Query psy8438
Match_columns 270
No_of_seqs 180 out of 1611
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 18:50:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8438.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8438hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x9d_A Endoplasmic reticulum m 100.0 4.3E-67 1.5E-71 497.8 10.6 262 1-270 112-464 (538)
2 2ri9_A Mannosyl-oligosaccharid 100.0 1E-66 3.5E-71 491.8 9.5 266 1-270 29-400 (475)
3 1nxc_A Mannosyl-oligosaccharid 100.0 3E-66 1E-70 488.5 11.1 261 1-270 44-398 (478)
4 1hcu_A Alpha-1,2-mannosidase; 100.0 4.9E-66 1.7E-70 489.7 8.6 267 1-270 39-419 (503)
5 1dl2_A Class I alpha-1,2-manno 100.0 3.2E-65 1.1E-69 484.4 7.1 265 1-270 29-423 (511)
6 1x9d_A Endoplasmic reticulum m 100.0 3.6E-30 1.2E-34 244.7 6.0 163 104-269 83-264 (538)
7 1nxc_A Mannosyl-oligosaccharid 100.0 1.5E-29 5.1E-34 238.6 5.3 160 107-269 18-202 (478)
8 1hcu_A Alpha-1,2-mannosidase; 100.0 1.3E-29 4.6E-34 240.2 4.6 159 106-269 12-205 (503)
9 2ri9_A Mannosyl-oligosaccharid 100.0 2.2E-29 7.5E-34 237.5 5.6 159 107-269 3-191 (475)
10 1dl2_A Class I alpha-1,2-manno 100.0 2E-29 6.9E-34 239.2 3.8 160 107-269 3-202 (511)
11 2ahf_A Unsaturated glucuronyl 92.1 0.15 5E-06 46.5 4.8 32 62-93 43-74 (377)
12 2zzr_A Unsaturated glucuronyl 88.8 0.48 1.6E-05 43.4 5.2 31 62-92 69-99 (397)
13 3pmm_A Putative cytoplasmic pr 87.3 0.075 2.6E-06 48.5 -1.2 67 196-267 71-137 (382)
14 1nc5_A Hypothetical protein YT 86.4 0.24 8.2E-06 44.7 1.7 74 194-268 42-115 (373)
15 1nc5_A Hypothetical protein YT 81.7 2.6 8.7E-05 37.9 6.4 113 151-269 46-172 (373)
16 2ahf_A Unsaturated glucuronyl 67.2 3.3 0.00011 37.5 3.1 111 155-268 51-176 (377)
17 3k7x_A LIN0763 protein; Q92DQ0 61.2 3.4 0.00012 36.9 1.9 115 152-269 52-179 (349)
18 1wgn_A UBAP1, ubiquitin associ 60.4 8.9 0.00031 25.3 3.3 32 16-47 16-59 (63)
19 2zbl_A Putative isomerase; N-a 57.0 4.1 0.00014 37.1 1.8 27 243-269 319-345 (421)
20 3pmm_A Putative cytoplasmic pr 51.7 7.7 0.00026 35.0 2.7 25 245-269 73-97 (382)
21 3gt5_A N-acetylglucosamine 2-e 51.5 5.7 0.00019 35.9 1.8 32 62-93 53-84 (402)
22 2cos_A Serine/threonine protei 47.1 14 0.00049 23.6 2.6 22 23-44 13-47 (54)
23 3k7x_A LIN0763 protein; Q92DQ0 45.3 8.7 0.0003 34.2 1.9 25 245-269 218-242 (349)
24 1fp3_A N-acyl-D-glucosamine 2- 44.5 8.5 0.00029 34.4 1.8 25 244-268 318-342 (402)
25 2gz6_A N-acetyl-D-glucosamine 44.5 8.6 0.00029 34.1 1.8 25 244-268 308-332 (388)
26 2zzr_A Unsaturated glucuronyl 41.9 11 0.00037 34.3 2.0 22 247-268 75-96 (397)
27 2v8i_A Pectate lyase; periplas 32.7 16 0.00054 34.0 1.5 22 248-269 66-87 (543)
28 1q02_A Sequestosome 1; helical 31.6 16 0.00053 23.2 0.9 17 19-35 10-26 (52)
29 3gt5_A N-acetylglucosamine 2-e 30.4 21 0.0007 32.1 1.9 25 245-269 178-202 (402)
30 1nvp_D Transcription initiatio 28.4 40 0.0014 24.8 2.8 29 15-43 10-47 (108)
31 3epy_A Acyl-COA-binding domain 27.8 15 0.0005 26.0 0.3 16 29-44 2-17 (89)
32 3k11_A Putative glycosyl hydro 26.3 29 0.00098 32.0 2.1 23 245-267 87-109 (445)
33 1nh2_D Transcription initiatio 26.0 46 0.0016 24.9 2.8 29 15-43 14-51 (121)
34 2gz6_A N-acetyl-D-glucosamine 25.0 29 0.001 30.5 1.9 69 201-269 180-267 (388)
35 3e7j_A Heparinase II protein; 22.8 42 0.0014 33.1 2.7 24 246-269 85-108 (749)
36 3a0o_A Oligo alginate lyase; a 22.5 42 0.0014 32.8 2.6 26 244-269 210-235 (776)
37 2ekk_A UBA domain from E3 ubiq 21.1 69 0.0024 19.2 2.5 23 20-44 10-32 (47)
38 2zbl_A Putative isomerase; N-a 20.8 42 0.0015 30.2 2.1 25 245-269 177-201 (421)
39 3e6u_A LANC-like protein 1; al 20.1 41 0.0014 30.3 1.9 22 248-269 83-104 (411)
No 1
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=100.00 E-value=4.3e-67 Score=497.82 Aligned_cols=262 Identities=39% Similarity=0.624 Sum_probs=198.7
Q ss_pred CcccCcCCCCCCCCchhhHhhHHHHHHHhCCcHHHHHHHHHHHhhcCCCCCCCCcccchhhhHHHhhcccccccccccch
Q psy8438 1 MLKPLSKSAHKWFGLGLTIVDSLDTMWIMGLHDEFTEASGWVRDEFRPSLESSTADVNLFEATIRVLGGLLSAYHFSADD 80 (270)
Q Consensus 1 ~l~P~s~~~~~~~g~~~t~vdsldtl~im~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~fe~~ir~lggllsay~ls~~~ 80 (270)
||+|+||+++|+||.|+||||||||||||||++||++|++||+++++|+ .+..|||||||||+||||||||+||+|+
T Consensus 112 EL~PlS~~g~d~fg~g~TLVDSLDTL~IMgl~~EF~~A~~~V~~~~~f~---~d~~VsvFETtIR~LGGLLSAy~Lsgd~ 188 (538)
T 1x9d_A 112 ELKPVSRSFSEWFGLGLTLIDALDTMWILGLRKEFEEARKWVSKKLHFE---KDVDVNLFESTIRILGGLLSAYHLSGDS 188 (538)
T ss_dssp EEETTTTEEECSSSSCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---SSCEEEHHHHHHHHHHHHHHHHHHHCCH
T ss_pred ccccCCCCcccccCCceeeeeccceeeecCCHHHHHHHHHHHHHhcCCC---CCceeehhheehhhhhhhhhHHHhcCCH
Confidence 6899999999999889999999999999999999999999999988875 4689999999999999999999999999
Q ss_pred HHHHHhhhhcCCC-----CCCCCCcc-----------------------------------cccchhHHHHHHHHHHHHh
Q psy8438 81 LFISKALDIGDIG-----SNSIKPIY-----------------------------------FSKQTNARQRAVVDAFRHA 120 (270)
Q Consensus 81 ~~l~ka~~~~~~l-----~~~~~p~~-----------------------------------~t~~~~~~~~av~~~f~~~ 120 (270)
+||+||++|||+| ||+++|+. +||+++|.+ ++..+++..
T Consensus 189 ~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~~Y~~-~a~r~~~~l 267 (538)
T 1x9d_A 189 LFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKKFQE-AVEKVTQHI 267 (538)
T ss_dssp HHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCTHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCCcHHHH-HHHHHHHHH
Confidence 9999999999986 67888852 255555544 344555555
Q ss_pred HhhhhccccccccccccccCCC------c-ccCccc---eecchhhHHHHhCC------hHHHHHHHHHHHHhcCCCC--
Q psy8438 121 WSAYKKYAWGQDMLKPLSKSAH------K-WFGLGL---TIVDSLDTMWIMGL------HDEFAEASGWVRDEFRPSL-- 182 (270)
Q Consensus 121 ~~~y~~~a~~~d~l~P~s~~~~------~-~~g~G~---s~~DSl~K~~lm~~------~~~y~~A~~~i~~~l~~~~-- 182 (270)
|.... ..++|.|...+.. + .+++|+ |++++|+|+|++.. +++|++|+++|++||....
