Your job contains 1 sequence.
>psy8434
YSQVVLDVNRSLKRFPPGIPIEQRLALQDQLTLLILKVIHAYPRLRYYQGYHDVAITFLL
VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLER
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8434
(114 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0040005 - symbol:CG17883 species:7227 "Drosophila ... 307 2.2e-27 1
MGI|MGI:1914481 - symbol:Tbc1d20 "TBC1 domain family, mem... 272 1.1e-23 1
RGD|1303293 - symbol:Tbc1d20 "TBC1 domain family, member ... 269 2.6e-23 1
UNIPROTKB|Q96BZ9 - symbol:TBC1D20 "TBC1 domain family mem... 269 2.6e-23 1
UNIPROTKB|Q2T9Q1 - symbol:TBC1D20 "TBC1 domain family mem... 266 6.0e-23 1
ZFIN|ZDB-GENE-050626-61 - symbol:tbc1d20 "TBC1 domain fam... 264 9.1e-23 1
UNIPROTKB|F1NEC2 - symbol:TBC1D20 "Uncharacterized protei... 261 1.6e-22 1
ZFIN|ZDB-GENE-040426-1278 - symbol:zgc:63863 "zgc:63863" ... 261 2.2e-22 1
UNIPROTKB|J9P5A7 - symbol:TBC1D20 "Uncharacterized protei... 261 2.4e-22 1
UNIPROTKB|F1S7J4 - symbol:TBC1D20 "Uncharacterized protei... 145 8.0e-10 1
DICTYBASE|DDB_G0283055 - symbol:DDB_G0283055 "TBC1 domain... 147 1.2e-09 1
WB|WBGene00013196 - symbol:tbc-20 species:6239 "Caenorhab... 144 2.6e-09 1
POMBASE|SPBC651.03c - symbol:gyp10 "GTPase activating pro... 100 0.00013 1
>FB|FBgn0040005 [details] [associations]
symbol:CG17883 species:7227 "Drosophila melanogaster"
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
EMBL:AE013599 GO:GO:0005783 GO:GO:0005097 GO:GO:0032851
SUPFAM:SSF47923 GeneTree:ENSGT00390000014944 OMA:PEYNQVV
UniGene:Dm.29943 GeneID:3355139 KEGG:dme:Dmel_CG17883
FlyBase:FBgn0040005 GenomeRNAi:3355139 NextBio:850832 EMBL:AY113520
RefSeq:NP_001036448.1 DIP:DIP-23626N MINT:MINT-1656792
STRING:Q9W5H8 EnsemblMetazoa:FBtr0111291 UCSC:CG17883-RA
InParanoid:Q9W5H8 Uniprot:Q9W5H8
Length = 378
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 61/113 (53%), Positives = 77/113 (68%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
Y+QVVLDVNRSLKRFPPGIP E +VI YP LRYYQGYHDVA+TFLL
Sbjct: 90 YNQVVLDVNRSLKRFPPGIPYEQRIALQDQLTVLILRVIQKYPNLRYYQGYHDVAVTFLL 149
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLE 113
VVGE AF I+E LS H SE M++TM+ T L +++P++ + +L +FL+
Sbjct: 150 VVGEEIAFAIMEQLSTTHFSECMQETMEATQRRLMFIWPIIKFENPELYQFLQ 202
>MGI|MGI:1914481 [details] [associations]
symbol:Tbc1d20 "TBC1 domain family, member 20" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005096 "GTPase activator activity" evidence=IEA] [GO:0005097
"Rab GTPase activator activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0032313 "regulation of Rab GTPase
activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 MGI:MGI:1914481 GO:GO:0016021
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00390000014944 CTD:128637 HOGENOM:HOG000006927
HOVERGEN:HBG056376 OMA:ADFNAKR ChiTaRS:TBC1D20 EMBL:AK006877
EMBL:AK076124 EMBL:AK158274 EMBL:BC002196 EMBL:BC040089
IPI:IPI00323958 RefSeq:NP_077158.1 UniGene:Mm.288733
UniGene:Mm.490977 ProteinModelPortal:Q9D9I4 PhosphoSite:Q9D9I4
PaxDb:Q9D9I4 PRIDE:Q9D9I4 Ensembl:ENSMUST00000028963 GeneID:67231
KEGG:mmu:67231 eggNOG:NOG286275 InParanoid:Q9D9I4 NextBio:323958
