Query psy8443
Match_columns 330
No_of_seqs 272 out of 2421
Neff 11.0
Searched_HMMs 29240
Date Fri Aug 16 18:59:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8443.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8443hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nt0_A MAsp2, mannose-binding 100.0 4.3E-52 1.5E-56 345.8 27.5 255 63-330 4-276 (286)
2 3dem_A Complement factor MAsp- 100.0 3.6E-51 1.2E-55 339.7 26.9 257 61-330 3-277 (278)
3 4aqb_A Mannan-binding lectin s 100.0 2.1E-47 7.3E-52 328.8 27.6 260 63-330 5-277 (361)
4 4gz9_A Neuropilin-1, A5 protei 100.0 4.5E-45 1.6E-49 330.0 26.4 231 57-330 7-246 (577)
5 3kq4_B Cubilin; protein-protei 100.0 4.2E-43 1.4E-47 310.9 24.7 231 57-330 115-345 (457)
6 3kq4_B Cubilin; protein-protei 100.0 7.5E-43 2.6E-47 309.3 25.6 222 57-329 232-456 (457)
7 2qqk_A Neuropilin-2; VEGF rece 100.0 6.1E-42 2.1E-46 311.4 28.5 232 57-330 4-244 (579)
8 2wno_A Tumor necrosis factor-i 100.0 1.6E-30 5.6E-35 193.4 15.8 114 217-330 5-118 (149)
9 3poj_A Mannan-binding lectin s 100.0 2.2E-29 7.6E-34 179.9 12.3 110 217-330 2-115 (115)
10 1szb_A Mannose binding lectin- 100.0 1.1E-27 3.8E-32 183.2 16.0 147 62-216 7-167 (170)
11 1nzi_A Complement C1S componen 99.9 4.4E-27 1.5E-31 178.3 13.1 145 64-216 2-158 (159)
12 1spp_B Major seminal plasma gl 99.9 1.8E-26 6.1E-31 164.5 11.9 103 217-330 7-109 (116)
13 1spp_A Major seminal plasma gl 99.9 1.8E-26 6.3E-31 162.4 11.3 102 217-330 4-105 (109)
14 1nzi_A Complement C1S componen 99.9 1.9E-26 6.4E-31 174.8 11.3 103 224-330 2-114 (159)
15 4aqb_A Mannan-binding lectin s 99.9 3.1E-25 1.1E-29 190.7 20.2 198 3-211 113-320 (361)
16 1szb_A Mannose binding lectin- 99.9 7.9E-26 2.7E-30 172.9 13.8 106 221-330 6-121 (170)
17 1sfp_A ASFP; spermadhesin, bov 99.9 6.4E-26 2.2E-30 161.2 12.4 104 216-330 7-110 (114)
18 1nt0_A MAsp2, mannose-binding 99.9 3.4E-25 1.2E-29 183.9 17.3 161 2-174 111-276 (286)
19 3dem_A Complement factor MAsp- 99.9 5.3E-25 1.8E-29 182.4 17.7 161 2-174 112-277 (278)
20 2qqm_A Neuropilin-1; VEGF rece 99.9 2.6E-25 8.9E-30 196.2 14.0 114 217-330 9-128 (450)
21 2qqo_A Neuropilin-2; VEGF rece 99.9 8.3E-25 2.8E-29 193.4 15.5 114 217-330 6-125 (460)
22 4gz9_A Neuropilin-1, A5 protei 99.9 8.3E-24 2.8E-28 191.4 12.7 113 217-330 7-122 (577)
23 2wno_A Tumor necrosis factor-i 99.9 6.9E-23 2.4E-27 152.3 14.9 138 56-197 4-145 (149)
24 2qqk_A Neuropilin-2; VEGF rece 99.9 2E-22 6.7E-27 183.3 13.3 112 217-329 4-118 (579)
25 3poj_A Mannan-binding lectin s 99.8 1.3E-19 4.6E-24 129.0 10.8 111 57-173 2-114 (115)
26 2qqo_A Neuropilin-2; VEGF rece 99.8 4.8E-18 1.6E-22 150.2 18.1 120 56-175 5-126 (460)
27 1spp_A Major seminal plasma gl 99.7 1.6E-17 5.3E-22 116.6 10.5 104 56-175 3-106 (109)
28 2qqm_A Neuropilin-1; VEGF rece 99.7 2.9E-17 9.9E-22 144.9 14.5 120 56-175 8-129 (450)
29 1spp_B Major seminal plasma gl 99.7 3E-17 1E-21 116.6 11.2 106 55-175 5-110 (116)
30 1sfp_A ASFP; spermadhesin, bov 99.7 9.7E-17 3.3E-21 113.7 11.4 105 56-175 7-111 (114)
31 1lmj_A Fibrillin 1; EGF, calci 99.6 4.8E-16 1.6E-20 103.9 5.3 42 174-215 44-86 (86)
32 1uzk_A Fibrillin-1; glycoprote 99.5 1.2E-14 4.2E-19 109.7 8.4 49 167-215 109-162 (162)
33 2w2n_E LDL receptor, low-densi 99.5 1.8E-15 6.2E-20 104.9 2.3 41 7-49 26-66 (107)
34 2w86_A Fibrillin-1, fibrillin1 99.5 2.3E-14 7.8E-19 106.4 7.4 54 162-215 90-147 (147)
35 1emn_A Fibrillin; extracellula 99.5 9.6E-15 3.3E-19 96.4 4.4 40 7-49 1-41 (82)
36 1x7a_L Coagulation factor IX, 99.5 6.8E-14 2.3E-18 103.0 7.5 56 177-237 86-142 (146)
37 1z6c_A Vitamin K-dependent pro 99.5 1.6E-14 5.5E-19 96.6 2.4 41 9-49 1-42 (87)
38 1dx5_I Thrombomodulin; serine 99.4 8.2E-14 2.8E-18 98.9 5.3 49 165-214 66-118 (118)
39 3v65_B Low-density lipoprotein 99.4 2.9E-14 1E-18 123.5 1.8 41 9-49 1-41 (386)
40 1aut_L Activated protein C; se 99.4 1.6E-13 5.5E-18 96.8 4.7 41 176-216 54-94 (114)
41 2vj3_A Neurogenic locus notch 99.4 9.6E-13 3.3E-17 96.0 7.8 40 7-50 1-42 (135)
42 1nfu_B Coagulation factor XA, 99.3 2.4E-13 8.3E-18 104.1 2.4 40 177-216 82-121 (195)
43 3p5b_L Low density lipoprotein 99.3 9.4E-13 3.2E-17 114.5 6.2 42 175-217 39-80 (400)
44 2bou_A EGF-like module contain 99.3 1.5E-12 5.2E-17 96.1 5.8 44 173-216 93-138 (143)
45 1kli_L Factor VIIA; extrinsic 99.3 2.9E-12 1E-16 80.3 3.6 44 8-51 2-46 (69)
46 2vh0_B Activated factor XA lig 99.2 1.8E-12 6.2E-17 94.1 2.4 40 177-216 82-121 (134)
47 2jkh_L Factor X light chain; p 99.2 7.1E-12 2.4E-16 75.3 3.9 41 11-51 1-41 (55)
48 2c4f_L Coagulation factor VII 99.2 9.9E-12 3.4E-16 91.2 5.0 38 7-50 43-82 (142)
49 1apq_A Complement protease C1R 99.2 1.9E-11 6.5E-16 73.3 4.6 42 9-50 2-51 (53)
50 3m0c_C LDL receptor, low-densi 99.1 5.2E-11 1.8E-15 111.4 7.2 42 175-217 351-392 (791)
51 1z1y_A Ookinete surface protei 99.1 5.3E-11 1.8E-15 91.9 5.0 38 5-42 38-84 (186)
52 1yo8_A Thrombospondin-2; EGF, 99.0 2.2E-10 7.6E-15 102.9 6.9 44 9-60 1-48 (634)
53 1n7d_A LDL receptor, low-densi 99.0 8.4E-11 2.9E-15 109.3 3.4 39 10-49 293-331 (699)
54 1kig_L Factor XA; glycoprotein 99.0 1.3E-10 4.4E-15 68.3 2.5 39 14-52 1-39 (51)
55 2bz6_L Blood coagulation facto 99.0 3.7E-10 1.3E-14 66.9 3.8 38 14-51 2-40 (53)
56 4d90_A EGF-like repeat and dis 99.0 6.5E-10 2.2E-14 82.0 5.2 44 163-206 83-127 (143)
57 1lmj_A Fibrillin 1; EGF, calci 98.9 2.7E-10 9.4E-15 75.7 2.7 45 5-49 40-85 (86)
58 2wph_E Coagulation factor IXA 98.9 1E-09 3.4E-14 66.5 3.6 39 14-52 2-41 (59)
59 3h5c_B Vitamin K-dependent pro 98.9 9.4E-10 3.2E-14 92.6 3.9 42 175-216 42-84 (317)
60 1z1y_A Ookinete surface protei 98.9 6.4E-09 2.2E-13 80.2 7.9 52 164-216 78-136 (186)
61 1kli_L Factor VIIA; extrinsic 98.8 1.9E-09 6.4E-14 67.5 2.5 43 174-216 3-46 (69)
62 2jkh_L Factor X light chain; p 98.8 2.1E-09 7.3E-14 64.4 2.4 41 176-216 1-41 (55)
63 2w86_A Fibrillin-1, fibrillin1 98.8 3.5E-09 1.2E-13 78.3 3.5 46 4-49 100-146 (147)
64 1apq_A Complement protease C1R 98.7 6E-09 2.1E-13 62.2 3.2 43 174-216 2-52 (53)
65 2kl7_A Fibulin-4; secreted, ca 98.7 9.9E-09 3.4E-13 64.8 4.0 39 9-47 1-42 (71)
66 2w2n_E LDL receptor, low-densi 98.7 2.7E-09 9.3E-14 73.7 0.2 44 5-49 63-106 (107)
67 1kig_L Factor XA; glycoprotein 98.6 1.4E-08 4.8E-13 59.5 2.5 38 179-216 1-38 (51)
68 1emn_A Fibrillin; extracellula 98.6 2.7E-08 9.2E-13 65.3 3.6 44 4-49 37-81 (82)
69 1x7a_L Coagulation factor IX, 98.5 1.3E-08 4.5E-13 74.7 0.5 33 7-41 44-78 (146)
70 2vh0_B Activated factor XA lig 98.5 6.5E-08 2.2E-12 70.0 3.9 47 5-51 73-121 (134)
71 1z6c_A Vitamin K-dependent pro 98.5 2E-08 7E-13 66.7 1.0 44 5-50 39-84 (87)
72 2bz6_L Blood coagulation facto 98.5 4.7E-08 1.6E-12 57.8 2.3 38 179-216 2-40 (53)
73 1nfu_B Coagulation factor XA, 98.5 6.8E-08 2.3E-12 73.9 3.7 47 5-51 73-121 (195)
74 1edm_B Factor IX; epidermal gr 98.5 1.3E-07 4.3E-12 52.2 3.8 35 9-49 1-37 (39)
75 1dx5_I Thrombomodulin; serine 98.5 3.5E-08 1.2E-12 69.7 1.5 44 5-49 74-118 (118)
76 2wph_E Coagulation factor IXA 98.5 7.5E-08 2.6E-12 58.2 2.5 38 179-216 2-40 (59)
77 2bou_A EGF-like module contain 98.5 8.2E-08 2.8E-12 70.5 3.2 46 5-50 90-137 (143)
78 3v65_B Low-density lipoprotein 98.4 5.6E-08 1.9E-12 84.0 1.8 47 3-50 36-82 (386)
79 1gl4_A Nidogen-1, entactin; im 98.4 5.5E-08 1.9E-12 77.9 1.2 42 9-52 3-46 (285)
80 1aut_L Activated protein C; se 98.4 1.8E-07 6.3E-12 65.6 3.1 45 7-51 47-94 (114)
81 1yo8_A Thrombospondin-2; EGF, 98.4 7E-07 2.4E-11 80.5 7.5 38 5-42 38-81 (634)
82 3p5b_L Low density lipoprotein 98.3 2.5E-07 8.6E-12 80.3 2.8 64 12-76 1-66 (400)
83 3v64_C Agrin; beta propeller, 98.2 4.3E-07 1.5E-11 77.3 2.0 39 11-50 1-39 (349)
84 1egf_A Epidermal growth factor 98.2 1.6E-06 5.4E-11 51.2 3.7 37 10-50 2-43 (53)
85 3f1s_B Vitamin K-dependent pro 98.2 5E-07 1.7E-11 74.5 1.9 42 10-51 1-43 (283)
86 2c4f_L Coagulation factor VII 98.1 8.9E-07 3.1E-11 64.7 2.4 47 5-51 78-129 (142)
87 3u7u_G Neuregulin 1; signaling 98.1 2.4E-06 8.3E-11 50.4 3.5 36 9-50 6-48 (55)
88 2kl7_A Fibulin-4; secreted, ca 98.1 3.2E-06 1.1E-10 53.2 3.8 38 175-212 2-42 (71)
89 3m0c_C LDL receptor, low-densi 98.0 1.2E-06 4.1E-11 82.2 2.0 47 4-51 345-391 (791)
90 1tpg_A T-plasminogen activator 98.0 1.9E-06 6.6E-11 57.5 2.4 37 175-215 47-85 (91)
91 3h5c_B Vitamin K-dependent pro 98.0 2.7E-06 9.4E-11 71.3 3.6 47 5-51 36-84 (317)
92 2k2s_B Micronemal protein 6; m 98.0 1.8E-06 6.1E-11 52.2 1.6 38 7-49 7-48 (61)
93 4fbr_A Lectin, myxobacterial h 97.8 4E-06 1.4E-10 66.9 1.1 40 5-50 93-134 (267)
94 1edm_B Factor IX; epidermal gr 97.8 1.1E-05 3.9E-10 44.1 2.6 32 175-206 2-33 (39)
95 1k36_A Epiregulin; EGF-like fo 97.8 2.1E-05 7.3E-10 44.6 3.7 38 9-50 1-42 (46)
96 1n7d_A LDL receptor, low-densi 97.8 4.4E-06 1.5E-10 77.7 1.3 47 4-51 327-373 (699)
97 2vj3_A Neurogenic locus notch 97.7 5.2E-05 1.8E-09 54.7 5.7 38 7-50 40-80 (135)
98 4d90_A EGF-like repeat and dis 97.7 2.3E-05 7.9E-10 57.3 3.4 40 5-50 90-132 (143)
99 4a0p_A LRP6, LRP-6, low-densit 97.7 2.2E-05 7.7E-10 72.0 3.7 41 10-50 264-305 (628)
100 3v64_C Agrin; beta propeller, 97.6 2.1E-05 7.3E-10 66.8 2.0 40 176-216 1-40 (349)
101 3u7u_G Neuregulin 1; signaling 97.5 8.2E-05 2.8E-09 43.8 3.7 38 174-215 6-48 (55)
102 1uzk_A Fibrillin-1; glycoprote 97.5 4.6E-05 1.6E-09 57.0 3.1 41 175-216 2-43 (162)
103 1gl4_A Nidogen-1, entactin; im 97.5 2.1E-05 7.3E-10 63.1 1.2 41 174-216 3-45 (285)
104 3f1s_B Vitamin K-dependent pro 97.5 5.1E-05 1.7E-09 62.4 3.4 48 175-222 1-52 (283)
105 2k2s_B Micronemal protein 6; m 97.5 3.4E-05 1.2E-09 46.6 1.4 34 173-206 8-43 (61)
106 3sov_A LRP-6, low-density lipo 97.5 5.3E-05 1.8E-09 63.4 3.0 42 10-51 266-309 (318)
107 1tpg_A T-plasminogen activator 97.4 0.00011 3.9E-09 48.8 3.8 38 7-50 42-85 (91)
108 1a3p_A Epidermal growth factor 97.4 0.00013 4.4E-09 41.2 3.4 35 12-50 1-40 (45)
109 4fbr_A Lectin, myxobacterial h 97.3 5.1E-06 1.7E-10 66.2 -4.9 35 174-208 97-131 (267)
110 1egf_A Epidermal growth factor 97.2 0.00022 7.5E-09 41.9 3.1 37 175-215 2-43 (53)
111 1hae_A Heregulin-alpha; growth 97.1 0.00027 9.4E-09 43.2 2.5 34 11-50 6-46 (63)
112 1nql_B Epidermal growth factor 96.9 0.00052 1.8E-08 40.1 2.4 35 12-50 4-43 (53)
113 4a0p_A LRP6, LRP-6, low-densit 96.9 0.0029 9.8E-08 58.1 8.4 43 175-217 264-307 (628)
114 1a3p_A Epidermal growth factor 96.8 0.0013 4.3E-08 37.0 3.6 34 178-215 2-40 (45)
115 1ijq_A LDL receptor, low-densi 96.8 0.00059 2E-08 57.0 3.0 41 175-215 266-315 (316)
116 3sov_A LRP-6, low-density lipo 96.7 0.00065 2.2E-08 56.8 2.8 43 176-218 267-311 (318)
117 1k36_A Epiregulin; EGF-like fo 96.6 0.00096 3.3E-08 37.7 2.0 36 175-215 2-42 (46)
118 1g1s_A P-selectin; selectin, l 96.6 0.0015 5.1E-08 48.6 3.6 40 11-60 119-160 (162)
119 3s94_A LRP-6, low-density lipo 96.6 0.00089 3E-08 61.3 2.7 42 175-216 577-618 (619)
120 3s94_A LRP-6, low-density lipo 96.5 0.0012 4.1E-08 60.5 2.9 42 10-51 271-314 (619)
121 3fcs_B Integrin beta-3; beta p 96.3 0.0024 8.3E-08 58.6 3.7 52 160-219 545-604 (690)
122 1hae_A Heregulin-alpha; growth 96.2 0.0025 8.5E-08 38.9 2.3 37 175-215 5-46 (63)
123 3ca7_A Protein spitz; argos, E 96.1 0.0045 1.5E-07 36.0 3.0 27 20-50 15-47 (52)
124 1q4g_A Prostaglandin G/H synth 95.3 0.0098 3.4E-07 53.3 3.5 34 11-50 2-39 (553)
125 2ygq_A WIF-1, WNT inhibitory f 95.3 0.0057 2E-07 51.0 1.7 34 10-50 142-179 (324)
126 3ltf_D Protein spitz; receptor 95.0 0.02 6.8E-07 34.0 2.9 27 20-50 15-47 (58)
