Query psy8436
Match_columns 306
No_of_seqs 204 out of 2163
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 18:48:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8436.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8436hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gsl_A Disks large homolog 4; 100.0 3.8E-30 1.3E-34 213.4 23.0 177 2-305 3-184 (196)
2 3r0h_A INAD, inactivation-NO-a 100.0 1.7E-29 5.8E-34 211.3 22.5 170 4-305 18-190 (206)
3 2qt5_A Glutamate receptor-inte 100.0 9.8E-28 3.4E-32 199.6 23.5 182 4-305 7-189 (200)
4 1p1d_A PDZ45, glutamate recept 100.0 7.2E-27 2.5E-31 193.7 21.8 181 3-305 5-189 (196)
5 2xkx_A Disks large homolog 4; 99.9 1.6E-26 5.4E-31 226.0 21.9 171 3-299 58-233 (721)
6 2xkx_A Disks large homolog 4; 99.9 2E-23 7E-28 204.1 27.5 227 5-304 155-384 (721)
7 3suz_A Amyloid beta A4 precurs 99.9 2E-26 6.7E-31 209.8 5.4 161 3-301 203-365 (388)
8 1w9e_A Syntenin 1; cell adhesi 99.9 1.3E-22 4.4E-27 163.6 21.6 151 4-299 4-155 (166)
9 3rle_A Golgi reassembly-stacki 99.8 1.8E-19 6E-24 150.5 16.0 157 17-305 3-164 (209)
10 3gge_A PDZ domain-containing p 99.8 5.4E-19 1.9E-23 126.4 11.4 86 4-94 5-92 (95)
11 1r6j_A Syntenin 1; PDZ, membra 99.8 1.7E-18 5.7E-23 121.6 10.8 77 4-90 4-80 (82)
12 3gge_A PDZ domain-containing p 99.8 5.2E-18 1.8E-22 121.3 11.8 78 218-302 3-80 (95)
13 3b76_A E3 ubiquitin-protein li 99.8 7.1E-18 2.4E-22 127.5 12.2 89 4-92 24-113 (118)
14 3cbz_A Dishevelled-2; PDZ doma 99.8 2.9E-18 1E-22 127.8 8.9 90 4-93 5-97 (108)
15 2vwr_A Ligand of NUMB protein 99.7 1.8E-17 6.1E-22 120.7 12.5 89 2-93 1-90 (95)
16 3o46_A Maguk P55 subfamily mem 99.7 1.7E-17 5.7E-22 120.3 11.7 88 1-92 1-88 (93)
17 2iwo_A Multiple PDZ domain pro 99.7 6.1E-18 2.1E-22 128.4 9.6 91 3-93 23-114 (120)
18 2qg1_A Multiple PDZ domain pro 99.7 2.6E-17 8.9E-22 119.1 12.0 87 3-92 3-89 (92)
19 1wi4_A Synip, syntaxin binding 99.7 1.9E-17 6.5E-22 123.6 11.3 88 3-92 14-105 (109)
20 4a8c_A Periplasmic PH-dependen 99.7 6.7E-17 2.3E-21 149.2 17.3 59 32-93 263-323 (436)
21 1kwa_A Hcask/LIN-2 protein; PD 99.7 1.9E-17 6.5E-22 118.7 10.4 85 4-92 1-85 (88)
22 2dc2_A GOPC, golgi associated 99.7 1.7E-17 5.9E-22 122.6 10.5 89 4-94 9-97 (103)
23 4e34_A Golgi-associated PDZ an 99.7 1.9E-17 6.5E-22 118.5 10.3 84 4-90 2-86 (87)
24 2d92_A INAD-like protein; PDZ 99.7 2.1E-17 7.1E-22 123.3 10.9 90 2-92 13-105 (108)
25 1qav_A Alpha-1 syntrophin (res 99.7 2.8E-17 9.7E-22 118.4 11.2 88 2-91 2-89 (90)
26 2yt7_A Amyloid beta A4 precurs 99.7 5.5E-17 1.9E-21 119.4 12.8 91 2-92 7-99 (101)
27 2i1n_A Discs, large homolog 3; 99.7 5.6E-17 1.9E-21 119.6 12.5 92 2-94 2-96 (102)
28 2fe5_A Presynaptic protein SAP 99.7 6.7E-17 2.3E-21 117.4 12.7 88 4-92 3-93 (94)
29 3l4f_D SH3 and multiple ankyri 99.7 5.3E-17 1.8E-21 125.3 12.8 91 2-93 25-125 (132)
30 1i16_A Interleukin 16, LCF; cy 99.7 4.3E-17 1.5E-21 125.6 12.1 86 218-305 27-112 (130)
31 1ihj_A INAD; intermolecular di 99.7 3.8E-17 1.3E-21 119.6 11.1 90 3-92 4-97 (98)
32 2awx_A Synapse associated prot 99.7 6.8E-17 2.3E-21 119.8 12.6 91 3-94 2-95 (105)
33 2byg_A Channel associated prot 99.7 5.8E-17 2E-21 122.5 12.3 89 3-92 23-114 (117)
34 2db5_A INAD-like protein; PDZ 99.7 3.9E-17 1.3E-21 125.6 11.3 92 3-94 24-117 (128)
35 2jik_A Synaptojanin-2 binding 99.7 9.2E-17 3.2E-21 118.2 12.7 89 4-93 7-98 (101)
36 1uhp_A Hypothetical protein KI 99.7 8.5E-17 2.9E-21 119.7 12.5 91 2-93 6-102 (107)
37 2he4_A Na(+)/H(+) exchange reg 99.7 1E-16 3.5E-21 115.4 12.5 86 2-92 2-87 (90)
38 1i16_A Interleukin 16, LCF; cy 99.7 2.5E-17 8.5E-22 127.0 9.7 91 2-93 27-119 (130)
39 1ujd_A KIAA0559 protein; PDZ d 99.7 6.8E-17 2.3E-21 122.2 11.8 91 4-94 12-111 (117)
40 1m5z_A GRIP, AMPA receptor int 99.7 1.3E-16 4.4E-21 115.1 12.5 85 3-91 5-90 (91)
41 1n7e_A AMPA receptor interacti 99.7 1.7E-16 5.9E-21 115.9 13.1 89 2-93 3-91 (97)
42 2ehr_A INAD-like protein; PDZ 99.7 6.5E-17 2.2E-21 122.3 11.0 91 3-93 14-111 (117)
43 1v62_A KIAA1719 protein; struc 99.7 1.2E-16 4.1E-21 120.8 12.4 91 3-94 14-104 (117)
44 3hpk_A Protein interacting wit 99.7 1.2E-16 4.2E-21 122.3 12.6 87 4-92 19-105 (125)
45 2ejy_A 55 kDa erythrocyte memb 99.7 6.5E-17 2.2E-21 117.7 10.4 85 3-91 11-95 (97)
46 1ueq_A Membrane associated gua 99.7 3.2E-16 1.1E-20 119.6 14.7 90 2-94 17-108 (123)
47 3nfk_A Tyrosine-protein phosph 99.7 5.6E-17 1.9E-21 120.7 10.0 87 3-91 16-107 (107)
48 1d5g_A Human phosphatase HPTP1 99.7 2.2E-16 7.6E-21 115.1 12.9 89 3-92 4-93 (96)
49 3i4w_A Disks large homolog 4; 99.7 1.4E-16 4.7E-21 117.9 11.9 87 2-92 9-95 (104)
50 1ufx_A KIAA1526 protein; PDZ d 99.7 7E-17 2.4E-21 119.2 9.9 89 3-93 5-98 (103)
51 2dkr_A LIN-7 homolog B; LIN-7B 99.7 1.1E-16 3.8E-21 115.9 10.8 87 3-92 4-90 (93)
52 1wf8_A Neurabin-I; PDZ domain, 99.7 1.3E-16 4.4E-21 118.7 11.0 90 3-93 8-101 (107)
53 1wi4_A Synip, syntaxin binding 99.7 1.6E-16 5.6E-21 118.5 11.5 83 219-305 14-99 (109)
54 1wi2_A Riken cDNA 2700099C19; 99.7 1.9E-16 6.4E-21 117.2 11.7 87 3-93 14-100 (104)
55 2fne_A Multiple PDZ domain pro 99.7 7.4E-17 2.5E-21 121.9 9.7 89 4-93 25-114 (117)
56 3egg_C Spinophilin; PP1, serin 99.7 1.5E-16 5.1E-21 127.8 11.9 88 3-91 79-170 (170)
57 2ego_A General receptor for ph 99.7 2.1E-16 7.3E-21 115.1 11.6 88 3-91 3-95 (96)
58 2o2t_A Multiple PDZ domain pro 99.7 6.6E-17 2.2E-21 122.3 9.2 91 3-93 19-111 (117)
59 2q9v_A Membrane-associated gua 99.7 1.3E-16 4.4E-21 114.9 10.2 85 4-91 2-88 (90)
60 3axa_A Afadin, nectin-3, prote 99.7 2.8E-16 9.6E-21 116.7 12.3 90 3-94 10-100 (106)
61 2r4h_A Membrane-associated gua 99.7 2.1E-16 7.1E-21 118.6 11.7 87 3-92 23-109 (112)
62 1g9o_A NHE-RF; PDZ domain, com 99.7 4.4E-16 1.5E-20 112.3 12.9 84 4-92 3-86 (91)
63 3pv2_A DEGQ; trypsin fold, PDZ 99.7 1.2E-16 4.2E-21 147.9 12.4 59 32-93 282-342 (451)
64 1uep_A Membrane associated gua 99.7 7.1E-17 2.4E-21 119.3 8.6 89 2-93 7-97 (103)
65 4amh_A Disks large homolog 1; 99.7 2.3E-16 7.8E-21 117.1 11.4 84 10-93 7-93 (106)
66 1wfg_A Regulating synaptic mem 99.7 2E-16 6.8E-21 122.0 11.5 89 4-92 27-127 (131)
67 1r6j_A Syntenin 1; PDZ, membra 99.7 1.8E-16 6E-21 111.2 10.1 73 220-305 4-76 (82)
68 1wha_A KIAA0147 protein, scrib 99.7 2.1E-16 7.3E-21 117.1 11.1 91 2-93 5-99 (105)
69 3b76_A E3 ubiquitin-protein li 99.7 2.2E-16 7.4E-21 119.4 11.1 85 219-305 23-107 (118)
70 2h2b_A Tight junction protein 99.7 5.7E-16 2E-20 115.2 13.2 92 1-94 4-99 (107)
71 2i04_A Membrane-associated gua 99.7 4.7E-16 1.6E-20 110.7 11.9 81 7-90 3-85 (85)
72 2daz_A INAD-like protein; PDZ 99.7 3.1E-16 1.1E-20 119.8 11.7 91 2-94 23-113 (124)
73 1nf3_C PAR-6B; semi-CRIB motif 99.7 1.8E-16 6.1E-21 121.8 10.3 91 2-92 27-125 (128)
74 2eno_A Synaptojanin-2-binding 99.7 3.4E-16 1.2E-20 118.9 11.6 90 3-93 16-108 (120)
75 1uju_A Scribble; PDZ domain, c 99.7 5E-17 1.7E-21 121.8 6.8 90 4-93 9-105 (111)
76 2pa1_A PDZ and LIM domain prot 99.7 4.5E-16 1.6E-20 111.2 11.4 83 7-92 3-85 (87)
77 1um1_A KIAA1849 protein, RSGI 99.7 5.9E-16 2E-20 115.7 12.6 90 3-93 7-97 (110)
78 2q3g_A PDZ and LIM domain prot 99.7 2.7E-16 9.1E-21 113.0 10.2 81 7-92 6-86 (89)
79 2cs5_A Tyrosine-protein phosph 99.7 9.1E-17 3.1E-21 121.9 8.1 90 2-93 13-107 (119)
80 2kpk_A Membrane-associated gua 99.7 8.1E-16 2.8E-20 118.3 13.5 90 2-94 16-107 (129)
81 2qkv_A Inactivation-NO-after-p 99.7 4.1E-16 1.4E-20 113.6 11.2 87 2-93 6-92 (96)
82 1q3o_A Shank1; PDZ, GKAP, pept 99.7 5.1E-16 1.7E-20 115.9 11.9 89 4-93 7-105 (109)
83 2jil_A GRIP1 protein, glutamat 99.7 4.3E-16 1.5E-20 113.8 11.1 89 4-93 3-93 (97)
84 2csj_A TJP2 protein; PDZ domai 99.7 2.2E-16 7.6E-21 119.4 9.9 89 3-93 13-105 (117)
85 2la8_A Inactivation-NO-after-p 99.7 3.2E-16 1.1E-20 116.2 10.4 85 4-93 2-86 (106)
86 1wg6_A Hypothetical protein (r 99.7 1E-16 3.5E-21 122.9 7.9 89 5-93 26-123 (127)
87 2opg_A Multiple PDZ domain pro 99.7 8.7E-16 3E-20 112.3 12.6 89 4-94 4-92 (98)
88 2v90_A PDZ domain-containing p 99.7 5.9E-16 2E-20 112.8 11.4 89 4-94 3-91 (96)
89 1x6d_A Interleukin-16; PDZ dom 99.7 5E-16 1.7E-20 117.8 11.4 91 3-94 14-105 (119)
90 2djt_A Unnamed protein product 99.7 3.8E-16 1.3E-20 115.6 10.5 92 2-94 9-100 (104)
91 3qe1_A Sorting nexin-27, G pro 99.7 8E-16 2.7E-20 114.4 12.2 89 3-93 5-103 (107)
92 2f5y_A Regulator of G-protein 99.7 6.3E-16 2.2E-20 111.5 11.2 83 4-94 3-85 (91)
93 1va8_A Maguk P55 subfamily mem 99.7 9.1E-16 3.1E-20 115.2 12.0 86 3-93 24-109 (113)
94 2g5m_B Neurabin-2; spinophilin 99.7 3.2E-16 1.1E-20 117.8 9.4 92 2-94 2-97 (113)
95 3e17_A Tight junction protein 99.7 5.1E-16 1.7E-20 111.2 9.8 77 8-92 4-81 (88)
96 2dlu_A INAD-like protein; PDZ 99.7 7.7E-16 2.6E-20 115.3 11.2 86 4-94 15-100 (111)
97 2dmz_A INAD-like protein; PDZ 99.7 1.6E-15 5.5E-20 116.7 13.3 93 2-94 13-108 (129)
98 1q7x_A PDZ2B domain of PTP-BAS 99.7 4.5E-16 1.5E-20 116.0 9.7 90 3-93 8-103 (108)
99 2e7k_A Maguk P55 subfamily mem 99.7 2.8E-16 9.7E-21 113.3 8.3 84 2-91 4-87 (91)
100 3ngh_A PDZ domain-containing p 99.7 5.9E-16 2E-20 114.9 10.2 84 5-92 2-85 (106)
101 2d92_A INAD-like protein; PDZ 99.7 9.1E-16 3.1E-20 114.3 11.2 85 219-305 14-99 (108)
102 2vsp_A PDZ domain-containing p 99.7 1.7E-16 6E-21 114.4 7.0 85 4-93 3-87 (91)
103 2jre_A C60-1 PDZ domain peptid 99.7 1.1E-15 3.8E-20 113.9 11.6 92 2-93 10-105 (108)
104 2uzc_A Human pdlim5, PDZ and L 99.7 8.8E-16 3E-20 110.0 10.6 83 5-92 4-86 (88)
105 3r68_A Na(+)/H(+) exchange reg 99.7 7.6E-16 2.6E-20 111.9 10.4 85 4-93 5-89 (95)
106 1z87_A Alpha-1-syntrophin; pro 99.7 1.9E-16 6.4E-21 135.4 8.1 90 3-94 76-165 (263)
107 2iwo_A Multiple PDZ domain pro 99.6 2.2E-16 7.4E-21 119.8 7.5 85 219-305 23-107 (120)
108 1mfg_A ERB-B2 interacting prot 99.6 2.1E-15 7.2E-20 109.6 12.1 84 5-92 4-93 (95)
109 1uew_A Membrane associated gua 99.6 2.4E-15 8.1E-20 113.2 12.7 91 3-94 9-105 (114)
110 3cbz_A Dishevelled-2; PDZ doma 99.6 4.4E-16 1.5E-20 116.0 8.4 85 219-305 4-90 (108)
111 1tp5_A Presynaptic density pro 99.6 1.6E-15 5.4E-20 115.0 11.6 88 2-93 12-99 (119)
112 1kwa_A Hcask/LIN-2 protein; PD 99.6 9.5E-16 3.2E-20 109.8 9.7 78 221-305 2-79 (88)
113 1d5g_A Human phosphatase HPTP1 99.6 2.4E-15 8.4E-20 109.5 12.0 84 219-305 4-87 (96)
114 2eeh_A PDZ domain-containing p 99.6 1.6E-15 5.3E-20 111.4 11.0 88 3-94 9-96 (100)
115 1v6b_A Harmonin isoform A1; st 99.6 1.4E-15 4.8E-20 115.1 11.0 89 3-94 17-109 (118)
116 2d90_A PDZ domain containing p 99.6 1.2E-15 4E-20 112.5 10.3 86 3-93 5-90 (102)
117 1rgw_A ZAsp protein; PDZ, cyph 99.6 1.2E-15 4E-20 108.6 9.6 82 6-92 3-84 (85)
118 3soe_A Membrane-associated gua 99.6 2.6E-15 8.8E-20 111.5 11.8 83 3-94 11-95 (113)
119 2gzv_A PRKCA-binding protein; 99.6 3.1E-15 1E-19 112.4 12.2 87 3-91 23-109 (114)
120 2fcf_A Multiple PDZ domain pro 99.6 2.8E-15 9.7E-20 110.6 11.7 89 5-93 5-100 (103)
121 1n7t_A 99-MER peptide of densi 99.6 1.9E-15 6.6E-20 111.5 10.6 86 3-92 10-101 (103)
122 2eei_A PDZ domain-containing p 99.6 6E-16 2E-20 114.9 7.9 88 2-94 6-93 (106)
123 2w4f_A Protein LAP4; structura 99.6 5.5E-15 1.9E-19 107.8 12.5 87 5-93 4-94 (97)
124 1x5q_A LAP4 protein; PDZ domai 99.6 6.8E-15 2.3E-19 109.9 13.2 90 2-93 13-106 (110)
125 2iwq_A Multiple PDZ domain pro 99.6 3.6E-15 1.2E-19 113.5 11.8 89 5-93 25-120 (123)
126 2kv8_A RGS12, regulator of G-p 99.6 5.3E-16 1.8E-20 109.9 6.6 80 4-91 2-81 (83)
127 2pkt_A PDZ and LIM domain prot 99.6 3.3E-15 1.1E-19 107.6 10.8 83 6-93 5-87 (91)
128 1ufx_A KIAA1526 protein; PDZ d 99.6 1.4E-15 4.7E-20 112.2 8.8 74 221-298 7-80 (103)
129 2fne_A Multiple PDZ domain pro 99.6 9.1E-16 3.1E-20 115.8 8.0 84 219-305 24-107 (117)
130 2i1n_A Discs, large homolog 3; 99.6 5E-15 1.7E-19 109.1 11.8 84 219-305 3-88 (102)
131 1ueq_A Membrane associated gua 99.6 8.7E-15 3E-19 111.6 13.5 85 216-305 15-100 (123)
132 2dls_A PDZ-rhogef, RHO guanine 99.6 6.4E-15 2.2E-19 106.6 12.1 81 4-93 8-88 (93)
133 1um1_A KIAA1849 protein, RSGI 99.6 5.7E-15 2E-19 110.3 12.2 85 218-305 6-90 (110)
134 2fe5_A Presynaptic protein SAP 99.6 5.5E-15 1.9E-19 107.2 11.7 84 219-305 2-87 (94)
135 3k1r_A Harmonin; protein-prote 99.6 2.5E-15 8.6E-20 123.6 11.0 88 3-94 83-170 (192)
136 3sfj_A TAX1-binding protein 3; 99.6 5.2E-15 1.8E-19 109.4 11.5 89 2-91 2-104 (104)
137 1wfg_A Regulating synaptic mem 99.6 2.7E-15 9.4E-20 115.5 10.3 86 220-305 27-121 (131)
138 2edp_A Fragment, shroom family 99.6 1.2E-15 4E-20 112.1 7.7 89 2-93 7-95 (100)
139 3kzd_A TIAM-1, T-lymphoma inva 99.6 7E-15 2.4E-19 105.6 11.6 88 1-92 3-92 (94)
140 1g9o_A NHE-RF; PDZ domain, com 99.6 4.8E-15 1.6E-19 106.8 10.8 77 220-303 3-79 (91)
141 2vwr_A Ligand of NUMB protein 99.6 7.1E-15 2.4E-19 106.8 11.7 82 219-305 2-83 (95)
142 1v5q_A GRIP1 homolog, glutamat 99.6 3.3E-15 1.1E-19 113.7 10.4 93 2-94 13-109 (122)
143 2db5_A INAD-like protein; PDZ 99.6 1.6E-15 5.6E-20 116.5 8.6 85 219-305 24-109 (128)
144 2awx_A Synapse associated prot 99.6 5.7E-15 1.9E-19 109.4 11.2 83 220-305 3-87 (105)
145 3bpu_A Membrane-associated gua 99.6 6.3E-15 2.2E-19 105.5 11.1 82 4-92 3-86 (88)
146 2byg_A Channel associated prot 99.6 6.2E-15 2.1E-19 111.3 11.5 84 219-305 23-108 (117)
147 2koj_A Partitioning defective 99.6 1.4E-14 4.7E-19 108.4 13.3 91 4-95 11-104 (111)
148 2q9v_A Membrane-associated gua 99.6 3E-15 1E-19 107.6 9.3 81 220-305 2-83 (90)
149 3egg_C Spinophilin; PP1, serin 99.6 5E-15 1.7E-19 118.9 11.4 84 219-305 79-165 (170)
150 2jik_A Synaptojanin-2 binding 99.6 8.7E-15 3E-19 107.6 11.7 84 219-305 6-91 (101)
151 1wfv_A Membrane associated gua 99.6 7.6E-16 2.6E-20 113.7 6.0 88 3-93 10-97 (103)
152 2dc2_A GOPC, golgi associated 99.6 3E-15 1E-19 110.4 9.0 82 219-305 8-89 (103)
153 1wf8_A Neurabin-I; PDZ domain, 99.6 5.4E-15 1.8E-19 109.9 10.4 85 218-305 7-94 (107)
154 2eeg_A PDZ and LIM domain prot 99.6 3.9E-15 1.3E-19 108.0 9.4 83 5-92 9-91 (94)
155 1vb7_A PDZ and LIM domain 2; P 99.6 1.8E-15 6.1E-20 109.8 7.6 84 7-93 7-90 (94)
156 2i04_A Membrane-associated gua 99.6 9.3E-15 3.2E-19 103.9 11.2 79 222-305 2-81 (85)
157 2iwn_A Multiple PDZ domain pro 99.6 9.5E-15 3.2E-19 106.5 11.5 89 3-92 3-93 (97)
158 1ujd_A KIAA0559 protein; PDZ d 99.6 4.9E-15 1.7E-19 111.9 10.2 87 218-305 10-103 (117)
159 1x6d_A Interleukin-16; PDZ dom 99.6 1.1E-14 3.7E-19 110.4 11.9 83 219-304 14-96 (119)
160 2dm8_A INAD-like protein; PDZ 99.6 3.1E-15 1.1E-19 112.9 8.8 90 4-95 17-106 (116)
161 2qg1_A Multiple PDZ domain pro 99.6 1.2E-14 4.2E-19 104.9 11.5 81 219-305 3-83 (92)
162 3o46_A Maguk P55 subfamily mem 99.6 9.4E-15 3.2E-19 105.7 10.9 79 220-305 4-82 (93)
163 2ejy_A 55 kDa erythrocyte memb 99.6 5.9E-15 2E-19 107.2 9.7 78 221-305 13-90 (97)
164 1wha_A KIAA0147 protein, scrib 99.6 6.8E-15 2.3E-19 108.9 10.2 84 219-305 6-92 (105)
165 1um7_A Synapse-associated prot 99.6 1.9E-15 6.6E-20 113.4 7.2 88 2-93 13-100 (113)
166 1uep_A Membrane associated gua 99.6 3.4E-15 1.2E-19 110.2 8.4 83 218-305 7-90 (103)
167 3axa_A Afadin, nectin-3, prote 99.6 8.9E-15 3E-19 108.5 10.7 83 219-305 10-92 (106)
168 2edz_A PDZ domain-containing p 99.6 6.2E-15 2.1E-19 110.8 9.9 85 4-92 13-97 (114)
169 1wf7_A Enigma homologue protei 99.6 3.1E-15 1E-19 110.4 8.0 86 4-94 5-90 (103)
170 1qav_A Alpha-1 syntrophin (res 99.6 6.7E-15 2.3E-19 105.8 9.6 82 219-305 3-84 (90)
171 1wg6_A Hypothetical protein (r 99.6 2.5E-15 8.5E-20 115.2 7.6 77 221-298 26-103 (127)
172 2ehr_A INAD-like protein; PDZ 99.6 1.8E-14 6E-19 108.9 12.1 85 219-305 14-104 (117)
173 2vsv_A Rhophilin-2; scaffold p 99.6 6.9E-15 2.4E-19 109.2 9.6 83 3-93 22-105 (109)
174 1uhp_A Hypothetical protein KI 99.6 2E-14 6.9E-19 106.8 12.1 85 218-305 6-95 (107)
175 4e34_A Golgi-associated PDZ an 99.6 6.9E-15 2.3E-19 105.0 9.1 80 221-305 3-82 (87)
176 3khf_A Microtubule-associated 99.6 1.1E-14 3.9E-19 106.6 10.3 85 7-93 5-94 (99)
177 2o2t_A Multiple PDZ domain pro 99.6 4.6E-15 1.6E-19 112.1 8.4 85 219-305 19-104 (117)
178 2jil_A GRIP1 protein, glutamat 99.6 1.3E-14 4.4E-19 105.8 10.5 83 220-305 3-86 (97)
179 2he4_A Na(+)/H(+) exchange reg 99.6 1.6E-14 5.4E-19 103.8 10.8 78 220-305 4-81 (90)
180 2kpk_A Membrane-associated gua 99.6 1.1E-14 3.8E-19 111.9 10.6 86 215-305 13-99 (129)
181 1uez_A KIAA1526 protein; PDZ d 99.6 5.1E-15 1.8E-19 108.8 8.3 88 3-94 7-95 (101)
182 2lob_A Golgi-associated PDZ an 99.4 1.6E-16 5.3E-21 119.1 0.0 83 4-89 27-110 (112)
183 1q7x_A PDZ2B domain of PTP-BAS 99.6 1E-14 3.5E-19 108.6 9.9 84 219-305 8-96 (108)
184 3l4f_D SH3 and multiple ankyri 99.6 1.8E-14 6E-19 111.1 11.4 83 220-305 27-118 (132)
185 2jxo_A Ezrin-radixin-moesin-bi 99.6 1.6E-14 5.6E-19 105.5 10.7 83 4-91 9-92 (98)
186 1m5z_A GRIP, AMPA receptor int 99.6 3.5E-14 1.2E-18 102.2 12.2 81 219-305 5-85 (91)
187 2eno_A Synaptojanin-2-binding 99.6 2.6E-14 8.7E-19 108.5 11.9 84 219-305 16-101 (120)
188 2g5m_B Neurabin-2; spinophilin 99.6 9.2E-15 3.1E-19 109.7 9.3 84 219-305 3-89 (113)
189 2z17_A Pleckstrin homology SEC 99.6 8.8E-15 3E-19 108.1 9.0 83 5-88 16-103 (104)
190 2ego_A General receptor for ph 99.6 2.2E-14 7.5E-19 104.4 10.9 80 220-305 4-90 (96)
191 3hpk_A Protein interacting wit 99.6 2.5E-14 8.5E-19 109.3 11.7 82 219-305 18-99 (125)
192 2jre_A C60-1 PDZ domain peptid 99.6 2.6E-14 8.9E-19 106.3 11.4 86 219-305 11-98 (108)
193 1ihj_A INAD; intermolecular di 99.6 1.4E-14 4.8E-19 105.8 9.7 83 221-305 6-91 (98)
194 2kom_A Partitioning defective 99.6 4.6E-14 1.6E-18 107.1 12.8 87 5-92 31-120 (121)
195 1y7n_A Amyloid beta A4 precurs 99.6 3.1E-14 1.1E-18 102.1 11.2 77 4-90 12-88 (90)
196 2opg_A Multiple PDZ domain pro 99.6 3.4E-14 1.2E-18 103.7 11.6 82 219-305 3-84 (98)
197 2dmz_A INAD-like protein; PDZ 99.6 3E-14 1E-18 109.5 11.7 86 218-305 13-100 (129)
198 2dkr_A LIN-7 homolog B; LIN-7B 99.6 2.2E-14 7.5E-19 103.7 10.2 80 220-305 5-84 (93)
199 1wi2_A Riken cDNA 2700099C19; 99.6 5.1E-14 1.7E-18 104.0 12.3 80 219-305 14-93 (104)
200 4amh_A Disks large homolog 1; 99.6 1.8E-14 6.3E-19 106.7 9.9 73 232-305 12-86 (106)
201 1uit_A Human discs large 5 pro 99.6 3.4E-14 1.2E-18 107.3 11.4 86 4-95 19-104 (117)
202 1uju_A Scribble; PDZ domain, c 99.6 8E-15 2.8E-19 109.7 7.8 83 221-305 10-98 (111)
203 2yt7_A Amyloid beta A4 precurs 99.6 3.9E-14 1.3E-18 104.0 11.3 85 219-305 8-93 (101)
204 1x5n_A Harmonin; PDZ domain, u 99.6 2.6E-14 9E-19 107.4 10.5 86 2-91 13-98 (114)
205 3e17_A Tight junction protein 99.5 2.8E-14 9.7E-19 102.0 10.0 73 223-305 3-75 (88)
206 2koj_A Partitioning defective 99.5 6.7E-14 2.3E-18 104.6 12.2 85 219-305 10-95 (111)
207 1ky9_A Protease DO, DEGP, HTRA 99.5 6.1E-16 2.1E-20 143.1 1.2 59 32-93 286-346 (448)
208 2vz5_A TAX1-binding protein 3; 99.5 4.1E-14 1.4E-18 110.0 11.4 92 2-94 21-126 (139)
209 3nfk_A Tyrosine-protein phosph 99.5 1.7E-14 5.8E-19 107.2 8.8 78 219-300 16-94 (107)
210 1n7e_A AMPA receptor interacti 99.5 6.4E-14 2.2E-18 102.1 11.8 81 219-305 4-84 (97)
211 1qau_A Neuronal nitric oxide s 99.5 6.7E-14 2.3E-18 104.8 12.2 86 5-94 2-89 (112)
212 2daz_A INAD-like protein; PDZ 99.5 3.8E-14 1.3E-18 108.1 10.8 83 218-305 23-105 (124)
213 1wif_A RSGI RUH-020, riken cDN 99.5 1.5E-14 5E-19 110.1 8.4 82 4-91 27-110 (126)
214 3i4w_A Disks large homolog 4; 99.5 5.2E-14 1.8E-18 103.9 11.2 80 219-305 10-89 (104)
215 2d8i_A T-cell lymphoma invasio 99.5 2.4E-14 8.3E-19 107.2 9.5 88 3-94 14-103 (114)
216 2r4h_A Membrane-associated gua 99.5 4.4E-14 1.5E-18 105.8 10.9 81 219-305 23-103 (112)
217 2uzc_A Human pdlim5, PDZ and L 99.5 3.3E-14 1.1E-18 101.7 9.7 78 220-305 3-80 (88)
218 3r68_A Na(+)/H(+) exchange reg 99.5 2.5E-14 8.7E-19 103.8 9.0 76 220-302 5-80 (95)
219 2edv_A FERM and PDZ domain-con 99.5 6E-15 2.1E-19 107.4 5.5 81 4-92 8-89 (96)
220 1uf1_A KIAA1526 protein; PDZ d 99.5 2.5E-13 8.6E-18 104.2 14.8 88 4-95 20-107 (128)
221 1uew_A Membrane associated gua 99.5 6.9E-14 2.4E-18 105.1 11.3 84 219-305 9-97 (114)
222 1v62_A KIAA1719 protein; struc 99.5 7.5E-14 2.6E-18 105.3 11.4 83 219-305 14-96 (117)
223 2pa1_A PDZ and LIM domain prot 99.5 5.3E-14 1.8E-18 100.4 10.0 76 224-305 4-79 (87)
224 2vsp_A PDZ domain-containing p 99.5 1.5E-14 5.1E-19 104.2 7.0 78 220-305 3-80 (91)
225 2cs5_A Tyrosine-protein phosph 99.5 2.3E-14 7.9E-19 108.5 8.4 78 219-300 14-92 (119)
226 2csj_A TJP2 protein; PDZ domai 99.5 4.2E-14 1.4E-18 106.8 9.8 83 219-305 13-98 (117)
227 1z87_A Alpha-1-syntrophin; pro 99.5 2E-14 6.8E-19 122.9 8.9 87 214-305 71-157 (263)
228 2dlu_A INAD-like protein; PDZ 99.5 1E-13 3.5E-18 103.6 11.7 79 219-305 14-92 (111)
229 2jxo_A Ezrin-radixin-moesin-bi 99.5 1E-13 3.5E-18 101.2 11.5 79 220-305 9-87 (98)
230 3cyy_A Tight junction protein 99.5 8.4E-14 2.9E-18 100.4 10.9 83 3-93 2-84 (92)
231 3soe_A Membrane-associated gua 99.5 6.1E-14 2.1E-18 104.1 10.1 76 219-305 11-87 (113)
232 2q3g_A PDZ and LIM domain prot 99.5 3.7E-14 1.3E-18 101.6 8.7 77 220-304 3-79 (89)
233 2v90_A PDZ domain-containing p 99.5 7.5E-14 2.6E-18 101.5 10.2 81 220-305 3-83 (96)
234 1whd_A RGS3, regulator of G-pr 99.5 2.1E-14 7.2E-19 105.3 7.1 81 4-92 15-95 (100)
235 3tsv_A Tight junction protein 99.5 1.5E-13 5E-18 104.8 11.9 82 5-93 30-113 (124)
236 1x5q_A LAP4 protein; PDZ domai 99.5 3.1E-13 1.1E-17 100.8 13.4 85 217-305 12-99 (110)
237 1v6b_A Harmonin isoform A1; st 99.5 5E-14 1.7E-18 106.4 9.1 80 221-305 19-101 (118)
238 1va8_A Maguk P55 subfamily mem 99.5 2.5E-13 8.6E-18 101.8 12.9 79 219-305 24-102 (113)
239 2kom_A Partitioning defective 99.5 2.1E-13 7.3E-18 103.4 12.5 85 219-305 29-114 (121)
240 2djt_A Unnamed protein product 99.5 7.9E-14 2.7E-18 102.9 9.9 83 219-305 10-92 (104)
241 1q3o_A Shank1; PDZ, GKAP, pept 99.5 1.6E-13 5.5E-18 102.2 11.6 83 220-305 7-98 (109)
242 1ujv_A Membrane associated gua 99.5 2.4E-13 8.2E-18 98.8 12.1 83 2-93 8-92 (96)
243 2rcz_A Tight junction protein 99.5 1.4E-13 4.7E-18 96.7 10.6 78 6-91 3-80 (81)
244 1b8q_A Protein (neuronal nitri 99.5 4.2E-14 1.4E-18 108.4 8.4 90 2-94 6-96 (127)
245 2f5y_A Regulator of G-protein 99.5 1.4E-13 4.8E-18 99.0 10.6 74 220-304 3-76 (91)
246 1rgw_A ZAsp protein; PDZ, cyph 99.5 6.9E-14 2.4E-18 99.3 8.7 77 221-305 2-78 (85)
247 2yuy_A RHO GTPase activating p 99.5 6.9E-15 2.4E-19 112.6 3.7 88 4-93 8-121 (126)
248 2qbw_A PDZ-fibronectin fusion 99.5 1.3E-13 4.4E-18 113.6 11.4 74 15-90 1-80 (195)
249 1v5l_A PDZ and LIM domain 3; a 99.5 9.2E-15 3.2E-19 107.8 4.0 78 14-94 13-90 (103)
250 2kjd_A Sodium/hydrogen exchang 99.5 1.6E-13 5.5E-18 105.3 10.9 86 2-92 7-93 (128)
251 2w4f_A Protein LAP4; structura 99.5 2.6E-13 8.9E-18 98.8 11.5 82 220-305 3-87 (97)
252 2la8_A Inactivation-NO-after-p 99.5 8E-14 2.7E-18 103.2 8.8 78 220-305 2-79 (106)
253 1nf3_C PAR-6B; semi-CRIB motif 99.5 5.6E-14 1.9E-18 107.8 8.3 86 219-305 28-119 (128)
254 1v5q_A GRIP1 homolog, glutamat 99.5 1.8E-13 6.2E-18 104.0 11.0 87 218-305 13-101 (122)
255 2pkt_A PDZ and LIM domain prot 99.5 1.2E-13 4.2E-18 99.3 9.5 77 221-305 4-80 (91)
256 2vsv_A Rhophilin-2; scaffold p 99.5 1.2E-13 4.1E-18 102.5 9.1 76 220-305 23-98 (109)
257 2e7k_A Maguk P55 subfamily mem 99.5 9.2E-14 3.1E-18 100.0 8.2 76 221-305 7-82 (91)
258 3r0h_A INAD, inactivation-NO-a 99.5 2.3E-13 7.8E-18 113.1 11.7 85 5-94 114-198 (206)
259 2d90_A PDZ domain containing p 99.5 1.7E-13 5.9E-18 100.8 9.6 79 219-305 5-83 (102)
260 2gzv_A PRKCA-binding protein; 99.5 3.4E-13 1.2E-17 101.1 11.4 78 219-300 23-100 (114)
261 3gsl_A Disks large homolog 4; 99.5 2.8E-13 9.6E-18 111.5 12.0 88 5-93 101-191 (196)
262 2eeg_A PDZ and LIM domain prot 99.5 1.6E-13 5.6E-18 99.3 9.1 79 219-305 7-85 (94)
263 2h2b_A Tight junction protein 99.5 4.9E-13 1.7E-17 99.2 11.9 84 218-305 5-91 (107)
264 2fcf_A Multiple PDZ domain pro 99.5 3.7E-13 1.3E-17 99.1 11.1 84 220-305 4-93 (103)
265 3ngh_A PDZ domain-containing p 99.5 2.1E-13 7.3E-18 101.0 9.7 78 221-305 2-79 (106)
266 2dm8_A INAD-like protein; PDZ 99.5 2E-13 7E-18 102.8 9.6 82 219-305 16-97 (116)
267 3sfj_A TAX1-binding protein 3; 99.5 2.7E-13 9.4E-18 100.0 10.1 82 223-305 7-99 (104)
268 1mfg_A ERB-B2 interacting prot 99.5 4.8E-13 1.7E-17 97.0 11.2 79 221-305 4-87 (95)
269 2qkv_A Inactivation-NO-after-p 99.5 2.5E-13 8.6E-18 98.7 9.7 79 219-305 7-85 (96)
270 2iwn_A Multiple PDZ domain pro 99.5 5.1E-13 1.7E-17 97.2 11.1 84 219-305 3-87 (97)
271 2iwq_A Multiple PDZ domain pro 99.5 4.6E-13 1.6E-17 101.8 11.0 84 220-305 24-113 (123)
272 3qe1_A Sorting nexin-27, G pro 99.5 6.3E-13 2.1E-17 98.6 11.5 83 219-305 5-96 (107)
273 2eaq_A LIM domain only protein 99.5 4E-13 1.4E-17 96.4 10.0 81 6-92 5-89 (90)
274 2dls_A PDZ-rhogef, RHO guanine 99.5 5E-13 1.7E-17 96.5 10.5 75 219-305 7-81 (93)
275 2kv8_A RGS12, regulator of G-p 99.5 7.9E-14 2.7E-18 98.5 6.0 74 221-305 3-76 (83)
276 1tp5_A Presynaptic density pro 99.5 4.1E-13 1.4E-17 101.6 10.4 79 219-304 13-91 (119)
277 3bpu_A Membrane-associated gua 99.5 3.9E-13 1.3E-17 96.0 9.7 78 219-305 2-80 (88)
278 1uez_A KIAA1526 protein; PDZ d 99.5 3.3E-13 1.1E-17 99.0 9.4 77 219-299 7-83 (101)
279 2z17_A Pleckstrin homology SEC 99.4 5E-13 1.7E-17 98.6 10.1 82 221-305 16-101 (104)
280 1vae_A Rhophilin 2, rhophilin, 99.4 6.9E-14 2.4E-18 104.3 5.4 82 5-94 16-98 (111)
281 2eeh_A PDZ domain-containing p 99.4 7.7E-13 2.6E-17 96.9 10.9 80 219-305 9-88 (100)
282 2eei_A PDZ domain-containing p 99.4 2.2E-13 7.5E-18 100.9 8.0 74 219-299 7-80 (106)
283 1wf7_A Enigma homologue protei 99.4 1.9E-13 6.6E-18 100.7 7.4 79 219-305 4-82 (103)
284 1n7t_A 99-MER peptide of densi 99.4 4.3E-13 1.5E-17 98.8 9.1 81 219-305 10-95 (103)
285 1qau_A Neuronal nitric oxide s 99.4 1.2E-12 4E-17 97.9 11.6 80 221-305 2-81 (112)
286 3shw_A Tight junction protein 99.4 4.5E-13 1.5E-17 123.3 11.1 83 5-94 2-86 (468)
287 1um7_A Synapse-associated prot 99.4 3.3E-13 1.1E-17 101.1 8.4 80 218-304 13-92 (113)
288 1wfv_A Membrane associated gua 99.4 1.1E-13 3.8E-18 102.0 5.3 80 219-304 10-89 (103)
289 3kzd_A TIAM-1, T-lymphoma inva 99.4 6.8E-13 2.3E-17 95.2 9.1 76 219-297 5-81 (94)
290 3qik_A Phosphatidylinositol 3, 99.4 6.7E-13 2.3E-17 95.7 9.0 78 6-90 19-99 (101)
291 1wh1_A KIAA1095 protein; PDZ d 99.4 7E-13 2.4E-17 101.0 9.7 90 4-95 19-110 (124)
292 1y7n_A Amyloid beta A4 precurs 99.4 1.5E-12 5.1E-17 93.3 10.7 74 220-305 11-84 (90)
293 1ujv_A Membrane associated gua 99.4 1.5E-12 5E-17 94.6 10.8 76 219-305 9-85 (96)
294 2vz5_A TAX1-binding protein 3; 99.4 9.1E-13 3.1E-17 102.4 10.2 86 219-305 22-118 (139)
295 2kjd_A Sodium/hydrogen exchang 99.4 1.3E-12 4.6E-17 100.0 11.0 80 219-305 8-87 (128)
296 3k1r_A Harmonin; protein-prote 99.4 5.2E-13 1.8E-17 109.7 9.2 80 219-305 83-162 (192)
297 2yub_A LIMK-2, LIM domain kina 99.4 9.7E-13 3.3E-17 99.2 9.9 90 4-94 15-107 (118)
298 1wif_A RSGI RUH-020, riken cDN 99.4 3.5E-13 1.2E-17 102.4 7.5 79 219-305 26-105 (126)
299 1vb7_A PDZ and LIM domain 2; P 99.4 3E-13 1E-17 97.9 6.5 76 224-305 8-83 (94)
300 2lob_A Golgi-associated PDZ an 99.1 2.1E-14 7.3E-19 107.3 0.0 81 220-305 27-107 (112)
301 3tsz_A Tight junction protein 99.4 1.3E-12 4.4E-17 118.6 11.5 85 3-94 8-94 (391)
302 4fln_A Protease DO-like 2, chl 99.4 5.9E-12 2E-16 117.8 16.0 53 250-305 415-467 (539)
303 2edz_A PDZ domain-containing p 99.4 1.2E-12 4.2E-17 98.2 9.2 79 220-305 13-91 (114)
304 2krg_A Na(+)/H(+) exchange reg 99.4 2.6E-13 9E-18 113.0 6.0 85 3-92 8-93 (216)
305 3tsv_A Tight junction protein 99.4 2.4E-12 8.1E-17 98.0 10.7 74 223-305 32-106 (124)
306 3khf_A Microtubule-associated 99.4 1.3E-12 4.4E-17 95.5 8.4 79 223-305 5-87 (99)
307 1p1d_A PDZ45, glutamate recept 99.4 2E-12 6.9E-17 106.5 10.1 86 219-305 5-92 (196)
308 2edv_A FERM and PDZ domain-con 99.4 5.8E-13 2E-17 96.7 5.8 77 219-305 7-83 (96)
309 1whd_A RGS3, regulator of G-pr 99.4 1.4E-12 4.8E-17 95.5 7.7 76 219-305 14-89 (100)
310 1x5n_A Harmonin; PDZ domain, u 99.4 5E-12 1.7E-16 94.8 10.7 75 219-298 14-88 (114)
311 2edp_A Fragment, shroom family 99.4 1.3E-12 4.3E-17 95.7 6.8 78 221-304 10-87 (100)
312 1uit_A Human discs large 5 pro 99.3 5.1E-12 1.7E-16 95.2 10.1 76 220-304 19-94 (117)
313 1vae_A Rhophilin 2, rhophilin, 99.3 5.4E-13 1.8E-17 99.5 4.6 74 222-305 17-90 (111)
314 2yuy_A RHO GTPase activating p 99.3 6.6E-13 2.2E-17 101.5 5.2 81 221-305 9-114 (126)
315 1v5l_A PDZ and LIM domain 3; a 99.3 6.1E-13 2.1E-17 98.0 4.6 76 222-305 7-82 (103)
316 2d8i_A T-cell lymphoma invasio 99.3 2.8E-12 9.5E-17 96.0 7.8 76 219-297 14-90 (114)
317 3shw_A Tight junction protein 99.3 3.8E-12 1.3E-16 117.1 10.3 76 221-305 2-78 (468)
318 1b8q_A Protein (neuronal nitri 99.3 2.2E-12 7.7E-17 98.7 7.4 82 219-305 7-88 (127)
319 2qt5_A Glutamate receptor-inte 99.3 8.3E-12 2.8E-16 103.1 11.4 77 219-299 6-82 (200)
320 1wh1_A KIAA1095 protein; PDZ d 99.3 7E-12 2.4E-16 95.4 10.0 84 219-305 18-101 (124)
321 3qik_A Phosphatidylinositol 3, 99.3 9.4E-12 3.2E-16 89.7 9.4 76 221-305 18-95 (101)
322 3cyy_A Tight junction protein 99.3 1.9E-11 6.6E-16 87.8 10.5 73 222-304 4-76 (92)
323 2qbw_A PDZ-fibronectin fusion 99.3 9.4E-12 3.2E-16 102.4 10.0 70 233-305 2-76 (195)
324 3tsz_A Tight junction protein 99.3 9.5E-12 3.2E-16 112.9 10.3 77 220-305 9-86 (391)
325 2eaq_A LIM domain only protein 99.3 2.3E-11 7.7E-16 87.1 9.1 76 222-304 5-82 (90)
326 1uf1_A KIAA1526 protein; PDZ d 99.3 3.5E-11 1.2E-15 92.1 10.5 75 219-298 19-93 (128)
327 2rcz_A Tight junction protein 99.3 4.6E-11 1.6E-15 83.6 10.4 64 232-305 12-75 (81)
328 2krg_A Na(+)/H(+) exchange reg 99.2 1.3E-11 4.3E-16 102.8 8.0 77 219-303 8-84 (216)
329 1w9e_A Syntenin 1; cell adhesi 99.2 3.5E-11 1.2E-15 96.3 10.3 78 220-305 4-81 (166)
330 3suz_A Amyloid beta A4 precurs 99.1 2.8E-11 9.6E-16 109.9 4.7 84 220-305 204-288 (388)
331 2yub_A LIMK-2, LIM domain kina 99.1 2.1E-10 7.2E-15 86.3 7.7 71 233-305 27-99 (118)
332 2kjp_A Uncharacterized protein 99.0 3E-10 1E-14 81.3 4.3 58 33-94 2-61 (91)
333 3i18_A LMO2051 protein; alpha- 98.9 4.2E-09 1.4E-13 76.7 9.3 58 32-93 7-66 (100)
334 2kl1_A YLBL protein; structure 98.9 2E-09 6.9E-14 77.5 6.6 58 32-93 5-64 (94)
335 2i6v_A General secretion pathw 98.9 3.8E-09 1.3E-13 74.9 7.5 71 17-92 6-78 (87)
336 2pzd_A Serine protease HTRA2; 98.9 4.7E-09 1.6E-13 78.3 8.1 58 32-93 35-92 (113)
337 2l97_A HTRA, putative serine p 98.8 1.2E-08 3.9E-13 78.6 9.0 74 16-93 29-116 (134)
338 3id1_A Regulator of sigma E pr 98.8 9.6E-09 3.3E-13 74.1 7.6 57 34-93 4-62 (95)
339 2p3w_A Probable serine proteas 98.8 1.1E-08 3.9E-13 76.0 7.6 58 32-93 35-92 (112)
340 1fc6_A Photosystem II D1 prote 98.8 2.8E-08 9.7E-13 90.2 10.7 74 16-93 85-160 (388)
341 2zpm_A Regulator of sigma E pr 98.8 1.2E-08 4E-13 72.9 6.3 57 34-93 6-63 (91)
342 2i4s_A General secretion pathw 98.7 5.7E-08 1.9E-12 71.3 8.5 58 32-92 37-96 (105)
343 3k50_A Putative S41 protease; 98.6 3.3E-08 1.1E-12 89.8 6.8 75 15-93 73-147 (403)
344 1y8t_A Hypothetical protein RV 98.6 1.3E-07 4.4E-12 83.8 10.5 71 17-93 230-303 (324)
345 3rle_A Golgi reassembly-stacki 98.6 7E-08 2.4E-12 80.0 8.2 73 16-92 95-170 (209)
346 2hga_A Conserved protein MTH13 98.6 1.5E-07 5.1E-12 71.3 8.6 57 32-93 25-83 (125)
347 1te0_A Protease DEGS; two doma 98.6 6.7E-08 2.3E-12 85.3 7.3 76 16-94 221-305 (318)
348 2kjp_A Uncharacterized protein 98.6 1.3E-08 4.4E-13 72.7 2.1 51 251-305 2-53 (91)
349 3stj_A Protease DEGQ; serine p 98.6 1.3E-07 4.5E-12 84.3 8.3 60 32-94 263-324 (345)
350 3i18_A LMO2051 protein; alpha- 98.6 1.5E-07 5.2E-12 68.4 7.0 52 250-305 7-59 (100)
351 1fc6_A Photosystem II D1 prote 98.6 1.7E-07 5.9E-12 85.0 8.8 68 233-305 85-153 (388)
352 2pzd_A Serine protease HTRA2; 98.5 1.9E-07 6.4E-12 69.5 7.3 45 250-297 35-79 (113)
353 2zpm_A Regulator of sigma E pr 98.5 8.7E-08 3E-12 68.3 5.0 52 251-305 5-56 (91)
354 2kl1_A YLBL protein; structure 98.5 7.6E-08 2.6E-12 69.1 4.7 52 250-305 5-57 (94)
355 3id1_A Regulator of sigma E pr 98.5 1.5E-07 5.3E-12 67.6 6.3 51 252-305 4-55 (95)
356 4a8c_A Periplasmic PH-dependen 98.5 2.1E-07 7.2E-12 85.7 8.6 60 32-94 363-422 (436)
357 2i6v_A General secretion pathw 98.5 9.2E-08 3.1E-12 67.6 4.8 53 250-305 19-72 (87)
358 1lcy_A HTRA2 serine protease; 98.5 3.3E-07 1.1E-11 81.1 8.4 58 32-93 256-313 (325)
359 2l97_A HTRA, putative serine p 98.5 2.3E-07 7.8E-12 71.2 6.3 52 250-305 57-109 (134)
360 3pv2_A DEGQ; trypsin fold, PDZ 98.5 2.4E-07 8.3E-12 85.6 7.5 59 32-93 386-444 (451)
361 3qo6_A Protease DO-like 1, chl 98.5 2.5E-07 8.6E-12 82.7 7.0 60 32-94 251-323 (348)
362 4fgm_A Aminopeptidase N family 98.4 4E-07 1.4E-11 86.8 8.5 71 15-94 484-556 (597)
363 2p3w_A Probable serine proteas 98.4 7.1E-07 2.4E-11 66.1 6.8 44 250-296 35-78 (112)
364 2i4s_A General secretion pathw 98.3 9.7E-07 3.3E-11 64.6 5.7 52 251-305 38-90 (105)
365 3k50_A Putative S41 protease; 98.2 6.9E-07 2.3E-11 81.1 4.8 67 233-305 74-140 (403)
366 2hga_A Conserved protein MTH13 98.2 2.7E-06 9.2E-11 64.3 6.8 52 250-305 25-77 (125)
367 3num_A Serine protease HTRA1; 98.2 1.8E-07 6E-12 83.2 0.0 59 32-94 254-312 (332)
368 1y8t_A Hypothetical protein RV 98.2 4.4E-06 1.5E-10 73.8 8.7 66 233-305 229-295 (324)
369 1ky9_A Protease DO, DEGP, HTRA 98.2 2.2E-07 7.5E-12 85.8 0.0 59 32-93 383-441 (448)
370 3stj_A Protease DEGQ; serine p 98.1 3.4E-06 1.2E-10 75.1 6.7 53 250-305 263-316 (345)
371 1te0_A Protease DEGS; two doma 98.1 4.7E-06 1.6E-10 73.5 6.9 53 250-305 244-297 (318)
372 4fgm_A Aminopeptidase N family 98.1 4.5E-06 1.5E-10 79.6 6.3 63 233-305 485-548 (597)
373 3qo6_A Protease DO-like 1, chl 98.0 1E-05 3.5E-10 72.2 6.8 53 250-305 251-315 (348)
374 1lcy_A HTRA2 serine protease; 98.0 1.4E-05 4.9E-10 70.5 7.5 45 250-297 256-300 (325)
375 1k32_A Tricorn protease; prote 97.8 3.9E-05 1.3E-09 78.1 8.7 70 15-92 736-815 (1045)
376 3num_A Serine protease HTRA1; 97.6 8.3E-06 2.8E-10 72.3 0.0 45 250-297 254-298 (332)
377 1k32_A Tricorn protease; prote 97.5 9.8E-05 3.4E-09 75.1 6.9 64 233-305 737-809 (1045)
378 4fln_A Protease DO-like 2, chl 97.3 0.00061 2.1E-08 63.8 8.0 55 32-89 415-470 (539)
379 3dor_A Protein CT_858, CPAF; m 72.0 4.8 0.00016 37.7 5.3 42 17-67 85-126 (583)
380 3dor_A Protein CT_858, CPAF; m 68.7 7.2 0.00025 36.5 5.7 29 251-284 97-125 (583)
381 1a62_A RHO; transcription term 41.6 28 0.00096 25.6 3.9 38 16-58 60-98 (130)
382 3pjy_A Hypothetical signal pep 37.0 22 0.00074 26.5 2.7 24 251-276 102-125 (136)
383 3bbo_O Ribosomal protein L16; 36.1 26 0.0009 26.0 3.0 29 264-297 92-120 (135)
384 3m7a_A Uncharacterized protein 34.4 25 0.00086 26.3 2.7 23 252-276 117-139 (140)
385 2j3t_D Trafficking protein par 32.9 27 0.00093 28.3 2.8 45 45-90 52-100 (219)
386 1uhe_A Aspartate 1-decarboxyla 31.8 19 0.00065 25.0 1.5 21 258-280 44-64 (97)
387 1vc3_B L-aspartate-alpha-decar 31.2 19 0.00065 24.9 1.4 20 259-280 47-66 (96)
388 3plx_B Aspartate 1-decarboxyla 30.9 20 0.00068 25.1 1.5 19 259-279 46-64 (102)
389 1ex2_A Protein MAF; structural 29.8 50 0.0017 26.0 3.9 36 269-304 66-102 (189)
390 2ftc_I Mitochondrial ribosomal 29.5 33 0.0011 24.8 2.5 28 268-299 83-110 (118)
391 1pqh_A Aspartate 1-decarboxyla 29.4 67 0.0023 23.8 4.1 24 41-66 88-111 (143)
392 2amh_A Septum formation protei 28.7 52 0.0018 26.3 3.8 36 269-304 85-121 (207)
393 2p5x_A ASMTL, N-acetylserotoni 27.8 55 0.0019 26.7 3.9 35 269-303 75-110 (230)
394 3oug_A Aspartate 1-decarboxyla 26.7 55 0.0019 23.3 3.1 22 42-65 75-96 (114)
395 2j3t_D Trafficking protein par 26.4 36 0.0012 27.5 2.5 23 263-286 52-74 (219)
396 3bbo_O Ribosomal protein L16; 25.6 63 0.0022 23.9 3.5 34 42-80 88-121 (135)
397 2wns_A Orotate phosphoribosylt 23.9 48 0.0016 26.3 2.8 37 267-303 106-142 (205)
398 3m3h_A OPRT, oprtase, orotate 23.7 47 0.0016 27.1 2.7 37 267-303 132-168 (234)
399 3dez_A OPRT, oprtase, orotate 21.9 53 0.0018 26.9 2.7 37 267-303 144-180 (243)
400 3r8s_M 50S ribosomal protein L 20.9 31 0.001 25.7 0.9 27 268-299 95-121 (136)
401 3m3h_A OPRT, oprtase, orotate 20.7 1E+02 0.0034 25.1 4.1 37 48-84 131-167 (234)
402 2dy0_A APRT, adenine phosphori 20.0 59 0.002 25.3 2.6 35 269-303 123-157 (190)
No 1
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.97 E-value=3.8e-30 Score=213.37 Aligned_cols=177 Identities=32% Similarity=0.540 Sum_probs=148.4
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCc---CCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAH---FSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~---~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
+-+++.|+|.|. +++|||+|.++..... ..|+||..|.|+|||+++|+|+.||+|++|||+++.++++.++..+++
T Consensus 3 ~~~~~~v~l~~~-~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 81 (196)
T 3gsl_A 3 SMEYEEITLERG-NSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK 81 (196)
T ss_dssp CEEEEEEEEECB-TTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CcEEEEEEEEEC-CCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457899999995 5789999999865421 368999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCCCCcccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCccc
Q psy8436 79 NKDSHVEIVICRNPDDAKSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEK 158 (306)
Q Consensus 79 ~~~~~v~L~v~r~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (306)
.++..+.|+|.|.....
