Query psy8439
Match_columns 671
No_of_seqs 376 out of 1189
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 18:51:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lwt_X Phosphoinositide phosph 100.0 7E-120 2E-124 1010.2 28.3 383 14-402 103-505 (505)
2 3lwt_X Phosphoinositide phosph 99.9 3.9E-27 1.3E-31 263.1 -2.2 115 469-587 387-505 (505)
3 1w32_A Endo-1,4-beta-xylanase 21.3 2.3E+02 0.0078 29.6 8.2 80 160-247 77-185 (348)
4 1ta3_B Endo-1,4-beta-xylanase; 20.1 71 0.0024 32.8 3.9 81 159-245 78-174 (303)
5 3emz_A Xylanase, endo-1,4-beta 18.1 1.8E+02 0.0061 30.3 6.5 88 158-247 75-181 (331)
6 1ur1_A Endoxylanase; hydrolase 14.1 2.9E+02 0.01 29.1 7.0 85 159-245 100-201 (378)
7 1v0l_A Endo-1,4-beta-xylanase 14.1 1.4E+02 0.0049 30.7 4.5 79 160-246 78-174 (313)
8 1n82_A Xylanase, intra-cellula 12.9 3.5E+02 0.012 27.8 7.1 49 160-208 78-128 (331)
9 3cui_A EXO-beta-1,4-glucanase; 12.6 1.4E+02 0.0049 30.4 3.9 48 160-212 77-125 (315)
10 1xyz_A 1,4-beta-D-xylan-xylano 12.3 1.7E+02 0.006 30.4 4.5 81 160-246 103-201 (347)
No 1
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-120 Score=1010.18 Aligned_cols=383 Identities=43% Similarity=0.755 Sum_probs=312.1
Q ss_pred hhhcchhHHHHHHHHhhcCCCCeEEecCCCcccchhhhcccCCCCCCCcccccCCCceeechhhhhhhcc-----CCCCC
Q psy8439 14 PQQVTMNQQYVSMITKVLSTPYFYYSYTYDLTYNMQRLYNVQPDFLQTPLHERADERFVWNKNILNQFNS-----SDIGG 88 (671)
Q Consensus 14 ~~~~~~e~~~l~~l~~~l~~~~fYfS~~yDLT~slQ~~~~~~~~~~~~~l~~~~d~rF~WN~~l~~~~~~-----~~~~~ 88 (671)
..+.++|++|+++|++++++++|||||+||||+++|++....+ .+.|+++|+||+||++|+++|.. ++.+.
T Consensus 103 ~~~~~~E~~yl~ll~~~l~s~~FYfS~~yDLT~slQ~~~~~~~----~~~~~~~d~~F~WN~~l~~~l~~~~~~~~~~~~ 178 (505)
T 3lwt_X 103 SRIDSEEAEYIKLLELHLKNSTFYFSYTYDLTNSLQRNEKVGP----AASWKTADERFFWNHYLTEDLRNFAHQDPRIDS 178 (505)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCCCEECSSSCTTSCHHHHHHHCS----CCCGGGSCTTTCTTTGGGHHHHHHHTTCGGGGG
T ss_pred cccChhHHHHHHHHHHHhcCCCEEEeCCcCCCcchhhccccCc----cccccCCCCceechHHHHHHHHHhcccCcchhh
Confidence 3456799999999999999999999999999999999876433 26789999999999999999932 34578
Q ss_pred ceeeeeeeeEEeeEEEeCCeeEEEEEEEEeeccCCCcccccccCCCCCCccceeeeeEEEEeCC------eeEEEEEeec
Q psy8439 89 FCVPVIHGFVSINKCTLNGKSFLWTLVSRRSCKRAGTRLFTRGVDAEGNVANFVETEQIIEFEG------YQSSFVQIRG 162 (671)
Q Consensus 89 ~~lpvI~Gfv~~~~~~i~~~~~~~~LISRRS~~raGTRy~~RGiD~~G~vANfVETEqIv~~~~------~~~SfVQiRG 162 (671)