127 3nt1_A Prostaglandin-endoperox 95.0 0.019 6.5E-07 51.6 4.1 34 11-50 1-38 (587)
128 2vj2_A Jagged-1; signalling, p 94.5 0.0073 2.5E-07 45.2 0.2 46 160-206 114-163 (169)
129 1g1s_A P-selectin; selectin, l 94.1 0.028 9.6E-07 41.6 2.7 37 176-216 119-155 (162)
130 2ygq_A WIF-1, WNT inhibitory f 94.0 0.036 1.2E-06 46.1 3.4 44 161-215 262-307 (324)
131 1nql_B Epidermal growth factor 93.4 0.059 2E-06 31.3 2.7 24 188-215 18-43 (53)
132 3cfw_A L-selectin; EGF, cell a 93.3 0.11 3.7E-06 38.4 4.8 28 19-50 125-154 (164)
133 3fcs_B Integrin beta-3; beta p 92.9 0.1 3.5E-06 48.0 4.8 31 12-50 484-522 (690)
134 2gy5_A Angiopoietin-1 receptor 92.5 0.17 5.7E-06 43.8 5.5 21 189-216 300-320 (423)
135 1q4g_A Prostaglandin G/H synth 92.3 0.087 3E-06 47.2 3.4 37 176-216 2-40 (553)
136 1xdt_R Hbegf, heparin-binding 91.8 0.093 3.2E-06 33.0 2.2 36 11-50 37-76 (79)
137 2rnl_A Amphiregulin; AR, color 90.8 0.18 6.2E-06 28.7 2.6 37 10-50 8-48 (50)
138 1iox_A Betacellulin; EGF-like 90.7 0.16 5.6E-06 28.9 2.3 28 19-50 14-44 (50)
139 3ca7_A Protein spitz; argos, E 90.6 0.15 5.3E-06 29.3 2.2 25 187-215 19-47 (52)
140 2wg3_C Hedgehog-interacting pr 90.5 0.04 1.4E-06 48.4 -0.6 10 197-206 440-449 (463)
141 3nt1_A Prostaglandin-endoperox 90.4 0.17 5.7E-06 45.6 3.3 37 176-216 1-39 (587)
142 3e50_C Protransforming growth 90.3 0.23 7.9E-06 28.2 2.7 28 19-50 14-44 (50)
143 1n1i_A Merozoite surface prote 89.1 0.26 8.9E-06 32.7 2.6 47 3-49 42-93 (105)
144 1ob1_C Major merozoite surface 87.7 0.27 9.2E-06 32.4 1.9 47 3-49 36-92 (99)
145 3ltf_D Protein spitz; receptor 86.8 0.32 1.1E-05 28.7 1.8 25 187-215 19-47 (58)
146 2fd6_A Urokinase-type plasmino 86.6 0.45 1.6E-05 33.1 2.8 27 20-50 2-33 (122)
147 3asi_A Neurexin-1-alpha; beta- 82.0 6.4 0.00022 33.7 8.7 37 176-216 185-222 (410)
148 3asi_A Neurexin-1-alpha; beta- 81.9 1.1 3.7E-05 38.6 3.7 38 7-50 180-221 (410)
149 3cfw_A L-selectin; EGF, cell a 81.2 0.92 3.2E-05 33.2 2.7 34 178-215 121-154 (164)
150 3k6s_B Integrin beta-2; cell r 80.9 0.97 3.3E-05 41.6 3.1 30 13-50 474-513 (687)
151 3zyj_B Netrin-G1; cell adhesio 79.5 2.2 7.5E-05 36.6 4.7 23 24-50 305-327 (426)
152 1g1t_A E-selectin; EGF, adhesi 79.2 1.1 3.8E-05 32.5 2.5 36 176-215 119-154 (157)
153 3fby_A COMP, cartilage oligome 78.0 2.2 7.4E-05 37.6 4.2 39 10-50 17-59 (551)
154 1ob1_C Major merozoite surface 66.2 3.8 0.00013 26.9 2.3 26 24-51 17-43 (99)
155 1n1i_A Merozoite surface prote 63.4 7.3 0.00025 25.8 3.3 26 24-51 23-49 (105)
156 3qcw_A Neurexin-1-alpha; synap 60.1 6.8 0.00023 39.1 4.0 34 11-50 1017-1053(1245)
157 1e0f_I Haemadin, factor IIA; c 58.8 9.6 0.00033 20.6 2.6 31 190-222 10-40 (57)
158 2i9a_A Urokinase-type plasmino 57.6 7 0.00024 27.9 2.7 27 20-50 14-45 (145)
159 3qcw_A Neurexin-1-alpha; synap 55.5 9 0.00031 38.3 4.0 34 11-50 619-655 (1245)
160 3zyj_B Netrin-G1; cell adhesio 55.5 2.5 8.4E-05 36.3 0.0 20 24-50 378-397 (426)
161 2gy5_A Angiopoietin-1 receptor 53.0 4.7 0.00016 34.8 1.4 25 19-49 250-276 (423)
162 2fd6_A Urokinase-type plasmino 52.6 9.5 0.00032 26.3 2.6 19 188-206 7-28 (122)
163 4aqt_A Laminin subunit gamma-1 51.4 25 0.00086 29.7 5.5 19 27-49 267-285 (375)
164 1b9w_A Protein (merozoite surf 46.9 19 0.00065 23.2 3.0 39 3-41 36-79 (95)
165 3ssb_I IMPI alpha, inducible m 46.9 11 0.00036 19.0 1.6 14 198-211 6-19 (32)
166 2p3f_N Anti-coagulant protein 44.1 13 0.00045 23.2 2.1 19 33-51 48-66 (78)
167 2ygo_A WIF-1, WNT inhibitory f 43.7 11 0.00037 28.2 1.8 27 185-215 150-179 (188)
168 1ccv_A AMCI, chymotrypsin inhi 37.9 18 0.00061 20.7 1.8 17 34-51 36-52 (56)
169 1klo_A Laminin; glycoprotein; 34.6 26 0.00087 25.5 2.7 23 24-50 8-33 (162)
170 3k6s_B Integrin beta-2; cell r 33.5 13 0.00046 34.2 1.1 14 32-49 577-590 (687)
171 2p28_B Integrin beta-2; hybrid 28.9 27 0.00094 26.8 2.1 23 20-50 97-121 (217)
172 1zjk_A Mannan-binding lectin s 28.6 1.1E+02 0.0037 25.9 6.0 44 165-208 3-52 (403)
173 3fby_A COMP, cartilage oligome 24.7 68 0.0023 28.5 3.9 34 175-208 17-54 (551)
No 1
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=100.00 E-value=4.3e-52 Score=345.78 Aligned_cols=255 Identities=36% Similarity=0.722 Sum_probs=224.1
Q ss_pred eecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCC-
Q psy8443 63 LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSK- 141 (330)
Q Consensus 63 ~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~- 141 (330)
+....|.|.||+||..|+++..|.|.|.+++|++|+|.|..|+|+... .|..|+|+|+++. ..++++||..
T Consensus 4 l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~g~~I~L~F~~f~le~~~----~C~~D~l~I~dg~----~~~~~~CG~~~ 75 (286)
T 1nt0_A 4 PEPVFGRLVSPGFPEKYGNHQDRSWTLTAPPGFRLRLYFTHFNLELSY----RCEYDFVKLTSGT----KVLATLCGQES 75 (286)
T ss_dssp -CCCEEEEECTTTTSCCCSSCCEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEEETT----EEEEEECSSSC
T ss_pred ccCCCceEeCCCCCccCcCCCcEEEEEEcCCCCEEEEEEEEEEecCCC----CCCCcEEEEECCC----eEeceECCCcC
Confidence 456789999999999999999999999999999999999999999765 7999999999984 4678999986
Q ss_pred -----CC--CcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccCCC---cccccccccCCceeeeccCCeEEc
Q psy8443 142 -----LP--PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTNNG---GCQHECRNTIGSYICSCHNGYTLL 208 (330)
Q Consensus 142 -----~~--~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~ 208 (330)
.| ..+.+.++.|++.|.++..... .||.+.|.+ +.++|...+. .|.+.|.|+.|+|.|.|.+||.|.
T Consensus 76 ~~~~~~P~~~~~~S~~n~l~v~F~Sd~s~~~~~~GF~a~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~ 155 (286)
T 1nt0_A 76 TDTERAPGNDTFYSLGPSLKVTFHSDYSNEKPFTGFEAFYAAEDVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILH 155 (286)
T ss_dssp CSSCBCCTTCEEECSSSEEEEEEECCC----CCCEEEEEEEEEECCTTC-------CCSSEEEEETTEEEEECCTTEEEC
T ss_pred CCcccCCCCceEEeCCCEEEEEEEeCCcCCcCcccEEEEEEeccCCccCCCCCCcccCCCccccccCceEeecCCCceec
Confidence 46 6889999999999999988765 999999976 6788875433 588999999999999999999999
Q ss_pred cCCCCcccCCCcce-eecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEE-EEeeCCC--CCCCCceEEEEcCCC
Q psy8443 209 ENGHDCKEGGCKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQ-EFELEPH--QTCAYDHVVMYDGDS 284 (330)
Q Consensus 209 ~~~~~C~~~~C~~~-~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~-~~~l~~~--~~C~~d~l~i~~g~~ 284 (330)
.+++.|. ..|++. ++...|.|.||+||..||++++|.|+|+++++++|+|+|. .|+||.. ..|.+|+|+||||.
T Consensus 156 ~d~~~C~-~~Cg~~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~~f~le~~~~~~C~~D~l~i~dg~- 233 (286)
T 1nt0_A 156 QNKHTCS-ALCSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQTDK- 233 (286)
T ss_dssp TTSSCEE-ECCEEEEECSSSEEEECTTTTSCCCSSCEEEEEEECCSSCEEEEEECSCCBBCCC----C--CEEEEECSS-
T ss_pred cCCCCcc-ccccCceecCCceEEeCCCCCCCCCCCCEEEEEEECCCceEEEEEEeceEEeccCCCCCCCCcEEEEEeCC-
Confidence 9999997 679887 8899999999999999999999999999999999999996 8999975 57999999999983
Q ss_pred CCccceeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 285 PDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 285 ~~~~~~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
.++++|||...|..++|++|.|+|+|+||.+..++||+|+|++
T Consensus 234 ---~~~~~~CG~~~p~~~~S~~n~l~i~F~sd~~~~~~GF~~~y~~ 276 (286)
T 1nt0_A 234 ---REYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 276 (286)
T ss_dssp ---CEEEEECBSSCCCCEECSSSEEEEEEECCSCCCCCBCEEEEEE
T ss_pred ---cceEEEcCCCCCCCEEeeCCEEEEEEEeCCCCCCCCEEEEEEE
Confidence 5789999999999999999999999999999999999999974
No 2
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.6e-51 Score=339.74 Aligned_cols=257 Identities=36% Similarity=0.739 Sum_probs=229.2
Q ss_pred CeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCC
Q psy8443 61 GILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGS 140 (330)
Q Consensus 61 ~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~ 140 (330)
..+....|.|.||+||..|+++..|.|.|.++++++|+|.|..|+|+... .|.+|+|+|+++. ..++++||.
T Consensus 3 ~~lt~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~----~C~~D~l~v~dg~----~~~~~~CG~ 74 (278)
T 3dem_A 3 VELNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSY----LCEYDYVKVETED----QVLATFCGR 74 (278)
T ss_dssp ----CCEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEECSS----CEEEEECSB
T ss_pred ceeccCCceEeCCCCCCCCcCCCcEEEEEEECCCCEEEEEEEEEEeCCCC----CCCCcEEEEecCC----cccceEcCC
Confidence 34567889999999999999999999999999999999999999999865 7999999999974 357899997
Q ss_pred CCC--------CcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccCC---CcccccccccCCceeeeccCCeE
Q psy8443 141 KLP--------PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTNN---GGCQHECRNTIGSYICSCHNGYT 206 (330)
Q Consensus 141 ~~~--------~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~~---~~C~~~C~n~~gsy~C~C~~G~~ 206 (330)
..+ ..+.|.++.|++.|.++..... .||.+.|.+ +.++|.... ..|.+.|.|..|++.|.|++||.
T Consensus 75 ~~~~~~~~~~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~ 154 (278)
T 3dem_A 75 ETTDTEQTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYI 154 (278)
T ss_dssp SSSSSSCCCTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECCTTTC-----CCCSSEEEEETTEEEEECCTTCE
T ss_pred cCCCcccCCCCccEEecCCeEEEEEecCcccccccceeEEEEEEeccccCCCCCCCcccCCcCcCCccCCcEEEeCCcce
Confidence 643 5789999999999999987764 799999975 788887653 37888899999999999999999
Q ss_pred EccCCCCcccCCCcce-eecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEE-EeeCCC--CCCCCceEEEEcC
Q psy8443 207 LLENGHDCKEGGCKYE-ITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPH--QTCAYDHVVMYDG 282 (330)
Q Consensus 207 l~~~~~~C~~~~C~~~-~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~-~~l~~~--~~C~~d~l~i~~g 282 (330)
++.+.+.|. ..|++. ++...|.|.||+||..||++.+|.|+|+++++++|.|+|.+ |+||.. ..|.+|+|+||||
T Consensus 155 l~~d~~~C~-~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~i~~~~g~~i~l~f~~~f~le~~~~~~C~~D~l~i~dg 233 (278)
T 3dem_A 155 LHTDNRTCR-VECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVG 233 (278)
T ss_dssp ECTTSSCEE-CCCCCCCBCSSEEEEESTTTTSCCCSSCEEEEEEECCTTCCEEEEECSCCBBCCCSSSSSSSCEEEEEET
T ss_pred eccCCCCCc-ccCCCceecCCccceeCCCCCCCCCCcCeEEEEEEeCCCcEEEEEEccccccccCCCCCCCCCEEEEecC
Confidence 999999998 678764 58899999999999999999999999999999999999997 999974 4799999999998
Q ss_pred CCCCccceeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 283 DSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 283 ~~~~~~~~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
. .++++|||...|..++|++|.|+|+|+||.+..++||+|+|+|
T Consensus 234 ~----~~~~~~CG~~~p~~~~s~~~~l~v~F~sd~~~~~~GF~~~y~~ 277 (278)
T 3dem_A 234 P----KVLGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRA 277 (278)
T ss_dssp T----EEEEEECBSSCCCCEECSCSEEEEEEECCSSCCCCBCEEEEEE
T ss_pred C----cccccccCCCCCCCEEEcCCEEEEEEEECCCCCcCCEEEEEEE
Confidence 4 4689999999999999999999999999999999999999986
No 3
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=100.00 E-value=2.1e-47 Score=328.78 Aligned_cols=260 Identities=34% Similarity=0.668 Sum_probs=227.8
Q ss_pred eecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCC
Q psy8443 63 LKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKL 142 (330)
Q Consensus 63 ~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~ 142 (330)
++...|.|.||+||..|++++.|.|.|++++|++|+|.|..|+||... .|.+|+|+|+++........++.+....