T Consensus 82 ~~g~~v~l~v~r~~~~~--------------------------------------------------------------- 98 (196)
T 3gsl_A 82 EAGSIVRLYVMRRKPPA--------------------------------------------------------------- 98 (196)
T ss_dssp TSCSEEEEEEEEECCCC---------------------------------------------------------------
T ss_pred hCCCcEEEEEEecCCCc---------------------------------------------------------------
Confidence 99999999998853110
Q ss_pred ccccccccccccccccccceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeCCCCCcccEE
Q psy8436 159 SQTSNCSKIRNKVTGMRKFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKGPGQKSLGFS 238 (306)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~~lG~~ 238 (306)
...+++.+.+.. .+|||+
T Consensus 99 ------------------------------------------------------------~~~~~v~l~~~~--~~lG~~ 116 (196)
T 3gsl_A 99 ------------------------------------------------------------EKVMEIKLIKGP--KGLGFS 116 (196)
T ss_dssp ------------------------------------------------------------EEEEEEEEEEBT--TBSCEE
T ss_pred ------------------------------------------------------------cccEEEEEecCC--CCceEE
Confidence 123457777775 589999
Q ss_pred EEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 239 IVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 239 l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
+.++.+... ...|+||..|.++|+|+++|+|++||+|++|||+++.+++|++++.+|++. ++.+.|
T Consensus 117 ~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l 184 (196)
T 3gsl_A 117 IAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YDVVYL 184 (196)
T ss_dssp EEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC-CEEEEE
T ss_pred EEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC-CCeEEE
Confidence 988765432 135899999999999999999999999999999999999999999999875 444443
No 2
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.97 E-value=1.7e-29 Score=211.25 Aligned_cols=170 Identities=21% Similarity=0.348 Sum_probs=142.8
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCC--CCHHHHHHHHhcCC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKG--LTIQEAREALNNKD 81 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~--~~~~~a~~~l~~~~ 81 (306)
+...|.|.| .+.+|||+|.++.+.....|++|..|.++|||+++|+|+.||+|++|||+++.+ ++|.+++.+++.++
T Consensus 18 ~~~~v~~~~-~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~ 96 (206)
T 3r0h_A 18 KKILIELKV-EKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTY 96 (206)
T ss_dssp SCEEEEEEC-TTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCC
T ss_pred CEEEEEEEe-CCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcC
Confidence 456788988 568999999998654322589999999999999999999999999999999999 99999999999998
Q ss_pred Ce-EEEEEEeCCCCCcccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCccccc
Q psy8436 82 SH-VEIVICRNPDDAKSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEKSQ 160 (306)
Q Consensus 82 ~~-v~L~v~r~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (306)
.. |.|+|.|.....
T Consensus 97 ~~~v~l~v~R~~~~~----------------------------------------------------------------- 111 (206)
T 3r0h_A 97 EKAVTLTVFRADPPE----------------------------------------------------------------- 111 (206)
T ss_dssp SSEEEEEEECCSSCC-----------------------------------------------------------------
T ss_pred CCceEEEEEecccCC-----------------------------------------------------------------
Confidence 87 999999863210
Q ss_pred ccccccccccccccccceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeCCCCCcccEEEE
Q psy8436 161 TSNCSKIRNKVTGMRKFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKGPGQKSLGFSIV 240 (306)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~~lG~~l~ 240 (306)
...+++.+.+... .+|||++.
T Consensus 112 ----------------------------------------------------------~~~~~v~l~~~~~-~~lG~~~~ 132 (206)
T 3r0h_A 112 ----------------------------------------------------------LEKFNVDLMKKAG-KELGLSLS 132 (206)
T ss_dssp ----------------------------------------------------------EEEEEEEEECCTT-CCCCEEEE
T ss_pred ----------------------------------------------------------CcEEEEEEecCCC-CccCeEEE
Confidence 1234566666543 57999998
Q ss_pred cCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 241 GGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 241 gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
++. .|+||..|.++|+|+++|+|++||+|++|||+++.+++|++++.+|++.. +.+.|
T Consensus 133 ~~~------~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~-~~v~L 190 (206)
T 3r0h_A 133 PNE------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN-GKVSM 190 (206)
T ss_dssp ECS------SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEE
T ss_pred cCC------ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEE
Confidence 654 58999999999999999889999999999999999999999999998754 44443
No 3
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.96 E-value=9.8e-28 Score=199.61 Aligned_cols=182 Identities=23% Similarity=0.365 Sum_probs=145.6
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..+.|.|.|..+++|||+|.++.... .+++|..|.++|||+++|.|+.||+|++|||+++.+++|.++..+++.+++.
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~--~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~ 84 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKD--GKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGER 84 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSS--SCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSE
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCC--CCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 46788999988999999999886543 5799999999999999933999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCcccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCcccccccc
Q psy8436 84 VEIVICRNPDDAKSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEKSQTSN 163 (306)
Q Consensus 84 v~L~v~r~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (306)
|.|+|.|..+... . ..
T Consensus 85 v~l~v~R~~~~~~---~-----------~g-------------------------------------------------- 100 (200)
T 2qt5_A 85 VVLEVEYELPPVS---I-----------QG-------------------------------------------------- 100 (200)
T ss_dssp EEEEEEEECCCCC---C-----------CC--------------------------------------------------
T ss_pred EEEEEeccCCCcc---c-----------CC--------------------------------------------------
Confidence 9999988532100 0 00
Q ss_pred cccccccccccccceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeCCCCCcccEEEEcCC
Q psy8436 164 CSKIRNKVTGMRKFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKGPGQKSLGFSIVGGR 243 (306)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~~lG~~l~gg~ 243 (306)
.........+.+.+. ...|||.+.++.
T Consensus 101 ---------------------------------------------------~~~~~~~~~v~l~~~--~~~lG~~l~~g~ 127 (200)
T 2qt5_A 101 ---------------------------------------------------SSVMFRTVEVTLHKE--GNTFGFVIRGGA 127 (200)
T ss_dssp ---------------------------------------------------SSEEEEEEEEEEECB--TTBCSEEEEEEC
T ss_pred ---------------------------------------------------CccceeEEEEEEecC--CCCeEEEEECCC
Confidence 000012345666554 367999998765
Q ss_pred CCCC-CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 244 DSPK-GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 244 ~~~~-~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
+... ...|++|..|.++|+|+++|+|++||+|++|||+++.++++++++.+|++ +++.+.|
T Consensus 128 ~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l 189 (200)
T 2qt5_A 128 HDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEATL 189 (200)
T ss_dssp CSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEE
T ss_pred CCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEE
Confidence 4211 13589999999999999999999999999999999999999999999998 6666654
No 4
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.95 E-value=7.2e-27 Score=193.74 Aligned_cols=181 Identities=22% Similarity=0.311 Sum_probs=145.5
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC--cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA--HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~--~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
-+.++|.|.|.+..+|||++.++.... ...+++|..|.++|||+++|+|+.||+|++|||+.+.+++|.++..+|+..
T Consensus 5 ~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 84 (196)
T 1p1d_A 5 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDS 84 (196)
T ss_dssp CEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 467889999988899999999985432 235799999999999999999999999999999999999999999999988
Q ss_pred --CCeEEEEEEeCCCCCcccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCccc
Q psy8436 81 --DSHVEIVICRNPDDAKSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEK 158 (306)
Q Consensus 81 --~~~v~L~v~r~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (306)
+..|.|+|.|....... |
T Consensus 85 ~~g~~v~l~v~R~~~~~~~----------~-------------------------------------------------- 104 (196)
T 1p1d_A 85 SITSKVTLEIEFDVAESVI----------P-------------------------------------------------- 104 (196)
T ss_dssp CSSSEEEEEEEECSCSCCB----------C--------------------------------------------------
T ss_pred CCCCeEEEEEEecCCCCCC----------C--------------------------------------------------
Confidence 67899999986532100 0
Q ss_pred ccccccccccccccccccceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeCCCCCcccEE
Q psy8436 159 SQTSNCSKIRNKVTGMRKFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKGPGQKSLGFS 238 (306)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~~lG~~ 238 (306)
. ...+.+.+.+.. ...|||.
T Consensus 105 --------------------------------------------------------~---~~~~~v~l~~~~-~~~lG~~ 124 (196)
T 1p1d_A 105 --------------------------------------------------------S---SGTFHVKLPKKH-SVELGIT 124 (196)
T ss_dssp --------------------------------------------------------C---SSCEEEEECCCS-SCCCCCE
T ss_pred --------------------------------------------------------C---CCcEEEEecCCC-CCCcCEE
Confidence 0 001234444332 2579999
Q ss_pred EEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 239 IVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 239 l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
+....+.. ...|++|..|.++|+|+++|+|++||+|++|||+++.+++++++.++|++. ++.+.|
T Consensus 125 ~~~~~~~~-~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l 189 (196)
T 1p1d_A 125 ISSPSSRK-PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKL 189 (196)
T ss_dssp EECSCSSS-TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEE
T ss_pred EECCCCCC-CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEE
Confidence 98764332 125899999999999999988999999999999999999999999999987 666654
No 5
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.95 E-value=1.6e-26 Score=226.02 Aligned_cols=171 Identities=32% Similarity=0.562 Sum_probs=144.0
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN 79 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~ 79 (306)
-+.++|.|.|.. ++|||+|.||.+.. ...|++|..|.+||||+++|+|+.||+|++|||+++.+++|.+++.+|+.
T Consensus 58 ~~~~~v~l~k~~-~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 136 (721)
T 2xkx_A 58 MEYEEITLERGN-SGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKE 136 (721)
T ss_pred ceEEEEEEEeCC-CCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhhc
Confidence 356889999966 69999999986542 24689999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCCCCcccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCcccc
Q psy8436 80 KDSHVEIVICRNPDDAKSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEKS 159 (306)
Q Consensus 80 ~~~~v~L~v~r~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
++..|.|+|.|.....
T Consensus 137 ~g~~v~l~v~R~~~~~---------------------------------------------------------------- 152 (721)
T 2xkx_A 137 AGSIVRLYVMRRKPPA---------------------------------------------------------------- 152 (721)
T ss_pred cccccceEEEeccccc----------------------------------------------------------------
Confidence 9999999998853110
Q ss_pred cccccccccccccccccceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeCCCCCcccEEE
Q psy8436 160 QTSNCSKIRNKVTGMRKFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKGPGQKSLGFSI 239 (306)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~~lG~~l 239 (306)
...++|+|.+.. .+|||++
T Consensus 153 -----------------------------------------------------------~~~~~v~l~k~~--~~lG~~i 171 (721)
T 2xkx_A 153 -----------------------------------------------------------EKVMEIKLIKGP--KGLGFSI 171 (721)
T ss_pred -----------------------------------------------------------ccceeeeeeeec--CCCceee
Confidence 012356776653 5799999
Q ss_pred EcCCCCC--CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 240 VGGRDSP--KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 240 ~gg~~~~--~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.++.+.. .+..|++|..|.++|+|+++|+|++||+|++|||+++.+++|.+++.+|+...
T Consensus 172 ~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 233 (721)
T 2xkx_A 172 AGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 233 (721)
T ss_pred ccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC
Confidence 8875432 12368999999999999999999999999999999999999999999998754
No 6
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.92 E-value=2e-23 Score=204.06 Aligned_cols=227 Identities=25% Similarity=0.434 Sum_probs=147.5
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCc---CCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAH---FSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~---~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
..+|.|.+. ..+|||++.++....+ ..|++|..|.++|+|+++|+|++||+|++|||+++.+++|.+++.+++.++
T Consensus 155 ~~~v~l~k~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 233 (721)
T 2xkx_A 155 VMEIKLIKG-PKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 233 (721)
T ss_pred ceeeeeeee-cCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCC
Confidence 356778774 5689999998743221 258999999999999999999999999999999999999999999999998
Q ss_pred CeEEEEEEeCCCCCcccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCcccccc
Q psy8436 82 SHVEIVICRNPDDAKSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEKSQT 161 (306)
Q Consensus 82 ~~v~L~v~r~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
..|.|+|.|......... ...|........ . . ....+. .
T Consensus 234 ~~v~l~V~R~g~~~~~~~-----~~~p~~~~~~s~----~---------~-~~~~~~------------------~---- 272 (721)
T 2xkx_A 234 DVVYLKVAKPSNAYLSDS-----YAPPDITTSYSQ----H---------L-DNEISH------------------S---- 272 (721)
T ss_pred CeEEEEEEeCCcccccCC-----CCCCCcccCCCC----C---------c-ccccCC------------------c----
Confidence 999999999764321000 000000000000 0 0 000000 0
Q ss_pred cccccccccccccccceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeCCCCCcccEEEEc
Q psy8436 162 SNCSKIRNKVTGMRKFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKGPGQKSLGFSIVG 241 (306)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~~lG~~l~g 241 (306)
...+. ......+.. .....++.. ... . .........+.|.|.+.. .+|||++.+
T Consensus 273 ~~~~~-------------~~~~~~~~~-------~~~~~~p~~--~~~-~-~~~~~~~~~~~v~l~~~~--~~lG~~i~~ 326 (721)
T 2xkx_A 273 SYLGT-------------DYPTAMTPT-------SPRRYSPVA--KDL-L-GEEDIPREPRRIVIHRGS--TGLGFNIVG 326 (721)
T ss_pred ccccc-------------cccccCCCC-------CCcccCCcc--ccc-c-cccccccceEEEEEEECC--CCccEEEec
Confidence 00000 000000000 000000000 000 0 000112346778898874 679999988
Q ss_pred CCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCcee
Q psy8436 242 GRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSK 304 (306)
Q Consensus 242 g~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~ 304 (306)
+.+. .|+||..|.++|+|+++|+|++||+|++|||+++.+++|++++.+|++.. +.+.
T Consensus 327 ~~~~----~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~-~~v~ 384 (721)
T 2xkx_A 327 GEDG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG-QTVT 384 (721)
T ss_pred cCCC----CCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcC-CeEE
Confidence 7652 59999999999999999999999999999999999999999999999864 4443
No 7
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.92 E-value=2e-26 Score=209.76 Aligned_cols=161 Identities=21% Similarity=0.424 Sum_probs=78.2
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-- 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-- 80 (306)
...+.|.|.|..+++|||+|.+...+...+|++|..|.++|||+++|+|+.||+|++|||+++.+++|.+++.+|+..
T Consensus 203 ~~~~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~ 282 (388)
T 3suz_A 203 ENCKELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKN 282 (388)
T ss_dssp SCCEEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTT
T ss_pred ccceEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccC
Confidence 457899999988899999999865554456799999999999999999999999999999999999999999999986
Q ss_pred CCeEEEEEEeCCCCCcccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCccccc
Q psy8436 81 DSHVEIVICRNPDDAKSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEKSQ 160 (306)
Q Consensus 81 ~~~v~L~v~r~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (306)
+..|.|+|.|.....
T Consensus 283 ~~~v~l~v~r~~~~~----------------------------------------------------------------- 297 (388)
T 3suz_A 283 QTQVKLNIVSCPPVT----------------------------------------------------------------- 297 (388)
T ss_dssp CSCEEEEEEECCSCC-----------------------------------------------------------------
T ss_pred CCccccccccccccc-----------------------------------------------------------------
Confidence 345999998853211
Q ss_pred ccccccccccccccccceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeCCCCCcccEEEE
Q psy8436 161 TSNCSKIRNKVTGMRKFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKGPGQKSLGFSIV 240 (306)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~~lG~~l~ 240 (306)
++.+.......+|||.+.
T Consensus 298 --------------------------------------------------------------~v~l~~~~~~~~lG~~i~ 315 (388)
T 3suz_A 298 --------------------------------------------------------------TVLIKRPDLKYQLGFSVQ 315 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------eeeEeecCCCCccceEEe
Confidence 111111111246999875
Q ss_pred cCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCC
Q psy8436 241 GGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQ 301 (306)
Q Consensus 241 gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~ 301 (306)
+ .+|..|.++|+|+++| |++||+|++|||+++.+++|++++.+|++.+..
T Consensus 316 ~----------g~I~~V~~gs~A~~aG-L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~ 365 (388)
T 3suz_A 316 N----------GIICSLMRGGIAERGG-VRVGHRIIEINGQSVVATAHEKIVQALSNSVGE 365 (388)
T ss_dssp -------------------------------------------------------------
T ss_pred c----------CEEEEeecCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3 3799999999999999 999999999999999999999999999986543
No 8
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.91 E-value=1.3e-22 Score=163.61 Aligned_cols=151 Identities=19% Similarity=0.322 Sum_probs=126.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-CC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-DS 82 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-~~ 82 (306)
+.|+|.|.|....+|||++.... .|++|..|.++|||+++| |+.||+|++|||+++.+++++.+..+++.. +.
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~~~-----~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~ 77 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKSID-----NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAFGE 77 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEEET-----TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSS
T ss_pred CCEEEEEEeCCCCcEeEEEEeCC-----CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCC
Confidence 57899999988889999998753 479999999999999999 999999999999999999987888888775 45
Q ss_pred eEEEEEEeCCCCCcccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCccccccc
Q psy8436 83 HVEIVICRNPDDAKSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEKSQTS 162 (306)
Q Consensus 83 ~v~L~v~r~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
.+.|+|++...
T Consensus 78 ~v~l~vr~~~~--------------------------------------------------------------------- 88 (166)
T 1w9e_A 78 KITMTIRDRPF--------------------------------------------------------------------- 88 (166)
T ss_dssp EEEEEEECCTT---------------------------------------------------------------------
T ss_pred EEEEEEEcCCC---------------------------------------------------------------------
Confidence 89999944311
Q ss_pred ccccccccccccccceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeCCCCCcccEEEEcC
Q psy8436 163 NCSKIRNKVTGMRKFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKGPGQKSLGFSIVGG 242 (306)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~~lG~~l~gg 242 (306)
.+++.+.+.. ...|||.+.
T Consensus 89 ----------------------------------------------------------~~~v~l~~~~-~~~lG~~~~-- 107 (166)
T 1w9e_A 89 ----------------------------------------------------------ERTITMHKDS-TGHVGFIFK-- 107 (166)
T ss_dssp ----------------------------------------------------------CEEEEEECCT-TSCCSEEEE--
T ss_pred ----------------------------------------------------------cEEEEEecCC-CCcEeEEEe--
Confidence 1234554332 357999987
Q ss_pred CCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 243 RDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 243 ~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.| +|..|.++++|+++| |++||+|++|||.++.++++.++...++...
T Consensus 108 -------~g-~v~~v~~~s~a~~aG-l~~GD~I~~ing~~v~~~~~~~v~~~v~r~g 155 (166)
T 1w9e_A 108 -------NG-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSG 155 (166)
T ss_dssp -------TT-EEEEECTTSHHHHTT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred -------CC-EEEEEccCCHHHHcC-CCCCCEEEEECCEECCCCChHHHHHHHhhCC
Confidence 14 899999999999998 9999999999999999999999888877644
No 9
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.83 E-value=1.8e-19 Score=150.51 Aligned_cols=157 Identities=20% Similarity=0.173 Sum_probs=107.1
Q ss_pred ceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCC-CEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCCCC
Q psy8436 17 ELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVG-DELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPDDA 95 (306)
Q Consensus 17 ~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~G-D~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~~~ 95 (306)
++|++...+... ..|++|..|.++|||+++| |+.| |+|++|||+.+.++......-+....+..+.|+|.|.....
T Consensus 3 g~~~~~~~~~~~--~~G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~ 79 (209)
T 3rle_A 3 GSSQSVEIPGGG--TEGYHVLRVQENSPGHRAG-LEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLE 79 (209)
T ss_dssp -----CCCTTSS--SEEEEEEEECTTSHHHHTT-CCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCC
T ss_pred chhhhhhccCCC--CCEEEEEEECCCCHHHHCC-CCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCce
Confidence 444444433332 3689999999999999999 9999 99999999999988754443233344778999999864221
Q ss_pred cccCcCCCCCCCCCCCCCCchhhhhcccccccccCCCCCCCChhhhhcCccceeeecccCcccccccccccccccccccc
Q psy8436 96 KSATNCDNLQPNPKNLPKKNIIINQRQKNIVEKSLMPERQVSMPEIERNKTEVIATTQVSNEKSQTSNCSKIRNKVTGMR 175 (306)
Q Consensus 96 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (306)
.
T Consensus 80 ~------------------------------------------------------------------------------- 80 (209)
T 3rle_A 80 L------------------------------------------------------------------------------- 80 (209)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred E-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cceecccCCCCCCcCccccCCCCCCCCCCCCCCCCcCCCCCCccceEEEEEEeC---CCCCcccEEEEcCCCCCCCCCcE
Q psy8436 176 KFSCQFDGISPRRRQSVVDHNRSNVAATPNNSNATVKRPKSLSLSMFTVTFQKG---PGQKSLGFSIVGGRDSPKGNLGI 252 (306)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~k~---~~~~~lG~~l~gg~~~~~~~~gi 252 (306)
..+++... .....||+++...........|+
T Consensus 81 ----------------------------------------------~~v~l~p~~~~~~~~~lGi~~~~~~~~~~~~~Gv 114 (209)
T 3rle_A 81 ----------------------------------------------RETSVTPSNLWGGQGLLGVSIRFCSFDGANENVW 114 (209)
T ss_dssp ----------------------------------------------EEEEECCCSSSSSSSSSCEEEEEEECTTGGGSCE
T ss_pred ----------------------------------------------EEEEEcccccccccCccceEEeecChhHccccce
Confidence 00011000 00135888876322211112589
Q ss_pred EEEEEcCCChhhhcCCCCC-CCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 253 FVKTIFQSGQAAENEKLRE-GDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 253 ~V~~V~~~g~A~~~G~L~~-GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
+|..|.++|||+++| |++ ||+|++|||. +.++ +++..+|++.+++.+.|
T Consensus 115 ~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~~--~~l~~~l~~~~g~~v~l 164 (209)
T 3rle_A 115 HVLEVESNSPAALAG-LRPHSDYIIGADTV-MNES--EDLFSLIETHEAKPLKL 164 (209)
T ss_dssp EEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCSS--SCHHHHHHHTTTSCEEE
T ss_pred EEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCCH--HHHHHHHHhCCCCeEEE
Confidence 999999999999999 999 9999999997 6554 68888888887777654
No 10
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.80 E-value=5.4e-19 Score=126.41 Aligned_cols=86 Identities=20% Similarity=0.285 Sum_probs=75.5
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--C
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--D 81 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~ 81 (306)
+.+.|.|.|. .++|||+|.++.. ..+||+.|.++|+|+++|.|++||+|++|||+++.+++|.+++.+|+.+ +
T Consensus 5 ~~k~V~l~K~-~~~LG~tI~~~g~----g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g 79 (95)
T 3gge_A 5 IEKEVNVYKS-EDSLGLTITDNGV----GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKE 79 (95)
T ss_dssp EEEEEEEECC-SSCCCEEEECSSS----SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTT
T ss_pred eEEEEEEEEC-CCCceEEEEcCCC----CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCC
Confidence 4578999995 4899999996533 3499999999999999999999999999999999999999999999997 4
Q ss_pred CeEEEEEEeCCCC
Q psy8436 82 SHVEIVICRNPDD 94 (306)
Q Consensus 82 ~~v~L~v~r~~~~ 94 (306)
..++|++.++.+.
T Consensus 80 ~~~~L~lv~p~~~ 92 (95)
T 3gge_A 80 ELFTMKLIEPKKS 92 (95)
T ss_dssp CEEEEEEEEECSC
T ss_pred CEEEEEEECcccc
Confidence 4799999887543
No 11
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.78 E-value=1.7e-18 Score=121.57 Aligned_cols=77 Identities=18% Similarity=0.324 Sum_probs=71.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..|+|.|.|++.++|||++.+ | +|..|.++|||+++| |+.||+|++|||+++.+++|++++++|+.++..
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~--------g-~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~ 73 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKN--------G-KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILSTSGTV 73 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEET--------T-EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred ceEEEEEEECCCCCeEEEEEC--------C-EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCE
Confidence 468999999888899999984 3 378999999999999 999999999999999999999999999999999
Q ss_pred EEEEEEe
Q psy8436 84 VEIVICR 90 (306)
Q Consensus 84 v~L~v~r 90 (306)
|+|+|..
T Consensus 74 V~L~v~p 80 (82)
T 1r6j_A 74 VTITIMP 80 (82)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999864
No 12
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.77 E-value=5.2e-18 Score=121.31 Aligned_cols=78 Identities=23% Similarity=0.238 Sum_probs=70.0
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
...++.|+|.|.. ++|||+|.++.. ..+||++|.++|+|+++|.|++||+|++|||+++.+++|.|++++||+
T Consensus 3 ~g~~k~V~l~K~~--~~LG~tI~~~g~-----g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~ 75 (95)
T 3gge_A 3 KGIEKEVNVYKSE--DSLGLTITDNGV-----GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKE 75 (95)
T ss_dssp CEEEEEEEEECCS--SCCCEEEECSSS-----SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCeEEEEEEEECC--CCceEEEEcCCC-----CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 3667899999985 799999986432 468999999999999999999999999999999999999999999999
Q ss_pred cCCCc
Q psy8436 298 IFPQS 302 (306)
Q Consensus 298 ~~~~~ 302 (306)
.+.+.
T Consensus 76 ~~~g~ 80 (95)
T 3gge_A 76 LKKEE 80 (95)
T ss_dssp SCTTC
T ss_pred CCCCC
Confidence 98765
No 13
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.76 E-value=7.1e-18 Score=127.54 Aligned_cols=89 Identities=28% Similarity=0.424 Sum_probs=79.8
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCC-CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGG-AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~-~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
..++|.|.|.++.+|||+|.++... ....|+||..|.++|||+++|+|++||+|++|||+++.++++++++.+|+.+++
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~ 103 (118)
T 3b76_A 24 HEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSS 103 (118)
T ss_dssp EEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCS
T ss_pred CcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 4688999998889999999998532 123589999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCC
Q psy8436 83 HVEIVICRNP 92 (306)
Q Consensus 83 ~v~L~v~r~~ 92 (306)
.|.|+|.|..
T Consensus 104 ~v~L~v~R~~ 113 (118)
T 3b76_A 104 SIVLKALEVK 113 (118)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEECC
Confidence 9999998853
No 14
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.75 E-value=2.9e-18 Score=127.85 Aligned_cols=90 Identities=24% Similarity=0.358 Sum_probs=79.6
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC---
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--- 80 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--- 80 (306)
+.++|.|.|++..+|||+|.++.......|+||..|.++|||+++|+|++||+|++|||+++.+++|++++.+|+.+
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~ 84 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHK 84 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTS
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccC
Confidence 57889999877889999999985433346899999999999999999999999999999999999999999999987
Q ss_pred CCeEEEEEEeCCC
Q psy8436 81 DSHVEIVICRNPD 93 (306)
Q Consensus 81 ~~~v~L~v~r~~~ 93 (306)
+..|.|+|.|...
T Consensus 85 ~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 85 PGPIVLTVAKSGG 97 (108)
T ss_dssp SSCEEEEEECCCC
T ss_pred CCeEEEEEEeCCC
Confidence 4579999998653
No 15
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.75 E-value=1.8e-17 Score=120.69 Aligned_cols=89 Identities=22% Similarity=0.333 Sum_probs=80.5
Q ss_pred ccccEEEEEEeC-CCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 2 EKQFKVFRVVKD-DSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 2 ~~~~~~v~l~r~-~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
|.+..+|.|.|. ++.+|||++.++... .|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.+
T Consensus 1 e~~~~~v~l~k~~~~~~lG~~~~~~~~~---~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 77 (95)
T 2vwr_A 1 SMEILQVALHKRDSGEQLGIKLVRRTDE---PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS 77 (95)
T ss_dssp CEEEEEEEEECSSTTCCCCEEEEECSSS---CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CcEEEEEEEEECCCCCcccEEEEeccCC---CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 457889999996 567999999987654 5899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEeCCC
Q psy8436 81 DSHVEIVICRNPD 93 (306)
Q Consensus 81 ~~~v~L~v~r~~~ 93 (306)
+..+.|+|.|...
T Consensus 78 g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 78 GERVNLTIARPGK 90 (95)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCEEEEEEEcCCc
Confidence 9999999998654
No 16
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.74 E-value=1.7e-17 Score=120.33 Aligned_cols=88 Identities=27% Similarity=0.436 Sum_probs=77.2
Q ss_pred CccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 1 MEKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 1 ~~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
.|+.+|.|.|.|. +++|||++.++... .+++|..|.++|||+++|+|+.||+|++|||+++.+++|++++.+|+.+
T Consensus 1 ~~~~~r~v~l~k~-~~~lG~~i~~~~~~---~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 76 (93)
T 3o46_A 1 GSDSVKIIRLVKN-REPLGATIKKDEQT---GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS 76 (93)
T ss_dssp ---CCEEEEEEES-SSCCCEEEEECTTT---CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCccEEEEEEEeC-CCCccEEEEecCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3678999999996 56999999987332 5799999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEeCC
Q psy8436 81 DSHVEIVICRNP 92 (306)
Q Consensus 81 ~~~v~L~v~r~~ 92 (306)
++.|.|+|.+..
T Consensus 77 ~~~v~l~v~~~~ 88 (93)
T 3o46_A 77 QGAITFKIIPGS 88 (93)
T ss_dssp CEEEEEEEECC-
T ss_pred CCeEEEEEEeCC
Confidence 889999998754
No 17
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.74 E-value=6.1e-18 Score=128.44 Aligned_cols=91 Identities=22% Similarity=0.407 Sum_probs=75.8
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
...++|.|.|.++++|||+|.++.... ...|+||..|.++|||+++|.|++||+|++|||+++.+++|.+++.+++.++
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 102 (120)
T 2iwo_A 23 MGLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS 102 (120)
T ss_dssp --CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC
T ss_pred CCcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 457899999988789999999985311 1247999999999999999559999999999999999999999999999999
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
+.|+|+|.|...
T Consensus 103 ~~v~l~v~r~g~ 114 (120)
T 2iwo_A 103 GSIEMQVVAGGD 114 (120)
T ss_dssp SEEEEEEECCTT
T ss_pred CeEEEEEEECCc
Confidence 999999999754
No 18
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.74 E-value=2.6e-17 Score=119.07 Aligned_cols=87 Identities=22% Similarity=0.330 Sum_probs=79.1
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
.+.++|.|.|.++.+|||++.++... .|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+++.++.
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~~---~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 79 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRND---TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLG 79 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSSS---CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred ceEEEEEEEeCCCCcccEEEEeccCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 35788999998889999999987543 589999999999999999999999999999999999999999999999888
Q ss_pred eEEEEEEeCC
Q psy8436 83 HVEIVICRNP 92 (306)
Q Consensus 83 ~v~L~v~r~~ 92 (306)
.+.|+|.|..
T Consensus 80 ~v~l~v~R~~ 89 (92)
T 2qg1_A 80 TVTLEVGRIS 89 (92)
T ss_dssp EEEEEEECCC
T ss_pred eEEEEEEccc
Confidence 9999999875
No 19
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.74 E-value=1.9e-17 Score=123.56 Aligned_cols=88 Identities=28% Similarity=0.475 Sum_probs=78.2
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC-
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD- 81 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~- 81 (306)
.+++.|.|.|. .+|||+|.|+.......++||..|.++|||+++|+|++||+|++|||+++.+++|++++++|+.+.
T Consensus 14 ~~~~~v~l~k~--~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~ 91 (109)
T 1wi4_A 14 PAFRVITVTKE--TGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKL 91 (109)
T ss_dssp TTEEEEEECCS--SCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCC
T ss_pred CcEEEEEEeCC--CccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcccc
Confidence 46889999884 699999999865444458999999999999999999999999999999999999999999999875
Q ss_pred ---CeEEEEEEeCC
Q psy8436 82 ---SHVEIVICRNP 92 (306)
Q Consensus 82 ---~~v~L~v~r~~ 92 (306)
..+.|.|.|..
T Consensus 92 r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 92 RSESPWEIAFIRSG 105 (109)
T ss_dssp SSSSCEEEEEECCC
T ss_pred CCCceEEEEEEeCC
Confidence 57899998864
No 20
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.73 E-value=6.7e-17 Score=149.24 Aligned_cols=59 Identities=24% Similarity=0.432 Sum_probs=50.6
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+.++ .+...++.. .++.|.|+|.|+..
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 323 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGK 323 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 589999999999999999 999999999999999954 556666554 47899999999753
No 21
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.73 E-value=1.9e-17 Score=118.70 Aligned_cols=85 Identities=22% Similarity=0.449 Sum_probs=75.7
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
.+|+|.|.|.++.+|||+|.++.. .+++|..|.++|||++++.|++||+|++|||+++.+++|+++..+|+.++..
T Consensus 1 ~~r~V~l~K~~~~~lG~~i~~~~~----~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~ 76 (88)
T 1kwa_A 1 RSRLVQFQKNTDEPMGITLKMNEL----NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGS 76 (88)
T ss_dssp CCEEEEEEECSSSCCCEEEECSCG----GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEE
T ss_pred CeEEEEEEeCCCCceeEEEEeCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCc
Confidence 478999999888999999997532 3699999999999999444999999999999999999999999999998778
Q ss_pred EEEEEEeCC
Q psy8436 84 VEIVICRNP 92 (306)
Q Consensus 84 v~L~v~r~~ 92 (306)
|.|+|.|..
T Consensus 77 v~l~v~r~~ 85 (88)
T 1kwa_A 77 ITFKIVPSY 85 (88)
T ss_dssp EEEEEECCC
T ss_pred EEEEEECCc
Confidence 999998864
No 22
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.73 E-value=1.7e-17 Score=122.58 Aligned_cols=89 Identities=29% Similarity=0.456 Sum_probs=78.5
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
.+++|.|.|..+.+|||+|.++.... .+++|..|.++|||++++.|++||+|++|||+++.++++.+++.+++.+++.
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~g~~~~--~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 86 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITGGKEHG--VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE 86 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEEEGGGT--EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSE
T ss_pred CcEEEEEEeCCCCccCEEEEeccCCC--CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 46889999988899999999885432 4799999999999999733999999999999999999999999999999899
Q ss_pred EEEEEEeCCCC
Q psy8436 84 VEIVICRNPDD 94 (306)
Q Consensus 84 v~L~v~r~~~~ 94 (306)
|+|+|.+....
T Consensus 87 v~l~v~~~~~~ 97 (103)
T 2dc2_A 87 IEFEVVYVALE 97 (103)
T ss_dssp EEEEEEECC--
T ss_pred EEEEEEecCCc
Confidence 99999987654
No 23
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.73 E-value=1.9e-17 Score=118.48 Aligned_cols=84 Identities=31% Similarity=0.513 Sum_probs=76.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcc-cCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHR-DGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~-~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
+++.|.|.|+++.+|||++.++.... .+++|..|.++|||++ +| |++||+|++|||+++.+++|.+++.+++.+++
T Consensus 2 ~~~~v~l~~~~~~~lG~~i~~~~~~~--~~~~V~~V~~gspA~~~ag-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 78 (87)
T 4e34_A 2 PIRKVLLLKEDHEGLGISITGGKEHG--VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 78 (87)
T ss_dssp CCEEEEEECCTTBCCCEEEEEEGGGT--EEEEEEEECTTSHHHHHSC-CCTTEEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CEEEEEEEECCCCcccEEEEccCCCC--CCEEEEEECCCCHHHhcCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 57899999988889999999885432 5799999999999999 47 99999999999999999999999999999988
Q ss_pred eEEEEEEe
Q psy8436 83 HVEIVICR 90 (306)
Q Consensus 83 ~v~L~v~r 90 (306)
.+.|+|.+
T Consensus 79 ~v~l~v~~ 86 (87)
T 4e34_A 79 EIEFEVVY 86 (87)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 99999865
No 24
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.73 E-value=2.1e-17 Score=123.25 Aligned_cols=90 Identities=29% Similarity=0.413 Sum_probs=78.9
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCC--CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGG--AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN 79 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~--~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~ 79 (306)
+.++++|.|.|.. .+|||+|.++... ....|++|..|.++|||+++|+|++||+|++|||+++.+++|++++.+|+.
T Consensus 13 ~~~~~~v~l~k~~-~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 13 SPEVKIVELVKDC-KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp CSSCEEEEEEECS-SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred CCceEEEEEEECC-CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4578999999965 6999999997541 123689999999999999999999999999999999999999999999999
Q ss_pred C-CCeEEEEEEeCC
Q psy8436 80 K-DSHVEIVICRNP 92 (306)
Q Consensus 80 ~-~~~v~L~v~r~~ 92 (306)
+ +..|.|+|.|..
T Consensus 92 ~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 92 VPPGLVHLGICSGP 105 (108)
T ss_dssp SCSEEEEEEEECCC
T ss_pred CCCCeEEEEEEcCC
Confidence 6 568999999864
No 25
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.73 E-value=2.8e-17 Score=118.37 Aligned_cols=88 Identities=31% Similarity=0.346 Sum_probs=78.9
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
..+.++|.|.|..+.+|||++.++.... .|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++.++
T Consensus 2 ~~~~~~v~l~k~~~~~lG~~i~~~~~~~--~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 79 (90)
T 1qav_A 2 SLQRRRVTVRKADAGGLGISIKGGRENK--MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTG 79 (90)
T ss_dssp CSSCEEEEEECCTTTCCCEEEEEEGGGT--EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CCccEEEEEEeCCCCCcCEEEEcccCCC--CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 4568999999988899999999875432 57999999999999999449999999999999999999999999999998
Q ss_pred CeEEEEEEeC
Q psy8436 82 SHVEIVICRN 91 (306)
Q Consensus 82 ~~v~L~v~r~ 91 (306)
..+.|+|.|.
T Consensus 80 ~~v~l~v~r~ 89 (90)
T 1qav_A 80 KEVVLEVKYM 89 (90)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEe
Confidence 8999999874
No 26
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.73 E-value=5.5e-17 Score=119.44 Aligned_cols=91 Identities=22% Similarity=0.433 Sum_probs=78.8
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN-- 79 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~-- 79 (306)
..+++.|.|.|..+.+|||+|.+...+...++++|..|.++|||+++|.|++||+|++|||+++.+++++++..+|+.
T Consensus 7 ~~~~~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 7 GDNCREVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETK 86 (101)
T ss_dssp TCCCEEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTT
T ss_pred CCceEEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 357899999998888999999864433334579999999999999976699999999999999999999999999998
Q ss_pred CCCeEEEEEEeCC
Q psy8436 80 KDSHVEIVICRNP 92 (306)
Q Consensus 80 ~~~~v~L~v~r~~ 92 (306)
.+..|+|+|.|..
T Consensus 87 ~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 87 SQTSVTLSIVHCP 99 (101)
T ss_dssp TSSEEEEEECCCC
T ss_pred CCCeEEEEEEeCC
Confidence 6789999998864
No 27
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.73 E-value=5.6e-17 Score=119.63 Aligned_cols=92 Identities=25% Similarity=0.358 Sum_probs=80.8
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
+-+++.|.|.|. ..+|||+|.++.+.. ...|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++
T Consensus 2 ~~~~~~v~l~k~-~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 80 (102)
T 2i1n_A 2 MFKYEEIVLERG-NSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALK 80 (102)
T ss_dssp CEEEEEEEEECB-TTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CceEEEEEEEEC-CCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 346789999995 679999999985421 1358999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCCC
Q psy8436 79 NKDSHVEIVICRNPDD 94 (306)
Q Consensus 79 ~~~~~v~L~v~r~~~~ 94 (306)
.++..+.|+|.|....
T Consensus 81 ~~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 81 EAGPVVRLVVRRRQPP 96 (102)
T ss_dssp HSCSEEEEEEEEECCC
T ss_pred cCCCeEEEEEEeCCCC
Confidence 9989999999997643
No 28
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.73 E-value=6.7e-17 Score=117.36 Aligned_cols=88 Identities=27% Similarity=0.442 Sum_probs=77.8
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
++++|.|.|. ..+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.+
T Consensus 3 ~~~~v~l~k~-~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (94)
T 2fe5_A 3 TIMEVNLLKG-PKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNT 81 (94)
T ss_dssp CEEEEEEECC-TTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTC
T ss_pred EEEEEEEEEC-CCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 5789999996 569999999985432 224899999999999999999999999999999999999999999999988
Q ss_pred CCeEEEEEEeCC
Q psy8436 81 DSHVEIVICRNP 92 (306)
Q Consensus 81 ~~~v~L~v~r~~ 92 (306)
++.|.|+|.|..
T Consensus 82 ~~~v~l~v~R~g 93 (94)
T 2fe5_A 82 SDMVYLKVAKPG 93 (94)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEcCC
Confidence 889999998864
No 29
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.72 E-value=5.3e-17 Score=125.30 Aligned_cols=91 Identities=16% Similarity=0.265 Sum_probs=80.4
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCC---------c-CCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHH
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGA---------H-FSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQ 71 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~---------~-~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~ 71 (306)
..+.|+|.|.|...++|||+|.++.... . ..|++|..|.++|||+++| |+.||+|++|||+++.+++++
T Consensus 25 ~~~~r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~ 103 (132)
T 3l4f_D 25 IIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHR 103 (132)
T ss_dssp CCCCCEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHH
T ss_pred CCCCEEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 4567899999988889999999996531 1 1279999999999999999 999999999999999999999
Q ss_pred HHHHHHhcCCCeEEEEEEeCCC
Q psy8436 72 EAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 72 ~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
+++.+|+.++..+.|+|.+...
T Consensus 104 ~~~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 104 QVVNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp HHHHHHHHTTTEEEEEEECCCC
T ss_pred HHHHHHHcCCCEEEEEEEECCC
Confidence 9999999999999999988653
No 30
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.72 E-value=4.3e-17 Score=125.61 Aligned_cols=86 Identities=28% Similarity=0.499 Sum_probs=76.0
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
...++.|.|.|.. .+|||+|.|+.+.+.+..++||..|.++++|+++|+|++||+|++|||+++.+++|++|+++|+.
T Consensus 27 ~~~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 104 (130)
T 1i16_A 27 EATVCTVTLEKMS--AGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKA 104 (130)
T ss_dssp SEEEEEEEEETTS--SSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHT
T ss_pred CCcEEEEEEEcCC--CccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3567889999874 68999999998865555789999999999999996699999999999999999999999999999
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
.+...+.|
T Consensus 105 ~~~~~v~l 112 (130)
T 1i16_A 105 LPDGPVTI 112 (130)
T ss_dssp SCSSEEEE
T ss_pred CCCceEEE
Confidence 98776654
No 31
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.72 E-value=3.8e-17 Score=119.64 Aligned_cols=90 Identities=23% Similarity=0.350 Sum_probs=79.6
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC----cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA----HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~----~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
..+++|.|.|....+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++
T Consensus 4 e~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 83 (98)
T 1ihj_A 4 ELIHMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIK 83 (98)
T ss_dssp CEEEEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 347889999988889999999885432 1248999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCC
Q psy8436 79 NKDSHVEIVICRNP 92 (306)
Q Consensus 79 ~~~~~v~L~v~r~~ 92 (306)
..+..+.|+|.|..
T Consensus 84 ~~g~~v~l~v~R~g 97 (98)
T 1ihj_A 84 EADFKIELEIQTFD 97 (98)
T ss_dssp HSCSEEEEEEEEC-
T ss_pred cCCCeEEEEEEeCC
Confidence 98889999999864
No 32
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.72 E-value=6.8e-17 Score=119.81 Aligned_cols=91 Identities=27% Similarity=0.460 Sum_probs=79.1
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN 79 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~ 79 (306)
..+++|.|.|.. .+|||+|.++.+.. ...|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 2 e~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 2 EKIMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp -CEEEEEEECBT-TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred CeEEEEEEEECC-CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 357789999966 69999999985432 12489999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEEeCCCC
Q psy8436 80 KDSHVEIVICRNPDD 94 (306)
Q Consensus 80 ~~~~v~L~v~r~~~~ 94 (306)
++..|.|+|.|....
T Consensus 81 ~~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 81 TSDFVYLKVAKPTSM 95 (105)
T ss_dssp CCSEEEEEEECCCC-
T ss_pred CCCeEEEEEEcCCCC
Confidence 988999999997644
No 33
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.72 E-value=5.8e-17 Score=122.51 Aligned_cols=89 Identities=28% Similarity=0.408 Sum_probs=79.0
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN 79 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~ 79 (306)
.+++.|.|.|.. .+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++++++.+++.
T Consensus 23 ~~~~~v~l~k~~-~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 101 (117)
T 2byg_A 23 MTVVEIKLFKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN 101 (117)
T ss_dssp EEEEEEEEECBT-TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred CceEEEEEEeCC-CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 467889999865 79999999985432 13589999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEEeCC
Q psy8436 80 KDSHVEIVICRNP 92 (306)
Q Consensus 80 ~~~~v~L~v~r~~ 92 (306)
++..|+|+|.|..
T Consensus 102 ~g~~v~l~v~R~~ 114 (117)
T 2byg_A 102 TSEVVYLKVGKPT 114 (117)
T ss_dssp CCSEEEEEEEEEE
T ss_pred CCCeEEEEEEeCC
Confidence 9899999999864
No 34
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.72 E-value=3.9e-17 Score=125.60 Aligned_cols=92 Identities=17% Similarity=0.391 Sum_probs=81.6
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCC-CCCHHHHHHHHhcC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLK-GLTIQEAREALNNK 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~-~~~~~~a~~~l~~~ 80 (306)
.+++.|.|.|....+|||+|.++.... ...|+||..|.++|||+++|+|++||+|++|||+++. +++|++++.+|+.+
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 103 (128)
T 2db5_A 24 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQT 103 (128)
T ss_dssp CEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHC
T ss_pred CceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 467899999987789999999885432 1248999999999999999999999999999999997 99999999999999
Q ss_pred CCeEEEEEEeCCCC
Q psy8436 81 DSHVEIVICRNPDD 94 (306)
Q Consensus 81 ~~~v~L~v~r~~~~ 94 (306)
+..|.|+|.|....
T Consensus 104 ~~~v~l~v~r~~~~ 117 (128)
T 2db5_A 104 TGSLRLIVAREPVH 117 (128)
T ss_dssp CSEEEEEEEECCCS
T ss_pred CCeEEEEEEcCCCC
Confidence 89999999997643
No 35
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.72 E-value=9.2e-17 Score=118.23 Aligned_cols=89 Identities=25% Similarity=0.344 Sum_probs=78.9
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
..+.|.|.|.. .+|||+|.++.... ...|++|..|.++|||+++|+|+.||+|++|||+++.++++.++..+++.+
T Consensus 7 ~~~~v~l~~~~-~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 85 (101)
T 2jik_A 7 TEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA 85 (101)
T ss_dssp EEEEEEEECCT-TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC
T ss_pred ccEEEEEEeCC-CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 57889999965 79999999985432 135899999999999999999999999999999999999999999999988
Q ss_pred CCeEEEEEEeCCC
Q psy8436 81 DSHVEIVICRNPD 93 (306)
Q Consensus 81 ~~~v~L~v~r~~~ 93 (306)
+..+.|+|.|...
T Consensus 86 g~~v~l~v~R~~~ 98 (101)
T 2jik_A 86 GYAVSLRVQHRLE 98 (101)
T ss_dssp CSEEEEEEEEESC
T ss_pred CCeEEEEEEeCCC
Confidence 8899999988653
No 36
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.72 E-value=8.5e-17 Score=119.71 Aligned_cols=91 Identities=21% Similarity=0.321 Sum_probs=79.8
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCC------CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGG------AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEARE 75 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~------~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~ 75 (306)
|.+.++|.|.|. ..+|||+|.++... ....|+||..|.++|||+++|.|++||+|++|||+++.+++|.+++.
T Consensus 6 ~~~~~~v~l~k~-~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~ 84 (107)
T 1uhp_A 6 SGKSLTLVLHRD-SGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVE 84 (107)
T ss_dssp SSEEEEEEECCS-SSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHH
T ss_pred CcEEEEEEEEeC-CCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 567889999996 78999999987532 12368999999999999999449999999999999999999999999
Q ss_pred HHhcCCCeEEEEEEeCCC
Q psy8436 76 ALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 76 ~l~~~~~~v~L~v~r~~~ 93 (306)
+++.++..|.|+|.|...
T Consensus 85 ~~~~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 85 AFKTAKEPIVVQVLRRTS 102 (107)
T ss_dssp HHHHCCSSEEEEEEECCS
T ss_pred HHHcCCCcEEEEEEeCCC
Confidence 999998999999998754
No 37
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.72 E-value=1e-16 Score=115.40 Aligned_cols=86 Identities=17% Similarity=0.377 Sum_probs=78.0
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+...|+|.|.|.. .+|||++.++... .|++|..|.++|||+++| |++||+|++|||+++.+++|+++..+|+.++
T Consensus 2 ~~~~r~v~l~k~~-~g~G~~~~~~~~~---~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2he4_A 2 MLRPRLCHLRKGP-QGYGFNLHSDKSR---PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKARE 76 (90)
T ss_dssp TTCCEEEEEECBT-TBCCEEEEECSSS---SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSS
T ss_pred CCCcEEEEEEECC-CCccEEEEccCCC---CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3467899999965 5999999987653 589999999999999999 9999999999999999999999999999998
Q ss_pred CeEEEEEEeCC
Q psy8436 82 SHVEIVICRNP 92 (306)
Q Consensus 82 ~~v~L~v~r~~ 92 (306)
..+.|+|.|..
T Consensus 77 ~~v~l~v~r~~ 87 (90)
T 2he4_A 77 DEARLLVVGPS 87 (90)
T ss_dssp SEEEEEEECCC
T ss_pred CcEEEEEEccC
Confidence 89999999865
No 38
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.72 E-value=2.5e-17 Score=126.96 Aligned_cols=91 Identities=29% Similarity=0.362 Sum_probs=78.4
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCc-CCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAH-FSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~-~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
+.+++.|.|.|. ..+|||+|.++....+ ..++||..|.++|||+++|.|++||+|++|||+++.+++|++++.+|+.+
T Consensus 27 ~~~~~~v~l~k~-~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 105 (130)
T 1i16_A 27 EATVCTVTLEKM-SAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL 105 (130)
T ss_dssp SEEEEEEEEETT-SSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS
T ss_pred CCcEEEEEEEcC-CCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 457889999995 5799999999865221 25799999999999999955999999999999999999999999999998
Q ss_pred CC-eEEEEEEeCCC
Q psy8436 81 DS-HVEIVICRNPD 93 (306)
Q Consensus 81 ~~-~v~L~v~r~~~ 93 (306)
+. .|.|+|.|...
T Consensus 106 ~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 106 PDGPVTIVIRRKSL 119 (130)
T ss_dssp CSSEEEEEEEEESS
T ss_pred CCceEEEEEEeCCC
Confidence 55 59999988643
No 39
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.71 E-value=6.8e-17 Score=122.21 Aligned_cols=91 Identities=21% Similarity=0.307 Sum_probs=79.6
Q ss_pred ccEEEEEEeCC------CCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHH
Q psy8436 4 QFKVFRVVKDD------SNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAR 74 (306)
Q Consensus 4 ~~~~v~l~r~~------~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~ 74 (306)
.++.|.|.|.. +.+|||+|.++.... ...|+||..|.++|||+++|+|++||+|++|||+++.+++|.+++
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 91 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQ 91 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 46788899976 579999999885421 123799999999999999999999999999999999999999999
Q ss_pred HHHhcCCCeEEEEEEeCCCC
Q psy8436 75 EALNNKDSHVEIVICRNPDD 94 (306)
Q Consensus 75 ~~l~~~~~~v~L~v~r~~~~ 94 (306)
.+|+.++..|.|+|.|....
T Consensus 92 ~~l~~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 92 SIISQQSGEAEICVRLDLNM 111 (117)
T ss_dssp HHHSCCSSCEEEEEESSCCC
T ss_pred HHHhcCCCEEEEEEEECCcc
Confidence 99999989999999987543
No 40
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.71 E-value=1.3e-16 Score=115.11 Aligned_cols=85 Identities=19% Similarity=0.310 Sum_probs=76.8
Q ss_pred cccEEEEEEeCCC-CceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 3 KQFKVFRVVKDDS-NELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 3 ~~~~~v~l~r~~~-~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
.+++.|.|.|+.+ .+|||+|.++... .|++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++..+
T Consensus 5 ~~~~~v~l~k~~~~~~~G~~~~~~~~~---~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 80 (91)
T 1m5z_A 5 VELHKVTLYKDSGMEDFGFSVADGLLE---KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAESG 80 (91)
T ss_dssp CEEEEEEEECCTTCSSSSEEEEECTTS---SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTST
T ss_pred cceEEEEEEECCCCCCccEEEEeccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4678999999765 5899999987543 589999999999999999 9999999999999999999999999999888
Q ss_pred CeEEEEEEeC
Q psy8436 82 SHVEIVICRN 91 (306)
Q Consensus 82 ~~v~L~v~r~ 91 (306)
..+.|+|.|+
T Consensus 81 ~~v~l~v~R~ 90 (91)
T 1m5z_A 81 NKLDLVISRN 90 (91)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEeC
Confidence 8999999885
No 41
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.71 E-value=1.7e-16 Score=115.87 Aligned_cols=89 Identities=27% Similarity=0.446 Sum_probs=78.4
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+.++++|.|.+ ..++|||++.++.... .+++|..|.++|||+++|+|+.||+|++|||+++.+++++++..+|+..+
T Consensus 3 ~~~~~~v~l~~-~~~~lG~~i~~~~~~~--~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 79 (97)
T 1n7e_A 3 GAIIYTVELKR-YGGPLGITISGTEEPF--DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAG 79 (97)
T ss_dssp CCCEEEEEEEC-TTSCCCEEEECCSSTT--SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred CceEEEEEEEe-CCCCcCEEEEcccCCC--CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35678899977 5678999999875432 57999999999999999999999999999999999999999999999888
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
..|.|+|.|...
T Consensus 80 ~~v~l~v~R~~~ 91 (97)
T 1n7e_A 80 ETVTLKIKKQTD 91 (97)
T ss_dssp SEEEEEEECCCC
T ss_pred CeEEEEEEeCCC
Confidence 899999998754
No 42
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.71 E-value=6.5e-17 Score=122.35 Aligned_cols=91 Identities=16% Similarity=0.274 Sum_probs=80.9
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC-------cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA-------HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEARE 75 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~-------~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~ 75 (306)
...++|.|.|..+.+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 93 (117)
T 2ehr_A 14 GPPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVE 93 (117)
T ss_dssp CCCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred CCCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 357899999988889999999885421 1358999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEEEEeCCC
Q psy8436 76 ALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 76 ~l~~~~~~v~L~v~r~~~ 93 (306)
+++.++..|.|+|.|...
T Consensus 94 ~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 94 AIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp HHHTSCSSEEEEECCBSC
T ss_pred HHHcCCCeEEEEEEECCC
Confidence 999998999999988654
No 43
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.71 E-value=1.2e-16 Score=120.80 Aligned_cols=91 Identities=22% Similarity=0.366 Sum_probs=80.5
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
...+.|.|.|+.+.+|||+|.++.... ..++||..|.++|||+++|+|++||+|++|||+++.+++|++++.+|+.++.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~i~~~~~~~-~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~ 92 (117)
T 1v62_A 14 SGPLMVEIVKTPGSALGISLTTTSLRN-KSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISE 92 (117)
T ss_dssp SSSEEEEEECCTTCCCCCEEEEECCSS-SCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSS
T ss_pred CCcEEEEEEcCCCCcccEEEEccCCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 357889999988889999999875421 1349999999999999999999999999999999999999999999998899
Q ss_pred eEEEEEEeCCCC
Q psy8436 83 HVEIVICRNPDD 94 (306)
Q Consensus 83 ~v~L~v~r~~~~ 94 (306)
.|.|+|.|....
T Consensus 93 ~v~l~v~r~~~~ 104 (117)
T 1v62_A 93 KVRLEILPVPQS 104 (117)
T ss_dssp EEEEEECCBTTB
T ss_pred eEEEEEEECCCC
Confidence 999999987653
No 44
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.71 E-value=1.2e-16 Score=122.25 Aligned_cols=87 Identities=23% Similarity=0.232 Sum_probs=79.4
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..++|.|.|....+|||++.++.... .+++|..|.++|||+++|+|+.||+|++|||+++.+++|++++.+++.+++.
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~gg~~~~--~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 96 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGGGAQYC--PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE 96 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEECSSCC--SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE
T ss_pred CCeEEEEEeCCCCCcCEEEeccCCCC--CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 45788999988889999999986543 6899999999999999999999999999999999999999999999999889
Q ss_pred EEEEEEeCC
Q psy8436 84 VEIVICRNP 92 (306)
Q Consensus 84 v~L~v~r~~ 92 (306)
|.|+|.|..
T Consensus 97 v~l~v~r~~ 105 (125)
T 3hpk_A 97 VTIHYNKLQ 105 (125)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEECC
Confidence 999998843
No 45
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.71 E-value=6.5e-17 Score=117.65 Aligned_cols=85 Identities=21% Similarity=0.497 Sum_probs=76.3
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
-+.+.|.|.|..+++|||++..... .|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+..+.
T Consensus 11 ~~~~~v~l~K~~~~~lG~~l~~~~~----~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~ 86 (97)
T 2ejy_A 11 HMVRLIQFEKVTEEPMGICLKLNEK----QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKG 86 (97)
T ss_dssp --CEEEEEEECSSSCCSEEEEECTT----CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCE
T ss_pred CccEEEEEEeCCCCCeeEEEEeCCC----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3678999999999999999987543 479999999999999999999999999999999999999999999999888
Q ss_pred eEEEEEEeC
Q psy8436 83 HVEIVICRN 91 (306)
Q Consensus 83 ~v~L~v~r~ 91 (306)
.+.|+|.+.
T Consensus 87 ~v~L~V~~~ 95 (97)
T 2ejy_A 87 MISLKVIPN 95 (97)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEEC
Confidence 899999754
No 46
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.71 E-value=3.2e-16 Score=119.59 Aligned_cols=90 Identities=20% Similarity=0.332 Sum_probs=79.2
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK- 80 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~- 80 (306)
+.+.++|.|.|. ..+|||+|.++.... .|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+.+
T Consensus 17 ~~~~~~v~l~~~-~~glG~~~~~g~~~~--~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 93 (123)
T 1ueq_A 17 KGTFLSTTLKKS-NMGFGFTIIGGDEPD--EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVP 93 (123)
T ss_dssp CSEEEEEEEECC-TTSCSEEEECCSSSS--CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSC
T ss_pred CCcEEEEEEEeC-CCceeEEEecccCCC--CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 456778999985 569999999875432 5799999999999999999999999999999999999999999999994
Q ss_pred -CCeEEEEEEeCCCC
Q psy8436 81 -DSHVEIVICRNPDD 94 (306)
Q Consensus 81 -~~~v~L~v~r~~~~ 94 (306)
+..|.|+|.|....