|++|+|||||++..+.++++.+.++||||||++||||||++||||++|||||||||||||+.++ .++||||+||
T Consensus 179 ~~~piI~Gfv~~~~~~~~~~~~~~tLISRRS~~raGtRy~~RGidd~G~VANfVETEqIv~~~~~~~~~~~~~SfvQiRG 258 (505)
T 3lwt_X 179 FIQPVIYGYAKTVDAVLNATPIVLGLITRRSIFRAGTRYFRRGVDKDGNVGNFNETEQILLAENPESEKIHVFSFLQTRG 258 (505)
T ss_dssp GCCCCBSSEEEEEEEEETTEEEEEEEEEEECCCCCSSSCCSSSBCTTSCCSCEEEEEEEEEEECTTTCCEEEEEEEEEEE
T ss_pred hhhHhhcCceEEEEEEECCceEEEEEEEEEecccCCccccccCcCCCCCccceeeEEEEEEeCCCCCCCccEEEEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999999887 8999999999
Q ss_pred ccceeeeeCCCCCcCCCCcccCCCchHHHHHHHHHHhhhhcCCceEEeccccCCChhhHHHHHHHHHHHhCCCCcceeeh
Q psy8439 163 SIPLYWQQYPNLKLKPPPKIIQENNNMEAVSKHFKSQEPYYGYQVILNLIDQHGDEGDIEKAYRTSIRILNSQRVQYEAF 242 (671)
Q Consensus 163 SVPlfW~Q~~~l~~kP~~~i~~~~~~~~a~~kHF~~L~~~YG~~~~VNLl~~kg~E~~L~~ay~~~v~~l~~~~i~y~~f 242 (671)
||||||+|.++++|||++.+. +++.+||++||++|.++||++++||||++||+|.+|+++|+++|+.+++++|+|++|
T Consensus 259 SVPlfW~Q~~~l~~kP~i~i~--~~~~~a~~kHF~~L~~~YG~~~iVNLl~~k~~E~~L~~~y~~~v~~l~~~~i~y~~f 336 (505)
T 3lwt_X 259 SVPIYWAEINNLKYKPNLVLG--ENSLDATKKHFDQQKELYGDNYLVNLVNQKGHELPVKEGYESVVHALNDPKIHYVYF 336 (505)
T ss_dssp CCCSBSCCCCCSSSCCCCCCC--HHHHHHHHHHHHHHHHHHSEEEEEEECCCSSCCCHHHHHHHHHHHHHCCTTEEEEEE
T ss_pred ccCceeeecCCcCcCCCeeec--CchHHHHHHHHHHHHHHhCCcEEEecccCCCchhHHHHHHHHHHHHhcccCCceEEe
Confidence 999999999999999999986 348999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcchhhHHHHHHHHHhh-cccceeEEE--cCC---CceeeeeccEeeeecccccchhhHHHHHHHHHHHHHHH
Q psy8439 243 DFHKECRKMRWDRLQILIDRVAQT-QDAFQTFLL--LQK---NKLISAQEGVFRTNCIDCLDRTNVVQSMLAKRSLCIIL 316 (671)
Q Consensus 243 Dfh~~ck~~~~~~l~~L~~~l~~~-~~~~g~f~~--~~~---g~v~~~Q~GV~RtNClDCLDRTNvvQs~ia~~~L~~qL 316 (671)
|||++||+|+|++++.|++++++. +.++|||+. +.+ ++++..|+||+||||+||||||||||++||+++|+.||
T Consensus 337 Dfh~~~k~~~~~~v~~ll~~l~~~~~~~~g~f~~~~~~~g~~~~~~~~Q~GV~RtNCiDCLDRTNvvQ~~i~~~~L~~qL 416 (505)
T 3lwt_X 337 DFHHECRKMQWHRVKLLIDHLEKLGLSNEDFFHKVIDSNGNTVEIVNEQHSVVRTNCMDCLDRTNVVQSVLAQWVLQKEF 416 (505)
T ss_dssp CCCSSTTTHHHHHHHHHHHHHHHHTCCTTCSEEEEECTTSCEEEEEECCCEEEEEETTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhhhccchhHHHHHHHHHHHhcccccCceEeeccCCCCccceeeccceEEEEecccccccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999885 789999985 344 36899999999999999999999999999999999999
Q ss_pred HHcCCCCCCC---CChHHHHHHHHHHHHhhHHHHHhhcCCCCCCCcceeccccchhhchHhHHHHHHHHhhccCCCchhh