T Consensus 268 ~~~~~----~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~a~~~i~~~L~~~~~~ 343 (538)
T 1x9d_A 268 HGLSG----KKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEP 343 (538)
T ss_dssp HTCSC----CBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTEEECTT
T ss_pred Hhccc----CCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCC
Confidence 54321 2457777765432 1 345553 45555689999954 4789999999999986211
Q ss_pred ----CCCC----cccccchhhhhhcCCcccc-ccCCcchhhHHHHHhhcccC----------CCC--------------c
Q psy8438 183 ----ESST----ADVNLFEATIRVLGGLLSA-YHFSADDLFISKALDIGENS----------KGA--------------D 229 (270)
Q Consensus 183 ----f~~~----~~v~~fe~~irflGGlls~-~~ls~~~~~l~~a~~Lg~~~----------~~~--------------~ 229 (270)
|..+ .-.+.++|+.||+|||++. ..+.....+++.|.+|++.| .+| +
T Consensus 344 ~~~~~v~~~~~g~~~~~~~hL~cF~gG~~aLgg~~~~~~~~l~~a~~L~~tC~~~Y~~~~tGl~PE~~~~~~~~~~~~~~ 423 (538)
T 1x9d_A 344 SKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLPASHMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRD 423 (538)
T ss_dssp TCCEEECEEETTEEECEEEGGGGHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEECCSSCCTTCCS
T ss_pred CCceEEEeccCCccCcccchHhhhhhhHHHhcCcccCcHHHHHHHHHHHHHHHHHHHhcccCCCceEEEeccCCCccccc
Confidence 1110 1113579999999999762 22223344566666555422 122 2
Q ss_pred ccccccCccCCCcccchhhhHHHHhhcCChhHHHHHHhhhC
Q psy8438 230 LYVHTNDAHYLLRPEFLESLFVMYQLTGNTTYQEWGWKIFQ 270 (270)
Q Consensus 230 ~~~~~~d~~y~LRPE~iES~f~LyRlTgd~~Yrd~gW~if~ 270 (270)
.++++.+++|+||||+|||+|||||+||||+||||||+|||
T Consensus 424 ~~~~~~d~~y~LRPE~IES~fylyR~TgD~~yre~gw~~f~ 464 (538)
T 1x9d_A 424 VEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQ 464 (538)
T ss_dssp CBCCGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHH
T ss_pred eeeeccCcccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999996
No 2
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=100.00 E-value=1e-66 Score=491.82 Aligned_cols=266 Identities=22% Similarity=0.273 Sum_probs=198.5
Q ss_pred CcccCcCCCCCCC-CchhhHhhHHHHHHHhCCcHHHHHHHHHHHhhcCCCCCCCCcccchhhhHHHhhcccccccccc-c
Q psy8438 1 MLKPLSKSAHKWF-GLGLTIVDSLDTMWIMGLHDEFTEASGWVRDEFRPSLESSTADVNLFEATIRVLGGLLSAYHFS-A 78 (270)
Q Consensus 1 ~l~P~s~~~~~~~-g~~~t~vdsldtl~im~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~fe~~ir~lggllsay~ls-~ 78 (270)
||+|+||+++|+| |||+|||||||||||||+++||++|++||+ +++|+. .+..|||||||||+||||||||+|| +
T Consensus 29 El~PlS~~~~d~~gg~g~TlVDsLDTL~IMgl~~Ef~~a~~~v~-~~~f~~--~~~~vsvFETtIR~LGGLLSAy~Ls~g 105 (475)
T 2ri9_A 29 ELTPVSNGHADSRNGWGASAVDALSTAVIMGKADVVNAILEHVA-DIDFSK--TSDTVSLFETTIRYLAGMLSGYDLLQG 105 (475)
T ss_dssp EEETTTTEEECTTTTSCHHHHHHHHHHHHHTCHHHHHHHHHHHH-HCCTTC--CSSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCccCCCCCcceeehhhccchhhcCCHHHHHHHHHHHH-hCCCCc--CCCccchhheehHhHhHHhHHHHhccC
Confidence 6899999999977 899999999999999999999999999998 577753 2789999999999999999999999 7
Q ss_pred c-----------hHHHHHhhhhcCCC-----CCCCCCcc--------------------------------cccchhHHH
Q psy8438 79 D-----------DLFISKALDIGDIG-----SNSIKPIY--------------------------------FSKQTNARQ 110 (270)
Q Consensus 79 ~-----------~~~l~ka~~~~~~l-----~~~~~p~~--------------------------------~t~~~~~~~ 110 (270)
+ ++||+||+||||+| ||+++|+. +||+++|.+
T Consensus 106 ~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~ 185 (475)
T 2ri9_A 106 PAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYAK 185 (475)
T ss_dssp TTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHHHHHHSCTHHHH
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCCcCCCccchhccccceeeHHHHHHHhCCHHHHH
Confidence 7 79999999999987 67888852 366777666
Q ss_pred HHHHHHHHHhHhhhhccccccccccccccCCC------cccCccc---eecchhhHHHHhCC------hHHHHHHHHHHH
Q psy8438 111 RAVVDAFRHAWSAYKKYAWGQDMLKPLSKSAH------KWFGLGL---TIVDSLDTMWIMGL------HDEFAEASGWVR 175 (270)
Q Consensus 111 ~av~~~f~~~~~~y~~~a~~~d~l~P~s~~~~------~~~g~G~---s~~DSl~K~~lm~~------~~~y~~A~~~i~ 175 (270)
++..+++..|...++.....++|.|...+.. ..+++|+ |++++|+|+|++.. +++|++|+++|+
T Consensus 186 -~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~~~~~m~~~a~~~i~ 264 (475)
T 2ri9_A 186 -LSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKRFETYKDRWVLAAESTI 264 (475)
T ss_dssp -HHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 4566666666533111112457877765432 1335553 34555689999954 368999999999
Q ss_pred HhcCCCC-------CCCC----cccccchhhhhhcCCcccc-ccCCcchhhHHHHHhhcccC----------CCCccc--
Q psy8438 176 DEFRPSL-------ESST----ADVNLFEATIRVLGGLLSA-YHFSADDLFISKALDIGENS----------KGADLY-- 231 (270)
Q Consensus 176 ~~l~~~~-------f~~~----~~v~~fe~~irflGGlls~-~~ls~~~~~l~~a~~Lg~~~----------~~~~~~-- 231 (270)
+||.... |..+ .-...++|+.||+|||++. ..+.+.+.+++.|.+|++.| .+|+.+
T Consensus 265 ~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~ 344 (475)
T 2ri9_A 265 KHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGTVLDRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGW 344 (475)
T ss_dssp HHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEEC
T ss_pred HHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhcccCCCCcEEEe
Confidence 9997211 1000 1113579999999999762 11223445666666665532 233322
Q ss_pred -----------------ccccCccCCCcccchhhhHHHHhhcCChhHHHHHHhhhC
Q psy8438 232 -----------------VHTNDAHYLLRPEFLESLFVMYQLTGNTTYQEWGWKIFQ 270 (270)
Q Consensus 232 -----------------~~~~d~~y~LRPE~iES~f~LyRlTgd~~Yrd~gW~if~ 270 (270)
+.+.+++|+||||+|||+|||||+||||+||||||+|||
T Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ 400 (475)
T 2ri9_A 345 DPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFV 400 (475)
T ss_dssp CTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred ecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 123458999999999999999999999999999999996
No 3
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=100.00 E-value=3e-66 Score=488.51 Aligned_cols=261 Identities=27% Similarity=0.456 Sum_probs=192.5
Q ss_pred CcccCcCCCCC--CC-Cc-hhhHhhHHHHHHHhCCcHHHHHHHHHHHhhcCCCCCCCCcccchhhhHHHhhccccccccc
Q psy8438 1 MLKPLSKSAHK--WF-GL-GLTIVDSLDTMWIMGLHDEFTEASGWVRDEFRPSLESSTADVNLFEATIRVLGGLLSAYHF 76 (270)
Q Consensus 1 ~l~P~s~~~~~--~~-g~-~~t~vdsldtl~im~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~fe~~ir~lggllsay~l 76 (270)
||+|+||++++ +| || |+|||||||||||||+++||++|++||+++++|+ .+..|||||||||+||||||||+|
T Consensus 44 El~P~S~~g~~~~~fg~~~g~TlVDsLDTL~IMgl~~Ef~~A~~~v~~~l~f~---~~~~vsvFETtIR~LGGLLSAy~L 120 (478)
T 1nxc_A 44 ELKPISKEGHSSSLFGNIKGATIVDALDTLFIMGMKTEFQEAKSWIKKYLDFN---VNAEVSVFEVNIRFVGGLLSAYYL 120 (478)
T ss_dssp EEETTTTEEECCGGGTTCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC---CSSEEEHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCcCCCccCCcccchheecccceeecCCHHHHHHHHHHHHhhcCcc---CCCccchhheehhhhhhhhhhhhc
Confidence 68999999863 45 67 9999999999999999999999999999988886 468999999999999999999999
Q ss_pred ccchHHHHHhhhhcCCC-----CCCCCCcc-------------------------------------cccchhHHHHHHH
Q psy8438 77 SADDLFISKALDIGDIG-----SNSIKPIY-------------------------------------FSKQTNARQRAVV 114 (270)
Q Consensus 77 s~~~~~l~ka~~~~~~l-----~~~~~p~~-------------------------------------~t~~~~~~~~av~ 114 (270)
|+|++||+||+||||+| +|+++|+. +||+++|.+. +.