T Consensus 5 lt~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~l~F~~f~lE~~~----~C~~D~l~i~dg~~~~~~~cG~~~~~~~ 80 (361)
T 4aqb_A 5 LNNMFGQIQSPGYPDSYPSDSEVTWNITVPDGFRIKLYFMHFNLESSY----LCEYDYVKVETEDQVLATFCGRETTDTE 80 (361)
T ss_dssp EESSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEECSSCEEEEECSBSSSSSS
T ss_pred EeCCeEEEeCCCCCCCCCCCCeEEEEEEECCCCEEEEEEeEEEecCCC----CCCceEEEEccCCcccceeeccccCCCc
Confidence 567789999999999999999999999999999999999999999865 7999999999985433333333333221
Q ss_pred ----CCcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccC---CCcccccccccCCceeeeccCCeEEccCCC
Q psy8443 143 ----PPVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTN---NGGCQHECRNTIGSYICSCHNGYTLLENGH 212 (330)
Q Consensus 143 ----~~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~---~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~ 212 (330)
+..+.|.++.|+++|++|..... .||.+.|.+ +.++|... ...|.+.|.+..|+|.|.|..||.+..+..
T Consensus 81 ~~~~~~~~~S~~n~l~v~F~SD~s~~~~~~GF~a~y~~~~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~ 160 (361)
T 4aqb_A 81 QTPGQEVVLSPGSFMSITFRSDFSNEERFTGFDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNR 160 (361)
T ss_dssp CCCTTCCEECSSSEEEEEEEECSCCCSCCCEEEEEEEEEECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTSS
T ss_pred cCCCccceeccCCEeEEEEEeCCcccccccccccceeeccccccccccccCCCCCccCCccCCCceeccCCCeEEecccc
Confidence 23589999999999999988766 499999965 66777643 456788899999999999999999999999
Q ss_pred CcccCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEE-EeeCCC--CCCCCceEEEEcCCCCCccc
Q psy8443 213 DCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQE-FELEPH--QTCAYDHVVMYDGDSPDSLT 289 (330)
Q Consensus 213 ~C~~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~-~~l~~~--~~C~~d~l~i~~g~~~~~~~ 289 (330)
.|....|+..++..+|.|.||+||..||++.+|.|+|+++++++|.|+|.+ |+++.. ..|.+|+|+|+||. .+
T Consensus 161 ~~~~~~c~~~~~~~~G~i~SP~yP~~Yp~~~~C~w~i~~~~g~~i~l~f~~~~~~e~~~~~~C~~D~l~i~dg~----~~ 236 (361)
T 4aqb_A 161 TCRVECSDNLFTQRTGVITSPDFPNPYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGP----KV 236 (361)
T ss_dssp CEECCCCCCCBCSSEEEEESTTTTSCCCSSCEEEEEEECCTTCEEEEEECSCCBBCCCSSSSSSSSEEEEEETT----EE
T ss_pred ccccccccceEeCCCcEEecCCCCCCCCCCceeeEEeeeccCcEEEEEEeecccccCCccCccCCCeEEEeeCC----ee
Confidence 999999999999999999999999999999999999999999999999987 677663 46999999999984 57
Q ss_pred eeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 290 LGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 290 ~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
+++|||...|..++|++|.|+|+|+||.+..++||+|+|++
T Consensus 237 ~~~~cG~~~p~~~~s~~n~~~i~F~SD~~~~~~GF~~~y~~ 277 (361)
T 4aqb_A 237 LGPFCGEKAPEPISTQSHSVLILFHSDNSGENRGWRLSYRA 277 (361)
T ss_dssp EEEECBSSCCCCEECSCSEEEEEEECCSCCCCCBCEEEEEE
T ss_pred EEeeCCCCCCCCEeecCCeEEEEEEeCCCCCccceEEEEEE
Confidence 89999999999999999999999999999999999999975
No 4
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=100.00 E-value=4.5e-45 Score=330.01 Aligned_cols=231 Identities=37% Similarity=0.681 Sum_probs=210.7
Q ss_pred cCCCCeeec-CCceEeCCCCCCCCCCCCCcEEEEEcCCC-CEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCccc
Q psy8443 57 DACGGILKH-SNGTLTSPSFPDLYIKNKTCIWEIVAPPQ-YRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKS 133 (330)
Q Consensus 57 ~~C~~~~~~-~~g~~~sp~~p~~~~~~~~C~~~i~~~~g-~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~ 133 (330)
+.||+.+.. ..|.|.||+||..|+++..|.|.|++|.+ .+|.|.|. .|+++.. .|.+|+|+|++|.......
T Consensus 7 ~~CGg~l~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~~~~~I~L~F~~~f~le~~-----~C~~Dyl~I~dG~~~~~~~ 81 (577)
T 4gz9_A 7 DKCGGTIKIENPGYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDLEDR-----DCKYDYVEVIDGENEGGRL 81 (577)
T ss_dssp CCSSEEEECSSCEEEECTTTTTCCCSSCEEEEEEECSSTTCCEEEEECSCCBCCCG-----GGTSSEEEEEESSSTTSEE
T ss_pred CCCCCEEEcCCCEEEeCCCCCCCCCCCCeEEEEEEECCCCcEEEEEEEeeeeecCC-----CCCccEEEEEeCCCCCCcE
Confidence 569998864 56999999999999999999999999866 68999996 7898854 6999999999998888888
Q ss_pred ccccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCC
Q psy8443 134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHD 213 (330)
Q Consensus 134 ~~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~ 213 (330)
++++||...|..+.|.++.|+++|.++.....+||.+.|.....
T Consensus 82 lg~~CG~~~p~~i~S~~n~l~v~F~SD~s~~~~GF~a~y~~~~~------------------------------------ 125 (577)
T 4gz9_A 82 WGKFCGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKR------------------------------------ 125 (577)
T ss_dssp EEEECSSSCCCCEECSSSEEEEEEECCSSCCCCBCEEEEEECCC------------------------------------
T ss_pred EEEecCCCCCCCEEEeCCeEEEEEEECCCCCCCCeEEEEEEeec------------------------------------
Confidence 99999999999999999999999999999999999999865211
Q ss_pred cccCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCC------CCCCceEEEEcCCCCCc
Q psy8443 214 CKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQ------TCAYDHVVMYDGDSPDS 287 (330)
Q Consensus 214 C~~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~------~C~~d~l~i~~g~~~~~ 287 (330)
...|+..++...|.|.||+||..||++++|.|+|.++++++|.|+|.+|+||... .|.+|||+||||....+
T Consensus 126 --~~~C~~~~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~g~~I~L~F~~F~lE~~~~~~~~~~C~~D~l~I~dG~~~~~ 203 (577)
T 4gz9_A 126 --GPECSQNYTAPTGVIKSPGFPEKYPNSLECTYIIFAPKMSEIILEFESFDLEQDSNPPGGMFCRYDRLEIWDGFPEVG 203 (577)
T ss_dssp --CCEEEEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCCCSCSTTCCCCSSEEEEESSSTTTS
T ss_pred --CcccceeecCCCccccCCCCCCCCCCCceEEEEEEECCCCEEEEEEEEEEeeecCCCCCCCccCccEEEEEcCCCCCC
Confidence 1347788899999999999999999999999999999999999999999999754 39999999999998889
Q ss_pred cceeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 288 LTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 288 ~~~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
++|++|||...|..++|++|.|+|+|+||.+..++||+|.|++
T Consensus 204 ~~lg~~CG~~~P~~i~S~~n~l~i~F~SD~s~~~~GF~a~y~~ 246 (577)
T 4gz9_A 204 PHIGRYCGQKTPGRIRSSSGVLSMVFYTDSAIAKEGFSANYSV 246 (577)
T ss_dssp CEEEEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred ceeEEEeCCCCCCCcceeCCEEEEEEEECCCCCCceEEEEEEE
Confidence 9999999999999999999999999999999999999999985
No 5
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=100.00 E-value=4.2e-43 Score=310.90 Aligned_cols=231 Identities=32% Similarity=0.582 Sum_probs=215.8
Q ss_pred cCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccc
Q psy8443 57 DACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGV 136 (330)
Q Consensus 57 ~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~ 136 (330)
..|++.+....|.|.||+||..|+++..|.|.|.++++.+|.|.|..|+|+... ..|..|+++|+++.......+++
T Consensus 115 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~~f~le~~~---~~C~~D~l~i~dg~~~~s~~~~~ 191 (457)
T 3kq4_B 115 TACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITVRTGQLIAVHFTNFSLEEAI---GNYYTDFLEIRDGGYEKSPLLGI 191 (457)
T ss_dssp SCEEEEECSSCCCEECTTTTSCCCSSCEEEEEECCCSSCCCEEEEEEEECCCCB---TTBCSSEEEEESSSSTTSCEEEE
T ss_pred ccccceeecCcEEECCCCCCCcCCCCceEEEEEEeCCCCEEEEEEEEEEeecCC---CCcccceEEEecCCCCCcceeee
Confidence 469999999999999999999999999999999999999999999999998753 27889999999998887888999
Q ss_pred cCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 137 FCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 137 ~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
+||...|..+.+.++.+++.|+++.....+||.+.|... .
T Consensus 192 ~cG~~~p~~~~S~~n~l~v~F~sd~~~~~~GF~~~y~~~----------------------------------------~ 231 (457)
T 3kq4_B 192 FYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGS----------------------------------------S 231 (457)
T ss_dssp ECSSSCCCCEECSSSCEEEEEECCSSCCCCEEEEEEECC----------------------------------------C
T ss_pred ecCCCCCCCeEEcCCEEEEEEEeCCCCCcCCEEEEeccc----------------------------------------c
Confidence 999999999999999999999999999999999998642 1
Q ss_pred CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443 217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI 296 (330)
Q Consensus 217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~ 296 (330)
..|++.++.+.|.|.||+||..||++++|.|+|.++++++|+|+|.+|+||....|.+|+|+||||....+.+|+++||.
T Consensus 232 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~~~~i~l~f~~f~le~~~~C~~D~l~i~dg~~~~~~~l~~~CG~ 311 (457)
T 3kq4_B 232 TGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGD 311 (457)
T ss_dssp CCCEECCCSSEEEEECTTTTSCCCSSCEEEEEECCSTTCCEEEEEEECCCCCCTTCCSSEEEEEESSSTTSEEEEEECSS
T ss_pred CCCCCeEccCcceeccCCCCCCCCCCCEEEEEEEeCCCCEEEEEEEeeeecCCCCcCCCEEEEEeCCCCCchhhhhhcCC
Confidence 45777888899999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
..|..++|++|.|+|+|++|.+..++||+|+|++
T Consensus 312 ~~p~~i~S~~n~l~v~f~sd~~~~~~GF~a~y~~ 345 (457)
T 3kq4_B 312 EKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQ 345 (457)
T ss_dssp CCCCCEECSSSCEEEEEECCSSCCCCCCEEEEEE
T ss_pred cCCCCEEecCCEEEEEEEeCCcccCCeEEEEEEe
Confidence 9999999999999999999999999999999974
No 6
>3kq4_B Cubilin; protein-protein complex, cobalt, cobalt transport, disease M disulfide bond, glycoprotein, secreted, transport, choleste metabolism; HET: NAG BMA MAN B12; 3.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-43 Score=309.30 Aligned_cols=222 Identities=30% Similarity=0.640 Sum_probs=205.8
Q ss_pred cCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccc
Q psy8443 57 DACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGV 136 (330)
Q Consensus 57 ~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~ 136 (330)
..|++.+....|.|.||+||..|+++..|.|.|.++++++|.|.|..|+++... .|..|+++|+++.......+++
T Consensus 232 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~~~~i~l~f~~f~le~~~----~C~~D~l~i~dg~~~~~~~l~~ 307 (457)
T 3kq4_B 232 TGCGGNLTTSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHP----NCTLDYLAVYDGPSSNSHLLTQ 307 (457)
T ss_dssp CCCEECCCSSEEEEECTTTTSCCCSSCEEEEEECCSTTCCEEEEEEECCCCCCT----TCCSSEEEEEESSSTTSEEEEE
T ss_pred CCCCCeEccCcceeccCCCCCCCCCCCEEEEEEEeCCCCEEEEEEEeeeecCCC----CcCCCEEEEEeCCCCCchhhhh
Confidence 569888888999999999999999999999999999999999999999998865 7999999999999888888999
Q ss_pred cCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 137 FCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 137 ~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
+||...|..+.|.++.++++|.++.....+||.+.|..
T Consensus 308 ~CG~~~p~~i~S~~n~l~v~f~sd~~~~~~GF~a~y~~------------------------------------------ 345 (457)
T 3kq4_B 308 LCGDEKPPLIRSSGDSMFIKLRTDEGQQGRGFKAEYRQ------------------------------------------ 345 (457)
T ss_dssp ECSSCCCCCEECSSSCEEEEEECCSSCCCCCCEEEEEE------------------------------------------
T ss_pred hcCCcCCCCEEecCCEEEEEEEeCCcccCCeEEEEEEe------------------------------------------
Confidence 99999999999999999999999999999999999863
Q ss_pred CCCcceee--cCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeecc
Q psy8443 217 GGCKYEIT--APNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFC 294 (330)
Q Consensus 217 ~~C~~~~~--~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~c 294 (330)
.|++.+. ...|.|.||+||..||++.+|.|+|+++++++|+|+|..|+||....|.+|||+||||... +++||
T Consensus 346 -~C~~~~~~~~~~G~i~Sp~yP~~Yp~~~~C~w~i~~~~g~~i~l~f~~f~le~~~~C~~D~l~i~dg~~~----~~~~C 420 (457)
T 3kq4_B 346 -TCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQ----MGRYC 420 (457)
T ss_dssp -CCTTEEECSCSSEEEECTTTTSCCCSSCEEEEEEECSTTCCCEEEEEEEECCCCTTTTSSEEEEEETTEE----EEEEC
T ss_pred -ecCCcccccceeeEEecCCCCccCCCCCceEEEEEcCCCCEEEEEEeEEEEccCCCCCceEEEEEeCCcc----ceeec
Confidence 1344443 4579999999999999999999999999999999999999999999999999999998754 89999
Q ss_pred CCCCCCcEEecCCEEEEEEEeCCC-CCCCCeEEEEe
Q psy8443 295 GIKLPYPIITGSNQLYMMFKSDAS-VQRKGFIATHT 329 (330)
Q Consensus 295 g~~~~~~~~s~~~~~~v~f~s~~~-~~~~GF~~~y~ 329 (330)
|...|..++|+++.|+|+|+||.+ .+++||+|+|+
T Consensus 421 G~~~p~~~~s~~~~l~v~F~sd~~~~~~~GF~~~y~ 456 (457)
T 3kq4_B 421 GVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWF 456 (457)
T ss_dssp TTCCCCCEECSSSEEEEEEECCSCCSCCCEEEEEEC
T ss_pred CCCCCCCEEeeCCEEEEEEEECCCCccCCCEEEEEE
Confidence 999999999999999999999998 99999999996
No 7
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=100.00 E-value=6.1e-42 Score=311.39 Aligned_cols=232 Identities=34% Similarity=0.668 Sum_probs=202.7
Q ss_pred cCCCCeeec-CCceEeCCCCCCCCCCCCCcEEEEEcCC-CCEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCccc
Q psy8443 57 DACGGILKH-SNGTLTSPSFPDLYIKNKTCIWEIVAPP-QYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKS 133 (330)
Q Consensus 57 ~~C~~~~~~-~~g~~~sp~~p~~~~~~~~C~~~i~~~~-g~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~ 133 (330)
..|++.+.. ..|.|.||+||..|+++..|.|.|.++. +.+|.|.|. .|+++.. .|.+|+|+|+++.......
T Consensus 4 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~~~~~I~l~F~~~f~le~~-----~C~~D~l~i~dg~~~~~~~ 78 (579)
T 2qqk_A 4 PPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEKH-----DCKYDFIEIRDGDSESADL 78 (579)
T ss_dssp -CCCEEEETTSCEEEECTTTTSCCCSSCCEEEEEECSSTTSEEEEEECSCCBCCCT-----TSSSSEEEEEESSSTTSEE
T ss_pred CCCCCEEEeCCCeEEeCCCCCCCCcCCCEEEEEEEECCCCcEEEEEEecccccccC-----CCCeeEEEEEeCCCCCcce
Confidence 569998875 6899999999999999999999999995 579999999 8999863 6999999999998877788
Q ss_pred ccccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecccCccccCCCcccccccccCCceeeeccCCeEEccCCCC
Q psy8443 134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHD 213 (330)
Q Consensus 134 ~~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~ 213 (330)
++++||...|..+.|.++.+++.|.++.....+||.+.|.....