T Consensus 94 ~g~~v~l~v~R~~~~ 108 (123)
T 1ueq_A 94 IGQSVNLVLCRGYPL 108 (123)
T ss_dssp TTCEEEEEEEESCCC
T ss_pred CCCeEEEEEEeCCCC
Confidence 68999999997644
No 47
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.70 E-value=5.6e-17 Score=120.72 Aligned_cols=87 Identities=15% Similarity=0.311 Sum_probs=78.1
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccC-CCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDG-RFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G-~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
..+++|.|.|....+|||++.++.... .+++|..|.++|||+++| +|+.||+|++|||+++.+++|.+++.+++.++
T Consensus 16 ~~~~~v~l~~~~~~~~G~~~~gg~~~~--~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 93 (107)
T 3nfk_A 16 DNLVLIRMKPDENGRFGFNVKGGYDQK--MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASC 93 (107)
T ss_dssp CCCEEEEECCCTTSCCCEEEEEEGGGT--EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGG
T ss_pred CCEEEEEEEcCCCCCCCEEEEccCCCC--CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 468999999988789999999885432 479999999999999999 59999999999999999999999999999986
Q ss_pred C----eEEEEEEeC
Q psy8436 82 S----HVEIVICRN 91 (306)
Q Consensus 82 ~----~v~L~v~r~ 91 (306)
+ .|.|+|.|+
T Consensus 94 ~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 94 ERHSGELMLLVRPN 107 (107)
T ss_dssp GSBTTBEEEEEECC
T ss_pred ccCCcEEEEEEEcC
Confidence 5 899999873
No 48
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.70 E-value=2.2e-16 Score=115.06 Aligned_cols=89 Identities=27% Similarity=0.430 Sum_probs=78.3
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
.+.++|.|.|. ..+|||++.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.++
T Consensus 4 g~~~~v~l~k~-~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 4 GDIFEVELAKN-DNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp TCEEEEEEECS-SSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred CCEEEEEEEeC-CCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 35788999995 579999999874421 2358999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEEeCC
Q psy8436 82 SHVEIVICRNP 92 (306)
Q Consensus 82 ~~v~L~v~r~~ 92 (306)
..|.|+|.|..
T Consensus 83 ~~v~l~v~R~~ 93 (96)
T 1d5g_A 83 QVVHLLLEKGQ 93 (96)
T ss_dssp SEEEEEEECCS
T ss_pred CeEEEEEEcCC
Confidence 89999998864
No 49
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.70 E-value=1.4e-16 Score=117.93 Aligned_cols=87 Identities=26% Similarity=0.412 Sum_probs=78.8
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
..+.+.|.|.|. +.+|||++.++... .|++|..|.++|||+++|+|+.||+|++|||+++.++++.+++.+++.++
T Consensus 9 ~~~~~~v~l~k~-~~glG~~~~~~~~~---~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 84 (104)
T 3i4w_A 9 PREPRRIVIHRG-STGLGFNIVGGEXG---EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 84 (104)
T ss_dssp CSSCEEEEEECB-TTBTSEEEEECC-C---CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCccEEEEEEeC-CCccCEEEECCCCC---CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456889999996 56999999988654 58999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEeCC
Q psy8436 82 SHVEIVICRNP 92 (306)
Q Consensus 82 ~~v~L~v~r~~ 92 (306)
..+.|+|.|..
T Consensus 85 ~~v~l~v~r~~ 95 (104)
T 3i4w_A 85 QTVTIIAQYKP 95 (104)
T ss_dssp SEEEEEEEECH
T ss_pred CeEEEEEEECc
Confidence 99999999864
No 50
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.70 E-value=7e-17 Score=119.17 Aligned_cols=89 Identities=25% Similarity=0.354 Sum_probs=77.2
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-- 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-- 80 (306)
+..++|.|.| ...+|||+|.++.+.. .+.+||..|.+++||+++|+|++||+|++|||+++.+++|++++.+|+.+
T Consensus 5 ~~~~~v~l~k-~~~glG~~i~gg~~~~-~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 82 (103)
T 1ufx_A 5 SSGTLVRVKK-SAATLGIAIEGGANTR-QPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFK 82 (103)
T ss_dssp SSSEEEEEEC-CSSSCCEEEECBTTSS-CSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHH
T ss_pred CceEEEEEEc-CCCcCCeEEECCCCCC-CCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcc
Confidence 4578889977 5679999999986543 14569999999999999999999999999999999999999999999984
Q ss_pred ---CCeEEEEEEeCCC
Q psy8436 81 ---DSHVEIVICRNPD 93 (306)
Q Consensus 81 ---~~~v~L~v~r~~~ 93 (306)
++.+.|+|.|...
T Consensus 83 ~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 83 TKDRDYIDFLVTEFNS 98 (103)
T ss_dssp CSSCSEEEEEECCCCC
T ss_pred cCCCCeEEEEEEEccc
Confidence 6789999988754
No 51
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=115.94 Aligned_cols=87 Identities=30% Similarity=0.460 Sum_probs=77.3
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
...|+|.|.|. ..+|||++.++.... .+++|..|.++|||+++|.|++||+|++|||+++.++++.++..+++..+.
T Consensus 4 ~~~r~v~l~k~-~~glG~~l~~~~~~~--~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 80 (93)
T 2dkr_A 4 GSSGVVELPKT-DEGLGFNIMGGKEQN--SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQG 80 (93)
T ss_dssp SCSCEEEEECC-TTCCCEEEECSSSSS--CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCS
T ss_pred CCCEEEEEEeC-CCCccEEEecccCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 46789999995 579999999875432 589999999999999996699999999999999999999999999998888
Q ss_pred eEEEEEEeCC
Q psy8436 83 HVEIVICRNP 92 (306)
Q Consensus 83 ~v~L~v~r~~ 92 (306)
.+.|+|.|..
T Consensus 81 ~v~l~v~r~~ 90 (93)
T 2dkr_A 81 SVKLVVRSGP 90 (93)
T ss_dssp EEEEEECCCC
T ss_pred cEEEEEEeCC
Confidence 8999998864
No 52
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.70 E-value=1.3e-16 Score=118.75 Aligned_cols=90 Identities=29% Similarity=0.416 Sum_probs=77.9
Q ss_pred cccEEEEEEeCCCCceeEEEEe---cCCC-CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 3 KQFKVFRVVKDDSNELGIYIER---QDGG-AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~g---g~~~-~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
-+++.|.|.|. ..+|||+|.+ +... ....|+||..|.++|||+++|+|++||+|++|||+++.++++.+++.+++
T Consensus 8 ~~~~~v~l~k~-~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 86 (107)
T 1wf8_A 8 LELFPVELEKD-EDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLR 86 (107)
T ss_dssp EEEEEEEEECB-TTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHH
T ss_pred ceEEEEEEEEC-CCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 45678888885 5699999998 3221 12358999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCC
Q psy8436 79 NKDSHVEIVICRNPD 93 (306)
Q Consensus 79 ~~~~~v~L~v~r~~~ 93 (306)
.++..|.|+|.|...
T Consensus 87 ~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 87 NTKGNVRFVIGREKP 101 (107)
T ss_dssp HCCSEEEEEEEEECC
T ss_pred cCCCeEEEEEEeCCC
Confidence 999999999998754
No 53
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.70 E-value=1.6e-16 Score=118.46 Aligned_cols=83 Identities=19% Similarity=0.407 Sum_probs=72.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|++.|. .+|||+|.|+.+.... .++||..|.++|+|+++|+|++||+|++|||+++.+++|++++++|++.
T Consensus 14 ~~~~~v~l~k~---~glG~~i~gg~~~~~~-~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~ 89 (109)
T 1wi4_A 14 PAFRVITVTKE---TGLGLKILGGINRNEG-PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRA 89 (109)
T ss_dssp TTEEEEEECCS---SCCCEEEEECSSSSSC-SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHS
T ss_pred CcEEEEEEeCC---CccCEEEEeccCCCCC-CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcc
Confidence 45778888886 5799999998875432 3799999999999999999999999999999999999999999999998
Q ss_pred C---CCceec
Q psy8436 299 F---PQSSKL 305 (306)
Q Consensus 299 ~---~~~~~l 305 (306)
+ ...+.|
T Consensus 90 ~~r~~~~~~l 99 (109)
T 1wi4_A 90 KLRSESPWEI 99 (109)
T ss_dssp CCSSSSCEEE
T ss_pred ccCCCceEEE
Confidence 8 666554
No 54
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.69 E-value=1.9e-16 Score=117.21 Aligned_cols=87 Identities=21% Similarity=0.325 Sum_probs=78.2
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
...++|.|.|.++.+|||++.++.... .|++|..|.++|||+++| |++||+|++|||+++.++++++++.+|+. +.
T Consensus 14 ~~~~~v~l~k~~~~~lG~~~~~~~~~~--~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 89 (104)
T 1wi2_A 14 FLPRIVTLKKPPGAQLGFNIRGGKASQ--LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT-AR 89 (104)
T ss_dssp SCCEEEEECCCTTCCCSEEEECCSSSC--CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-SS
T ss_pred CCCEEEEEEeCCCCCccEEEEcccCCC--CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-CC
Confidence 457899999988889999999875432 589999999999999999 99999999999999999999999999998 68
Q ss_pred eEEEEEEeCCC
Q psy8436 83 HVEIVICRNPD 93 (306)
Q Consensus 83 ~v~L~v~r~~~ 93 (306)
.+.|+|.|...
T Consensus 90 ~v~l~v~r~~~ 100 (104)
T 1wi2_A 90 EISMRVRFFSG 100 (104)
T ss_dssp SEEEEEECCCC
T ss_pred EEEEEEEECCC
Confidence 89999998643
No 55
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.69 E-value=7.4e-17 Score=121.87 Aligned_cols=89 Identities=27% Similarity=0.422 Sum_probs=78.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
..++|.|.|.. .+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.+++
T Consensus 25 ~~~~v~L~k~~-~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 103 (117)
T 2fne_A 25 QCKSITLERGP-DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG 103 (117)
T ss_dssp EEEEEEECCBT-TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred ccEEEEEEeCC-CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 46889999965 79999999874321 12479999999999999999999999999999999999999999999999888
Q ss_pred eEEEEEEeCCC
Q psy8436 83 HVEIVICRNPD 93 (306)
Q Consensus 83 ~v~L~v~r~~~ 93 (306)
.|.|+|.|...
T Consensus 104 ~v~l~v~R~g~ 114 (117)
T 2fne_A 104 TVTLMVLSSDE 114 (117)
T ss_dssp SEEEEEEECSC
T ss_pred eEEEEEEeCCc
Confidence 89999998753
No 56
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.69 E-value=1.5e-16 Score=127.81 Aligned_cols=88 Identities=32% Similarity=0.453 Sum_probs=76.5
Q ss_pred cccEEEEEEeCCCCceeEEEEec---CC-CCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQ---DG-GAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg---~~-~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
.++..|.|.|.. .+|||+|.++ .. .....|+||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+
T Consensus 79 ~~~~~v~l~k~~-~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~ 157 (170)
T 3egg_C 79 LELFPVELEKDS-EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLR 157 (170)
T ss_dssp SEEEEEEEECBT-TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHH
T ss_pred ceEEEEEEEeCC-CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 356778899865 6999999993 21 112358999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeC
Q psy8436 79 NKDSHVEIVICRN 91 (306)
Q Consensus 79 ~~~~~v~L~v~r~ 91 (306)
.++..|+|+|.|.
T Consensus 158 ~~g~~v~L~V~R~ 170 (170)
T 3egg_C 158 NTKGRVRFMIGRE 170 (170)
T ss_dssp HCCSEEEEEEEEC
T ss_pred cCCCEEEEEEEeC
Confidence 9999999999884
No 57
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.69 E-value=2.1e-16 Score=115.14 Aligned_cols=88 Identities=16% Similarity=0.241 Sum_probs=75.9
Q ss_pred cccEEEEEEeCCCCceeEEEEe-cC----CCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 3 KQFKVFRVVKDDSNELGIYIER-QD----GGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREAL 77 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~g-g~----~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l 77 (306)
...++|.|.|.+.++|||+|.+ +. ......+++|..|.++|||+++| |++||+|++|||+++.+++++++..+|
T Consensus 3 ~~~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 3 QQRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp CCEEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CccEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4568999999888899999997 11 11112479999999999999999 999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeC
Q psy8436 78 NNKDSHVEIVICRN 91 (306)
Q Consensus 78 ~~~~~~v~L~v~r~ 91 (306)
+..++.+.|+|.+.
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 99988999999763
No 58
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.69 E-value=6.6e-17 Score=122.33 Aligned_cols=91 Identities=26% Similarity=0.430 Sum_probs=81.1
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCC-CCCHHHHHHHHhcC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLK-GLTIQEAREALNNK 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~-~~~~~~a~~~l~~~ 80 (306)
.++++|.|.|.++.+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++. ++++++++.+++.+
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~ 98 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQKA 98 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcC
Confidence 468999999988889999999885321 2358999999999999999999999999999999998 99999999999999
Q ss_pred CCeEEEEEEeCCC
Q psy8436 81 DSHVEIVICRNPD 93 (306)
Q Consensus 81 ~~~v~L~v~r~~~ 93 (306)
+..|.|+|.|...
T Consensus 99 ~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 99 KDTVQLVIARGSL 111 (117)
T ss_dssp CSEEEEEEESSCC
T ss_pred CCEEEEEEEeCCc
Confidence 9999999999754
No 59
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=114.90 Aligned_cols=85 Identities=26% Similarity=0.401 Sum_probs=75.5
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC-
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS- 82 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~- 82 (306)
+.++|.|.|.. .+|||++.++.... .+++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.++.
T Consensus 2 ~~~~v~l~~~~-~g~G~~~~~g~~~~--~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2q9v_A 2 MEQDIFLWRKE-TGFGFRILGGNEPG--EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQ 78 (90)
T ss_dssp EEEEEEEECBT-TBCCEEEEECSSTT--SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred CcEEEEEEECC-CccCEEEEccccCC--CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 46789999965 69999999885433 579999999999999999999999999999999999999999999998743
Q ss_pred -eEEEEEEeC
Q psy8436 83 -HVEIVICRN 91 (306)
Q Consensus 83 -~v~L~v~r~ 91 (306)
.|.|+|.|.
T Consensus 79 ~~v~l~v~R~ 88 (90)
T 2q9v_A 79 GHVNLTVRQT 88 (90)
T ss_dssp TEEEEEEEEC
T ss_pred CeEEEEEEec
Confidence 899999885
No 60
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.69 E-value=2.8e-16 Score=116.69 Aligned_cols=90 Identities=24% Similarity=0.413 Sum_probs=77.5
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCC-CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGG-AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~-~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
.+..+|.| | ...+|||+|.++... ....|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.++
T Consensus 10 ~~~~~v~l-~-~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g 87 (106)
T 3axa_A 10 PEIITVTL-K-KQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTS 87 (106)
T ss_dssp CCEEEEEE-E-CSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC
T ss_pred ceEEEEEE-C-CCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 45667777 5 567999999987432 22358999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEeCCCC
Q psy8436 82 SHVEIVICRNPDD 94 (306)
Q Consensus 82 ~~v~L~v~r~~~~ 94 (306)
..|.|+|.|....
T Consensus 88 ~~v~l~v~R~~~~ 100 (106)
T 3axa_A 88 SVVTLEVAKQGAI 100 (106)
T ss_dssp SEEEEEEECCCSS
T ss_pred CeEEEEEEeCCcc
Confidence 9999999997654
No 61
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.69 E-value=2.1e-16 Score=118.55 Aligned_cols=87 Identities=17% Similarity=0.357 Sum_probs=77.6
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
.+.+.|.|.|.. .+|||+|.++.... .|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.++.
T Consensus 23 ~~~~~v~l~~~~-~glG~~l~~~~~~~--~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~ 99 (112)
T 2r4h_A 23 MDFYTVELERGA-KGFGFSLRGGREYN--MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGR 99 (112)
T ss_dssp CCEEEEEEECBT-TBTSEEEEECGGGT--CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CceEEEEEEcCC-CccCEEEeccccCC--CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 467899999854 68999999875422 589999999999999999999999999999999999999999999999888
Q ss_pred eEEEEEEeCC
Q psy8436 83 HVEIVICRNP 92 (306)
Q Consensus 83 ~v~L~v~r~~ 92 (306)
.|.|+|.|..
T Consensus 100 ~v~l~v~R~~ 109 (112)
T 2r4h_A 100 RVRLFLKRGE 109 (112)
T ss_dssp EEEEEEECCE
T ss_pred eEEEEEEeCC
Confidence 9999998864
No 62
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.69 E-value=4.4e-16 Score=112.32 Aligned_cols=84 Identities=20% Similarity=0.328 Sum_probs=73.9
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
+.|+|.|.|.. .+|||++.++... .|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++.+++.
T Consensus 3 ~~r~v~l~r~~-~g~G~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 77 (91)
T 1g9o_A 3 LPRLCCLEKGP-NGYGFHLHGEKGK---LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAALNA 77 (91)
T ss_dssp CCEEEEEECBT-TBCCEEEEECTTC---SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred ccEEEEEEeCC-CcccEEEEecCCC---CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 46889999965 5999999987653 589999999999999999 999999999999999999999999999998777
Q ss_pred EEEEEEeCC
Q psy8436 84 VEIVICRNP 92 (306)
Q Consensus 84 v~L~v~r~~ 92 (306)
+.+++.+..
T Consensus 78 ~~~~~~~r~ 86 (91)
T 1g9o_A 78 VRLLVVDPE 86 (91)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEcCC
Confidence 766666543
No 63
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.69 E-value=1.2e-16 Score=147.90 Aligned_cols=59 Identities=20% Similarity=0.442 Sum_probs=51.5
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+.+ +.+...++.. .++.|.|+|.|+..
T Consensus 282 ~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~~v~~--~~~l~~~l~~~~~g~~v~l~V~R~g~ 342 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAG-LKAGDIITQINDTKITQ--ATQVKTTISLLRVGSTVKIIVERDNK 342 (451)
T ss_dssp CCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred ceEEEEecCCCChHHHcC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEEEEEECCE
Confidence 589999999999999999 99999999999999995 5667677664 47899999999753
No 64
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.69 E-value=7.1e-17 Score=119.29 Aligned_cols=89 Identities=24% Similarity=0.335 Sum_probs=78.3
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK- 80 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~- 80 (306)
+.+.+.|.|.| ...+|||+|.++.... .+++|..|.++|||+++|+|++||+|++|||+++.++++++++.+|+.+
T Consensus 7 ~~~~~~v~l~~-~~~g~G~~i~~g~~~~--~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~ 83 (103)
T 1uep_A 7 GYKELDVHLRR-MESGFGFRILGGDEPG--QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAA 83 (103)
T ss_dssp SEEEECCEEES-SSSSCCEEECCCCSTT--SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred CceEEEEEEEe-CCCccCEEEeeecCCC--CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34567888999 5679999999875432 6799999999999999999999999999999999999999999999987
Q ss_pred -CCeEEEEEEeCCC
Q psy8436 81 -DSHVEIVICRNPD 93 (306)
Q Consensus 81 -~~~v~L~v~r~~~ 93 (306)
+..|.|+|.|...
T Consensus 84 ~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 84 RNGQVNLTVRRKVL 97 (103)
T ss_dssp HHTEEEEEEEEECC
T ss_pred CCCcEEEEEEeCCC
Confidence 6899999998753
No 65
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.69 E-value=2.3e-16 Score=117.12 Aligned_cols=84 Identities=31% Similarity=0.489 Sum_probs=71.9
Q ss_pred EEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEE
Q psy8436 10 VVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEI 86 (306)
Q Consensus 10 l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L 86 (306)
+..+...+|||+|.||.... ...|++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++.++..|.|
T Consensus 7 ~~~~~~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l 86 (106)
T 4amh_A 7 LVPRGSKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYL 86 (106)
T ss_dssp -----CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEE
T ss_pred cCCCCCCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEE
Confidence 34457789999999996543 124899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCC
Q psy8436 87 VICRNPD 93 (306)
Q Consensus 87 ~v~r~~~ 93 (306)
+|.|...
T Consensus 87 ~v~R~~~ 93 (106)
T 4amh_A 87 KVAKPGS 93 (106)
T ss_dssp EEECCSS
T ss_pred EEEeCCC
Confidence 9999754
No 66
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.69 E-value=2e-16 Score=121.97 Aligned_cols=89 Identities=20% Similarity=0.288 Sum_probs=76.1
Q ss_pred ccEEEEEEeC---------CCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHH
Q psy8436 4 QFKVFRVVKD---------DSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEA 73 (306)
Q Consensus 4 ~~~~v~l~r~---------~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a 73 (306)
.+..+.|.|. .+.+|||+|.++.... ...|+||..|.++|||+++|+|++||+|++|||+++.+++|+++
T Consensus 27 ~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~ 106 (131)
T 1wfg_A 27 LIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEV 106 (131)
T ss_dssp EEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHH
T ss_pred eeeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 4456666665 6889999999874332 12489999999999999999999999999999999999999999
Q ss_pred HHHHhcCC--CeEEEEEEeCC
Q psy8436 74 REALNNKD--SHVEIVICRNP 92 (306)
Q Consensus 74 ~~~l~~~~--~~v~L~v~r~~ 92 (306)
+.+|+.+. ..|.|+|.|..
T Consensus 107 ~~~l~~~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 107 YNIILESKPEPQVELVVSRSG 127 (131)
T ss_dssp HHHHHHTSSSSEEEEEEEEEC
T ss_pred HHHHHhcCCCCEEEEEEEcCC
Confidence 99999874 78999999864
No 67
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.69 E-value=1.8e-16 Score=111.21 Aligned_cols=73 Identities=21% Similarity=0.274 Sum_probs=63.3
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.++.|+|.|.+. ++|||++.++ +|..|.+++||+++| |++||+|++|||+++.+++|+|++++|| ..
T Consensus 4 ~~r~v~l~k~~~-g~~Gf~i~~g----------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~evv~llr-~~ 70 (82)
T 1r6j_A 4 DPRTITMHKDST-GHVGFIFKNG----------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDSQIADILS-TS 70 (82)
T ss_dssp CCEEEEEECCTT-SCCCEEEETT----------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHH-HS
T ss_pred ceEEEEEEECCC-CCeEEEEECC----------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHh-cC
Confidence 467899999863 6799999753 378999999999999 9999999999999999999999999999 45
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
...++|
T Consensus 71 g~~V~L 76 (82)
T 1r6j_A 71 GTVVTI 76 (82)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 555554
No 68
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.69 E-value=2.1e-16 Score=117.13 Aligned_cols=91 Identities=22% Similarity=0.368 Sum_probs=79.0
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCC----cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGA----HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREAL 77 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~----~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l 77 (306)
+.+..+|.|.|. ..+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|
T Consensus 5 ~~~~~~v~l~~~-~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 83 (105)
T 1wha_A 5 SSGRHVACLARS-ERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLL 83 (105)
T ss_dssp CCEEEEEEECCC-TTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CCeeEEEEEEeC-CCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 346678888885 568999999885421 125899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCC
Q psy8436 78 NNKDSHVEIVICRNPD 93 (306)
Q Consensus 78 ~~~~~~v~L~v~r~~~ 93 (306)
+.++..|.|+|.|...
T Consensus 84 ~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 84 TAASPTIALLLEREAG 99 (105)
T ss_dssp TSCCSCEEEEEEECCC
T ss_pred HcCCCeEEEEEEECCC
Confidence 9988899999999754
No 69
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.68 E-value=2.2e-16 Score=119.36 Aligned_cols=85 Identities=29% Similarity=0.537 Sum_probs=74.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.|... .+|||+|.++.+......|+||..|.++|+|+++|+|++||+|++|||+++.++++++++.+|++.
T Consensus 23 ~~~~~v~l~k~~~-~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~ 101 (118)
T 3b76_A 23 MHEKVVNIQKDPG-ESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT 101 (118)
T ss_dssp EEEEEEEEECCTT-CCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC
T ss_pred CCcEEEEEEeCCC-CccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 5567899988863 789999999987655567999999999999999999999999999999999999999999999987
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
. ..+.|
T Consensus 102 ~-~~v~L 107 (118)
T 3b76_A 102 S-SSIVL 107 (118)
T ss_dssp C-SEEEE
T ss_pred C-CeEEE
Confidence 4 44444
No 70
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.68 E-value=5.7e-16 Score=115.19 Aligned_cols=92 Identities=17% Similarity=0.207 Sum_probs=80.7
Q ss_pred CccccEEEEEEeCCCCceeEEEEecCCCC----cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 1 MEKQFKVFRVVKDDSNELGIYIERQDGGA----HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREA 76 (306)
Q Consensus 1 ~~~~~~~v~l~r~~~~~lG~~i~gg~~~~----~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~ 76 (306)
|+.+.++|.|.|.++.+|||+|.++.... ...|++|..|.++|||+ +| |++||+|++|||+++.++++.++...
T Consensus 4 ~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~ 81 (107)
T 2h2b_A 4 MIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQ 81 (107)
T ss_dssp CCEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ccceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHH
Confidence 46788999999988889999999886532 12589999999999999 87 99999999999999999999999999
Q ss_pred HhcCCCeEEEEEEeCCCC
Q psy8436 77 LNNKDSHVEIVICRNPDD 94 (306)
Q Consensus 77 l~~~~~~v~L~v~r~~~~ 94 (306)
++.++..+.|+|.|....
T Consensus 82 ~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 82 LRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp HHTCCSEEEEEEEEESCC
T ss_pred hhCCCCEEEEEEEECCCC
Confidence 888889999999987543
No 71
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.68 E-value=4.7e-16 Score=110.68 Aligned_cols=81 Identities=22% Similarity=0.361 Sum_probs=71.8
Q ss_pred EEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeE
Q psy8436 7 VFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--DSHV 84 (306)
Q Consensus 7 ~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~~~v 84 (306)
+|.|.|. ..+|||++.++.... .+++|..|.++|||+++|+|+.||+|++|||+++.+++++++..+++.+ +..+
T Consensus 3 ~v~l~k~-~~g~G~~i~~~~~~~--~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v 79 (85)
T 2i04_A 3 HTKLRKS-SRGFGFTVVGGDEPD--EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASV 79 (85)
T ss_dssp EEEEECB-TTBSSEEEEECCSTT--BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEE
T ss_pred EEEEEEC-CCCCCEEEEcccCCC--CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeE
Confidence 5788885 469999999875432 6799999999999999999999999999999999999999999999987 6789
Q ss_pred EEEEEe
Q psy8436 85 EIVICR 90 (306)
Q Consensus 85 ~L~v~r 90 (306)
.|+|.|
T Consensus 80 ~l~v~R 85 (85)
T 2i04_A 80 DLELCR 85 (85)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999865
No 72
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.68 E-value=3.1e-16 Score=119.83 Aligned_cols=91 Identities=29% Similarity=0.510 Sum_probs=80.7
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
..++++|.|.|. ..+|||+|.++.... ..|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.++
T Consensus 23 ~~~~~~v~l~k~-~~glG~~l~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 100 (124)
T 2daz_A 23 PGELHIIELEKD-KNGLGLSLAGNKDRS-RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP 100 (124)
T ss_dssp SSEEEEEEEECC-SSCCCEEEECBSSTT-SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC
T ss_pred CCceEEEEEEeC-CCccCEEEeccCCCC-cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 457889999996 679999999885431 258999999999999999999999999999999999999999999999998
Q ss_pred CeEEEEEEeCCCC
Q psy8436 82 SHVEIVICRNPDD 94 (306)
Q Consensus 82 ~~v~L~v~r~~~~ 94 (306)
..|.|+|.|....
T Consensus 101 ~~v~l~v~R~~~~ 113 (124)
T 2daz_A 101 SKVKLVFIRNEDA 113 (124)
T ss_dssp SEEEEEEEECTTH
T ss_pred CeEEEEEEeCCCc
Confidence 8999999997643
No 73
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.68 E-value=1.8e-16 Score=121.82 Aligned_cols=91 Identities=21% Similarity=0.385 Sum_probs=79.8
Q ss_pred ccccEEEEEEeCC-CCceeEEEEecCCCC-------cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHH
Q psy8436 2 EKQFKVFRVVKDD-SNELGIYIERQDGGA-------HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEA 73 (306)
Q Consensus 2 ~~~~~~v~l~r~~-~~~lG~~i~gg~~~~-------~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a 73 (306)
+..++.|.|.|.. +++|||+|.++.... ...|++|..|.++|||+++|.|++||+|++|||+++.+++|+++
T Consensus 27 ~~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~ 106 (128)
T 1nf3_C 27 PETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQV 106 (128)
T ss_dssp CTTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHH
T ss_pred CCccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 5678999999975 589999999874210 11479999999999999999899999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEeCC
Q psy8436 74 REALNNKDSHVEIVICRNP 92 (306)
Q Consensus 74 ~~~l~~~~~~v~L~v~r~~ 92 (306)
+.+|+.++..|.|+|.|..
T Consensus 107 ~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 107 TDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHHHHTTTSEEEEEECCC
T ss_pred HHHHHcCCCeEEEEEEECC
Confidence 9999998889999999865
No 74
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=3.4e-16 Score=118.88 Aligned_cols=90 Identities=24% Similarity=0.328 Sum_probs=79.3
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN 79 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~ 79 (306)
...+.|.|.|.. .+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++.
T Consensus 16 ~~~~~v~l~r~~-~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~ 94 (120)
T 2eno_A 16 VTEEEINLTRGP-SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN 94 (120)
T ss_dssp EEEEEEEEECCS-SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH
T ss_pred CceEEEEEEECC-CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 357889999965 79999999875431 13689999999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEEeCCC
Q psy8436 80 KDSHVEIVICRNPD 93 (306)
Q Consensus 80 ~~~~v~L~v~r~~~ 93 (306)
++..|.|+|.|...
T Consensus 95 ~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 95 AGYAVSLRVQHRLQ 108 (120)
T ss_dssp HCSEEEEEEEEEEE
T ss_pred CCCeEEEEEEeCCc
Confidence 88899999998753
No 75
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=5e-17 Score=121.78 Aligned_cols=90 Identities=31% Similarity=0.496 Sum_probs=80.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCC-------CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGG-------AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREA 76 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~-------~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~ 76 (306)
.++.|.|.|..+.+|||+|.++... ....|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+
T Consensus 9 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 9 GLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSSCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred ccEEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4678999998888999999988632 123589999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEEEEeCCC
Q psy8436 77 LNNKDSHVEIVICRNPD 93 (306)
Q Consensus 77 l~~~~~~v~L~v~r~~~ 93 (306)
++.++..|.|+|.|...
T Consensus 89 l~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 89 LRSVGDTLTVLVCDGFE 105 (111)
T ss_dssp HSSCSSEEEECCCCCCC
T ss_pred HHcCCCeEEEEEEECCC
Confidence 99998899999988653
No 76
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.68 E-value=4.5e-16 Score=111.24 Aligned_cols=83 Identities=16% Similarity=0.282 Sum_probs=73.6
Q ss_pred EEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEE
Q psy8436 7 VFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEI 86 (306)
Q Consensus 7 ~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L 86 (306)
++.+.+....+|||++.++.... .|++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+..+..+.|
T Consensus 3 ~~~v~~~~~~~lG~~l~~~~~~~--~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 79 (87)
T 2pa1_A 3 ALTVDVAGPAPWGFRITGGRDFH--TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRL 79 (87)
T ss_dssp EEEEEECSSSCCSEEEEEEGGGT--EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEE
T ss_pred EEEEEECCCCccCEEEecccCCC--CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 45566667789999999885432 579999999999999999 999999999999999999999999999998888999
Q ss_pred EEEeCC
Q psy8436 87 VICRNP 92 (306)
Q Consensus 87 ~v~r~~ 92 (306)
+|.|..
T Consensus 80 ~v~R~~ 85 (87)
T 2pa1_A 80 QLDRIT 85 (87)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 999975
No 77
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=5.9e-16 Score=115.72 Aligned_cols=90 Identities=18% Similarity=0.294 Sum_probs=79.7
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
.+.++|.|.|.. .+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..+
T Consensus 7 ~~~~~v~l~~~~-~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 85 (110)
T 1um1_A 7 GYVFTVELERGP-SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGG 85 (110)
T ss_dssp CCEEEEEEECCT-TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCC
T ss_pred CcEEEEEEEECC-CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 467889999965 69999999975432 2368999999999999999999999999999999999999999999999998
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
..+.|+|.|...
T Consensus 86 ~~v~l~v~R~~~ 97 (110)
T 1um1_A 86 KKMRFLVAKSDV 97 (110)
T ss_dssp SEEEEEEECCCH
T ss_pred CeEEEEEEeCCc
Confidence 899999998753
No 78
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.68 E-value=2.7e-16 Score=112.97 Aligned_cols=81 Identities=20% Similarity=0.315 Sum_probs=70.9
Q ss_pred EEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEE
Q psy8436 7 VFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEI 86 (306)
Q Consensus 7 ~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L 86 (306)
+|.+. ...+|||+|.++.... .+++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++.++..+.|
T Consensus 6 ~v~~~--~~~~~G~~l~gg~~~~--~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l 80 (89)
T 2q3g_A 6 KVVLE--GPAPWGFRLQGGKDFN--VPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSL 80 (89)
T ss_dssp EEEEE--SSSCCCEEEEEEGGGT--EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEE
T ss_pred EEEEc--CCCcccEEEECcCCCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEE
Confidence 34444 4579999999875432 579999999999999999 999999999999999999999999999988889999
Q ss_pred EEEeCC
Q psy8436 87 VICRNP 92 (306)
Q Consensus 87 ~v~r~~ 92 (306)
+|.|..
T Consensus 81 ~v~R~~ 86 (89)
T 2q3g_A 81 GLSRAI 86 (89)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 998864
No 79
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.67 E-value=9.1e-17 Score=121.92 Aligned_cols=90 Identities=14% Similarity=0.300 Sum_probs=78.8
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhccc-CCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRD-GRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~-G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
+.+.++|.|.|...++|||+|.++.... .+++|..|.++|||+++ |.|++||+|++|||+++.+++|.+++.+++.+
T Consensus 13 ~~~~~~v~l~k~~~~~~G~~l~gg~~~~--~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 13 HDNLVLIRMKPDENGRFGFNVKGGYDQK--MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKAS 90 (119)
T ss_dssp SSCCEEEEECCCSSSCCSEEEEEEGGGT--EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHH
T ss_pred CCCeEEEEEEeCCCCCcCEEEecccCCC--CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 4578999999988778999999885432 57999999999999999 33999999999999999999999999999988
Q ss_pred C----CeEEEEEEeCCC
Q psy8436 81 D----SHVEIVICRNPD 93 (306)
Q Consensus 81 ~----~~v~L~v~r~~~ 93 (306)
+ ..|.|+|.|...
T Consensus 91 ~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 91 CERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHCCSSCEEEEEECCCC
T ss_pred cccCCCEEEEEEEcccc
Confidence 4 489999998743
No 80
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.67 E-value=8.1e-16 Score=118.28 Aligned_cols=90 Identities=21% Similarity=0.322 Sum_probs=78.7
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK- 80 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~- 80 (306)
+.+..+|.|.| ...+|||++.++.... .+++|..|.++|||+++|+|+.||+|++|||+++.+++|++++.+|+.+
T Consensus 16 ~g~~~~v~l~~-~~~g~G~~i~g~~~~~--~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~ 92 (129)
T 2kpk_A 16 KGKFIHTKLRK-SSRGFGFTVVGGDEPD--EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIP 92 (129)
T ss_dssp CSEEEEEEEEE-CSSCCSEEEEEEEETT--EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSC
T ss_pred CCcEEEEEEEE-CCCcccEEEeCccCCC--CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 44567889999 4569999999875432 5799999999999999999999999999999999999999999999988
Q ss_pred -CCeEEEEEEeCCCC
Q psy8436 81 -DSHVEIVICRNPDD 94 (306)
Q Consensus 81 -~~~v~L~v~r~~~~ 94 (306)
+..|.|+|.|....
T Consensus 93 ~g~~v~l~v~R~~~~ 107 (129)
T 2kpk_A 93 IGASVDLELCRGYPL 107 (129)
T ss_dssp TTEEEEEEEEECSCC
T ss_pred CCCeEEEEEEeCCCC
Confidence 67899999997643
No 81
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.67 E-value=4.1e-16 Score=113.59 Aligned_cols=87 Identities=20% Similarity=0.294 Sum_probs=77.5
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
|.+..++.|.+....+|||++.+.. .|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.++
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~~-----~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~ 80 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSPNE-----IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGAN 80 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEECS-----SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred HCceEEEEEEeCCCCCccEEEEeCC-----CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 3456788898878889999998722 57999999999999999999999999999999999999999999999998
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
+.|.|+|.|...
T Consensus 81 ~~v~l~v~R~~p 92 (96)
T 2qkv_A 81 GKVSMEVTRPKP 92 (96)
T ss_dssp SEEEEEEECCCC
T ss_pred CcEEEEEEeCCc
Confidence 899999998643
No 82
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.67 E-value=5.1e-16 Score=115.89 Aligned_cols=89 Identities=17% Similarity=0.291 Sum_probs=78.1
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCC----------cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHH
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGA----------HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEA 73 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~----------~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a 73 (306)
+.+.|.|.|....+|||+|.++.... ...|++|..|.++|||+++| |+.||+|++|||+++.+++|.++
T Consensus 7 ~~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~ 85 (109)
T 1q3o_A 7 KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQV 85 (109)
T ss_dssp EEEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred CcEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 56789999888889999999886531 01279999999999999999 99999999999999999999999
Q ss_pred HHHHhcCCCeEEEEEEeCCC
Q psy8436 74 REALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 74 ~~~l~~~~~~v~L~v~r~~~ 93 (306)
..+++.++..+.|+|.|...
T Consensus 86 ~~~l~~~~~~v~l~v~~~~~ 105 (109)
T 1q3o_A 86 VNMIRQGGNTLMVKVVMVTR 105 (109)
T ss_dssp HHHHHHTTTEEEEEEEEEEC
T ss_pred HHHHHhCCCEEEEEEEECCC
Confidence 99999888899999988643
No 83
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.67 E-value=4.3e-16 Score=113.76 Aligned_cols=89 Identities=26% Similarity=0.411 Sum_probs=77.2
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCC--cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGA--HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~--~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+..+|.|.| ...+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+.++
T Consensus 3 ~~~~v~l~k-~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 81 (97)
T 2jil_A 3 RTVEVTLHK-EGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG 81 (97)
T ss_dssp EEEEEEEEC-BTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred eEEEEEEEe-CCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 456788888 4679999999885321 1258999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
..+.|+|.|+..
T Consensus 82 ~~v~l~v~R~~~ 93 (97)
T 2jil_A 82 QEAALLIEYDVS 93 (97)
T ss_dssp SEEEEEEEEECC
T ss_pred CeEEEEEEeCCC
Confidence 899999999754
No 84
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.67 E-value=2.2e-16 Score=119.37 Aligned_cols=89 Identities=20% Similarity=0.279 Sum_probs=77.9
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCc----CCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAH----FSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~----~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
.+.++|.|.|..+.+|||+|.++..... ..|++|..|.++|||+ +| |++||+|++|||+++.+++|.+++.+++
T Consensus 13 ~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l~ 90 (117)
T 2csj_A 13 WEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQLR 90 (117)
T ss_dssp EEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 4567899999877899999999865321 3589999999999996 66 9999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCC
Q psy8436 79 NKDSHVEIVICRNPD 93 (306)
Q Consensus 79 ~~~~~v~L~v~r~~~ 93 (306)
.++..|.|+|.|...
T Consensus 91 ~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 91 KSGKIAAIVVKRPRK 105 (117)
T ss_dssp HSCSEEEEEEEEEEE
T ss_pred cCCCeEEEEEEECCc
Confidence 999999999998643
No 85
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.67 E-value=3.2e-16 Score=116.22 Aligned_cols=85 Identities=20% Similarity=0.306 Sum_probs=76.8
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
+..+|.|.|..+.+|||++.+.. .|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++..++.
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~~~-----~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~ 76 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSPNE-----IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGK 76 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEECS-----SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSC
T ss_pred eEEEEEEEeCCCCccCEEEEeCC-----CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCe
Confidence 35678898888899999998722 5799999999999999999999999999999999999999999999999889
Q ss_pred EEEEEEeCCC
Q psy8436 84 VEIVICRNPD 93 (306)
Q Consensus 84 v~L~v~r~~~ 93 (306)
|.|+|.|...
T Consensus 77 v~l~v~R~~~ 86 (106)
T 2la8_A 77 VSMEVTRPKP 86 (106)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEeCCC
Confidence 9999999754
No 86
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.67 E-value=1e-16 Score=122.94 Aligned_cols=89 Identities=28% Similarity=0.399 Sum_probs=75.5
Q ss_pred cEEEEEEeCCCCceeEEEEecCCC--CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGG--AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-- 80 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~--~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-- 80 (306)
...|.|.|....+|||+|.++... ....++||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+.+
T Consensus 26 ~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 26 TLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp EEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred EEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 344555556788999999988532 1124799999999999999999999999999999999999999999999976
Q ss_pred -----CCeEEEEEEeCCC
Q psy8436 81 -----DSHVEIVICRNPD 93 (306)
Q Consensus 81 -----~~~v~L~v~r~~~ 93 (306)
+..|+|+|.|...
T Consensus 106 ~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 106 MEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHTCEEEEEEEECSC
T ss_pred cccCCCCEEEEEEEeCCC
Confidence 7899999999754
No 87
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.67 E-value=8.7e-16 Score=112.31 Aligned_cols=89 Identities=24% Similarity=0.374 Sum_probs=78.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
+.++|.|.|. ..+|||++.++.+.. ..|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.++..
T Consensus 4 ~~~~v~l~~~-~~~lG~~l~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 81 (98)
T 2opg_A 4 CETTIEISKG-RTGLGLSIVGGSDTL-LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQR 81 (98)
T ss_dssp EEEEEEEECB-TTBTCEEEEECTTST-TCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSE
T ss_pred CEEEEEEEEC-CCcccEEEecCCCCC-CCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4578999995 569999999875421 14799999999999999999999999999999999999999999999998889
Q ss_pred EEEEEEeCCCC
Q psy8436 84 VEIVICRNPDD 94 (306)
Q Consensus 84 v~L~v~r~~~~ 94 (306)
|.|+|.|....
T Consensus 82 v~l~v~R~~~~ 92 (98)
T 2opg_A 82 VRLTLYRDEAP 92 (98)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEEcCCCC
Confidence 99999987643
No 88
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.67 E-value=5.9e-16 Score=112.79 Aligned_cols=89 Identities=18% Similarity=0.375 Sum_probs=77.3
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..|+|.|.|.. .+|||++.+........|++|..|.++|||+++| |+.||+|++|||+++.+++++++..+++..+..
T Consensus 3 ~~r~v~l~k~~-~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 80 (96)
T 2v90_A 3 KPRCLHLEKGP-QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQGSC 80 (96)
T ss_dssp CCEEEEEECBT-TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CCEEEEEEeCC-CcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 46899999965 5999999885432222589999999999999999 999999999999999999999999999998889
Q ss_pred EEEEEEeCCCC
Q psy8436 84 VEIVICRNPDD 94 (306)
Q Consensus 84 v~L~v~r~~~~ 94 (306)
+.|+|.|....
T Consensus 81 v~l~v~r~~~~ 91 (96)
T 2v90_A 81 VSLTVVDPEAD 91 (96)
T ss_dssp EEEEEECCCTT
T ss_pred EEEEEECCCCc
Confidence 99999997643
No 89
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.67 E-value=5e-16 Score=117.82 Aligned_cols=91 Identities=20% Similarity=0.330 Sum_probs=78.3
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
..++.|.|.|....+|||+|.++... ...|++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+++.++.
T Consensus 14 ~~~~~v~l~~~~~~~lG~~i~g~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 92 (119)
T 1x6d_A 14 DGIHVTILHKEEGAGLGFSLAGGADL-ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQARE 92 (119)
T ss_dssp TTEEEEEEECCTTSCCSEEEECCSSS-SCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTS
T ss_pred CCeEEEEEEeCCCCccCEEEeCCCCC-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 46788999998889999999987542 12589999999999999999999999999999999999999999999998865
Q ss_pred e-EEEEEEeCCCC
Q psy8436 83 H-VEIVICRNPDD 94 (306)
Q Consensus 83 ~-v~L~v~r~~~~ 94 (306)
. +.|+|.|....
T Consensus 93 ~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 93 PRQAVIVTRKLTP 105 (119)
T ss_dssp SSEEEEEEECCCS
T ss_pred CeEEEEEEcCCCc
Confidence 4 55778876543
No 90
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=3.8e-16 Score=115.55 Aligned_cols=92 Identities=22% Similarity=0.328 Sum_probs=79.4
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+.+.+.|.|.+.. .+|||+|.++.......+++|..|.+++||+++|+|+.||+|++|||+++.++++.+++.+++.++
T Consensus 9 ~~~~~~v~l~~~~-~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g 87 (104)
T 2djt_A 9 ASGHFSVELVRGY-AGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGG 87 (104)
T ss_dssp CCCCEEEEEECCS-SSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTC
T ss_pred CCceEEEEEEeCC-CCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4567889999965 699999998743211257999999999999999999999999999999999999999999999888
Q ss_pred CeEEEEEEeCCCC
Q psy8436 82 SHVEIVICRNPDD 94 (306)
Q Consensus 82 ~~v~L~v~r~~~~ 94 (306)
..|.|+|.|....
T Consensus 88 ~~v~l~v~R~g~~ 100 (104)
T 2djt_A 88 PQLHLVIRRPLSG 100 (104)
T ss_dssp SEEEEEECCCCCC
T ss_pred CeEEEEEEECCCC
Confidence 8999999887543
No 91
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.67 E-value=8e-16 Score=114.40 Aligned_cols=89 Identities=22% Similarity=0.374 Sum_probs=76.4
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCc----------CCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHH
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAH----------FSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQE 72 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~----------~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~ 72 (306)
...++|.|.|... +|||+|.++..... .+++||..|.++|||+++| |+.||+|++|||+++.+++|.+
T Consensus 5 ~~~r~v~l~k~~~-g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~ 82 (107)
T 3qe1_A 5 GSPRVVRIVKSES-GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHKQ 82 (107)
T ss_dssp -CCEEEEEECBTT-BTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CCcEEEEEEECCC-CCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 3568999999655 99999998843211 2456899999999999999 9999999999999999999999
Q ss_pred HHHHHhcCCCeEEEEEEeCCC
Q psy8436 73 AREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 73 a~~~l~~~~~~v~L~v~r~~~ 93 (306)
+..+|+.++..+.|+|.|...
T Consensus 83 ~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 83 VVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHHcCCCEEEEEEEcCCC
Confidence 999999989999999998653
No 92
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.67 E-value=6.3e-16 Score=111.46 Aligned_cols=83 Identities=16% Similarity=0.367 Sum_probs=73.7
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..|+|.|.|.. .+|||.+.+. .+++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++.++..
T Consensus 3 ~~r~v~l~~~~-~g~G~~l~~~------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 74 (91)
T 2f5y_A 3 RYRQITIPRGK-DGFGFTICCD------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSE 74 (91)
T ss_dssp EEEEEEEECBT-TBTSEEEECS------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred ceEEEEEEeCC-CCccEEEecC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 46899999954 6899999753 469999999999999999 999999999999999999999999999998889
Q ss_pred EEEEEEeCCCC
Q psy8436 84 VEIVICRNPDD 94 (306)
Q Consensus 84 v~L~v~r~~~~ 94 (306)
+.|+|.|....
T Consensus 75 v~l~v~R~~~~ 85 (91)
T 2f5y_A 75 IILLVWRMVPQ 85 (91)
T ss_dssp EEEEEEECC--
T ss_pred EEEEEEeCCCC
Confidence 99999997644
No 93
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.66 E-value=9.1e-16 Score=115.23 Aligned_cols=86 Identities=24% Similarity=0.466 Sum_probs=77.3
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
..+++|.|.|...++|||.+.+.. .+++|..|.++|||+++|.|+.||+|++|||+.+.+++++++..+|+..++
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~~~-----~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 98 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRNEM-----DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHG 98 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEECS-----SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCE
T ss_pred CceEEEEEEeCCCCceeEEEEeCC-----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 468899999988779999998762 479999999999999999339999999999999999999999999998888
Q ss_pred eEEEEEEeCCC
Q psy8436 83 HVEIVICRNPD 93 (306)
Q Consensus 83 ~v~L~v~r~~~ 93 (306)
.|.|+|.|...
T Consensus 99 ~v~l~v~r~~~ 109 (113)
T 1va8_A 99 TLTFVLIPSSG 109 (113)
T ss_dssp EEEEEEECCCC
T ss_pred eEEEEEEECCc
Confidence 89999998653
No 94
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.66 E-value=3.2e-16 Score=117.76 Aligned_cols=92 Identities=30% Similarity=0.402 Sum_probs=79.2
Q ss_pred ccccEEEEEEeCCCCceeEEEEe---cCCC-CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIER---QDGG-AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREAL 77 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~g---g~~~-~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l 77 (306)
+-++..|.|.|. ..+|||+|.+ +... ....|++|..|.++|||+++|+|+.||+|++|||+++.++++.+++.++
T Consensus 2 ~~~~~~v~l~k~-~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (113)
T 2g5m_B 2 HMELFPVELEKD-SEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 80 (113)
T ss_dssp CCEEEEEECCCC-SSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred CeEEEEEEEEeC-CCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 446778888885 5799999998 3221 1235899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCCC
Q psy8436 78 NNKDSHVEIVICRNPDD 94 (306)
Q Consensus 78 ~~~~~~v~L~v~r~~~~ 94 (306)
+.++..|.|+|.|....
T Consensus 81 ~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 81 RNTKGRVRFMIGRERPG 97 (113)
T ss_dssp HHSCSSCEEEEEECCCC
T ss_pred hcCCCeEEEEEEeCCCC
Confidence 99999999999997654
No 95
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.66 E-value=5.1e-16 Score=111.18 Aligned_cols=77 Identities=19% Similarity=0.475 Sum_probs=68.6
Q ss_pred EEEEe-CCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEE
Q psy8436 8 FRVVK-DDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEI 86 (306)
Q Consensus 8 v~l~r-~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L 86 (306)
|.|.+ ...+.|||.+.+ |+||..|.++|||+++|+|+.||+|++|||+++.+++|++++.+|+.+++.|+|
T Consensus 4 v~l~~~~~~~~~G~~~~~--------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L 75 (88)
T 3e17_A 4 VLLMKSRANEEYGLRLGS--------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQL 75 (88)
T ss_dssp EEEECBTTBCCCCEEEEE--------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEE
T ss_pred EEEEeCCCCCCCCEEEeC--------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 44444 566799999974 699999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCC
Q psy8436 87 VICRNP 92 (306)
Q Consensus 87 ~v~r~~ 92 (306)
++.+..
T Consensus 76 ~v~~~~ 81 (88)
T 3e17_A 76 VVLRDL 81 (88)
T ss_dssp EECCC-
T ss_pred EEeCCC
Confidence 998754
No 96
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.66 E-value=7.7e-16 Score=115.27 Aligned_cols=86 Identities=27% Similarity=0.555 Sum_probs=77.1
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..+.|.|.|. +.+|||+|.++.. .|++|..|.++|||+++|+|+.||+|++|||+++.++++.++..+++.++..
T Consensus 15 ~~~~v~l~~~-~~~lG~~l~~~~~----~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 89 (111)
T 2dlu_A 15 HVEEVELIND-GSGLGFGIVGGKT----SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNS 89 (111)
T ss_dssp EEEEEEEECC-SSCCCEEEECCSS----SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSE
T ss_pred ceEEEEEEeC-CCccCEEEeccCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 5688999984 5799999997654 4799999999999999999999999999999999999999999999988889
Q ss_pred EEEEEEeCCCC
Q psy8436 84 VEIVICRNPDD 94 (306)
Q Consensus 84 v~L~v~r~~~~ 94 (306)
|.|+|.|....
T Consensus 90 v~l~v~R~~~~ 100 (111)
T 2dlu_A 90 VRMLVARDPAG 100 (111)
T ss_dssp EEEEEEESCTT
T ss_pred EEEEEEeCCCC
Confidence 99999987544
No 97
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.66 E-value=1.6e-15 Score=116.66 Aligned_cols=93 Identities=23% Similarity=0.373 Sum_probs=80.9
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
+.+.+.|.|.+....+|||++.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~ 92 (129)
T 2dmz_A 13 LFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLR 92 (129)
T ss_dssp CEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHH
T ss_pred CCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3467788897777889999999875422 1358999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCCCC
Q psy8436 79 NKDSHVEIVICRNPDD 94 (306)
Q Consensus 79 ~~~~~v~L~v~r~~~~ 94 (306)
..+..|.|+|.|....
T Consensus 93 ~~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 93 NAGQVVHLTLVRRKTS 108 (129)
T ss_dssp HCCSSEEEEEEEESSS
T ss_pred cCCCeEEEEEEeCCcc
Confidence 9888999999997643
No 98
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.66 E-value=4.5e-16 Score=115.99 Aligned_cols=90 Identities=27% Similarity=0.427 Sum_probs=79.0
Q ss_pred cccEEEEEEeCCCCceeEEEE-----ecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 3 KQFKVFRVVKDDSNELGIYIE-----RQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREA 76 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~-----gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~ 76 (306)
.+.++|.|.|. +.+|||+|. ++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+
T Consensus 8 ~~~~~v~l~k~-~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 8 GDIFEVELAKN-DNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SSEEEEEEESS-SCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CcEEEEEEEEC-CCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 46788999995 579999999 764321 23689999999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEEEEeCCC
Q psy8436 77 LNNKDSHVEIVICRNPD 93 (306)
Q Consensus 77 l~~~~~~v~L~v~r~~~ 93 (306)
++.++..|.|+|.|...
T Consensus 87 ~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 87 LRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHTTSEEEEEEECCCC
T ss_pred HHcCCCeEEEEEEeCCc
Confidence 99999999999998754
No 99
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=2.8e-16 Score=113.26 Aligned_cols=84 Identities=24% Similarity=0.383 Sum_probs=76.0
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
++.+|.|.|.|..+.+|||++.+.. .+++|..|.++|||+++|.|++||+|++|||+++ +.+++++..+|+..+
T Consensus 4 ~~~~r~v~l~k~~~~~lG~~i~~~~-----~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~ 77 (91)
T 2e7k_A 4 GSSGRMVGIRKTAGEHLGVTFRVEG-----GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNAS 77 (91)
T ss_dssp CCCSCBCCBCCCTTCCCCEEEEESS-----SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCC
T ss_pred CCCcEEEEEEECCCCcEeEEEEecC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCC
Confidence 4567889999888899999998732 5799999999999999888999999999999999 889999999999988
Q ss_pred CeEEEEEEeC
Q psy8436 82 SHVEIVICRN 91 (306)
Q Consensus 82 ~~v~L~v~r~ 91 (306)
+.|.|+|.|.
T Consensus 78 ~~v~l~v~~~ 87 (91)
T 2e7k_A 78 GSVILKILSG 87 (91)
T ss_dssp SSBCEEEECC
T ss_pred CeEEEEEEEC
Confidence 8999999875
No 100
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.65 E-value=5.9e-16 Score=114.93 Aligned_cols=84 Identities=15% Similarity=0.302 Sum_probs=77.3
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeE
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHV 84 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v 84 (306)
.|+|.|.|.++.+|||.+..+... .|++|..|.++|||+++| |+.||+|++|||+++.+++|.++..+++.++..|
T Consensus 2 ~r~v~l~~~~~~~~G~~l~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 77 (106)
T 3ngh_A 2 PRESKLSKQEGQNYGFFLRIEKDT---DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSV 77 (106)
T ss_dssp CEEEEEECCTTCCCCCEEECCTTC---CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEE
T ss_pred CEEEEEEeCCCCeeCEEEEEEeCC---CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEE
Confidence 478999999889999999977544 589999999999999999 9999999999999999999999999999889999
Q ss_pred EEEEEeCC
Q psy8436 85 EIVICRNP 92 (306)
Q Consensus 85 ~L~v~r~~ 92 (306)
.|+|.|..
T Consensus 78 ~l~v~r~~ 85 (106)
T 3ngh_A 78 TLLVLDGD 85 (106)
T ss_dssp EEEEECHH
T ss_pred EEEEEECC
Confidence 99999864
No 101
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.65 E-value=9.1e-16 Score=114.29 Aligned_cols=85 Identities=28% Similarity=0.407 Sum_probs=73.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC-CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK-GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~-~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
..++.|.|.|.+ .+|||+|.++.+... ...|+||..|.++|||+++|+|++||+|++|||+++.+++|++++.+|+.
T Consensus 14 ~~~~~v~l~k~~--~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 91 (108)
T 2d92_A 14 PEVKIVELVKDC--KGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKA 91 (108)
T ss_dssp SSCEEEEEEECS--SCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHH
T ss_pred CceEEEEEEECC--CccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 456789999995 689999998765221 23689999999999999999999999999999999999999999999999
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
.+.+.+.|
T Consensus 92 ~~~~~v~l 99 (108)
T 2d92_A 92 VPPGLVHL 99 (108)
T ss_dssp SCSEEEEE
T ss_pred CCCCeEEE
Confidence 87766655
No 102
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.65 E-value=1.7e-16 Score=114.44 Aligned_cols=85 Identities=18% Similarity=0.355 Sum_probs=73.7
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..|+|.|.|... +|||++.+.... .|++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+.++..
T Consensus 3 ~pr~v~l~k~~~-~~G~~l~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 77 (91)
T 2vsp_A 3 KPKLCRLAKGEN-GYGFHLNAIRGL---PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKN 77 (91)
T ss_dssp CEEEEEEECBTT-BTSCCCBCCTTC---SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTSCSE
T ss_pred CcEEEEEEeCCC-cccEEEEeccCC---CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 468999999665 899999876543 579999999999999999 999999999999999999999999999998889
Q ss_pred EEEEEEeCCC
Q psy8436 84 VEIVICRNPD 93 (306)
Q Consensus 84 v~L~v~r~~~ 93 (306)
+.|+|.|...
T Consensus 78 v~l~v~r~~~ 87 (91)
T 2vsp_A 78 VTLLVCGKKA 87 (91)
T ss_dssp EEEEEEC---
T ss_pred EEEEEEeCCc
Confidence 9999998653
No 103
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.65 E-value=1.1e-15 Score=113.85 Aligned_cols=92 Identities=22% Similarity=0.399 Sum_probs=78.6
Q ss_pred ccccEEEEEE-eCCCCceeEEEEecCCCC---cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 2 EKQFKVFRVV-KDDSNELGIYIERQDGGA---HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREAL 77 (306)
Q Consensus 2 ~~~~~~v~l~-r~~~~~lG~~i~gg~~~~---~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l 77 (306)
|.+...|.|. +....+|||++.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.++..++
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3456778886 357789999999874322 235899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCC
Q psy8436 78 NNKDSHVEIVICRNPD 93 (306)
Q Consensus 78 ~~~~~~v~L~v~r~~~ 93 (306)
+..+..|.|+|.|...
T Consensus 90 ~~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 90 RNAGNPVRLLLIRRLP 105 (108)
T ss_dssp HHHCSEEEEEEEECCC
T ss_pred HcCCCeEEEEEEeCCc
Confidence 9888899999998753
No 104
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.65 E-value=8.8e-16 Score=109.96 Aligned_cols=83 Identities=16% Similarity=0.299 Sum_probs=72.3
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeE
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHV 84 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v 84 (306)
...|.| + ...+|||++.++.... .+++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++.++..+
T Consensus 4 ~~~v~l-~-~~~~~G~~l~~g~~~~--~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 78 (88)
T 2uzc_A 4 NYSVSL-V-GPAPWGFRLQGGKDFN--MPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSL 78 (88)
T ss_dssp EEEEEE-E-SSSCCCEEEEEEGGGT--EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEE-c-CCCcccEEEECcCCCC--CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 345666 3 4569999999875432 579999999999999999 9999999999999999999999999999888899
Q ss_pred EEEEEeCC
Q psy8436 85 EIVICRNP 92 (306)
Q Consensus 85 ~L~v~r~~ 92 (306)
.|+|.|..