T Consensus 121 sgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~-a~ 199 (478)
T 1nxc_A 121 SGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEK-VM 199 (478)
T ss_dssp HCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHH-HH
T ss_pred cCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHCChHHHHH-HH
Confidence 99999999999999986 67888852 1333333331 22
Q ss_pred HHHHHhHhhhhccccccccccccccCCC--c----ccCccc---eecchhhHHHHhCC------hHHHHHHHHHHHHhcC
Q psy8438 115 DAFRHAWSAYKKYAWGQDMLKPLSKSAH--K----WFGLGL---TIVDSLDTMWIMGL------HDEFAEASGWVRDEFR 179 (270)
Q Consensus 115 ~~f~~~~~~y~~~a~~~d~l~P~s~~~~--~----~~g~G~---s~~DSl~K~~lm~~------~~~y~~A~~~i~~~l~ 179 (270)
.+++..+... ..++|.|...+.. . .+++|+ |++++|+|+|+|.. +++|++|+++|++||.
T Consensus 200 ~~~~~l~~~~-----~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a~~~i~~~l~ 274 (478)
T 1nxc_A 200 KIRTVLNKLD-----KPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLI 274 (478)
T ss_dssp HHHHHHHHSC-----CGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHhcC-----CCCCccccccCCCCCCccCceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhc
Confidence 2222222211 1357777765432 1 234553 34555689999954 4789999999999986
Q ss_pred CCC-----CCC----CcccccchhhhhhcCCccc--cccCC--cchhhHHHHHhhcccC----------CCCcc------
Q psy8438 180 PSL-----ESS----TADVNLFEATIRVLGGLLS--AYHFS--ADDLFISKALDIGENS----------KGADL------ 230 (270)
Q Consensus 180 ~~~-----f~~----~~~v~~fe~~irflGGlls--~~~ls--~~~~~l~~a~~Lg~~~----------~~~~~------ 230 (270)
.+. |.. ..-.+.++|+.||+|||++ +.... ..+.+++.|.+|++.| .+|+.
T Consensus 275 ~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~~tgl~PE~~~~~~~ 354 (478)
T 1nxc_A 275 RKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRTYVKLGPEAFRFDGG 354 (478)
T ss_dssp EECTTSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCCSEEESSTT
T ss_pred ccCCCCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEeccC
Confidence 211 111 0112357999999999976 22221 1245777777776543 23432
Q ss_pred ----cccccCccCCCcccchhhhHHHHhhcCChhHHHHHHhhhC
Q psy8438 231 ----YVHTNDAHYLLRPEFLESLFVMYQLTGNTTYQEWGWKIFQ 270 (270)
Q Consensus 231 ----~~~~~d~~y~LRPE~iES~f~LyRlTgd~~Yrd~gW~if~ 270 (270)
.+++.+++|+||||+|||+|||||+||||+||||||+|||
T Consensus 355 ~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ 398 (478)
T 1nxc_A 355 VEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVE 398 (478)
T ss_dssp CSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred cccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 2356789999999999999999999999999999999996
No 4
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=100.00 E-value=4.9e-66 Score=489.73 Aligned_cols=267 Identities=20% Similarity=0.231 Sum_probs=196.8
Q ss_pred CcccCcCCCCCCC-CchhhHhhHHHHHHHhCCcHHHHHHHHHHHhhcCCCCC-CCCcccchhhhHHHhhccccccccccc
Q psy8438 1 MLKPLSKSAHKWF-GLGLTIVDSLDTMWIMGLHDEFTEASGWVRDEFRPSLE-SSTADVNLFEATIRVLGGLLSAYHFSA 78 (270)
Q Consensus 1 ~l~P~s~~~~~~~-g~~~t~vdsldtl~im~~~~e~~~~~~~~~~~~~~~~~-~~~~~~~~fe~~ir~lggllsay~ls~ 78 (270)
||+|+||+++|+| |||+|||||||||||||+++||++|++||+ +++|+.. ..+..|||||||||+||||||||+||+
T Consensus 39 EL~PlS~~g~d~~gg~g~TlVDsLDTL~IMgl~~Ef~~A~~~v~-~l~f~~~~~~~~~VsvFETtIR~LGGLLSAy~Ls~ 117 (503)
T 1hcu_A 39 DLHPVSNSFDDERNGWGSSAIDGLDTAILMGDADIVNTILQYVP-QINFTTTAVANQGSSVFETNIRYLGGLLSAYDLLR 117 (503)
T ss_dssp EEETTTTEEECTTTTSCHHHHHHHHHHHHTTCHHHHHHHHHHGG-GCCTTCCSSTTCCEEHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCCccCCCCCcceeehhhccchhhcCCHHHHHHHHHHHH-hCCCCcccccCCccchheeehhhHhHHHHHHHHcc
Confidence 6899999999977 899999999999999999999999999998 5777531 026889999999999999999999999
Q ss_pred ch------------HHHHHhhhhcCCC-----CCCCCCcc---------------------------------cccchhH
Q psy8438 79 DD------------LFISKALDIGDIG-----SNSIKPIY---------------------------------FSKQTNA 108 (270)
Q Consensus 79 ~~------------~~l~ka~~~~~~l-----~~~~~p~~---------------------------------~t~~~~~ 108 (270)
|+ +||+||+||||+| ||+++|+. +||+++|
T Consensus 118 ~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y 197 (503)
T 1hcu_A 118 GPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQY 197 (503)
T ss_dssp TTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEEECSSSCEECCCSEEEHHHHTTSHHHHHHHHHHHSCTHH
T ss_pred CccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccCCCCCCCCccccccccceeeehHHHHHHhCChHH
Confidence 94 9999999999987 67888852 3666666
Q ss_pred HHHHHHHHHHHhHhhhhccccccccccccccCCC--c----ccCccc---eecchhhHHHHhCC------hHHHHHHHHH
Q psy8438 109 RQRAVVDAFRHAWSAYKKYAWGQDMLKPLSKSAH--K----WFGLGL---TIVDSLDTMWIMGL------HDEFAEASGW 173 (270)
Q Consensus 109 ~~~av~~~f~~~~~~y~~~a~~~d~l~P~s~~~~--~----~~g~G~---s~~DSl~K~~lm~~------~~~y~~A~~~ 173 (270)
.+ ++..+++..+.... .....++|.|...+.. . .+++|+ |++++|+|+|+|.. +++|++|+++
T Consensus 198 ~~-~a~~~~~~l~~~~~-~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~~~~y~~m~~~a~~~ 275 (503)
T 1hcu_A 198 AQ-LAQKGESYLLNPKG-SPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVAFAHYKDRWVLGADS 275 (503)
T ss_dssp HH-HHHHHHHHHHSCCB-SCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHhhhc-ccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 65 45566666654321 0112457777765432 1 235553 44555689999954 3689999999
Q ss_pred HHHhcCCCC-------CCCC----cccccchhhhhhcCCcccc-ccCCcchhhHHHHHhhcccC----------CCCccc
Q psy8438 174 VRDEFRPSL-------ESST----ADVNLFEATIRVLGGLLSA-YHFSADDLFISKALDIGENS----------KGADLY 231 (270)
Q Consensus 174 i~~~l~~~~-------f~~~----~~v~~fe~~irflGGlls~-~~ls~~~~~l~~a~~Lg~~~----------~~~~~~ 231 (270)
|++||.... |..+ .-...++|+.||+|||++. ..+.+.+.+++.|.+|++.| .+|+.+
T Consensus 276 i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~~~~~a~~L~~tC~~~y~~~~tGl~PE~~ 355 (503)
T 1hcu_A 276 TIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLNEQKYIDFGIKLASSYFGTYTQTASGIGPEGF 355 (503)
T ss_dssp HHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTSSSSCCCSEE
T ss_pred HHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHHHhcCcccccHHHHHHHHHHHHHHHHHHHhCccCCCceEE
Confidence 999997211 1000 1113579999999999762 11223445566666655432 223211
Q ss_pred -------------------------ccccCccCCCcccchhhhHHHHhhcCChhHHHHHHhhhC
Q psy8438 232 -------------------------VHTNDAHYLLRPEFLESLFVMYQLTGNTTYQEWGWKIFQ 270 (270)
Q Consensus 232 -------------------------~~~~d~~y~LRPE~iES~f~LyRlTgd~~Yrd~gW~if~ 270 (270)
+.+.+++|+||||+|||+|||||+||||+||||||+|||
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~if~ 419 (503)
T 1hcu_A 356 AWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALS 419 (503)
T ss_dssp ECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHHHH
T ss_pred EeecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 123458899999999999999999999999999999996
No 5
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=100.00 E-value=3.2e-65 Score=484.44 Aligned_cols=265 Identities=26% Similarity=0.433 Sum_probs=196.5
Q ss_pred CcccCcCCCCCC-C---CchhhHhhHHHHHHHh---------CCcHHHHHHHHHHHhhcCCCCCCCCcccchhhhHHHhh
Q psy8438 1 MLKPLSKSAHKW-F---GLGLTIVDSLDTMWIM---------GLHDEFTEASGWVRDEFRPSLESSTADVNLFEATIRVL 67 (270)
Q Consensus 1 ~l~P~s~~~~~~-~---g~~~t~vdsldtl~im---------~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~fe~~ir~l 67 (270)
||+||||+++|+ | |||+|||||||||||| ||++||++|++||+++++|+. +..|||||||||+|
T Consensus 29 EL~PlS~~g~~~~~~g~g~G~TlVDSLDTL~IM~~~~~~~~~gl~~Ef~~A~~~V~~~l~F~~---d~~VsvFETtIR~L 105 (511)
T 1dl2_A 29 VYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRSEHWINDVLDFDI---DAEVNVFETTIRML 105 (511)
T ss_dssp EEETTTTEEECSSTTCCCCCTTHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHTCCCCC---SSEEEHHHHHHHHH
T ss_pred cccCCCCCcCCCCccCCccceeeeecccceEEeccccccccCCcHHHHHHHHHHHHHhcCCCC---Cceechhheehhhh
Confidence 689999999997 6 7999999999999999 999999999999999888863 57899999999999
Q ss_pred cccccccccc------cchHHHHHhhhhcCCC------CCCCCCcc----------------------------------
Q psy8438 68 GGLLSAYHFS------ADDLFISKALDIGDIG------SNSIKPIY---------------------------------- 101 (270)
Q Consensus 68 ggllsay~ls------~~~~~l~ka~~~~~~l------~~~~~p~~---------------------------------- 101 (270)
|||||||+|| +|++||+||+||||+| ||+++|+.