Q psy8439 317 KKLGISEVGE---IDNAFEYLFKQVWADNADIISIQYSGTGALKTDFTRTGKRTKVGMLNDLYNTLARYYKNNFQDGFRQ 393 (671)
Q Consensus 317 ~~lgi~~~~~---~~~~~~~~f~~lWadnGD~iS~qYaGT~Alktd~tRtGkrt~~G~l~D~~~S~~Ryy~NnF~Dg~rQ 393 (671)
+.+|++..++ .+++|+..|++|||||||+||+|||||+|+||||||+|||++.|+++|+.+|++|||+|||.|+.||
T Consensus 417 ~~lgi~~~~~~~~~~~~~~~~f~~lWadnGD~iS~qYaGT~Alkt~~tR~gk~~~~g~l~D~~~S~~Ryy~NnF~D~~rQ 496 (505)
T 3lwt_X 417 ESADVVATGSTWEDNAPLLTSYQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNSASRYYQNNWTDGPRQ 496 (505)
T ss_dssp HHTTSSCTTCCGGGCHHHHHHHHHHHHHHHHHHTTTCCCCC---------------------------------------
T ss_pred HHcCCCCCccccccCHHHHHHHHHHHHHhhHHHHHHhcCCccccCceeeceeechhhhHHHHHHhHhheeecccCcHHHH
Confidence 9999987655 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhhccC
Q psy8439 394 DAIDLFLGN 402 (671)
Q Consensus 394 d~idl~lG~ 402 (671)
||||||||+
T Consensus 497 ~aidl~LGn 505 (505)
T 3lwt_X 497 DSYDLFLGG 505 (505)
T ss_dssp ---------
T ss_pred HHHHHHcCC
Confidence 999999996
No 2
>3lwt_X Phosphoinositide phosphatase SAC1; SAC3/FIG4, lipid metabol endoplasmic reticulum, hydrolase, membrane, transmembrane; 1.96A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.9e-27 Score=263.13 Aligned_cols=115 Identities=43% Similarity=0.717 Sum_probs=44.5
Q ss_pred HhhhhcCCccccCCcCchhhHHHhccchhhcccCcccc----cchhcccccchhhhhhHHhhhhhhHHHhhcCCCCcccc
Q psy8439 469 TVTLRDGPLFVDKPRLYNKWYIVLCPFKMERFFSPEKI----SLWRVAHLESSIYQPKVWADNADIISIQYSGTGALKTD 544 (671)
Q Consensus 469 ~~I~~ng~~fv~~P~L~~~~~~~i~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~wadngd~iS~~Y~Gt~alk~~ 544 (671)
+.+|.||.||+||++++|..+ ++.+|+.++...++ +.++. +.+....+++|||||||+||+|||||+|||||
T Consensus 387 GV~RtNCiDCLDRTNvvQ~~i---~~~~L~~qL~~lgi~~~~~~~~~-~~~~~~~f~~lWadnGD~iS~qYaGT~Alkt~ 462 (505)
T 3lwt_X 387 SVVRTNCMDCLDRTNVVQSVL---AQWVLQKEFESADVVATGSTWED-NAPLLTSYQNLWADNADAVSVAYSGTGALKTD 462 (505)
T ss_dssp EEEEEETTSCHHHHHHHHHHH---HHHHHHHHHHHTTSSCTTCCGGG-CHHHHHHHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEecccccccchHHHHHH---HHHHHHHHHHHcCCCCCcccccc-CHHHHHHHHHHHHHhhHHHHHHhcCCccccCc
Confidence 357899999999999999742 22222222221111 11211 22233468999999999999999999999999
Q ss_pred ceeccccccccchhHHHHHHHHHHhhhcCCccchhhhhhhcCC
Q psy8439 545 FTRTGKRTKAGMLNDLYNTLARYYKNNFQDGFRQDAIDLFLGN 587 (671)
Q Consensus 545 ~tr~gk~~~~g~~~d~~~s~~R~~~nnf~D~~kQd~idl~lg~ 587 (671)