T Consensus 79 ~l~v~R~g 86 (88)
T 2uzc_A 79 NMTLQRES 86 (88)
T ss_dssp EEEEECCC
T ss_pred EEEEEeCC
Confidence 99998864
No 105
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.65 E-value=7.6e-16 Score=111.94 Aligned_cols=85 Identities=22% Similarity=0.354 Sum_probs=74.5
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
+.|+|.|.|. ..+|||++.++... .+++|..|.++|||+++| |+.||+|++|||+++.+++|+++..+|+.++..
T Consensus 5 ~~r~v~l~~~-~~~~G~~l~~~~~~---~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 79 (95)
T 3r68_A 5 QPRVVVIKKG-SNGYGFYLRAGPEQ---KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQ 79 (95)
T ss_dssp CCEEEEEECB-TTBCSCEEEEC--C---CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CcEEEEEecC-CCcccEEEEecCCC---CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 5688999994 57999999987554 479999999999999999 999999999999999999999999999999889
Q ss_pred EEEEEEeCCC
Q psy8436 84 VEIVICRNPD 93 (306)
Q Consensus 84 v~L~v~r~~~ 93 (306)
+.+++.|...
T Consensus 80 ~~~~~~r~~~ 89 (95)
T 3r68_A 80 TTLLVLDKEL 89 (95)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEECCcc
Confidence 8888887653
No 106
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.65 E-value=1.9e-16 Score=135.40 Aligned_cols=90 Identities=30% Similarity=0.334 Sum_probs=81.0
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
.+.++|.|.|..+++|||+|.|+.... .|+||..|.++|||++++.|++||+|++|||+++.+++|.+++.+|+..++
T Consensus 76 ~~~r~V~L~k~~~~glGf~I~gg~d~~--~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~ 153 (263)
T 1z87_A 76 LQRRRVTVRKADAGGLGISIKGGRENK--MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGK 153 (263)
T ss_dssp CSSEEECCCTTTTCCCCCEEEEETTTT--EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCS
T ss_pred CccEEEEEEeCCCCCEeEEEeeccCCC--CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCC
Confidence 468999999988899999999986543 589999999999999953399999999999999999999999999999999
Q ss_pred eEEEEEEeCCCC
Q psy8436 83 HVEIVICRNPDD 94 (306)
Q Consensus 83 ~v~L~v~r~~~~ 94 (306)
.|.|+|.|....
T Consensus 154 ~V~L~V~R~~~~ 165 (263)
T 1z87_A 154 EVVLEVKYMKEV 165 (263)
T ss_dssp CCCEEEECCSSS
T ss_pred eEEEEEEeCccc
Confidence 999999997654
No 107
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.65 E-value=2.2e-16 Score=119.85 Aligned_cols=85 Identities=39% Similarity=0.669 Sum_probs=69.1
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|.|.|.+. .+|||+|.++.+.+.+..|+||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+..
T Consensus 23 ~~~~~v~l~k~~~-~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~ 101 (120)
T 2iwo_A 23 MGLRTVEMKKGPT-DSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA 101 (120)
T ss_dssp --CEEEEEEC-----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC
T ss_pred CCcEEEEEEcCCC-CCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4568899999863 689999999876544346899999999999999966999999999999999999999999999987
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
... +.|
T Consensus 102 ~~~-v~l 107 (120)
T 2iwo_A 102 SGS-IEM 107 (120)
T ss_dssp CSE-EEE
T ss_pred CCe-EEE
Confidence 543 443
No 108
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.65 E-value=2.1e-15 Score=109.59 Aligned_cols=84 Identities=26% Similarity=0.389 Sum_probs=72.0
Q ss_pred cEEEEEEeCCCCceeEEEEecCCC------CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGG------AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~------~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
..+|.+.+.+ +|||+|.++... ....|++|..|.++|||++ | |++||+|++|||+++.++++.+++.+++
T Consensus 4 ~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (95)
T 1mfg_A 4 EIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLK 79 (95)
T ss_dssp EEEEEEECSS--SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred EEEEEECCCC--CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHhh
Confidence 4567777743 899999997531 1235899999999999999 8 9999999999999999999999999999
Q ss_pred cCCCeEEEEEEeCC
Q psy8436 79 NKDSHVEIVICRNP 92 (306)
Q Consensus 79 ~~~~~v~L~v~r~~ 92 (306)
.++..+.|+|.|..
T Consensus 80 ~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 80 TFQNTVELIIVREV 93 (95)
T ss_dssp HCCSEEEEEEEEEC
T ss_pred cCCCeEEEEEEeCC
Confidence 88899999999864
No 109
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.64 E-value=2.4e-15 Score=113.16 Aligned_cols=91 Identities=16% Similarity=0.239 Sum_probs=78.1
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCc-----CCCeEEEEeCCCChhcc-cCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAH-----FSPYLISHIEPGGAIHR-DGRFHVGDELIKVNDKRLKGLTIQEAREA 76 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~-----~~gi~V~~V~~gs~A~~-~G~L~~GD~Il~VNG~~l~~~~~~~a~~~ 76 (306)
-+.++|.|.|....+|||+|.++..... ..+++|..|.++|||++ +| |++||+|++|||+++.+++|+++..+
T Consensus 9 ~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 9 LQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp CCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred ccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3568899999888899999998743211 12579999999999999 77 99999999999999999999999999
Q ss_pred HhcCCCeEEEEEEeCCCC
Q psy8436 77 LNNKDSHVEIVICRNPDD 94 (306)
Q Consensus 77 l~~~~~~v~L~v~r~~~~ 94 (306)
|+..+..|.|+|.|....
T Consensus 88 l~~~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 88 IKDAGLSVTLRIIPQEEL 105 (114)
T ss_dssp HHHTTTEEEEEECCCSCC
T ss_pred HHcCCCeEEEEEEeCCcC
Confidence 999888999999987543
No 110
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.64 E-value=4.4e-16 Score=115.95 Aligned_cols=85 Identities=29% Similarity=0.574 Sum_probs=72.1
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.++++|.|.|.. ..+|||++.++.+.. ...|+||..|.++|||+++|+|++||+|++|||+++.+++|++++.+|++.
T Consensus 4 ~~~~~v~l~k~~-~~~lG~~i~g~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 81 (108)
T 3cbz_A 4 MNIITVTLNMEK-YNFLGISIVGQSNER-GDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDI 81 (108)
T ss_dssp CCEEEEEECHHH-HCCCCEEEEEECSST-TCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHH
T ss_pred ceEEEEEEEeCC-CCccCEEEEcCcCCC-CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 356789998754 268999999976532 236999999999999999999999999999999999999999999999998
Q ss_pred --CCCceec
Q psy8436 299 --FPQSSKL 305 (306)
Q Consensus 299 --~~~~~~l 305 (306)
+.+.+.|
T Consensus 82 ~~~~~~v~l 90 (108)
T 3cbz_A 82 VHKPGPIVL 90 (108)
T ss_dssp HTSSSCEEE
T ss_pred ccCCCeEEE
Confidence 5555654
No 111
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.64 E-value=1.6e-15 Score=115.01 Aligned_cols=88 Identities=25% Similarity=0.415 Sum_probs=78.9
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
..+.++|.|.|.. .+|||++.++... .|++|..|.++|||+++|+|+.||+|++|||+++.++++.++..+++.++
T Consensus 12 ~~~~~~v~l~k~~-~glG~~l~~~~~~---~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 87 (119)
T 1tp5_A 12 PREPRRIVIHRGS-TGLGFNIVGGEDG---EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAG 87 (119)
T ss_dssp CCSCEEEEEECTT-SCCCEEEEECGGG---CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSC
T ss_pred CCccEEEEEEECC-CCccEEEecCCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 4578999999954 6899999987543 58999999999999999999999999999999999999999999999988
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
..+.|+|.|...
T Consensus 88 ~~v~l~v~r~~~ 99 (119)
T 1tp5_A 88 QTVTIIAQYKPE 99 (119)
T ss_dssp SEEEEEEEECHH
T ss_pred CeEEEEEEECCc
Confidence 999999998653
No 112
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.64 E-value=9.5e-16 Score=109.76 Aligned_cols=78 Identities=26% Similarity=0.359 Sum_probs=67.7
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
.+.|.|.|.++ .+|||++.+..+ .+++|..|.++|||+++++|++||+|++|||+++.+++|++++++|++.++
T Consensus 2 ~r~V~l~K~~~-~~lG~~i~~~~~-----~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 75 (88)
T 1kwa_A 2 SRLVQFQKNTD-EPMGITLKMNEL-----NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG 75 (88)
T ss_dssp CEEEEEEECSS-SCCCEEEECSCG-----GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE
T ss_pred eEEEEEEeCCC-CceeEEEEeCCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC
Confidence 46799999974 789999987432 489999999999999965699999999999999999999999999999876
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
.+.|
T Consensus 76 -~v~l 79 (88)
T 1kwa_A 76 -SITF 79 (88)
T ss_dssp -EEEE
T ss_pred -cEEE
Confidence 5544
No 113
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.64 E-value=2.4e-15 Score=109.47 Aligned_cols=84 Identities=33% Similarity=0.618 Sum_probs=73.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.++|.|.|.. .+|||++.++.+......|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 4 g~~~~v~l~k~~--~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~- 80 (96)
T 1d5g_A 4 GDIFEVELAKND--NSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN- 80 (96)
T ss_dssp TCEEEEEEECSS--SSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS-
T ss_pred CCEEEEEEEeCC--CCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 567889999884 78999999988765545699999999999999998899999999999999999999999999987
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
.+..+.|
T Consensus 81 ~g~~v~l 87 (96)
T 1d5g_A 81 TGQVVHL 87 (96)
T ss_dssp CCSEEEE
T ss_pred CCCeEEE
Confidence 4455443
No 114
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=1.6e-15 Score=111.38 Aligned_cols=88 Identities=24% Similarity=0.385 Sum_probs=78.0
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
..+++|.|.|.....|||++.+..... .|++|..|.++|||+++| |++||+|++|||+++.++++.+++..++. +.
T Consensus 9 ~~~~~v~l~~~~~~~lG~~~~~~~~~~--~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~ 84 (100)
T 2eeh_A 9 DIIHSVRVEKSPAGRLGFSVRGGSEHG--LGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS-SS 84 (100)
T ss_dssp CEECCEEECCCSSSSCSEEEECCTTTT--CCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-CS
T ss_pred CeEEEEEEEECCCCCccEEEEccccCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-CC
Confidence 467889999988778999999875422 589999999999999999 99999999999999999999999999988 68
Q ss_pred eEEEEEEeCCCC
Q psy8436 83 HVEIVICRNPDD 94 (306)
Q Consensus 83 ~v~L~v~r~~~~ 94 (306)
.+.|+|.|....
T Consensus 85 ~v~l~v~R~g~~ 96 (100)
T 2eeh_A 85 RLHMMVRRMGSG 96 (100)
T ss_dssp SEEEEEEECSCC
T ss_pred EEEEEEEECCcC
Confidence 999999997643
No 115
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.64 E-value=1.4e-15 Score=115.06 Aligned_cols=89 Identities=26% Similarity=0.470 Sum_probs=75.1
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-- 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-- 80 (306)
..++.+.+.+. .+|||+|.++.... ...++|..|.++|||+++|.|++||+|++|||+++.+++|++++.+|+..
T Consensus 17 ~~~~~~~~~~~--~glG~~i~gg~~~~-~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 93 (118)
T 1v6b_A 17 KDVRLLRIKKE--GSLDLALEGGVDSP-VGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWN 93 (118)
T ss_dssp CCEEEEEEESC--SCCCCEEEEBTTSS-SCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHH
T ss_pred ceEEEEEECCC--CccCEEEEcccCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhh
Confidence 45778888874 48999999885432 13499999999999999955999999999999999999999999999875
Q ss_pred --CCeEEEEEEeCCCC
Q psy8436 81 --DSHVEIVICRNPDD 94 (306)
Q Consensus 81 --~~~v~L~v~r~~~~ 94 (306)
+..|+|+|.|....
T Consensus 94 ~~g~~v~l~v~r~~~~ 109 (118)
T 1v6b_A 94 QGGDWIDLVVAVCPPK 109 (118)
T ss_dssp HTCSEEEEEEECCCSC
T ss_pred cCCCeEEEEEEeCCcc
Confidence 77999999996543
No 116
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.64 E-value=1.2e-15 Score=112.51 Aligned_cols=86 Identities=21% Similarity=0.350 Sum_probs=76.7
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
...|+|.|.|. ..+|||++.++... .|++|..|.++|||+++| |+.||+|++|||+++.+++++++..+++..+.
T Consensus 5 ~~~r~v~l~k~-~~g~G~~l~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~ 79 (102)
T 2d90_A 5 SSGRVVVIKKG-SNGYGFYLRAGPEQ---KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGGD 79 (102)
T ss_dssp SSSEEEEEECC-SSSSSCEEEECSSS---SSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHSTT
T ss_pred CCCEEEEEeeC-CCCccEEEEeecCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 45789999995 45999999986443 589999999999999999 99999999999999999999999999998888
Q ss_pred eEEEEEEeCCC
Q psy8436 83 HVEIVICRNPD 93 (306)
Q Consensus 83 ~v~L~v~r~~~ 93 (306)
.+.|+|.|...
T Consensus 80 ~v~l~v~r~~~ 90 (102)
T 2d90_A 80 QTTLLVLDKEA 90 (102)
T ss_dssp EEEEEECSTTC
T ss_pred EEEEEEEECCC
Confidence 99999987654
No 117
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.64 E-value=1.2e-15 Score=108.57 Aligned_cols=82 Identities=15% Similarity=0.273 Sum_probs=71.2
Q ss_pred EEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEE
Q psy8436 6 KVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVE 85 (306)
Q Consensus 6 ~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~ 85 (306)
..|.|.+ ..+|||++.++.... .+++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++.++..+.
T Consensus 3 ~~v~l~~--~~~~G~~l~gg~~~~--~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~ 77 (85)
T 1rgw_A 3 YSVTLTG--PGPWGFRLQGGKDFN--MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLS 77 (85)
T ss_dssp EEEEECC--SSCCCEEECCCGGGT--SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEE
T ss_pred EEEEEeC--CCccCEEEEeccCCC--CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEE
Confidence 4566643 468999999875432 579999999999999999 99999999999999999999999999998888899
Q ss_pred EEEEeCC
Q psy8436 86 IVICRNP 92 (306)
Q Consensus 86 L~v~r~~ 92 (306)
|+|.|..
T Consensus 78 l~v~R~~ 84 (85)
T 1rgw_A 78 LTLQKSK 84 (85)
T ss_dssp EEEESCC
T ss_pred EEEEeCC
Confidence 9998853
No 118
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.64 E-value=2.6e-15 Score=111.51 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=71.1
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-- 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-- 80 (306)
-++++|.|.|. ..+|||+|.++. .|.+|+.|.+ +|+.+| |++||+|++|||+++.+++|++++.+|+.+
T Consensus 11 ~~~~~V~L~Kg-~~G~GFsI~~~~-----~g~~V~~I~~--~~~~aG-L~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~ 81 (113)
T 3soe_A 11 GLLVTIPLIKG-PKGFGFAIADSP-----TGQKVKMILD--SQWCQG-LQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPV 81 (113)
T ss_dssp CEEEEEEEECB-TTBSSEEEEEET-----TEEEEEEESC--GGGSTT-CCTTCEEEEETTEECTTSCHHHHHHHHHHSCT
T ss_pred CCEEEEEEEEC-CCcccEEEeCCC-----CCcEEEEecC--hHHhCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 36789999996 569999997653 3578999998 466666 999999999999999999999999999987
Q ss_pred CCeEEEEEEeCCCC
Q psy8436 81 DSHVEIVICRNPDD 94 (306)
Q Consensus 81 ~~~v~L~v~r~~~~ 94 (306)
+..|+|+|.|....
T Consensus 82 G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 82 GADVPLLILRGGPP 95 (113)
T ss_dssp TCEEEEEEEESSCC
T ss_pred CCEEEEEEEECCcc
Confidence 66899999997643
No 119
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.63 E-value=3.1e-15 Score=112.41 Aligned_cols=87 Identities=23% Similarity=0.228 Sum_probs=76.9
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
...++|.|.|...++|||++.++.... .+++|..|.++|||+++|+|+.||+|++|||+++.+.+++++..+++..++
T Consensus 23 ~~~~~V~l~~~~~~~lG~~l~~~~~~~--~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 100 (114)
T 2gzv_A 23 MVPGKVTLQKDAQNLIGISIGGGAQYC--PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG 100 (114)
T ss_dssp CCCEEEEEECCTTSCCSEEEEECCC----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS
T ss_pred CCCEEEEEEECCCCcEeEEEEeCCCCC--CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 356899999988888999999876542 579999999999999999999999999999999998999999999998888
Q ss_pred eEEEEEEeC
Q psy8436 83 HVEIVICRN 91 (306)
Q Consensus 83 ~v~L~v~r~ 91 (306)
.|.|+|.+.
T Consensus 101 ~v~l~v~~~ 109 (114)
T 2gzv_A 101 EVTIHYNKL 109 (114)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEec
Confidence 899998654
No 120
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.63 E-value=2.8e-15 Score=110.60 Aligned_cols=89 Identities=19% Similarity=0.305 Sum_probs=75.1
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCC-------cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGA-------HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREAL 77 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~-------~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l 77 (306)
-++|.|.|.....|||++.+..... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+|
T Consensus 5 p~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (103)
T 2fcf_A 5 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 84 (103)
T ss_dssp CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4789999988789999998864321 124899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCC
Q psy8436 78 NNKDSHVEIVICRNPD 93 (306)
Q Consensus 78 ~~~~~~v~L~v~r~~~ 93 (306)
+.+++.+.|+|.|...
T Consensus 85 ~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 85 RKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HTCCSSEEEEEECCCC
T ss_pred HhCCCcEEEEEEECCC
Confidence 9988899999998653
No 121
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.63 E-value=1.9e-15 Score=111.52 Aligned_cols=86 Identities=28% Similarity=0.399 Sum_probs=73.7
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC------cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA------HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREA 76 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~------~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~ 76 (306)
.+..+|.+.+.+ +|||+|.++.... ...|++|..|.++|||++ | |++||+|++|||+++.++++.+++.+
T Consensus 10 ~~~~~v~l~~~~--~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~ 85 (103)
T 1n7t_A 10 KQEIRVRVEKDP--ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSL 85 (103)
T ss_dssp CCCEEEEEECSS--CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred cEEEEEEEccCC--CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHHH
Confidence 345667788753 8999999975310 235899999999999999 8 99999999999999999999999999
Q ss_pred HhcCCCeEEEEEEeCC
Q psy8436 77 LNNKDSHVEIVICRNP 92 (306)
Q Consensus 77 l~~~~~~v~L~v~r~~ 92 (306)
++.++..+.|+|.|..
T Consensus 86 ~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 86 LKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHCCSEEEEEEECCC
T ss_pred hhcCCCeEEEEEEecC
Confidence 9998899999999864
No 122
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=6e-16 Score=114.90 Aligned_cols=88 Identities=23% Similarity=0.387 Sum_probs=78.3
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+...|+|.|.| .+.+|||+|.+.... .|++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++.++
T Consensus 6 ~~~~r~v~l~k-~~~~~G~~l~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 80 (106)
T 2eei_A 6 SGQPRLCYLVK-EGGSYGFSLKTVQGK---KGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKSG 80 (106)
T ss_dssp CSSSEEEEEEC-CSSSCSCCEECCSSC---CSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHHC
T ss_pred CCCCEEEEEEE-CCCCCCEEEEeccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45679999999 577999999876543 589999999999999999 9999999999999999999999999999888
Q ss_pred CeEEEEEEeCCCC
Q psy8436 82 SHVEIVICRNPDD 94 (306)
Q Consensus 82 ~~v~L~v~r~~~~ 94 (306)
..+.|+|.|....
T Consensus 81 ~~v~l~v~r~~~~ 93 (106)
T 2eei_A 81 SRVMFLLVDKETD 93 (106)
T ss_dssp SEEEEEECCTTTS
T ss_pred CeEEEEEEcCchh
Confidence 8999999886543
No 123
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.62 E-value=5.5e-15 Score=107.78 Aligned_cols=87 Identities=29% Similarity=0.456 Sum_probs=75.4
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCC----cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGA----HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~----~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
...+.+.+. ..+|||+|.++.... ...|++|..|.++|||+++| |++||+|++|||+++.++++.++...++..
T Consensus 4 ~~~v~~~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 4 ELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp EEEEEEECB-TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred EEEEEEEeC-CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 456788885 679999999875421 23689999999999999999 999999999999999999999999999888
Q ss_pred CCeEEEEEEeCCC
Q psy8436 81 DSHVEIVICRNPD 93 (306)
Q Consensus 81 ~~~v~L~v~r~~~ 93 (306)
+..+.|+|.|+..
T Consensus 82 g~~v~l~v~R~g~ 94 (97)
T 2w4f_A 82 GTAVQMRVWRERE 94 (97)
T ss_dssp CSEEEEEEECCSS
T ss_pred CCeEEEEEEeCCc
Confidence 8999999998753
No 124
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=6.8e-15 Score=109.89 Aligned_cols=90 Identities=29% Similarity=0.460 Sum_probs=78.1
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCC----cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGA----HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREAL 77 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~----~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l 77 (306)
+.+...+.+.+. ..+|||+|.++.... ...|++|..|.++|||+++| |++||+|++|||+.+.++++.++...+
T Consensus 13 ~~~~~~~~l~~~-~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~ 90 (110)
T 1x5q_A 13 EEEELTLTILRQ-TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEAL 90 (110)
T ss_dssp CCEEEEEEEECS-SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcceEEEEEecC-CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHh
Confidence 445677888885 679999999875421 23689999999999999999 999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCC
Q psy8436 78 NNKDSHVEIVICRNPD 93 (306)
Q Consensus 78 ~~~~~~v~L~v~r~~~ 93 (306)
+..+..|.|+|.|+..
T Consensus 91 ~~~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 91 RGAGTAVQMRVWRESG 106 (110)
T ss_dssp HSCCSEEEEEEEECSS
T ss_pred hCCCCeEEEEEEECCc
Confidence 9888999999999754
No 125
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.62 E-value=3.6e-15 Score=113.54 Aligned_cols=89 Identities=19% Similarity=0.305 Sum_probs=77.1
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCC-------cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGA-------HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREAL 77 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~-------~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l 77 (306)
.++|.+.|....+|||++.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|
T Consensus 25 p~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 104 (123)
T 2iwq_A 25 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 104 (123)
T ss_dssp CEEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CEEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4788899887789999998763311 125899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEEEEeCCC
Q psy8436 78 NNKDSHVEIVICRNPD 93 (306)
Q Consensus 78 ~~~~~~v~L~v~r~~~ 93 (306)
+..++.|.|+|.|...
T Consensus 105 ~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 105 RKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHCCSSEEEEEECCCC
T ss_pred HcCCCeEEEEEEECCc
Confidence 9988899999998653
No 126
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.62 E-value=5.3e-16 Score=109.87 Aligned_cols=80 Identities=18% Similarity=0.366 Sum_probs=72.5
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..|+|.|.|.. .+|||++.++ .+++|..|.++|||+++| |+.||+|++|||+++.+++|+++..+++.+++.
T Consensus 2 ~~r~v~l~~~~-~g~G~~~~~~------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 73 (83)
T 2kv8_A 2 RVRSVEVARGR-AGYGFTLSGQ------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCSGV 73 (83)
T ss_dssp CEEEEEECCCS-SCCSCBCCCS------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCSSC
T ss_pred CcEEEEEEeCC-CcccEEEEcC------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 46889999965 6899999753 369999999999999999 999999999999999999999999999988888
Q ss_pred EEEEEEeC
Q psy8436 84 VEIVICRN 91 (306)
Q Consensus 84 v~L~v~r~ 91 (306)
+.|+|.|+
T Consensus 74 v~l~v~R~ 81 (83)
T 2kv8_A 74 LHMVIAEG 81 (83)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 99999886
No 127
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.62 E-value=3.3e-15 Score=107.64 Aligned_cols=83 Identities=14% Similarity=0.296 Sum_probs=72.5
Q ss_pred EEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEE
Q psy8436 6 KVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVE 85 (306)
Q Consensus 6 ~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~ 85 (306)
+.|.+.. ..+|||++.++.... .|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..+..+.
T Consensus 5 ~~v~~~~--~~~~G~~l~~~~~~~--~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2pkt_A 5 QQIDLQG--PGPWGFRLVGGKDFE--QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLT 79 (91)
T ss_dssp EEEEEES--SSCCSEEEEEEGGGT--EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEE
T ss_pred EEEEECC--CCCCCEEEEccCCCC--CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEE
Confidence 4555554 468999999885432 579999999999999999 99999999999999999999999999999888999
Q ss_pred EEEEeCCC
Q psy8436 86 IVICRNPD 93 (306)
Q Consensus 86 L~v~r~~~ 93 (306)
|+|.|...
T Consensus 80 l~v~R~g~ 87 (91)
T 2pkt_A 80 LTVARSEH 87 (91)
T ss_dssp EEEEEECC
T ss_pred EEEEECCc
Confidence 99999754
No 128
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=1.4e-15 Score=112.19 Aligned_cols=74 Identities=28% Similarity=0.417 Sum_probs=65.1
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.|.|.|.. .+|||+|.++.+... ..+||..|.+++||+++|+|++||+|++|||+++.+++|++|+++|++.
T Consensus 7 ~~~v~l~k~~--~glG~~i~gg~~~~~--~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 80 (103)
T 1ufx_A 7 GTLVRVKKSA--ATLGIAIEGGANTRQ--PLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEA 80 (103)
T ss_dssp SEEEEEECCS--SSCCEEEECBTTSSC--SSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHH
T ss_pred eEEEEEEcCC--CcCCeEEECCCCCCC--CcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 4578887764 789999999887531 2359999999999999999999999999999999999999999999987
No 129
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=9.1e-16 Score=115.85 Aligned_cols=84 Identities=48% Similarity=0.810 Sum_probs=72.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..+++|.|.|.+ .+|||++.++.+.+.+..|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+..
T Consensus 24 ~~~~~v~L~k~~--~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 101 (117)
T 2fne_A 24 PQCKSITLERGP--DGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRT 101 (117)
T ss_dssp CEEEEEEECCBT--TBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CccEEEEEEeCC--CcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456789999885 689999999876543346899999999999999999999999999999999999999999999986
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+. .+.|
T Consensus 102 ~~-~v~l 107 (117)
T 2fne_A 102 KG-TVTL 107 (117)
T ss_dssp CS-SEEE
T ss_pred CC-eEEE
Confidence 65 3544
No 130
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.62 E-value=5e-15 Score=109.08 Aligned_cols=84 Identities=30% Similarity=0.565 Sum_probs=72.1
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
.+++.|.|.|.. .+|||++.++.+.+. +..|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++
T Consensus 3 ~~~~~v~l~k~~--~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 80 (102)
T 2i1n_A 3 FKYEEIVLERGN--SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALK 80 (102)
T ss_dssp EEEEEEEEECBT--TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred ceEEEEEEEECC--CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457789999874 689999999887543 2469999999999999999999999999999999999999999999998
Q ss_pred hcCCCceec
Q psy8436 297 DIFPQSSKL 305 (306)
Q Consensus 297 ~~~~~~~~l 305 (306)
.. +..+.|
T Consensus 81 ~~-g~~v~l 88 (102)
T 2i1n_A 81 EA-GPVVRL 88 (102)
T ss_dssp HS-CSEEEE
T ss_pred cC-CCeEEE
Confidence 84 455543
No 131
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=8.7e-15 Score=111.56 Aligned_cols=85 Identities=32% Similarity=0.542 Sum_probs=73.2
Q ss_pred CCccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 216 SLSLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMF 295 (306)
Q Consensus 216 ~~~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~L 295 (306)
......++|.|.+.. .+|||++.++.+. ..|++|..|.++++|+++|+|++||+|++|||+++.++++++++.+|
T Consensus 15 ~~~~~~~~v~l~~~~--~glG~~~~~g~~~---~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (123)
T 1ueq_A 15 QLKGTFLSTTLKKSN--MGFGFTIIGGDEP---DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLF 89 (123)
T ss_dssp TCCSEEEEEEEECCT--TSCSEEEECCSSS---SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred cCCCcEEEEEEEeCC--CceeEEEecccCC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 345677889999884 6899999987653 25899999999999999999999999999999999999999999999
Q ss_pred hhcC-CCceec
Q psy8436 296 KDIF-PQSSKL 305 (306)
Q Consensus 296 k~~~-~~~~~l 305 (306)
+..+ +..+.|
T Consensus 90 ~~~~~g~~v~l 100 (123)
T 1ueq_A 90 QSVPIGQSVNL 100 (123)
T ss_dssp HTSCTTCEEEE
T ss_pred HhCCCCCeEEE
Confidence 9976 555554
No 132
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.62 E-value=6.4e-15 Score=106.58 Aligned_cols=81 Identities=21% Similarity=0.375 Sum_probs=71.9
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..|+|.|.|. ..+|||.+.+. .|++|..|.++|||+++| |+.||+|++|||+++.++++.+++..++ .+..
T Consensus 8 ~~r~v~l~~~-~~~~G~~l~~~------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~-~g~~ 78 (93)
T 2dls_A 8 VQRCVIIQKD-QHGFGFTVSGD------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIK-SGAY 78 (93)
T ss_dssp CEEEEEEECS-SSSCCEEEECS------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHT-SSSE
T ss_pred CCEEEEEEeC-CCceeEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhc-CCCE
Confidence 4688999885 46999999853 479999999999999999 9999999999999999999999999887 5789
Q ss_pred EEEEEEeCCC
Q psy8436 84 VEIVICRNPD 93 (306)
Q Consensus 84 v~L~v~r~~~ 93 (306)
|.|+|.|+..
T Consensus 79 v~l~v~R~~~ 88 (93)
T 2dls_A 79 VALTLLGSSS 88 (93)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEECCC
Confidence 9999999754
No 133
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.62 E-value=5.7e-15 Score=110.32 Aligned_cols=85 Identities=26% Similarity=0.518 Sum_probs=74.1
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
....++|.|.|.. .+|||++.++.+.+.+..|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 6 ~~~~~~v~l~~~~--~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 83 (110)
T 1um1_A 6 SGYVFTVELERGP--SGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH 83 (110)
T ss_dssp CCCEEEEEEECCT--TCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT
T ss_pred CCcEEEEEEEECC--CccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3567889999885 68999999988776556799999999999999999999999999999999999999999999988
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
. +..+.|
T Consensus 84 ~-~~~v~l 90 (110)
T 1um1_A 84 G-GKKMRF 90 (110)
T ss_dssp C-CSEEEE
T ss_pred C-CCeEEE
Confidence 5 454443
No 134
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.62 E-value=5.5e-15 Score=107.15 Aligned_cols=84 Identities=35% Similarity=0.648 Sum_probs=71.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
.++++|+|.|.+ .+|||++.++.+.+. +..|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++
T Consensus 2 ~~~~~v~l~k~~--~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 79 (94)
T 2fe5_A 2 MTIMEVNLLKGP--KGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLK 79 (94)
T ss_dssp CCEEEEEEECCT--TCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHH
T ss_pred cEEEEEEEEECC--CCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457889999985 689999999876532 2458999999999999999989999999999999999999999999998
Q ss_pred hcCCCceec
Q psy8436 297 DIFPQSSKL 305 (306)
Q Consensus 297 ~~~~~~~~l 305 (306)
.... .+.|
T Consensus 80 ~~~~-~v~l 87 (94)
T 2fe5_A 80 NTSD-MVYL 87 (94)
T ss_dssp TCCS-EEEE
T ss_pred cCCC-eEEE
Confidence 7654 4443
No 135
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.62 E-value=2.5e-15 Score=123.58 Aligned_cols=88 Identities=22% Similarity=0.318 Sum_probs=79.7
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
..++.|.|.|..+.+|||++.++.... .|++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|+. +.
T Consensus 83 ~~~~~v~l~k~~~~~lG~~i~~~~~~~--~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~ 158 (192)
T 3k1r_A 83 RKLKEVRLDRLHPEGLGLSVRGGLEFG--CGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT-EK 158 (192)
T ss_dssp SSCEEEEEETTSTTCCCEEEEEEGGGT--EEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-SS
T ss_pred CceEEEEEEeCCCCceeEEEEcccccC--CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-CC
Confidence 467899999987889999999885432 589999999999999999 99999999999999999999999999999 88
Q ss_pred eEEEEEEeCCCC
Q psy8436 83 HVEIVICRNPDD 94 (306)
Q Consensus 83 ~v~L~v~r~~~~ 94 (306)
.|.|+|.|....
T Consensus 159 ~v~l~v~r~g~~ 170 (192)
T 3k1r_A 159 TVSIKVRHIGLI 170 (192)
T ss_dssp EEEEEEEECCEE
T ss_pred eEEEEEEECCcc
Confidence 999999997653
No 136
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.61 E-value=5.2e-15 Score=109.36 Aligned_cols=89 Identities=19% Similarity=0.311 Sum_probs=73.8
Q ss_pred ccccEEEEEEeCCC---CceeEEEEecCCC----------CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCC
Q psy8436 2 EKQFKVFRVVKDDS---NELGIYIERQDGG----------AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGL 68 (306)
Q Consensus 2 ~~~~~~v~l~r~~~---~~lG~~i~gg~~~----------~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~ 68 (306)
.+-++.+.+.+... .+|||++.|+... ....|++|..|.++|||+++| |+.||+|++|||+++.++
T Consensus 2 ~~~~~~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~ 80 (104)
T 3sfj_A 2 TAVVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMV 80 (104)
T ss_dssp CCEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTC
T ss_pred CcceEEEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCC
Confidence 44566777776433 3699999987542 224689999999999999999 999999999999999999
Q ss_pred CHHHHHHHHhcC-CCeEEEEEEeC
Q psy8436 69 TIQEAREALNNK-DSHVEIVICRN 91 (306)
Q Consensus 69 ~~~~a~~~l~~~-~~~v~L~v~r~ 91 (306)
+|+++..+++.. +..+.|+|.|.
T Consensus 81 ~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 81 THDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp CHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CHHHHHHHHHhCCCCEEEEEEEcC
Confidence 999999999865 57899999873
No 137
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.61 E-value=2.7e-15 Score=115.54 Aligned_cols=86 Identities=24% Similarity=0.376 Sum_probs=71.9
Q ss_pred ceEEEEEEeC--------CCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHH
Q psy8436 220 SMFTVTFQKG--------PGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEA 291 (306)
Q Consensus 220 ~~~~v~l~k~--------~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~ea 291 (306)
.+..+.+.+. ....+|||+|.++.+...+..|+||..|.++|||+++|+|++||+|++|||+++.+++|+++
T Consensus 27 ~i~~v~l~~~~~~~~i~k~~~~~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~ 106 (131)
T 1wfg_A 27 LIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEV 106 (131)
T ss_dssp EEEEEEEECSCTTSCCCSCSCTTTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHH
T ss_pred eeeEEEEeccceeEEEecCCCCCCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 3456666665 22478999999988766555699999999999999999999999999999999999999999
Q ss_pred HHHHhhc-CCCceec
Q psy8436 292 IAMFKDI-FPQSSKL 305 (306)
Q Consensus 292 v~~Lk~~-~~~~~~l 305 (306)
+.+|++. ++..+.|
T Consensus 107 ~~~l~~~~~g~~v~l 121 (131)
T 1wfg_A 107 YNIILESKPEPQVEL 121 (131)
T ss_dssp HHHHHHTSSSSEEEE
T ss_pred HHHHHhcCCCCEEEE
Confidence 9999998 4455544
No 138
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.2e-15 Score=112.08 Aligned_cols=89 Identities=22% Similarity=0.325 Sum_probs=77.4
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+.+++++.+.+....+|||++.++.... .+++|..|.++|||+++|.|++||+|++|||+++.++ +.+++.+++.++
T Consensus 7 ~~~~~~~~v~~~~~~~~G~~~~gg~~~~--~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~ 83 (100)
T 2edp_A 7 GGSFQYVPVQLQGGAPWGFTLKGGLEHC--EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSF 83 (100)
T ss_dssp CCCCEEEEEECCSCSCCCCCEEEEGGGT--EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCC
T ss_pred CCCcEEEEEEECCCCCcCEEEeccCCCC--CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCC
Confidence 4578888888877789999999875432 4799999999999999933999999999999999997 899999999988
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
..|.|+|.|...
T Consensus 84 ~~v~l~v~R~~~ 95 (100)
T 2edp_A 84 RILKLIVRRRNS 95 (100)
T ss_dssp SSCEEEEEECCC
T ss_pred CeEEEEEEeCCC
Confidence 899999999754
No 139
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.61 E-value=7e-15 Score=105.57 Aligned_cols=88 Identities=16% Similarity=0.395 Sum_probs=72.3
Q ss_pred CccccEEEEEEeCCC--CceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 1 MEKQFKVFRVVKDDS--NELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALN 78 (306)
Q Consensus 1 ~~~~~~~v~l~r~~~--~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~ 78 (306)
|-+..+.|.|.|... .+|||+|.+..... ..|++|..|.++|||+++| |+.||+|++|||+++.+++++++..+++
T Consensus 3 ~~~~~~~v~i~k~~~~~~~~Gf~v~~~~~~~-~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~ 80 (94)
T 3kzd_A 3 MGKVTHSIHIEKSDTAADTYGFSLSSVEEDG-IRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLS 80 (94)
T ss_dssp -CCEEEEEEEEC------CCSEEEEEECSSS-SCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHH
T ss_pred cccceeEEEEEeCCCCcCCcCEEEEecCCCC-cCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHh
Confidence 567789999999754 48999998854221 2589999999999999999 9999999999999999999999999998
Q ss_pred cCCCeEEEEEEeCC
Q psy8436 79 NKDSHVEIVICRNP 92 (306)
Q Consensus 79 ~~~~~v~L~v~r~~ 92 (306)
+ ..++|+|...+
T Consensus 81 ~--~~l~ltV~~~p 92 (94)
T 3kzd_A 81 Q--PSLGLLVRTYP 92 (94)
T ss_dssp S--SEEEEEEEECC
T ss_pred C--CeEEEEEEecC
Confidence 6 47888887643
No 140
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.61 E-value=4.8e-15 Score=106.78 Aligned_cols=77 Identities=22% Similarity=0.471 Sum_probs=68.5
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.+++|+|.|.+ .+|||++.++.+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|++.+
T Consensus 3 ~~r~v~l~r~~--~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 75 (91)
T 1g9o_A 3 LPRLCCLEKGP--NGYGFHLHGEKGK----LGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETHQQVVSRIRAAL 75 (91)
T ss_dssp CCEEEEEECBT--TBCCEEEEECTTC----SSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred ccEEEEEEeCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 46789999986 5899999987753 589999999999999999 9999999999999999999999999999876
Q ss_pred CCce
Q psy8436 300 PQSS 303 (306)
Q Consensus 300 ~~~~ 303 (306)
+...
T Consensus 76 ~~~~ 79 (91)
T 1g9o_A 76 NAVR 79 (91)
T ss_dssp SEEE
T ss_pred CcEE
Confidence 5443
No 141
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.61 E-value=7.1e-15 Score=106.79 Aligned_cols=82 Identities=26% Similarity=0.466 Sum_probs=70.3
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.+.|.|.|.....+|||++.++.+. .|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 2 ~~~~~v~l~k~~~~~~lG~~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 77 (95)
T 2vwr_A 2 MEILQVALHKRDSGEQLGIKLVRRTDE----PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS 77 (95)
T ss_dssp EEEEEEEEECSSTTCCCCEEEEECSSS----CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred cEEEEEEEEECCCCCcccEEEEeccCC----CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 356789999874447899999887763 5899999999999999999999999999999999999999999999875
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 78 -g~~v~l 83 (95)
T 2vwr_A 78 -GERVNL 83 (95)
T ss_dssp -CSEEEE
T ss_pred -CCEEEE
Confidence 454443
No 142
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.61 E-value=3.3e-15 Score=113.73 Aligned_cols=93 Identities=24% Similarity=0.297 Sum_probs=80.0
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCC--CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGG--AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN 79 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~--~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~ 79 (306)
+.+.++|.|.|....+|||+|.++... ....+++|..|.+++||+++|.|++||+|++|||+++.+++++++..+|+.
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 92 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 92 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHH
T ss_pred cceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 457889999998788999999987311 112469999999999999999999999999999999999999999999998
Q ss_pred C--CCeEEEEEEeCCCC
Q psy8436 80 K--DSHVEIVICRNPDD 94 (306)
Q Consensus 80 ~--~~~v~L~v~r~~~~ 94 (306)
. +..|.|+|.|+...
T Consensus 93 ~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 93 SSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HTTTTCEEEEEEEECCC
T ss_pred CCCCCeEEEEEEECCcc
Confidence 7 57899999997643
No 143
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.61 E-value=1.6e-15 Score=116.46 Aligned_cols=85 Identities=33% Similarity=0.548 Sum_probs=73.6
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCC-CCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLE-NKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~-~~~~~eav~~Lk~ 297 (306)
..++.|.|.|... .+|||+|.++.+...+..|+||..|.++|||+++|+|++||+|++|||+++. +++|++++.+|+.
T Consensus 24 ~~~~~v~l~k~~~-~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 102 (128)
T 2db5_A 24 RQIEYIDIERPST-GGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ 102 (128)
T ss_dssp CEEEEEEEECCSS-SCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH
T ss_pred CceEEEEEEECCC-CccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 4578899999864 6899999998876555569999999999999999999999999999999997 9999999999998
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
. +..+.|
T Consensus 103 ~-~~~v~l 109 (128)
T 2db5_A 103 T-TGSLRL 109 (128)
T ss_dssp C-CSEEEE
T ss_pred C-CCeEEE
Confidence 4 455544
No 144
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.61 E-value=5.7e-15 Score=109.37 Aligned_cols=83 Identities=39% Similarity=0.681 Sum_probs=71.1
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
..++|.|.|.+ .+|||++.++.+.+. +..|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.++++
T Consensus 3 ~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 3 KIMEIKLIKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp CEEEEEEECBT--TBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred eEEEEEEEECC--CCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 46789999886 689999999876432 23589999999999999999999999999999999999999999999987
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
. +..+.|
T Consensus 81 ~-~~~v~l 87 (105)
T 2awx_A 81 T-SDFVYL 87 (105)
T ss_dssp C-CSEEEE
T ss_pred C-CCeEEE
Confidence 6 455443
No 145
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.61 E-value=6.3e-15 Score=105.46 Aligned_cols=82 Identities=24% Similarity=0.405 Sum_probs=69.9
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KD 81 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~ 81 (306)
++++|.|.|.. .+|||++.+.... .+++|..| ++|||+ +| |+.||+|++|||+++.+++++++..+|+. .+
T Consensus 3 ~~~~v~l~k~~-~g~G~~~~~~~~~---~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 75 (88)
T 3bpu_A 3 ELITVHIVKGP-MGFGFTIADSPGG---GGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVESPKG 75 (88)
T ss_dssp EEEEEEEECBT-TBSSCEEEECTTS---SSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTSCTT
T ss_pred cEEEEEEEcCC-CceeEEEEecCCC---CcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCC
Confidence 67899999954 6999999976543 57999987 999999 88 99999999999999999999999999985 47
Q ss_pred CeEEEEEEeCC
Q psy8436 82 SHVEIVICRNP 92 (306)
Q Consensus 82 ~~v~L~v~r~~ 92 (306)
..+.|+|.|..
T Consensus 76 ~~v~l~v~R~g 86 (88)
T 3bpu_A 76 SEVTLLVQRQT 86 (88)
T ss_dssp CEEEEEEEEEC
T ss_pred CEEEEEEEeCC
Confidence 78999998864
No 146
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.61 E-value=6.2e-15 Score=111.28 Aligned_cols=84 Identities=36% Similarity=0.675 Sum_probs=71.6
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
.+++.|.|.|+. .+|||+|.++.+.+. +..|++|..|.++|||+++|+|++||+|++|||+++.++++++++.+|+
T Consensus 23 ~~~~~v~l~k~~--~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~ 100 (117)
T 2byg_A 23 MTVVEIKLFKGP--KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILK 100 (117)
T ss_dssp EEEEEEEEECBT--TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred CceEEEEEEeCC--CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 456788898875 789999999876532 2468999999999999999999999999999999999999999999999
Q ss_pred hcCCCceec
Q psy8436 297 DIFPQSSKL 305 (306)
Q Consensus 297 ~~~~~~~~l 305 (306)
+. +..+.|
T Consensus 101 ~~-g~~v~l 108 (117)
T 2byg_A 101 NT-SEVVYL 108 (117)
T ss_dssp TC-CSEEEE
T ss_pred cC-CCeEEE
Confidence 76 455544
No 147
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.61 E-value=1.4e-14 Score=108.40 Aligned_cols=91 Identities=27% Similarity=0.433 Sum_probs=76.4
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-- 80 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-- 80 (306)
+...+.+.+ ...+|||+|.++.... ...|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+.+
T Consensus 11 ~~~~~~l~~-~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 89 (111)
T 2koj_A 11 KRLNIQLKK-GTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKM 89 (111)
T ss_dssp EEEEEEEEC-BTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCC
T ss_pred cEEEEEEEE-CCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 345667777 4569999999875321 125799999999999999999999999999999999999999999999986
Q ss_pred CCeEEEEEEeCCCCC
Q psy8436 81 DSHVEIVICRNPDDA 95 (306)
Q Consensus 81 ~~~v~L~v~r~~~~~ 95 (306)
+..|.|+|.|.....
T Consensus 90 g~~v~l~v~R~~~~~ 104 (111)
T 2koj_A 90 EGTVSLLVFRQEEAF 104 (111)
T ss_dssp SSEEEEEEEECCCCC
T ss_pred CCeEEEEEEeCCCCc
Confidence 678999999976543
No 148
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.61 E-value=3e-15 Score=107.64 Aligned_cols=81 Identities=26% Similarity=0.509 Sum_probs=69.7
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..++|.|.|.. .+|||++.++.+.. .+++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|++.+
T Consensus 2 ~~~~v~l~~~~--~g~G~~~~~g~~~~---~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 76 (90)
T 2q9v_A 2 MEQDIFLWRKE--TGFGFRILGGNEPG---EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAA 76 (90)
T ss_dssp EEEEEEEECBT--TBCCEEEEECSSTT---SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHH
T ss_pred CcEEEEEEECC--CccCEEEEccccCC---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35688999885 68999999887642 57999999999999999999999999999999999999999999999876
Q ss_pred CC-ceec
Q psy8436 300 PQ-SSKL 305 (306)
Q Consensus 300 ~~-~~~l 305 (306)
.+ .+.|
T Consensus 77 ~~~~v~l 83 (90)
T 2q9v_A 77 KQGHVNL 83 (90)
T ss_dssp HHTEEEE
T ss_pred CCCeEEE
Confidence 43 4443
No 149
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.60 E-value=5e-15 Score=118.92 Aligned_cols=84 Identities=30% Similarity=0.567 Sum_probs=71.8
Q ss_pred cceEEEEEEeCCCCCcccEEEEc---CCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVG---GRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMF 295 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~g---g~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~L 295 (306)
...+.|.|.|+. .+|||+|.+ +.+...+..|+||..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|
T Consensus 79 ~~~~~v~l~k~~--~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l 156 (170)
T 3egg_C 79 LELFPVELEKDS--EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 156 (170)
T ss_dssp SEEEEEEEECBT--TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHH
T ss_pred ceEEEEEEEeCC--CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 556789998885 689999998 444433457899999999999999999999999999999999999999999999
Q ss_pred hhcCCCceec
Q psy8436 296 KDIFPQSSKL 305 (306)
Q Consensus 296 k~~~~~~~~l 305 (306)
+.. +..+.|
T Consensus 157 ~~~-g~~v~L 165 (170)
T 3egg_C 157 RNT-KGRVRF 165 (170)
T ss_dssp HHC-CSEEEE
T ss_pred HcC-CCEEEE
Confidence 984 455554
No 150
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.60 E-value=8.7e-15 Score=107.58 Aligned_cols=84 Identities=36% Similarity=0.683 Sum_probs=71.9
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
..++.|+|.|.+ .+|||++.++.+.+. ...|++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 6 ~~~~~v~l~~~~--~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~ 83 (101)
T 2jik_A 6 VTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 83 (101)
T ss_dssp EEEEEEEEECCT--TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHH
T ss_pred CccEEEEEEeCC--CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457889999985 789999999887542 2358999999999999999999999999999999999999999999998
Q ss_pred hcCCCceec
Q psy8436 297 DIFPQSSKL 305 (306)
Q Consensus 297 ~~~~~~~~l 305 (306)
.. +..+.|
T Consensus 84 ~~-g~~v~l 91 (101)
T 2jik_A 84 NA-GYAVSL 91 (101)
T ss_dssp TC-CSEEEE
T ss_pred hC-CCeEEE
Confidence 75 444443
No 151
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=7.6e-16 Score=113.68 Aligned_cols=88 Identities=19% Similarity=0.342 Sum_probs=76.9
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
.+.+.+.|.+.. .+|||++.++.... .+++|..|.++|||+++|+|+.||+|++|||+++.++++.++..+++.++.
T Consensus 10 ~~~~~v~l~~~~-~g~G~~~~~~~~~~--~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 86 (103)
T 1wfv_A 10 FDYFTVDMEKGA-KGFGFSIRGGREYK--MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGR 86 (103)
T ss_dssp SCCEECCEECCT-TSSSBCCEEETTTT--EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCS
T ss_pred ceEEEEEEecCC-CcCCEEEeccccCC--CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 345677888854 68999999886532 479999999999999999999999999999999999999999999998788
Q ss_pred eEEEEEEeCCC
Q psy8436 83 HVEIVICRNPD 93 (306)
Q Consensus 83 ~v~L~v~r~~~ 93 (306)
.|.|+|.|...
T Consensus 87 ~v~l~v~R~~~ 97 (103)
T 1wfv_A 87 RVRLLLKRGTG 97 (103)
T ss_dssp EECEEEECTTC
T ss_pred eEEEEEEECCC
Confidence 99999998754
No 152
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.60 E-value=3e-15 Score=110.41 Aligned_cols=82 Identities=28% Similarity=0.436 Sum_probs=69.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|.|.|..+ .+|||++.++.+.. .|++|..|.++|||+++++|++||+|++|||+++.+++|.+++.+|++.
T Consensus 8 ~~~~~v~l~~~~~-~~lG~~l~~g~~~~---~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 83 (103)
T 2dc2_A 8 GPIRKVLLLKEDH-EGLGISITGGKEHG---VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ 83 (103)
T ss_dssp -CEEEEEEECCSS-SCCCEEEEEEGGGT---EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHC
T ss_pred CCcEEEEEEeCCC-CccCEEEEeccCCC---CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4467889988764 78999999887642 5899999999999999744999999999999999999999999999987
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
++ .+.|
T Consensus 84 ~~-~v~l 89 (103)
T 2dc2_A 84 RG-EIEF 89 (103)
T ss_dssp CS-EEEE
T ss_pred CC-cEEE
Confidence 65 4444
No 153
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=5.4e-15 Score=109.90 Aligned_cols=85 Identities=31% Similarity=0.599 Sum_probs=72.3
Q ss_pred ccceEEEEEEeCCCCCcccEEEEc---CCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVG---GRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAM 294 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~g---g~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~ 294 (306)
..+.+.|.|.|.. .+|||++.+ +.+......|+||..|.++|||+++|+|++||+|++|||+++.++++.+++.+
T Consensus 7 ~~~~~~v~l~k~~--~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 84 (107)
T 1wf8_A 7 GLELFPVELEKDE--DGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATV 84 (107)
T ss_dssp CEEEEEEEEECBT--TBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHH
T ss_pred CceEEEEEEEECC--CcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3667889998874 689999998 55544445699999999999999999999999999999999999999999999
Q ss_pred HhhcCCCceec
Q psy8436 295 FKDIFPQSSKL 305 (306)
Q Consensus 295 Lk~~~~~~~~l 305 (306)
|+.. ...+.|
T Consensus 85 ~~~~-~~~v~l 94 (107)
T 1wf8_A 85 LRNT-KGNVRF 94 (107)
T ss_dssp HHHC-CSEEEE
T ss_pred HhcC-CCeEEE
Confidence 9885 455544
No 154
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=3.9e-15 Score=107.97 Aligned_cols=83 Identities=16% Similarity=0.240 Sum_probs=72.7
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeE
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHV 84 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v 84 (306)
.+.|.|.+ ..+|||.+.++.... .+++|..|.+++||+++| |+.||+|++|||+++.++++.++..+++..+..+
T Consensus 9 ~~~v~l~~--~~~~G~~l~gg~~~~--~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v 83 (94)
T 2eeg_A 9 PHSVTLRG--PSPWGFRLVGGRDFS--APLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKGCHDHL 83 (94)
T ss_dssp CEEEEECC--SSCCSCCEECCTTTT--SCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHTCCSCE
T ss_pred eEEEEEeC--CCccCEEEECccCCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 46677744 468999999886532 579999999999999999 9999999999999999999999999999888899
Q ss_pred EEEEEeCC
Q psy8436 85 EIVICRNP 92 (306)
Q Consensus 85 ~L~v~r~~ 92 (306)
.|+|.|..
T Consensus 84 ~l~v~R~g 91 (94)
T 2eeg_A 84 TLSVSSGP 91 (94)
T ss_dssp EEEEECCS
T ss_pred EEEEEeCC
Confidence 99998864
No 155
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.60 E-value=1.8e-15 Score=109.78 Aligned_cols=84 Identities=14% Similarity=0.258 Sum_probs=73.9
Q ss_pred EEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEE
Q psy8436 7 VFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEI 86 (306)
Q Consensus 7 ~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L 86 (306)
++.+.+....+|||++.++.... .|++|..|.++|||+++| |++||+|++|||+++.+++|.++..+++..+..+.|
T Consensus 7 ~~~~~~~~~~~lG~~l~~g~~~~--~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 83 (94)
T 1vb7_A 7 GLTVDVAGPAPWGFRISGGRDFH--TPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRL 83 (94)
T ss_dssp CEEEEECSSSCCSBCCEEETTTT--EEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEE
T ss_pred EEEEEecCCCCccEEEecccCCC--CCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 35566667789999999875532 579999999999999999 999999999999999999999999999988888999
Q ss_pred EEEeCCC
Q psy8436 87 VICRNPD 93 (306)
Q Consensus 87 ~v~r~~~ 93 (306)
+|.|+..
T Consensus 84 ~v~R~g~ 90 (94)
T 1vb7_A 84 QLDRSSG 90 (94)
T ss_dssp EEECCCC
T ss_pred EEEECCc
Confidence 9999753
No 156
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.60 E-value=9.3e-15 Score=103.87 Aligned_cols=79 Identities=28% Similarity=0.522 Sum_probs=67.8
Q ss_pred EEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC-C
Q psy8436 222 FTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF-P 300 (306)
Q Consensus 222 ~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~-~ 300 (306)
++|+|.|.. .+|||++.++.+. ..|++|..|.+++||+++|.|++||+|++|||+++.++++.++..+|+..+ +
T Consensus 2 ~~v~l~k~~--~g~G~~i~~~~~~---~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g 76 (85)
T 2i04_A 2 IHTKLRKSS--RGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIG 76 (85)
T ss_dssp EEEEEECBT--TBSSEEEEECCST---TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTT
T ss_pred EEEEEEECC--CCCCEEEEcccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 367888875 6899999987653 257999999999999999889999999999999999999999999999876 4
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
..+.|
T Consensus 77 ~~v~l 81 (85)
T 2i04_A 77 ASVDL 81 (85)
T ss_dssp CEEEE
T ss_pred CeEEE
Confidence 44443
No 157
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.60 E-value=9.5e-15 Score=106.46 Aligned_cols=89 Identities=28% Similarity=0.421 Sum_probs=75.5
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCC--cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGA--HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~--~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
.+..+|.|.+ ...+|||++.+..... ...|++|..|.++|||+++|+|++||+|++|||+++.++++.++..+++.+
T Consensus 3 ~~~~~v~l~~-~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (97)
T 2iwn_A 3 SETFDVELTK-NVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHT 81 (97)
T ss_dssp EEEEEEEEEC-BTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred cEEEEEEEec-CCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3456777877 4678999999874311 125899999999999999999999999999999999999999999999988
Q ss_pred CCeEEEEEEeCC
Q psy8436 81 DSHVEIVICRNP 92 (306)
Q Consensus 81 ~~~v~L~v~r~~ 92 (306)
+..+.|+|.|..
T Consensus 82 ~~~v~l~v~r~g 93 (97)
T 2iwn_A 82 GQTVLLTLMRRG 93 (97)
T ss_dssp CSEEEEEEEEEE
T ss_pred CCeEEEEEEeCC
Confidence 889999998853
No 158
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.60 E-value=4.9e-15 Score=111.93 Aligned_cols=87 Identities=26% Similarity=0.551 Sum_probs=72.0
Q ss_pred ccceEEEEEEeCCC-----CCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHH
Q psy8436 218 SLSMFTVTFQKGPG-----QKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAE 290 (306)
Q Consensus 218 ~~~~~~v~l~k~~~-----~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~e 290 (306)
....+.|.|.|... ..+|||+|.++.+.+. +..|+||..|.++|||+++|+|++||+|++|||+++.+++|.+
T Consensus 10 ~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~ 89 (117)
T 1ujd_A 10 IFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE 89 (117)
T ss_dssp SSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH
T ss_pred CCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH
Confidence 35567888888751 2689999999876532 2358999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCceec
Q psy8436 291 AIAMFKDIFPQSSKL 305 (306)
Q Consensus 291 av~~Lk~~~~~~~~l 305 (306)
++.+|+. ....+.|
T Consensus 90 ~~~~l~~-~~~~v~l 103 (117)
T 1ujd_A 90 VQSIISQ-QSGEAEI 103 (117)
T ss_dssp HHHHHSC-CSSCEEE
T ss_pred HHHHHhc-CCCEEEE
Confidence 9999998 4455544
No 159
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.59 E-value=1.1e-14 Score=110.38 Aligned_cols=83 Identities=29% Similarity=0.521 Sum_probs=72.2
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.+.|.|.. ..+|||+|.++.+.. ..|++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+..
T Consensus 14 ~~~~~v~l~~~~-~~~lG~~i~g~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 90 (119)
T 1x6d_A 14 DGIHVTILHKEE-GAGLGFSLAGGADLE--NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA 90 (119)
T ss_dssp TTEEEEEEECCT-TSCCSEEEECCSSSS--CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT
T ss_pred CCeEEEEEEeCC-CCccCEEEeCCCCCC--CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456778888875 379999999987642 25899999999999999999999999999999999999999999999998
Q ss_pred CCCcee
Q psy8436 299 FPQSSK 304 (306)
Q Consensus 299 ~~~~~~ 304 (306)
+...+.