Bgee:Q9D9I4 CleanEx:MM_TBC1D20 Genevestigator:Q9D9I4
GermOnline:ENSMUSG00000027465 Uniprot:Q9D9I4
Length = 402
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/113 (46%), Positives = 73/113 (64%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
Y QV+LDV RSL+RFPPG+P E V+ P+L YYQGYHD+ +TFLL
Sbjct: 95 YQQVLLDVRRSLRRFPPGMPDEQREGLQEELIDIILLVLDRNPQLHYYQGYHDIVVTFLL 154
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLE 113
VVGE A ++E LS HL + M TMD T ++LNY+ P++++ S +L +F++
Sbjct: 155 VVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVSPELHDFMQ 207
>RGD|1303293 [details] [associations]
symbol:Tbc1d20 "TBC1 domain family, member 20" species:10116
"Rattus norvegicus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
RGD:1303293 GO:GO:0005622 EMBL:CH474050 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00390000014944 CTD:128637 HOGENOM:HOG000006927
HOVERGEN:HBG056376 OMA:ADFNAKR OrthoDB:EOG4XKV7C EMBL:BC079383
IPI:IPI00357947 RefSeq:NP_001004281.1 UniGene:Rn.206296
Ensembl:ENSRNOT00000008713 GeneID:362237 KEGG:rno:362237
UCSC:RGD:1303293 InParanoid:Q6AXR1 NextBio:679146
Genevestigator:Q6AXR1 Uniprot:Q6AXR1
Length = 402
Score = 269 (99.8 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 51/113 (45%), Positives = 73/113 (64%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
Y QV+LDV RSL+RFPPG+P E V+ P+L YYQGYHD+ +TFLL
Sbjct: 95 YQQVLLDVRRSLRRFPPGMPDEQREGLQEELIDIILLVLDRNPQLHYYQGYHDIVVTFLL 154
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLE 113
VVGE A ++E LS HL + M TMD T ++LNY+ P++++ + +L +F++
Sbjct: 155 VVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQ 207
>UNIPROTKB|Q96BZ9 [details] [associations]
symbol:TBC1D20 "TBC1 domain family member 20" species:9606
"Homo sapiens" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 GO:GO:0016021 GO:GO:0019048
GO:GO:0005622 EMBL:CH471133 eggNOG:COG5210 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 EMBL:AL049761 EMBL:AL121747 PDB:4HLQ
PDBsum:4HLQ CTD:128637 HOGENOM:HOG000006927 HOVERGEN:HBG056376
OMA:ADFNAKR OrthoDB:EOG4XKV7C EMBL:AK055573 EMBL:AK127062
EMBL:AK291648 EMBL:BC014983 IPI:IPI00060314 IPI:IPI00140315
IPI:IPI00827616 RefSeq:NP_653229.1 UniGene:Hs.590876 PDB:4HL4
PDBsum:4HL4 ProteinModelPortal:Q96BZ9 STRING:Q96BZ9
PhosphoSite:Q96BZ9 DMDM:34395569 PaxDb:Q96BZ9 PRIDE:Q96BZ9
Ensembl:ENST00000354200 Ensembl:ENST00000461304 GeneID:128637
KEGG:hsa:128637 UCSC:uc002wds.3 GeneCards:GC20M000416
HGNC:HGNC:16133 HPA:HPA043613 MIM:611663 neXtProt:NX_Q96BZ9
PharmGKB:PA25683 PhylomeDB:Q96BZ9 ChiTaRS:TBC1D20 GenomeRNAi:128637
NextBio:82406 ArrayExpress:Q96BZ9 Bgee:Q96BZ9 CleanEx:HS_TBC1D20
Genevestigator:Q96BZ9 GermOnline:ENSG00000125875 Uniprot:Q96BZ9
Length = 403
Score = 269 (99.8 bits), Expect = 2.6e-23, P = 2.6e-23
Identities = 50/113 (44%), Positives = 73/113 (64%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
Y QV+LDV RSL+RFPPG+P E ++ P+L YYQGYHD+ +TFLL
Sbjct: 96 YQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLL 155
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLE 113
VVGE A ++E LS HL + M TMD T ++LNY+ P++++ + +L +F++
Sbjct: 156 VVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQ 208
