BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8442
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6IV77|TAZ_MACMU Tafazzin OS=Macaca mulatta GN=TAZ PE=2 SV=1
Length = 262
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 43/70 (61%)
Query: 48 GMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALTQFIQDELY 107
GM VLPN PPY+ R G+ +T +G P PIL LRA N S E+R ALT FIQ+E
Sbjct: 186 GMNDVLPNSPPYFPRFGQKITVLIGKPFSALPILERLRAENKSAVEMRKALTDFIQEEFQ 245
Query: 108 ALKARTEDLH 117
LK + E LH
Sbjct: 246 RLKTQAEQLH 255
>sp|Q6IV84|TAZ_PANTR Tafazzin OS=Pan troglodytes GN=TAZ PE=3 SV=1
Length = 292
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%)
Query: 48 GMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALTQFIQDELY 107
GM VLPN PPY+ R G+ +T +G P P+L LRA N S E+R ALT FIQ+E
Sbjct: 216 GMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQ 275
Query: 108 ALKARTEDLH 117
LK + E LH
Sbjct: 276 HLKTQAEQLH 285
>sp|Q16635|TAZ_HUMAN Tafazzin OS=Homo sapiens GN=TAZ PE=1 SV=1
Length = 292
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%)
Query: 48 GMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALTQFIQDELY 107
GM VLPN PPY+ R G+ +T +G P P+L LRA N S E+R ALT FIQ+E
Sbjct: 216 GMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQ 275
Query: 108 ALKARTEDLH 117
LK + E LH
Sbjct: 276 HLKTQAEQLH 285
>sp|Q6IV78|TAZ_SAISC Tafazzin OS=Saimiri sciureus GN=TAZ PE=3 SV=1
Length = 262
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%)
Query: 48 GMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALTQFIQDELY 107
GM VLPN PPY+ R G+ +T +G P P+L LRA N S E+R ALT FIQ+E
Sbjct: 186 GMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQ 245
Query: 108 ALKARTEDLH 117
LK + E LH
Sbjct: 246 RLKTQAEQLH 255
>sp|Q6IV76|TAZ_ERYPA Tafazzin OS=Erythrocebus patas GN=TAZ PE=2 SV=1
Length = 262
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%)
Query: 48 GMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALTQFIQDELY 107
GM VLPN PPY+ R G+ +T +G P P+L LRA N S E+R ALT FIQ+E
Sbjct: 186 GMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQ 245
Query: 108 ALKARTEDLH 117
LK + E LH
Sbjct: 246 RLKTQAEQLH 255
>sp|Q6IV83|TAZ_GORGO Tafazzin OS=Gorilla gorilla gorilla GN=TAZ PE=3 SV=1
Length = 292
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%)
Query: 48 GMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALTQFIQDELY 107
GM VLPN PPY+ R G+ +T +G P P+L LRA N S E+R ALT FIQ+E
Sbjct: 216 GMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALTDFIQEEFQ 275
Query: 108 ALKARTEDLH 117
LK + E LH
Sbjct: 276 RLKTQAEQLH 285
>sp|Q6IV82|TAZ_PONPY Tafazzin OS=Pongo pygmaeus GN=TAZ PE=3 SV=1
Length = 292
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 42/70 (60%)
Query: 48 GMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALTQFIQDELY 107
GM VLPN PPY+ R G+ +T +G P P+L LRA N S E+R LT FIQ+E
Sbjct: 216 GMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKVLTDFIQEEFQ 275
Query: 108 ALKARTEDLH 117
LK + E LH
Sbjct: 276 RLKTQAEQLH 285
>sp|Q9V6G5|TAZ_DROME Tafazzin homolog OS=Drosophila melanogaster GN=Taz PE=2 SV=2
Length = 378
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%)
Query: 48 GMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALTQFIQDELY 107
GM+ +LPN PY ++RGK +T +VG P+DL + DL+ + + R +T IQ+
Sbjct: 305 GMDDLLPNVEPYVIQRGKQVTLNVGQPLDLNDFILDLKKRQVPEPTARKLITDKIQEAFR 364
Query: 108 ALKARTEDLH 117
L+A TE LH
Sbjct: 365 DLRAETEKLH 374
>sp|Q7RZC1|TRMB_NEUCR tRNA (guanine-N(7)-)-methyltransferase OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=trm-8 PE=3 SV=1
Length = 293
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 75 IDLAPILTDLRAANLSDREVRAALTQFIQDELYALKARTED 115
I LAP+L + L E+R ++TQF++D + AL+ + E+