T Consensus 91 ~~~~~~ 96 (119)
T 1x6d_A 91 REPRQA 96 (119)
T ss_dssp TSSSEE
T ss_pred CCCeEE
Confidence 877653
No 160
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.59 E-value=3.1e-15 Score=112.87 Aligned_cols=90 Identities=27% Similarity=0.426 Sum_probs=78.1
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
+.+.|.|.+. ..+|||+|.++.+.. ..|++|..|.++|||+++|+|+.||+|++|||+++.++++.++..+++.++..
T Consensus 17 ~~~~v~l~~~-~~glG~~l~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 94 (116)
T 2dm8_A 17 QEMIIEISKG-RSGLGLSIVGGKDTP-LNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQK 94 (116)
T ss_dssp SCEEEEEECC-SSCCCCCCBCCTTSS-CSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSE
T ss_pred CEEEEEEEEC-CCcccEEEeCCCCCC-cCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 4678889884 579999999875431 14799999999999999999999999999999999999999999999988889
Q ss_pred EEEEEEeCCCCC
Q psy8436 84 VEIVICRNPDDA 95 (306)
Q Consensus 84 v~L~v~r~~~~~ 95 (306)
|.|+|.|.....
T Consensus 95 v~l~v~R~~~~~ 106 (116)
T 2dm8_A 95 VRLVVYRDEAHY 106 (116)
T ss_dssp EEEEEECCSSCC
T ss_pred EEEEEEeCCccc
Confidence 999999876543
No 161
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.59 E-value=1.2e-14 Score=104.86 Aligned_cols=81 Identities=37% Similarity=0.632 Sum_probs=69.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
++.++|+|.|.+. .+|||++.++.+. .|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+++..
T Consensus 3 ~~~~~v~l~k~~~-~~lG~~~~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 77 (92)
T 2qg1_A 3 SDTLTIGLQKKPG-KGLGLSIVGKRND----TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS 77 (92)
T ss_dssp -CEEEEEEECCTT-SCCSEEEECCSSS----CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred ceEEEEEEEeCCC-CcccEEEEeccCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4578899998764 7899999987653 5899999999999999999999999999999999999999999999875
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
. +.+.|
T Consensus 78 ~-~~v~l 83 (92)
T 2qg1_A 78 L-GTVTL 83 (92)
T ss_dssp C-SEEEE
T ss_pred C-CeEEE
Confidence 3 44443
No 162
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.59 E-value=9.4e-15 Score=105.69 Aligned_cols=79 Identities=25% Similarity=0.408 Sum_probs=68.7
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.++.|.|.|.. .+|||++.++.. ..+++|..|.++|||+++|+|++||+|++|||+++.+++|++++.+|++.+
T Consensus 4 ~~r~v~l~k~~--~~lG~~i~~~~~----~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (93)
T 3o46_A 4 SVKIIRLVKNR--EPLGATIKKDEQ----TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQ 77 (93)
T ss_dssp CCEEEEEEESS--SCCCEEEEECTT----TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCC
T ss_pred cEEEEEEEeCC--CCccEEEEecCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45789999984 699999988622 258999999999999999999999999999999999999999999999877
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+ .+.|
T Consensus 78 ~-~v~l 82 (93)
T 3o46_A 78 G-AITF 82 (93)
T ss_dssp E-EEEE
T ss_pred C-eEEE
Confidence 5 5543
No 163
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.59 E-value=5.9e-15 Score=107.23 Aligned_cols=78 Identities=22% Similarity=0.324 Sum_probs=68.2
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
++.|.|.|..+ .+|||++....+ .|++|.+|.++|||+++|+|++||+|++|||+++.++++++++++|+.. .
T Consensus 13 ~~~v~l~K~~~-~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~ 85 (97)
T 2ejy_A 13 VRLIQFEKVTE-EPMGICLKLNEK-----QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-K 85 (97)
T ss_dssp CEEEEEEECSS-SCCSEEEEECTT-----CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-C
T ss_pred cEEEEEEeCCC-CCeeEEEEeCCC-----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-C
Confidence 57899999875 789999986543 4899999999999999999999999999999999999999999999986 3
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
+.+.|
T Consensus 86 ~~v~L 90 (97)
T 2ejy_A 86 GMISL 90 (97)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 45544
No 164
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=6.8e-15 Score=108.93 Aligned_cols=84 Identities=31% Similarity=0.582 Sum_probs=71.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCC---CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSP---KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMF 295 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~---~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~L 295 (306)
.+.+.|.|.|.. .+|||+|.++.+.+ .+..|+||..|.++|||+++|.|++||+|++|||+++.++++.+++.+|
T Consensus 6 ~~~~~v~l~~~~--~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 83 (105)
T 1wha_A 6 SGRHVACLARSE--RGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLL 83 (105)
T ss_dssp CEEEEEEECCCT--TCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CeeEEEEEEeCC--CccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 556788888875 67999999988742 2246899999999999999999999999999999999999999999999
Q ss_pred hhcCCCceec
Q psy8436 296 KDIFPQSSKL 305 (306)
Q Consensus 296 k~~~~~~~~l 305 (306)
+.. ...+.|
T Consensus 84 ~~~-g~~v~l 92 (105)
T 1wha_A 84 TAA-SPTIAL 92 (105)
T ss_dssp TSC-CSCEEE
T ss_pred HcC-CCeEEE
Confidence 986 444544
No 165
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=1.9e-15 Score=113.44 Aligned_cols=88 Identities=27% Similarity=0.413 Sum_probs=79.0
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
..+.+.|.|.|. ..+|||+|.++... .+++|..|.+++||+++|+|++||+|++|||+++.++++.++..+++..+
T Consensus 13 ~~~~~~v~l~k~-~~glG~~l~~~~~~---~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~~~ 88 (113)
T 1um7_A 13 AREPRKIILHKG-STGLGFNIVGGEDG---EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAG 88 (113)
T ss_dssp CCSEEEEEEECC-SSCSSBCCBCCSTT---CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHSCC
T ss_pred CCceEEEEEEEC-CCcccEEEEeccCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 467899999995 57999999887643 58999999999999999999999999999999999999999999999888
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
..+.|+|.|...
T Consensus 89 ~~v~l~v~r~~~ 100 (113)
T 1um7_A 89 QSVTIVAQYRPE 100 (113)
T ss_dssp SEEEEEEECCHH
T ss_pred CcEEEEEEECcc
Confidence 899999998653
No 166
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=3.4e-15 Score=110.17 Aligned_cols=83 Identities=24% Similarity=0.520 Sum_probs=71.1
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
....+.|.|.+.. .+|||++.++.+. ..+++|..|.++|||+++|+|++||+|++|||+++.+++|++++.+|+.
T Consensus 7 ~~~~~~v~l~~~~--~g~G~~i~~g~~~---~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~ 81 (103)
T 1uep_A 7 GYKELDVHLRRME--SGFGFRILGGDEP---GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHH 81 (103)
T ss_dssp SEEEECCEEESSS--SSCCEEECCCCST---TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred CceEEEEEEEeCC--CccCEEEeeecCC---CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3567788998864 6899999987653 2589999999999999999999999999999999999999999999998
Q ss_pred cC-CCceec
Q psy8436 298 IF-PQSSKL 305 (306)
Q Consensus 298 ~~-~~~~~l 305 (306)
.+ ...+.|
T Consensus 82 ~~~g~~v~l 90 (103)
T 1uep_A 82 AARNGQVNL 90 (103)
T ss_dssp HHHHTEEEE
T ss_pred CCCCCcEEE
Confidence 75 455444
No 167
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.59 E-value=8.9e-15 Score=108.51 Aligned_cols=83 Identities=27% Similarity=0.523 Sum_probs=69.6
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...++|+| |.. .+|||++.++.+......|+||..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 10 ~~~~~v~l-~~~--~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 86 (106)
T 3axa_A 10 PEIITVTL-KKQ--NGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRT 86 (106)
T ss_dssp CCEEEEEE-ECS--SSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred ceEEEEEE-CCC--CccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45677888 553 689999998765444456999999999999999999999999999999999999999999999874
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 87 -g~~v~l 92 (106)
T 3axa_A 87 -SSVVTL 92 (106)
T ss_dssp -CSEEEE
T ss_pred -CCeEEE
Confidence 455443
No 168
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.59 E-value=6.2e-15 Score=110.84 Aligned_cols=85 Identities=15% Similarity=0.309 Sum_probs=77.1
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..+++.|.++....|||.+..+... .|++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++..+..
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~ 88 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRIEKDT---DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKSGNS 88 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEECCTTC---CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSE
T ss_pred CCEEEEEeCCCCCcccEEEEEecCC---CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCE
Confidence 3578999998889999999876443 589999999999999999 999999999999999999999999999988899
Q ss_pred EEEEEEeCC
Q psy8436 84 VEIVICRNP 92 (306)
Q Consensus 84 v~L~v~r~~ 92 (306)
|.|+|.|..
T Consensus 89 v~l~v~R~~ 97 (114)
T 2edz_A 89 VTLLVLDGD 97 (114)
T ss_dssp EEEEEECHH
T ss_pred EEEEEEECC
Confidence 999999864
No 169
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.59 E-value=3.1e-15 Score=110.43 Aligned_cols=86 Identities=16% Similarity=0.293 Sum_probs=75.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
+..+|.|.. ..+|||+|.++.... .+++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++.+++.
T Consensus 5 ~~~~v~l~~--~~~~G~~l~gg~~~~--~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~ 79 (103)
T 1wf7_A 5 SSGSVSLVG--PAPWGFRLQGGKDFN--MPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKACTGS 79 (103)
T ss_dssp CCEEEEEES--SSCCSCCEEEETTTT--EEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHCSSE
T ss_pred CEEEEEEeC--CCccCEEEeccccCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 456777773 478999999986543 569999999999999999 999999999999999999999999999988889
Q ss_pred EEEEEEeCCCC
Q psy8436 84 VEIVICRNPDD 94 (306)
Q Consensus 84 v~L~v~r~~~~ 94 (306)
+.|+|.|....
T Consensus 80 v~l~v~R~g~~ 90 (103)
T 1wf7_A 80 LNMTLQRASAA 90 (103)
T ss_dssp EEEEECCCSCC
T ss_pred EEEEEEeCCCc
Confidence 99999887643
No 170
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.59 E-value=6.7e-15 Score=105.81 Aligned_cols=82 Identities=35% Similarity=0.512 Sum_probs=69.3
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...++|.|.|... .+|||++.++.+.. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 3 ~~~~~v~l~k~~~-~~lG~~i~~~~~~~---~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 78 (90)
T 1qav_A 3 LQRRRVTVRKADA-GGLGISIKGGRENK---MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT 78 (90)
T ss_dssp SSCEEEEEECCTT-TCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CccEEEEEEeCCC-CCcCEEEEcccCCC---CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3467899999753 78999999876532 5899999999999999955999999999999999999999999999986
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
. ..+.|
T Consensus 79 ~-~~v~l 84 (90)
T 1qav_A 79 G-KEVVL 84 (90)
T ss_dssp C-SEEEE
T ss_pred C-CeEEE
Confidence 4 44443
No 171
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.59 E-value=2.5e-15 Score=115.16 Aligned_cols=77 Identities=30% Similarity=0.567 Sum_probs=64.3
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCC-CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPK-GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~-~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.|.|.|.. ..+|||+|.++.+... +..|+||..|.++|||+++|+|++||+|++|||+++.+++|.+|+.+|+..
T Consensus 26 ~~~v~l~k~~-~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 103 (127)
T 1wg6_A 26 TLEIPLNDSG-SAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRS 103 (127)
T ss_dssp EEEEECSSST-TTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHH
T ss_pred EEEEEEeeCC-CCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHh
Confidence 4456665443 4799999998765321 124899999999999999999999999999999999999999999999976
No 172
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.58 E-value=1.8e-14 Score=108.88 Aligned_cols=85 Identities=33% Similarity=0.541 Sum_probs=71.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC------CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK------GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAI 292 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~------~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav 292 (306)
...++|.|.|... .+|||+|.++.+... ...|+||..|.++|||+++|+|++||+|++|||+++.+++|.+++
T Consensus 14 ~~~~~v~l~k~~~-~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 92 (117)
T 2ehr_A 14 GPPRIVEIFREPN-VSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAV 92 (117)
T ss_dssp CCCEEEEECCCSS-SCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHH
T ss_pred CCCEEEEEEeCCC-CccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4567899998853 789999999876421 135899999999999999988999999999999999999999999
Q ss_pred HHHhhcCCCceec
Q psy8436 293 AMFKDIFPQSSKL 305 (306)
Q Consensus 293 ~~Lk~~~~~~~~l 305 (306)
.+|+.. +..+.|
T Consensus 93 ~~~~~~-g~~v~l 104 (117)
T 2ehr_A 93 EAIKNA-GNPVVF 104 (117)
T ss_dssp HHHHTS-CSSEEE
T ss_pred HHHHcC-CCeEEE
Confidence 999984 444443
No 173
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.58 E-value=6.9e-15 Score=109.23 Aligned_cols=83 Identities=18% Similarity=0.292 Sum_probs=72.9
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
...|+|.|.|. ..+|||.+.+. .+++|..|.++|||+++| |+.||+|++|||+++.+++++++..+++.+++
T Consensus 22 ~~~r~v~l~k~-~~~~G~~l~~~------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~ 93 (109)
T 2vsv_A 22 SMPRSIRFTAE-EGDLGFTLRGN------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFGE 93 (109)
T ss_dssp HSCEEEEECCG-GGCCCEEEESS------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CCCEEEEEEeC-CCceeEEEeCC------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 45789999995 57999999643 468999999999999999 99999999999999999999999999998877
Q ss_pred e-EEEEEEeCCC
Q psy8436 83 H-VEIVICRNPD 93 (306)
Q Consensus 83 ~-v~L~v~r~~~ 93 (306)
. |.|+|.|...
T Consensus 94 ~~v~l~V~~~~~ 105 (109)
T 2vsv_A 94 DEIEMKVVSLLD 105 (109)
T ss_dssp SCEEEEEESCC-
T ss_pred CeEEEEEEECCC
Confidence 5 9999988643
No 174
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=2e-14 Score=106.76 Aligned_cols=85 Identities=38% Similarity=0.560 Sum_probs=70.7
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCC-----CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHH
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSP-----KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAI 292 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~-----~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav 292 (306)
.+..++|+|.|.. .+|||+|.++.+.. ....|+||..|.++|||+++|+|++||+|++|||+++.+++|.+++
T Consensus 6 ~~~~~~v~l~k~~--~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~ 83 (107)
T 1uhp_A 6 SGKSLTLVLHRDS--GSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAV 83 (107)
T ss_dssp SSEEEEEEECCSS--SCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEEEeCC--CccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3667889999883 78999999887531 1236899999999999999955999999999999999999999999
Q ss_pred HHHhhcCCCceec
Q psy8436 293 AMFKDIFPQSSKL 305 (306)
Q Consensus 293 ~~Lk~~~~~~~~l 305 (306)
.+|+... ..+.|
T Consensus 84 ~~~~~~~-~~v~l 95 (107)
T 1uhp_A 84 EAFKTAK-EPIVV 95 (107)
T ss_dssp HHHHHCC-SSEEE
T ss_pred HHHHcCC-CcEEE
Confidence 9999854 44443
No 175
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.58 E-value=6.9e-15 Score=105.04 Aligned_cols=80 Identities=29% Similarity=0.466 Sum_probs=67.5
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
+++|+|.|... .+|||++.++.+.. .|++|..|.++|||+++++|++||+|++|||+++.+++|.+++.+|++..
T Consensus 3 ~~~v~l~~~~~-~~lG~~i~~~~~~~---~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~- 77 (87)
T 4e34_A 3 IRKVLLLKEDH-EGLGISITGGKEHG---VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR- 77 (87)
T ss_dssp CEEEEEECCTT-BCCCEEEEEEGGGT---EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHCC-
T ss_pred EEEEEEEECCC-CcccEEEEccCCCC---CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-
Confidence 56899998863 78999999876542 57999999999999995349999999999999999999999999999754
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
..+.|
T Consensus 78 ~~v~l 82 (87)
T 4e34_A 78 GEIEF 82 (87)
T ss_dssp SEEEE
T ss_pred CeEEE
Confidence 34443
No 176
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.58 E-value=1.1e-14 Score=106.55 Aligned_cols=85 Identities=13% Similarity=0.199 Sum_probs=71.9
Q ss_pred EEEEEeCCCCceeEEEEecCCCCc-----CCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 7 VFRVVKDDSNELGIYIERQDGGAH-----FSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 7 ~v~l~r~~~~~lG~~i~gg~~~~~-----~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+|.|.| .+.+|||++.++..... ..|++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++.++
T Consensus 5 ~v~l~~-~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g 82 (99)
T 3khf_A 5 PIVIHS-SGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLKSG 82 (99)
T ss_dssp CEEEEC--CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CEEEEe-CCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 466777 67899999987642110 1267899999999999999 9999999999999999999999999999999
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
+.+.|+|.|...
T Consensus 83 ~~v~l~v~r~~~ 94 (99)
T 3khf_A 83 NKISLRTTALEN 94 (99)
T ss_dssp SEEEEEEECSCS
T ss_pred CEEEEEEEECCC
Confidence 999999998654
No 177
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.58 E-value=4.6e-15 Score=112.07 Aligned_cols=85 Identities=36% Similarity=0.610 Sum_probs=72.2
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCC-CCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLE-NKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~-~~~~~eav~~Lk~ 297 (306)
..++.|.|.|... .+|||++.++.+...+..|+||..|.++|||+++|+|++||+|++|||+++. ++++++++.+|+.
T Consensus 19 ~~~~~v~l~k~~~-~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~ 97 (117)
T 2o2t_A 19 RHVEVFELLKPPS-GGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK 97 (117)
T ss_dssp SCEEEEEEECCSS-SCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH
T ss_pred CeEEEEEEEECCC-CCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc
Confidence 4578899999863 7899999988765544579999999999999999999999999999999998 9999999999998
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
. +..+.|
T Consensus 98 ~-~~~v~l 104 (117)
T 2o2t_A 98 A-KDTVQL 104 (117)
T ss_dssp C-CSEEEE
T ss_pred C-CCEEEE
Confidence 4 455544
No 178
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.58 E-value=1.3e-14 Score=105.83 Aligned_cols=83 Identities=27% Similarity=0.516 Sum_probs=70.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCC-CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSP-KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~-~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++|.|.|.. .+|||++.++.+.. ....|++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+.
T Consensus 3 ~~~~v~l~k~~--~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~- 79 (97)
T 2jil_A 3 RTVEVTLHKEG--NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ- 79 (97)
T ss_dssp EEEEEEEECBT--TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-
T ss_pred eEEEEEEEeCC--CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 45678888864 68999999886532 113689999999999999998899999999999999999999999999998
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
++..+.|
T Consensus 80 ~g~~v~l 86 (97)
T 2jil_A 80 CGQEAAL 86 (97)
T ss_dssp SCSEEEE
T ss_pred CCCeEEE
Confidence 6666554
No 179
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.58 E-value=1.6e-14 Score=103.81 Aligned_cols=78 Identities=27% Similarity=0.486 Sum_probs=68.5
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..+.|.|.|+. .+|||++.++.+. .|++|..|.++|||+++| |++||+|++|||+++.+++|+++..+|+..
T Consensus 4 ~~r~v~l~k~~--~g~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 75 (90)
T 2he4_A 4 RPRLCHLRKGP--QGYGFNLHSDKSR----PGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRHAEVVASIKAR- 75 (90)
T ss_dssp CCEEEEEECBT--TBCCEEEEECSSS----SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS-
T ss_pred CcEEEEEEECC--CCccEEEEccCCC----CCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 45789999985 6899999987753 589999999999999999 999999999999999999999999999986
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 76 ~~~v~l 81 (90)
T 2he4_A 76 EDEARL 81 (90)
T ss_dssp SSEEEE
T ss_pred CCcEEE
Confidence 455543
No 180
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.58 E-value=1.1e-14 Score=111.87 Aligned_cols=86 Identities=27% Similarity=0.487 Sum_probs=73.3
Q ss_pred CCCccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 215 KSLSLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAM 294 (306)
Q Consensus 215 ~~~~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~ 294 (306)
........+|.|.++. .+|||++.++.+. ..+++|..|.++|+|+++|+|++||+|++|||+++.+++|.+++.+
T Consensus 13 ~~~~g~~~~v~l~~~~--~g~G~~i~g~~~~---~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 87 (129)
T 2kpk_A 13 SELKGKFIHTKLRKSS--RGFGFTVVGGDEP---DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKI 87 (129)
T ss_dssp TTSCSEEEEEEEEECS--SCCSEEEEEEEET---TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHH
T ss_pred hhcCCcEEEEEEEECC--CcccEEEeCccCC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3445677889999975 6899999986642 2579999999999999999999999999999999999999999999
Q ss_pred HhhcC-CCceec
Q psy8436 295 FKDIF-PQSSKL 305 (306)
Q Consensus 295 Lk~~~-~~~~~l 305 (306)
|+..+ +..+.|
T Consensus 88 l~~~~~g~~v~l 99 (129)
T 2kpk_A 88 FQSIPIGASVDL 99 (129)
T ss_dssp HHHSCTTEEEEE
T ss_pred HHhCCCCCeEEE
Confidence 99987 555544
No 181
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=5.1e-15 Score=108.80 Aligned_cols=88 Identities=24% Similarity=0.410 Sum_probs=75.2
Q ss_pred cccEEEEEEeC-CCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 3 KQFKVFRVVKD-DSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 3 ~~~~~v~l~r~-~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
.+++.|.|.+. ...+|||+|.++.... .|++|..|.+++||+++| |++||+|++|||+++.++++.+++..++..
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~~--~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~- 82 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEHG--VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGS- 82 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTTT--CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSS-
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCC-
Confidence 47888999884 5679999999885432 589999999999999999 999999999999999999998888777664
Q ss_pred CeEEEEEEeCCCC
Q psy8436 82 SHVEIVICRNPDD 94 (306)
Q Consensus 82 ~~v~L~v~r~~~~ 94 (306)
..|.|+|.|....
T Consensus 83 ~~v~l~v~R~g~~ 95 (101)
T 1uez_A 83 KKLVLSVYSAGRI 95 (101)
T ss_dssp SSCCEEECCCCCC
T ss_pred CeEEEEEEECCcc
Confidence 5789999887543
No 182
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.35 E-value=1.6e-16 Score=119.05 Aligned_cols=83 Identities=31% Similarity=0.523 Sum_probs=74.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcc-cCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHR-DGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~-~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
.+++|.|.|+.+.+|||++.++.... .|++|..|.++|||++ +| |++||+|++|||+++.++++.+++.+++.+++
T Consensus 27 ~~~~v~l~k~~~~glG~~l~~g~~~~--~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~ 103 (112)
T 2lob_A 27 GIRKVLLLKEDHEGLGISITGGKEHG--VPILISEIHPGQPADRCGG-LHVGDAILAVNGVNLRDTKHKEAVTILSQQRG 103 (112)
Confidence 46789999988899999999875432 5799999999999999 67 99999999999999999999999999998887
Q ss_pred eEEEEEE
Q psy8436 83 HVEIVIC 89 (306)
Q Consensus 83 ~v~L~v~ 89 (306)
.|+|+|.
T Consensus 104 ~v~l~V~ 110 (112)
T 2lob_A 104 EIEFEVV 110 (112)
Confidence 8888875
No 183
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.57 E-value=1e-14 Score=108.57 Aligned_cols=84 Identities=33% Similarity=0.624 Sum_probs=73.4
Q ss_pred cceEEEEEEeCCCCCcccEEEE-----cCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIV-----GGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIA 293 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~-----gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~ 293 (306)
.+.++|+|.|.. .+|||++. |+.+......|+||..|.++|||+++|+|++||+|++|||+++.++++.+++.
T Consensus 8 ~~~~~v~l~k~~--~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 85 (108)
T 1q7x_A 8 GDIFEVELAKND--NSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVE 85 (108)
T ss_dssp SSEEEEEEESSS--CSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHH
T ss_pred CcEEEEEEEECC--CCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 567899999885 68999999 88776555579999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCceec
Q psy8436 294 MFKDIFPQSSKL 305 (306)
Q Consensus 294 ~Lk~~~~~~~~l 305 (306)
+++.. +..+.|
T Consensus 86 ~~~~~-g~~v~l 96 (108)
T 1q7x_A 86 TLRNT-GQVVHL 96 (108)
T ss_dssp HHHHT-TSEEEE
T ss_pred HHHcC-CCeEEE
Confidence 99985 455544
No 184
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.57 E-value=1.8e-14 Score=111.10 Aligned_cols=83 Identities=22% Similarity=0.304 Sum_probs=68.8
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCC---------CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHH
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSP---------KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAE 290 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~---------~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~e 290 (306)
..++|+|.|.. ..+|||+|.++.+.. ....|+||..|.++|+|+++| |++||+|++|||+++.++++.+
T Consensus 27 ~~r~v~l~r~~-~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~ 104 (132)
T 3l4f_D 27 KEKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 104 (132)
T ss_dssp CCCEEEEECCT-TSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCHHH
T ss_pred CCEEEEEEECC-CCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 44689999865 378999999987631 112379999999999999999 9999999999999999999999
Q ss_pred HHHHHhhcCCCceec
Q psy8436 291 AIAMFKDIFPQSSKL 305 (306)
Q Consensus 291 av~~Lk~~~~~~~~l 305 (306)
++.+|++. +..+.|
T Consensus 105 ~~~~l~~~-g~~v~l 118 (132)
T 3l4f_D 105 VVNMIRQG-GNTLMV 118 (132)
T ss_dssp HHHHHHHT-TTEEEE
T ss_pred HHHHHHcC-CCEEEE
Confidence 99999984 444443
No 185
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.57 E-value=1.6e-14 Score=105.47 Aligned_cols=83 Identities=14% Similarity=0.295 Sum_probs=71.9
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC-
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS- 82 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~- 82 (306)
..+.+.|.+. ..+|||++.++... .|++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+..+.
T Consensus 9 ~~~~~~l~~~-~~g~G~~~~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (98)
T 2jxo_A 9 RPRLCTMKKG-PSGYGFNLHSDKSK---PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (98)
T ss_dssp CCEEEEEECT-TTCCCEEEECCCSS---SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred CcEEEEEEeC-CCcccEEEEecCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 4578889985 56999999877543 489999999999999999 99999999999999999999999999998855
Q ss_pred eEEEEEEeC
Q psy8436 83 HVEIVICRN 91 (306)
Q Consensus 83 ~v~L~v~r~ 91 (306)
.+.|+|.|.
T Consensus 84 ~~~l~v~R~ 92 (98)
T 2jxo_A 84 TKLLVVDRE 92 (98)
T ss_dssp EEEEECCHH
T ss_pred EEEEEEECC
Confidence 456888764
No 186
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.57 E-value=3.5e-14 Score=102.24 Aligned_cols=81 Identities=22% Similarity=0.384 Sum_probs=69.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.++|.|.|..+..+|||++.++.+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.++++.
T Consensus 5 ~~~~~v~l~k~~~~~~~G~~~~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (91)
T 1m5z_A 5 VELHKVTLYKDSGMEDFGFSVADGLLE----KGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDCCLVVPLIAES 79 (91)
T ss_dssp CEEEEEEEECCTTCSSSSEEEEECTTS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred cceEEEEEEECCCCCCccEEEEeccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 567889999986556899999987653 589999999999999999 999999999999999999999999999864
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 80 -g~~v~l 85 (91)
T 1m5z_A 80 -GNKLDL 85 (91)
T ss_dssp -TTEEEE
T ss_pred -CCEEEE
Confidence 444443
No 187
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=2.6e-14 Score=108.46 Aligned_cols=84 Identities=36% Similarity=0.683 Sum_probs=72.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
..++.|.|.|.. .+|||+|.++.+.+. ...|++|..|.++++|+++|+|++||+|++|||+++.+++|.+++.+|+
T Consensus 16 ~~~~~v~l~r~~--~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~ 93 (120)
T 2eno_A 16 VTEEEINLTRGP--SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFR 93 (120)
T ss_dssp EEEEEEEEECCS--SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHH
T ss_pred CceEEEEEEECC--CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 457889999986 789999999877532 2368999999999999999999999999999999999999999999999
Q ss_pred hcCCCceec
Q psy8436 297 DIFPQSSKL 305 (306)
Q Consensus 297 ~~~~~~~~l 305 (306)
+. ...+.|
T Consensus 94 ~~-g~~v~l 101 (120)
T 2eno_A 94 NA-GYAVSL 101 (120)
T ss_dssp HH-CSEEEE
T ss_pred cC-CCeEEE
Confidence 86 344443
No 188
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.57 E-value=9.2e-15 Score=109.73 Aligned_cols=84 Identities=29% Similarity=0.563 Sum_probs=70.9
Q ss_pred cceEEEEEEeCCCCCcccEEEEc---CCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVG---GRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMF 295 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~g---g~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~L 295 (306)
.+.+.|.|.|.. .+|||++.+ +.+......|+||..|.++|||+++|+|++||+|++|||+++.++++.+++.++
T Consensus 3 ~~~~~v~l~k~~--~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~ 80 (113)
T 2g5m_B 3 MELFPVELEKDS--EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVL 80 (113)
T ss_dssp CEEEEEECCCCS--SCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred eEEEEEEEEeCC--CCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356788888874 689999998 555443457999999999999999999999999999999999999999999999
Q ss_pred hhcCCCceec
Q psy8436 296 KDIFPQSSKL 305 (306)
Q Consensus 296 k~~~~~~~~l 305 (306)
+.. +..+.|
T Consensus 81 ~~~-g~~v~l 89 (113)
T 2g5m_B 81 RNT-KGRVRF 89 (113)
T ss_dssp HHS-CSSCEE
T ss_pred hcC-CCeEEE
Confidence 986 454443
No 189
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.57 E-value=8.8e-15 Score=108.13 Aligned_cols=83 Identities=22% Similarity=0.306 Sum_probs=71.3
Q ss_pred cEEEEEEeCCCCceeEEEEecCC-----CCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDG-----GAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN 79 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~-----~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~ 79 (306)
.+.+.|.|..+++|||+|.+... .....+++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+.
T Consensus 16 ~~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 94 (104)
T 2z17_A 16 RKLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIRS 94 (104)
T ss_dssp CCEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHHH
T ss_pred ceEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHHh
Confidence 46778999878899999998421 1122589999999999999999 99999999999999999999999999999
Q ss_pred CCCeEEEEE
Q psy8436 80 KDSHVEIVI 88 (306)
Q Consensus 80 ~~~~v~L~v 88 (306)
.++.|.|+|
T Consensus 95 ~~~~v~l~v 103 (104)
T 2z17_A 95 SGNLLTIET 103 (104)
T ss_dssp TTTEEEEEC
T ss_pred CCCcEEEEE
Confidence 877888775
No 190
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.57 E-value=2.2e-14 Score=104.38 Aligned_cols=80 Identities=26% Similarity=0.406 Sum_probs=67.4
Q ss_pred ceEEEEEEeCCCCCcccEEEEc-------CCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHH
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVG-------GRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAI 292 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~g-------g~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav 292 (306)
..++|.|.|.+. .+|||+|.+ +.+. ..|++|..|.++|||+++| |++||+|++|||+++.+++++++.
T Consensus 4 ~~r~v~l~k~~~-~~~Gf~l~~~g~~~~~~~~~---~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~ 78 (96)
T 2ego_A 4 QRKVLTLEKGDN-QTFGFEIQTYGLHHREEQRV---EMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRHREIV 78 (96)
T ss_dssp CEEEEEEECCTT-CCCSEEEEEEEC-------C---CEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCHHHHH
T ss_pred ccEEEEEEeCCC-CCccEEEEeccccccCCCCC---CCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHH
Confidence 467899999873 689999987 2221 2589999999999999999 999999999999999999999999
Q ss_pred HHHhhcCCCceec
Q psy8436 293 AMFKDIFPQSSKL 305 (306)
Q Consensus 293 ~~Lk~~~~~~~~l 305 (306)
.+|+..+. .+.|
T Consensus 79 ~~l~~~~~-~v~l 90 (96)
T 2ego_A 79 DIIKASGN-VLRL 90 (96)
T ss_dssp HHHHHTTT-EEEE
T ss_pred HHHHhCCC-eEEE
Confidence 99998854 5554
No 191
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.57 E-value=2.5e-14 Score=109.32 Aligned_cols=82 Identities=27% Similarity=0.406 Sum_probs=71.6
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...++|+|.|... .+|||++.++.+.. .+++|..|.++|||+++|+|++||+|++|||+++.+++|++++.+|++.
T Consensus 18 ~~~~~v~l~k~~~-~~lG~~i~gg~~~~---~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~ 93 (125)
T 3hpk_A 18 TVPGKVTLQKDAQ-NLIGISIGGGAQYC---PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 93 (125)
T ss_dssp EEEEEEEEECCTT-SCCCEEEEECSSCC---SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHS
T ss_pred CCCeEEEEEeCCC-CCcCEEEeccCCCC---CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 4567889988864 78999999987642 5899999999999999999999999999999999999999999999997
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
++. +.|
T Consensus 94 ~~~-v~l 99 (125)
T 3hpk_A 94 KGE-VTI 99 (125)
T ss_dssp CSE-EEE
T ss_pred CCe-EEE
Confidence 654 443
No 192
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.57 E-value=2.6e-14 Score=106.32 Aligned_cols=86 Identities=23% Similarity=0.495 Sum_probs=71.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
.+.+.|.|.+..+..+|||++.++.+... ...|++|..|.+++||+++|+|++||+|++|||+++.++++.+++.+|+
T Consensus 11 ~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~ 90 (108)
T 2jre_A 11 FSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLR 90 (108)
T ss_dssp CEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHH
T ss_pred cEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 56778888643335799999998866432 2358999999999999999999999999999999999999999999998
Q ss_pred hcCCCceec
Q psy8436 297 DIFPQSSKL 305 (306)
Q Consensus 297 ~~~~~~~~l 305 (306)
. .+..+.|
T Consensus 91 ~-~g~~v~l 98 (108)
T 2jre_A 91 N-AGNPVRL 98 (108)
T ss_dssp H-HCSEEEE
T ss_pred c-CCCeEEE
Confidence 8 4555443
No 193
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.56 E-value=1.4e-14 Score=105.80 Aligned_cols=83 Identities=31% Similarity=0.473 Sum_probs=70.6
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCC---CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPK---GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~---~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
++.|+|.|.. ..+|||++.++.+... ...|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+|+.
T Consensus 6 ~~~v~l~k~~-~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~ 84 (98)
T 1ihj_A 6 IHMVTLDKTG-KKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE 84 (98)
T ss_dssp EEEEEEECTT-SSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEEEeCC-CCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 5789999954 3799999998876442 12489999999999999998899999999999999999999999999998
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
++..+.|
T Consensus 85 -~g~~v~l 91 (98)
T 1ihj_A 85 -ADFKIEL 91 (98)
T ss_dssp -SCSEEEE
T ss_pred -CCCeEEE
Confidence 5666554
No 194
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.56 E-value=4.6e-14 Score=107.13 Aligned_cols=87 Identities=29% Similarity=0.442 Sum_probs=73.6
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--C
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--D 81 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~ 81 (306)
...|.+.+ ...+|||+|.++.... ...+++|..|.++|||+++|+|++||+|++|||+++.+++++++..+|+.+ +
T Consensus 31 ~~~v~l~~-~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g 109 (121)
T 2kom_A 31 RLNIQLKK-GTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKME 109 (121)
T ss_dssp EEEEEEEC-CTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSS
T ss_pred EEEEEEEc-CCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 45566777 5569999999875321 125799999999999999999999999999999999999999999999985 6
Q ss_pred CeEEEEEEeCC
Q psy8436 82 SHVEIVICRNP 92 (306)
Q Consensus 82 ~~v~L~v~r~~ 92 (306)
..|.|+|.|..
T Consensus 110 ~~v~l~v~R~g 120 (121)
T 2kom_A 110 GTVSLLVFRQE 120 (121)
T ss_dssp CEEEEEEEECC
T ss_pred CEEEEEEEeCC
Confidence 78999998864
No 195
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.56 E-value=3.1e-14 Score=102.10 Aligned_cols=77 Identities=19% Similarity=0.314 Sum_probs=66.2
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
....+....+...+|||.+. .| +|..|.++|||+++| |+.||+|++|||+++.++++.++..+|+.++..
T Consensus 12 ~~~~~i~~~~~~~~lG~~~~--------~G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~ 81 (90)
T 1y7n_A 12 VTTVLIRRPDLRYQLGFSVQ--------NG-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNAVGE 81 (90)
T ss_dssp CEEEEEEESSTTSCCCEEEE--------TT-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHCCEE
T ss_pred cceEEEEeCCCccccCeEec--------CC-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 33444444456779999996 24 899999999999999 999999999999999999999999999988889
Q ss_pred EEEEEEe
Q psy8436 84 VEIVICR 90 (306)
Q Consensus 84 v~L~v~r 90 (306)
|.|+|.+
T Consensus 82 v~l~v~p 88 (90)
T 1y7n_A 82 IHMKTMP 88 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 9999875
No 196
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.56 E-value=3.4e-14 Score=103.74 Aligned_cols=82 Identities=34% Similarity=0.593 Sum_probs=70.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...++|.|.|.. .+|||++.++.+... .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 3 g~~~~v~l~~~~--~~lG~~l~~~~~~~~--~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 78 (98)
T 2opg_A 3 GCETTIEISKGR--TGLGLSIVGGSDTLL--GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQT 78 (98)
T ss_dssp CEEEEEEEECBT--TBTCEEEEECTTSTT--CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CCEEEEEEEECC--CcccEEEecCCCCCC--CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456789999884 689999998876532 4899999999999999999999999999999999999999999999876
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+ ..+.|
T Consensus 79 ~-~~v~l 84 (98)
T 2opg_A 79 P-QRVRL 84 (98)
T ss_dssp C-SEEEE
T ss_pred C-CeEEE
Confidence 6 44443
No 197
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.56 E-value=3e-14 Score=109.47 Aligned_cols=86 Identities=23% Similarity=0.446 Sum_probs=72.7
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMF 295 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~L 295 (306)
..+.+.|.|.+.. ..+|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||+++.++++++++.+|
T Consensus 13 ~~~~~~v~l~~~~-~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 91 (129)
T 2dmz_A 13 LFETYNVELVRKD-GQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL 91 (129)
T ss_dssp CEEEEEEEECCCT-TCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHH
T ss_pred CCcEEEEEEEeCC-CCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3667889996654 3789999998765433 346899999999999999999999999999999999999999999999
Q ss_pred hhcCCCceec
Q psy8436 296 KDIFPQSSKL 305 (306)
Q Consensus 296 k~~~~~~~~l 305 (306)
+. .+..+.|
T Consensus 92 ~~-~~~~v~l 100 (129)
T 2dmz_A 92 RN-AGQVVHL 100 (129)
T ss_dssp HH-CCSSEEE
T ss_pred Hc-CCCeEEE
Confidence 98 6666554
No 198
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2.2e-14 Score=103.70 Aligned_cols=80 Identities=31% Similarity=0.585 Sum_probs=68.3
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..++|+|.|.. .+|||++.++.+.. .+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+|+...
T Consensus 5 ~~r~v~l~k~~--~glG~~l~~~~~~~---~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~ 79 (93)
T 2dkr_A 5 SSGVVELPKTD--EGLGFNIMGGKEQN---SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ 79 (93)
T ss_dssp CSCEEEEECCT--TCCCEEEECSSSSS---CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC
T ss_pred CCEEEEEEeCC--CCccEEEecccCCC---CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34579999884 78999999876542 58999999999999999669999999999999999999999999999865
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
. .+.|
T Consensus 80 ~-~v~l 84 (93)
T 2dkr_A 80 G-SVKL 84 (93)
T ss_dssp S-EEEE
T ss_pred C-cEEE
Confidence 3 4443
No 199
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.56 E-value=5.1e-14 Score=104.01 Aligned_cols=80 Identities=34% Similarity=0.653 Sum_probs=69.2
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.|.++ .+|||++.++.+.. .|++|..|.+++||+++| |++||+|++|||+++.++++++++.+|+.
T Consensus 14 ~~~~~v~l~k~~~-~~lG~~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~- 87 (104)
T 1wi2_A 14 FLPRIVTLKKPPG-AQLGFNIRGGKASQ---LGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKT- 87 (104)
T ss_dssp SCCEEEEECCCTT-CCCSEEEECCSSSC---CCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHHH-
T ss_pred CCCEEEEEEeCCC-CCccEEEEcccCCC---CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC-
Confidence 4467899999864 68999999876542 589999999999999999 99999999999999999999999999998
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
...+.|
T Consensus 88 -~~~v~l 93 (104)
T 1wi2_A 88 -AREISM 93 (104)
T ss_dssp -SSSEEE
T ss_pred -CCEEEE
Confidence 444443
No 200
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.56 E-value=1.8e-14 Score=106.74 Aligned_cols=73 Identities=40% Similarity=0.640 Sum_probs=64.0
Q ss_pred CCcccEEEEcCCCCCC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 232 QKSLGFSIVGGRDSPK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 232 ~~~lG~~l~gg~~~~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
..+|||+|.||.+... +..|++|.+|.++|||+++|+|++||+|++|||+++.+++|.+++.+|++... .+.|
T Consensus 12 ~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~-~v~l 86 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSD-FVYL 86 (106)
T ss_dssp CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCS-EEEE
T ss_pred CCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCC-eEEE
Confidence 3789999999998754 34589999999999999999999999999999999999999999999988644 5443
No 201
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.56 E-value=3.4e-14 Score=107.30 Aligned_cols=86 Identities=27% Similarity=0.393 Sum_probs=76.1
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
+.+.|.|.+. ..+|||++.++.. .|++|..|.++|||+++| |++||+|++|||+++.++++.++..+++..++.
T Consensus 19 ~~~~v~l~~~-~~~lG~~~~~~~~----~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~ 92 (117)
T 1uit_A 19 EPRHVKVQKG-SEPLGISIVSGEK----GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQQCDT 92 (117)
T ss_dssp CCEEEEEECS-SCCCCEEEEECTT----SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTSCCSE
T ss_pred CCEEEEEEeC-CCCccEEEEccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4678999985 4799999987754 479999999999999999 999999999999999999999999888888889
Q ss_pred EEEEEEeCCCCC
Q psy8436 84 VEIVICRNPDDA 95 (306)
Q Consensus 84 v~L~v~r~~~~~ 95 (306)
+.|+|.|.....
T Consensus 93 v~l~v~r~~~~~ 104 (117)
T 1uit_A 93 ITILAQYNPHVH 104 (117)
T ss_dssp EEEEECCCSCCC
T ss_pred EEEEEEECCchh
Confidence 999999876544
No 202
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.55 E-value=8e-15 Score=109.68 Aligned_cols=83 Identities=29% Similarity=0.527 Sum_probs=70.0
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCC------CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSP------KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAM 294 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~------~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~ 294 (306)
.+.|.|.|..+ .+|||+|.++.+.. ....|++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+
T Consensus 10 ~~~v~l~k~~~-~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 88 (111)
T 1uju_A 10 LRELCIQKAPG-ERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQL 88 (111)
T ss_dssp SSCEEEECCTT-CCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHH
T ss_pred cEEEEEEECCC-CccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 45688988864 78999999988532 123589999999999999999999999999999999999999999999
Q ss_pred HhhcCCCceec
Q psy8436 295 FKDIFPQSSKL 305 (306)
Q Consensus 295 Lk~~~~~~~~l 305 (306)
|+. ....+.|
T Consensus 89 l~~-~g~~v~l 98 (111)
T 1uju_A 89 LRS-VGDTLTV 98 (111)
T ss_dssp HSS-CSSEEEE
T ss_pred HHc-CCCeEEE
Confidence 988 4455544
No 203
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.55 E-value=3.9e-14 Score=104.02 Aligned_cols=85 Identities=24% Similarity=0.271 Sum_probs=69.1
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|.+.|..+ .+|||++.+.... ....+++|..|.+++||+++|.|++||+|++|||+++.+.++++++.+|+..
T Consensus 8 ~~~~~v~l~k~~g-~~lG~~i~~~~~~-~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 85 (101)
T 2yt7_A 8 DNCREVHLEKRRG-EGLGVALVESGWG-SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRET 85 (101)
T ss_dssp CCCEEEEEECCTT-CCCCEEEEECCCS-SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHT
T ss_pred CceEEEEEEeCCC-CccCEEEEeCCCC-CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 4567899988875 6899999753221 0113699999999999999777999999999999999999999999999986
Q ss_pred -CCCceec
Q psy8436 299 -FPQSSKL 305 (306)
Q Consensus 299 -~~~~~~l 305 (306)
++..+.|
T Consensus 86 ~~g~~v~l 93 (101)
T 2yt7_A 86 KSQTSVTL 93 (101)
T ss_dssp TTSSEEEE
T ss_pred CCCCeEEE
Confidence 5555554
No 204
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.55 E-value=2.6e-14 Score=107.38 Aligned_cols=86 Identities=26% Similarity=0.349 Sum_probs=75.7
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+...++|.+.+....+|||+|.++.... .|++|..|.+++||+++| |+.||+|++|||+++.++++.++..+++..
T Consensus 13 ~~~~~~v~~~~~~~~~lG~~l~~~~~~~--~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~- 88 (114)
T 1x5n_A 13 ENKEKKVFISLVGSRGLGCSISSGPIQK--PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS- 88 (114)
T ss_dssp CCSSEEEEECCCSSCCCCEEEEECCSSS--CSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC-
T ss_pred CCCcEEEEEEEcCCCceeEEEeecCCCC--CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-
Confidence 4456888898888889999999875432 689999999999999999 999999999999999999998999999876
Q ss_pred CeEEEEEEeC
Q psy8436 82 SHVEIVICRN 91 (306)
Q Consensus 82 ~~v~L~v~r~ 91 (306)
..+.|+|.|.
T Consensus 89 ~~v~l~v~r~ 98 (114)
T 1x5n_A 89 RSLTISIVAA 98 (114)
T ss_dssp SSEEEEECSS
T ss_pred CeEEEEEEcC
Confidence 6899999886
No 205
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.55 E-value=2.8e-14 Score=102.00 Aligned_cols=73 Identities=29% Similarity=0.422 Sum_probs=62.9
Q ss_pred EEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCc
Q psy8436 223 TVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQS 302 (306)
Q Consensus 223 ~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~ 302 (306)
.++|.+......|||.+.+ |+||.+|.++|+|+++|+|++||+|++|||+++.+++|++++.+|++.++ .
T Consensus 3 ~v~l~~~~~~~~~G~~~~~---------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~-~ 72 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS---------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRG-K 72 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE---------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTT-E
T ss_pred EEEEEeCCCCCCCCEEEeC---------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-e
Confidence 4666665545789999963 89999999999999999999999999999999999999999999998765 4
Q ss_pred eec
Q psy8436 303 SKL 305 (306)
Q Consensus 303 ~~l 305 (306)
+.|
T Consensus 73 v~L 75 (88)
T 3e17_A 73 LQL 75 (88)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 206
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.55 E-value=6.7e-14 Score=104.63 Aligned_cols=85 Identities=29% Similarity=0.548 Sum_probs=71.8
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.+.+.+.. .+|||++.++.+...+..|++|..|.++|||+++|+|++||+|++|||+++.++++++++.+|+..
T Consensus 10 ~~~~~~~l~~~~--~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 87 (111)
T 2koj_A 10 GKRLNIQLKKGT--EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRST 87 (111)
T ss_dssp CEEEEEEEECBT--TBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CcEEEEEEEECC--CccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 456778888774 689999998776543446899999999999999988999999999999999999999999999987
Q ss_pred C-CCceec
Q psy8436 299 F-PQSSKL 305 (306)
Q Consensus 299 ~-~~~~~l 305 (306)
+ +..+.|
T Consensus 88 ~~g~~v~l 95 (111)
T 2koj_A 88 KMEGTVSL 95 (111)
T ss_dssp CCSSEEEE
T ss_pred CCCCeEEE
Confidence 4 555544
No 207
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=99.55 E-value=6.1e-16 Score=143.08 Aligned_cols=59 Identities=17% Similarity=0.361 Sum_probs=51.3
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+.++ .+...++.. .++.|.|+|.|+..
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~ 346 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGK 346 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSC
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCE
Confidence 489999999999999999 999999999999999965 567777764 47889999998653
No 208
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.55 E-value=4.1e-14 Score=110.00 Aligned_cols=92 Identities=18% Similarity=0.301 Sum_probs=75.7
Q ss_pred ccccEEEEEEeCCC---CceeEEEEecCCC----------CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCC
Q psy8436 2 EKQFKVFRVVKDDS---NELGIYIERQDGG----------AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGL 68 (306)
Q Consensus 2 ~~~~~~v~l~r~~~---~~lG~~i~gg~~~----------~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~ 68 (306)
+..++.|.|.+... .+|||++.++.+. ....|++|..|.++|||+++| |++||+|++|||+++.++
T Consensus 21 ~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~ 99 (139)
T 2vz5_A 21 QSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMV 99 (139)
T ss_dssp -CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTC
T ss_pred CCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCC
Confidence 45678888888532 3799999987431 113689999999999999999 999999999999999999
Q ss_pred CHHHHHHHHhcC-CCeEEEEEEeCCCC
Q psy8436 69 TIQEAREALNNK-DSHVEIVICRNPDD 94 (306)
Q Consensus 69 ~~~~a~~~l~~~-~~~v~L~v~r~~~~ 94 (306)
++.++..+|+.. +..|.|+|.|+...
T Consensus 100 ~~~~~~~~l~~~~g~~v~l~v~R~g~~ 126 (139)
T 2vz5_A 100 THDQARKRLTKRSEEVVRLLVTRQSLQ 126 (139)
T ss_dssp CHHHHHHHHCCTTCSEEEEEEEECC--
T ss_pred CHHHHHHHHHhCCCCEEEEEEEECCEE
Confidence 999999999974 57899999997654
No 209
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.55 E-value=1.7e-14 Score=107.15 Aligned_cols=78 Identities=22% Similarity=0.424 Sum_probs=68.8
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcC-CCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENE-KLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G-~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
...+.|.|.|... .+|||++.++.+.. .+++|..|.++|||+++| +|++||+|++|||+++.+++|.+++.+|+.
T Consensus 16 ~~~~~v~l~~~~~-~~~G~~~~gg~~~~---~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~ 91 (107)
T 3nfk_A 16 DNLVLIRMKPDEN-GRFGFNVKGGYDQK---MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKA 91 (107)
T ss_dssp CCCEEEEECCCTT-SCCCEEEEEEGGGT---EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHC
T ss_pred CCEEEEEEEcCCC-CCCCEEEEccCCCC---CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567889988863 68999999887642 589999999999999999 599999999999999999999999999998
Q ss_pred cCC
Q psy8436 298 IFP 300 (306)
Q Consensus 298 ~~~ 300 (306)
...
T Consensus 92 ~~~ 94 (107)
T 3nfk_A 92 SCE 94 (107)
T ss_dssp GGG
T ss_pred ccc
Confidence 764
No 210
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.55 E-value=6.4e-14 Score=102.09 Aligned_cols=81 Identities=26% Similarity=0.405 Sum_probs=68.2
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...++|.|.+.. .+|||++.++.+. ..+++|..|.+++||+++|+|++||+|++|||+++.++++++++.+|+.
T Consensus 4 ~~~~~v~l~~~~--~~lG~~i~~~~~~---~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~- 77 (97)
T 1n7e_A 4 AIIYTVELKRYG--GPLGITISGTEEP---FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQM- 77 (97)
T ss_dssp CCEEEEEEECTT--SCCCEEEECCSST---TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-
T ss_pred ceEEEEEEEeCC--CCcCEEEEcccCC---CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 446788897773 6799999887643 2589999999999999998899999999999999999999999999984
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
.+..+.|
T Consensus 78 ~g~~v~l 84 (97)
T 1n7e_A 78 AGETVTL 84 (97)
T ss_dssp CCSEEEE
T ss_pred CCCeEEE
Confidence 5555544
No 211
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.54 E-value=6.7e-14 Score=104.78 Aligned_cols=86 Identities=28% Similarity=0.482 Sum_probs=75.9
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCC-CCCCEEEEECCEeCCCCCHHHHHHHHhcC-CC
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRF-HVGDELIKVNDKRLKGLTIQEAREALNNK-DS 82 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L-~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-~~ 82 (306)
+.+|.|.+....+|||.+.+.... .+++|..|.++|||+++| | +.||+|++|||+.+.+++++++..+|+.. +.
T Consensus 2 ~~~v~l~~~~~~glG~~~~~~~~~---~~~~V~~v~~~spA~~aG-ll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~ 77 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKERVSK---PPVIISDLIRGGAAEQSG-LIQAGDIILAVNDRPLVDLSYDSALEVLRGIASE 77 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEECSSS---SCEEEEEECTTSHHHHHT-CCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSS
T ss_pred EEEEEEEcCCCCceeEEEEecCCC---CCEEEEEeCCCChHHHcC-CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 467889887778999999987543 579999999999999999 6 99999999999999999999999999875 57
Q ss_pred eEEEEEEeCCCC
Q psy8436 83 HVEIVICRNPDD 94 (306)
Q Consensus 83 ~v~L~v~r~~~~ 94 (306)
.+.|+|.|....
T Consensus 78 ~v~l~v~R~g~~ 89 (112)
T 1qau_A 78 THVVLILRGPEG 89 (112)
T ss_dssp SEEEEEEECCTT
T ss_pred cEEEEEEeCCcc
Confidence 899999997654
No 212
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.54 E-value=3.8e-14 Score=108.12 Aligned_cols=83 Identities=31% Similarity=0.508 Sum_probs=71.8
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
....+.|.|.|.. .+|||++.++.+.. ..|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 23 ~~~~~~v~l~k~~--~glG~~l~~~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~ 98 (124)
T 2daz_A 23 PGELHIIELEKDK--NGLGLSLAGNKDRS--RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKT 98 (124)
T ss_dssp SSEEEEEEEECCS--SCCCEEEECBSSTT--SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHH
T ss_pred CCceEEEEEEeCC--CccCEEEeccCCCC--cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 3567889999984 68999999887643 2589999999999999999999999999999999999999999999988
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
.+. .+.|
T Consensus 99 ~~~-~v~l 105 (124)
T 2daz_A 99 APS-KVKL 105 (124)
T ss_dssp SCS-EEEE
T ss_pred CCC-eEEE
Confidence 754 4443
No 213
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.54 E-value=1.5e-14 Score=110.07 Aligned_cols=82 Identities=26% Similarity=0.342 Sum_probs=72.6
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--C
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--D 81 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~ 81 (306)
....+.|.+ ...+|||++.+.. .+++|..|.++|||+++|+|++||+|++|||+++.+.+|.+++.+|+.. +
T Consensus 27 ~~~~~~l~k-~~~glG~~i~~~~-----~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G 100 (126)
T 1wif_A 27 KVIQTKLTV-GNLGLGLVVIQNG-----PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIG 100 (126)
T ss_dssp CEEEEEEEC-CTTCCCCCEEEET-----TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSS
T ss_pred ceEEEEEec-CCceEeEEEEcCC-----CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 456778888 4569999998743 4699999999999999999999999999999999999999999999983 6
Q ss_pred CeEEEEEEeC
Q psy8436 82 SHVEIVICRN 91 (306)
Q Consensus 82 ~~v~L~v~r~ 91 (306)
..|.|+|.|+
T Consensus 101 ~~v~l~V~R~ 110 (126)
T 1wif_A 101 TVLQIKAYRG 110 (126)
T ss_dssp CEEEEEEESS
T ss_pred CEEEEEEEEC
Confidence 7899999997
No 214
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.54 E-value=5.2e-14 Score=103.92 Aligned_cols=80 Identities=35% Similarity=0.635 Sum_probs=68.9
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|.|.|.. .+|||++.++.+. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 10 ~~~~~v~l~k~~--~glG~~~~~~~~~----~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 83 (104)
T 3i4w_A 10 REPRRIVIHRGS--TGLGFNIVGGEXG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA 83 (104)
T ss_dssp SSCEEEEEECBT--TBTSEEEEECC-C----CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CccEEEEEEeCC--CccCEEEECCCCC----CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456789999984 6899999988763 4899999999999999999999999999999999999999999999884
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 84 -~~~v~l 89 (104)
T 3i4w_A 84 -GQTVTI 89 (104)
T ss_dssp -CSEEEE
T ss_pred -CCeEEE
Confidence 344443
No 215
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=2.4e-14 Score=107.23 Aligned_cols=88 Identities=15% Similarity=0.360 Sum_probs=74.9
Q ss_pred cccEEEEEEeCCCC--ceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 3 KQFKVFRVVKDDSN--ELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~--~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
+.++.|.|.|.... +|||+|.+.... ...+++|..|.++|||+++| |++||+|++|||+++.+++|.++..+++..
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~-~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 91 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEED-GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQP 91 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEET-TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTSS
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcC-CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 45789999997663 799999875322 11479999999999999999 999999999999999999999999999864
Q ss_pred CCeEEEEEEeCCCC
Q psy8436 81 DSHVEIVICRNPDD 94 (306)
Q Consensus 81 ~~~v~L~v~r~~~~ 94 (306)
.+.|+|.|....
T Consensus 92 --~v~l~v~R~p~~ 103 (114)
T 2d8i_A 92 --SLGLLVRTYPEL 103 (114)
T ss_dssp --EEEEEEEECCCS
T ss_pred --cEEEEEEECCCC
Confidence 899999997644
No 216
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.54 E-value=4.4e-14 Score=105.80 Aligned_cols=81 Identities=36% Similarity=0.685 Sum_probs=69.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+++.|.|.|.. .+|||++.++.+. ..|++|..|.++|+|+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 23 ~~~~~v~l~~~~--~glG~~l~~~~~~---~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 97 (112)
T 2r4h_A 23 MDFYTVELERGA--KGFGFSLRGGREY---NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNG 97 (112)
T ss_dssp CCEEEEEEECBT--TBTSEEEEECGGG---TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CceEEEEEEcCC--CccCEEEeccccC---CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 557889998875 6899999988653 25899999999999999988999999999999999999999999999874
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 98 -g~~v~l 103 (112)
T 2r4h_A 98 -GRRVRL 103 (112)
T ss_dssp -TTEEEE
T ss_pred -CCeEEE
Confidence 444443
No 217
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.54 E-value=3.3e-14 Score=101.67 Aligned_cols=78 Identities=29% Similarity=0.555 Sum_probs=66.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..+.|+| +++ .+|||++.++.+.. .+++|..|.+++||+++| |++||+|++|||.++.++++.+++.+++..