T Consensus 79 l~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~~~------------------------------------ 122 (579)
T 2qqk_A 79 LGKHCGNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYEIFKT------------------------------------ 122 (579)
T ss_dssp EEEECTTSCCCCEECSSSEEEEEEECC---CCCBCEEEEEEECC------------------------------------
T ss_pred eeeECCCCCCCCEEecCCEEEEEEEECCCCCCCceEEEEEEccc------------------------------------
Confidence 99999999999999999999999999999999999999975310
Q ss_pred cccCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCC------CCCCCceEEEEcCCCCCc
Q psy8443 214 CKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH------QTCAYDHVVMYDGDSPDS 287 (330)
Q Consensus 214 C~~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~------~~C~~d~l~i~~g~~~~~ 287 (330)
....|++.++..+|.|.||+||..||++.+|.|+|.++++++|.|.|..|+||.. ..|.+|+|+||||....+
T Consensus 123 -~~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~F~~f~le~~~~~~~~~~C~~D~l~I~dg~~~~~ 201 (579)
T 2qqk_A 123 -GSEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVG 201 (579)
T ss_dssp -CCCCCCCEECCSEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEEC-------------CCEEEEESSSTTTS
T ss_pred -ccccccceeccCCceecCCCCcccCCCCCeEEEEEEcCCCCEEEEEEEEEEeecccccccCCCCCCEEEEEEeCCCCCC
Confidence 0134788899999999999999999999999999999999999999999999974 579999999999998888
Q ss_pred cceeeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 288 LTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 288 ~~~~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
+++++|||...|..++|++|.|+|+|+||.+..++||+|.|++
T Consensus 202 ~~~~~~CG~~~p~~i~S~~n~l~i~F~sd~~~~~~GF~~~y~~ 244 (579)
T 2qqk_A 202 PLIGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYL 244 (579)
T ss_dssp CEEEEECSSSCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred ceeEEeCCCCCCCcEEeeCCeEEEEEeccccccccceEEEEEE
Confidence 9999999999999999999999999999999999999999973
No 8
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=193.44 Aligned_cols=114 Identities=35% Similarity=0.624 Sum_probs=109.0
Q ss_pred CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443 217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI 296 (330)
Q Consensus 217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~ 296 (330)
..|++.++...|.|.||+||..||++++|.|+|+++++++|+|+|.+|+||....|.+|+|+||||....++++++|||.
T Consensus 5 ~~Cgg~l~~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~L~F~~f~le~~~~C~~D~l~I~dg~~~~~~~~~~~CG~ 84 (149)
T 2wno_A 5 KECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDPGCLADYVEIYDSYDDVHGFVGRYCGD 84 (149)
T ss_dssp SCCCEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCEEEEEEEEEECCCCTTCCSSEEEEESSSSSSSSEEEEECSS
T ss_pred CCCCCEEECCceEEECCCCCcCCCCCCEEEEEEEECCCCEEEEEEEEEEecCCCCCCCCEEEEecCCCCCcceeeeEcCC
Confidence 56899999999999999999999999999999999999999999999999998899999999999998888899999999
Q ss_pred CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
..|..++|++|.|+|+|+||.+..++||+|+|++
T Consensus 85 ~~p~~~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~ 118 (149)
T 2wno_A 85 ELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVA 118 (149)
T ss_dssp SCCCCEECSSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred CCCCCEEEeCCEEEEEEEECCCCCCCCEEEEEEE
Confidence 9999999999999999999999999999999974
No 9
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=99.96 E-value=2.2e-29 Score=179.93 Aligned_cols=110 Identities=32% Similarity=0.646 Sum_probs=101.2
Q ss_pred CCCccee-ecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEE-EEeeCCC--CCCCCceEEEEcCCCCCccceee
Q psy8443 217 GGCKYEI-TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQ-EFELEPH--QTCAYDHVVMYDGDSPDSLTLGR 292 (330)
Q Consensus 217 ~~C~~~~-~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~-~~~l~~~--~~C~~d~l~i~~g~~~~~~~~~~ 292 (330)
+.|++.+ +...|.|.||+||..||++.+|.|+|+++++++|+|+|. .|+||.. ..|.+|+|+|+||. .++++
T Consensus 2 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~d~f~le~~~~~~C~~D~l~i~dg~----~~~~~ 77 (115)
T 3poj_A 2 VECSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHPEVPCPYDYIKIKAGS----KVWGP 77 (115)
T ss_dssp -CEEEEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCCCEEEECSCCBBCCCSSSSSCSCEEEEEETT----EEEEE
T ss_pred eECCCceEcCCCEEEcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEecceecccCCCCCCCCeEEEEEcCC----ccccc
Confidence 4577774 789999999999999999999999999999999999999 5999975 38999999999984 57899
Q ss_pred ccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 293 FCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 293 ~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
+||...|..++|++|.|+|+|+||.+..++||+|+|+|
T Consensus 78 ~CG~~~p~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~a 115 (115)
T 3poj_A 78 FCGEKSPEPISTQSHSIQILFRSDNSGENRGWRLSYRA 115 (115)
T ss_dssp ECBSSCCCCEECCCSEEEEEEECCSSCCCCBCEEEEEC
T ss_pred CcCCCCCCCEEecCCEEEEEEEcCCCCCCCCEEEEEEC
Confidence 99999999999999999999999999999999999987
No 10
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.95 E-value=1.1e-27 Score=183.21 Aligned_cols=147 Identities=41% Similarity=0.826 Sum_probs=132.9
Q ss_pred eeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCC
Q psy8443 62 ILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSK 141 (330)
Q Consensus 62 ~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~ 141 (330)
.+....|.|.||+||..|+++..|.|.|.++++++|+|.|..|+|+... .|.+|+|.|+++. ..++++||..
T Consensus 7 ~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~----~C~~D~l~i~dg~----~~~~~~CG~~ 78 (170)
T 1szb_A 7 WPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSH----LCEYDFVKLSSGA----KVLATLCGQE 78 (170)
T ss_dssp CCCCCEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCT----TSCSSEEEEESSS----SEEEEECSBT
T ss_pred eEcCCCeEEECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEEEEccCCC----CCCCCEEEEEeCC----ccccccCCCC
Confidence 4567889999999999999999999999999999999999999999765 8999999999984 4678999987
Q ss_pred ------CC--CcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccCCCc---ccccccccCCceeeeccCCeEE
Q psy8443 142 ------LP--PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTNNGG---CQHECRNTIGSYICSCHNGYTL 207 (330)
Q Consensus 142 ------~~--~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~~~~---C~~~C~n~~gsy~C~C~~G~~l 207 (330)
.| ..+.|.++.|++.|.++..... .||.+.|+. +++||...++. |.+.|.|+.|+|.|.|++||.|
T Consensus 79 ~~~~~~~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l 158 (170)
T 1szb_A 79 STDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVL 158 (170)
T ss_dssp TTTCSSSCTTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEE
T ss_pred CCccccCCCCceEEeeCCeEEEEEeccccccCcCcCceeeeeccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEE
Confidence 46 6899999999999999998876 999999964 89999987755 9999999999999999999999
Q ss_pred ccCCCCccc
Q psy8443 208 LENGHDCKE 216 (330)
Q Consensus 208 ~~~~~~C~~ 216 (330)
+.++++|.+
T Consensus 159 ~~d~~~C~~ 167 (170)
T 1szb_A 159 HRNKRTCSE 167 (170)
T ss_dssp CTTSSCEEE
T ss_pred CCCCCcccc
Confidence 999999964
No 11
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.95 E-value=4.4e-27 Score=178.26 Aligned_cols=145 Identities=34% Similarity=0.684 Sum_probs=126.8
Q ss_pred ecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCC
Q psy8443 64 KHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLP 143 (330)
Q Consensus 64 ~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~ 143 (330)
....|.|.||+||..|+++..|.|.|.+++|++|+|.|..|+|+... .|.+|+|+|+++. ..++++||...+
T Consensus 2 ~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~----~C~~D~l~i~dg~----~~~~~~CG~~~~ 73 (159)
T 1nzi_A 2 PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSE----NCAYDSVQIISGD----TEEGRLCGQRSS 73 (159)
T ss_dssp CCSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCG----GGCSSEEEEEC-------CCEEECSEECC
T ss_pred CCCCEEEECCCCccCCCCCCCEEEEEEeCCCCEEEEEEeEEEecCCC----CCCCCEEEEEeCC----chhcccCCCCCC
Confidence 34679999999999999999999999999999999999999998764 7999999999985 367899998764
Q ss_pred --------CcEEccCCeEEEEEEeCCCCcc--cCceEEEec-ccCccccC-CCcccccccccCCceeeeccCCeEEccCC
Q psy8443 144 --------PVILSEGNALRIEFHSDNSVQK--SGFSAFFFT-DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENG 211 (330)
Q Consensus 144 --------~~~~s~~~~~~~~f~~~~~~~~--~Gf~~~~~~-~~~eC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~~~ 211 (330)
..+.+.++.|++.|.++..... +||.+.|.. +++||... ...|.+.|.|+.|+|.|.|++||.|..++
T Consensus 74 ~~~~~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~ 153 (159)
T 1nzi_A 74 NNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDM 153 (159)
T ss_dssp CCSSCCCSEEEEESSSEEEEEEEECSCCTTCCCEEEEEEEEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTS
T ss_pred CcccCCcceeEEecCCeEEEEEEecCccCcccccceeeeecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCC
Confidence 3689999999999999988765 899999964 88999875 45788899999999999999999999999
Q ss_pred CCccc
Q psy8443 212 HDCKE 216 (330)
Q Consensus 212 ~~C~~ 216 (330)
+.|.+
T Consensus 154 ~~C~~ 158 (159)
T 1nzi_A 154 KNCGV 158 (159)
T ss_dssp SCEEC
T ss_pred Ccccc
Confidence 99964
No 12
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.94 E-value=1.8e-26 Score=164.53 Aligned_cols=103 Identities=17% Similarity=0.399 Sum_probs=96.1
Q ss_pred CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443 217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI 296 (330)
Q Consensus 217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~ 296 (330)
..|++.++..+|.|.|| ||++.+|.|+|+++++++|.|+|.+|+| .|.+|+|+||||... ++++++|||.
T Consensus 7 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l----~C~~D~l~i~dg~~~-~~~~~~~CG~ 76 (116)
T 1spp_B 7 DECGRVIKDTSGSISNT-----DRQKNLCTWTILMKPDQKVRMAIPYLNL----ACGKEYVEVFDGLLS-GPSYGKLCAG 76 (116)
T ss_dssp GGTTEEECCSEEEEECC-----SSCCSEEEEEEECCTTCEEEEEEEEEEC----CBTTEEEEEESSSTT-SCEEEEESEE
T ss_pred CCCCCEEeCCceEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeCcc----cCCCCEEEEEcCCCC-CcccccccCc
Confidence 56899999999999998 8899999999999999999999999999 488999999999876 7889999999
Q ss_pred CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
. |..++|++|.|+|+|+||.+..++||+|.|++
T Consensus 77 ~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~ 109 (116)
T 1spp_B 77 A-AIVFLSTANTMTIKYNRISGNSSSPFLIYFYG 109 (116)
T ss_dssp E-EEEEECSSSEEEEEEEESSCSCCCCCEEEEEE
T ss_pred C-CCCEEecCCEEEEEEEECCCCCCCCEEEEEEE
Confidence 8 78899999999999999999999999999974
No 13
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.94 E-value=1.8e-26 Score=162.42 Aligned_cols=102 Identities=23% Similarity=0.390 Sum_probs=94.4
Q ss_pred CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCC
Q psy8443 217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGI 296 (330)
Q Consensus 217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~ 296 (330)
..|++.++..+|.|.|| ||++.+|.|+|+++++++|.|+|.+|++ .|.+|+|+||||... ++++++|||.
T Consensus 4 ~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l----~C~~D~l~I~dg~~~-~~~~~~~CG~ 73 (109)
T 1spp_A 4 HACGGRLTDDYGTIFTY-----KGPKTECVWTLQVDPKYKLLVSIPTLNL----TCGKEYVEVLEGAPG-SKSLGKFCEG 73 (109)
T ss_dssp CSSCEEEECSEEEEECC-----CSSCSEEEEEEECCTTSEEEEEEEEEEC----CTTTEEEEEESSSTT-SCEEEEESEE
T ss_pred cCCCCEEeCCcEEEeCC-----CCCCCcEEEEEEcCCCCEEEEEEeeeec----cCCCCEEEEEeCCCC-CchhhhhhCC
Confidence 56899999999999997 8899999999999999999999999998 488999999999865 7889999999
Q ss_pred CCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 297 KLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 297 ~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
. |..++| +|.|+|+|+||.+..++||+|+|++
T Consensus 74 ~-p~~~~S-~n~l~v~F~Sd~~~~~~GF~~~y~~ 105 (109)
T 1spp_A 74 L-SILNRG-SSGMTVKYKRDSGHPASPYEIIFLR 105 (109)
T ss_dssp E-EEEEEE-CTTCEEEEEECTTCCCCCCEEEEEE
T ss_pred C-CCCEEE-CCEEEEEEEeCCCCCCCCEEEEEEE
Confidence 6 678899 9999999999999999999999974
No 14
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.94 E-value=1.9e-26 Score=174.80 Aligned_cols=103 Identities=35% Similarity=0.587 Sum_probs=92.3
Q ss_pred ecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCCCC----
Q psy8443 224 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIKLP---- 299 (330)
Q Consensus 224 ~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~~~---- 299 (330)
+...|.|.||+||..||++++|.|+|+++++++|+|+|.+|+||....|.+|+|+||||. .++++|||...+
T Consensus 2 ~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~~D~l~i~dg~----~~~~~~CG~~~~~~~~ 77 (159)
T 1nzi_A 2 PTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGD----TEEGRLCGQRSSNNPH 77 (159)
T ss_dssp CCSEEEEECTTTTSCCCSSEEEEEEEECCTTEEEEEEEEEEECCCCGGGCSSEEEEEC-------CCEEECSEECCCCSS
T ss_pred CCCCEEEECCCCccCCCCCCCEEEEEEeCCCCEEEEEEeEEEecCCCCCCCCEEEEEeCC----chhcccCCCCCCCccc
Confidence 567899999999999999999999999999999999999999999888999999999986 478899998764
Q ss_pred ----CcEEecCCEEEEEEEeCCCCCC--CCeEEEEeC
Q psy8443 300 ----YPIITGSNQLYMMFKSDASVQR--KGFIATHTT 330 (330)
Q Consensus 300 ----~~~~s~~~~~~v~f~s~~~~~~--~GF~~~y~~ 330 (330)
..++|++|.|+|+|+||.+..+ +||+|.|++
T Consensus 78 ~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~GF~~~y~~ 114 (159)
T 1nzi_A 78 SPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA 114 (159)
T ss_dssp CCCSEEEEESSSEEEEEEEECSCCTTCCCEEEEEEEE
T ss_pred CCcceeEEecCCeEEEEEEecCccCcccccceeeeec
Confidence 3689999999999999988775 999999963
No 15
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=99.94 E-value=3.1e-25 Score=190.68 Aligned_cols=198 Identities=31% Similarity=0.666 Sum_probs=166.2
Q ss_pred ceeeeeEeeccccCC---CCCCeeeEEeecceEEEecCCCcEEcCCCCccccccccccCCCCeeecCCceEeCCCCCCCC
Q psy8443 3 KLRIRWFKFDECALE---DHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLY 79 (330)
Q Consensus 3 ~~~~~C~dideC~~~---~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~~~~C~~~~~~~~g~~~sp~~p~~~ 79 (330)
+..++-.+.++|... ...|.+.|.|..|+|.|.|..||.+..+...|. ...|++.+....|.|.||+||..|
T Consensus 113 ~a~y~~~~~~~c~~~~~~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~-----~~~c~~~~~~~~G~i~SP~yP~~Y 187 (361)
T 4aqb_A 113 DAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR-----VECSDNLFTQRTGVITSPDFPNPY 187 (361)
T ss_dssp EEEEEEEECCGGGTGGGSSSCCSSEEEEETTEEEEECCTTCEECTTSSCEE-----CCCCCCCBCSSEEEEESTTTTSCC
T ss_pred ccceeeccccccccccccCCCCCccCCccCCCceeccCCCeEEeccccccc-----cccccceEeCCCcEEecCCCCCCC
Confidence 455667788888643 236888999999999999999999999988883 455677788999999999999999
Q ss_pred CCCCCcEEEEEcCCCCEEEEEEeE-EEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCCCcEEccCCeEEEEEE
Q psy8443 80 IKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFH 158 (330)
Q Consensus 80 ~~~~~C~~~i~~~~g~~~~l~~~~-~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~~~~s~~~~~~~~f~ 158 (330)
+.+..|.|.|.+++|++|.|.|.. |+++... ...|.+|+++|+++. ..++++||...|..+.+.++.+++.|+
T Consensus 188 p~~~~C~w~i~~~~g~~i~l~f~~~~~~e~~~--~~~C~~D~l~i~dg~----~~~~~~cG~~~p~~~~s~~n~~~i~F~ 261 (361)
T 4aqb_A 188 PKSSECLYTIELEEGFMVNLQFEDIFDIEDHP--EVPCPYDYIKIKVGP----KVLGPFCGEKAPEPISTQSHSVLILFH 261 (361)
T ss_dssp CSSCEEEEEEECCTTCEEEEEECSCCBBCCCS--SSSSSSSEEEEEETT----EEEEEECBSSCCCCEECSCSEEEEEEE
T ss_pred CCCceeeEEeeeccCcEEEEEEeecccccCCc--cCccCCCeEEEeeCC----eeEEeeCCCCCCCCEeecCCeEEEEEE
Confidence 999999999999999999999986 5665432 336899999999984 467899999999999999999999999
Q ss_pred eCCCCcccCceEEEecccCccccCCCcccccccccC------CceeeeccCCeEEccCC
Q psy8443 159 SDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTI------GSYICSCHNGYTLLENG 211 (330)
Q Consensus 159 ~~~~~~~~Gf~~~~~~~~~eC~~~~~~C~~~C~n~~------gsy~C~C~~G~~l~~~~ 211 (330)
++.....+||.+.|....++|.....+..+.+.... ....+.|++||.|.++.