>UNIPROTKB|Q2T9Q1 [details] [associations]
symbol:TBC1D20 "TBC1 domain family member 20" species:9913
"Bos taurus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 GO:GO:0016021 GO:GO:0005622
eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00390000014944 EMBL:BC111319 IPI:IPI00689361
RefSeq:NP_001033118.1 UniGene:Bt.13795 ProteinModelPortal:Q2T9Q1
PRIDE:Q2T9Q1 Ensembl:ENSBTAT00000017725 GeneID:504543
KEGG:bta:504543 CTD:128637 HOGENOM:HOG000006927 HOVERGEN:HBG056376
InParanoid:Q2T9Q1 OMA:ADFNAKR OrthoDB:EOG4XKV7C NextBio:20866716
Uniprot:Q2T9Q1
Length = 403
Score = 266 (98.7 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 49/113 (43%), Positives = 73/113 (64%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
Y QV+LDV RSL+RFPPG+P E ++ P+L YYQGYHD+ +TFLL
Sbjct: 96 YQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLL 155
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLE 113
V+GE A ++E LS HL + M TMD T ++LNY+ P++++ + +L +F++
Sbjct: 156 VLGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQ 208
>ZFIN|ZDB-GENE-050626-61 [details] [associations]
symbol:tbc1d20 "TBC1 domain family, member 20"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086
SMART:SM00164 ZFIN:ZDB-GENE-050626-61 GO:GO:0005622 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 CTD:128637 HOVERGEN:HBG056376
EMBL:BC096811 IPI:IPI00614133 RefSeq:NP_001020343.1
UniGene:Dr.47433 PRIDE:Q4QRJ8 GeneID:573993 KEGG:dre:573993
InParanoid:Q4QRJ8 NextBio:20891123 Bgee:Q4QRJ8 Uniprot:Q4QRJ8
Length = 397
Score = 264 (98.0 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 48/114 (42%), Positives = 75/114 (65%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
++QV+LDV RSL+RFPPG+P E +V+ P+L YYQGYHD+ +TFLL
Sbjct: 93 FNQVLLDVQRSLRRFPPGMPDEQREGLQEEPTDIILRVLVKNPQLHYYQGYHDIVVTFLL 152
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLER 114
V+GE A ++E LS HL + M TMD T ++LNY+ P++ + + ++ +F+++
Sbjct: 153 VLGERLATALVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIERVNPEVFDFMQQ 206
>UNIPROTKB|F1NEC2 [details] [associations]
symbol:TBC1D20 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005097 "Rab GTPase activator activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00390000014944 OMA:ADFNAKR EMBL:AADN02019111
IPI:IPI00577530 Ensembl:ENSGALT00000010006 Uniprot:F1NEC2
Length = 380
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 48/113 (42%), Positives = 73/113 (64%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
Y QV+LDV RSL+RFPPG+P + V+ P+L YYQGYHD+ +TFLL
Sbjct: 74 YQQVLLDVRRSLRRFPPGMPDDQREGLQEELIDIILHVLKRNPQLHYYQGYHDIVVTFLL 133
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLE 113
VVG+ A ++E LS HL + M TMD T ++LNY+ P++++ + ++ +F++
Sbjct: 134 VVGDRLATALVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPEVHDFMQ 186
>ZFIN|ZDB-GENE-040426-1278 [details] [associations]
symbol:zgc:63863 "zgc:63863" species:7955 "Danio
rerio" [GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0032313 "regulation
of Rab GTPase activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