T Consensus 106 GGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~L 185 (511)
T 1dl2_A 106 GGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYL 185 (511)
T ss_dssp HHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHH
T ss_pred hhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHH
Confidence 9999999999 9999999999999985 68888852
Q ss_pred --cccchhHHHHHHHHHHHHhHhhhhccccccccccccccCCC------cccCccc---eecchhhHHHHhCC----hHH
Q psy8438 102 --FSKQTNARQRAVVDAFRHAWSAYKKYAWGQDMLKPLSKSAH------KWFGLGL---TIVDSLDTMWIMGL----HDE 166 (270)
Q Consensus 102 --~t~~~~~~~~av~~~f~~~~~~y~~~a~~~d~l~P~s~~~~------~~~g~G~---s~~DSl~K~~lm~~----~~~ 166 (270)
+||+++|.+ ++..+++..|...... -..++|.|+..+.. ..+++|+ |++++|+|+|+|.. +++
T Consensus 186 S~LTGd~~Y~~-~a~r~~~~l~~~~~~~-~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m 263 (511)
T 1dl2_A 186 AYLTGNRTYWE-LVERVYEPLYKNNDLL-NTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDL 263 (511)
T ss_dssp HHHHTCHHHHH-HHHTTHHHHHHHHTHH-HHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHCChHHHH-HHHHHHHHHHhccccc-CCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHH
Confidence 255555544 3444455554432100 01357777765432 2335553 44555689999953 478
Q ss_pred HHHHHHHHHHhcCCCC------CCCC-------cccccchhhhhhcCCccc--cc-cCCc---------chhhHHHHHhh
Q psy8438 167 FAEASGWVRDEFRPSL------ESST-------ADVNLFEATIRVLGGLLS--AY-HFSA---------DDLFISKALDI 221 (270)
Q Consensus 167 y~~A~~~i~~~l~~~~------f~~~-------~~v~~fe~~irflGGlls--~~-~ls~---------~~~~l~~a~~L 221 (270)
|++|+++|++||.... |..+ .-.+.++|+.||+|||++ +. .+.. ++.+++.|.+|
T Consensus 264 ~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~~aLg~~~~~~~~~a~~~~~~~~~~~~~a~~l 343 (511)
T 1dl2_A 264 YRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGSTEGLSIHEARRRPFFSKSDWDLAKGI 343 (511)
T ss_dssp HHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHHHHHHHHTTCCHHHHTTSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHHHHhccccCCChhhhhhcccccHHHHHHHHHH
Confidence 9999999999986211 1111 112357999999999976 21 1211 11355566665
Q ss_pred cccC----------CCC---------------------cccccccCccCCCcccchhhhHHHHhhcCChhHHHHHHhhhC
Q psy8438 222 GENS----------KGA---------------------DLYVHTNDAHYLLRPEFLESLFVMYQLTGNTTYQEWGWKIFQ 270 (270)
Q Consensus 222 g~~~----------~~~---------------------~~~~~~~d~~y~LRPE~iES~f~LyRlTgd~~Yrd~gW~if~ 270 (270)
+..| .+| +.++++.+++|+||||+|||+|||||+||||+||||||+|||
T Consensus 344 ~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ 423 (511)
T 1dl2_A 344 TDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIAT 423 (511)
T ss_dssp HHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHH
T ss_pred HHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCcccCcCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4322 122 224567799999999999999999999999999999999996
No 6
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=99.96 E-value=3.6e-30 Score=244.74 Aligned_cols=163 Identities=48% Similarity=0.825 Sum_probs=133.4
Q ss_pred cchhHHHHHHHHHHHHhHhhhhccccccccccccccCCCcccCccceecchhhHHHHhCChHHHHHHHHHHHHhcCCCCC
Q psy8438 104 KQTNARQRAVVDAFRHAWSAYKKYAWGQDMLKPLSKSAHKWFGLGLTIVDSLDTMWIMGLHDEFAEASGWVRDEFRPSLE 183 (270)
Q Consensus 104 ~~~~~~~~av~~~f~~~~~~y~~~a~~~d~l~P~s~~~~~~~g~G~s~~DSl~K~~lm~~~~~y~~A~~~i~~~l~~~~f 183 (270)
.....++++|+++|.|+|++|.+||||+|+|.|+|+.+.+++|.|++++|||+|+||||++++|++|+++|.+++. |
T Consensus 83 ~~~~~rr~~Vk~~F~haW~~Y~~~Awg~DEL~PlS~~g~d~fg~g~TLVDSLDTL~IMgl~~EF~~A~~~V~~~~~---f 159 (538)
T 1x9d_A 83 VHLNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSEWFGLGLTLIDALDTMWILGLRKEFEEARKWVSKKLH---F 159 (538)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHCTTSSEEETTTTEEECSSSSCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC---C
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCcccccCCceeeeeccceeeecCCHHHHHHHHHHHHHhcC---C
Confidence 3445678899999999999999999999999999999888887799999999999999999999999999999888 8
Q ss_pred CCCcccccchhhhhhcCCccccccCCcchhhHHHHHhhcccCCCC--------cccccccCc--cC-CCccc--chh--h
Q psy8438 184 SSTADVNLFEATIRVLGGLLSAYHFSADDLFISKALDIGENSKGA--------DLYVHTNDA--HY-LLRPE--FLE--S 248 (270)
Q Consensus 184 ~~~~~v~~fe~~irflGGlls~~~ls~~~~~l~~a~~Lg~~~~~~--------~~~~~~~d~--~y-~LRPE--~iE--S 248 (270)
+.+..|++||++||++|||||||+|+++++++++|++||+++.++ -..++...+ +. ...++ +.| |
T Consensus 160 ~~d~~VsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GS 239 (538)
T 1x9d_A 160 EKDVDVNLFESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTS 239 (538)
T ss_dssp CSSCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHS
T ss_pred CCCceeehhheehhhhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcCCCceeccccc
Confidence 888899999999999999999999999999999999999975321 111211111 00 00111 222 2
Q ss_pred h----HHHHhhcCChhHHHHHHhhh
Q psy8438 249 L----FVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 249 ~----f~LyRlTgd~~Yrd~gW~if 269 (270)
+ -+|.|+||||+|.+.+-+++
T Consensus 240 l~LEF~~LS~LTGd~~Y~~~a~r~~ 264 (538)
T 1x9d_A 240 IQLEFRELSRLTGDKKFQEAVEKVT 264 (538)
T ss_dssp SHHHHHHHHHHHCCTHHHHHHHHHH
T ss_pred eeeeHHHHHHHhCCcHHHHHHHHHH
Confidence 2 48999999999999987765
No 7
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=99.95 E-value=1.5e-29 Score=238.60 Aligned_cols=160 Identities=35% Similarity=0.649 Sum_probs=128.7
Q ss_pred hHHHHHHHHHHHHhHhhhhccccccccccccccCCC--cc-cCc-cceecchhhHHHHhCChHHHHHHHHHHHHhcCCCC
Q psy8438 107 NARQRAVVDAFRHAWSAYKKYAWGQDMLKPLSKSAH--KW-FGL-GLTIVDSLDTMWIMGLHDEFAEASGWVRDEFRPSL 182 (270)
Q Consensus 107 ~~~~~av~~~f~~~~~~y~~~a~~~d~l~P~s~~~~--~~-~g~-G~s~~DSl~K~~lm~~~~~y~~A~~~i~~~l~~~~ 182 (270)
..++++|+++|.|+|++|.+||||+|+|.|+|+.+. +. .|+ |++++|||+|+||||++++|++|+++|.+++.
T Consensus 18 ~~rr~~Vk~~F~haw~~Y~~~Awg~DEl~P~S~~g~~~~~fg~~~g~TlVDsLDTL~IMgl~~Ef~~A~~~v~~~l~--- 94 (478)
T 1nxc_A 18 REKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIMGMKTEFQEAKSWIKKYLD--- 94 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSEEETTTTEEECCGGGTTCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCcCCCccCCcccchheecccceeecCCHHHHHHHHHHHHhhcC---
Confidence 356778999999999999999999999999998764 33 456 89999999999999999999999999999988
Q ss_pred CCCCcccccchhhhhhcCCccccccCCcchhhHHHHHhhcccCCC----C----cccccccCc--cC-CCcc--c--chh
Q psy8438 183 ESSTADVNLFEATIRVLGGLLSAYHFSADDLFISKALDIGENSKG----A----DLYVHTNDA--HY-LLRP--E--FLE 247 (270)
Q Consensus 183 f~~~~~v~~fe~~irflGGlls~~~ls~~~~~l~~a~~Lg~~~~~----~----~~~~~~~d~--~y-~LRP--E--~iE 247 (270)
|+.+..|++||++||++|||||||+|+++++++++|++||+++.+ | -..++...+ .. ...+ + +.|
T Consensus 95 f~~~~~vsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe 174 (478)
T 1nxc_A 95 FNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAE 174 (478)
T ss_dssp CCCSSEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHH
T ss_pred ccCCCccchhheehhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCccccc
Confidence 887888999999999999999999999999999999999997532 1 111211111 00 0000 1 122
Q ss_pred --hh----HHHHhhcCChhHHHHHHhhh
Q psy8438 248 --SL----FVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 248 --S~----f~LyRlTgd~~Yrd~gW~if 269 (270)
|+ -+|.|+||||+|.+.+.++.