T Consensus 3 ~~~~v~l-~~~--~~~G~~l~~g~~~~---~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~- 74 (88)
T 2uzc_A 3 SNYSVSL-VGP--APWGFRLQGGKDFN---MPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTHLEAQNKIKGC- 74 (88)
T ss_dssp CEEEEEE-ESS--SCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTC-
T ss_pred cEEEEEE-cCC--CcccEEEECcCCCC---CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 4567888 443 68999999877642 589999999999999999 999999999999999999999999999876
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 75 g~~v~l 80 (88)
T 2uzc_A 75 TGSLNM 80 (88)
T ss_dssp CSEEEE
T ss_pred CCeEEE
Confidence 555443
No 218
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.54 E-value=2.5e-14 Score=103.80 Aligned_cols=76 Identities=25% Similarity=0.393 Sum_probs=65.5
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..+.|.|.|.. .+|||.+.++.+. .|++|..|.++|||+++| |++||+|++|||+++.+++|++++.+|+..+
T Consensus 5 ~~r~v~l~~~~--~~~G~~l~~~~~~----~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 77 (95)
T 3r68_A 5 QPRVVVIKKGS--NGYGFYLRAGPEQ----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKGG 77 (95)
T ss_dssp CCEEEEEECBT--TBCSCEEEEC--C----CSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CcEEEEEecCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 35678998874 6899999887653 489999999999999999 9999999999999999999999999999865
Q ss_pred CCc
Q psy8436 300 PQS 302 (306)
Q Consensus 300 ~~~ 302 (306)
...
T Consensus 78 ~~~ 80 (95)
T 3r68_A 78 DQT 80 (95)
T ss_dssp TEE
T ss_pred CeE
Confidence 443
No 219
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=6e-15 Score=107.37 Aligned_cols=81 Identities=20% Similarity=0.405 Sum_probs=72.2
Q ss_pred ccEEEEEEeCCCC-ceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 4 QFKVFRVVKDDSN-ELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 4 ~~~~v~l~r~~~~-~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
..++|.|.|++.. +|||.+.+. .+++|..|.++|||+ +| |+.||+|++|||+++.+++|.++..+++.+++
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~~------~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~ 79 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISES------LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILREAED 79 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCSS------SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHHCSS
T ss_pred ccEEEEEEECCCCCcccEEEecC------CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 3578999997644 899999762 579999999999995 77 99999999999999999999999999998889
Q ss_pred eEEEEEEeCC
Q psy8436 83 HVEIVICRNP 92 (306)
Q Consensus 83 ~v~L~v~r~~ 92 (306)
.|.|+|.|+.
T Consensus 80 ~v~l~v~R~~ 89 (96)
T 2edv_A 80 SLSITVVRCT 89 (96)
T ss_dssp CEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 9999999975
No 220
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=2.5e-13 Score=104.16 Aligned_cols=88 Identities=22% Similarity=0.334 Sum_probs=74.9
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
..+++.+......+|||++.++.... .|++|..|.++|||+++| |++||+|++|||+.+.++++.+++..++.. ..
T Consensus 20 ~~~~v~v~~~~~~~lG~~~~~~~~~~--~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~ 95 (128)
T 1uf1_A 20 DEKKVNLVLGDGRSLGLTIRGGAEYG--LGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS-RH 95 (128)
T ss_dssp SEEEEEEECCSSCCCCEEEECCTTTT--CCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC-SE
T ss_pred cEEEEEEEECCCCccCEEEECcccCC--CCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC-Ce
Confidence 34677777765678999999864332 489999999999999999 999999999999999999999999999875 68
Q ss_pred EEEEEEeCCCCC
Q psy8436 84 VEIVICRNPDDA 95 (306)
Q Consensus 84 v~L~v~r~~~~~ 95 (306)
+.|+|.|.....
T Consensus 96 v~l~v~R~g~~~ 107 (128)
T 1uf1_A 96 LILTVKDVGRLP 107 (128)
T ss_dssp EEEEEECCSCCS
T ss_pred EEEEEEECCccc
Confidence 999999976554
No 221
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=6.9e-14 Score=105.05 Aligned_cols=84 Identities=26% Similarity=0.449 Sum_probs=69.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCC----CcEEEEEEcCCChhhh-cCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGN----LGIFVKTIFQSGQAAE-NEKLREGDEIIAINGVPLENKTHAEAIA 293 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~----~gi~V~~V~~~g~A~~-~G~L~~GD~Il~VNG~~v~~~~~~eav~ 293 (306)
...+.|.|.|... .+|||+|.++.+..... .+++|..|.+++||++ +| |++||+|++|||+++.+++|++++.
T Consensus 9 ~~~~~v~l~~~~~-~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~~v~~~~~~~~~~ 86 (114)
T 1uew_A 9 LQTSDVVIHRKEN-EGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQSIINMPHADIVK 86 (114)
T ss_dssp CCCEEEEEECCTT-SCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTBCTTTSCHHHHHH
T ss_pred ccceEEEEEECCC-CCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 4567899988753 78999999886653221 2679999999999999 66 9999999999999999999999999
Q ss_pred HHhhcCCCceec
Q psy8436 294 MFKDIFPQSSKL 305 (306)
Q Consensus 294 ~Lk~~~~~~~~l 305 (306)
+|++ .+..+.|
T Consensus 87 ~l~~-~g~~v~l 97 (114)
T 1uew_A 87 LIKD-AGLSVTL 97 (114)
T ss_dssp HHHH-TTTEEEE
T ss_pred HHHc-CCCeEEE
Confidence 9998 5555544
No 222
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=7.5e-14 Score=105.35 Aligned_cols=83 Identities=23% Similarity=0.349 Sum_probs=69.9
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|.|.|..+ .+|||++.++.+.. ..++||..|.++|+|+++|+|++||+|++|||+++.+++|++++.+|++
T Consensus 14 ~~~~~v~l~k~~~-~~lG~~i~~~~~~~--~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~- 89 (117)
T 1v62_A 14 SGPLMVEIVKTPG-SALGISLTTTSLRN--KSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS- 89 (117)
T ss_dssp SSSEEEEEECCTT-CCCCCEEEEECCSS--SCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-
T ss_pred CCcEEEEEEcCCC-CcccEEEEccCCCC--CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-
Confidence 3467899999864 68999998876532 1359999999999999999999999999999999999999999999995
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
.+..+.|
T Consensus 90 ~g~~v~l 96 (117)
T 1v62_A 90 ISEKVRL 96 (117)
T ss_dssp CSSEEEE
T ss_pred CCCeEEE
Confidence 4555544
No 223
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.53 E-value=5.3e-14 Score=100.40 Aligned_cols=76 Identities=36% Similarity=0.515 Sum_probs=64.2
Q ss_pred EEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCce
Q psy8436 224 VTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSS 303 (306)
Q Consensus 224 v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~ 303 (306)
+++.+.. ..+|||++.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+..+ ..+
T Consensus 4 ~~v~~~~-~~~lG~~l~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v 77 (87)
T 2pa1_A 4 LTVDVAG-PAPWGFRITGGRDFH---TPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPL 77 (87)
T ss_dssp EEEEECS-SSCCSEEEEEEGGGT---EEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSE
T ss_pred EEEEECC-CCccCEEEecccCCC---CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeE
Confidence 3444433 368999999887642 589999999999999998 9999999999999999999999999999987 665
Q ss_pred ec
Q psy8436 304 KL 305 (306)
Q Consensus 304 ~l 305 (306)
.|
T Consensus 78 ~l 79 (87)
T 2pa1_A 78 RL 79 (87)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 224
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.53 E-value=1.5e-14 Score=104.19 Aligned_cols=78 Identities=23% Similarity=0.350 Sum_probs=67.2
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.+++|.|.|.+ .+|||++.+..+. .|++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+..
T Consensus 3 ~pr~v~l~k~~--~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 74 (91)
T 2vsp_A 3 KPKLCRLAKGE--NGYGFHLNAIRGL----PGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPYEKVVDRIQSS- 74 (91)
T ss_dssp CEEEEEEECBT--TBTSCCCBCCTTC----SCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHTTS-
T ss_pred CcEEEEEEeCC--CcccEEEEeccCC----CCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 46789999986 4899999876543 589999999999999999 999999999999999999999999999987
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 75 g~~v~l 80 (91)
T 2vsp_A 75 GKNVTL 80 (91)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 666554
No 225
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=2.3e-14 Score=108.54 Aligned_cols=78 Identities=22% Similarity=0.430 Sum_probs=68.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhc-CCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAEN-EKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~-G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
...++|.|.|... .+|||++.++.+.. .|++|..|.++|||+++ |+|++||+|++|||+++.+++|.+++.+|+.
T Consensus 14 ~~~~~v~l~k~~~-~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~ 89 (119)
T 2cs5_A 14 DNLVLIRMKPDEN-GRFGFNVKGGYDQK---MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKA 89 (119)
T ss_dssp SCCEEEEECCCSS-SCCSEEEEEEGGGT---EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHH
T ss_pred CCeEEEEEEeCCC-CCcCEEEecccCCC---CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4567899998763 67999999887642 58999999999999999 4499999999999999999999999999998
Q ss_pred cCC
Q psy8436 298 IFP 300 (306)
Q Consensus 298 ~~~ 300 (306)
.+.
T Consensus 90 ~~~ 92 (119)
T 2cs5_A 90 SCE 92 (119)
T ss_dssp HHH
T ss_pred ccc
Confidence 754
No 226
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.53 E-value=4.2e-14 Score=106.78 Aligned_cols=83 Identities=29% Similarity=0.609 Sum_probs=70.1
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC---CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK---GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMF 295 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~---~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~L 295 (306)
.+.+.|.|.|.+. .+|||+|.++.+.+. +..|++|..|.++|+|+ +| |++||+|++|||+++.+++|.+++.+|
T Consensus 13 ~~~~~v~l~k~~~-~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~~v~~~~~~~~~~~l 89 (117)
T 2csj_A 13 WEQYTVTLQKDSK-RGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGTPMEDVLHSFAVQQL 89 (117)
T ss_dssp EEEEEEEEECCSS-STTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSCBCBTCCHHHHHHHH
T ss_pred ceEEEEEEEECCC-CccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 5678899998863 789999999887543 34689999999999996 55 999999999999999999999999999
Q ss_pred hhcCCCceec
Q psy8436 296 KDIFPQSSKL 305 (306)
Q Consensus 296 k~~~~~~~~l 305 (306)
++. +..+.|
T Consensus 90 ~~~-~~~v~l 98 (117)
T 2csj_A 90 RKS-GKIAAI 98 (117)
T ss_dssp HHS-CSEEEE
T ss_pred hcC-CCeEEE
Confidence 984 455544
No 227
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.53 E-value=2e-14 Score=122.86 Aligned_cols=87 Identities=36% Similarity=0.528 Sum_probs=73.2
Q ss_pred CCCCccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 214 PKSLSLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIA 293 (306)
Q Consensus 214 ~~~~~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~ 293 (306)
|.......+.|.|.|..+ .+|||+|.|+.+.. .|+||..|.++|||+++++|++||+|++|||+++.+++|.+++.
T Consensus 71 p~~~~~~~r~V~L~k~~~-~glGf~I~gg~d~~---~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~ 146 (263)
T 1z87_A 71 PEALLLQRRRVTVRKADA-GGLGISIKGGRENK---MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQ 146 (263)
T ss_dssp CCTTSCSSEEECCCTTTT-CCCCCEEEEETTTT---EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHH
T ss_pred CCcCCCccEEEEEEeCCC-CCEeEEEeeccCCC---CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHH
Confidence 334456788999999864 78999999987642 68999999999999996559999999999999999999999999
Q ss_pred HHhhcCCCceec
Q psy8436 294 MFKDIFPQSSKL 305 (306)
Q Consensus 294 ~Lk~~~~~~~~l 305 (306)
+|++.. +.+.|
T Consensus 147 ~l~~~g-~~V~L 157 (263)
T 1z87_A 147 ALKKTG-KEVVL 157 (263)
T ss_dssp HHHHCC-SCCCE
T ss_pred HHhcCC-CeEEE
Confidence 999974 44443
No 228
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.53 E-value=1e-13 Score=103.59 Aligned_cols=79 Identities=28% Similarity=0.516 Sum_probs=68.3
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.+.. .+|||.+.++.+ .|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+|+..
T Consensus 14 ~~~~~v~l~~~~--~~lG~~l~~~~~-----~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 86 (111)
T 2dlu_A 14 GHVEEVELINDG--SGLGFGIVGGKT-----SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC 86 (111)
T ss_dssp SEEEEEEEECCS--SCCCEEEECCSS-----SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH
T ss_pred CceEEEEEEeCC--CccCEEEeccCC-----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 356788998874 689999998765 5899999999999999999999999999999999999999999999875
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 87 -g~~v~l 92 (111)
T 2dlu_A 87 -GNSVRM 92 (111)
T ss_dssp -CSEEEE
T ss_pred -CCeEEE
Confidence 344443
No 229
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.53 E-value=1e-13 Score=101.19 Aligned_cols=79 Identities=25% Similarity=0.459 Sum_probs=68.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..+.+.+.+.. .+|||.+.++.+. .|++|..|.++|||+++| |++||+|++|||+++.+++++++..+|+..+
T Consensus 9 ~~~~~~l~~~~--~g~G~~~~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 81 (98)
T 2jxo_A 9 RPRLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (98)
T ss_dssp CCEEEEEECTT--TCCCEEEECCCSS----SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CcEEEEEEeCC--CcccEEEEecCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 34678888875 6899999887643 489999999999999999 9999999999999999999999999999986
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 82 ~~~~~l 87 (98)
T 2jxo_A 82 DETKLL 87 (98)
T ss_dssp TEEEEE
T ss_pred CcEEEE
Confidence 554433
No 230
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.53 E-value=8.4e-14 Score=100.37 Aligned_cols=83 Identities=22% Similarity=0.413 Sum_probs=70.3
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
++++...+..+....|||.+. .|++|..|.++|||+++|+|+.||+|++|||+++.++++.++..+|+.++.
T Consensus 2 ~~~~v~~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 73 (92)
T 3cyy_A 2 KPTKVTLVKSAKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG 73 (92)
T ss_dssp CCEEEEEECSSTTSCCCEEEE--------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT
T ss_pred CcEEEEEEeCCCCCCCCEEEe--------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 445555555556679999987 469999999999999999999999999999999999999999999998878
Q ss_pred eEEEEEEeCCC
Q psy8436 83 HVEIVICRNPD 93 (306)
Q Consensus 83 ~v~L~v~r~~~ 93 (306)
.+.|+|.|...
T Consensus 74 ~v~l~v~r~g~ 84 (92)
T 3cyy_A 74 KLKMVVQRDER 84 (92)
T ss_dssp EEEEEEEC---
T ss_pred cEEEEEEeCCc
Confidence 99999998654
No 231
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.52 E-value=6.1e-14 Score=104.10 Aligned_cols=76 Identities=29% Similarity=0.395 Sum_probs=63.1
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.++|.|.|++ .+|||+|.++. .|.+|..|.+ +|.. ++|++||+|++|||+++.+++|.|++++|++.
T Consensus 11 ~~~~~V~L~Kg~--~G~GFsI~~~~------~g~~V~~I~~--~~~~-aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~ 79 (113)
T 3soe_A 11 GLLVTIPLIKGP--KGFGFAIADSP------TGQKVKMILD--SQWC-QGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQF 79 (113)
T ss_dssp CEEEEEEEECBT--TBSSEEEEEET------TEEEEEEESC--GGGS-TTCCTTCEEEEETTEECTTSCHHHHHHHHHHS
T ss_pred CCEEEEEEEECC--CcccEEEeCCC------CCcEEEEecC--hHHh-CCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 567899999985 69999997654 3788999988 4554 45999999999999999999999999999998
Q ss_pred CC-Cceec
Q psy8436 299 FP-QSSKL 305 (306)
Q Consensus 299 ~~-~~~~l 305 (306)
+. ..+.|
T Consensus 80 ~~G~~v~L 87 (113)
T 3soe_A 80 PVGADVPL 87 (113)
T ss_dssp CTTCEEEE
T ss_pred CCCCEEEE
Confidence 74 44444
No 232
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.52 E-value=3.7e-14 Score=101.62 Aligned_cols=77 Identities=23% Similarity=0.388 Sum_probs=64.6
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..++|++... .+|||++.++.+.. .|++|..|.+++||+++| |++||+|++|||+++.++++.+++.++++.
T Consensus 3 ~~~~v~~~~~---~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~- 74 (89)
T 2q3g_A 3 DSFKVVLEGP---APWGFRLQGGKDFN---VPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTHIEAQNKIRAC- 74 (89)
T ss_dssp EEEEEEEESS---SCCCEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHTC-
T ss_pred cEEEEEEcCC---CcccEEEECcCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-
Confidence 4556777643 68999999877642 589999999999999999 999999999999999999999999999876
Q ss_pred CCcee
Q psy8436 300 PQSSK 304 (306)
Q Consensus 300 ~~~~~ 304 (306)
+..+.
T Consensus 75 g~~v~ 79 (89)
T 2q3g_A 75 GERLS 79 (89)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 44443
No 233
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.52 E-value=7.5e-14 Score=101.50 Aligned_cols=81 Identities=21% Similarity=0.380 Sum_probs=67.7
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.++.|.|.|.. .+|||++.+..+.. +..|++|..|.++|||+++| |++||+|++|||+++.++++++++.+|+..
T Consensus 3 ~~r~v~l~k~~--~~~G~~l~~~~~~~-~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 77 (96)
T 2v90_A 3 KPRCLHLEKGP--QGFGFLLREEKGLD-GRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGHEETVSRIQGQ- 77 (96)
T ss_dssp CCEEEEEECBT--TBSCEEEEEEECTT-SCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHTT-
T ss_pred CCEEEEEEeCC--CcccEEEEeccCCC-CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 45789999985 58999998743221 12589999999999999999 999999999999999999999999999985
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 78 g~~v~l 83 (96)
T 2v90_A 78 GSCVSL 83 (96)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 555544
No 234
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.52 E-value=2.1e-14 Score=105.29 Aligned_cols=81 Identities=16% Similarity=0.329 Sum_probs=71.3
Q ss_pred ccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCe
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSH 83 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~ 83 (306)
+...+.|.+. ..+|||.+.+. .+++|..|.++|||+++| |+.||+|++|||+++.++++.++..+++..++.
T Consensus 15 ~~~~v~l~~~-~~g~G~~~~~~------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 86 (100)
T 1whd_A 15 EKLQITIRRG-KDGFGFTICCD------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCPSE 86 (100)
T ss_dssp EEEEEEEECC-SSSSSCBCCCS------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHCSSE
T ss_pred ceEEEEEECC-CCeeeEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 4456778774 46899999754 469999999999999999 999999999999999999999999999988888
Q ss_pred EEEEEEeCC
Q psy8436 84 VEIVICRNP 92 (306)
Q Consensus 84 v~L~v~r~~ 92 (306)
|.|+|.|..
T Consensus 87 v~l~v~R~~ 95 (100)
T 1whd_A 87 IILLVWRVS 95 (100)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 999999864
No 235
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.51 E-value=1.5e-13 Score=104.76 Aligned_cols=82 Identities=18% Similarity=0.372 Sum_probs=70.2
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCC
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDS 82 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~ 82 (306)
++.+.+.+ +.+|||.+.++.. .|++|..|.++|||+++| |+.||+|++|||+++.+++++++..+|+. .+.
T Consensus 30 ~~~~~~~~--~~~lG~~l~~~~~----~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~ 102 (124)
T 3tsv_A 30 MKLVKFRK--GDSVGLRLAGGND----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 102 (124)
T ss_dssp CEEEEEEC--SSCCCEEEEECTT----SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTC
T ss_pred eEEEEcCC--CCceeEEEecCCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCC
Confidence 44444444 5799999998654 479999999999999999 99999999999999999999999998884 678
Q ss_pred eEEEEEEeCCC
Q psy8436 83 HVEIVICRNPD 93 (306)
Q Consensus 83 ~v~L~v~r~~~ 93 (306)
.+.|+|.|...
T Consensus 103 ~v~l~v~R~~~ 113 (124)
T 3tsv_A 103 EVTILAQKKKD 113 (124)
T ss_dssp EEEEEEEECHH
T ss_pred EEEEEEEECCc
Confidence 89999998754
No 236
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.51 E-value=3.1e-13 Score=100.81 Aligned_cols=85 Identities=29% Similarity=0.552 Sum_probs=71.1
Q ss_pred CccceEEEEEEeCCCCCcccEEEEcCCCCCC---CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 217 LSLSMFTVTFQKGPGQKSLGFSIVGGRDSPK---GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIA 293 (306)
Q Consensus 217 ~~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~---~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~ 293 (306)
...+.+.+.+.+.. .+|||++.++.+... ...|++|..|.+++||+++| |++||+|++|||+++.++++.+++.
T Consensus 12 ~~~~~~~~~l~~~~--~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~ 88 (110)
T 1x5q_A 12 IEEEELTLTILRQT--GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVE 88 (110)
T ss_dssp CCCEEEEEEEECSS--SSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCcceEEEEEecCC--CeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHH
Confidence 34566788888874 789999998876421 24689999999999999999 9999999999999999999999999
Q ss_pred HHhhcCCCceec
Q psy8436 294 MFKDIFPQSSKL 305 (306)
Q Consensus 294 ~Lk~~~~~~~~l 305 (306)
.++. ++..+.|
T Consensus 89 ~~~~-~g~~v~l 99 (110)
T 1x5q_A 89 ALRG-AGTAVQM 99 (110)
T ss_dssp HHHS-CCSEEEE
T ss_pred HhhC-CCCeEEE
Confidence 8887 5565554
No 237
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.51 E-value=5e-14 Score=106.44 Aligned_cols=80 Identities=31% Similarity=0.449 Sum_probs=66.4
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC-
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF- 299 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~- 299 (306)
.+.+.+.+. .+|||+|.|+.+... .+++|..|.++|||+++|+|++||+|++|||+++.+++|++++.+|++..
T Consensus 19 ~~~~~~~~~---~glG~~i~gg~~~~~--~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~ 93 (118)
T 1v6b_A 19 VRLLRIKKE---GSLDLALEGGVDSPV--GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWN 93 (118)
T ss_dssp EEEEEEESC---SCCCCEEEEBTTSSS--CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHH
T ss_pred EEEEEECCC---CccCEEEEcccCCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhh
Confidence 455666665 479999999887643 35999999999999999669999999999999999999999999998763
Q ss_pred --CCceec
Q psy8436 300 --PQSSKL 305 (306)
Q Consensus 300 --~~~~~l 305 (306)
+..+.|
T Consensus 94 ~~g~~v~l 101 (118)
T 1v6b_A 94 QGGDWIDL 101 (118)
T ss_dssp HTCSEEEE
T ss_pred cCCCeEEE
Confidence 455544
No 238
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.51 E-value=2.5e-13 Score=101.78 Aligned_cols=79 Identities=23% Similarity=0.409 Sum_probs=67.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|.|.|... .+|||.+.+.. .|++|..|.++|||+++|.|++||+|++|||+++.++++++++.+|+..
T Consensus 24 ~~~~~v~l~k~~~-~~lG~~i~~~~------~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 96 (113)
T 1va8_A 24 ETVKIVRIEKARD-IPLGATVRNEM------DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM 96 (113)
T ss_dssp EECEEEEEEECTT-CCCCEEEEECS------SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CceEEEEEEeCCC-CceeEEEEeCC------CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3567899999963 58999998763 5899999999999999994499999999999999999999999999876
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+. .+.|
T Consensus 97 ~~-~v~l 102 (113)
T 1va8_A 97 HG-TLTF 102 (113)
T ss_dssp CE-EEEE
T ss_pred CC-eEEE
Confidence 63 4443
No 239
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.51 E-value=2.1e-13 Score=103.43 Aligned_cols=85 Identities=29% Similarity=0.540 Sum_probs=71.6
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.+.+.+.. .+|||++.++.+...+..|++|..|.++|||+++|+|++||+|++|||+++.++++++++.+|+..
T Consensus 29 ~~~~~v~l~~~~--~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~ 106 (121)
T 2kom_A 29 GKRLNIQLKKGT--EGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRST 106 (121)
T ss_dssp CEEEEEEEECCT--TCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHC
T ss_pred CeEEEEEEEcCC--CcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 456678887774 689999998776543446899999999999999988999999999999999999999999999987
Q ss_pred C-CCceec
Q psy8436 299 F-PQSSKL 305 (306)
Q Consensus 299 ~-~~~~~l 305 (306)
+ +..+.|
T Consensus 107 ~~g~~v~l 114 (121)
T 2kom_A 107 KMEGTVSL 114 (121)
T ss_dssp CSSCEEEE
T ss_pred CCCCEEEE
Confidence 5 555544
No 240
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=7.9e-14 Score=102.94 Aligned_cols=83 Identities=28% Similarity=0.481 Sum_probs=70.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.+.. .+|||++.++.+.. +..+++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+|+.
T Consensus 10 ~~~~~v~l~~~~--~g~G~~l~~~~~~~-~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~- 85 (104)
T 2djt_A 10 SGHFSVELVRGY--AGFGLTLGGGRDVA-GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA- 85 (104)
T ss_dssp CCCEEEEEECCS--SSCCEEEECCEETT-EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH-
T ss_pred CceEEEEEEeCC--CCccEEEEeccCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 456789999885 68999999876531 12589999999999999998899999999999999999999999999988
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
.+..+.|
T Consensus 86 ~g~~v~l 92 (104)
T 2djt_A 86 GGPQLHL 92 (104)
T ss_dssp TCSEEEE
T ss_pred CCCeEEE
Confidence 4555544
No 241
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.51 E-value=1.6e-13 Score=102.19 Aligned_cols=83 Identities=22% Similarity=0.303 Sum_probs=68.4
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCC---------CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHH
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPK---------GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAE 290 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~---------~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~e 290 (306)
..++|.|.+.. ..+|||+|.++.+... ...|++|..|.++++|+++| |++||+|++|||+++.+++|.+
T Consensus 7 ~~~~v~l~~~~-~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~ 84 (109)
T 1q3o_A 7 KEKTVLLQKKD-SEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGHRQ 84 (109)
T ss_dssp EEEEEEEECCT-TSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHH
T ss_pred CcEEEEEEECC-CCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHH
Confidence 45788998765 4799999998876321 12379999999999999999 9999999999999999999999
Q ss_pred HHHHHhhcCCCceec
Q psy8436 291 AIAMFKDIFPQSSKL 305 (306)
Q Consensus 291 av~~Lk~~~~~~~~l 305 (306)
++.+|+.. +..+.|
T Consensus 85 ~~~~l~~~-~~~v~l 98 (109)
T 1q3o_A 85 VVNMIRQG-GNTLMV 98 (109)
T ss_dssp HHHHHHHT-TTEEEE
T ss_pred HHHHHHhC-CCEEEE
Confidence 99999976 444443
No 242
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.51 E-value=2.4e-13 Score=98.78 Aligned_cols=83 Identities=18% Similarity=0.316 Sum_probs=70.8
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK- 80 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~- 80 (306)
+.+.+++.|.|.. .+|||+|.+.. .|++|..|.++ |+++| |+.||+|++|||+++.+++|++++.+|+.+
T Consensus 8 ~~~~~~v~l~~~~-~g~G~~i~~~~-----~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 78 (96)
T 1ujv_A 8 QAELMTLTIVKGA-QGFGFTIADSP-----TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDCP 78 (96)
T ss_dssp CCCCEEEEEECCS-SSSSEEEEEET-----TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHSC
T ss_pred CceEEEEEEEeCC-CceeEEEEcCC-----CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3567889999954 69999997543 36999999983 67788 999999999999999999999999999985
Q ss_pred -CCeEEEEEEeCCC
Q psy8436 81 -DSHVEIVICRNPD 93 (306)
Q Consensus 81 -~~~v~L~v~r~~~ 93 (306)
+..|.|+|.|...
T Consensus 79 ~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 79 IGSETSLIIHRGSG 92 (96)
T ss_dssp TTSEEEEEEECCSS
T ss_pred CCCEEEEEEEECCC
Confidence 6789999998753
No 243
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.51 E-value=1.4e-13 Score=96.68 Aligned_cols=78 Identities=22% Similarity=0.440 Sum_probs=69.1
Q ss_pred EEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEE
Q psy8436 6 KVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVE 85 (306)
Q Consensus 6 ~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~ 85 (306)
+...+.....+.|||.+. .|++|..|.++|||+++|+|+.||+|++|||+++.++++.++..+++..++.+.
T Consensus 3 ~~~~~~~~~~~~~g~~~~--------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~ 74 (81)
T 2rcz_A 3 KVTLVKSRKNEEYGLRLA--------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLK 74 (81)
T ss_dssp EEEEECCSTTCCCCEEEE--------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEE
T ss_pred EEEEEECCCCCCCCEEEe--------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEE
Confidence 445666777889999987 369999999999999999999999999999999999999999999998877899
Q ss_pred EEEEeC
Q psy8436 86 IVICRN 91 (306)
Q Consensus 86 L~v~r~ 91 (306)
|+|.|.
T Consensus 75 l~v~R~ 80 (81)
T 2rcz_A 75 MVVQRD 80 (81)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 999874
No 244
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.51 E-value=4.2e-14 Score=108.35 Aligned_cols=90 Identities=28% Similarity=0.463 Sum_probs=78.7
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK- 80 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~- 80 (306)
+.+++.|.|.+....+|||++.+.... .+++|..|.++|||+++|.|+.||+|++|||+++.+++++++..+|+..
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~~~~~---~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 82 (127)
T 1b8q_A 6 EPNVISVRLFKRKVGGLGFLVKERVSK---PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIA 82 (127)
T ss_dssp CCCSEEEEEECTTTSCCSCCEEECTTS---SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCC
T ss_pred CCceEEEEEEeCCCCcEeEEEEecCCC---CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 567889999997778999999987542 5799999999999999993399999999999999999999999999875
Q ss_pred CCeEEEEEEeCCCC
Q psy8436 81 DSHVEIVICRNPDD 94 (306)
Q Consensus 81 ~~~v~L~v~r~~~~ 94 (306)
+..+.|+|.|....
T Consensus 83 g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 83 SETHVVLILRGPEG 96 (127)
T ss_dssp SSCEEEEEECCCCS
T ss_pred CCeEEEEEEeCCce
Confidence 56899999997654
No 245
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.50 E-value=1.4e-13 Score=99.01 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=64.2
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.+++|.|.|+. .+|||.+.+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+...
T Consensus 3 ~~r~v~l~~~~--~g~G~~l~~~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~ 72 (91)
T 2f5y_A 3 RYRQITIPRGK--DGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSCP 72 (91)
T ss_dssp EEEEEEEECBT--TBTSEEEECS-------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCS
T ss_pred ceEEEEEEeCC--CCccEEEecC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 46789999885 6899999763 379999999999999999 9999999999999999999999999998754
Q ss_pred CCcee
Q psy8436 300 PQSSK 304 (306)
Q Consensus 300 ~~~~~ 304 (306)
. .+.
T Consensus 73 ~-~v~ 76 (91)
T 2f5y_A 73 S-EII 76 (91)
T ss_dssp S-EEE
T ss_pred C-eEE
Confidence 3 443
No 246
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.50 E-value=6.9e-14 Score=99.28 Aligned_cols=77 Identities=30% Similarity=0.469 Sum_probs=64.1
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
.+.|+|.+. .+|||++.++.+.. .|++|..|.++|||+++| |++||+|++|||.++.++++.+++.+++....
T Consensus 2 ~~~v~l~~~---~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~ 74 (85)
T 1rgw_A 2 AYSVTLTGP---GPWGFRLQGGKDFN---MPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTHLEAQNKIKSASY 74 (85)
T ss_dssp EEEEEECCS---SCCCEEECCCGGGT---SCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCHHHHHHHHTTCSS
T ss_pred cEEEEEeCC---CccCEEEEeccCCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHcCCC
Confidence 356777432 67999999887643 589999999999999988 99999999999999999999999999987543
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
.+.|
T Consensus 75 -~v~l 78 (85)
T 1rgw_A 75 -NLSL 78 (85)
T ss_dssp -CEEE
T ss_pred -eEEE
Confidence 3443
No 247
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=6.9e-15 Score=112.60 Aligned_cols=88 Identities=19% Similarity=0.379 Sum_probs=74.5
Q ss_pred ccEEEEEEeCCCCceeEEEEecC-------------------CC-------CcCCCeEEEEeCCCChhcccCCCCCCCEE
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQD-------------------GG-------AHFSPYLISHIEPGGAIHRDGRFHVGDEL 57 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~-------------------~~-------~~~~gi~V~~V~~gs~A~~~G~L~~GD~I 57 (306)
..|+|.|.|.. .+|||+|.+.. .+ ....+++|..|.++|||+++| |++||+|
T Consensus 8 ~~r~v~l~r~~-~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 8 GPKTVTLKRTS-QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp SCCCEEEECCS-SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CCEEEEEEECC-CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 45789999954 68999997520 00 012469999999999999999 9999999
Q ss_pred EEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Q psy8436 58 IKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 58 l~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
++|||+++.++++++++.+|+.++..|.|+|.|...
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred EEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 999999999999999999999998999999988654
No 248
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.50 E-value=1.3e-13 Score=113.59 Aligned_cols=74 Identities=26% Similarity=0.426 Sum_probs=66.9
Q ss_pred CCceeEEEEecCCC------CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEE
Q psy8436 15 SNELGIYIERQDGG------AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVI 88 (306)
Q Consensus 15 ~~~lG~~i~gg~~~------~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v 88 (306)
+.+|||+|.|+.++ ....|++|..|.++|||++ | |+.||+|++|||+++.+++|.+++.+++.++..|.|+|
T Consensus 1 ~~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 78 (195)
T 2qbw_A 1 SPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELII 78 (195)
T ss_dssp CCCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEE
T ss_pred CCcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 36899999998542 1236899999999999999 8 99999999999999999999999999999988999999
Q ss_pred Ee
Q psy8436 89 CR 90 (306)
Q Consensus 89 ~r 90 (306)
.|
T Consensus 79 ~r 80 (195)
T 2qbw_A 79 VR 80 (195)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 249
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.50 E-value=9.2e-15 Score=107.83 Aligned_cols=78 Identities=15% Similarity=0.266 Sum_probs=69.6
Q ss_pred CCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Q psy8436 14 DSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 14 ~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
...+|||++.++.+.. .+++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+..+..+.|+|.|...
T Consensus 13 ~~~~lG~~l~~g~~~~--~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 13 GPAPWGFRLSGGIDFN--QPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAET 89 (103)
T ss_dssp SSSCCSBCCEEETTTT--EEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECEECCCTT
T ss_pred CCCCcCEEEeccccCC--CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCe
Confidence 4568999999886432 479999999999999999 9999999999999999999999999999988899999998765
Q ss_pred C
Q psy8436 94 D 94 (306)
Q Consensus 94 ~ 94 (306)
.
T Consensus 90 ~ 90 (103)
T 1v5l_A 90 R 90 (103)
T ss_dssp T
T ss_pred E
Confidence 3
No 250
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.50 E-value=1.6e-13 Score=105.25 Aligned_cols=86 Identities=14% Similarity=0.265 Sum_probs=74.4
Q ss_pred ccccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 2 EKQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 2 ~~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
+...|+|.|.+.. .+|||.+.++... .|++|..|.++|||+++| |+.||+|++|||+++.++++.++..+|+...
T Consensus 7 ~~~~r~v~l~~~~-~g~G~~l~~~~~~---~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~ 81 (128)
T 2kjd_A 7 MLRPRLCTMKKGP-SGYGFNLHSDKSK---PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGG 81 (128)
T ss_dssp TCCCEEEEEECCS-SSCCEEEEECSSS---CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTC
T ss_pred CCCcEEEEEecCC-CcccEEEEecCCC---CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 3457889999954 6899999987643 489999999999999999 9999999999999999999999999999874
Q ss_pred C-eEEEEEEeCC
Q psy8436 82 S-HVEIVICRNP 92 (306)
Q Consensus 82 ~-~v~L~v~r~~ 92 (306)
. .+.|+|.|..
T Consensus 82 ~~~~~l~v~R~g 93 (128)
T 2kjd_A 82 DETKLLVVDRET 93 (128)
T ss_dssp SEEEEEEECHHH
T ss_pred CCEEEEEEEeCC
Confidence 4 5678888754
No 251
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.50 E-value=2.6e-13 Score=98.81 Aligned_cols=82 Identities=30% Similarity=0.571 Sum_probs=68.4
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCC---CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPK---GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~---~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
+.+.+.+.+.. .+|||++.++.+.+. ...|++|..|.++|||+++| |++||+|++|||+++.++++.+++..++
T Consensus 3 ~~~~v~~~~~~--~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~ 79 (97)
T 2w4f_A 3 EELTLTILRQT--GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEHHEAVEALR 79 (97)
T ss_dssp CEEEEEEECBT--TBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred eEEEEEEEeCC--CceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHh
Confidence 45678888873 689999998876432 23689999999999999999 9999999999999999999999988887
Q ss_pred hcCCCceec
Q psy8436 297 DIFPQSSKL 305 (306)
Q Consensus 297 ~~~~~~~~l 305 (306)
. ++..+.|
T Consensus 80 ~-~g~~v~l 87 (97)
T 2w4f_A 80 G-AGTAVQM 87 (97)
T ss_dssp T-SCSEEEE
T ss_pred C-CCCeEEE
Confidence 7 5555554
No 252
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.49 E-value=8e-14 Score=103.19 Aligned_cols=78 Identities=28% Similarity=0.418 Sum_probs=66.0
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
+.++|+|.|..+ .+|||++.+.. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++...
T Consensus 2 ~~~~v~L~k~~~-~glG~~i~~~~------~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~ 74 (106)
T 2la8_A 2 EKFNVDLMKKAG-KELGLSLSPNE------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGAN 74 (106)
T ss_dssp EEEEEEECCBSS-STTCCEEEECS------SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCB
T ss_pred eEEEEEEEeCCC-CccCEEEEeCC------CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCC
Confidence 356788886653 78999998722 58999999999999999999999999999999999999999999998754
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+.+.|
T Consensus 75 -~~v~l 79 (106)
T 2la8_A 75 -GKVSM 79 (106)
T ss_dssp -SCEEE
T ss_pred -CeEEE
Confidence 34543
No 253
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.49 E-value=5.6e-14 Score=107.77 Aligned_cols=86 Identities=23% Similarity=0.310 Sum_probs=70.3
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCC---C---CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSP---K---GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAI 292 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~---~---~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav 292 (306)
..++.|.|.|.+...+|||++.++.+.. . ...|+||..|.++|||+++|.|++||+|++|||+++.+++|++++
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~ 107 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT 107 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH
T ss_pred CccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 4567899998853478999998875421 0 013799999999999999998999999999999999999999999
Q ss_pred HHHhhcCCCceec
Q psy8436 293 AMFKDIFPQSSKL 305 (306)
Q Consensus 293 ~~Lk~~~~~~~~l 305 (306)
.+|+.... .+.|
T Consensus 108 ~~l~~~~~-~v~l 119 (128)
T 1nf3_C 108 DMMIANSR-NLII 119 (128)
T ss_dssp HHHHHTTT-SEEE
T ss_pred HHHHcCCC-eEEE
Confidence 99997654 3544
No 254
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.49 E-value=1.8e-13 Score=104.02 Aligned_cols=87 Identities=23% Similarity=0.315 Sum_probs=72.4
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCC-CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSP-KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~-~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
..+.++|.|.|.. ..+|||+|.++.... ....+++|..|.+++||+++|.|++||+|++|||+++.++++++++.+|+
T Consensus 13 ~~~~~~v~l~k~~-~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 91 (122)
T 1v5q_A 13 HTETTEVVLTADP-VTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLR 91 (122)
T ss_dssp CEEEEEEEECCCS-SSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHH
T ss_pred cceeEEEEEEeCC-CCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3567889998885 378999999873211 12357999999999999999889999999999999999999999999999
Q ss_pred hcC-CCceec
Q psy8436 297 DIF-PQSSKL 305 (306)
Q Consensus 297 ~~~-~~~~~l 305 (306)
..+ ...+.|
T Consensus 92 ~~~~g~~v~l 101 (122)
T 1v5q_A 92 DSSITSKVTL 101 (122)
T ss_dssp HHTTTTCEEE
T ss_pred hCCCCCeEEE
Confidence 987 556654
No 255
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.49 E-value=1.2e-13 Score=99.33 Aligned_cols=77 Identities=30% Similarity=0.372 Sum_probs=65.7
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
.+.|.+... .+|||++.++.+.. .|++|..|.++|||+++| |++||+|++|||+++.++++.++..+|+. ++
T Consensus 4 ~~~v~~~~~---~~~G~~l~~~~~~~---~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g 75 (91)
T 2pkt_A 4 TQQIDLQGP---GPWGFRLVGGKDFE---QPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTHLEAQNRIKG-CT 75 (91)
T ss_dssp EEEEEEESS---SCCSEEEEEEGGGT---EEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHT-CS
T ss_pred cEEEEECCC---CCCCEEEEccCCCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc-CC
Confidence 456777644 57999999876542 589999999999999999 99999999999999999999999999998 66
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
..+.|
T Consensus 76 ~~v~l 80 (91)
T 2pkt_A 76 DNLTL 80 (91)
T ss_dssp SEEEE
T ss_pred CeEEE
Confidence 66554
No 256
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.48 E-value=1.2e-13 Score=102.52 Aligned_cols=76 Identities=22% Similarity=0.260 Sum_probs=66.4
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..+.|.|.|++ .+|||.+.+. .+++|..|.+++||+++| |++||+|++|||.++.++++++++++|+..+
T Consensus 23 ~~r~v~l~k~~--~~~G~~l~~~-------~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~ 92 (109)
T 2vsv_A 23 MPRSIRFTAEE--GDLGFTLRGN-------APVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTLSEVMKLLKSFG 92 (109)
T ss_dssp SCEEEEECCGG--GCCCEEEESS-------SSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHTTT
T ss_pred CCEEEEEEeCC--CceeEEEeCC-------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC
Confidence 45789999874 6899999653 378999999999999998 9999999999999999999999999999887
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 93 ~~~v~l 98 (109)
T 2vsv_A 93 EDEIEM 98 (109)
T ss_dssp TSCEEE
T ss_pred CCeEEE
Confidence 765554
No 257
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=9.2e-14 Score=99.99 Aligned_cols=76 Identities=22% Similarity=0.312 Sum_probs=64.2
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
++.|.|.|..+ .+|||++.+.. .+++|..|.+++||+++|.|++||+|++|||+++ +.++++++.+|++. .
T Consensus 7 ~r~v~l~k~~~-~~lG~~i~~~~------~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~-~ 77 (91)
T 2e7k_A 7 GRMVGIRKTAG-EHLGVTFRVEG------GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNA-S 77 (91)
T ss_dssp SCBCCBCCCTT-CCCCEEEEESS------SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTC-C
T ss_pred cEEEEEEECCC-CcEeEEEEecC------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcC-C
Confidence 45677877653 78999998732 5899999999999999988999999999999999 99999999999985 4
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
+.+.|
T Consensus 78 ~~v~l 82 (91)
T 2e7k_A 78 GSVIL 82 (91)
T ss_dssp SSBCE
T ss_pred CeEEE
Confidence 44443
No 258
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.48 E-value=2.3e-13 Score=113.06 Aligned_cols=85 Identities=20% Similarity=0.300 Sum_probs=74.4
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeE
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHV 84 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v 84 (306)
..++.+.+....+|||++.+.. .|++|..|.++|+|+++|+|+.||+|++|||+++.+++|++++.+++.++..+
T Consensus 114 ~~~v~l~~~~~~~lG~~~~~~~-----~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v 188 (206)
T 3r0h_A 114 KFNVDLMKKAGKELGLSLSPNE-----IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKV 188 (206)
T ss_dssp EEEEEEECCTTCCCCEEEEECS-----SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEE
T ss_pred EEEEEEecCCCCccCeEEEcCC-----ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeE
Confidence 3456666766679999998543 47999999999999999999999999999999999999999999999998899
Q ss_pred EEEEEeCCCC
Q psy8436 85 EIVICRNPDD 94 (306)
Q Consensus 85 ~L~v~r~~~~ 94 (306)
.|+|.|....
T Consensus 189 ~L~V~R~~~~ 198 (206)
T 3r0h_A 189 SMEVTRPKPT 198 (206)
T ss_dssp EEEEEEECCC
T ss_pred EEEEEeCCCC
Confidence 9999996543
No 259
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.48 E-value=1.7e-13 Score=100.77 Aligned_cols=79 Identities=25% Similarity=0.402 Sum_probs=67.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...++|.|.|.. .+|||++.++.+. .|++|..|.++|||+++| |++||+|++|||+++.++++++++.+|++.
T Consensus 5 ~~~r~v~l~k~~--~g~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 77 (102)
T 2d90_A 5 SSGRVVVIKKGS--NGYGFYLRAGPEQ----KGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDHDGVVEMIRKG 77 (102)
T ss_dssp SSSEEEEEECCS--SSSSCEEEECSSS----SSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCHHHHHHHHHHS
T ss_pred CCCEEEEEeeCC--CCccEEEEeecCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 345789999985 6899999886542 589999999999999999 999999999999999999999999999874
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 78 -g~~v~l 83 (102)
T 2d90_A 78 -GDQTTL 83 (102)
T ss_dssp -TTEEEE
T ss_pred -CCEEEE
Confidence 444443
No 260
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.48 E-value=3.4e-13 Score=101.14 Aligned_cols=78 Identities=28% Similarity=0.428 Sum_probs=67.6
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.+... .+|||++.++.+.. .+++|..|.++|||+++|+|++||+|++|||.++.+.++++++.+|+..
T Consensus 23 ~~~~~V~l~~~~~-~~lG~~l~~~~~~~---~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~ 98 (114)
T 2gzv_A 23 MVPGKVTLQKDAQ-NLIGISIGGGAQYC---PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV 98 (114)
T ss_dssp CCCEEEEEECCTT-SCCSEEEEECCC-----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred CCCEEEEEEECCC-CcEeEEEEeCCCCC---CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 3457899998863 67999999877542 4799999999999999999999999999999999999999999999976
Q ss_pred CC
Q psy8436 299 FP 300 (306)
Q Consensus 299 ~~ 300 (306)
++
T Consensus 99 ~~ 100 (114)
T 2gzv_A 99 KG 100 (114)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 261
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.48 E-value=2.8e-13 Score=111.46 Aligned_cols=88 Identities=27% Similarity=0.478 Sum_probs=75.6
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCc---CCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCC
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAH---FSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKD 81 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~---~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~ 81 (306)
..++.+.+.. .+|||++.++..... ..|++|..|.++|||+++|+|++||+|++|||+++.+++|++++.+|+.++
T Consensus 101 ~~~v~l~~~~-~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~ 179 (196)
T 3gsl_A 101 VMEIKLIKGP-KGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTY 179 (196)
T ss_dssp EEEEEEEEBT-TBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCC
T ss_pred cEEEEEecCC-CCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCC
Confidence 4566777754 499999998754321 247999999999999999999999999999999999999999999999998
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
..+.|+|.|+..
T Consensus 180 ~~v~l~v~R~~~ 191 (196)
T 3gsl_A 180 DVVYLKVAKPSN 191 (196)
T ss_dssp EEEEEEEEEESC
T ss_pred CeEEEEEeCCCC
Confidence 899999998654
No 262
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.6e-13 Score=99.32 Aligned_cols=79 Identities=33% Similarity=0.367 Sum_probs=66.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|+|.+. .+|||++.++.+.. .+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++.
T Consensus 7 ~~~~~v~l~~~---~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~- 78 (94)
T 2eeg_A 7 GMPHSVTLRGP---SPWGFRLVGGRDFS---APLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTHLEAQNRIKG- 78 (94)
T ss_dssp CCCEEEEECCS---SCCSCCEECCTTTT---SCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCHHHHHHHHHT-
T ss_pred CceEEEEEeCC---CccCEEEECccCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 34567888433 57999999988753 589999999999999998 99999999999999999999999999987
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
....+.|
T Consensus 79 ~g~~v~l 85 (94)
T 2eeg_A 79 CHDHLTL 85 (94)
T ss_dssp CCSCEEE
T ss_pred CCCeEEE
Confidence 4444443
No 263
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.48 E-value=4.9e-13 Score=99.19 Aligned_cols=84 Identities=32% Similarity=0.635 Sum_probs=68.9
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCCC---CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHH
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSPK---GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAM 294 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~---~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~ 294 (306)
..+.++|.|.|.+. .+|||++.++.+.+. +..|++|..|.+++||+ +| |++||+|++|||+++.++++.+++..
T Consensus 5 ~~~~~~v~l~k~~~-~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~~~~~~~ 81 (107)
T 2h2b_A 5 IWEQHTVTLHRAPG-FGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEHAFAVQQ 81 (107)
T ss_dssp CEEEEEEEEECBTT-TBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred cceeEEEEEEeCCC-CccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccHHHHHHH
Confidence 35678999999863 789999998877432 24699999999999999 76 99999999999999999999998888
Q ss_pred HhhcCCCceec
Q psy8436 295 FKDIFPQSSKL 305 (306)
Q Consensus 295 Lk~~~~~~~~l 305 (306)
+++ ++..+.|
T Consensus 82 ~~~-~g~~v~l 91 (107)
T 2h2b_A 82 LRK-SGKNAKI 91 (107)
T ss_dssp HHT-CCSEEEE
T ss_pred hhC-CCCEEEE
Confidence 874 3444443
No 264
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.47 E-value=3.7e-13 Score=99.14 Aligned_cols=84 Identities=31% Similarity=0.533 Sum_probs=66.8
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCC------CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPK------GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIA 293 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~------~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~ 293 (306)
.+++|.|.+... ..|||++.++.+... ...|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.
T Consensus 4 dp~~v~l~~~~~-~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 4 QPRRVELWREPS-KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp SCEEEEECCCC--CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCEEEEEEeCCC-CceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 456788888753 679999988665321 1248999999999999999889999999999999999999999999
Q ss_pred HHhhcCCCceec
Q psy8436 294 MFKDIFPQSSKL 305 (306)
Q Consensus 294 ~Lk~~~~~~~~l 305 (306)
+|+..++ .+.|
T Consensus 83 ~l~~~~~-~v~l 93 (103)
T 2fcf_A 83 AIRKAGN-PVVF 93 (103)
T ss_dssp HHHTCCS-SEEE
T ss_pred HHHhCCC-cEEE
Confidence 9998754 5544
No 265
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.47 E-value=2.1e-13 Score=100.98 Aligned_cols=78 Identities=24% Similarity=0.418 Sum_probs=66.9
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
++.|.|.|.++ ..|||.+....+. .|++|..|.++|||+++| |++||+|++|||+++.+++|.+++.+|++ .+
T Consensus 2 ~r~v~l~~~~~-~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g 74 (106)
T 3ngh_A 2 PRESKLSKQEG-QNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRK-SG 74 (106)
T ss_dssp CEEEEEECCTT-CCCCCEEECCTTC----CSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCHHHHHHHHHH-TT
T ss_pred CEEEEEEeCCC-CeeCEEEEEEeCC----CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 35788988874 6899999877653 589999999999999999 99999999999999999999999999985 44
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
..+.|
T Consensus 75 ~~v~l 79 (106)
T 3ngh_A 75 NSVTL 79 (106)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 45543
No 266
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.47 E-value=2e-13 Score=102.80 Aligned_cols=82 Identities=37% Similarity=0.663 Sum_probs=69.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.+.|.|.+.. .+|||++.++.+... .|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+|+..
T Consensus 16 ~~~~~v~l~~~~--~glG~~l~~~~~~~~--~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 91 (116)
T 2dm8_A 16 GQEMIIEISKGR--SGLGLSIVGGKDTPL--NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT 91 (116)
T ss_dssp TSCEEEEEECCS--SCCCCCCBCCTTSSC--SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC
T ss_pred CCEEEEEEEECC--CcccEEEeCCCCCCc--CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345788888874 689999998776432 4899999999999999999999999999999999999999999999886
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
. ..+.|
T Consensus 92 ~-~~v~l 97 (116)
T 2dm8_A 92 P-QKVRL 97 (116)
T ss_dssp C-SEEEE
T ss_pred C-CeEEE
Confidence 6 54443
No 267
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.47 E-value=2.7e-13 Score=100.01 Aligned_cols=82 Identities=32% Similarity=0.428 Sum_probs=66.5
Q ss_pred EEEEEeCC--CCCcccEEEEcCCCCC---------CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHH
Q psy8436 223 TVTFQKGP--GQKSLGFSIVGGRDSP---------KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEA 291 (306)
Q Consensus 223 ~v~l~k~~--~~~~lG~~l~gg~~~~---------~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~ea 291 (306)
.+++.+.. +..+|||++.|+.+.. ....|++|..|.++|||+++| |++||+|++|||+++.+++|+++
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~ 85 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTHDQA 85 (104)
T ss_dssp EEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHH
T ss_pred EEEEEEccCCCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHH
Confidence 45555432 2236999999877642 124689999999999999999 99999999999999999999999
Q ss_pred HHHHhhcCCCceec
Q psy8436 292 IAMFKDIFPQSSKL 305 (306)
Q Consensus 292 v~~Lk~~~~~~~~l 305 (306)
+.+|++.++..+.|
T Consensus 86 ~~~l~~~~g~~v~l 99 (104)
T 3sfj_A 86 RKRLTKRSEEVVRL 99 (104)
T ss_dssp HHHHTCTTCSEEEE
T ss_pred HHHHHhCCCCEEEE
Confidence 99999877666654
No 268
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.47 E-value=4.8e-13 Score=96.98 Aligned_cols=79 Identities=37% Similarity=0.620 Sum_probs=64.3
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCC---CC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHH
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDS---PK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMF 295 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~---~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~L 295 (306)
.++|.+.+.. +|||+|.++.+. +. ...|++|..|.++|||++ | |++||+|++|||+++.++++.+++.++
T Consensus 4 ~~~v~l~~~~---~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (95)
T 1mfg_A 4 EIRVRVEKDP---ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLL 78 (95)
T ss_dssp EEEEEEECSS---SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBHHHHHHHH
T ss_pred EEEEEECCCC---CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCHHHHHHHh
Confidence 3467777763 699999997742 21 246999999999999999 7 999999999999999999999999999
Q ss_pred hhcCCCceec
Q psy8436 296 KDIFPQSSKL 305 (306)
Q Consensus 296 k~~~~~~~~l 305 (306)
+.. +..+.|
T Consensus 79 ~~~-~~~v~l 87 (95)
T 1mfg_A 79 KTF-QNTVEL 87 (95)
T ss_dssp HHC-CSEEEE
T ss_pred hcC-CCeEEE
Confidence 854 444443
No 269
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.47 E-value=2.5e-13 Score=98.71 Aligned_cols=79 Identities=29% Similarity=0.430 Sum_probs=66.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+++.|.+... .+|||++.+.. .|++|..|.++|||+++|+|++||+|++|||+++.++++.+++.+++..
T Consensus 7 ~~~~~v~l~~~~~-~glG~~~~~~~------~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~ 79 (96)
T 2qkv_A 7 LEKFNVDLMKKAG-KELGLSLSPNE------IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKGA 79 (96)
T ss_dssp CCCEEEEEECBTT-BCCCEEEEECS------SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC
T ss_pred CceEEEEEEeCCC-CCccEEEEeCC------CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 4567888977653 68999998722 5899999999999999998999999999999999999999999999876
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
.. .+.|
T Consensus 80 ~~-~v~l 85 (96)
T 2qkv_A 80 NG-KVSM 85 (96)
T ss_dssp SS-EEEE
T ss_pred CC-cEEE
Confidence 53 4543
No 270
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.46 E-value=5.1e-13 Score=97.17 Aligned_cols=84 Identities=31% Similarity=0.492 Sum_probs=68.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC-CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK-GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~-~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
.+.+++.+.+.. .+|||++.+..+... ...|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+|+.
T Consensus 3 ~~~~~v~l~~~~--~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (97)
T 2iwn_A 3 SETFDVELTKNV--QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH 80 (97)
T ss_dssp EEEEEEEEECBT--TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT
T ss_pred cEEEEEEEecCC--CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 345678887663 689999998754221 13589999999999999998899999999999999999999999999987
Q ss_pred cCCCceec
Q psy8436 298 IFPQSSKL 305 (306)
Q Consensus 298 ~~~~~~~l 305 (306)
.+..+.|
T Consensus 81 -~~~~v~l 87 (97)
T 2iwn_A 81 -TGQTVLL 87 (97)
T ss_dssp -CCSEEEE
T ss_pred -CCCeEEE
Confidence 5555544
No 271
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.46 E-value=4.6e-13 Score=101.81 Aligned_cols=84 Identities=31% Similarity=0.533 Sum_probs=68.2
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCC------CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPK------GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIA 293 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~------~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~ 293 (306)
..+.+.+.+... ..|||++.++.+... ...|++|..|.++|||+++|+|++||+|++|||+++.++++++++.
T Consensus 24 ~p~~v~l~k~~~-~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 24 QPRRVELWREPS-KSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp CCEEEEECCCTT-SCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCEEEEEEecCC-CCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 346788888753 689999987654321 1258999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCceec
Q psy8436 294 MFKDIFPQSSKL 305 (306)
Q Consensus 294 ~Lk~~~~~~~~l 305 (306)
+|+..+. .+.|
T Consensus 103 ~l~~~~~-~v~l 113 (123)
T 2iwq_A 103 AIRKAGN-PVVF 113 (123)
T ss_dssp HHHHCCS-SEEE
T ss_pred HHHcCCC-eEEE
Confidence 9998754 5544
No 272
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.46 E-value=6.3e-13 Score=98.60 Aligned_cols=83 Identities=24% Similarity=0.346 Sum_probs=66.8
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCC---------CCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKG---------NLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHA 289 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~---------~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~ 289 (306)
...+.|.|.|.. .+|||++.++.+.... ..++||..|.++|||+++| |++||+|++|||+++.+++|.
T Consensus 5 ~~~r~v~l~k~~--~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~ 81 (107)
T 3qe1_A 5 GSPRVVRIVKSE--SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATHK 81 (107)
T ss_dssp -CCEEEEEECBT--TBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHH
T ss_pred CCcEEEEEEECC--CCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 345789999985 5899999987543210 1245799999999999999 999999999999999999999
Q ss_pred HHHHHHhhcCCCceec
Q psy8436 290 EAIAMFKDIFPQSSKL 305 (306)
Q Consensus 290 eav~~Lk~~~~~~~~l 305 (306)
+++.+|++. +..+.|
T Consensus 82 ~~~~~l~~~-g~~v~l 96 (107)
T 3qe1_A 82 QVVDLIRAG-EKELIL 96 (107)
T ss_dssp HHHHHHHHC-SSEEEE
T ss_pred HHHHHHHcC-CCEEEE
Confidence 999999964 445443
No 273
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.46 E-value=4e-13 Score=96.42 Aligned_cols=81 Identities=17% Similarity=0.303 Sum_probs=68.5
Q ss_pred EEEEEEeCCCC--ceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CC
Q psy8436 6 KVFRVVKDDSN--ELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KD 81 (306)
Q Consensus 6 ~~v~l~r~~~~--~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~ 81 (306)
..+.+.+.++. +|||++.... .|++|..|.++|||+++| |+.||+|++|||+++.+.++.++..+|+. .+
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~~-----~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g 78 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWDI-----PGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQET 78 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEET-----TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCcccEEEEecC-----CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCCC
Confidence 45666666555 7999997432 479999999999999999 99999999999999987789999999985 47
Q ss_pred CeEEEEEEeCC
Q psy8436 82 SHVEIVICRNP 92 (306)
Q Consensus 82 ~~v~L~v~r~~ 92 (306)
..+.|+|.|+.