|||+|||++.|+++|+.+|++|||+|||.|+.||||||||||+
T Consensus 463 ~tR~gk~~~~g~l~D~~~S~~Ryy~NnF~D~~rQ~aidl~LGn 505 (505)
T 3lwt_X 463 FTRTGKRTRLGAFNDFLNSASRYYQNNWTDGPRQDSYDLFLGG 505 (505)
T ss_dssp -------------------------------------------
T ss_pred eeeceeechhhhHHHHHHhHhheeecccCcHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999996
No 3
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=21.26 E-value=2.3e+02 Score=29.58 Aligned_cols=80 Identities=18% Similarity=0.291 Sum_probs=46.9
Q ss_pred eecccceeee--eCCCCCcCCCCcccCCCchHHHHHHHHHHhhhhcCC-ce---EEe-ccccC-----C-----------
Q psy8439 160 IRGSIPLYWQ--QYPNLKLKPPPKIIQENNNMEAVSKHFKSQEPYYGY-QV---ILN-LIDQH-----G----------- 216 (671)
Q Consensus 160 iRGSVPlfW~--Q~~~l~~kP~~~i~~~~~~~~a~~kHF~~L~~~YG~-~~---~VN-Ll~~k-----g----------- 216 (671)
+||-.|+.=+ |.|..-..+ ..+..+++++|++.+.++|+. +. ++| .++.. |
T Consensus 77 v~ghtl~W~~~~q~P~W~~~~------~~~~~~~~~~~i~~v~~rY~g~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~ 150 (348)
T 1w32_A 77 VHGHALVWHPSYQLPNWASDS------NANFRQDFARHIDTVAAHFAGQVKSWDVVNEALFDSADDPDGRGSANGYRQSV 150 (348)
T ss_dssp EEEEEEECCCGGGCCTTCSTT------CTTHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCCGGGCTTCCCEETTEECCH
T ss_pred EEEEeeecCccccCchhhhcC------CHHHHHHHHHHHHHHHHHhCCceeEEEeecccccCCccccCCcccccccccch
Confidence 7898877334 555532211 123578899999999999965 44 455 22222 2
Q ss_pred ------ChhhHHHHHHHHHHHhCCCCcceeehhHHHH
Q psy8439 217 ------DEGDIEKAYRTSIRILNSQRVQYEAFDFHKE 247 (671)
Q Consensus 217 ------~E~~L~~ay~~~v~~l~~~~i~y~~fDfh~~ 247 (671)
.+.-+..+|+.+=+. +|+.+...=||+-+
T Consensus 151 ~~~~lgG~~~i~~aF~~Ar~a--dP~a~L~~NDyn~~ 185 (348)
T 1w32_A 151 FYRQFGGPEYIDEAFRRARAA--DPTAELYYNDFNTE 185 (348)
T ss_dssp HHHHHTSTHHHHHHHHHHHHH--CTTSEEEEEESSTT
T ss_pred HHHhcCchHHHHHHHHHHHHh--CCCCEEEecccccc
Confidence 344566777766543 45555544466543
No 4
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3
Probab=20.11 E-value=71 Score=32.78 Aligned_cols=81 Identities=15% Similarity=0.238 Sum_probs=44.2
Q ss_pred EeecccceeeeeCCCCCcCCCCcccCCCchHHHHHHHHHHhhhhcC-CceEEeccc----cCC-----------ChhhHH
Q psy8439 159 QIRGSIPLYWQQYPNLKLKPPPKIIQENNNMEAVSKHFKSQEPYYG-YQVILNLID----QHG-----------DEGDIE 222 (671)
Q Consensus 159 QiRGSVPlfW~Q~~~l~~kP~~~i~~~~~~~~a~~kHF~~L~~~YG-~~~~VNLl~----~kg-----------~E~~L~ 222 (671)
.+||-.++.=+|.|..-..+ ...+.-.+++++|++.+.++|+ .+.....+| ..| .+.-+.