T Consensus 262 SD~~~~~~GF~~~y~~~~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~ 320 (361)
T 4aqb_A 262 SDNSGENRGWRLSYRAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDN 320 (361)
T ss_dssp CCSCCCCCBCEEEEEEECCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETT
T ss_pred eCCCCCccceEEEEEEccCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCC
Confidence 999999999999999888899876555555554433 33579999999997655
No 16
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=99.94 E-value=7.9e-26 Score=172.93 Aligned_cols=106 Identities=30% Similarity=0.547 Sum_probs=97.4
Q ss_pred ceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccCCC---
Q psy8443 221 YEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCGIK--- 297 (330)
Q Consensus 221 ~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg~~--- 297 (330)
..++..+|.|.||+||..||++++|.|+|+++++++|+|+|.+|+||....|.+|+|+||||. .++++|||..
T Consensus 6 ~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~C~~D~l~i~dg~----~~~~~~CG~~~~~ 81 (170)
T 1szb_A 6 KWPEPVFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGA----KVLATLCGQESTD 81 (170)
T ss_dssp CCCCCCEEEEECTTTTSCCCSSCEEEEEEECCTTEEEEEEEEEEECCCCTTSCSSEEEEESSS----SEEEEECSBTTTT
T ss_pred ceEcCCCeEEECCCCCcCCcCCCcEEEEEEcCCCCEEEEEEEEEEccCCCCCCCCEEEEEeCC----ccccccCCCCCCc
Confidence 456788999999999999999999999999999999999999999999889999999999985 4789999987
Q ss_pred ---CC--CcEEecCCEEEEEEEeCCCCCC--CCeEEEEeC
Q psy8443 298 ---LP--YPIITGSNQLYMMFKSDASVQR--KGFIATHTT 330 (330)
Q Consensus 298 ---~~--~~~~s~~~~~~v~f~s~~~~~~--~GF~~~y~~ 330 (330)
.| ..++|++|.|+|+|+||.+..+ +||+|.|++
T Consensus 82 ~~~~P~~~~~~S~~n~l~v~F~Sd~~~~~~~~Gf~~~~~~ 121 (170)
T 1szb_A 82 TERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA 121 (170)
T ss_dssp CSSSCTTCCEECSSSEEEEEEECCSCCSSCCCEEEEEEEE
T ss_pred cccCCCCceEEeeCCeEEEEEeccccccCcCcCceeeeec
Confidence 46 6899999999999999988876 999999963
No 17
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=99.94 E-value=6.4e-26 Score=161.23 Aligned_cols=104 Identities=18% Similarity=0.359 Sum_probs=96.0
Q ss_pred cCCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCCCCCCceEEEEcCCCCCccceeeccC
Q psy8443 216 EGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDSLTLGRFCG 295 (330)
Q Consensus 216 ~~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~cg 295 (330)
+..|++.++...|.|.|| ||++.+|.|+|+++++++|+|+|.+|+| .|.+|+|+||||... ++++++|||
T Consensus 7 ~~~Cgg~l~~~~G~i~Sp-----y~~~~~C~w~I~~~~g~~I~l~f~~f~l----~C~~D~l~i~dg~~~-~~~~~~~CG 76 (114)
T 1sfp_A 7 NTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQL----NCNKESLEIIDGLPG-SPVLGKICE 76 (114)
T ss_dssp ECSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEEC----CTTTEEEEEESSSTT-SCEEEEESE
T ss_pred CCCCCCeEECCcEEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeeee----ecCCCEEEEEcCCCC-CcceeEecC
Confidence 367999999999999997 7889999999999999999999999998 488999999999864 788999999
Q ss_pred CCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 296 IKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 296 ~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
.. |..++|++|.|+|+|+||.+..++||+|.|++
T Consensus 77 ~~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~ 110 (114)
T 1sfp_A 77 GS-LMDYRSSGSIMTVKYIREPEHPASFYEVLYFQ 110 (114)
T ss_dssp EE-EEEEECSSSEEEEEEEECTTSCCCCCEEEEEE
T ss_pred cC-CCCEEecCCeEEEEEEECCCCCCCCEEEEEEE
Confidence 98 77899999999999999999999999999974
No 18
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=99.93 E-value=3.4e-25 Score=183.93 Aligned_cols=161 Identities=33% Similarity=0.724 Sum_probs=138.2
Q ss_pred cceeeeeEeeccccCCCC---CCeeeEEeecceEEEecCCCcEEcCCCCccccccccccCCCCe-eecCCceEeCCCCCC
Q psy8443 2 IKLRIRWFKFDECALEDH---GCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGI-LKHSNGTLTSPSFPD 77 (330)
Q Consensus 2 ~~~~~~C~dideC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~~~~C~~~-~~~~~g~~~sp~~p~ 77 (330)
|+..++-.+.++|..... .|.+.|.|+.|+|.|.|.+||.|..++..| ...|++. +....|.|.||+||.
T Consensus 111 F~a~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C------~~~Cg~~~~~~~~G~i~SP~yP~ 184 (286)
T 1nt0_A 111 FEAFYAAEDVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQNKHTC------SALCSGQVFTGRSGFLSSPEYPQ 184 (286)
T ss_dssp EEEEEEEEECCTTC-------CCSSEEEEETTEEEEECCTTEEECTTSSCE------EECCEEEEECSSSEEEECTTTTS
T ss_pred EEEEEEeccCCccCCCCCCcccCCCccccccCceEeecCCCceeccCCCCc------cccccCceecCCceEEeCCCCCC
Confidence 345667778899975433 599999999999999999999999999999 6789987 788999999999999
Q ss_pred CCCCCCCcEEEEEcCCCCEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCCCcEEccCCeEEEE
Q psy8443 78 LYIKNKTCIWEIVAPPQYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIE 156 (330)
Q Consensus 78 ~~~~~~~C~~~i~~~~g~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~~~~s~~~~~~~~ 156 (330)
.|+++..|.|.|++++|++|.|.|. .|+|+... ...|.+|+|+|+++. ..++++||...|..+.+.++.|++.
T Consensus 185 ~Yp~~~~C~w~I~~~~g~~I~l~f~~~f~le~~~--~~~C~~D~l~i~dg~----~~~~~~CG~~~p~~~~S~~n~l~i~ 258 (286)
T 1nt0_A 185 PYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHP--EAQCPYDSLKIQTDK----REYGPFCGKTLPPRIETDSNKVTIT 258 (286)
T ss_dssp CCCSSCEEEEEEECCSSCEEEEEECSCCBBCCC------C--CEEEEECSS----CEEEEECBSSCCCCEECSSSEEEEE
T ss_pred CCCCCCEEEEEEECCCceEEEEEEeceEEeccCC--CCCCCCcEEEEEeCC----cceEEEcCCCCCCCEEeeCCEEEEE
Confidence 9999999999999999999999996 79998642 237999999999973 5688999999999999999999999
Q ss_pred EEeCCCCcccCceEEEec
Q psy8443 157 FHSDNSVQKSGFSAFFFT 174 (330)
Q Consensus 157 f~~~~~~~~~Gf~~~~~~ 174 (330)
|+++.....+||.+.|..
T Consensus 259 F~sd~~~~~~GF~~~y~~ 276 (286)
T 1nt0_A 259 FTTDESGNHTGWKIHYTS 276 (286)
T ss_dssp EECCSCCCCCBCEEEEEE
T ss_pred EEeCCCCCCCCEEEEEEE
Confidence 999999999999999975
No 19
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=99.93 E-value=5.3e-25 Score=182.42 Aligned_cols=161 Identities=35% Similarity=0.744 Sum_probs=141.8
Q ss_pred cceeeeeEeeccccCCCC---CCeeeEEeecceEEEecCCCcEEcCCCCccccccccccCCCCe-eecCCceEeCCCCCC
Q psy8443 2 IKLRIRWFKFDECALEDH---GCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGI-LKHSNGTLTSPSFPD 77 (330)
Q Consensus 2 ~~~~~~C~dideC~~~~~---~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~~~~C~~~-~~~~~g~~~sp~~p~ 77 (330)
|+..++-.++++|..... .|.+.|.|..|+|+|.|++||.+..|...| ...|++. +....|.|.||+||.
T Consensus 112 F~~~y~~~~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C------~~~Cgg~~~~~~~G~i~SP~yP~ 185 (278)
T 3dem_A 112 FDAHYMAVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRTC------RVECSDNLFTQRTGVITSPDFPN 185 (278)
T ss_dssp EEEEEEEEECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECTTSSCE------ECCCCCCCBCSSEEEEESTTTTS
T ss_pred eEEEEEEeccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceeccCCCCC------cccCCCceecCCccceeCCCCCC
Confidence 355667788999975433 799999999999999999999999999999 6789875 478899999999999
Q ss_pred CCCCCCCcEEEEEcCCCCEEEEEEeE-EEecCCCCCCCCCCCceEEEEeCCCCCcccccccCCCCCCCcEEccCCeEEEE
Q psy8443 78 LYIKNKTCIWEIVAPPQYRISLNFTH-FDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIE 156 (330)
Q Consensus 78 ~~~~~~~C~~~i~~~~g~~~~l~~~~-~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~~~c~~~~~~~~~s~~~~~~~~ 156 (330)
.|+++..|.|.|+++++++|.|.|.. |+|+... ...|.+|+|+|+++. ..++++||...|..+.+.++.|++.
T Consensus 186 ~Yp~~~~C~w~i~~~~g~~i~l~f~~~f~le~~~--~~~C~~D~l~i~dg~----~~~~~~CG~~~p~~~~s~~~~l~v~ 259 (278)
T 3dem_A 186 PYPKSSECLYTIELEEGFMVNLQFEDIFDIEDHP--EVPCPYDYIKIKVGP----KVLGPFCGEKAPEPISTQSHSVLIL 259 (278)
T ss_dssp CCCSSCEEEEEEECCTTCCEEEEECSCCBBCCCS--SSSSSSCEEEEEETT----EEEEEECBSSCCCCEECSCSEEEEE
T ss_pred CCCCcCeEEEEEEeCCCcEEEEEEccccccccCC--CCCCCCCEEEEecCC----cccccccCCCCCCCEEEcCCEEEEE
Confidence 99999999999999999999999997 9998642 237999999999984 4578999999999999999999999
Q ss_pred EEeCCCCcccCceEEEec
Q psy8443 157 FHSDNSVQKSGFSAFFFT 174 (330)
Q Consensus 157 f~~~~~~~~~Gf~~~~~~ 174 (330)
|+++.....+||.+.|.+
T Consensus 260 F~sd~~~~~~GF~~~y~~ 277 (278)
T 3dem_A 260 FHSDNSGENRGWRLSYRA 277 (278)
T ss_dssp EECCSSCCCCBCEEEEEE
T ss_pred EEECCCCCcCCEEEEEEE
Confidence 999999999999999965
No 20
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=99.93 E-value=2.6e-25 Score=196.18 Aligned_cols=114 Identities=35% Similarity=0.684 Sum_probs=108.1
Q ss_pred CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCCC------CCCCceEEEEcCCCCCccce
Q psy8443 217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQ------TCAYDHVVMYDGDSPDSLTL 290 (330)
Q Consensus 217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~~------~C~~d~l~i~~g~~~~~~~~ 290 (330)
..|++.++...|.|.||+||..||++.+|.|+|.++++++|.|.|.+|+||... .|.+|||+||||....++++
T Consensus 9 ~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~ 88 (450)
T 2qqm_A 9 PECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHI 88 (450)
T ss_dssp CTTCEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCEE
T ss_pred CCCCCeEeCCcEEEeCCCCCcCCCCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCCCcEEEEecCCCCCCccc
Confidence 578999999999999999999999999999999999999999999999999864 79999999999998889999
Q ss_pred eeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 291 GRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 291 ~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
++|||...|..++|++|.|+|+|+||.+..++||+|+|++
T Consensus 89 ~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~ 128 (450)
T 2qqm_A 89 GRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSV 128 (450)
T ss_dssp EEECTTCCCCEEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred eeecCCcCCCcEEEcCCEEEEEEEeCCccccCCeEEEEec
Confidence 9999999999999999999999999999999999999974
No 21
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=99.92 E-value=8.3e-25 Score=193.36 Aligned_cols=114 Identities=31% Similarity=0.647 Sum_probs=106.1
Q ss_pred CCCcceeecCcceeeCCCCCCCCCCCceeEEEEEeCCCCEEEEEEEEEeeCCC------CCCCCceEEEEcCCCCCccce
Q psy8443 217 GGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPH------QTCAYDHVVMYDGDSPDSLTL 290 (330)
Q Consensus 217 ~~C~~~~~~~~g~i~sp~~p~~y~~~~~C~w~i~~~~~~~i~l~f~~~~l~~~------~~C~~d~l~i~~g~~~~~~~~ 290 (330)
..|++.++...|.|.||+||..||++.+|.|+|+++++++|.|.|..|+||.. ..|.+|+|+||||....++++
T Consensus 6 ~~Cg~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~~ 85 (460)
T 2qqo_A 6 EDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPLI 85 (460)
T ss_dssp -CCCEEECSSEEEEECTTTTSCCCSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CCSSEEEEESSSTTTSCEE
T ss_pred CCCCCEEeCCceEEeCCCCCCCCCCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCCCCEEEEEcCCCCCCccc
Confidence 45899999999999999999999999999999999999999999999999985 479999999999988888999
Q ss_pred eeccCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 291 GRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 291 ~~~cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
++|||...|..++|++|.|+|+|+||.+..++||+|.|++
T Consensus 86 ~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~ 125 (460)
T 2qqo_A 86 GKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYL 125 (460)
T ss_dssp EEECTTCCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEE
T ss_pred ceEeCCcCCcCEEeeCCEEEEEEeccceeecCcEEEEEEE
Confidence 9999999999999999999999999999999999999974
No 22
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=99.90 E-value=8.3e-24 Score=191.35 Aligned_cols=113 Identities=28% Similarity=0.601 Sum_probs=104.1
Q ss_pred CCCcceeecC-cceeeCCCCCCCCCCCceeEEEEEeCCC-CEEEEEEE-EEeeCCCCCCCCceEEEEcCCCCCccceeec
Q psy8443 217 GGCKYEITAP-NGVIKTPNHPDYYPSKRECIWHFTTTPG-HRIKLVFQ-EFELEPHQTCAYDHVVMYDGDSPDSLTLGRF 293 (330)
Q Consensus 217 ~~C~~~~~~~-~g~i~sp~~p~~y~~~~~C~w~i~~~~~-~~i~l~f~-~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~ 293 (330)
..|++.++.. .|.|+||+||..||++++|.|+|++|.+ .+|.|+|. .|+||. .+|.+|||+||||....++++++|
T Consensus 7 ~~CGg~l~~~~~G~i~SPnyP~~Yp~n~~C~W~I~~p~~~~~I~L~F~~~f~le~-~~C~~Dyl~I~dG~~~~~~~lg~~ 85 (577)
T 4gz9_A 7 DKCGGTIKIENPGYLTSPGYPHSYHPSEKCEWLIQAPEPYQRIMINFNPHFDLED-RDCKYDYVEVIDGENEGGRLWGKF 85 (577)