ZFIN:ZDB-GENE-040426-1278 GO:GO:0005622 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 HOGENOM:HOG000006927
HOVERGEN:HBG056376 EMBL:BC054561 IPI:IPI00506044 RefSeq:NP_956695.1
UniGene:Dr.82376 ProteinModelPortal:Q7T2G2 GeneID:393372
KEGG:dre:393372 InParanoid:Q7T2G2 OrthoDB:EOG44MXSG
NextBio:20814421 Uniprot:Q7T2G2
Length = 399
Score = 261 (96.9 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 50/114 (43%), Positives = 70/114 (61%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
Y QVVLDV RS++RFP G+ ++ V+ P+L YYQGYHD+ +TFLL
Sbjct: 94 YRQVVLDVRRSMRRFPKGMRVDEREVLQEQLIDIILDVLRRNPQLHYYQGYHDIVVTFLL 153
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLER 114
V+GE I+E LSN HL + M TMD T ++LNY+ PL+ + +L +F+ R
Sbjct: 154 VLGERMTIAIMEKLSNHHLRDFMDPTMDSTKHILNYLMPLLERVDRELHDFMIR 207
>UNIPROTKB|J9P5A7 [details] [associations]
symbol:TBC1D20 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
GO:GO:0005622 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
GeneTree:ENSGT00390000014944 CTD:128637 OMA:ADFNAKR
EMBL:AAEX03013860 RefSeq:XP_861927.2 Ensembl:ENSCAFT00000045279
GeneID:485817 KEGG:cfa:485817 Uniprot:J9P5A7
Length = 403
Score = 261 (96.9 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 48/113 (42%), Positives = 72/113 (63%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
Y QV+LDV RSL+RFPPG+P + ++ P+L YYQGYHD+ +TFLL
Sbjct: 96 YQQVLLDVRRSLRRFPPGMPEKQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLL 155
Query: 61 VVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFLE 113
VVGE ++E LS HL + M TMD T ++LNY+ P++++ + +L +F++
Sbjct: 156 VVGERLTTSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQ 208
>UNIPROTKB|F1S7J4 [details] [associations]
symbol:TBC1D20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab
GTPase activator activity" evidence=IEA] InterPro:IPR000195
Pfam:PF00566 PROSITE:PS50086 GO:GO:0005622 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 GeneTree:ENSGT00390000014944
OMA:ADFNAKR EMBL:CU856069 Ensembl:ENSSSCT00000007884 Uniprot:F1S7J4
Length = 281
Score = 145 (56.1 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 38 VIHAYPRLRYYQGY-HDVAITFLLVVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNY 96
++ +P LRYYQGY V TFLL VG+ A + LS HL + M TMD T+ +LNY
Sbjct: 9 ILERHPHLRYYQGYLRRVVSTFLLSVGDTLATSPGK-LSTHHLMDFMDPTMDNTTLILNY 67
Query: 97 MFPLVNKRSSDLCEFLE 113
+ P++++ + +L +F++
Sbjct: 68 LMPIIDQVNPELHDFMQ 84
>DICTYBASE|DDB_G0283055 [details] [associations]
symbol:DDB_G0283055 "TBC1 domain family protein"
species:44689 "Dictyostelium discoideum" [GO:0032851 "positive
regulation of Rab GTPase activity" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005097 "Rab GTPase activator
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000195 Pfam:PF00566 PROSITE:PS50086 SMART:SM00164
dictyBase:DDB_G0283055 GO:GO:0005622 EMBL:AAFI02000049
eggNOG:COG5210 GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923
RefSeq:XP_639266.1 ProteinModelPortal:Q54RT5
EnsemblProtists:DDB0234040 GeneID:8623835 KEGG:ddi:DDB_G0283055
InParanoid:Q54RT5 OMA:PEYNQVV ProtClustDB:CLSZ2430402
Uniprot:Q54RT5
Length = 400
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/110 (33%), Positives = 54/110 (49%)