T Consensus 78 ~v~ghtlvW~~q~P~W~~~~----~~~~~~~~~~~~~i~~v~~rY~g~v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~ 153 (303)
T 1ta3_B 78 KVRGHTLVWHSQLPSWVSSI----GDANTLRSVMTNHINEVVGRYKGKIMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVR 153 (303)
T ss_dssp EEEEEEEECSSSCCHHHHTC----CCHHHHHHHHHHHHHHHHHHTTTSCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHH
T ss_pred EEEEeeccccCCCChhhhcC----CCHHHHHHHHHHHHHHHHHhcCCcceEEEeecCcccCCCCcccchHHHhccHHHHH
Confidence 47898887334554321111 0112235889999999999996 454433333 211 133455
Q ss_pred HHHHHHHHHhCCCCcceeehhHH
Q psy8439 223 KAYRTSIRILNSQRVQYEAFDFH 245 (671)
Q Consensus 223 ~ay~~~v~~l~~~~i~y~~fDfh 245 (671)
.+|+.+=+. +|+.+...=||+
T Consensus 154 ~af~~Ar~~--dP~a~L~~Ndyn 174 (303)
T 1ta3_B 154 IAFETARAA--DPDAKLYINDYN 174 (303)
T ss_dssp HHHHHHHHH--CTTSEEEEEESC
T ss_pred HHHHHHHHH--CCCCEEEecccc
Confidence 666655433 455555544665
No 5
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=18.10 E-value=1.8e+02 Score=30.32 Aligned_cols=88 Identities=13% Similarity=0.211 Sum_probs=48.1
Q ss_pred EEeecccceeeeeCCCCCcC-CCCcccCCCchHHHHHHHHHHhhhhcCC-ce---EEec-cccCC-------------Ch
Q psy8439 158 VQIRGSIPLYWQQYPNLKLK-PPPKIIQENNNMEAVSKHFKSQEPYYGY-QV---ILNL-IDQHG-------------DE 218 (671)
Q Consensus 158 VQiRGSVPlfW~Q~~~l~~k-P~~~i~~~~~~~~a~~kHF~~L~~~YG~-~~---~VNL-l~~kg-------------~E 218 (671)
+.+||-..+.=+|.|..-.+ +.-.....++-.+++++|++....+|+. +. +||= ++..| .|
T Consensus 75 i~vrgHtLvWh~q~P~W~~~~~~g~~~~~~~l~~~~~~~I~~v~~rYkg~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~ 154 (331)
T 3emz_A 75 IGVRGHTLVWHNQTPAWMFEDASGGTASREMMLSRLKQHIDTVVGRYKDQIYAWDVVNEAIEDKTDLIMRDTKWLRLLGE 154 (331)
T ss_dssp CEEEECCSBCSSSCCGGGGBCTTSSBCCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCSSTTCCBCCCHHHHHTCT
T ss_pred CEEeeeeeeccccCcHhHhccccCCCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEeccccCCCCCccccCCchhhhcCH
Confidence 34799866543566643211 0001111223467899999999999965 54 4552 22211 24
Q ss_pred hhHHHHHHHHHHHhCCCCcceeehhHHHH
Q psy8439 219 GDIEKAYRTSIRILNSQRVQYEAFDFHKE 247 (671)
Q Consensus 219 ~~L~~ay~~~v~~l~~~~i~y~~fDfh~~ 247 (671)
.-+..||+.+-+. +|+.+...=||+-+
T Consensus 155 ~~i~~aF~~Ar~a--dP~a~L~~NDyn~~ 181 (331)
T 3emz_A 155 DYLVQAFNMAHEA--DPNALLFYNDYNET 181 (331)
T ss_dssp THHHHHHHHHHHH--CTTSEEEEEESSCS
T ss_pred HHHHHHHHHHHhh--CCCceEEecccccc
Confidence 4566777776554 45555544455543
No 6
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=14.12 E-value=2.9e+02 Score=29.14 Aligned_cols=85 Identities=11% Similarity=0.175 Sum_probs=45.8
Q ss_pred EeecccceeeeeCCCCCcC-CCCcccCCCchHHHHHHHHHHhhhhcC-CceEEeccc----cCC-----------ChhhH
Q psy8439 159 QIRGSIPLYWQQYPNLKLK-PPPKIIQENNNMEAVSKHFKSQEPYYG-YQVILNLID----QHG-----------DEGDI 221 (671)
Q Consensus 159 QiRGSVPlfW~Q~~~l~~k-P~~~i~~~~~~~~a~~kHF~~L~~~YG-~~~~VNLl~----~kg-----------~E~~L 221 (671)