T ss_dssp CCSSEEEECSSCEEEECTTTTTCCCSSCEEEEEEECSSTTCCEEEEECSCCBCCC-GGGTSSEEEEEESSSTTSEEEEEE
T ss_pred CCCCCEEEcCCCEEEeCCCCCCCCCCCCeEEEEEEECCCCcEEEEEEEeeeeecC-CCCCccEEEEEeCCCCCCcEEEEe
Confidence 4799998764 5999999999999999999999999865 68999996 799986 479999999999998899999999
Q ss_pred cCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEeC
Q psy8443 294 CGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330 (330)
Q Consensus 294 cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~~ 330 (330)
||...|.+|+|++|.|+|+|+||.+..++||+|+|++
T Consensus 86 CG~~~p~~i~S~~n~l~v~F~SD~s~~~~GF~a~y~~ 122 (577)
T 4gz9_A 86 CGKIAPSPVVSSGPFLFIKFVSDYETHGAGFSIRYEI 122 (577)
T ss_dssp CSSSCCCCEECSSSEEEEEEECCSSCCCCBCEEEEEE
T ss_pred cCCCCCCCEEEeCCeEEEEEEECCCCCCCCeEEEEEE
Confidence 9999999999999999999999999999999999964
No 23
>2wno_A Tumor necrosis factor-inducible gene 6 protein; glycoprotein, cell adhesion, extracellular matrix; 2.30A {Homo sapiens}
Probab=99.90 E-value=6.9e-23 Score=152.25 Aligned_cols=138 Identities=29% Similarity=0.585 Sum_probs=108.2
Q ss_pred ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccc
Q psy8443 56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQG 135 (330)
Q Consensus 56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~ 135 (330)
...|++.+....|.|.||+||..|+++..|.|.|+++++.+|+|.|..|+|+... .|..|+|+|+++.......++
T Consensus 4 ~~~Cgg~l~~~~G~i~SP~yP~~Yp~n~~C~W~I~~~~g~~I~L~F~~f~le~~~----~C~~D~l~I~dg~~~~~~~~~ 79 (149)
T 2wno_A 4 AKECGGVFTDPKQIFKSPGFPNEYEDNQICYWHIRLKYGQRIHLSFLDFDLEDDP----GCLADYVEIYDSYDDVHGFVG 79 (149)
T ss_dssp CSCCCEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCEEEEEEEEEECCCCT----TCCSSEEEEESSSSSSSSEEE
T ss_pred CCCCCCEEECCceEEECCCCCcCCCCCCEEEEEEEECCCCEEEEEEEEEEecCCC----CCCCCEEEEecCCCCCcceee
Confidence 4579999988899999999999999999999999999999999999999999764 799999999999877777889
Q ss_pred ccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEec-ccCccccC---CCcccccccccCCce
Q psy8443 136 VFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFT-DKDECMTN---NGGCQHECRNTIGSY 197 (330)
Q Consensus 136 ~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~-~~~eC~~~---~~~C~~~C~n~~gsy 197 (330)
++||...|..+.|.++.|++.|.++.....+||.+.|.+ +..+|... ...|++.|.|..|++
T Consensus 80 ~~CG~~~p~~~~S~~n~l~v~F~Sd~~~~~~GF~a~y~~~~~~~~~~~~~~~~~~~~~c~n~~~g~ 145 (149)
T 2wno_A 80 RYCGDELPDDIISTGNVMTLKFLSDASVTAGGFQIKYVAMDPVSKSSQGKNTSTTSTGNKNFLAGR 145 (149)
T ss_dssp EECSSSCCCCEECSSSEEEEEEECCSSCCCCEEEEEEEEECC------------------------
T ss_pred eEcCCCCCCCEEEeCCEEEEEEEECCCCCCCCEEEEEEEECCCccCCCCCCccccccCCCceeccc
Confidence 999999999999999999999999999999999999975 45555432 235788888888765
No 24
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=99.88 E-value=2e-22 Score=183.34 Aligned_cols=112 Identities=34% Similarity=0.643 Sum_probs=101.3
Q ss_pred CCCcceeec-CcceeeCCCCCCCCCCCceeEEEEEeCC-CCEEEEEEE-EEeeCCCCCCCCceEEEEcCCCCCccceeec
Q psy8443 217 GGCKYEITA-PNGVIKTPNHPDYYPSKRECIWHFTTTP-GHRIKLVFQ-EFELEPHQTCAYDHVVMYDGDSPDSLTLGRF 293 (330)
Q Consensus 217 ~~C~~~~~~-~~g~i~sp~~p~~y~~~~~C~w~i~~~~-~~~i~l~f~-~~~l~~~~~C~~d~l~i~~g~~~~~~~~~~~ 293 (330)
..|++.+.. ..|.|.||+||..||++.+|.|+|+++. +++|.|.|. .|+||. ..|.+|||+||||....+.++++|
T Consensus 4 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~p~~~~~I~l~F~~~f~le~-~~C~~D~l~i~dg~~~~~~~l~~~ 82 (579)
T 2qqk_A 4 PPCGGRLNSKDAGYITSPGYPQDYPSHQNCEWIVYAPEPNQKIVLNFNPHFEIEK-HDCKYDFIEIRDGDSESADLLGKH 82 (579)
T ss_dssp -CCCEEEETTSCEEEECTTTTSCCCSSCCEEEEEECSSTTSEEEEEECSCCBCCC-TTSSSSEEEEEESSSTTSEEEEEE
T ss_pred CCCCCEEEeCCCeEEeCCCCCCCCcCCCEEEEEEEECCCCcEEEEEEeccccccc-CCCCeeEEEEEeCCCCCcceeeeE
Confidence 578999885 6899999999999999999999999985 679999999 899996 579999999999998888999999
Q ss_pred cCCCCCCcEEecCCEEEEEEEeCCCCCCCCeEEEEe
Q psy8443 294 CGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 329 (330)
Q Consensus 294 cg~~~~~~~~s~~~~~~v~f~s~~~~~~~GF~~~y~ 329 (330)
||...|..++|++|.|+|+|+||.+..++||+|+|+
T Consensus 83 CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~ 118 (579)
T 2qqk_A 83 CGNIAPPTIISSGSMLYIKFTSDYARQGAGFSLRYE 118 (579)
T ss_dssp CTTSCCCCEECSSSEEEEEEECC---CCCBCEEEEE
T ss_pred CCCCCCCCEEecCCEEEEEEEECCCCCCCceEEEEE
Confidence 999999999999999999999999999999999997
No 25
>3poj_A Mannan-binding lectin serine protease 1; CUB domain, Ca2+ binding site, complex with ethylamine, COMP protein, lectin pathway of complement; 1.45A {Rattus norvegicus} PDB: 3pob_A 3pof_A 3pog_A 3poi_A 3poe_A
Probab=99.81 E-value=1.3e-19 Score=129.03 Aligned_cols=111 Identities=33% Similarity=0.644 Sum_probs=98.9
Q ss_pred cCCCCee-ecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEe-EEEecCCCCCCCCCCCceEEEEeCCCCCcccc
Q psy8443 57 DACGGIL-KHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFT-HFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQ 134 (330)
Q Consensus 57 ~~C~~~~-~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~-~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~ 134 (330)
..|++.+ ....|.|.||+||..|+++..|.|.|.++++.+|+|.|. .|+|+... ...|..|+++|+++. ..+
T Consensus 2 ~~Cgg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~i~l~f~d~f~le~~~--~~~C~~D~l~i~dg~----~~~ 75 (115)
T 3poj_A 2 VECSGNLFTQRTGTITSPDYPNPYPKSSECSYTIDLEEGFMVTLQFEDIFDIEDHP--EVPCPYDYIKIKAGS----KVW 75 (115)
T ss_dssp -CEEEEEECSSEEEEECTTTTSCCCTTCEEEEEEECCTTCCCEEEECSCCBBCCCS--SSSSCSCEEEEEETT----EEE
T ss_pred eECCCceEcCCCEEEcCCCCCcCCcCCCeEEEEEEcCCCCEEEEEEecceecccCC--CCCCCCeEEEEEcCC----ccc
Confidence 4687774 778999999999999999999999999999999999999 59998642 237989999999984 467
Q ss_pred cccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEe
Q psy8443 135 GVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFF 173 (330)
Q Consensus 135 ~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~ 173 (330)
+++||...|..+.+.++.+++.|.++.....+||.+.|.
T Consensus 76 ~~~CG~~~p~~~~s~~~~l~i~F~Sd~~~~~~GF~~~y~ 114 (115)
T 3poj_A 76 GPFCGEKSPEPISTQSHSIQILFRSDNSGENRGWRLSYR 114 (115)
T ss_dssp EEECBSSCCCCEECCCSEEEEEEECCSSCCCCBCEEEEE
T ss_pred ccCcCCCCCCCEEecCCEEEEEEEcCCCCCCCCEEEEEE
Confidence 899999999999999999999999999999999999885
No 26
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=99.79 E-value=4.8e-18 Score=150.20 Aligned_cols=120 Identities=35% Similarity=0.660 Sum_probs=105.3
Q ss_pred ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCC--CCCCCCCceEEEEeCCCCCccc
Q psy8443 56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNL--FQSSCEYDNLTVFSKIGDSFKS 133 (330)
Q Consensus 56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~--~~~~C~~d~l~i~~~~~~~~~~ 133 (330)
...|++.+....|.|.||+||..|+++..|.|.|.+++|.+|.|.|..|+|+.... ....|.+|+|+|+++.......
T Consensus 5 ~~~Cg~~l~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~L~F~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~ 84 (460)
T 2qqo_A 5 SEDCSKNFTSPNGTIESPGFPEKYPHNLDCTFTILAKPKMEIILQFLIFDLEHDPLQVGEGDCKYDWLDIWDGIPHVGPL 84 (460)
T ss_dssp --CCCEEECSSEEEEECTTTTSCCCSSCEEEEEEECCTTCEEEEEEEEEECCCC--------CCSSEEEEESSSTTTSCE
T ss_pred CCCCCCEEeCCceEEeCCCCCCCCCCCCEEEEEEEcCCCCEEEEEEEEEEcccccccccCCCCCCCEEEEEcCCCCCCcc
Confidence 45699999999999999999999999999999999999999999999999987410 0136999999999998777788
Q ss_pred ccccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443 134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175 (330)
Q Consensus 134 ~~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~ 175 (330)
++++||...|..+.|.++.+.+.|.++.....+||.+.|...
T Consensus 85 ~~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 126 (460)
T 2qqo_A 85 IGKYCGTKTPSELRSSTGILSLTFHTDMAVAKDGFSARYYLV 126 (460)
T ss_dssp EEEECTTCCCCCEEECSSEEEEEEECCSSCCCCEEEEEEEEE
T ss_pred cceEeCCcCCcCEEeeCCEEEEEEeccceeecCcEEEEEEEE
Confidence 899999999999999999999999999999999999999764
No 27
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.74 E-value=1.6e-17 Score=116.65 Aligned_cols=104 Identities=21% Similarity=0.508 Sum_probs=93.8
Q ss_pred ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccc
Q psy8443 56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQG 135 (330)
Q Consensus 56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~ 135 (330)
...|++.+....|.|.|| |+++..|.|.|.+++|++|.|.|..|++ .|.+|+|+|+++... ...++
T Consensus 3 ~~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~I~dg~~~-~~~~~ 68 (109)
T 1spp_A 3 YHACGGRLTDDYGTIFTY-----KGPKTECVWTLQVDPKYKLLVSIPTLNL--------TCGKEYVEVLEGAPG-SKSLG 68 (109)
T ss_dssp ECSSCEEEECSEEEEECC-----CSSCSEEEEEEECCTTSEEEEEEEEEEC--------CTTTEEEEEESSSTT-SCEEE
T ss_pred ccCCCCEEeCCcEEEeCC-----CCCCCcEEEEEEcCCCCEEEEEEeeeec--------cCCCCEEEEEeCCCC-Cchhh
Confidence 567999999999999998 6789999999999999999999999997 477899999999865 66889
Q ss_pred ccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443 136 VFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175 (330)
Q Consensus 136 ~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~ 175 (330)
++||.. |..+.| ++.+++.|+++.....+||.+.|.++
T Consensus 69 ~~CG~~-p~~~~S-~n~l~v~F~Sd~~~~~~GF~~~y~~~ 106 (109)
T 1spp_A 69 KFCEGL-SILNRG-SSGMTVKYKRDSGHPASPYEIIFLRD 106 (109)
T ss_dssp EESEEE-EEEEEE-CTTCEEEEEECTTCCCCCCEEEEEEE
T ss_pred hhhCCC-CCCEEE-CCEEEEEEEeCCCCCCCCEEEEEEEe
Confidence 999986 778888 99999999999999999999999764
No 28
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=99.74 E-value=2.9e-17 Score=144.87 Aligned_cols=120 Identities=30% Similarity=0.541 Sum_probs=107.5
Q ss_pred ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCC--CCCCCCCceEEEEeCCCCCccc
Q psy8443 56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNL--FQSSCEYDNLTVFSKIGDSFKS 133 (330)
Q Consensus 56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~--~~~~C~~d~l~i~~~~~~~~~~ 133 (330)
...|++.+....|.|.||+||..|+++..|.|.|.+++|++|.|.|..|+|+.... ....|.+|+|+|+++.......
T Consensus 8 ~~~Cg~~~~~~~G~i~SP~yP~~Yp~~~~C~w~I~~~~g~~I~l~f~~f~le~~~~~~~~~~C~~D~l~i~dg~~~~~~~ 87 (450)
T 2qqm_A 8 GPECSQNYTTPSGVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPH 87 (450)
T ss_dssp -CTTCEEECSSEEEEECTTTTSCCCSSCEEEEEEECGGGCCEEEEEEEEECCCC----CCCSSCSSEEEEESSSTTTSCE
T ss_pred CCCCCCeEeCCcEEEeCCCCCcCCCCCCeEEEEEEeCCCCEEEEEEEEEEeEeccCCCCCCCCCCcEEEEecCCCCCCcc
Confidence 45799999889999999999999999999999999999999999999999987420 0126999999999998877888
Q ss_pred ccccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443 134 QGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175 (330)
Q Consensus 134 ~~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~ 175 (330)
++++||...|..+.|.++.+++.|.++.....+||.+.|...
T Consensus 88 ~~~~CG~~~p~~i~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 129 (450)
T 2qqm_A 88 IGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVL 129 (450)
T ss_dssp EEEECTTCCCCEEEECSSEEEEEEECCSSCCCCEEEEEEEEC
T ss_pred ceeecCCcCCCcEEEcCCEEEEEEEeCCccccCCeEEEEecc
Confidence 999999999999999999999999999999999999999764
No 29
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=99.73 E-value=3e-17 Score=116.63 Aligned_cols=106 Identities=22% Similarity=0.543 Sum_probs=95.7
Q ss_pred cccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCcccc
Q psy8443 55 ARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQ 134 (330)
Q Consensus 55 ~~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~ 134 (330)
....|++.+....|.|.|| |+++..|.|.|.+++|++|.|.|..|+| .|..|+|+|+++... ...+
T Consensus 5 ~~~~Cgg~l~~~~G~i~SP-----Yp~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~i~dg~~~-~~~~ 70 (116)
T 1spp_B 5 GPDECGRVIKDTSGSISNT-----DRQKNLCTWTILMKPDQKVRMAIPYLNL--------ACGKEYVEVFDGLLS-GPSY 70 (116)
T ss_dssp GGGGTTEEECCSEEEEECC-----SSCCSEEEEEEECCTTCEEEEEEEEEEC--------CBTTEEEEEESSSTT-SCEE
T ss_pred CCCCCCCEEeCCceEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeCcc--------cCCCCEEEEEcCCCC-Cccc
Confidence 3567999999889999998 6789999999999999999999999998 477899999999765 6788
Q ss_pred cccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443 135 GVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175 (330)
Q Consensus 135 ~~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~ 175 (330)
+++||.. |..+.+.++.|++.|.++.....+||.+.|.+.