T Consensus 175 ~gsl~LEF~~LS~lTGd~~Y~~~a~~~~ 202 (478)
T 1nxc_A 175 FGTLHLEFMHLSHLSGDPVFAEKVMKIR 202 (478)
T ss_dssp HTTCHHHHHHHHHHHCCTHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHCChHHHHHHHHHH
Confidence 33 48999999999999987764
No 8
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=99.95 E-value=1.3e-29 Score=240.23 Aligned_cols=159 Identities=32% Similarity=0.432 Sum_probs=128.2
Q ss_pred hhHHHHHHHHHHHHhHhhhhccccccccccccccCCCccc-CccceecchhhHHHHhCChHHHHHHHHHHHHhcCCCCCC
Q psy8438 106 TNARQRAVVDAFRHAWSAYKKYAWGQDMLKPLSKSAHKWF-GLGLTIVDSLDTMWIMGLHDEFAEASGWVRDEFRPSLES 184 (270)
Q Consensus 106 ~~~~~~av~~~f~~~~~~y~~~a~~~d~l~P~s~~~~~~~-g~G~s~~DSl~K~~lm~~~~~y~~A~~~i~~~l~~~~f~ 184 (270)
...++++|+++|.|+|++|.+||||+|+|.|+|+.+.+++ |+|++++|||+|+||||++++|++|+++|. ++. |+
T Consensus 12 ~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~d~~gg~g~TlVDsLDTL~IMgl~~Ef~~A~~~v~-~l~---f~ 87 (503)
T 1hcu_A 12 NPTRAAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDERNGWGSSAIDGLDTAILMGDADIVNTILQYVP-QIN---FT 87 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECTTTTSCHHHHHHHHHHHHTTCHHHHHHHHHHGG-GCC---TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccccccCcCCccCCCCCcceeehhhccchhhcCCHHHHHHHHHHHH-hCC---CC
Confidence 3467889999999999999999999999999999887765 799999999999999999999999999998 577 76
Q ss_pred C----CcccccchhhhhhcCCccccccCCcc------------hhhHHHHHhhcccCCCC--------cccccccCccCC
Q psy8438 185 S----TADVNLFEATIRVLGGLLSAYHFSAD------------DLFISKALDIGENSKGA--------DLYVHTNDAHYL 240 (270)
Q Consensus 185 ~----~~~v~~fe~~irflGGlls~~~ls~~------------~~~l~~a~~Lg~~~~~~--------~~~~~~~d~~y~ 240 (270)
. +..|++||++||++|||||||+|+++ .+++++|++||+++.++ -..++.... -.
T Consensus 88 ~~~~~~~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~~-~~ 166 (503)
T 1hcu_A 88 TTAVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTVFFNPT-VR 166 (503)
T ss_dssp CCSSTTCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEEECSSS-CE
T ss_pred cccccCCccchheeehhhHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccC-CC
Confidence 5 67899999999999999999999987 49999999999986421 111111110 00
Q ss_pred Ccc--c--chh--hh----HHHHhhcCChhHHHHHHhhh
Q psy8438 241 LRP--E--FLE--SL----FVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 241 LRP--E--~iE--S~----f~LyRlTgd~~Yrd~gW~if 269 (270)
..+ + +.| |+ -+|.|+||||+|.+.+-+++
T Consensus 167 ~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~ 205 (503)
T 1hcu_A 167 RSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGE 205 (503)
T ss_dssp ECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHH
T ss_pred CCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHH
Confidence 001 1 122 32 48999999999999998765
No 9
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=99.95 E-value=2.2e-29 Score=237.47 Aligned_cols=159 Identities=32% Similarity=0.433 Sum_probs=128.0
Q ss_pred hHHHHHHHHHHHHhHhhhhccccccccccccccCCCccc-CccceecchhhHHHHhCChHHHHHHHHHHHHhcCCCCCCC
Q psy8438 107 NARQRAVVDAFRHAWSAYKKYAWGQDMLKPLSKSAHKWF-GLGLTIVDSLDTMWIMGLHDEFAEASGWVRDEFRPSLESS 185 (270)
Q Consensus 107 ~~~~~av~~~f~~~~~~y~~~a~~~d~l~P~s~~~~~~~-g~G~s~~DSl~K~~lm~~~~~y~~A~~~i~~~l~~~~f~~ 185 (270)
..|+++|+++|.|+|++|.+||||+|+|.|+|+.+.+++ |+|++++|||+|+||||++++|++|+++|. ++. |+.
T Consensus 3 ~~r~~~Vk~~F~haw~~Y~~~Awg~DEl~PlS~~~~d~~gg~g~TlVDsLDTL~IMgl~~Ef~~a~~~v~-~~~---f~~ 78 (475)
T 2ri9_A 3 QAKADAVKEAFQHAWNGYMKYAFPHDELTPVSNGHADSRNGWGASAVDALSTAVIMGKADVVNAILEHVA-DID---FSK 78 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECTTTTSCHHHHHHHHHHHHHTCHHHHHHHHHHHH-HCC---TTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCccCCCCCcceeehhhccchhhcCCHHHHHHHHHHHH-hCC---CCc
Confidence 357788999999999999999999999999999887765 799999999999999999999999999998 577 877
Q ss_pred -CcccccchhhhhhcCCccccccCC-cc-----------hhhHHHHHhhcccCCCC----c--ccccccCccCCCccc--
Q psy8438 186 -TADVNLFEATIRVLGGLLSAYHFS-AD-----------DLFISKALDIGENSKGA----D--LYVHTNDAHYLLRPE-- 244 (270)
Q Consensus 186 -~~~v~~fe~~irflGGlls~~~ls-~~-----------~~~l~~a~~Lg~~~~~~----~--~~~~~~d~~y~LRPE-- 244 (270)
+..|++||++||++|||||||+|+ ++ .+++++|++||+++.++ . ++..++-++-...+.