.+||-.++.=+|.|..-.+ |.-.....+.-..++++|++.+.++|+ .+...+.+| ..| .+.-+
T Consensus 100 ~vrgHtlvW~~q~P~W~~~d~~g~~~~~~~~~~~~~~~I~~v~~rY~g~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i 179 (378)
T 1ur1_A 100 HMVGHTLVWHSQIHDEVFKNADGSYISKAALQKKMEEHITTLAGRYKGKLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFI 179 (378)
T ss_dssp EEEEEEEECSSSSCGGGTBCTTSCBCCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCTTSSBCCCHHHHHHTTHHH
T ss_pred EEEeecccccccCchhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCcceEEEeecccccCCCCccCChhhhhccHHHH
Confidence 3788877744565543211 110111222346789999999999996 455433333 211 13345
Q ss_pred HHHHHHHHHHhCCCCcceeehhHH
Q psy8439 222 EKAYRTSIRILNSQRVQYEAFDFH 245 (671)
Q Consensus 222 ~~ay~~~v~~l~~~~i~y~~fDfh 245 (671)
..+|+.+=+. +|+.+...=||+
T Consensus 180 ~~af~~Ar~~--dP~a~L~~Ndyn 201 (378)
T 1ur1_A 180 YNAFTLANEV--DPKAHLMYNDYN 201 (378)
T ss_dssp HHHHHHHHHH--CTTSEEEEEESS
T ss_pred HHHHHHHHHh--CCCCEEEecccc
Confidence 5666665433 455655555665
No 7
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A
Probab=14.11 E-value=1.4e+02 Score=30.65 Aligned_cols=79 Identities=20% Similarity=0.284 Sum_probs=45.2
Q ss_pred eecccceeee-eCCCCCcCCCCcccCCCchHHHHHHHHHHhhhhcC-Cce---EEe-ccccCC------------ChhhH
Q psy8439 160 IRGSIPLYWQ-QYPNLKLKPPPKIIQENNNMEAVSKHFKSQEPYYG-YQV---ILN-LIDQHG------------DEGDI 221 (671)
Q Consensus 160 iRGSVPlfW~-Q~~~l~~kP~~~i~~~~~~~~a~~kHF~~L~~~YG-~~~---~VN-Ll~~kg------------~E~~L 221 (671)
+||-.++ |. |.|..-.. + ..+.-.+++++|++.+.++|+ .+. ++| -++..| .+.-+
T Consensus 78 v~ghtlv-W~~q~P~W~~~----~-~~~~~~~~~~~~i~~v~~ry~g~i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i 151 (313)
T 1v0l_A 78 VRGHTLA-WHSQQPGWMQS----L-SGSALRQAMIDHINGVMAHYKGKIVQWDVVNEAFADGSSGARRDSNLQRSGNDWI 151 (313)
T ss_dssp EEEEEEE-CSSSCCHHHHT----C-CHHHHHHHHHHHHHHHHHHTTTTCSEEEEEECCBCSSSSCCBCCSHHHHTCTTHH
T ss_pred EEEEeec-CcCcCchhhhc----C-CHHHHHHHHHHHHHHHHHHcCCcceEEeeecccccCCCcccccCcHHHhhhHHHH
Confidence 7888775 64 44432100 1 223356889999999999995 454 455 222221 14557
Q ss_pred HHHHHHHHHHhCCCCcceeehhHHH
Q psy8439 222 EKAYRTSIRILNSQRVQYEAFDFHK 246 (671)
Q Consensus 222 ~~ay~~~v~~l~~~~i~y~~fDfh~ 246 (671)
..+|+.+=+. +|+.+...=||+-
T Consensus 152 ~~af~~Ar~~--dP~a~L~~Ndyn~ 174 (313)
T 1v0l_A 152 EVAFRTARAA--DPSAKLCYNDYNV 174 (313)
T ss_dssp HHHHHHHHHH--CTTSEEEEEESSC
T ss_pred HHHHHHHHhh--CCCCEEEEecccc
Confidence 7778776543 4555544445553
No 8
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A
Probab=12.93 E-value=3.5e+02 Score=27.79 Aligned_cols=49 Identities=14% Similarity=0.243 Sum_probs=28.0
Q ss_pred eecccceeeeeCCCCCcC-CCCcccCCCchHHHHHHHHHHhhhhcC-CceE
Q psy8439 160 IRGSIPLYWQQYPNLKLK-PPPKIIQENNNMEAVSKHFKSQEPYYG-YQVI 208 (671)
Q Consensus 160 iRGSVPlfW~Q~~~l~~k-P~~~i~~~~~~~~a~~kHF~~L~~~YG-~~~~ 208 (671)
+||-.++.=+|.|..-.+ |.-.....+.-.+++++|.+.+.++|+ .+..