T Consensus 71 ~~~CG~~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 110 (116)
T 1spp_B 71 GKLCAGA-AIVFLSTANTMTIKYNRISGNSSSPFLIYFYGS 110 (116)
T ss_dssp EEESEEE-EEEEECSSSEEEEEEEESSCSCCCCCEEEEEEE
T ss_pred ccccCcC-CCCEEecCCEEEEEEEECCCCCCCCEEEEEEEe
Confidence 9999987 788999999999999999999999999999753
No 30
>1sfp_A ASFP; spermadhesin, bovine seminal plasma protein, acidic seminal fluid protein, CUB domain, X-RAY growth factor; 1.90A {Bos taurus} SCOP: b.23.1.1
Probab=99.71 E-value=9.7e-17 Score=113.70 Aligned_cols=105 Identities=22% Similarity=0.569 Sum_probs=94.5
Q ss_pred ccCCCCeeecCCceEeCCCCCCCCCCCCCcEEEEEcCCCCEEEEEEeEEEecCCCCCCCCCCCceEEEEeCCCCCccccc
Q psy8443 56 RDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQG 135 (330)
Q Consensus 56 ~~~C~~~~~~~~g~~~sp~~p~~~~~~~~C~~~i~~~~g~~~~l~~~~~~l~~~~~~~~~C~~d~l~i~~~~~~~~~~~~ 135 (330)
...|++.+....|.|.|| |+++..|.|.|.+++|++|+|.|..|++ .|.+|+|+|+++... ...++
T Consensus 7 ~~~Cgg~l~~~~G~i~Sp-----y~~~~~C~w~I~~~~g~~I~l~f~~f~l--------~C~~D~l~i~dg~~~-~~~~~ 72 (114)
T 1sfp_A 7 NTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQL--------NCNKESLEIIDGLPG-SPVLG 72 (114)
T ss_dssp ECSSCEEECCSEEEEECC-----CSSCSEEEEEEECCTTCEEEEEEEEEEC--------CTTTEEEEEESSSTT-SCEEE
T ss_pred CCCCCCeEECCcEEEeCC-----CcCCCCEEEEEEeCCCCEEEEEEeeeee--------ecCCCEEEEEcCCCC-Cccee
Confidence 567999999899999997 6689999999999999999999999997 477899999999764 56788
Q ss_pred ccCCCCCCCcEEccCCeEEEEEEeCCCCcccCceEEEecc
Q psy8443 136 VFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175 (330)
Q Consensus 136 ~~c~~~~~~~~~s~~~~~~~~f~~~~~~~~~Gf~~~~~~~ 175 (330)
++||.. |..+.+.++.+++.|+++.....+||.+.|..+
T Consensus 73 ~~CG~~-p~~~~S~~n~l~v~F~Sd~~~~~~GF~~~y~~~ 111 (114)
T 1sfp_A 73 KICEGS-LMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD 111 (114)
T ss_dssp EESEEE-EEEEECSSSEEEEEEEECTTSCCCCCEEEEEEE
T ss_pred EecCcC-CCCEEecCCeEEEEEEECCCCCCCCEEEEEEEE
Confidence 999987 778999999999999999999999999999754
No 31
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.61 E-value=4.8e-16 Score=103.86 Aligned_cols=42 Identities=40% Similarity=0.698 Sum_probs=35.4
Q ss_pred cccCccccCCCccc-ccccccCCceeeeccCCeEEccCCCCcc
Q psy8443 174 TDKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 174 ~~~~eC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
.++|||...+..|. ++|+|+.|+|.|.|++||.+..+++.|.
T Consensus 44 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~Ci 86 (86)
T 1lmj_A 44 MDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 86 (86)
T ss_dssp EECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCCC
T ss_pred CCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCccC
Confidence 36778887776675 5799999999999999999998888773
No 32
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.55 E-value=1.2e-14 Score=109.72 Aligned_cols=49 Identities=43% Similarity=0.854 Sum_probs=41.8
Q ss_pred CceEE----EecccCccccCCCcccc-cccccCCceeeeccCCeEEccCCCCcc
Q psy8443 167 GFSAF----FFTDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 167 Gf~~~----~~~~~~eC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
||.+. .+.++|||...+..|.+ .|+|+.|+|+|.|++||.+..+++.|+
T Consensus 109 G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 109 GFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp TEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred CcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 66653 45799999988777874 799999999999999999999998884
No 33
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.53 E-value=1.8e-15 Score=104.94 Aligned_cols=41 Identities=32% Similarity=0.781 Sum_probs=34.8
Q ss_pred eeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 7 RWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 7 ~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
.| |+|||...++.|.+.|+|++|+|.|.|++||++. +++.|
T Consensus 26 ~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C 66 (107)
T 2w2n_E 26 AM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRC 66 (107)
T ss_dssp CB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEE
T ss_pred CC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCcc
Confidence 46 8999998777899999999999999999999853 44555
No 34
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.52 E-value=2.3e-14 Score=106.39 Aligned_cols=54 Identities=37% Similarity=0.681 Sum_probs=46.3
Q ss_pred CCcccCce---EEEecccCccccCCCcccc-cccccCCceeeeccCCeEEccCCCCcc
Q psy8443 162 SVQKSGFS---AFFFTDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 162 ~~~~~Gf~---~~~~~~~~eC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
..+..||. +..+.++|||...+..|.+ +|+|+.|+|.|.|++||.+..+++.|.
T Consensus 90 C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 90 PICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp TTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred ccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 45678885 5677899999988878875 799999999999999999999998873
No 35
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.51 E-value=9.6e-15 Score=96.40 Aligned_cols=40 Identities=40% Similarity=0.909 Sum_probs=34.2
Q ss_pred eeEeeccccCCCCCCee-eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 7 RWFKFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 7 ~C~dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
+|.|||||.. +.+|.+ .|+|+.|+|+|.|++||++ +|+.|
T Consensus 1 sC~dideC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C 41 (82)
T 1emn_A 1 SAVDMDECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNEC 41 (82)
T ss_dssp CCCCCCSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEE
T ss_pred CCCccccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCcc
Confidence 5889999987 567876 9999999999999999985 45566
No 36
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.48 E-value=6.8e-14 Score=102.99 Aligned_cols=56 Identities=29% Similarity=0.726 Sum_probs=41.0
Q ss_pred CccccCCCcccccc-cccCCceeeeccCCeEEccCCCCcccCCCcceeecCcceeeCCCCCC
Q psy8443 177 DECMTNNGGCQHEC-RNTIGSYICSCHNGYTLLENGHDCKEGGCKYEITAPNGVIKTPNHPD 237 (330)
Q Consensus 177 ~eC~~~~~~C~~~C-~n~~gsy~C~C~~G~~l~~~~~~C~~~~C~~~~~~~~g~i~sp~~p~ 237 (330)
++|...++.|.++| +|+.|+|.|.|++||.+..+++.|.+. ...+-|.+.+++.|.
T Consensus 86 deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~-----~~~pCg~~~~~~~~~ 142 (146)
T 1x7a_L 86 ATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPA-----VPFPCGRVSVSHSPT 142 (146)
T ss_dssp CCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEEC-----SSSCTTCCCTTTTTT
T ss_pred ccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCC-----CCCCCCCcccCcCCc
Confidence 44544455677789 999999999999999999999999752 123445556666654
No 37
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.46 E-value=1.6e-14 Score=96.55 Aligned_cols=41 Identities=41% Similarity=0.903 Sum_probs=34.8
Q ss_pred EeeccccCCCCCCe-eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 9 FKFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 9 ~dideC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
.|||||...++.|. ++|+|++|+|+|.|++||++..+++.|
T Consensus 1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C 42 (87)
T 1z6c_A 1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSC 42 (87)
T ss_dssp CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEE
T ss_pred CccccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcC
Confidence 38999998776783 499999999999999999977666666
No 38
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.44 E-value=8.2e-14 Score=98.88 Aligned_cols=49 Identities=37% Similarity=0.790 Sum_probs=38.5
Q ss_pred ccCce---EEEecccCccccCCCcccccccccCCceeeeccCCeEEccC-CCCc
Q psy8443 165 KSGFS---AFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLEN-GHDC 214 (330)
Q Consensus 165 ~~Gf~---~~~~~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~-~~~C 214 (330)
..||. +..+.++|||... .+|.++|+|+.|+|.|.|++||.+..+ ++.|
T Consensus 66 ~~Gy~~~~g~~C~dideC~~~-~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 66 PEGYILDDGFICTDIDECENG-GFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp CTTEEEETTTEEEECCHHHHC-SSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CCCccCCCCCccccccccCCC-CCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 34554 3456799999873 567888999999999999999998776 6554
No 39
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.42 E-value=2.9e-14 Score=123.54 Aligned_cols=41 Identities=34% Similarity=0.966 Sum_probs=0.0
Q ss_pred EeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 9 FKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 9 ~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
.|+|||...++.|.+.|.|+.|+|+|.|++||+|..+|+.|
T Consensus 1 ~~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C 41 (386)
T 3v65_B 1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC 41 (386)
T ss_dssp -----------------------------------------
T ss_pred CCcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc
Confidence 48999998888999999999999999999999988888888
No 40
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.41 E-value=1.6e-13 Score=96.79 Aligned_cols=41 Identities=37% Similarity=0.792 Sum_probs=34.8
Q ss_pred cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
+++|...++.|.++|+|+.++|.|.|++||.+..+++.|.+
T Consensus 54 ~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~ 94 (114)
T 1aut_L 54 FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 94 (114)
T ss_dssp SSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred CCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCc
Confidence 34566556678889999999999999999999999999864
No 41
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.39 E-value=9.6e-13 Score=95.99 Aligned_cols=40 Identities=45% Similarity=0.981 Sum_probs=34.3
Q ss_pred eeEeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 7 RWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 7 ~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+|.|||||....++|.+ +|+|+.|+|+|.|++||+ |..|.
T Consensus 1 Sc~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~----G~~C~ 42 (135)
T 2vj3_A 1 SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRCE 42 (135)
T ss_dssp --CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEE----STTSC
T ss_pred CCcccccccCCCCCCCCCCEeECCCCCEEEECCCCCc----CCccc
Confidence 47899999976678976 999999999999999998 77883
No 42
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.34 E-value=2.4e-13 Score=104.06 Aligned_cols=40 Identities=40% Similarity=0.926 Sum_probs=34.4
Q ss_pred CccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 177 ~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
++|...++.|.+.|.|+.|+|.|.|++||.|..++..|.+
T Consensus 82 deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCcccc
Confidence 4566556678889999999999999999999999999975
No 43
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.34 E-value=9.4e-13 Score=114.54 Aligned_cols=42 Identities=36% Similarity=0.804 Sum_probs=34.9
Q ss_pred ccCccccCCCcccccccccCCceeeeccCCeEEccCCCCcccC
Q psy8443 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEG 217 (330)
Q Consensus 175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~~ 217 (330)
++|||. .+..|.+.|.|+.|+|.|.|++||.+..+++.|...
T Consensus 39 dideC~-~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~ 80 (400)
T 3p5b_L 39 DIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV 80 (400)
T ss_dssp ECCCCS-TTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCS
T ss_pred Cchhhh-ccCCCCCccCCCccceeeeccccccccccccceeec
Confidence 455665 245687889999999999999999999999999764
No 44
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.32 E-value=1.5e-12 Score=96.06 Aligned_cols=44 Identities=32% Similarity=0.687 Sum_probs=37.5
Q ss_pred ecccCccccCCCccc--ccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 173 FTDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 173 ~~~~~eC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
+.+++||......|. +.|+|+.|+|.|.|++||.+..+++.|.+
T Consensus 93 C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~ 138 (143)
T 2bou_A 93 CQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK 138 (143)
T ss_dssp EEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred cCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence 358899987667776 57999999999999999999988888864
No 45
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=99.26 E-value=2.9e-12 Score=80.31 Aligned_cols=44 Identities=34% Similarity=0.664 Sum_probs=40.8
Q ss_pred eEeeccccCCCCCCeeeEEeecc-eEEEecCCCcEEcCCCCcccc
Q psy8443 8 WFKFDECALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 8 C~dideC~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~dg~~C~~ 51 (330)
..|||||...+++|.|.|.|++| +|+|+|++||.|..|+++|++
T Consensus 2 ~~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 2 KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp CSCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred CcccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 46899999888899999999999 999999999999999999965
No 46
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.25 E-value=1.8e-12 Score=94.08 Aligned_cols=40 Identities=40% Similarity=0.926 Sum_probs=33.3
Q ss_pred CccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 177 ~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
++|...++.|.+.|+++.|+|.|.|++||.+..+++.|.+
T Consensus 82 d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 82 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp CGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCc
Confidence 4455555567778999999999999999999999999964
No 47
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=99.22 E-value=7.1e-12 Score=75.27 Aligned_cols=41 Identities=32% Similarity=0.805 Sum_probs=37.3
Q ss_pred eccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443 11 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 11 ideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
.|||...++.|.+.|+|++|+|+|.|++||.|..|+++|++
T Consensus 1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence 38998777889999999999999999999999999999965
No 48
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.21 E-value=9.9e-12 Score=91.20 Aligned_cols=38 Identities=34% Similarity=0.815 Sum_probs=33.5
Q ss_pred eeEeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 7 RWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 7 ~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.|.|||+|.. .+|.+ +|+|+.|+|.|.|++||+ |+.|.
T Consensus 43 ~c~did~C~~--~pC~n~g~C~~~~g~y~C~C~~G~~----G~~C~ 82 (142)
T 2c4f_L 43 SYSDGDQCAS--SPCQNGGSCKDQLQSYICFCLPAFE----GRNCE 82 (142)
T ss_dssp HHTTCCGGGG--CCCCTTCEEEEETTEEEEECCTTEE----STTSC
T ss_pred cCCccCcCcC--CCcCCCCEEeCCCCCEEeeCCCCcc----CCccc
Confidence 5789999985 56876 999999999999999998 88883
No 49
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=99.19 E-value=1.9e-11 Score=73.27 Aligned_cols=42 Identities=48% Similarity=1.071 Sum_probs=37.8
Q ss_pred EeeccccCC--------CCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 9 FKFDECALE--------DHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 9 ~dideC~~~--------~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.|||||... ...|.+.|+|++|+|+|.|++||.+..++++|+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence 589999864 367999999999999999999999999999994
No 50
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.14 E-value=5.2e-11 Score=111.43 Aligned_cols=42 Identities=36% Similarity=0.804 Sum_probs=35.3
Q ss_pred ccCccccCCCcccccccccCCceeeeccCCeEEccCCCCcccC
Q psy8443 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEG 217 (330)
Q Consensus 175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~~ 217 (330)
+++||. .+..|.+.|.|+.|+|.|.|++||.+..+++.|.+.
T Consensus 351 dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~ 392 (791)
T 3m0c_C 351 DIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAV 392 (791)
T ss_dssp CCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEET
T ss_pred cCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeeec
Confidence 455665 345688899999999999999999999999999763
No 51
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.11 E-value=5.3e-11 Score=91.94 Aligned_cols=38 Identities=29% Similarity=0.633 Sum_probs=32.3
Q ss_pred eeeeEeeccccCC--CCCCee--eEEeec-----ceEEEecCCCcEE
Q psy8443 5 RIRWFKFDECALE--DHGCEH--TCKNIL-----GGYECSCKIGYEL 42 (330)
Q Consensus 5 ~~~C~dideC~~~--~~~C~~--~C~n~~-----gsy~C~C~~G~~l 42 (330)
+.+|.|||||... ..+|.+ +|+|+. |+|+|.|++||+.
T Consensus 38 ~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g 84 (186)
T 1z1y_A 38 ENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTL 84 (186)
T ss_dssp TTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEE
T ss_pred CCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCcc
Confidence 3479999999854 467974 999999 8999999999993
No 52
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.05 E-value=2.2e-10 Score=102.86 Aligned_cols=44 Identities=25% Similarity=0.690 Sum_probs=33.4
Q ss_pred EeeccccCCCCCCee--eEEeecc-eEEE-ecCCCcEEcCCCCccccccccccCCC
Q psy8443 9 FKFDECALEDHGCEH--TCKNILG-GYEC-SCKIGYELHSDGKICVGSVKARDACG 60 (330)
Q Consensus 9 ~dideC~~~~~~C~~--~C~n~~g-sy~C-~C~~G~~l~~dg~~C~~~~~~~~~C~ 60 (330)
.|||||.. ++|.+ +|+|+.+ +|+| .|++||+ ++++.|+ .+++|.