T Consensus 79 ~~~~vsvFETtIR~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~~~~~~ 158 (475)
T 2ri9_A 79 TSDTVSLFETTIRYLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGNDGATT 158 (475)
T ss_dssp CSSCEEHHHHHHHHHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCBCCCSE
T ss_pred CCCccchhheehHhHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCCcCCCc
Confidence 888999999999999999999998 65 69999999999986431 1 111111111011111
Q ss_pred --chh--hh----HHHHhhcCChhHHHHHHhhh
Q psy8438 245 --FLE--SL----FVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 245 --~iE--S~----f~LyRlTgd~~Yrd~gW~if 269 (270)
+.| |+ -+|.|+||||+|.+.+-+++
T Consensus 159 ~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~ 191 (475)
T 2ri9_A 159 NGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAE 191 (475)
T ss_dssp EEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHH
T ss_pred cchhccccceeeHHHHHHHhCCHHHHHHHHHHH
Confidence 122 22 48999999999999987765
No 10
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=99.95 E-value=2e-29 Score=239.23 Aligned_cols=160 Identities=33% Similarity=0.563 Sum_probs=130.4
Q ss_pred hHHHHHHHHHHHHhHhhhhccccccccccccccCCCcc-c---CccceecchhhHHHHh---------CChHHHHHHHHH
Q psy8438 107 NARQRAVVDAFRHAWSAYKKYAWGQDMLKPLSKSAHKW-F---GLGLTIVDSLDTMWIM---------GLHDEFAEASGW 173 (270)
Q Consensus 107 ~~~~~av~~~f~~~~~~y~~~a~~~d~l~P~s~~~~~~-~---g~G~s~~DSl~K~~lm---------~~~~~y~~A~~~ 173 (270)
..++++|+++|.|+|++|.+||||+|+|.|+|+.+.++ + |+|+++||||+|+||| |++++|++|+++
T Consensus 3 ~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~~~~~~g~g~G~TlVDSLDTL~IM~~~~~~~~~gl~~Ef~~A~~~ 82 (511)
T 1dl2_A 3 GEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMPRGNQPLGWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRSEHW 82 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCSEEETTTTEEECSSTTCCCCCTTHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcCCCCccCCccceeeeecccceEEeccccccccCCcHHHHHHHHHH
Confidence 35777899999999999999999999999999988776 5 7999999999999999 999999999999
Q ss_pred HHHhcCCCCCCCCcccccchhhhhhcCCccccccCC------cchhhHHHHHhhcccCCC-----Cc--c--cccccCc-
Q psy8438 174 VRDEFRPSLESSTADVNLFEATIRVLGGLLSAYHFS------ADDLFISKALDIGENSKG-----AD--L--YVHTNDA- 237 (270)
Q Consensus 174 i~~~l~~~~f~~~~~v~~fe~~irflGGlls~~~ls------~~~~~l~~a~~Lg~~~~~-----~~--~--~~~~~d~- 237 (270)
|.+++. |+.+..|++||++||++|||||||+|+ ++++++++|++||+++.+ |. + .++...+
T Consensus 83 V~~~l~---F~~d~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~ 159 (511)
T 1dl2_A 83 INDVLD---FDIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQ 159 (511)
T ss_dssp HHHTCC---CCCSSEEEHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCC
T ss_pred HHHhcC---CCCCceechhheehhhhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCC
Confidence 999888 888888999999999999999999999 889999999999987532 21 1 1111111
Q ss_pred -cCCCcc--c--chh--hh----HHHHhhcCChhHHHHHHhhh
Q psy8438 238 -HYLLRP--E--FLE--SL----FVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 238 -~y~LRP--E--~iE--S~----f~LyRlTgd~~Yrd~gW~if 269 (270)
...-.+ + +.| |+ -+|.|+||||+|.+.+-+++
T Consensus 160 ~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~ 202 (511)
T 1dl2_A 160 AVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVY 202 (511)
T ss_dssp EECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTH
T ss_pred CCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHH
Confidence 111111 1 122 22 48999999999999997765
No 11
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=92.09 E-value=0.15 Score=46.52 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=26.2
Q ss_pred hHHHhhcccccccccccchHHHHHhhhhcCCC
Q psy8438 62 ATIRVLGGLLSAYHFSADDLFISKALDIGDIG 93 (270)
Q Consensus 62 ~~ir~lggllsay~ls~~~~~l~ka~~~~~~l 93 (270)
|.-=..|+|.-+|+.|+|+.+++.|.+..+++
T Consensus 43 t~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l 74 (377)
T 2ahf_A 43 TDGFWSGILWLCYEYTGDEQYREGAVRTVASF 74 (377)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44556899999999999999999997766543
No 12
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=88.82 E-value=0.48 Score=43.40 Aligned_cols=31 Identities=19% Similarity=0.030 Sum_probs=25.2
Q ss_pred hHHHhhcccccccccccchHHHHHhhhhcCC
Q psy8438 62 ATIRVLGGLLSAYHFSADDLFISKALDIGDI 92 (270)
Q Consensus 62 ~~ir~lggllsay~ls~~~~~l~ka~~~~~~ 92 (270)
|.-=..|+|.-+|+.|+|+.+++.|.+-.++
T Consensus 69 t~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~ 99 (397)
T 2zzr_A 69 TNGFWTGCLWLAYEYNQDKKLKNIAHKNVLS 99 (397)
T ss_dssp CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 4445689999999999999999999765544
No 13
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=87.32 E-value=0.075 Score=48.45 Aligned_cols=67 Identities=15% Similarity=0.079 Sum_probs=42.9
Q ss_pred hhhcCCccccccCCcchhhHHHHHhhcccCCCCcccccccCccCCCcccchhhhHHHHhhcCChhHHHHHHh
Q psy8438 196 IRVLGGLLSAYHFSADDLFISKALDIGENSKGADLYVHTNDAHYLLRPEFLESLFVMYQLTGNTTYQEWGWK 267 (270)
Q Consensus 196 irflGGlls~~~ls~~~~~l~~a~~Lg~~~~~~~~~~~~~d~~y~LRPE~iES~f~LyRlTgd~~Yrd~gW~ 267 (270)
..+++|++.+|..++++.|++.|.+..+.....+.... .+-...+ .-+++.+||+|||++|++++=+
T Consensus 71 G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~~~~~~---n~D~~~~--~~~l~~lY~~Tgd~~Yl~~a~~ 137 (382)
T 3pmm_A 71 GVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAEGATTK---NVNTMAP--FLTLAYRFEETGRMAYLPWLES 137 (382)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC---CTTTTTT--HHHHHHHHHHHCCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHcCCCCcC---cccchHH--HHHHHHHHHHhCCHHHHHHHHH
Confidence 35677888888889999888887765543211111111 1111122 2377899999999999998843
No 14
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=86.43 E-value=0.24 Score=44.74 Aligned_cols=74 Identities=14% Similarity=0.098 Sum_probs=45.3
Q ss_pred hhhhhcCCccccccCCcchhhHHHHHhhcccCCCCcccccccCccCCCcccchhhhHHHHhhcCChhHHHHHHhh
Q psy8438 194 ATIRVLGGLLSAYHFSADDLFISKALDIGENSKGADLYVHTNDAHYLLRPEFLESLFVMYQLTGNTTYQEWGWKI 268 (270)
Q Consensus 194 ~~irflGGlls~~~ls~~~~~l~~a~~Lg~~~~~~~~~~~~~d~~y~LRPE~iES~f~LyRlTgd~~Yrd~gW~i 268 (270)
+...+++|+..++.+++++.|++.|.+.++....++......... +=.-...-+++.||++|||++|++++=++
T Consensus 42 ~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~~~g~l~~~~~~-lDd~~~g~~ll~lY~~Tgd~~yl~~a~~l 115 (373)
T 1nc5_A 42 HQGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNLLFRRDE-LDAIQAGLILFPLYEQTKDERYVKAAKRL 115 (373)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCBCCCTTC-GGGTGGGGGHHHHHHHHCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCcccCCCCC-cchHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 345567788888888899988888777665422211111000000 00001345778899999999999998654
No 15
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=81.69 E-value=2.6 Score=37.87 Aligned_cols=113 Identities=11% Similarity=0.039 Sum_probs=61.4
Q ss_pred ecchhhHHHHhCChHHHHHHH-HHHHHhcCCCCCCCCcccc----cchhhhhhcCCccccccCCcchhhHHHHHhhcccC
Q psy8438 151 IVDSLDTMWIMGLHDEFAEAS-GWVRDEFRPSLESSTADVN----LFEATIRVLGGLLSAYHFSADDLFISKALDIGENS 225 (270)
Q Consensus 151 ~~DSl~K~~lm~~~~~y~~A~-~~i~~~l~~~~f~~~~~v~----~fe~~irflGGlls~~~ls~~~~~l~~a~~Lg~~~ 225 (270)
+..++..+|-....+.|.+++ +++...+.+ +..+. ..+.. ++.-+++..|.+++++.+++.|..+++.+
T Consensus 46 ~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~~-----~g~l~~~~~~lDd~-~~g~~ll~lY~~Tgd~~yl~~a~~la~~l 119 (373)
T 1nc5_A 46 FLCGVLRLWEATGEKRYFEYAKAYADLLIDD-----NGNLLFRRDELDAI-QAGLILFPLYEQTKDERYVKAAKRLRSLY 119 (373)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHBCT-----TCCBCCCTTCGGGT-GGGGGHHHHHHHHCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHhCC-----CCcccCCCCCcchH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 455577777776777776644 444433321 11110 01221 22234566788888999998888888754
Q ss_pred CC----Cc-ccccccCccC--CCcc--cchhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 226 KG----AD-LYVHTNDAHY--LLRP--EFLESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 226 ~~----~~-~~~~~~d~~y--~LRP--E~iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
.. ++ .+.+.....+ ...- =.++-++.++++|||++|+|.|-+.|
T Consensus 120 ~~~~r~~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~ 172 (373)
T 1nc5_A 120 GTLNRTSEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQE 172 (373)
T ss_dssp GTSCBCTTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHH
T ss_pred HhccCCCCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 21 11 2222110000 0000 02334467899999999999998765
No 16
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=67.20 E-value=3.3 Score=37.46 Aligned_cols=111 Identities=14% Similarity=0.014 Sum_probs=55.9
Q ss_pred hhHHHHhCChHHHHHHHHHHHHhcCCCCCCCCcccccchhhhhh--cCCccccccCCcchhhHHHHH----hhcccCCCC
Q psy8438 155 LDTMWIMGLHDEFAEASGWVRDEFRPSLESSTADVNLFEATIRV--LGGLLSAYHFSADDLFISKAL----DIGENSKGA 228 (270)
Q Consensus 155 l~K~~lm~~~~~y~~A~~~i~~~l~~~~f~~~~~v~~fe~~irf--lGGlls~~~ls~~~~~l~~a~----~Lg~~~~~~ 228 (270)
|-.+|-++.++.|.++.+.-.+.+.+. . ...+++-.|-+.| ..++..+|.+++++.+.+.+. .|+.+....
T Consensus 51 lw~~ye~Tgd~~~~~~a~~~~~~l~~~-~--~~~~~~~~HD~Gf~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~ 127 (377)
T 2ahf_A 51 LWLCYEYTGDEQYREGAVRTVASFRER-L--DRFENLDHHNIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWRAD 127 (377)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHH-H--TTTTTCCBSTHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHh-h--hcccCCCCCCchHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 556666667667765543323333200 0 0111122233444 455556777888876655444 444432211
Q ss_pred cccccc-c---Cc--cCCCcc---cchhhhHHHHhhcCChhHHHHHHhh
Q psy8438 229 DLYVHT-N---DA--HYLLRP---EFLESLFVMYQLTGNTTYQEWGWKI 268 (270)
Q Consensus 229 ~~~~~~-~---d~--~y~LRP---E~iES~f~LyRlTgd~~Yrd~gW~i 268 (270)
..++.. + ++ ++.+-= --|+.+|..+++||||+|++.|=+.