Sbjct: 113 IALAPVLPETLVLGL---EIRVSVTQFVEDRIKALRVQNEE 150
>sp|Q5AC48|ARP4_CANAL Actin-related protein 4 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ARP4 PE=3 SV=2
Length = 469
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Query: 13 LRSGMET-----VLPNEPLYYLRSGMETVLPNEPSYYLRSGMETVLPNEPPYYLRRGKTL 67
L+S M+T L NE YL + V+ EPS+ ++S + T P+ P Y L+ T+
Sbjct: 174 LKSSMKTNYGGKFLSNEIQDYLIDTKKVVM--EPSFKIKSKIPTTYPDPPKYELKNNNTI 231
>sp|Q7YR40|MDC1_PANTR Mediator of DNA damage checkpoint protein 1 OS=Pan troglodytes
GN=MDC1 PE=3 SV=1
Length = 2171
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 2 ETVLPNEPSYYLRSGMETVLPNEPLYYLRSGM---------ETVLPNEPSYYLRSGMETV 52
ETV+P P + + + +EP G ETV+P P + +
Sbjct: 1569 ETVVPTAPELQASASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPTAPELQPSTSTDQP 1628
Query: 53 LPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAAN 88
+ EP RG+T V P + PI +L+ +
Sbjct: 1629 VTPEPTSQATRGRTNRSSVKTPESIVPIAPELQPST 1664
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 2 ETVLPNEPSYYLRSGMETVLPNEPLYYLRSGM---------ETVLPNEPSYYLRSGMETV 52
ET++P P + + + EP G ETV+P P + +
Sbjct: 1487 ETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETVVPTAPELQPSTSTDQP 1546
Query: 53 LPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREVRAALT 99
+ EP + RG+T V P + P +L+A+ +D+ V + T
Sbjct: 1547 VTPEPTSQVTRGRTDRSSVKTPETVVPTAPELQASASTDQPVTSEPT 1593
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 9/102 (8%)
Query: 2 ETVLPNEPSYYLRSGMETVLPNEPLYYLRSGM---------ETVLPNEPSYYLRSGMETV 52
ETV+P P + + + EP + G ETV+P P + +
Sbjct: 1528 ETVVPTAPELQPSTSTDQPVTPEPTSQVTRGRTDRSSVKTPETVVPTAPELQASASTDQP 1587
Query: 53 LPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDREV 94
+ +EP RG+ V P + P +L+ + +D+ V
Sbjct: 1588 VTSEPTSRTTRGRKNRSSVKTPETVVPTAPELQPSTSTDQPV 1629
>sp|Q08269|ALR1_YEAST Magnesium transporter ALR1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ALR1 PE=1 SV=1
Length = 859
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 18 ETVLPNEPLYYLRSGMETVLPNEPSYYLRSGMETVLPNEPPYYLRRGKTL--TFHVGDP 74
E + N+P Y G + +PN S++ ETV ++ P + G+T F G+P
Sbjct: 395 ENIPSNDPAYCSYQGTDFQIPNRFSFFCSESDETVHASDIPSLVSEGQTFYELFRGGEP 453
>sp|Q5H737|TRMB_COLOR tRNA (guanine-N(7)-)-methyltransferase OS=Colletotrichum orbiculare
(strain 104-T / ATCC 96160 / CBS 514.97 / LARS 414 /
MAFF 240422) GN=TRM8 PE=3 SV=1
Length = 286
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Query: 75 IDLAPILTDLRAANLSDREVRAALTQFIQDELYALKARTE 114
+ LAP++ + A L E+R ++T+++Q+++ AL+A+ E
Sbjct: 112 VALAPLMPETLALGL---EIRTSVTEYVQEKIRALRAQNE 148
>sp|Q14676|MDC1_HUMAN Mediator of DNA damage checkpoint protein 1 OS=Homo sapiens GN=MDC1
PE=1 SV=3
Length = 2089
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 2 ETVLPNEPSYYLRSGMETVLPNEPLYYLRSGM---------ETVLPNEPSYYLRSGMETV 52
ETV+P P + + + +EP G ETV+P P + +
Sbjct: 1487 ETVVPTAPELQASASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPSTSTDQP 1546
Query: 53 LPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAAN 88
+ EP RG+T V P + PI +L+ +
Sbjct: 1547 VTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPST 1582
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 34 ETVLPNEPSYYLRSGMETVLPNEPPYYLRRGKTLTFHVGDPIDLAPILTDLRAANLSDRE 93
E V+P P + + + +EP Y RG+ V P + P +LR + +DR
Sbjct: 1241 EPVVPTAPELQPSTSTDQPVTSEPTYQATRGRKNRSSVKTPEPVVPTAPELRPSTSTDRP 1300
Query: 94 V 94
V
Sbjct: 1301 V 1301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,947,130
Number of Sequences: 539616
Number of extensions: 1918535
Number of successful extensions: 3951
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3895
Number of HSP's gapped (non-prelim): 71
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)