T Consensus 79 ~~v~l~v~R~g 89 (90)
T 2eaq_A 79 GHLVMDVRRYG 89 (90)
T ss_dssp TEEEEEEEEEC
T ss_pred CEEEEEEEeCC
Confidence 88999998853
No 274
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.46 E-value=5e-13 Score=96.50 Aligned_cols=75 Identities=28% Similarity=0.457 Sum_probs=64.3
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.|.. .+|||.+.+. .|++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++.
T Consensus 7 ~~~r~v~l~~~~--~~~G~~l~~~-------~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~- 75 (93)
T 2dls_A 7 GVQRCVIIQKDQ--HGFGFTVSGD-------RIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSHLEVVKLIKS- 75 (93)
T ss_dssp CCEEEEEEECSS--SSCCEEEECS-------SSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCHHHHHHHHTS-
T ss_pred CCCEEEEEEeCC--CceeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-
Confidence 456789998885 6899999753 489999999999999999 99999999999999999999999998873
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 76 -g~~v~l 81 (93)
T 2dls_A 76 -GAYVAL 81 (93)
T ss_dssp -SSEEEE
T ss_pred -CCEEEE
Confidence 555544
No 275
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.46 E-value=7.9e-14 Score=98.54 Aligned_cols=74 Identities=19% Similarity=0.397 Sum_probs=63.8
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
+++|.|.|+. .+|||.+.+. .|++|..|.+++||+++| |++||+|++|||+++.+++|++++.+|+...
T Consensus 3 ~r~v~l~~~~--~g~G~~~~~~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~- 71 (83)
T 2kv8_A 3 VRSVEVARGR--AGYGFTLSGQ-------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASHEDVVKLIGKCS- 71 (83)
T ss_dssp EEEEEECCCS--SCCSCBCCCS-------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCHHHHHHHHTTCS-
T ss_pred cEEEEEEeCC--CcccEEEEcC-------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-
Confidence 5689998885 6899998653 379999999999999999 9999999999999999999999999998764
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
..+.|
T Consensus 72 ~~v~l 76 (83)
T 2kv8_A 72 GVLHM 76 (83)
T ss_dssp SCEEE
T ss_pred CeEEE
Confidence 34443
No 276
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.45 E-value=4.1e-13 Score=101.61 Aligned_cols=79 Identities=37% Similarity=0.649 Sum_probs=68.2
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.|.. .+|||++.++.+. .|++|..|.++|||+++|.|++||+|++|||+++.++++.+++.+++..
T Consensus 13 ~~~~~v~l~k~~--~glG~~l~~~~~~----~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 86 (119)
T 1tp5_A 13 REPRRIVIHRGS--TGLGFNIVGGEDG----EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA 86 (119)
T ss_dssp CSCEEEEEECTT--SCCCEEEEECGGG----CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CccEEEEEEECC--CCccEEEecCCCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 457789999985 5799999987652 5899999999999999988999999999999999999999999988874
Q ss_pred CCCcee
Q psy8436 299 FPQSSK 304 (306)
Q Consensus 299 ~~~~~~ 304 (306)
+..+.
T Consensus 87 -~~~v~ 91 (119)
T 1tp5_A 87 -GQTVT 91 (119)
T ss_dssp -CSEEE
T ss_pred -CCeEE
Confidence 34443
No 277
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.45 E-value=3.9e-13 Score=96.02 Aligned_cols=78 Identities=28% Similarity=0.444 Sum_probs=63.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.++|.|.|+. .+|||++.+..+. .+++|..| +++||+ +| |++||+|++|||+++.+++|++++.+|++.
T Consensus 2 ~~~~~v~l~k~~--~g~G~~~~~~~~~----~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 72 (88)
T 3bpu_A 2 MELITVHIVKGP--MGFGFTIADSPGG----GGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTHNQVVDMLVES 72 (88)
T ss_dssp EEEEEEEEECBT--TBSSCEEEECTTS----SSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCHHHHHHHHHTS
T ss_pred CcEEEEEEEcCC--CceeEEEEecCCC----CcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCHHHHHHHHHhC
Confidence 356789999985 6899999876542 58999997 999999 77 999999999999999999999999999964
Q ss_pred -CCCceec
Q psy8436 299 -FPQSSKL 305 (306)
Q Consensus 299 -~~~~~~l 305 (306)
++..+.|
T Consensus 73 ~~g~~v~l 80 (88)
T 3bpu_A 73 PKGSEVTL 80 (88)
T ss_dssp CTTCEEEE
T ss_pred CCCCEEEE
Confidence 4555544
No 278
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.45 E-value=3.3e-13 Score=99.01 Aligned_cols=77 Identities=32% Similarity=0.511 Sum_probs=65.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+++.+.|.+.....+|||++.++.+.. .|++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 82 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEHG---VGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTHAEAVKALKGS 82 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTTT---CCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCHHHHHHHSSSS
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHhhcCC
Confidence 4567788887554578999999876532 589999999999999999 999999999999999999998888887654
Q ss_pred C
Q psy8436 299 F 299 (306)
Q Consensus 299 ~ 299 (306)
.
T Consensus 83 ~ 83 (101)
T 1uez_A 83 K 83 (101)
T ss_dssp S
T ss_pred C
Confidence 3
No 279
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.45 E-value=5e-13 Score=98.62 Aligned_cols=82 Identities=22% Similarity=0.247 Sum_probs=67.0
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCC----CCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDS----PKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~----~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
.+.+.|.|... .+|||.+.+.... .....+++|..|.+++||+++| |++||+|++|||+++.++++++++.+|+
T Consensus 16 ~~~v~l~~~~~-~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~l~ 93 (104)
T 2z17_A 16 RKLVTVEKQDN-ETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTYKQVVDLIR 93 (104)
T ss_dssp CCEEEEECCTT-SCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCHHHHHHHHH
T ss_pred ceEEEEEeCCC-CCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCHHHHHHHHH
Confidence 34677888753 6899999874221 1113589999999999999999 9999999999999999999999999999
Q ss_pred hcCCCceec
Q psy8436 297 DIFPQSSKL 305 (306)
Q Consensus 297 ~~~~~~~~l 305 (306)
..++ .+.|
T Consensus 94 ~~~~-~v~l 101 (104)
T 2z17_A 94 SSGN-LLTI 101 (104)
T ss_dssp HTTT-EEEE
T ss_pred hCCC-cEEE
Confidence 9855 5544
No 280
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.45 E-value=6.9e-14 Score=104.35 Aligned_cols=82 Identities=18% Similarity=0.301 Sum_probs=71.1
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC-e
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS-H 83 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~-~ 83 (306)
.|+|.|.| ...+|||.+.+. .+++|..|.+++||+++| |+.||+|++|||+++.+++++++..+|+.+++ .
T Consensus 16 ~r~v~l~~-~~~~~G~~l~~~------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~ 87 (111)
T 1vae_A 16 PRGIHFTV-EEGDLGFTLRGN------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEE 87 (111)
T ss_dssp CCCCCEEC-CSSCCSCCEESS------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSE
T ss_pred CeEEEEEc-CCCcccEEEeCC------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCce
Confidence 46788888 567999999654 468999999999999999 99999999999999999999999999998755 5
Q ss_pred EEEEEEeCCCC
Q psy8436 84 VEIVICRNPDD 94 (306)
Q Consensus 84 v~L~v~r~~~~ 94 (306)
+.|+|.+....
T Consensus 88 v~l~V~~~~~~ 98 (111)
T 1vae_A 88 VEMKVVSLLDS 98 (111)
T ss_dssp ECEEEECEECC
T ss_pred EEEEEEecCCC
Confidence 99999876443
No 281
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=7.7e-13 Score=96.87 Aligned_cols=80 Identities=31% Similarity=0.551 Sum_probs=67.4
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|.|.|... ..|||++.+..+. ..|++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+.
T Consensus 9 ~~~~~v~l~~~~~-~~lG~~~~~~~~~---~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~- 82 (100)
T 2eeh_A 9 DIIHSVRVEKSPA-GRLGFSVRGGSEH---GLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTMGSAVKVLTS- 82 (100)
T ss_dssp CEECCEEECCCSS-SSCSEEEECCTTT---TCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCHHHHHHHHHS-
T ss_pred CeEEEEEEEECCC-CCccEEEEccccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHhhcC-
Confidence 4466788988863 5799999887643 2589999999999999999 99999999999999999999999999987
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 83 -~~~v~l 88 (100)
T 2eeh_A 83 -SSRLHM 88 (100)
T ss_dssp -CSSEEE
T ss_pred -CCEEEE
Confidence 454443
No 282
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=2.2e-13 Score=100.91 Aligned_cols=74 Identities=23% Similarity=0.297 Sum_probs=65.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.|. ..+|||++.+..+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 7 ~~~r~v~l~k~--~~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 79 (106)
T 2eei_A 7 GQPRLCYLVKE--GGSYGFSLKTVQGK----KGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASHEEVVEKVKKS 79 (106)
T ss_dssp SSSEEEEEECC--SSSCSCCEECCSSC----CSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEEEC--CCCCCEEEEeccCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 34578999996 37899999876542 589999999999999999 999999999999999999999999999876
Q ss_pred C
Q psy8436 299 F 299 (306)
Q Consensus 299 ~ 299 (306)
.
T Consensus 80 ~ 80 (106)
T 2eei_A 80 G 80 (106)
T ss_dssp C
T ss_pred C
Confidence 3
No 283
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.44 E-value=1.9e-13 Score=100.67 Aligned_cols=79 Identities=25% Similarity=0.416 Sum_probs=66.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.++|+|... .+|||++.++.+.. .+++|..|.+++||+++| |++||+|++|||+++.++++.+++.++++.
T Consensus 4 g~~~~v~l~~~---~~~G~~l~gg~~~~---~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~~~~~ 76 (103)
T 1wf7_A 4 GSSGSVSLVGP---APWGFRLQGGKDFN---MPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTHLEAQNKIKAC 76 (103)
T ss_dssp CCCEEEEEESS---SCCSCCEEEETTTT---EEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCHHHHHHHHHHC
T ss_pred CCEEEEEEeCC---CccCEEEeccccCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 45677888732 67999999887642 579999999999999999 999999999999999999999999999876
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
...+.|
T Consensus 77 -g~~v~l 82 (103)
T 1wf7_A 77 -TGSLNM 82 (103)
T ss_dssp -SSEEEE
T ss_pred -CCeEEE
Confidence 444443
No 284
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.44 E-value=4.3e-13 Score=98.79 Aligned_cols=81 Identities=36% Similarity=0.597 Sum_probs=66.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCC---CC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHH
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDS---PK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIA 293 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~---~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~ 293 (306)
+..+.|.+.+.+ +|||++.++.+. +. ...|++|..|.++|||++ | |++||+|++|||+++.++++.+++.
T Consensus 10 ~~~~~v~l~~~~---~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~~~~~~ 84 (103)
T 1n7t_A 10 KQEIRVRVEKDP---ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVS 84 (103)
T ss_dssp CCCEEEEEECSS---CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCHHHHHH
T ss_pred cEEEEEEEccCC---CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCHHHHHH
Confidence 456678888873 699999997642 11 246899999999999999 7 9999999999999999999999999
Q ss_pred HHhhcCCCceec
Q psy8436 294 MFKDIFPQSSKL 305 (306)
Q Consensus 294 ~Lk~~~~~~~~l 305 (306)
+++.. +..+.|
T Consensus 85 ~~~~~-g~~v~l 95 (103)
T 1n7t_A 85 LLKTF-QNTVEL 95 (103)
T ss_dssp HHHHC-CSEEEE
T ss_pred HhhcC-CCeEEE
Confidence 99854 444443
No 285
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.44 E-value=1.2e-12 Score=97.93 Aligned_cols=80 Identities=20% Similarity=0.378 Sum_probs=68.2
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
.++|.|.++. ..+|||.+.+..+. .+++|..|.++|||+++|.|++||+|++|||.++.+++++++..+|+..++
T Consensus 2 ~~~v~l~~~~-~~glG~~~~~~~~~----~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g 76 (112)
T 1qau_A 2 VISVRLFKRK-VGGLGFLVKERVSK----PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIAS 76 (112)
T ss_dssp EEEEEEECBT-TTBTSEEEEECSSS----SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCS
T ss_pred EEEEEEEcCC-CCceeEEEEecCCC----CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4678888875 37899999876642 589999999999999999339999999999999999999999999998776
Q ss_pred Cceec
Q psy8436 301 QSSKL 305 (306)
Q Consensus 301 ~~~~l 305 (306)
..+.|
T Consensus 77 ~~v~l 81 (112)
T 1qau_A 77 ETHVV 81 (112)
T ss_dssp SSEEE
T ss_pred CcEEE
Confidence 66654
No 286
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.43 E-value=4.5e-13 Score=123.32 Aligned_cols=83 Identities=18% Similarity=0.355 Sum_probs=75.4
Q ss_pred cEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCC
Q psy8436 5 FKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDS 82 (306)
Q Consensus 5 ~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~ 82 (306)
+|.|.+.|. .+|||++.|+.. .|+||..|.+||||+++| |++||+|++|||+++.++++++++.+|+. ++.
T Consensus 2 ~r~V~l~k~--~~lG~~i~gg~~----~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~ 74 (468)
T 3shw_A 2 MKLVKFRKG--DSVGLRLAGGND----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 74 (468)
T ss_dssp EEEEEEECC--SSCCEEEEEETT----TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred ceEEEEecC--CccceEEEccCc----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCC
Confidence 578999984 789999998865 479999999999999999 99999999999999999999999999998 688
Q ss_pred eEEEEEEeCCCC
Q psy8436 83 HVEIVICRNPDD 94 (306)
Q Consensus 83 ~v~L~v~r~~~~ 94 (306)
.|+|+|.|+...
T Consensus 75 ~v~L~V~r~g~~ 86 (468)
T 3shw_A 75 EVTILAQKKKDV 86 (468)
T ss_dssp EEEEEEEECHHH
T ss_pred EEEEEEEECCcc
Confidence 999999997543
No 287
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=3.3e-13 Score=101.11 Aligned_cols=80 Identities=43% Similarity=0.652 Sum_probs=68.9
Q ss_pred ccceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 218 SLSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 218 ~~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
....+.|.|.|.. .+|||+|.++.+. .|++|..|.++++|+++|+|++||+|++|||+++.++++.+++.+++.
T Consensus 13 ~~~~~~v~l~k~~--~glG~~l~~~~~~----~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~ 86 (113)
T 1um7_A 13 AREPRKIILHKGS--TGLGFNIVGGEDG----EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR 86 (113)
T ss_dssp CCSEEEEEEECCS--SCSSBCCBCCSTT----CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS
T ss_pred CCceEEEEEEECC--CcccEEEEeccCC----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3567899999874 6899999887752 589999999999999998899999999999999999999999999986
Q ss_pred cCCCcee
Q psy8436 298 IFPQSSK 304 (306)
Q Consensus 298 ~~~~~~~ 304 (306)
. ...+.
T Consensus 87 ~-~~~v~ 92 (113)
T 1um7_A 87 A-GQSVT 92 (113)
T ss_dssp C-CSEEE
T ss_pred C-CCcEE
Confidence 4 44443
No 288
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.43 E-value=1.1e-13 Score=101.96 Aligned_cols=80 Identities=39% Similarity=0.668 Sum_probs=67.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.+.+.+.. .+|||++.++.+.. .|++|..|.+++||+++|.|++||+|++|||+++.++++.+++.+|+..
T Consensus 10 ~~~~~v~l~~~~--~g~G~~~~~~~~~~---~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 84 (103)
T 1wfv_A 10 FDYFTVDMEKGA--KGFGFSIRGGREYK---MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSG 84 (103)
T ss_dssp SCCEECCEECCT--TSSSBCCEEETTTT---EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHH
T ss_pred ceEEEEEEecCC--CcCCEEEeccccCC---CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 445677888774 57999999877542 4899999999999999988999999999999999999999999999843
Q ss_pred CCCcee
Q psy8436 299 FPQSSK 304 (306)
Q Consensus 299 ~~~~~~ 304 (306)
+..+.
T Consensus 85 -g~~v~ 89 (103)
T 1wfv_A 85 -GRRVR 89 (103)
T ss_dssp -CSEEC
T ss_pred -CCeEE
Confidence 34443
No 289
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.42 E-value=6.8e-13 Score=95.17 Aligned_cols=76 Identities=20% Similarity=0.380 Sum_probs=61.3
Q ss_pred cceEEEEEEeCCC-CCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPG-QKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~-~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
...+.|.|.|.+. ..+|||++...... +..|++|..|.++|||+++| |++||+|++|||+++.+++++++..+|++
T Consensus 5 ~~~~~v~i~k~~~~~~~~Gf~v~~~~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~l~~~l~~ 81 (94)
T 3kzd_A 5 KVTHSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 81 (94)
T ss_dssp CEEEEEEEEC------CCSEEEEEECSS--SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCHHHHHHHHHS
T ss_pred cceeEEEEEeCCCCcCCcCEEEEecCCC--CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhC
Confidence 3457788888863 24799999874432 22589999999999999998 99999999999999999999999999984
No 290
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.42 E-value=6.7e-13 Score=95.70 Aligned_cols=78 Identities=15% Similarity=0.353 Sum_probs=66.9
Q ss_pred EEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc---CCC
Q psy8436 6 KVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN---KDS 82 (306)
Q Consensus 6 ~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~---~~~ 82 (306)
+.+.|.+ ...++||.+.... .+.+|..|.++|||+++| |++||+|++|||..+...+++++...++. .+.
T Consensus 19 ~~l~l~~-~~~g~G~~l~~~~-----~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~ 91 (101)
T 3qik_A 19 KRLLILP-QEEDYGFDIEEKN-----KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRR 91 (101)
T ss_dssp EEEEECC-CSSSSSEEEEEET-----TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTC
T ss_pred CeEEEEe-CCCcccEEEEccC-----CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCC
Confidence 3445555 5679999998632 358999999999999999 99999999999999988899999999987 488
Q ss_pred eEEEEEEe
Q psy8436 83 HVEIVICR 90 (306)
Q Consensus 83 ~v~L~v~r 90 (306)
.|.|+|+.
T Consensus 92 ~v~LLV~~ 99 (101)
T 3qik_A 92 PLRLLVAT 99 (101)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEec
Confidence 99999975
No 291
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=7e-13 Score=101.03 Aligned_cols=90 Identities=20% Similarity=0.371 Sum_probs=72.6
Q ss_pred ccEEEEEEeCC-CCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-C
Q psy8436 4 QFKVFRVVKDD-SNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-D 81 (306)
Q Consensus 4 ~~~~v~l~r~~-~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-~ 81 (306)
+++.+.+.+.. ..+|||++..........|++|..|.++|||+++|+|++||+|++|||+.+. ++.++..+|+.. +
T Consensus 19 ~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g 96 (124)
T 1wh1_A 19 ELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSEEN 96 (124)
T ss_dssp EECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCSSC
T ss_pred eEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhCCC
Confidence 44455565543 3589999987754322358999999999999999999999999999999998 588999999886 6
Q ss_pred CeEEEEEEeCCCCC
Q psy8436 82 SHVEIVICRNPDDA 95 (306)
Q Consensus 82 ~~v~L~v~r~~~~~ 95 (306)
..|.|+|.|.....
T Consensus 97 ~~v~l~v~R~g~~~ 110 (124)
T 1wh1_A 97 KNFSLLIARPELQL 110 (124)
T ss_dssp CSCCEEEEECSSCC
T ss_pred CEEEEEEEECCEEe
Confidence 78999999976543
No 292
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=1.5e-12 Score=93.29 Aligned_cols=74 Identities=23% Similarity=0.426 Sum_probs=61.3
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
....+.+.+.....+|||.+.+ | +|..|.++|+|+++| |++||+|++|||+++.++++.+++.+|++.
T Consensus 11 ~~~~~~i~~~~~~~~lG~~~~~---------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~- 78 (90)
T 1y7n_A 11 NVTTVLIRRPDLRYQLGFSVQN---------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPHEKIVHILSNA- 78 (90)
T ss_dssp SCEEEEEEESSTTSCCCEEEET---------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCHHHHHHHHHHC-
T ss_pred CcceEEEEeCCCccccCeEecC---------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3445666666555789999853 4 899999999999999 999999999999999999999999999965
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 79 g~~v~l 84 (90)
T 1y7n_A 79 VGEIHM 84 (90)
T ss_dssp CEEEEE
T ss_pred CCeEEE
Confidence 455444
No 293
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.42 E-value=1.5e-12 Score=94.57 Aligned_cols=76 Identities=32% Similarity=0.471 Sum_probs=63.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
.+.+.+.|.|.. .+|||+|.+.. .|++|..|.++ |+++| |++||+|++|||+++.+++|++++++|+..
T Consensus 9 ~~~~~v~l~~~~--~g~G~~i~~~~------~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 77 (96)
T 1ujv_A 9 AELMTLTIVKGA--QGFGFTIADSP------TGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHTEVVDILKDC 77 (96)
T ss_dssp CCCEEEEEECCS--SSSSEEEEEET------TEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHHHHHHHHHHS
T ss_pred ceEEEEEEEeCC--CceeEEEEcCC------CCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 556788999885 78999997533 38999999983 66666 999999999999999999999999999998
Q ss_pred C-CCceec
Q psy8436 299 F-PQSSKL 305 (306)
Q Consensus 299 ~-~~~~~l 305 (306)
+ +..+.|
T Consensus 78 ~~g~~v~l 85 (96)
T 1ujv_A 78 PIGSETSL 85 (96)
T ss_dssp CTTSEEEE
T ss_pred CCCCEEEE
Confidence 6 666654
No 294
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.42 E-value=9.1e-13 Score=102.36 Aligned_cols=86 Identities=30% Similarity=0.391 Sum_probs=69.8
Q ss_pred cceEEEEEEeCC--CCCcccEEEEcCCCCC---------CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCC
Q psy8436 219 LSMFTVTFQKGP--GQKSLGFSIVGGRDSP---------KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKT 287 (306)
Q Consensus 219 ~~~~~v~l~k~~--~~~~lG~~l~gg~~~~---------~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~ 287 (306)
..++.|.|.+.. +..+|||++.++.+.. ....|++|..|.++|||+++| |++||+|++|||+++.+++
T Consensus 22 ~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~ 100 (139)
T 2vz5_A 22 SMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVT 100 (139)
T ss_dssp CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCC
T ss_pred CceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCCCC
Confidence 456778887642 1237999999876631 113699999999999999999 9999999999999999999
Q ss_pred HHHHHHHHhhcCCCceec
Q psy8436 288 HAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 288 ~~eav~~Lk~~~~~~~~l 305 (306)
+.+++.+|+..++..+.|
T Consensus 101 ~~~~~~~l~~~~g~~v~l 118 (139)
T 2vz5_A 101 HDQARKRLTKRSEEVVRL 118 (139)
T ss_dssp HHHHHHHHCCTTCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEE
Confidence 999999999866666654
No 295
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.42 E-value=1.3e-12 Score=100.04 Aligned_cols=80 Identities=26% Similarity=0.470 Sum_probs=68.9
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.+.. .+|||.+.++.+. .|++|..|.++|+|+++| |++||+|++|||+++.++++.++..+|+..
T Consensus 8 ~~~r~v~l~~~~--~g~G~~l~~~~~~----~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 80 (128)
T 2kjd_A 8 LRPRLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (128)
T ss_dssp CCCEEEEEECCS--SSCCEEEEECSSS----CSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTT
T ss_pred CCcEEEEEecCC--CcccEEEEecCCC----CCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 345678898885 6899999887653 489999999999999999 999999999999999999999999999988
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
++..+.|
T Consensus 81 ~~~~~~l 87 (128)
T 2kjd_A 81 GDETKLL 87 (128)
T ss_dssp CSEEEEE
T ss_pred CCCEEEE
Confidence 6555433
No 296
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.42 E-value=5.2e-13 Score=109.69 Aligned_cols=80 Identities=29% Similarity=0.528 Sum_probs=69.1
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.|..+ .+|||++.++.+. ..|+||..|.++|||+++| |++||+|++|||.++.+++|.+++.+|+.
T Consensus 83 ~~~~~v~l~k~~~-~~lG~~i~~~~~~---~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~l~~- 156 (192)
T 3k1r_A 83 RKLKEVRLDRLHP-EGLGLSVRGGLEF---GCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHEEVINLIRT- 156 (192)
T ss_dssp SSCEEEEEETTST-TCCCEEEEEEGGG---TEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHTS-
T ss_pred CceEEEEEEeCCC-CceeEEEEccccc---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHcC-
Confidence 4467899999864 6999999987653 2589999999999999999 99999999999999999999999999988
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+..+.|
T Consensus 157 -~~~v~l 162 (192)
T 3k1r_A 157 -EKTVSI 162 (192)
T ss_dssp -SSEEEE
T ss_pred -CCeEEE
Confidence 455544
No 297
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.42 E-value=9.7e-13 Score=99.17 Aligned_cols=90 Identities=12% Similarity=0.310 Sum_probs=70.0
Q ss_pred ccEEEEEEeCCCCceeEEEEecCC-CCcCCCeEEEEeCC--CChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 4 QFKVFRVVKDDSNELGIYIERQDG-GAHFSPYLISHIEP--GGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 4 ~~~~v~l~r~~~~~lG~~i~gg~~-~~~~~gi~V~~V~~--gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
.++.+.+.+...+.+||.+.-... .....|++|..|.+ ++||+++| |+.||+|++|||+.+.+++|+++..+|+..
T Consensus 15 ~v~l~~~~~~~~g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~ 93 (118)
T 2yub_A 15 SVTLISMPATTECRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQT 93 (118)
T ss_dssp EEEEEEECSCSSSSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCC
T ss_pred eeEEeccCCccCCCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhC
Confidence 344444444444556766663322 11225899999999 99999999 999999999999999999999999999987
Q ss_pred CCeEEEEEEeCCCC
Q psy8436 81 DSHVEIVICRNPDD 94 (306)
Q Consensus 81 ~~~v~L~v~r~~~~ 94 (306)
+..+.|+|.|....
T Consensus 94 g~~v~l~v~R~g~~ 107 (118)
T 2yub_A 94 SQTLQLLIEHDPVP 107 (118)
T ss_dssp SSCEEEEEEECSSC
T ss_pred CCEEEEEEEECCEE
Confidence 77899999997643
No 298
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.41 E-value=3.5e-13 Score=102.42 Aligned_cols=79 Identities=16% Similarity=0.284 Sum_probs=67.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.+.|.+.. .+|||++.+.. .+++|..|.++|||+++|+|++||+|++|||+++.+.+|.+++.+|+..
T Consensus 26 ~~~~~~~l~k~~--~glG~~i~~~~------~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~ 97 (126)
T 1wif_A 26 NKVIQTKLTVGN--LGLGLVVIQNG------PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNI 97 (126)
T ss_dssp CCEEEEEEECCT--TCCCCCEEEET------TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSC
T ss_pred CceEEEEEecCC--ceEeEEEEcCC------CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcC
Confidence 456778888885 68999998643 4799999999999999999999999999999999999999999999986
Q ss_pred C-CCceec
Q psy8436 299 F-PQSSKL 305 (306)
Q Consensus 299 ~-~~~~~l 305 (306)
+ +..+.|
T Consensus 98 ~~G~~v~l 105 (126)
T 1wif_A 98 TIGTVLQI 105 (126)
T ss_dssp CSSCEEEE
T ss_pred CCCCEEEE
Confidence 4 555554
No 299
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.41 E-value=3e-13 Score=97.90 Aligned_cols=76 Identities=37% Similarity=0.521 Sum_probs=63.5
Q ss_pred EEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCce
Q psy8436 224 VTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSS 303 (306)
Q Consensus 224 v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~ 303 (306)
+.+.+.. ..+|||++.++.+.. .|++|..|.+++||+++| |++||+|++|||+++.+++|.+++.+|+..+ ..+
T Consensus 8 ~~~~~~~-~~~lG~~l~~g~~~~---~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v 81 (94)
T 1vb7_A 8 LTVDVAG-PAPWGFRISGGRDFH---TPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPL 81 (94)
T ss_dssp EEEEECS-SSCCSBCCEEETTTT---EEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSE
T ss_pred EEEEecC-CCCccEEEecccCCC---CCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcE
Confidence 3444333 368999999877642 589999999999999998 9999999999999999999999999999876 555
Q ss_pred ec
Q psy8436 304 KL 305 (306)
Q Consensus 304 ~l 305 (306)
.|
T Consensus 82 ~l 83 (94)
T 1vb7_A 82 RL 83 (94)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 300
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.11 E-value=2.1e-14 Score=107.34 Aligned_cols=81 Identities=28% Similarity=0.466 Sum_probs=67.3
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.++.|.|.|... .+|||++.++.+.. .|++|..|.++|||+++++|++||+|++|||+++.++++.+++.+|++.+
T Consensus 27 ~~~~v~l~k~~~-~glG~~l~~g~~~~---~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~ 102 (112)
T 2lob_A 27 GIRKVLLLKEDH-EGLGISITGGKEHG---VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR 102 (112)
Confidence 456788888764 78999999886642 58999999999999994349999999999999999999999999998765
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+. +.|
T Consensus 103 ~~-v~l 107 (112)
T 2lob_A 103 GE-IEF 107 (112)
Confidence 44 443
No 301
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.40 E-value=1.3e-12 Score=118.55 Aligned_cols=85 Identities=18% Similarity=0.345 Sum_probs=75.2
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--C
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--K 80 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~ 80 (306)
.+++.|.+.+. .+|||++.++.. .|++|..|.+||||+++| |++||+|++|||+++.++++++++.+|+. .
T Consensus 8 ~~~~~v~~~k~--~~lG~~i~gg~~----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~ 80 (391)
T 3tsz_A 8 PSMKLVKFRKG--DSVGLRLAGGND----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK 80 (391)
T ss_dssp -CEEEEEEECC--SSCCEEEEEETT----TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CCcEEEEeecC--CceeEEEEecCC----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhcC
Confidence 45788888884 379999998765 479999999999999999 99999999999999999999999999995 6
Q ss_pred CCeEEEEEEeCCCC
Q psy8436 81 DSHVEIVICRNPDD 94 (306)
Q Consensus 81 ~~~v~L~v~r~~~~ 94 (306)
+..|+|+|.|+...
T Consensus 81 g~~v~l~v~r~~~~ 94 (391)
T 3tsz_A 81 GEEVTILAQKKKDV 94 (391)
T ss_dssp TSEEEEEEEECHHH
T ss_pred CCeEEEEEeeCCcc
Confidence 88999999997644
No 302
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=99.40 E-value=5.9e-12 Score=117.84 Aligned_cols=53 Identities=9% Similarity=0.160 Sum_probs=47.8
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
.|++|.+|.++++|+..| ++.||+|++|||++|.+ .++..++|++++++.++|
T Consensus 415 ~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~s--~~~l~~~l~~~k~~~l~~ 467 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIRN--IHHLAHLIDMCKDKYLVF 467 (539)
T ss_dssp CCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECCS--HHHHHHHHHTCCSSEEEE
T ss_pred eEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcCC--HHHHHHHHHHcCCCeEEE
Confidence 589999999999999988 99999999999999976 579999999998876654
No 303
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.39 E-value=1.2e-12 Score=98.18 Aligned_cols=79 Identities=24% Similarity=0.425 Sum_probs=67.6
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..+++.|.+... ..|||.+.+..+. .|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 13 dp~~~~l~~~~~-~~~G~~l~~~~~~----~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~- 85 (114)
T 2edz_A 13 NPRECKLSKQEG-QNYGFFLRIEKDT----DGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEHAQVVELVRKS- 85 (114)
T ss_dssp CCEEEEEECCTT-CCCSCEEECCTTC----CSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCHHHHHHHHHHT-
T ss_pred CCEEEEEeCCCC-CcccEEEEEecCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 457888888753 6899999876543 589999999999999999 999999999999999999999999999875
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 86 g~~v~l 91 (114)
T 2edz_A 86 GNSVTL 91 (114)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 555554
No 304
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.39 E-value=2.6e-13 Score=112.96 Aligned_cols=85 Identities=14% Similarity=0.285 Sum_probs=74.6
Q ss_pred cccEEEEEEeCCCCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC
Q psy8436 3 KQFKVFRVVKDDSNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS 82 (306)
Q Consensus 3 ~~~~~v~l~r~~~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~ 82 (306)
-..+.|.|.+.. .+|||.|.++... .|++|..|.++|||+++| |+.||+|++|||+.+.++++.++..+|+..+.
T Consensus 8 ~~~r~v~l~k~~-~glG~~l~~~~~~---~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~ 82 (216)
T 2krg_A 8 LRPRLCTMKKGP-SGYGFNLHSDKSK---PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (216)
T ss_dssp CCCEEEEEECCS-SSSCEEECCCSSS---CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHHCS
T ss_pred cceEEEEEEeCC-CCceEEEEecCCC---CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 457889999954 6899999877543 489999999999999999 99999999999999999999999999988777
Q ss_pred eE-EEEEEeCC
Q psy8436 83 HV-EIVICRNP 92 (306)
Q Consensus 83 ~v-~L~v~r~~ 92 (306)
.| .|+|.|..
T Consensus 83 ~v~~l~V~R~g 93 (216)
T 2krg_A 83 ETKLLVVDRET 93 (216)
T ss_dssp EEEEEECCHHH
T ss_pred eEEEEEEEECC
Confidence 88 88887754
No 305
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.39 E-value=2.4e-12 Score=98.01 Aligned_cols=74 Identities=35% Similarity=0.634 Sum_probs=62.0
Q ss_pred EEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh-cCCC
Q psy8436 223 TVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD-IFPQ 301 (306)
Q Consensus 223 ~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~-~~~~ 301 (306)
.+.+.+. .+|||.+.++.+ .|++|..|.++|||+++| |++||+|++|||+++.++++++++.+|++ .++.
T Consensus 32 ~~~~~~~---~~lG~~l~~~~~-----~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~ 102 (124)
T 3tsv_A 32 LVKFRKG---DSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGE 102 (124)
T ss_dssp EEEEECS---SCCCEEEEECTT-----SCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTC
T ss_pred EEEcCCC---CceeEEEecCCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCC
Confidence 3444444 579999998765 589999999999999999 99999999999999999999999998887 4445
Q ss_pred ceec
Q psy8436 302 SSKL 305 (306)
Q Consensus 302 ~~~l 305 (306)
.+.|
T Consensus 103 ~v~l 106 (124)
T 3tsv_A 103 EVTI 106 (124)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 306
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.38 E-value=1.3e-12 Score=95.49 Aligned_cols=79 Identities=23% Similarity=0.258 Sum_probs=62.4
Q ss_pred EEEEEeCCCCCcccEEEEcCCCCC----CCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 223 TVTFQKGPGQKSLGFSIVGGRDSP----KGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 223 ~v~l~k~~~~~~lG~~l~gg~~~~----~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
+|.|.+.. .+|||++.++.... ....|++|..|.++|||+++| |++||+|++|||+++.++++.+++.+|++
T Consensus 5 ~v~l~~~~--~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~- 80 (99)
T 3khf_A 5 PIVIHSSG--KKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVHMDVVELLLK- 80 (99)
T ss_dssp CEEEEC-C--CCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCHHHHHHHHHH-
T ss_pred CEEEEeCC--CCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhc-
Confidence 47777764 68999998654321 001367899999999999999 99999999999999999999999999995
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
++..+.|
T Consensus 81 ~g~~v~l 87 (99)
T 3khf_A 81 SGNKISL 87 (99)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 4455443
No 307
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.37 E-value=2e-12 Score=106.52 Aligned_cols=86 Identities=23% Similarity=0.316 Sum_probs=72.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCC-CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPK-GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~-~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
.+.++|.|.|+.. .+|||++.++.+... +..+++|..|.++|||+++|+|++||+|++|||+++.+++|.++..+|+.
T Consensus 5 ~~~~~v~l~~~~~-~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 83 (196)
T 1p1d_A 5 TETTEVVLTADPV-TGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRD 83 (196)
T ss_dssp CEEEEEEEECBTT-TBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHT
T ss_pred cEEEEEEEEeCCC-CccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 4677899998864 799999999865432 24689999999999999998899999999999999999999999999998
Q ss_pred cC-CCceec
Q psy8436 298 IF-PQSSKL 305 (306)
Q Consensus 298 ~~-~~~~~l 305 (306)
.+ +..+.|
T Consensus 84 ~~~g~~v~l 92 (196)
T 1p1d_A 84 SSITSKVTL 92 (196)
T ss_dssp CCSSSEEEE
T ss_pred CCCCCeEEE
Confidence 86 444443
No 308
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=5.8e-13 Score=96.74 Aligned_cols=77 Identities=25% Similarity=0.368 Sum_probs=64.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...++|+|.+.+...+|||.+.+. .|++|..|.++|||+ +| |++||+|++|||+++.+++|.+++.+++.
T Consensus 7 ~~~~~v~l~~~~~~~~~G~~l~~~-------~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~~v~~~~~~~~~~~~~~- 76 (96)
T 2edv_A 7 GVRHTVKIDKDTLLQDYGFHISES-------LPLTVVAVTAGGSAH-GK-LFPGDQILQMNNEPAEDLSWERAVDILRE- 76 (96)
T ss_dssp CEEEEEEECCCSSSCSCSBCCCSS-------SSCBCCCBCSSSSST-TT-SCTTCBEEEESSCBSTTCCHHHHHHHHHH-
T ss_pred CccEEEEEEECCCCCcccEEEecC-------CCeEEEEECCCCchh-hC-CCCCCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 446789999886445899999761 489999999999995 55 99999999999999999999999999998
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
.+..+.|
T Consensus 77 ~g~~v~l 83 (96)
T 2edv_A 77 AEDSLSI 83 (96)
T ss_dssp CSSCEEE
T ss_pred CCCeEEE
Confidence 4555544
No 309
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.37 E-value=1.4e-12 Score=95.47 Aligned_cols=76 Identities=20% Similarity=0.305 Sum_probs=64.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.+.+.+.. .+|||.+.+. .+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 14 ~~~~~v~l~~~~--~g~G~~~~~~-------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 83 (100)
T 1whd_A 14 GEKLQITIRRGK--DGFGFTICCD-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKCVELAHEIRSC 83 (100)
T ss_dssp CEEEEEEEECCS--SSSSCBCCCS-------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCHHHHHHHHHHC
T ss_pred cceEEEEEECCC--CeeeEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 456778888774 6899998653 379999999999999999 999999999999999999999999999986
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+.. +.|
T Consensus 84 ~~~-v~l 89 (100)
T 1whd_A 84 PSE-IIL 89 (100)
T ss_dssp SSE-EEE
T ss_pred CCe-EEE
Confidence 543 443
No 310
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.36 E-value=5e-12 Score=94.82 Aligned_cols=75 Identities=31% Similarity=0.403 Sum_probs=63.9
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...++|.+.+.. ..+|||++.++.+.. .|++|..|.++++|+++| |++||+|++|||+++.++++.+++.+++..
T Consensus 14 ~~~~~v~~~~~~-~~~lG~~l~~~~~~~---~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 88 (114)
T 1x5n_A 14 NKEKKVFISLVG-SRGLGCSISSGPIQK---PGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDHKEAVNVLKSS 88 (114)
T ss_dssp CSSEEEEECCCS-SCCCCEEEEECCSSS---CSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCTTHHHHHHHHC
T ss_pred CCcEEEEEEEcC-CCceeEEEeecCCCC---CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 334677776654 478999999876532 589999999999999998 999999999999999999998999999875
No 311
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.3e-12 Score=95.73 Aligned_cols=78 Identities=35% Similarity=0.520 Sum_probs=62.8
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP 300 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~ 300 (306)
...+.+.+... .+|||++.++.+.. .+++|..|.+++||+++|.|++||+|++|||+++.++ +.+++.++++..
T Consensus 10 ~~~~~v~~~~~-~~~G~~~~gg~~~~---~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~- 83 (100)
T 2edp_A 10 FQYVPVQLQGG-APWGFTLKGGLEHC---EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQEALILIKGSF- 83 (100)
T ss_dssp CEEEEEECCSC-SCCCCCEEEEGGGT---EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCC-
T ss_pred cEEEEEEECCC-CCcCEEEeccCCCC---CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCC-
Confidence 44555555433 68999999877642 5799999999999999944999999999999999997 899999999763
Q ss_pred Ccee
Q psy8436 301 QSSK 304 (306)
Q Consensus 301 ~~~~ 304 (306)
..+.
T Consensus 84 ~~v~ 87 (100)
T 2edp_A 84 RILK 87 (100)
T ss_dssp SSCE
T ss_pred CeEE
Confidence 4443
No 312
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.35 E-value=5.1e-12 Score=95.22 Aligned_cols=76 Identities=29% Similarity=0.427 Sum_probs=64.5
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
+.+.|.+.+.. .+|||.+.++.+ .|++|..|.+++||+++| |++||+|++|||+++.++++.+++.+++. +
T Consensus 19 ~~~~v~l~~~~--~~lG~~~~~~~~-----~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~~~~~~~~~~-~ 89 (117)
T 1uit_A 19 EPRHVKVQKGS--EPLGISIVSGEK-----GGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATEQQARLIIGQ-Q 89 (117)
T ss_dssp CCEEEEEECSS--CCCCEEEEECTT-----SCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCHHHHHHHTTS-C
T ss_pred CCEEEEEEeCC--CCccEEEEccCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHc-C
Confidence 45678998875 689999988765 589999999999999999 99999999999999999999998876664 4
Q ss_pred CCcee
Q psy8436 300 PQSSK 304 (306)
Q Consensus 300 ~~~~~ 304 (306)
...+.
T Consensus 90 g~~v~ 94 (117)
T 1uit_A 90 CDTIT 94 (117)
T ss_dssp CSEEE
T ss_pred CCeEE
Confidence 44443
No 313
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.35 E-value=5.4e-13 Score=99.47 Aligned_cols=74 Identities=23% Similarity=0.311 Sum_probs=63.7
Q ss_pred EEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCC
Q psy8436 222 FTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQ 301 (306)
Q Consensus 222 ~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~ 301 (306)
+.|.|.|+. .+|||.+.+. .+++|..|.++++|+++| |++||+|++|||+++.++++++++.+|+..++.
T Consensus 17 r~v~l~~~~--~~~G~~l~~~-------~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~ 86 (111)
T 1vae_A 17 RGIHFTVEE--GDLGFTLRGN-------TPVQVHFLDPHCSASLAG-AKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGE 86 (111)
T ss_dssp CCCCEECCS--SCCSCCEESS-------SSCEECCCCTTSSHHHHH-CCTTCEEEEETTEECSSCCHHHHHHHHHHTTTS
T ss_pred eEEEEEcCC--CcccEEEeCC-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 457788864 6899999654 378999999999999998 999999999999999999999999999988776
Q ss_pred ceec
Q psy8436 302 SSKL 305 (306)
Q Consensus 302 ~~~l 305 (306)
.+.|
T Consensus 87 ~v~l 90 (111)
T 1vae_A 87 EVEM 90 (111)
T ss_dssp EECE
T ss_pred eEEE
Confidence 5544
No 314
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=6.6e-13 Score=101.49 Aligned_cols=81 Identities=31% Similarity=0.402 Sum_probs=65.1
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCC-------------------------CCCCcEEEEEEcCCChhhhcCCCCCCCEE
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSP-------------------------KGNLGIFVKTIFQSGQAAENEKLREGDEI 275 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~-------------------------~~~~gi~V~~V~~~g~A~~~G~L~~GD~I 275 (306)
++.|+|.|.. .+|||+|.+..... ....+++|..|.+++||+++| |++||+|
T Consensus 9 ~r~v~l~r~~--~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I 85 (126)
T 2yuy_A 9 PKTVTLKRTS--QGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRI 85 (126)
T ss_dssp CCCEEEECCS--SSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCC
T ss_pred CEEEEEEECC--CCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEE
Confidence 4468999885 68999997521100 012579999999999999999 9999999
Q ss_pred EEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 276 IAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 276 l~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
++|||+++.+++|++++.+|+.. +..+.|
T Consensus 86 ~~ing~~v~~~~~~~~~~~l~~~-g~~v~l 114 (126)
T 2yuy_A 86 IKVNGESVIGKTYSQVIALIQNS-DTTLEL 114 (126)
T ss_dssp CEETTEECSSCCHHHHHHHHHTC-TTEEEE
T ss_pred EEECCEECCCCCHHHHHHHHHcC-CCEEEE
Confidence 99999999999999999999975 555544
No 315
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.34 E-value=6.1e-13 Score=97.97 Aligned_cols=76 Identities=30% Similarity=0.362 Sum_probs=63.8
Q ss_pred EEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCC
Q psy8436 222 FTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQ 301 (306)
Q Consensus 222 ~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~ 301 (306)
++|.+... .+|||++.++.+.. .+++|..|.+++||+++| |++||+|++|||+++.++++.+++.+|+.. ..
T Consensus 7 ~~v~~~~~---~~lG~~l~~g~~~~---~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~ 78 (103)
T 1v5l_A 7 GNVVLPGP---APWGFRLSGGIDFN---QPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTHADAQDRIKAA-SY 78 (103)
T ss_dssp BCCEEESS---SCCSBCCEEETTTT---EEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCHHHHHHHHTTC-CS
T ss_pred EEEEEcCC---CCcCEEEeccccCC---CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhC-CC
Confidence 34555433 57999999887642 489999999999999998 999999999999999999999999999987 55
Q ss_pred ceec
Q psy8436 302 SSKL 305 (306)
Q Consensus 302 ~~~l 305 (306)
.+.|
T Consensus 79 ~v~l 82 (103)
T 1v5l_A 79 QLCL 82 (103)
T ss_dssp EEEC
T ss_pred eEEE
Confidence 5544
No 316
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2.8e-12 Score=95.96 Aligned_cols=76 Identities=20% Similarity=0.369 Sum_probs=64.0
Q ss_pred cceEEEEEEeCCCC-CcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 219 LSMFTVTFQKGPGQ-KSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 219 ~~~~~v~l~k~~~~-~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
..++.|.|.|.... .+|||+|.+..+. +..|++|..|.+++||+++| |++||+|++|||+++.+++|.+++.+|+.
T Consensus 14 ~~~~~v~l~k~~~~~~~~G~~v~~~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~~~~~~~l~~ 90 (114)
T 2d8i_A 14 KVTQSIHIEKSDTAADTYGFSLSSVEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNSSMLKDFLSQ 90 (114)
T ss_dssp CEEEEEEEECSCTTTCCCCCEEEEEEET--TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCHHHHHHHHTS
T ss_pred CceEEEEEEeCCCCccccCEEEEecCcC--CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHhC
Confidence 45688999988642 2699999874432 11489999999999999999 99999999999999999999999999985
No 317
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.33 E-value=3.8e-12 Score=117.13 Aligned_cols=76 Identities=36% Similarity=0.645 Sum_probs=67.1
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-C
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-F 299 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~ 299 (306)
.+.|.|.|+ .+|||++.|+.+ .|+||..|.+||||+++| |++||+|++|||+++.++++++++.+|+.. +
T Consensus 2 ~r~V~l~k~---~~lG~~i~gg~~-----~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~ 72 (468)
T 3shw_A 2 MKLVKFRKG---DSVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLPK 72 (468)
T ss_dssp EEEEEEECC---SSCCEEEEEETT-----TEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred ceEEEEecC---CccceEEEccCc-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 467888886 579999999876 599999999999999999 999999999999999999999999999986 4
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 73 g~~v~L 78 (468)
T 3shw_A 73 GEEVTI 78 (468)
T ss_dssp TSEEEE
T ss_pred CCEEEE
Confidence 455544
No 318
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.33 E-value=2.2e-12 Score=98.66 Aligned_cols=82 Identities=20% Similarity=0.355 Sum_probs=69.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.|.|.++.. .+|||.+.+..+. .+++|..|.++|+|+++|-|++||+|++|||+++.+++++++..+|+..
T Consensus 7 ~~~~~v~l~~~~~-~glG~~~~~~~~~----~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~ 81 (127)
T 1b8q_A 7 PNVISVRLFKRKV-GGLGFLVKERVSK----PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGI 81 (127)
T ss_dssp CCSEEEEEECTTT-SCCSCCEEECTTS----SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSC
T ss_pred CceEEEEEEeCCC-CcEeEEEEecCCC----CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3467889988853 6899999876542 5899999999999999993399999999999999999999999999987
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
+++.+.|
T Consensus 82 ~g~~v~l 88 (127)
T 1b8q_A 82 ASETHVV 88 (127)
T ss_dssp CSSCEEE
T ss_pred CCCeEEE
Confidence 6666654
No 319
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.33 E-value=8.3e-12 Score=103.14 Aligned_cols=77 Identities=32% Similarity=0.450 Sum_probs=66.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.+..+ .+|||++.++.+.. .+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+..
T Consensus 6 ~~~~~v~l~~~~~-~~lG~~i~~~~~~~---~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 81 (200)
T 2qt5_A 6 KGSTVVELMKKEG-TTLGLTVSGGIDKD---GKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNV 81 (200)
T ss_dssp EEEEEEEEECCTT-CCCCEEEECCTTSS---SCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTC
T ss_pred CCCEEEEEEeCCC-CCCCEEEecccCCC---CCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 3467788887764 79999999987653 5799999999999999945999999999999999999999999999865
Q ss_pred C
Q psy8436 299 F 299 (306)
Q Consensus 299 ~ 299 (306)
.
T Consensus 82 g 82 (200)
T 2qt5_A 82 G 82 (200)
T ss_dssp C
T ss_pred C
Confidence 3
No 320
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.33 E-value=7e-12 Score=95.45 Aligned_cols=84 Identities=29% Similarity=0.492 Sum_probs=66.5
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
..++.+.+.+.....+|||++....+... ..|++|..|.+++||+++|+|++||+|++|||+++. ++.++..+|+..
T Consensus 18 ~~~~~~~~~~~~~~~~lG~~~~~~~~~~~-~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~--~~~~~~~~l~~~ 94 (124)
T 1wh1_A 18 LELEEVDLYRMNSQDKLGLTVCYRTDDED-DIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQ--NREEAVALLTSE 94 (124)
T ss_dssp CEECCBCCCCSSTTCCCCEEEECCCCCSS-CCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCC--SHHHHHHHHTCS
T ss_pred ceEEEEEEEecCCCCcccEEEEecCCCCC-CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECC--CHHHHHHHHHhC
Confidence 44555666666544689999987654321 258999999999999999889999999999999997 478999999986
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
++..+.|
T Consensus 95 ~g~~v~l 101 (124)
T 1wh1_A 95 ENKNFSL 101 (124)
T ss_dssp SCCSCCE
T ss_pred CCCEEEE
Confidence 6665554
No 321
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.32 E-value=9.4e-12 Score=89.70 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=63.3
Q ss_pred eEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc--
Q psy8436 221 MFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-- 298 (306)
Q Consensus 221 ~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-- 298 (306)
...+.|.+.. .++||.+.... .+.+|.+|.+++||+++| |++||+|++|||.++...+++|++.+++++
T Consensus 18 ~~~l~l~~~~--~g~G~~l~~~~------~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~ 88 (101)
T 3qik_A 18 AKRLLILPQE--EDYGFDIEEKN------KAVVVKSVQRGSLAEVAG-LQVGRKIYSINEDLVFLRPFSEVESILNQSFC 88 (101)
T ss_dssp EEEEEECCCS--SSSSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred cCeEEEEeCC--CcccEEEEccC------CCeEEEEECCCCHHHHcC-CCCCCEEEEECCEEcCcCCHHHHHHHHHHhhc
Confidence 3466676663 68999997532 478999999999999999 999999999999999888999999999984
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
.++.+.|
T Consensus 89 ~g~~v~L 95 (101)
T 3qik_A 89 SRRPLRL 95 (101)
T ss_dssp TTCCEEE
T ss_pred cCCeEEE
Confidence 5665543
No 322
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.30 E-value=1.9e-11 Score=87.82 Aligned_cols=73 Identities=30% Similarity=0.404 Sum_probs=61.2
Q ss_pred EEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCC
Q psy8436 222 FTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQ 301 (306)
Q Consensus 222 ~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~ 301 (306)
+.|.+.+......|||.+. .|++|..|.++|+|+++|+|++||+|++|||.++.++++.++..+|++...
T Consensus 4 ~~v~~~~~~~~~~~g~~~~---------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~- 73 (92)
T 3cyy_A 4 TKVTLVKSAKNEEYGLRLA---------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG- 73 (92)
T ss_dssp EEEEEECSSTTSCCCEEEE---------EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT-
T ss_pred EEEEEEeCCCCCCCCEEEe---------CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-
Confidence 4566665544468999885 389999999999999998899999999999999999999999999988554
Q ss_pred cee
Q psy8436 302 SSK 304 (306)
Q Consensus 302 ~~~ 304 (306)
.+.
T Consensus 74 ~v~ 76 (92)
T 3cyy_A 74 KLK 76 (92)
T ss_dssp EEE
T ss_pred cEE
Confidence 443
No 323
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.30 E-value=9.4e-12 Score=102.36 Aligned_cols=70 Identities=37% Similarity=0.608 Sum_probs=60.1
Q ss_pred CcccEEEEcCCCC---CC--CCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 233 KSLGFSIVGGRDS---PK--GNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 233 ~~lG~~l~gg~~~---~~--~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
.+|||+|.|+.+. +. ...|+||..|.++|||++ | |++||+|++|||+++.+++|.+++.+|+.... .+.|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~-~v~l 76 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQN-TVEL 76 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-EEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEE
Confidence 5799999998752 21 346999999999999999 7 99999999999999999999999999998764 4443
No 324
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.29 E-value=9.5e-12 Score=112.86 Aligned_cols=77 Identities=36% Similarity=0.618 Sum_probs=67.2
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh-c
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD-I 298 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~-~ 298 (306)
..+.|.+.++. +|||++.++.+ .|+||..|.+||||+++| |++||+|++|||+++.++++++++.+|+. .
T Consensus 9 ~~~~v~~~k~~---~lG~~i~gg~~-----~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~ 79 (391)
T 3tsz_A 9 SMKLVKFRKGD---SVGLRLAGGND-----VGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIREEAVLFLLDLP 79 (391)
T ss_dssp CEEEEEEECCS---SCCEEEEEETT-----TEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTCCHHHHHHHHHHSC
T ss_pred CcEEEEeecCC---ceeEEEEecCC-----CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhhc
Confidence 45678888873 69999998775 599999999999999999 99999999999999999999999999998 4
Q ss_pred CCCceec
Q psy8436 299 FPQSSKL 305 (306)
Q Consensus 299 ~~~~~~l 305 (306)
++..+.|
T Consensus 80 ~g~~v~l 86 (391)
T 3tsz_A 80 KGEEVTI 86 (391)
T ss_dssp TTSEEEE
T ss_pred CCCeEEE
Confidence 5555554
No 325
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.26 E-value=2.3e-11 Score=87.11 Aligned_cols=76 Identities=25% Similarity=0.327 Sum_probs=60.7
Q ss_pred EEEEEEeCCC-CCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-C
Q psy8436 222 FTVTFQKGPG-QKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-F 299 (306)
Q Consensus 222 ~~v~l~k~~~-~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~ 299 (306)
..+.+.+.++ ...|||++.... .|++|..|.+++||+++| |++||+|++|||+++.+.++.++..+|+.. +
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~~~------~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKWDI------PGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYNDSKEWEEAMAKAQE 77 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTCHHHHHHHHHHHHH
T ss_pred eEEEEEecCCCCCcccEEEEecC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCCHHHHHHHHHhcCC
Confidence 4566666543 236999987432 489999999999999998 999999999999999888899999999864 3
Q ss_pred CCcee
Q psy8436 300 PQSSK 304 (306)
Q Consensus 300 ~~~~~ 304 (306)
+..+.
T Consensus 78 g~~v~ 82 (90)
T 2eaq_A 78 TGHLV 82 (90)
T ss_dssp HTEEE
T ss_pred CCEEE
Confidence 44443
No 326
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.26 E-value=3.5e-11 Score=92.11 Aligned_cols=75 Identities=32% Similarity=0.542 Sum_probs=62.7
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+++.+..... ..|||.+.++.+. ..|++|..|.+++||+++| |++||+|++|||+++.++++.+++..++..
T Consensus 19 g~~~~v~v~~~~~-~~lG~~~~~~~~~---~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 93 (128)
T 1uf1_A 19 GDEKKVNLVLGDG-RSLGLTIRGGAEY---GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILHDEAVRLLKSS 93 (128)
T ss_dssp SSEEEEEEECCSS-CCCCEEEECCTTT---TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCHHHHHHHHTTC
T ss_pred CcEEEEEEEECCC-CccCEEEECcccC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCHHHHHHHHhcC
Confidence 3456677765542 5799999886543 2589999999999999999 999999999999999999999999998874
No 327
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.26 E-value=4.6e-11 Score=83.56 Aligned_cols=64 Identities=30% Similarity=0.438 Sum_probs=56.0
Q ss_pred CCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 232 QKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 232 ~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
...|||.+. .|++|..|.++|+|+++|.|++||+|++|||.++.++++.++..+|++... .+.|
T Consensus 12 ~~~~g~~~~---------~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l 75 (81)
T 2rcz_A 12 NEEYGLRLA---------SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG-KLKM 75 (81)
T ss_dssp TCCCCEEEE---------EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTT-EEEE
T ss_pred CCCCCEEEe---------CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCC-eEEE
Confidence 367999886 379999999999999998899999999999999999999999999998654 4443
No 328
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.25 E-value=1.3e-11 Score=102.77 Aligned_cols=77 Identities=26% Similarity=0.495 Sum_probs=67.0
Q ss_pred cceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc
Q psy8436 219 LSMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI 298 (306)
Q Consensus 219 ~~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~ 298 (306)
...+.|.|.+.. .+|||.+.++.+. .|++|..|.++++|+++| |++||+|++|||+++.++++.+++.+|+..