T Consensus 128 ~g~i~sw~~~~~~~~~~~~iID~mmni~~L~~A~~~~gd~~y~~~A~~~ 176 (377)
T 2ahf_A 128 AGIIQAWGPKGDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRRVAEAH 176 (377)
T ss_dssp TTEECCBSSTTCTTTTTEEEGGGGGGHHHHHHHHHHHCCTHHHHHHHHH
T ss_pred CCeEEeccCCCCCCCCceEEechHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 122211 1 11 111110 0157888999999999999998653
No 17
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=61.19 E-value=3.4 Score=36.89 Aligned_cols=115 Identities=10% Similarity=0.138 Sum_probs=61.6
Q ss_pred cchhhHHHHhCChHHHHHHHHHHHHhcCCCCCCCCccc-ccchhhhhhc-CCccccccCCcchhhHHHHHhhcccC-C--
Q psy8438 152 VDSLDTMWIMGLHDEFAEASGWVRDEFRPSLESSTADV-NLFEATIRVL-GGLLSAYHFSADDLFISKALDIGENS-K-- 226 (270)
Q Consensus 152 ~DSl~K~~lm~~~~~y~~A~~~i~~~l~~~~f~~~~~v-~~fe~~irfl-GGlls~~~ls~~~~~l~~a~~Lg~~~-~-- 226 (270)
+++|...|.....+.|.+++......+... .....+ +..+- ..|+ =+++.+|.+++++.+++.|+.+.+.. .
T Consensus 52 ~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~--~~~~~~~~~~DD-~a~~~la~~~aye~t~~~~yL~~A~~l~~~l~~~~ 128 (349)
T 3k7x_A 52 VEVRLDAYLRTKKQADLEVAEKTYLHNKNR--NGGTLIHDFYDD-MLWNALAAYRLYKATGKSIYLEDAQLVWQDLVDTG 128 (349)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHH--TTSSSCCSBHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHhc--CCCCCCccCccH-HHHHHHHHHHHHHHHCCchHHHHHHHHHHHHHHhC
Confidence 577777777766777765554333222100 000001 11222 2222 24566788888888998888766543 1
Q ss_pred --C-Cc--ccccccCccCCC---cccchhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 227 --G-AD--LYVHTNDAHYLL---RPEFLESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 227 --~-~~--~~~~~~d~~y~L---RPE~iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
. +. .+..+....|.. --..+..+..|||+|||++|+++|-+++
T Consensus 129 wd~~~gGGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~ 179 (349)
T 3k7x_A 129 WNDIMGGGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTY 179 (349)
T ss_dssp BCSGGGSCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CCCCCCCceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 1 11 111111101110 0124455578999999999999998876
No 18
>1wgn_A UBAP1, ubiquitin associated protein; ubiquitin associated protein 1 (UBAP1), UBA domain, structural genomics; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=60.38 E-value=8.9 Score=25.29 Aligned_cols=32 Identities=13% Similarity=0.100 Sum_probs=24.6
Q ss_pred hhhHhhHHHHHHHhCCcHH------------HHHHHHHHHhhcC
Q psy8438 16 GLTIVDSLDTMWIMGLHDE------------FTEASGWVRDEFR 47 (270)
Q Consensus 16 ~~t~vdsldtl~im~~~~e------------~~~~~~~~~~~~~ 47 (270)
.-.=-++++||.-||..++ .++|+|||-.+.+
T Consensus 16 s~se~e~V~~LvsMGFs~~qA~kALKat~~NvErAaDWLFSH~D 59 (63)
T 1wgn_A 16 SPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHSG 59 (63)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHHCSCHHHHHHHHHHHSC
T ss_pred CcchHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 3345678999999999887 6788888876654
No 19
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=56.96 E-value=4.1 Score=37.07 Aligned_cols=27 Identities=30% Similarity=0.661 Sum_probs=22.7
Q ss_pred ccchhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 243 PEFLESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 243 PE~iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
-|++..+..||++|||++|++|+-+++
T Consensus 319 aea~~all~l~~~tgd~~yl~~a~~~~ 345 (421)
T 2zbl_A 319 VEAMGTAYALYTLTDDSQYEEWYQKWW 345 (421)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 366777789999999999999987664
No 20
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=51.69 E-value=7.7 Score=34.97 Aligned_cols=25 Identities=24% Similarity=0.303 Sum_probs=21.3
Q ss_pred chhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 245 FLESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 245 ~iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
.+.++..+|++|||++|++.+.+.+
T Consensus 73 ~~~gl~~~ye~Tgd~~y~~~a~~~~ 97 (382)
T 3pmm_A 73 GLYGIYQYYQQTGDIEMRDIIDRWF 97 (382)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 4567889999999999999998754
No 21
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=51.53 E-value=5.7 Score=35.86 Aligned_cols=32 Identities=9% Similarity=-0.042 Sum_probs=25.9
Q ss_pred hHHHhhcccccccccccchHHHHHhhhhcCCC
Q psy8438 62 ATIRVLGGLLSAYHFSADDLFISKALDIGDIG 93 (270)
Q Consensus 62 ~~ir~lggllsay~ls~~~~~l~ka~~~~~~l 93 (270)
.+-|.|-++-.||.+++++.+++.|.+..+.+
T Consensus 53 ~n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl 84 (402)
T 3gt5_A 53 SSTRFVFNYAMAYLQFGTAEYLDAVHHGLSYV 84 (402)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHH
Confidence 35688888888898899999999888777653
No 22
>2cos_A Serine/threonine protein kinase LATS2; UBA domain, structure genomics, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.5.2.1
Probab=47.13 E-value=14 Score=23.58 Aligned_cols=22 Identities=18% Similarity=0.305 Sum_probs=18.5
Q ss_pred HHHHHHhCCcHHH-------------HHHHHHHHh
Q psy8438 23 LDTMWIMGLHDEF-------------TEASGWVRD 44 (270)
Q Consensus 23 ldtl~im~~~~e~-------------~~~~~~~~~ 44 (270)
|++|.=||..+|. +.|.+||.+
T Consensus 13 lq~L~eMGFd~erae~Alk~Tg~~Gle~AmewL~k 47 (54)
T 2cos_A 13 LQELVNAGCDQEMAGRALKQTGSRSIEAALEYISK 47 (54)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 7899999999985 677888876
No 23
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=45.34 E-value=8.7 Score=34.16 Aligned_cols=25 Identities=16% Similarity=0.336 Sum_probs=21.7
Q ss_pred chhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 245 FLESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 245 ~iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
.++.+-.|||.|||++|.+.|-++.
T Consensus 218 ~l~g~~~LY~~T~d~~yl~~a~~l~ 242 (349)
T 3k7x_A 218 YIGANLELYRITKEAIYLDTANKTA 242 (349)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 6677889999999999999987764
No 24
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=44.54 E-value=8.5 Score=34.43 Aligned_cols=25 Identities=12% Similarity=0.300 Sum_probs=21.1
Q ss_pred cchhhhHHHHhhcCChhHHHHHHhh
Q psy8438 244 EFLESLFVMYQLTGNTTYQEWGWKI 268 (270)
Q Consensus 244 E~iES~f~LyRlTgd~~Yrd~gW~i 268 (270)
|++-.+..||++|||++|.+|+=++
T Consensus 318 ea~~a~l~ly~~tgd~~yl~~a~~~ 342 (402)
T 1fp3_A 318 EAMIAFLMGYSESGDPALLRLFYQV 342 (402)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 5677778999999999999987554
No 25
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=44.47 E-value=8.6 Score=34.10 Aligned_cols=25 Identities=36% Similarity=0.495 Sum_probs=19.2
Q ss_pred cchhhhHHHHhhcCChhHHHHHHhh
Q psy8438 244 EFLESLFVMYQLTGNTTYQEWGWKI 268 (270)
Q Consensus 244 E~iES~f~LyRlTgd~~Yrd~gW~i 268 (270)
|.+=.+..+|++|||++|.+|+=++
T Consensus 308 e~i~a~~~ly~~tgd~~yl~~a~~~ 332 (388)
T 2gz6_A 308 ESLVALAMGYRLTGRDACWAWYQKM 332 (388)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4444556899999999999987554
No 26
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=41.86 E-value=11 Score=34.35 Aligned_cols=22 Identities=14% Similarity=0.306 Sum_probs=19.4
Q ss_pred hhhHHHHhhcCChhHHHHHHhh
Q psy8438 247 ESLFVMYQLTGNTTYQEWGWKI 268 (270)
Q Consensus 247 ES~f~LyRlTgd~~Yrd~gW~i 268 (270)
.+++++|..|||++|++.|.+-
T Consensus 75 G~lw~~ye~Tgd~~~~~~a~~~ 96 (397)
T 2zzr_A 75 GCLWLAYEYNQDKKLKNIAHKN 96 (397)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHH
Confidence 4789999999999999998764
No 27
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=32.72 E-value=16 Score=34.02 Aligned_cols=22 Identities=27% Similarity=0.371 Sum_probs=18.2
Q ss_pred hhHHHHhhcCChhHHHHHHhhh
Q psy8438 248 SLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 248 S~f~LyRlTgd~~Yrd~gW~if 269 (270)
.+--|.++||||+|++.|-++.