T Consensus 78 v~ghtlvW~~q~P~W~~~~~~g~~~~~~~~~~~~~~~i~~v~~rY~g~v~~ 128 (331)
T 1n82_A 78 VRGHTLVWHNQTPDWVFQDGQGHFVSRDVLLERMKCHISTVVRRYKGKIYC 128 (331)
T ss_dssp EEEEEEEESSSCCGGGGBCSSSSBCCHHHHHHHHHHHHHHHHHHHTTTCCE
T ss_pred EEEEeeecCCCCChhhccCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 688777733555542211 110111122346789999999999995 4543
No 9
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A*
Probab=12.62 E-value=1.4e+02 Score=30.42 Aligned_cols=48 Identities=13% Similarity=0.218 Sum_probs=28.9
Q ss_pred eecccceeeeeCCCCCcCCCCcccCCCchHHHHHHHHHHhhhhcCC-ceEEecc
Q psy8439 160 IRGSIPLYWQQYPNLKLKPPPKIIQENNNMEAVSKHFKSQEPYYGY-QVILNLI 212 (671)
Q Consensus 160 iRGSVPlfW~Q~~~l~~kP~~~i~~~~~~~~a~~kHF~~L~~~YG~-~~~VNLl 212 (671)
+||-.++..+|.|..- .. ...++..+++++|.+.+.++|+. +.....+
T Consensus 77 v~ghtl~W~~~~P~W~-~~----~~~~~~~~~~~~~i~~v~~ry~g~v~~WdV~ 125 (315)
T 3cui_A 77 LYGHTLVWHSQLPDWA-KN----LNGSAFESAMVNHVTKVADHFEGKVASWDVV 125 (315)
T ss_dssp EEEEEEEESSSCCHHH-HT----CCHHHHHHHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEeeecCCCCCHHH-hc----CCHHHHHHHHHHHHHHHHHHcCCceEEEEee
Confidence 5787765445644311 00 12234568899999999999964 5444443
No 10
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3
Probab=12.27 E-value=1.7e+02 Score=30.37 Aligned_cols=81 Identities=17% Similarity=0.317 Sum_probs=43.7
Q ss_pred eecccceeee-eCCCCCcCCCCcccCCCchHHHHHHHHHHhhhhcCC-ce---EEe-ccccCCC------------hhhH
Q psy8439 160 IRGSIPLYWQ-QYPNLKLKPPPKIIQENNNMEAVSKHFKSQEPYYGY-QV---ILN-LIDQHGD------------EGDI 221 (671)
Q Consensus 160 iRGSVPlfW~-Q~~~l~~kP~~~i~~~~~~~~a~~kHF~~L~~~YG~-~~---~VN-Ll~~kg~------------E~~L 221 (671)
+||-.++ |. |.|..-... . ...+...+++++|.+.+.++|+. +. ++| -+...|. +.-+
T Consensus 103 v~ghtlv-W~~q~P~W~~~~--~-~~~~~~~~~~~~~i~~v~~ry~g~v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i 178 (347)
T 1xyz_A 103 MRGHTLI-WHNQNPSWLTNG--N-WNRDSLLAVMKNHITTVMTHYKGKIVEWDVANECMDDSGNGLRSSIWRNVIGQDYL 178 (347)
T ss_dssp EEEEEEE-CSSSCCHHHHTS--C-CCHHHHHHHHHHHHHHHHHHTTTTCSEEEEEESCBCTTSSSBCCCHHHHHHCTTHH
T ss_pred EEEEeee-ccccCcHHHhcC--C-CCHHHHHHHHHHHHHHHHHHhCCeeEEEEeecccccCCCcccccChHHHhcCHHHH
Confidence 6777766 64 444211110 0 01234568899999999999965 44 455 2222222 3456
Q ss_pred HHHHHHHHHHhCCCCcceeehhHHH
Q psy8439 222 EKAYRTSIRILNSQRVQYEAFDFHK 246 (671)
Q Consensus 222 ~~ay~~~v~~l~~~~i~y~~fDfh~ 246 (671)
..+|+.+=+. +|+.+...=||+-
T Consensus 179 ~~af~~Ar~~--dP~a~L~~Ndyn~ 201 (347)
T 1xyz_A 179 DYAFRYAREA--DPDALLFYNDYNI 201 (347)
T ss_dssp HHHHHHHHHH--CTTSEEEEEESSC
T ss_pred HHHHHHHHhh--CCCCEEEeccCcc
Confidence 6777665443 4555544445543
Done!