Query: 3 QVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLLVV 62
QV DV RS+ RF G + V+ +P+L Y+QGYH++A LL+
Sbjct: 76 QVTKDVERSMWRFTKGNS-QLRNRKKPELTRIVNAVLSIHPQLYYFQGYHEIASVLLLIS 134
Query: 63 GEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYMFPLVNKRSSDLCEFL 112
E AF +LE LS H ++ M E VLN +FPL++ + F+
Sbjct: 135 DESLAFAMLERLSIYHFNDCMLPNFAEVLKVLNLIFPLISMVDQHVYNFI 184
>WB|WBGene00013196 [details] [associations]
symbol:tbc-20 species:6239 "Caenorhabditis elegans"
[GO:0005097 "Rab GTPase activator activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0032313 "regulation
of Rab GTPase activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 GO:GO:0005622 GO:GO:0005097
GO:GO:0032851 SUPFAM:SSF47923 EMBL:AL032646
GeneTree:ENSGT00390000014944 eggNOG:NOG286275 PIR:T27152
RefSeq:NP_497068.2 ProteinModelPortal:Q9XWI2 PaxDb:Q9XWI2
EnsemblMetazoa:Y54E2A.12 GeneID:175139 KEGG:cel:CELE_Y54E2A.12
UCSC:Y54E2A.12 CTD:175139 WormBase:Y54E2A.12 HOGENOM:HOG000017429
InParanoid:Q9XWI2 NextBio:886932 Uniprot:Q9XWI2
Length = 411
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 1 YSQVVLDVNRSLKRFPPGIPIEXXXXXXXXXXXXXXKVIHAYPRLRYYQGYHDVAITFLL 60
++QV LDV+R+L RFPP I +V+ PR YYQG+HD+ +T LL
Sbjct: 146 WNQVELDVHRTLSRFPPNISDTHRDVLQTELIPLIVRVLSINPRFNYYQGFHDICLTVLL 205
Query: 61 VVGEMKAFRILEVLS-NDHLSENMRDTMDET 90
V GE+ A + L+ N + + T++++
Sbjct: 206 VCGEVDALPVCSNLAKNGSFNNYLLKTLEKS 236
>POMBASE|SPBC651.03c [details] [associations]
symbol:gyp10 "GTPase activating protein Gyp10"
species:4896 "Schizosaccharomyces pombe" [GO:0000920 "cytokinetic
cell separation" evidence=IGI] [GO:0005097 "Rab GTPase activator
activity" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IGI] [GO:0032313 "regulation of Rab GTPase activity"
evidence=ISM] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IGI] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 PomBase:SPBC651.03c GO:GO:0005783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005634 GO:GO:0016192
GO:GO:0005789 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000920
GO:GO:0035023 eggNOG:COG5210 GO:GO:0005097 SUPFAM:SSF47923
PIR:T40602 RefSeq:NP_595501.1 ProteinModelPortal:O94661
STRING:O94661 EnsemblFungi:SPBC651.03c.1 GeneID:2541149
KEGG:spo:SPBC651.03c OMA:NTWHILN OrthoDB:EOG49KK0G NextBio:20802262
Uniprot:O94661
Length = 373
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 38 VIHAYPRLRYYQGYHDVAITFLLVVGEMKAFRILEVLSNDHLSENMRDTMDETSYVLNYM 97
V YP L YYQG HD+A LL + A ++E L L + M T+D T L +
Sbjct: 107 VFKHYPELCYYQGLHDIAQILLLTLPFSHALPLMEHLVFYRLRDFMLPTLDGTVKQLQLI 166
Query: 98 FPLVNKRSSDLCEFL 112
++ R L E+L
Sbjct: 167 LAVIKARDPTLYEYL 181
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.141 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 114 100 0.00091 102 3 11 22 0.49 29
29 0.47 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 535 (57 KB)
Total size of DFA: 106 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.53u 0.08s 10.61t Elapsed: 00:00:05
Total cpu time: 10.53u 0.08s 10.61t Elapsed: 00:00:05
Start: Thu Aug 15 13:25:58 2013 End: Thu Aug 15 13:26:03 2013