T Consensus 66 ~L~~LS~lTgd~~Y~q~A~~~~ 87 (543)
T 2v8i_A 66 VMSGLSQLSGDPRYQKRAEDIV 87 (543)
T ss_dssp HHHHHHHHHCCTHHHHHHHHHH
T ss_pred HHHHHhhccCCHHHHHHHHHHH
Confidence 3456999999999999997763
No 28
>1q02_A Sequestosome 1; helical bundle, protein binding; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 2jy7_A 2jy8_A 2k0b_X 2knv_A 2rru_A 3b0f_A
Probab=31.60 E-value=16 Score=23.20 Aligned_cols=17 Identities=41% Similarity=0.645 Sum_probs=15.2
Q ss_pred HhhHHHHHHHhCCcHHH
Q psy8438 19 IVDSLDTMWIMGLHDEF 35 (270)
Q Consensus 19 ~vdsldtl~im~~~~e~ 35 (270)
|++||..|.-||+++|=
T Consensus 10 l~~al~qMl~MGF~neg 26 (52)
T 1q02_A 10 LIESLSQMLSMGFSDEG 26 (52)
T ss_dssp HHHHHHHHHTTTCCCTT
T ss_pred HHHHHHHHHHcCCCccc
Confidence 88999999999999764
No 29
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=30.41 E-value=21 Score=32.07 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=21.7
Q ss_pred chhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 245 FLESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 245 ~iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
++|.+.-||++|||++|++.|-+++
T Consensus 178 l~eall~L~~~tgd~~~~~~a~~l~ 202 (402)
T 3gt5_A 178 MCEAMLAAYEASGEQRYLERALVLA 202 (402)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 5778888999999999999997664
No 30
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=28.42 E-value=40 Score=24.75 Aligned_cols=29 Identities=24% Similarity=0.251 Sum_probs=22.8
Q ss_pred chhhHhhHHHHHHHhC---------CcHHHHHHHHHHH
Q psy8438 15 LGLTIVDSLDTMWIMG---------LHDEFTEASGWVR 43 (270)
Q Consensus 15 ~~~t~vdsldtl~im~---------~~~e~~~~~~~~~ 43 (270)
+|.+|.|+||.|.--| .-.+|+++..-+-
T Consensus 10 iG~aL~dtLdEli~~~~Isp~la~kVL~~FDksi~~aL 47 (108)
T 1nvp_D 10 LGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAAL 47 (108)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999998755 4567888876643
No 31
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=27.75 E-value=15 Score=26.02 Aligned_cols=16 Identities=38% Similarity=0.540 Sum_probs=14.1
Q ss_pred hCCcHHHHHHHHHHHh
Q psy8438 29 MGLHDEFTEASGWVRD 44 (270)
Q Consensus 29 m~~~~e~~~~~~~~~~ 44 (270)
|.|.++|++|++.|++
T Consensus 2 m~L~~~F~~A~~~vk~ 17 (89)
T 3epy_A 2 MALQADFDRAAEDVRK 17 (89)
T ss_dssp CHHHHHHHHHHHHGGG
T ss_pred CcHHHHHHHHHHHHHH
Confidence 7789999999999974
No 32
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.28 E-value=29 Score=32.00 Aligned_cols=23 Identities=17% Similarity=0.325 Sum_probs=18.9
Q ss_pred chhhhHHHHhhcCChhHHHHHHh
Q psy8438 245 FLESLFVMYQLTGNTTYQEWGWK 267 (270)
Q Consensus 245 ~iES~f~LyRlTgd~~Yrd~gW~ 267 (270)
++-++..+|+.|||++|.+++=+
T Consensus 87 ~l~gl~~ay~~Tgd~kY~~ya~~ 109 (445)
T 3k11_A 87 TYSALIAAAETTGDKRYTDYVQN 109 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHH
Confidence 34566789999999999998754
No 33
>1nh2_D Transcription initiation factor IIA small chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 b.56.1.1 PDB: 1ytf_D* 1rm1_B
Probab=26.00 E-value=46 Score=24.94 Aligned_cols=29 Identities=28% Similarity=0.435 Sum_probs=22.8
Q ss_pred chhhHhhHHHHHHHhC---------CcHHHHHHHHHHH
Q psy8438 15 LGLTIVDSLDTMWIMG---------LHDEFTEASGWVR 43 (270)
Q Consensus 15 ~~~t~vdsldtl~im~---------~~~e~~~~~~~~~ 43 (270)
+|.+|.|+||.|.--| .-.+|+++..-+-
T Consensus 14 iG~aL~dtLdEli~~~~Isp~la~kVL~~FDksi~~aL 51 (121)
T 1nh2_D 14 IGNSLVDALDTLISDGRIEASLAMRVLETFDKVVAETL 51 (121)
T ss_dssp HHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999999998755 4567888776643
No 34
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=24.95 E-value=29 Score=30.51 Aligned_cols=69 Identities=7% Similarity=0.025 Sum_probs=37.9
Q ss_pred CccccccCCcchhhHHHHHhhcccCC-----CCcc----cccccCc------cCCCcc-cchhh---hHHHHhhcCChhH
Q psy8438 201 GLLSAYHFSADDLFISKALDIGENSK-----GADL----YVHTNDA------HYLLRP-EFLES---LFVMYQLTGNTTY 261 (270)
Q Consensus 201 Glls~~~ls~~~~~l~~a~~Lg~~~~-----~~~~----~~~~~d~------~y~LRP-E~iES---~f~LyRlTgd~~Y 261 (270)
+++..+.++++..+++.|.++.+... .+.. ++..... ....-| ..+|. ++-++++|||++|
T Consensus 180 all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~ 259 (388)
T 2gz6_A 180 LTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKT 259 (388)
T ss_dssp HHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHH
Confidence 34556667777788888877765321 0111 1111000 001111 13454 4567778999999
Q ss_pred HHHHHhhh
Q psy8438 262 QEWGWKIF 269 (270)
Q Consensus 262 rd~gW~if 269 (270)
++.|-+++
T Consensus 260 ~~~A~~~~ 267 (388)
T 2gz6_A 260 INQAVDVV 267 (388)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998775
No 35
>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinus} PDB: 3e80_A* 2fut_A* 2fuq_A*
Probab=22.85 E-value=42 Score=33.08 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=20.9
Q ss_pred hhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 246 LESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 246 iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
+..+-+.|++|||++|.+.+++..
T Consensus 85 l~~LalAylLtgD~ryad~a~~~L 108 (749)
T 3e7j_A 85 VELMALNYLMTKDPKVGREAITSI 108 (749)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCHHHHHHHHHHH
Confidence 567789999999999999999753
No 36
>3a0o_A Oligo alginate lyase; alpha/alpha ballel+anti-parallel beta sheet; 2.11A {Agrobacterium tumefaciens} PDB: 3afl_A*
Probab=22.51 E-value=42 Score=32.84 Aligned_cols=26 Identities=12% Similarity=0.088 Sum_probs=21.5
Q ss_pred cchhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 244 EFLESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 244 E~iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
..+..+-++|++|||++|.+.+++++
T Consensus 210 ~~l~~la~ay~ltgd~kya~~a~~~L 235 (776)
T 3a0o_A 210 YAIRHLAIAGRVLGRDDLLDASRKWL 235 (776)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34556678999999999999998864
No 37
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.10 E-value=69 Score=19.23 Aligned_cols=23 Identities=17% Similarity=0.198 Sum_probs=16.3
Q ss_pred hhHHHHHHHhCCcHHHHHHHHHHHh
Q psy8438 20 VDSLDTMWIMGLHDEFTEASGWVRD 44 (270)
Q Consensus 20 vdsldtl~im~~~~e~~~~~~~~~~ 44 (270)
-+.+..|.-||..+ ++|+..++.
T Consensus 10 ~~~v~~L~~MGF~~--~~a~~AL~~ 32 (47)
T 2ekk_A 10 QQQLQQLMDMGFTR--EHAMEALLN 32 (47)
T ss_dssp HHHHHHHHHHHCCH--HHHHHHHHH
T ss_pred HHHHHHHHHcCCCH--HHHHHHHHH
Confidence 45788899999887 555555543
No 38
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=20.81 E-value=42 Score=30.16 Aligned_cols=25 Identities=16% Similarity=0.464 Sum_probs=21.5
Q ss_pred chhhhHHHHhhcCChhHHHHHHhhh
Q psy8438 245 FLESLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 245 ~iES~f~LyRlTgd~~Yrd~gW~if 269 (270)
.+|.+.-++++|+|++|++.|-+++
T Consensus 177 ~~~al~~l~~~tgd~~~~~~A~~~~ 201 (421)
T 2zbl_A 177 AVEAFLIVYDVTHDKKWLDRALRIA 201 (421)
T ss_dssp HHHHHHHHHHTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 3778888999999999999887765
No 39
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=20.05 E-value=41 Score=30.29 Aligned_cols=22 Identities=14% Similarity=0.360 Sum_probs=18.3
Q ss_pred hhHHHHhhcCChhHHHHHHhhh
Q psy8438 248 SLFVMYQLTGNTTYQEWGWKIF 269 (270)
Q Consensus 248 S~f~LyRlTgd~~Yrd~gW~if 269 (270)
.+.++|++|+|++|++++-+++
T Consensus 83 ~l~~l~~~t~d~~yl~~a~~~l 104 (411)
T 3e6u_A 83 LYLHLYDVFGDPAYLQLAHGYV 104 (411)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHH
Confidence 3467899999999999997764
Done!