T Consensus 8 ~~~r~v~l~k~~--~glG~~l~~~~~~----~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~~dl~~~l~~~ 80 (216)
T 2krg_A 8 LRPRLCTMKKGP--SGYGFNLHSDKSK----PGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQHGDVVSAIRAG 80 (216)
T ss_dssp CCCEEEEEECCS--SSSCEEECCCSSS----CSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCTHHHHHHHHHH
T ss_pred cceEEEEEEeCC--CCceEEEEecCCC----CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHHhc
Confidence 446788998885 6899999877643 489999999999999999 999999999999999999999999999887
Q ss_pred CCCce
Q psy8436 299 FPQSS 303 (306)
Q Consensus 299 ~~~~~ 303 (306)
+..+
T Consensus 81 -g~~v 84 (216)
T 2krg_A 81 -GDET 84 (216)
T ss_dssp -CSEE
T ss_pred -CCeE
Confidence 4444
No 329
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.24 E-value=3.5e-11 Score=96.33 Aligned_cols=78 Identities=23% Similarity=0.314 Sum_probs=67.1
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
.++.|.|.|.. ...|||++.... .|++|..|.+++||+++| |++||+|++|||+++.+++++.+..+++..+
T Consensus 4 ~~r~v~l~k~~-~~~lG~~~~~~~------~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~~~ 75 (166)
T 1w9e_A 4 DPREVILCKDQ-DGKIGLRLKSID------NGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQAF 75 (166)
T ss_dssp CCEEEEEECCT-TSCCSEEEEEET------TEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCEEEEEEeCC-CCcEeEEEEeCC------CCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 45789999975 368999998643 589999999999999998 9999999999999999999878888888877
Q ss_pred CCceec
Q psy8436 300 PQSSKL 305 (306)
Q Consensus 300 ~~~~~l 305 (306)
+..+.|
T Consensus 76 ~~~v~l 81 (166)
T 1w9e_A 76 GEKITM 81 (166)
T ss_dssp SSEEEE
T ss_pred CCEEEE
Confidence 766654
No 330
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.12 E-value=2.8e-11 Score=109.86 Aligned_cols=84 Identities=25% Similarity=0.332 Sum_probs=67.7
Q ss_pred ceEEEEEEeCCCCCcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 220 SMFTVTFQKGPGQKSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 220 ~~~~v~l~k~~~~~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
..+.|.+.|.++ ++|||+|.+..... ...+++|..|.++|||+++|+|++||+|++|||+++.+++|.+++.+|+..+
T Consensus 204 ~~~~V~i~k~~g-e~lG~~i~~~~~g~-~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~ 281 (388)
T 3suz_A 204 NCKELQLEKHKG-EILGVVVVESGWGS-ILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLK 281 (388)
T ss_dssp CCEEEEECCCSS-CCCCCCCBCC---C-CSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCT
T ss_pred cceEEEEECCCC-CceeEEEEecCCCC-cCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhcc
Confidence 456889988765 78999998743211 1236899999999999999999999999999999999999999999999884
Q ss_pred C-Cceec
Q psy8436 300 P-QSSKL 305 (306)
Q Consensus 300 ~-~~~~l 305 (306)
. ..+.|
T Consensus 282 ~~~~v~l 288 (388)
T 3suz_A 282 NQTQVKL 288 (388)
T ss_dssp TCSCEEE
T ss_pred CCCcccc
Confidence 4 33443
No 331
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.10 E-value=2.1e-10 Score=86.28 Aligned_cols=71 Identities=25% Similarity=0.333 Sum_probs=55.6
Q ss_pred CcccEEEEcCCCCCCCCCcEEEEEEcC--CChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 233 KSLGFSIVGGRDSPKGNLGIFVKTIFQ--SGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 233 ~~lG~~l~gg~~~~~~~~gi~V~~V~~--~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
+.+||.+....+......|++|..|.+ ++||+++| |++||+|++|||.++.+++|+++..+|+.. +..+.|
T Consensus 27 g~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l 99 (118)
T 2yub_A 27 CRRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQL 99 (118)
T ss_dssp SSCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEE
T ss_pred CCceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEE
Confidence 346666652221111125899999999 99999998 999999999999999999999999999987 555544
No 332
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.99 E-value=3e-10 Score=81.35 Aligned_cols=58 Identities=17% Similarity=0.285 Sum_probs=51.4
Q ss_pred CeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeEEEEEEeCCCC
Q psy8436 33 PYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--DSHVEIVICRNPDD 94 (306)
Q Consensus 33 gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~~~v~L~v~r~~~~ 94 (306)
|++|..|.++|||++ | |+.||+|++|||+.+. ++.+...+|+.. ++.|.|+|.|+...
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQ--SAEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCS--SHHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 688999999999999 8 9999999999999998 467888888875 77899999997643
No 333
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.95 E-value=4.2e-09 Score=76.73 Aligned_cols=58 Identities=16% Similarity=0.229 Sum_probs=50.6
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--DSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||++ | |+.||+|++|||+.+. ++.+...+|... +..+.|+|.|...
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~R~g~ 66 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFK--SSQEFIDYIHSKKVGDTVKINYKHGDK 66 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCS--SHHHHHHHHHTSCTTCEEEEEEEETTE
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 5899999999999995 8 9999999999999998 567888888763 6789999999754
No 334
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.92 E-value=2e-09 Score=77.50 Aligned_cols=58 Identities=10% Similarity=0.244 Sum_probs=51.3
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--DSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||++ | |+.||+|++|||+.+.+ ..+...+|+.. ++.+.|+|.|+..
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l~v~R~g~ 64 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRVTFIRDRK 64 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEEEEEETTE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEEEEEECCE
Confidence 5799999999999998 8 99999999999999984 67888888764 7799999999754
No 335
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.90 E-value=3.8e-09 Score=74.86 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=55.0
Q ss_pred ceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--CCeEEEEEEeCC
Q psy8436 17 ELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--DSHVEIVICRNP 92 (306)
Q Consensus 17 ~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~~~v~L~v~r~~ 92 (306)
.+|+...... +...|+.|..+.|+|||+++| |+.||+|++|||+.+. ++.+...+++.. +..+.|+|.|+.
T Consensus 6 ~~~~~p~~~~--g~~~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~--~~~d~~~~~~~~~~g~~v~l~v~R~g 78 (87)
T 2i6v_A 6 YVRLSQVKRD--DKVLGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLT--DPNVMNTLFQSMNEMTEMSLTVERDG 78 (87)
T ss_dssp TEEEEEEEET--TEEEEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETT--CHHHHHHHHHTGGGCSEEEEEEEETT
T ss_pred ccceEEEeeC--CeEEEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 3555554332 223478899999999999999 9999999999999998 456777777653 678999999875
No 336
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.90 E-value=4.7e-09 Score=78.26 Aligned_cols=58 Identities=22% Similarity=0.456 Sum_probs=52.3
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+. +..+...+++. ++.+.|+|.|+..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~ 92 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRE 92 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHHH-CSSEEEEEEETTE
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCE
Confidence 689999999999999999 9999999999999998 57888888887 5789999999753
No 337
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.85 E-value=1.2e-08 Score=78.55 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=58.6
Q ss_pred CceeEEEEecCC---------C---CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC--C
Q psy8436 16 NELGIYIERQDG---------G---AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK--D 81 (306)
Q Consensus 16 ~~lG~~i~gg~~---------~---~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~--~ 81 (306)
..||+.+..-.. + ....|++|..|.++|||+ +| |+.||+|++|||+.+.+ +.+...++... +
T Consensus 29 ~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g 104 (134)
T 2l97_A 29 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNHSIG 104 (134)
T ss_dssp CCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHSSTT
T ss_pred eEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhCCCC
Confidence 468888765322 0 013689999999999999 99 99999999999999984 56777777664 7
Q ss_pred CeEEEEEEeCCC
Q psy8436 82 SHVEIVICRNPD 93 (306)
Q Consensus 82 ~~v~L~v~r~~~ 93 (306)
+.+.|+|.|+..
T Consensus 105 ~~v~l~v~R~g~ 116 (134)
T 2l97_A 105 DTIKITYYRNGK 116 (134)
T ss_dssp CEEEEEEEETTE
T ss_pred CEEEEEEEECCE
Confidence 899999999754
No 338
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.83 E-value=9.6e-09 Score=74.05 Aligned_cols=57 Identities=16% Similarity=0.161 Sum_probs=49.0
Q ss_pred eEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-C-CeEEEEEEeCCC
Q psy8436 34 YLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-D-SHVEIVICRNPD 93 (306)
Q Consensus 34 i~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-~-~~v~L~v~r~~~ 93 (306)
-+|..|.++|||+++| |+.||+|++|||+.+. ++.++...|... + ..+.|+|.|...
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETP--DWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECS--SHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 4688999999999999 9999999999999998 567888777654 3 589999999763
No 339
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=76.00 Aligned_cols=58 Identities=28% Similarity=0.434 Sum_probs=50.9
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+. +..+....++ .+..+.|+|.|+..
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~-~g~~v~l~v~R~g~ 92 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLV--DSSELQEAVL-TESPLLLEVRRGND 92 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHH-HCSSEEEEEEETTE
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECC--CHHHHHHHHh-CCCeEEEEEEECCE
Confidence 589999999999999999 9999999999999998 5677777775 46789999998753
No 340
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.78 E-value=2.8e-08 Score=90.20 Aligned_cols=74 Identities=24% Similarity=0.507 Sum_probs=63.8
Q ss_pred CceeEEEEec-CCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-CCeEEEEEEeCCC
Q psy8436 16 NELGIYIERQ-DGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-DSHVEIVICRNPD 93 (306)
Q Consensus 16 ~~lG~~i~gg-~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-~~~v~L~v~r~~~ 93 (306)
.++|+.+... ... .+++|..|.++|||+++| |+.||+|++|||+++.+++..++..+|+.. +..|.|+|.|...
T Consensus 85 ~giG~~~~~~~~~~---~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 85 TGVGLEITYDGGSG---KDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp BBCSEEEEECTTCS---SCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEEEeecCC---CcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 4789998754 211 479999999999999999 999999999999999999989999999864 6789999998764
No 341
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.77 E-value=1.2e-08 Score=72.91 Aligned_cols=57 Identities=16% Similarity=0.334 Sum_probs=49.4
Q ss_pred eEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC-CCeEEEEEEeCCC
Q psy8436 34 YLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK-DSHVEIVICRNPD 93 (306)
Q Consensus 34 i~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-~~~v~L~v~r~~~ 93 (306)
++|..|.++|||+++| |+.||+|++|||+.+. ++.+....|+.. +..+.|+|.|+..
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~~~g~~v~l~v~R~g~ 63 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDGQPLT--QWVTFVMLVRDNPGXSLALEIERQGS 63 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETTEECC--CHHHHHHHHHHCTTCCEEEEEEETTE
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECCeEcC--CHHHHHHHHhcCCCCeEEEEEEECCe
Confidence 6788999999999999 9999999999999998 567888777754 6689999998753
No 342
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.71 E-value=5.7e-08 Score=71.32 Aligned_cols=58 Identities=14% Similarity=0.157 Sum_probs=47.5
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEeCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICRNP 92 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r~~ 92 (306)
.|++|..+.|++||+++| |+.||+|++|||+.+.++. +...+++. .++.+.|+|.|+.
T Consensus 37 ~G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g 96 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDG 96 (105)
T ss_dssp EEEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEEEEEETT
T ss_pred EEEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEEEEEECC
Confidence 467788888888999999 9999999999999999764 44455553 4678999999875
No 343
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.65 E-value=3.3e-08 Score=89.76 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=59.3
Q ss_pred CCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Q psy8436 15 SNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 15 ~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
..||||.+.....+...-.++|..|.++|||+++| |+.||+|++|||+++.++. +..+++..+..|+|+|.|...
T Consensus 73 ~~G~~~~l~~~~~~~~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 73 SYGFDYTLYKVLDNDTAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIGVYKEVV 147 (403)
T ss_dssp BCSEEEEEEECTTCSSCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEEEEEEEC
T ss_pred ccceEEEEEEcCCCCcceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEEEEeCCc
Confidence 45788887765433211137899999999999999 9999999999999999885 566677767789999998754
No 344
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.65 E-value=1.3e-07 Score=83.76 Aligned_cols=71 Identities=18% Similarity=0.281 Sum_probs=57.4
Q ss_pred ceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEe-CCC
Q psy8436 17 ELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICR-NPD 93 (306)
Q Consensus 17 ~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r-~~~ 93 (306)
.||+.+..... ..|++|..|.+++||+++| |+.||+|++|||+.+. ++.+...+++. .++.|.|+|.| +..
T Consensus 230 ~lGi~~~~~~~---~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 230 SLGVQVTNDKD---TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPIN--SADALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp ECCEEEESCSS---SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECC--SHHHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred ccceEeeeccC---CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 56776653221 2589999999999999999 9999999999999998 45677777765 47889999999 653
No 345
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.64 E-value=7e-08 Score=79.98 Aligned_cols=73 Identities=11% Similarity=0.171 Sum_probs=57.5
Q ss_pred CceeEEEEecCCC-CcCCCeEEEEeCCCChhcccCCCCC-CCEEEEECCEeCCCCCHHHHHHHHhcC-CCeEEEEEEeCC
Q psy8436 16 NELGIYIERQDGG-AHFSPYLISHIEPGGAIHRDGRFHV-GDELIKVNDKRLKGLTIQEAREALNNK-DSHVEIVICRNP 92 (306)
Q Consensus 16 ~~lG~~i~gg~~~-~~~~gi~V~~V~~gs~A~~~G~L~~-GD~Il~VNG~~l~~~~~~~a~~~l~~~-~~~v~L~v~r~~ 92 (306)
..|||++..-... ....|++|..|.++|||+++| |+. ||+|++|||+ +.+ +++...+++.. +..+.|+|.|..
T Consensus 95 ~~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~ing~-v~~--~~~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 95 GLLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGADTV-MNE--SEDLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp SSSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEESSC-CCS--SSCHHHHHHHTTTSCEEEEEEETT
T ss_pred CccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECCCE-eCC--HHHHHHHHHhCCCCeEEEEEEECC
Confidence 4689988753211 112589999999999999999 999 9999999998 764 46777777775 678999998864
No 346
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.61 E-value=1.5e-07 Score=71.28 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=49.3
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r~~~ 93 (306)
.|++|..|.+++||+++ |+.||+|++|||+.+. ++.+...+++. .++.+.|+| |+..
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~--~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTS--NLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECS--SHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 57999999999999988 9999999999999998 56788888874 477899999 7653
No 347
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.60 E-value=6.7e-08 Score=85.35 Aligned_cols=76 Identities=18% Similarity=0.316 Sum_probs=60.2
Q ss_pred CceeEEEEecCCC-------CcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEE
Q psy8436 16 NELGIYIERQDGG-------AHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEI 86 (306)
Q Consensus 16 ~~lG~~i~gg~~~-------~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L 86 (306)
..||+.+..-... ....|++|..|.++|||+++| |+.||+|++|||+.+. +..+...+|+. .++.|.|
T Consensus 221 ~~lGi~~~~~~~~~~~~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~--~~~~l~~~l~~~~~g~~v~l 297 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPV 297 (318)
T ss_dssp EECCEEEEECSCCCSSSSCSSSCCCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECC--CHHHHHHHHHTSCTTCEEEE
T ss_pred ccceeEeeecchhHHHhccCCCCCcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHHhcCCCCEEEE
Confidence 3577777542110 112589999999999999999 9999999999999998 46788888875 4779999
Q ss_pred EEEeCCCC
Q psy8436 87 VICRNPDD 94 (306)
Q Consensus 87 ~v~r~~~~ 94 (306)
+|.|+...
T Consensus 298 ~v~R~g~~ 305 (318)
T 1te0_A 298 VVMRDDKQ 305 (318)
T ss_dssp EEESSSCE
T ss_pred EEEECCEE
Confidence 99997643
No 348
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.60 E-value=1.3e-08 Score=72.71 Aligned_cols=51 Identities=20% Similarity=0.362 Sum_probs=43.6
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 251 GIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 251 gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
|++|..|.++|||++ | |++||+|++|||.++.+ ..++..+|+.. ++..+.|
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~~v~~--~~~l~~~l~~~~~g~~v~l 53 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGKNYQS--AEKLIDYISSKKAGDKVTL 53 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTBCCSS--HHHHHHHHSSCCSSCEECE
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCEECCC--HHHHHHHHHcCCCCCEEEE
Confidence 678999999999998 8 99999999999999975 57999999887 4555544
No 349
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.57 E-value=1.3e-07 Score=84.32 Aligned_cols=60 Identities=23% Similarity=0.422 Sum_probs=53.5
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEeCCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICRNPDD 94 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r~~~~ 94 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+. +..+...+++. .++.|.|+|.|+...
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~--~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 324 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLN--SFAELRSRIATTEPGTKVKLGLLRNGKP 324 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECS--CHHHHHHHHHTSCTTCEEEEEEEETTEE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 589999999999999999 9999999999999998 56788888876 478999999997643
No 350
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.56 E-value=1.5e-07 Score=68.36 Aligned_cols=52 Identities=25% Similarity=0.382 Sum_probs=43.4
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
.|++|..|.+++||++ | |++||+|++|||+++.+ ..++..+|... +++.+.|
T Consensus 7 ~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~~v~~--~~dl~~~l~~~~~g~~v~l 59 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-V-LHAGDLITEIDGNAFKS--SQEFIDYIHSKKVGDTVKI 59 (100)
T ss_dssp CCEEEEEECTTSGGGG-T-CCTTCEEEEETTBCCSS--HHHHHHHHHTSCTTCEEEE
T ss_pred CCEEEEEeCCCCchHH-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEE
Confidence 5899999999999995 6 99999999999999975 57888888875 3454443
No 351
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.55 E-value=1.7e-07 Score=85.01 Aligned_cols=68 Identities=16% Similarity=0.278 Sum_probs=57.5
Q ss_pred CcccEEEEcC-CCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 233 KSLGFSIVGG-RDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 233 ~~lG~~l~gg-~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
.++|+.+... .+ ..+++|..|.+++||+++| |++||+|++|||+++.+++..+++.+|+..++..+.|
T Consensus 85 ~giG~~~~~~~~~----~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l 153 (388)
T 1fc6_A 85 TGVGLEITYDGGS----GKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEV 153 (388)
T ss_dssp BBCSEEEEECTTC----SSCEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEE
T ss_pred EEEEEEEEEeecC----CCcEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEE
Confidence 5789988643 11 1489999999999999998 9999999999999999999999999998766666554
No 352
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.54 E-value=1.9e-07 Score=69.45 Aligned_cols=45 Identities=22% Similarity=0.407 Sum_probs=41.3
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
.|++|..|.++|||+++| |++||.|++|||+++.+ ..++..+|+.
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~ 79 (113)
T 2pzd_A 35 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT 79 (113)
T ss_dssp SCEEEEEEBTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHhC
Confidence 589999999999999999 99999999999999974 6788888876
No 353
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.53 E-value=8.7e-08 Score=68.29 Aligned_cols=52 Identities=21% Similarity=0.360 Sum_probs=43.9
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 251 GIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 251 gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
+++|..|.++++|+++| |++||+|++|||..+.+ +.++..+|+..+++.+.|
T Consensus 5 ~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~~~~g~~v~l 56 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAG-LQAGDRIVXVDGQPLTQ--WVTFVMLVRDNPGXSLAL 56 (91)
T ss_dssp -CBCSEECTTSHHHHTT-CCTTCEEEEETTEECCC--HHHHHHHHHHCTTCCEEE
T ss_pred CeEEEEECCCChHHhcC-CCCCCEEEEECCeEcCC--HHHHHHHHhcCCCCeEEE
Confidence 46789999999999998 99999999999999975 579998998776665544
No 354
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.53 E-value=7.6e-08 Score=69.12 Aligned_cols=52 Identities=23% Similarity=0.487 Sum_probs=44.5
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
.|++|..|.++|||++ | |++||+|++|||.++.+ ..++..+|+.. ++..+.|
T Consensus 5 ~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~~v~~--~~~l~~~l~~~~~g~~v~l 57 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQPINT--SEQIVSYVREKQAGDRVRV 57 (94)
T ss_dssp CCEECCCCCTTSTTBT-T-BCTTCEEEEETTBCCCC--HHHHHHHHHHSCTTCCEEE
T ss_pred CcEEEEEECCCChHHh-C-CCCCCEEEEECCEECCC--HHHHHHHHHhCCCCCEEEE
Confidence 5899999999999998 7 99999999999999975 57888899887 4555544
No 355
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.53 E-value=1.5e-07 Score=67.63 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=42.5
Q ss_pred EEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCC-Cceec
Q psy8436 252 IFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFP-QSSKL 305 (306)
Q Consensus 252 i~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~-~~~~l 305 (306)
.+|.+|.+++||+++| |++||+|++|||+.+.+ +.++...|..... +.+.|
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~d~~~~l~~~~~~~~v~l 55 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGIETPD--WDAVRLQLVDKIGDESTTI 55 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTEECSS--HHHHHHHHHHTTTCSEEEE
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHHhcCCCcEEE
Confidence 4689999999999998 99999999999999975 5788888877654 44443
No 356
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.52 E-value=2.1e-07 Score=85.67 Aligned_cols=60 Identities=25% Similarity=0.414 Sum_probs=54.8
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPDD 94 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~~ 94 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+. ++++..++++..+..+.|+|.|+...
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~~ 422 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRDRVN--SIAEMRKVLAAKPAIIALQIVRGNES 422 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHhCCCeEEEEEEECCEE
Confidence 489999999999999999 9999999999999998 57899999998878999999997643
No 357
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.52 E-value=9.2e-08 Score=67.64 Aligned_cols=53 Identities=23% Similarity=0.261 Sum_probs=42.7
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC-CCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF-PQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~-~~~~~l 305 (306)
.|+.|..+.++++|+++| |++||.|++|||.++.+ +.++..+++..+ ++.+.|
T Consensus 19 ~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~~v~~--~~d~~~~~~~~~~g~~v~l 72 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTD--PNVMNTLFQSMNEMTEMSL 72 (87)
T ss_dssp EEEEEEECSCHHHHHHTT-CCTTCEEEEETTEETTC--HHHHHHHHHTGGGCSEEEE
T ss_pred EEEEEEeCCCCCHHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEE
Confidence 378888988988999998 99999999999999975 467778887653 444443
No 358
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.48 E-value=3.3e-07 Score=81.13 Aligned_cols=58 Identities=22% Similarity=0.456 Sum_probs=52.5
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+. +.++...+|+. ++.+.|+|.|+..
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~--~~~~l~~~l~~-~~~v~l~v~R~g~ 313 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQ--NAEDVYEAVRT-QSQLAVQIRRGRE 313 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHHTT-CSSEEEEEEETTE
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcC--CHHHHHHHHhC-CCeEEEEEEECCE
Confidence 589999999999999999 9999999999999998 56888888877 5789999999764
No 359
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.47 E-value=2.3e-07 Score=71.23 Aligned_cols=52 Identities=13% Similarity=0.243 Sum_probs=44.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
.|++|..|.++|||+ +| |++||+|++|||.++.+ ..+...+|+.. ++..+.|
T Consensus 57 ~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~~v~~--~~~l~~~l~~~~~g~~v~l 109 (134)
T 2l97_A 57 SGVIVRSVQSNMPAN-GH-LEKYDVITKVDDKEIAS--STDLQSALYNHSIGDTIKI 109 (134)
T ss_dssp SCEEEEECSTTSGGG-TT-SCSSCEEEEETTEECCC--HHHHHHHHHHSSTTCEEEE
T ss_pred CCEEEEEECCCCchH-HC-CCCCCEEEEECCEEcCC--HHHHHHHHHhCCCCCEEEE
Confidence 589999999999999 88 99999999999999976 46888888876 4555544
No 360
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.47 E-value=2.4e-07 Score=85.57 Aligned_cols=59 Identities=19% Similarity=0.285 Sum_probs=54.1
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+. +.++...+|+..+..+.|+|.|...
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g~ 444 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANKKPVT--DVKSLQTIAQEKKKELLVQVLRGPG 444 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECC--SHHHHHHHTTSSCSCEEEEEEETTE
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhcCCCeEEEEEEECCE
Confidence 479999999999999999 9999999999999998 5689999999988899999999753
No 361
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.45 E-value=2.5e-07 Score=82.67 Aligned_cols=60 Identities=20% Similarity=0.354 Sum_probs=52.6
Q ss_pred CCeEEEEeCCCChhcccCCCCC-----------CCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEeCCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHV-----------GDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICRNPDD 94 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~-----------GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r~~~~ 94 (306)
.|++|..|.++|||+++| |+. ||+|++|||+.+.++ ++...+|.. .++.|+|+|.|+...
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 689999999999999999 999 999999999999955 677778854 378999999997653
No 362
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.44 E-value=4e-07 Score=86.82 Aligned_cols=71 Identities=14% Similarity=0.213 Sum_probs=57.1
Q ss_pred CCceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhc--CCCeEEEEEEeCC
Q psy8436 15 SNELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNN--KDSHVEIVICRNP 92 (306)
Q Consensus 15 ~~~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~--~~~~v~L~v~r~~ 92 (306)
..+||+.+.... .|++|..|.++|||+++| |++||+|++|||+.+.. .+...+|+. .++.|.|+|.|+.
T Consensus 484 ~~~lG~~~~~~~-----~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 484 RVNFGAKYKASP-----QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp SCCCSEEEEEET-----TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEEEEEETT
T ss_pred ccccceEEeccC-----CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEEEEEECC
Confidence 347899886542 369999999999999999 99999999999999953 345555654 4789999999976
Q ss_pred CC
Q psy8436 93 DD 94 (306)
Q Consensus 93 ~~ 94 (306)
..
T Consensus 555 ~~ 556 (597)
T 4fgm_A 555 EL 556 (597)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 363
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.38 E-value=7.1e-07 Score=66.13 Aligned_cols=44 Identities=25% Similarity=0.496 Sum_probs=39.7
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHh
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFK 296 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk 296 (306)
.|++|..|.+++||+++| |++||+|++|||+++.+ ..++..+|+
T Consensus 35 ~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~~~~~l~ 78 (112)
T 2p3w_A 35 SGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGRPLVD--SSELQEAVL 78 (112)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHH
T ss_pred CCeEEEEECCCChHHHCC-CCCCCEEEEECCEECCC--HHHHHHHHh
Confidence 589999999999999998 99999999999999975 578877775
No 364
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.29 E-value=9.7e-07 Score=64.63 Aligned_cols=52 Identities=21% Similarity=0.249 Sum_probs=40.9
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC-CCceec
Q psy8436 251 GIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIF-PQSSKL 305 (306)
Q Consensus 251 gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~-~~~~~l 305 (306)
|++|..+.|+++|+++| |++||+|++|||.++.++. ++..+++... +..+.|
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~~v~~~~--d~~~~~~~~~~g~~v~l 90 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSL 90 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTEETTSTT--HHHHHHHHHTTCSEEEE
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCeEEE
Confidence 67788888888889998 9999999999999998774 6667776643 444443
No 365
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.25 E-value=6.9e-07 Score=81.06 Aligned_cols=67 Identities=13% Similarity=0.254 Sum_probs=50.4
Q ss_pred CcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCceec
Q psy8436 233 KSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSSKL 305 (306)
Q Consensus 233 ~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~~l 305 (306)
.|+||++....+.. ....++|..|.++|||+++| |++||+|++|||+++.++. +..+|+. ++..+.|
T Consensus 74 ~G~~~~l~~~~~~~-~~~~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~~v~~~~---~~~~l~~-~g~~v~l 140 (403)
T 3k50_A 74 YGFDYTLYKVLDND-TAYNALISYVVPGSPAEEAG-LQRGHWIMMMNGDYITKKV---ESELLQG-STRQLQI 140 (403)
T ss_dssp CSEEEEEEECTTCS-SCEEEEEEEECTTSHHHHTT-CCTTCEEEEETTBCBCTTT---GGGGTSC-SCEEEEE
T ss_pred cceEEEEEEcCCCC-cceeEEEEEeCCCChHHHcC-CCCCCEEEEECCEEccchh---HHHHhhC-CCCEEEE
Confidence 56778776543211 01247899999999999999 9999999999999999884 5666766 5555544
No 366
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.22 E-value=2.7e-06 Score=64.29 Aligned_cols=52 Identities=25% Similarity=0.344 Sum_probs=43.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
.|++|..|.+++||+++ |++||+|++|||.++.+ +.++..+|+.. +++.+.|
T Consensus 25 ~gv~V~~V~~~spA~~a--L~~GD~Il~InG~~v~~--~~dl~~~l~~~~~g~~v~l 77 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV--LTPGLVIESINGMPTSN--LTTYSAALKTISVGEVINI 77 (125)
T ss_dssp CCEEEEEECSSSGGGGT--SCTTCEEEEETTEECSS--HHHHHHHHTTCCTTCEEEE
T ss_pred CceEEEEECCCChHHHh--cCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEE
Confidence 48999999999999987 99999999999999975 47888888753 4554443
No 367
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.20 E-value=1.8e-07 Score=83.16 Aligned_cols=59 Identities=19% Similarity=0.394 Sum_probs=0.0
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPDD 94 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~~ 94 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+. ++.+...+|+. +..|.|+|.|+...
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~--~~~~~~~~l~~-~~~v~l~v~R~g~~ 312 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVV--SANDVSDVIKR-ESTLNMVVRRGNED 312 (332)
T ss_dssp ---------------------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECC--CHHHHHHHHhC-CCeEEEEEEECCEE
Confidence 589999999999999999 9999999999999997 45677777775 67899999997643
No 368
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.19 E-value=4.4e-06 Score=73.83 Aligned_cols=66 Identities=20% Similarity=0.356 Sum_probs=51.2
Q ss_pred CcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 233 KSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 233 ~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
..||+.+..... ..|++|..|.+++||+++| |++||+|++|||.++.+ +.+...+|+.. ++..+.|
T Consensus 229 ~~lGi~~~~~~~----~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l 295 (324)
T 1y8t_A 229 ASLGVQVTNDKD----TLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDRPINS--ADALVAAVRSKAPGATVAL 295 (324)
T ss_dssp EECCEEEESCSS----SSSEEEEEECTTSTTTTTT-CCTTCEEEEETTEECCS--HHHHHHHHHTSCTTCEEEE
T ss_pred cccceEeeeccC----CCceEEEEECCCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEE
Confidence 357887754221 2589999999999999998 99999999999999976 46888888764 4454443
No 369
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.18 E-value=2.2e-07 Score=85.79 Aligned_cols=59 Identities=25% Similarity=0.428 Sum_probs=0.0
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHVEIVICRNPD 93 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v~L~v~r~~~ 93 (306)
.|++|..|.++|||+++| |+.||+|++|||+.+. ++++...+|+..+..+.|+|.|...
T Consensus 383 ~gv~V~~V~~gspA~~aG-L~~GDiI~~vng~~v~--~~~~l~~~l~~~~~~v~l~v~R~g~ 441 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NIAELRKVLDSKPSVLALNIQRGDS 441 (448)
T ss_dssp --------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcC-CCCCCEEEEECCEECC--CHHHHHHHHHcCCCeEEEEEEECCE
Confidence 479999999999999999 9999999999999998 5678888898876688999988754
No 370
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.13 E-value=3.4e-06 Score=75.14 Aligned_cols=53 Identities=28% Similarity=0.425 Sum_probs=45.7
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
.|++|.+|.++|||+++| |++||+|++|||+.+.+ ..+...+|+.. ++..+.|
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~~v~~--~~~l~~~l~~~~~g~~v~l 316 (345)
T 3stj_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGKPLNS--FAELRSRIATTEPGTKVKL 316 (345)
T ss_dssp SSEEEEEECTTSHHHHHT-CCTTCEECEETTEECSC--HHHHHHHHHTSCTTCEEEE
T ss_pred ceEEEEEeccCChHHHcC-CCCCCEEEEECCEECCC--HHHHHHHHHhcCCCCEEEE
Confidence 589999999999999999 99999999999999974 57888888875 4555544
No 371
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.10 E-value=4.7e-06 Score=73.47 Aligned_cols=53 Identities=21% Similarity=0.277 Sum_probs=45.4
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh-cCCCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD-IFPQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~-~~~~~~~l 305 (306)
.|++|..|.+++||+++| |++||+|++|||+++.+ ..+...+|+. .++..+.|
T Consensus 244 ~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~--~~~l~~~l~~~~~g~~v~l 297 (318)
T 1te0_A 244 QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPV 297 (318)
T ss_dssp CCEEEEEECTTSTTTTTC-CCTTCCEEEETTEECCC--HHHHHHHHHTSCTTCEEEE
T ss_pred CcEEEEEeCCCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHHhcCCCCEEEE
Confidence 589999999999999998 99999999999999975 5788888887 45555544
No 372
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.05 E-value=4.5e-06 Score=79.57 Aligned_cols=63 Identities=17% Similarity=0.270 Sum_probs=48.7
Q ss_pred CcccEEEEcCCCCCCCCCcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 233 KSLGFSIVGGRDSPKGNLGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 233 ~~lG~~l~gg~~~~~~~~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
..||+.+.... .|++|..|.++|||+++| |++||+|++|||..+.. .+...+|+.. ++..+.|
T Consensus 485 ~~lG~~~~~~~------~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~~v~~---~~l~~~l~~~~~g~~v~l 548 (597)
T 4fgm_A 485 VNFGAKYKASP------QGLDVLNVYHDESAYHAG-LSAGDKIIAIDHLQATE---QSVKRILERYIPGDTVTI 548 (597)
T ss_dssp CCCSEEEEEET------TEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCT---TTHHHHHTTCCTTCEEEE
T ss_pred cccceEEeccC------CeEEEEEeCCCChHHHCC-CCCCCEEEEECCEECCH---HHHHHHHHhcCCCCEEEE
Confidence 36888885432 489999999999999999 99999999999999943 4566666653 4445443
No 373
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.98 E-value=1e-05 Score=72.22 Aligned_cols=53 Identities=23% Similarity=0.383 Sum_probs=45.2
Q ss_pred CcEEEEEEcCCChhhhcCCCCC-----------CCEEEEECCEeCCCCCHHHHHHHHhhc-CCCceec
Q psy8436 250 LGIFVKTIFQSGQAAENEKLRE-----------GDEIIAINGVPLENKTHAEAIAMFKDI-FPQSSKL 305 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~-----------GD~Il~VNG~~v~~~~~~eav~~Lk~~-~~~~~~l 305 (306)
.|++|.+|.+++||+++| |++ ||+|++|||+++.++ ++...+|.+. ++..+.|
T Consensus 251 ~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l 315 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTV 315 (348)
T ss_dssp SSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEE
T ss_pred ceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEE
Confidence 599999999999999999 999 999999999999876 6888888654 4555554
No 374
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=97.97 E-value=1.4e-05 Score=70.55 Aligned_cols=45 Identities=22% Similarity=0.407 Sum_probs=41.2
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
.|++|.+|.+++||+++| |++||.|++|||+.+.+ .++...+|+.
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~~v~~--~~~l~~~l~~ 300 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQMVQN--AEDVYEAVRT 300 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECCS--HHHHHHHHTT
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCEEcCC--HHHHHHHHhC
Confidence 589999999999999999 99999999999999975 5788888876
No 375
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.82 E-value=3.9e-05 Score=78.12 Aligned_cols=70 Identities=13% Similarity=0.202 Sum_probs=58.1
Q ss_pred CCceeEEEEecCCCCcCCCeEEEEeCCC--------ChhcccCC-CCCCCEEEEECCEeCCCCCHHHHHHHHhcC-CCeE
Q psy8436 15 SNELGIYIERQDGGAHFSPYLISHIEPG--------GAIHRDGR-FHVGDELIKVNDKRLKGLTIQEAREALNNK-DSHV 84 (306)
Q Consensus 15 ~~~lG~~i~gg~~~~~~~gi~V~~V~~g--------s~A~~~G~-L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~-~~~v 84 (306)
..++|+.+.-.. .+++|..|.++ |||+++|. |+ ||+|++|||+++.++. ++..+|+.. +..|
T Consensus 736 ~~g~G~~~~~~~-----~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v 807 (1045)
T 1k32_A 736 SGRIACDFKLDG-----DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSA 807 (1045)
T ss_dssp CCBCSEEEEEET-----TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEE
T ss_pred cceecEEEEEeC-----CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEE
Confidence 348898886532 36999999998 99999994 89 9999999999999875 667777765 7789
Q ss_pred EEEEEeCC
Q psy8436 85 EIVICRNP 92 (306)
Q Consensus 85 ~L~v~r~~ 92 (306)
.|+|.|..
T Consensus 808 ~l~v~r~~ 815 (1045)
T 1k32_A 808 RIRLSGKG 815 (1045)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 99999865
No 376
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.61 E-value=8.3e-06 Score=72.29 Aligned_cols=45 Identities=24% Similarity=0.423 Sum_probs=0.0
Q ss_pred CcEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 250 LGIFVKTIFQSGQAAENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 250 ~gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
.|++|.+|.+++||+++| |++||+|++|||+++.++ .+...+|+.
T Consensus 254 ~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~--~~~~~~l~~ 298 (332)
T 3num_A 254 SGAYIIEVIPDTPAEAGG-LKENDVIISINGQSVVSA--NDVSDVIKR 298 (332)
T ss_dssp ------------------------------------------------
T ss_pred CceEEEEeccCCChHHcC-CCCCCEEEEECCEECCCH--HHHHHHHhC
Confidence 589999999999999998 999999999999999654 577777764
No 377
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.55 E-value=9.8e-05 Score=75.13 Aligned_cols=64 Identities=11% Similarity=0.085 Sum_probs=53.4
Q ss_pred CcccEEEEcCCCCCCCCCcEEEEEEcCC--------ChhhhcC-CCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCce
Q psy8436 233 KSLGFSIVGGRDSPKGNLGIFVKTIFQS--------GQAAENE-KLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSS 303 (306)
Q Consensus 233 ~~lG~~l~gg~~~~~~~~gi~V~~V~~~--------g~A~~~G-~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~ 303 (306)
.++|+.+.... .+++|..|.++ +||+++| .|+ ||+|++|||+++.++. +++.+|+..++..+
T Consensus 737 ~g~G~~~~~~~------~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~~~~~~g~~v 807 (1045)
T 1k32_A 737 GRIACDFKLDG------DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRVLSEKAGTSA 807 (1045)
T ss_dssp CBCSEEEEEET------TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHHHHTTTTSEE
T ss_pred ceecEEEEEeC------CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHhhcCCCCCEE
Confidence 57898886422 47999999998 9999998 499 9999999999999876 88899998777766
Q ss_pred ec
Q psy8436 304 KL 305 (306)
Q Consensus 304 ~l 305 (306)
.|
T Consensus 808 ~l 809 (1045)
T 1k32_A 808 RI 809 (1045)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 378
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.27 E-value=0.00061 Score=63.80 Aligned_cols=55 Identities=7% Similarity=0.032 Sum_probs=48.1
Q ss_pred CCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCC-eEEEEEE
Q psy8436 32 SPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDS-HVEIVIC 89 (306)
Q Consensus 32 ~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~-~v~L~v~ 89 (306)
.|++|+.|.++++|+..| ++.||+|++|||+.+. +.++..++|+++.+ .+.|.+.
T Consensus 415 ~gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~~V~--s~~~l~~~l~~~k~~~l~~~~~ 470 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYE-DMNNQQVLKFNGIPIR--NIHHLAHLIDMCKDKYLVFEFE 470 (539)
T ss_dssp CCEEEEEECCCGGGTTCS-SCCSEEEEEETTEECC--SHHHHHHHHHTCCSSEEEEEET
T ss_pred eEEEEEEecCCchhhhcC-CCCCCEEEeECCEEcC--CHHHHHHHHHHcCCCeEEEEEC
Confidence 589999999999999999 9999999999999999 57889999999855 4566553
No 379
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=72.03 E-value=4.8 Score=37.70 Aligned_cols=42 Identities=21% Similarity=0.374 Sum_probs=27.7
Q ss_pred ceeEEEEecCCCCcCCCeEEEEeCCCChhcccCCCCCCCEEEEECCEeCCC
Q psy8436 17 ELGIYIERQDGGAHFSPYLISHIEPGGAIHRDGRFHVGDELIKVNDKRLKG 67 (306)
Q Consensus 17 ~lG~~i~gg~~~~~~~gi~V~~V~~gs~A~~~G~L~~GD~Il~VNG~~l~~ 67 (306)
.+||.+.=..++ -+||.++.... + + +.+||+|++|||+++..
T Consensus 85 ~~Pf~vki~iDG----~i~V~dv~~~~-s---~-I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 85 YLPYTVQKSSDG----RFYFVDIMTFS-S---E-IRVGDELLEVDGAPVQD 126 (583)
T ss_dssp ECSEEEEECTTS----CEEEEEECSSC-C---S-SCTTCEEEEETTEEHHH
T ss_pred cCCeEEEEEECC----cEEEEeccccc-c---C-CCCCCEEEEECCccHHH
Confidence 456655423333 27887763322 2 4 99999999999998763
No 380
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=68.69 E-value=7.2 Score=36.52 Aligned_cols=29 Identities=28% Similarity=0.686 Sum_probs=21.8
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEEEECCEeCC
Q psy8436 251 GIFVKTIFQSGQAAENEKLREGDEIIAINGVPLE 284 (306)
Q Consensus 251 gi~V~~V~~~g~A~~~G~L~~GD~Il~VNG~~v~ 284 (306)
.+||..+..... + +..||+|++|||+++.
T Consensus 97 ~i~V~dv~~~~s----~-I~vGdEIlsING~pv~ 125 (583)
T 3dor_A 97 RFYFVDIMTFSS----E-IRVGDELLEVDGAPVQ 125 (583)
T ss_dssp CEEEEEECSSCC----S-SCTTCEEEEETTEEHH
T ss_pred cEEEEecccccc----C-CCCCCEEEEECCccHH
Confidence 478877643222 3 9999999999999873
No 381
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=41.59 E-value=28 Score=25.63 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=22.8
Q ss_pred CceeEEEEecCCCC-cCCCeEEEEeCCCChhcccCCCCCCCEEE
Q psy8436 16 NELGIYIERQDGGA-HFSPYLISHIEPGGAIHRDGRFHVGDELI 58 (306)
Q Consensus 16 ~~lG~~i~gg~~~~-~~~gi~V~~V~~gs~A~~~G~L~~GD~Il 58 (306)
.||||-...+.+.. ...-|||+ .+...+-| |+.||.|.
T Consensus 60 dG~GFlr~~~~~y~~~~~DiyVs----~~~irrf~-lr~GD~V~ 98 (130)
T 1a62_A 60 DGFGFLRSADSSYLAGPDDIYVS----PSQIRRFN-LRTGDTIS 98 (130)
T ss_dssp TSCEEEECGGGTTCCCTTCEEEC----HHHHHHTT-CCTTCEEE
T ss_pred CCeEEEecCCcCCCCCCCCEEEC----HHHHhHhC-CCCCCEEE
Confidence 48999887631111 01248883 34444447 99999875
No 382
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=36.96 E-value=22 Score=26.48 Aligned_cols=24 Identities=17% Similarity=0.263 Sum_probs=19.1
Q ss_pred cEEEEEEcCCChhhhcCCCCCCCEEE
Q psy8436 251 GIFVKTIFQSGQAAENEKLREGDEII 276 (306)
Q Consensus 251 gi~V~~V~~~g~A~~~G~L~~GD~Il 276 (306)
.-||-++. .|.+++.| |++||+|.
T Consensus 102 a~~VLEl~-aG~~~~~g-i~~Gd~v~ 125 (136)
T 3pjy_A 102 VAYVLELN-AGTVKRLG-VSPGDRLE 125 (136)
T ss_dssp EEEEEEEE-TTHHHHHT-CCTTCEEE
T ss_pred eeEEEEeC-cChHHhcC-CCCCCEEE
Confidence 46899985 56777778 99999985
No 383
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=36.12 E-value=26 Score=26.00 Aligned_cols=29 Identities=17% Similarity=0.077 Sum_probs=20.6
Q ss_pred hhcCCCCCCCEEEEECCEeCCCCCHHHHHHHHhh
Q psy8436 264 AENEKLREGDEIIAINGVPLENKTHAEAIAMFKD 297 (306)
Q Consensus 264 ~~~G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~ 297 (306)
.-..++++|..|+||.|++ .+.|.+.|+.
T Consensus 92 ~wva~Vk~G~ilfEi~gv~-----~~~A~eAlr~ 120 (135)
T 3bbo_O 92 YWVAVVKPGRILYEISGVA-----ENIARRAVAI 120 (135)
T ss_dssp CCCCCCCTTCEEEEECSSC-----TTHHHHHHHH
T ss_pred EEEEEECCCCEEEEEecCC-----HHHHHHHHHH
Confidence 3334699999999999933 3566666654
No 384
>3m7a_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG; HET: MSE; 1.22A {Novosphingobium aromaticivorans}
Probab=34.37 E-value=25 Score=26.27 Aligned_cols=23 Identities=30% Similarity=0.397 Sum_probs=18.2
Q ss_pred EEEEEEcCCChhhhcCCCCCCCEEE
Q psy8436 252 IFVKTIFQSGQAAENEKLREGDEII 276 (306)
Q Consensus 252 i~V~~V~~~g~A~~~G~L~~GD~Il 276 (306)
-||-++. .|.+++.| |++||+|.
T Consensus 117 ~~VLEl~-aG~~~~~g-i~~Gd~v~ 139 (140)
T 3m7a_A 117 LAVLEIN-GGLAARLG-IKPGDKVE 139 (140)
T ss_dssp SEEEEEE-TTHHHHHT-CCTTCEEE
T ss_pred cEEEEeC-cChHHHcC-CCCCCEEe
Confidence 5888975 46777778 99999984
No 385
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=32.89 E-value=27 Score=28.25 Aligned_cols=45 Identities=31% Similarity=0.427 Sum_probs=30.5
Q ss_pred hcccCCCCCCCEEEEECCEeCCCCCHH---HHHHHHhcC-CCeEEEEEEe
Q psy8436 45 IHRDGRFHVGDELIKVNDKRLKGLTIQ---EAREALNNK-DSHVEIVICR 90 (306)
Q Consensus 45 A~~~G~L~~GD~Il~VNG~~l~~~~~~---~a~~~l~~~-~~~v~L~v~r 90 (306)
+.++| +++|..+++|||.++.+...+ ++...|-.. ...+.|....
T Consensus 52 ~~~d~-~~~~~~~~~~ng~~~~~~~~~d~~~v~~~iigk~N~PLyir~f~ 100 (219)
T 2j3t_D 52 GQRDG-IRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGR 100 (219)
T ss_dssp CCCTT-CCTTCEEEEETTEECBTTBCTTSSBHHHHTTCGGGCSEEEEEEC
T ss_pred cccCC-ccccceeeecCCccCCCcccccCceeeeeeecCCCCceEEEecC
Confidence 46788 999999999999999986333 344444333 3356666554
No 386
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=31.79 E-value=19 Score=24.98 Aligned_cols=21 Identities=29% Similarity=0.377 Sum_probs=15.7
Q ss_pred cCCChhhhcCCCCCCCEEEEECC
Q psy8436 258 FQSGQAAENEKLREGDEIIAING 280 (306)
Q Consensus 258 ~~~g~A~~~G~L~~GD~Il~VNG 280 (306)
.-+|+|++. .++||+|+=+.=
T Consensus 44 ~lNGAAArl--~~~GD~vII~aY 64 (97)
T 1uhe_A 44 CVNGAAARK--VAIGDVVIILAY 64 (97)
T ss_dssp EEEGGGGGG--CCTTCEEEEEEE
T ss_pred EEchHHHcc--CCCCCEEEEEEC
Confidence 347899885 799999885543
No 387
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=31.16 E-value=19 Score=24.93 Aligned_cols=20 Identities=30% Similarity=0.414 Sum_probs=15.1
Q ss_pred CCChhhhcCCCCCCCEEEEECC
Q psy8436 259 QSGQAAENEKLREGDEIIAING 280 (306)
Q Consensus 259 ~~g~A~~~G~L~~GD~Il~VNG 280 (306)
-+|+|++. .++||+|+=+.=
T Consensus 47 lNGAAArl--~~~GD~vII~aY 66 (96)
T 1vc3_B 47 INGAAAHL--VKPGDLVILVAY 66 (96)
T ss_dssp EEGGGGGT--CCTTCEEEEEEE
T ss_pred EchHHHcc--CCCCCEEEEEEC
Confidence 36889874 799999885543
No 388
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=30.95 E-value=20 Score=25.11 Aligned_cols=19 Identities=32% Similarity=0.482 Sum_probs=14.9
Q ss_pred CCChhhhcCCCCCCCEEEEEC
Q psy8436 259 QSGQAAENEKLREGDEIIAIN 279 (306)
Q Consensus 259 ~~g~A~~~G~L~~GD~Il~VN 279 (306)
-+|+||+. .++||+|+=+-
T Consensus 46 lNGAAArl--~~~GD~vII~a 64 (102)
T 3plx_B 46 LNGAAARL--AEVGDKVIIMS 64 (102)
T ss_dssp EEGGGGGG--CCTTCEEEEEE
T ss_pred eCcHHHhc--cCCCCEEEEEE
Confidence 46899885 79999987554
No 389
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A*
Probab=29.77 E-value=50 Score=25.97 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=28.0
Q ss_pred CCCCCEEEEECCEeCCC-CCHHHHHHHHhhcCCCcee
Q psy8436 269 LREGDEIIAINGVPLEN-KTHAEAIAMFKDIFPQSSK 304 (306)
Q Consensus 269 L~~GD~Il~VNG~~v~~-~~~~eav~~Lk~~~~~~~~ 304 (306)
+--.|+++.+||.-+.- .+.++|.++|+...++.-.
T Consensus 66 VigaDTvV~~~g~ilgKP~~~~eA~~mL~~lsG~~h~ 102 (189)
T 1ex2_A 66 VIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHS 102 (189)
T ss_dssp EEEEEEEEEETTEEECCCSSHHHHHHHHHHHTTSEEE
T ss_pred EEEeCeEEEECCEEcCCCCCHHHHHHHHHHhCCCcEE
Confidence 44468888899987665 6899999999998776543
No 390
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=29.48 E-value=33 Score=24.76 Aligned_cols=28 Identities=11% Similarity=0.313 Sum_probs=21.6
Q ss_pred CCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 268 KLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 268 ~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
++++|..|+||.|. .+.+.|.+.|+.+.
T Consensus 83 ~Vk~G~ilfEi~g~----~~~~~a~eAlr~a~ 110 (118)
T 2ftc_I 83 PVKAGRLVVEMGGR----CEFEEVQGFLDQVA 110 (118)
T ss_pred EECCCCEEEEEecc----CCHHHHHHHHHHHH
Confidence 47889999999992 45678888887643
No 391
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=29.45 E-value=67 Score=23.84 Aligned_cols=24 Identities=25% Similarity=0.188 Sum_probs=18.7
Q ss_pred CCChhcccCCCCCCCEEEEECCEeCC
Q psy8436 41 PGGAIHRDGRFHVGDELIKVNDKRLK 66 (306)
Q Consensus 41 ~gs~A~~~G~L~~GD~Il~VNG~~l~ 66 (306)
-+|+|++. .++||+|+=+.-..+.
T Consensus 88 lNGAAArl--~~~GD~VII~sYa~~~ 111 (143)
T 1pqh_A 88 VNGAAAHC--ASVGDIVIIASFVTMP 111 (143)
T ss_dssp CCGGGGGT--CCTTCEEEEEEEEEEE
T ss_pred echHHHcc--CCCCCEEEEEECccCC
Confidence 47888776 7999999987766653
No 392
>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} SCOP: c.51.4.2
Probab=28.65 E-value=52 Score=26.32 Aligned_cols=36 Identities=6% Similarity=-0.001 Sum_probs=27.6
Q ss_pred CCCCCEEEEECCEeCCC-CCHHHHHHHHhhcCCCcee
Q psy8436 269 LREGDEIIAINGVPLEN-KTHAEAIAMFKDIFPQSSK 304 (306)
Q Consensus 269 L~~GD~Il~VNG~~v~~-~~~~eav~~Lk~~~~~~~~ 304 (306)
+--.|+|+.+||.-+.- .+.++|.++|+...++.-.
T Consensus 85 VIgaDTvV~~~g~IlgKP~~~e~A~~mL~~lsG~~h~ 121 (207)
T 2amh_A 85 ALTFDQVVVKGDEVREKPLSTEQCRSFIASYSGGGVR 121 (207)
T ss_dssp EEEEEEEEEETTEEECSCSSHHHHHHHHHHHTTSEEE
T ss_pred EEEECeEEEECCEEcCCCCCHHHHHHHHHHhCCCcEE
Confidence 34458888888887665 6799999999998776543
No 393
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens}
Probab=27.76 E-value=55 Score=26.66 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=27.5
Q ss_pred CCCCCEEEEECCEeCCC-CCHHHHHHHHhhcCCCce
Q psy8436 269 LREGDEIIAINGVPLEN-KTHAEAIAMFKDIFPQSS 303 (306)
Q Consensus 269 L~~GD~Il~VNG~~v~~-~~~~eav~~Lk~~~~~~~ 303 (306)
+--.|.|+.+||.-+.- .+.++|.++|+...++.-
T Consensus 75 VIgaDTvV~~dg~IlgKP~d~eeA~~mL~~lSG~~h 110 (230)
T 2p5x_A 75 VIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREH 110 (230)
T ss_dssp EEEEEEEEEETTEEECCCSSHHHHHHHHHHHTTSEE
T ss_pred EEEeCeEEEECCEEecCCCCHHHHHHHHHHhCCCcE
Confidence 34458888889887665 689999999999877654
No 394
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=26.74 E-value=55 Score=23.32 Aligned_cols=22 Identities=23% Similarity=0.505 Sum_probs=16.2
Q ss_pred CChhcccCCCCCCCEEEEECCEeC
Q psy8436 42 GGAIHRDGRFHVGDELIKVNDKRL 65 (306)
Q Consensus 42 gs~A~~~G~L~~GD~Il~VNG~~l 65 (306)
+|+|++. .++||+|+=+.-..+
T Consensus 75 NGAAAr~--~~~GD~vII~ay~~~ 96 (114)
T 3oug_A 75 NGPAARR--CEIGDQLFIISYTQV 96 (114)
T ss_dssp EGGGGGG--CCTTCEEEEEEEEEE
T ss_pred CCHHHhc--cCCCCEEEEEECCcC
Confidence 6888776 799999986654444
No 395
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=26.43 E-value=36 Score=27.49 Aligned_cols=23 Identities=26% Similarity=0.640 Sum_probs=20.0
Q ss_pred hhhcCCCCCCCEEEEECCEeCCCC
Q psy8436 263 AAENEKLREGDEIIAINGVPLENK 286 (306)
Q Consensus 263 A~~~G~L~~GD~Il~VNG~~v~~~ 286 (306)
+.++| +..|..+++|||.++.+.
T Consensus 52 ~~~d~-~~~~~~~~~~ng~~~~~~ 74 (219)
T 2j3t_D 52 GQRDG-IRVGHAVLAINGMDVNGR 74 (219)
T ss_dssp CCCTT-CCTTCEEEEETTEECBTT
T ss_pred cccCC-ccccceeeecCCccCCCc
Confidence 44577 999999999999999875
No 396
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=25.61 E-value=63 Score=23.89 Aligned_cols=34 Identities=18% Similarity=0.099 Sum_probs=24.8
Q ss_pred CChhcccCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcC
Q psy8436 42 GGAIHRDGRFHVGDELIKVNDKRLKGLTIQEAREALNNK 80 (306)
Q Consensus 42 gs~A~~~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~ 80 (306)
|+|-.-.-++++|..|++|.|. +.+.|.++|+.+
T Consensus 88 G~~~~wva~Vk~G~ilfEi~gv-----~~~~A~eAlr~a 121 (135)
T 3bbo_O 88 GSPEYWVAVVKPGRILYEISGV-----AENIARRAVAIA 121 (135)
T ss_dssp SCSSCCCCCCCTTCEEEEECSS-----CTTHHHHHHHHH
T ss_pred CCceEEEEEECCCCEEEEEecC-----CHHHHHHHHHHH
Confidence 4455555569999999999993 346777777765
No 397
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=23.90 E-value=48 Score=26.25 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=32.2
Q ss_pred CCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCce
Q psy8436 267 EKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSS 303 (306)
Q Consensus 267 G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~ 303 (306)
|.+..|.+||=|+++-..|.|..+++++|++.....+
T Consensus 106 g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v 142 (205)
T 2wns_A 106 GTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVT 142 (205)
T ss_dssp SCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCC
T ss_pred CCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEE
Confidence 3466899999999999999999999999999876654
No 398
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=23.68 E-value=47 Score=27.09 Aligned_cols=37 Identities=5% Similarity=0.162 Sum_probs=32.5
Q ss_pred CCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCce
Q psy8436 267 EKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSS 303 (306)
Q Consensus 267 G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~ 303 (306)
|.+..|+++|=|+++-..|-|..+++++|++.....+
T Consensus 132 g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv 168 (234)
T 3m3h_A 132 GKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVL 168 (234)
T ss_dssp SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEE
T ss_pred cccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEE
Confidence 4578999999999999999999999999999876544
No 399
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=21.93 E-value=53 Score=26.95 Aligned_cols=37 Identities=11% Similarity=0.153 Sum_probs=32.4
Q ss_pred CCCCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCce
Q psy8436 267 EKLREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSS 303 (306)
Q Consensus 267 G~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~ 303 (306)
|.+..|+++|=|+++-..|-|..+++++|++.....+
T Consensus 144 g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv 180 (243)
T 3dez_A 144 GRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVL 180 (243)
T ss_dssp SCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEE
T ss_pred eccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEE
Confidence 4578999999999999999999999999999876543
No 400
>3r8s_M 50S ribosomal protein L16; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ...
Probab=20.90 E-value=31 Score=25.67 Aligned_cols=27 Identities=22% Similarity=0.295 Sum_probs=21.6
Q ss_pred CCCCCCEEEEECCEeCCCCCHHHHHHHHhhcC
Q psy8436 268 KLREGDEIIAINGVPLENKTHAEAIAMFKDIF 299 (306)
Q Consensus 268 ~L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~ 299 (306)
++++|..|+||.|+ +.+.|.+.|+.+.
T Consensus 95 ~Vk~G~ilfEi~g~-----~~~~A~eAlr~a~ 121 (136)
T 3r8s_M 95 LIQPGKVLYEMDGV-----PEELAREAFKLAA 121 (136)
T ss_dssp EECTTCEEEEEESS-----CHHHHHHHHHHHH
T ss_pred EECCCCEEEEEeCC-----CHHHHHHHHHHHH
Confidence 38999999999994 5678888887643
No 401
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=20.70 E-value=1e+02 Score=25.10 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=32.9
Q ss_pred cCCCCCCCEEEEECCEeCCCCCHHHHHHHHhcCCCeE
Q psy8436 48 DGRFHVGDELIKVNDKRLKGLTIQEAREALNNKDSHV 84 (306)
Q Consensus 48 ~G~L~~GD~Il~VNG~~l~~~~~~~a~~~l~~~~~~v 84 (306)
.|.+..|++||=|++.--.+-|...++++|+..|..+
T Consensus 131 ~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~v 167 (234)
T 3m3h_A 131 EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEV 167 (234)
T ss_dssp ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEE
T ss_pred ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEE
Confidence 3557899999999999999999999999999997653
No 402
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=20.04 E-value=59 Score=25.26 Aligned_cols=35 Identities=9% Similarity=0.325 Sum_probs=30.9
Q ss_pred CCCCCEEEEECCEeCCCCCHHHHHHHHhhcCCCce
Q psy8436 269 LREGDEIIAINGVPLENKTHAEAIAMFKDIFPQSS 303 (306)
Q Consensus 269 L~~GD~Il~VNG~~v~~~~~~eav~~Lk~~~~~~~ 303 (306)
+..|.+||=|+++-..|.|..+++++|++.....+
T Consensus 123 ~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V 157 (190)
T 2dy0_A 123 IKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVA 157 (190)
T ss_dssp CCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEE
T ss_pred cCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEE
Confidence 46899999999999999999999999998876554
Done!