T Consensus 1 ~DIDeC~~--nPC~~gg~C~n~~~Gsy~C~~C~~Gyt--Gdg~~Ce----DiDEC~ 48 (634)
T 1yo8_A 1 ADPDGCLS--NPCFPGAQCSSFPDGSWSCGFCPVGFL--GNGTHCE----DLDECA 48 (634)
T ss_dssp ---CGGGG--CCSCTTCCEEECTTSCEEECCCCTTBC--SCSSSCC----BCCTTT
T ss_pred CcccccCC--CCCCCCCEEecCCCCCeECCcCCCccC--CCCCCcc----cccccc
Confidence 48999974 57875 9999985 5999 9999998 7779994 466674
No 53
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.03 E-value=8.4e-11 Score=109.32 Aligned_cols=39 Identities=36% Similarity=0.913 Sum_probs=33.7
Q ss_pred eeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 10 KFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 10 dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
+++||...++.|.+.|+|++|+|+|.|++||++ .+++.|
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C 331 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRC 331 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCC
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcc
Confidence 688998877789999999999999999999986 566667
No 54
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=99.01 E-value=1.3e-10 Score=68.34 Aligned_cols=39 Identities=38% Similarity=0.944 Sum_probs=34.9
Q ss_pred ccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccccc
Q psy8443 14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGS 52 (330)
Q Consensus 14 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~ 52 (330)
|...+++|.+.|+|++|+|+|.|++||+|..|+++|+++
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~di 39 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVST 39 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEEC
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccC
Confidence 555677899999999999999999999999999999653
No 55
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.98 E-value=3.7e-10 Score=66.91 Aligned_cols=38 Identities=39% Similarity=0.915 Sum_probs=34.5
Q ss_pred ccCCCCCCeeeEEeecc-eEEEecCCCcEEcCCCCcccc
Q psy8443 14 CALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 14 C~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~dg~~C~~ 51 (330)
|...+++|+|.|+|++| +|+|+|++||+|..|+++|++
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d 40 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence 66666789999999999 899999999999999999965
No 56
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.95 E-value=6.5e-10 Score=81.97 Aligned_cols=44 Identities=18% Similarity=0.489 Sum_probs=36.3
Q ss_pred CcccCceEEEec-ccCccccCCCcccccccccCCceeeeccCCeE
Q psy8443 163 VQKSGFSAFFFT-DKDECMTNNGGCQHECRNTIGSYICSCHNGYT 206 (330)
Q Consensus 163 ~~~~Gf~~~~~~-~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~ 206 (330)
.+..||.+..+. ++++|...+....++|+++.++|.|.|++||.
T Consensus 83 ~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~ 127 (143)
T 4d90_A 83 KCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM 127 (143)
T ss_dssp ECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCB
T ss_pred ECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCc
Confidence 356677777776 89999977655567899999999999999998
No 57
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.95 E-value=2.7e-10 Score=75.71 Aligned_cols=45 Identities=29% Similarity=0.657 Sum_probs=40.6
Q ss_pred eeeeEeeccccCCCCCCe-eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 5 RIRWFKFDECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 5 ~~~C~dideC~~~~~~C~-~~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
+..|.|||||...+..|. ++|+|++|+|+|.|++||++..++++|
T Consensus 40 g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~C 85 (86)
T 1lmj_A 40 MKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 85 (86)
T ss_dssp SSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCCC
T ss_pred CCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCcc
Confidence 678999999998777787 499999999999999999998898888
No 58
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.90 E-value=1e-09 Score=66.51 Aligned_cols=39 Identities=36% Similarity=0.798 Sum_probs=34.8
Q ss_pred ccCCCCCCeeeEEeec-ceEEEecCCCcEEcCCCCccccc
Q psy8443 14 CALEDHGCEHTCKNIL-GGYECSCKIGYELHSDGKICVGS 52 (330)
Q Consensus 14 C~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~dg~~C~~~ 52 (330)
|...+++|+|.|+|++ |+|.|.|++||.|..|+++|++.
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~ 41 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPA 41 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEES
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCC
Confidence 6666778999999999 69999999999999999999753
No 59
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.87 E-value=9.4e-10 Score=92.56 Aligned_cols=42 Identities=43% Similarity=0.884 Sum_probs=34.0
Q ss_pred ccCccccC-CCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 175 DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 175 ~~~eC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
+++||... +.+|.+.|.|+.++|.|.|++||.+..++..|.+
T Consensus 42 ~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~ 84 (317)
T 3h5c_B 42 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVP 84 (317)
T ss_dssp CSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEE
T ss_pred CcccCCCCCCCCCcCccccCCCeeEEecccccccccccccccc
Confidence 44555542 3567778999999999999999999999999976
No 60
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.86 E-value=6.4e-09 Score=80.15 Aligned_cols=52 Identities=27% Similarity=0.423 Sum_probs=35.8
Q ss_pred cccCceEE--EecccCccccCCCccccccc----ccCCceeeeccCCeEEcc-CCCCccc
Q psy8443 164 QKSGFSAF--FFTDKDECMTNNGGCQHECR----NTIGSYICSCHNGYTLLE-NGHDCKE 216 (330)
Q Consensus 164 ~~~Gf~~~--~~~~~~eC~~~~~~C~~~C~----n~~gsy~C~C~~G~~l~~-~~~~C~~ 216 (330)
+..||.+. .+. +++|...+..-.++|+ ++.++|.|.|++||.+.. ++..|.+
T Consensus 78 C~~G~~g~~~~C~-~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~ 136 (186)
T 1z1y_A 78 CIEGYTLXEDTCV-LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTX 136 (186)
T ss_dssp ECTTEEEETTEEE-EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEE
T ss_pred CCCCCccCCCCCC-CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceE
Confidence 34455544 233 6888876432235577 999999999999999865 6677764
No 61
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.80 E-value=1.9e-09 Score=67.51 Aligned_cols=43 Identities=40% Similarity=1.010 Sum_probs=40.7
Q ss_pred cccCccccCCCcccccccccCC-ceeeeccCCeEEccCCCCccc
Q psy8443 174 TDKDECMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 174 ~~~~eC~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~~~~~C~~ 216 (330)
.|++||..+++.|.+.|.|+.| +|.|.|++||.|..|+++|.+
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d 46 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 46 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccC
Confidence 5899999999999999999999 899999999999999999976
No 62
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.79 E-value=2.1e-09 Score=64.35 Aligned_cols=41 Identities=39% Similarity=0.925 Sum_probs=37.5
Q ss_pred cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
.|||..+++.|.+.|.|+.|+|.|.|++||.|..+++.|.+
T Consensus 1 ~dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 1 RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp -CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeecc
Confidence 37898888889999999999999999999999999999976
No 63
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.77 E-value=3.5e-09 Score=78.26 Aligned_cols=46 Identities=30% Similarity=0.730 Sum_probs=42.0
Q ss_pred eeeeeEeeccccCCCCCCee-eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 4 LRIRWFKFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 4 ~~~~C~dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
.+.+|.|||||...++.|.+ +|+|++|+|+|.|++||++..++++|
T Consensus 100 ~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C 146 (147)
T 2w86_A 100 KGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRIC 146 (147)
T ss_dssp ETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCB
T ss_pred CCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCee
Confidence 46789999999977778986 99999999999999999999999988
No 64
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.73 E-value=6e-09 Score=62.17 Aligned_cols=43 Identities=47% Similarity=1.067 Sum_probs=37.8
Q ss_pred cccCccccC--------CCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 174 TDKDECMTN--------NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 174 ~~~~eC~~~--------~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
.|+|||... ...|.+.|+|+.|+|.|.|++||.+..+++.|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 478999875 3679999999999999999999999999999864
No 65
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=98.72 E-value=9.9e-09 Score=64.77 Aligned_cols=39 Identities=26% Similarity=0.484 Sum_probs=28.4
Q ss_pred EeeccccCCCCCCee--eEEeecceEEEec-CCCcEEcCCCC
Q psy8443 9 FKFDECALEDHGCEH--TCKNILGGYECSC-KIGYELHSDGK 47 (330)
Q Consensus 9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C-~~G~~l~~dg~ 47 (330)
.|||||....+.|.+ +|+|++|+|+|.| ..||....++.
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~ 42 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE 42 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence 389999987778953 8999999999992 24554433333
No 66
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.67 E-value=2.7e-09 Score=73.75 Aligned_cols=44 Identities=36% Similarity=0.871 Sum_probs=4.8
Q ss_pred eeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 5 RIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 5 ~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
+.+|.|||||.. ...|.+.|+|++|+|.|.|++||++..++++|
T Consensus 63 g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~~C 106 (107)
T 2w2n_E 63 QRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 106 (107)
T ss_dssp TTEEEC---------------------------------------
T ss_pred CCccccccccCC-CCCcCCeeecCCCCEEEECCCCceECCCCCcc
Confidence 368999999984 46798999999999999999999988888887
No 67
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.63 E-value=1.4e-08 Score=59.54 Aligned_cols=38 Identities=37% Similarity=0.924 Sum_probs=34.5
Q ss_pred cccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 179 C~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
|..+++.|.+.|.|+.|+|.|.|++||.|..|+++|.+
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~d 38 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS 38 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEE
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCcccc
Confidence 45567889999999999999999999999999999975
No 68
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.60 E-value=2.7e-08 Score=65.26 Aligned_cols=44 Identities=36% Similarity=0.889 Sum_probs=36.8
Q ss_pred eeeeeEeeccccCCCCCCee-eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 4 LRIRWFKFDECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 4 ~~~~C~dideC~~~~~~C~~-~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
.+..|.|||||.. ..+|.+ +|+|+.|+|+|.|++||++..+ +.|
T Consensus 37 ~g~~C~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 37 AGNECVDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEPGPM-MTC 81 (82)
T ss_dssp ETTEEEECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCCCSS-SCC
T ss_pred CCCccCCcccccC-CCCCCCCEeECCCCCEEeECCCCeEeCCC-Ccc
Confidence 3668999999985 357874 9999999999999999997666 666
No 69
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.52 E-value=1.3e-08 Score=74.68 Aligned_cols=33 Identities=33% Similarity=0.934 Sum_probs=20.0
Q ss_pred eeEeeccccCCCCCCee--eEEeecceEEEecCCCcE
Q psy8443 7 RWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYE 41 (330)
Q Consensus 7 ~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~ 41 (330)
+|.|||||.. ++|.+ +|+|+.|+|.|.|++||+
T Consensus 44 ~c~dideC~~--~pC~n~g~C~~~~~~y~C~C~~G~~ 78 (146)
T 1x7a_L 44 QYVDGDQCEP--NPCLNGGLCKDDINSYECWCQVGFE 78 (146)
T ss_dssp ------CCSS--CSSCTTCEEEECSSCEEEECCSSEE
T ss_pred cCCCcCcCCC--CCCCCCCEeECCCCCEEEecCCCCc
Confidence 6778888864 45664 788888888888888876
No 70
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.51 E-value=6.5e-08 Score=69.96 Aligned_cols=47 Identities=28% Similarity=0.640 Sum_probs=36.2
Q ss_pred eeeeEe-e-ccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443 5 RIRWFK-F-DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 5 ~~~C~d-i-deC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
+..|.+ | |+|...++.|.++|+|+.|+|.|.|++||++..+|+.|.+
T Consensus 73 G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp --------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCc
Confidence 456877 6 8998766789899999999999999999999999999964
No 71
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.50 E-value=2e-08 Score=66.68 Aligned_cols=44 Identities=39% Similarity=0.803 Sum_probs=38.8
Q ss_pred eeeeEeeccccCCCCCCeeeEEeecceEEEec--CCCcEEcCCCCccc
Q psy8443 5 RIRWFKFDECALEDHGCEHTCKNILGGYECSC--KIGYELHSDGKICV 50 (330)
Q Consensus 5 ~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C--~~G~~l~~dg~~C~ 50 (330)
+.+|.|||||.. ++|.++|+|++|+|+|.| .+||.+..+++.|+
T Consensus 39 g~~C~dideC~~--~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~ 84 (87)
T 1z6c_A 39 SKSCEDIDECSE--NMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCE 84 (87)
T ss_dssp TTEEECCCHHHH--SCCSSEECCCSSSCCEECCSSSCCBCCTTSSSCB
T ss_pred CCcCCCcCeeCC--CCCCCEEEccCCCEEEECCCCcCCcccCCCCcce
Confidence 578999999975 579899999999999999 58998888888884
No 72
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.50 E-value=4.7e-08 Score=57.77 Aligned_cols=38 Identities=42% Similarity=1.147 Sum_probs=34.6
Q ss_pred cccCCCcccccccccCC-ceeeeccCCeEEccCCCCccc
Q psy8443 179 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 179 C~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~~~~~C~~ 216 (330)
|..+++.|.+.|.|+.| +|.|.|++||.|..|+++|.+
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d 40 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccC
Confidence 66667889999999999 899999999999999999976
No 73
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.49 E-value=6.8e-08 Score=73.91 Aligned_cols=47 Identities=28% Similarity=0.640 Sum_probs=36.3
Q ss_pred eeeeEe-e-ccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443 5 RIRWFK-F-DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 5 ~~~C~d-i-deC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
+..|.+ | |||...++.|.+.|+|+.|+|.|.|++||.+..+|+.|.+
T Consensus 73 G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp --------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCcccc
Confidence 456876 6 8998766789999999999999999999999999999964
No 74
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.49 E-value=1.3e-07 Score=52.21 Aligned_cols=35 Identities=40% Similarity=0.991 Sum_probs=30.3
Q ss_pred EeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 9 FKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
.|+|||.. .+|.+ +|+++.++|+|.|++||+ |..|
T Consensus 1 ~d~d~C~~--~pC~ngg~C~~~~~~~~C~C~~G~~----G~~C 37 (39)
T 1edm_B 1 VDGDQCES--NPCLNGGSCKDDINSYECWCPFGFE----GKNC 37 (39)
T ss_dssp CCCCTTTT--CCCCTTCEEEEETTEEEEECCTTCC----STTS
T ss_pred CccccCCC--CCCCCCCEeEcCCCceEeECCCCCc----CCcc
Confidence 37899985 46765 999999999999999998 7788
No 75
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.47 E-value=3.5e-08 Score=69.68 Aligned_cols=44 Identities=30% Similarity=0.619 Sum_probs=37.4
Q ss_pred eeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCC-CCcc
Q psy8443 5 RIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSD-GKIC 49 (330)
Q Consensus 5 ~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~d-g~~C 49 (330)
+.+|.|||||.. .++|.++|+|++|+|+|.|++||++..+ ++.|
T Consensus 74 g~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 74 GFICTDIDECEN-GGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp TTEEEECCHHHH-CSSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred CCccccccccCC-CCCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 568999999987 3678779999999999999999997766 6655
No 76
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.46 E-value=7.5e-08 Score=58.22 Aligned_cols=38 Identities=39% Similarity=0.991 Sum_probs=34.5
Q ss_pred cccCCCcccccccccC-CceeeeccCCeEEccCCCCccc
Q psy8443 179 CMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 179 C~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
|..+++.|.+.|.|+. |+|.|.|++||.|..|+++|.+
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d 40 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 40 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEE
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccC
Confidence 5667788999999999 6999999999999999999976
No 77
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.45 E-value=8.2e-08 Score=70.51 Aligned_cols=46 Identities=26% Similarity=0.596 Sum_probs=40.5
Q ss_pred eeeeEeeccccCCCCCCe--eeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 5 RIRWFKFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 5 ~~~C~dideC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+..|.|||||....+.|. ++|+|++|+|+|.|++||++..+++.|.
T Consensus 90 ~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 137 (143)
T 2bou_A 90 ENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQ 137 (143)
T ss_dssp GCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSB
T ss_pred CCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCc
Confidence 458999999997667897 4999999999999999999888888884
No 78
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.42 E-value=5.6e-08 Score=84.03 Aligned_cols=47 Identities=34% Similarity=0.746 Sum_probs=24.8
Q ss_pred ceeeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 3 KLRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 3 ~~~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+++.+|.|||||. .++.|.+.|+|++|+|.|.|++||++..++++|.
T Consensus 36 ~~~~~C~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 36 EDGRTCQDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp -----------------CCTTEEC-----CCEECCTTEEECTTSSCEE
T ss_pred CCCCccCccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeEC
Confidence 4578899999998 3568999999999999999999999999999994
No 79
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=98.40 E-value=5.5e-08 Score=77.92 Aligned_cols=42 Identities=29% Similarity=0.809 Sum_probs=33.8
Q ss_pred EeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccccc
Q psy8443 9 FKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICVGS 52 (330)
Q Consensus 9 ~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~~~ 52 (330)
.|||||....+.|.. .|+|++|+|.|.|++||. ++|+.|.+.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~ 46 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAE 46 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEET
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCC
Confidence 589999977788974 899999999999999998 889999654
No 80
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.37 E-value=1.8e-07 Score=65.56 Aligned_cols=45 Identities=33% Similarity=0.643 Sum_probs=38.9
Q ss_pred eeEee---ccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443 7 RWFKF---DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 7 ~C~di---deC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
.|.++ +||...++.|.++|+|+.|+|+|.|++||++..+++.|++
T Consensus 47 ~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~ 94 (114)
T 1aut_L 47 FCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 94 (114)
T ss_dssp TSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred CcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCc
Confidence 46664 4698766789999999999999999999999999999964
No 81
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.36 E-value=7e-07 Score=80.46 Aligned_cols=38 Identities=32% Similarity=0.577 Sum_probs=33.7
Q ss_pred eeeeEeeccccCCCCCCee-----eEEeecceEEEe-cCCCcEE
Q psy8443 5 RIRWFKFDECALEDHGCEH-----TCKNILGGYECS-CKIGYEL 42 (330)
Q Consensus 5 ~~~C~dideC~~~~~~C~~-----~C~n~~gsy~C~-C~~G~~l 42 (330)
+.+|.+|+||...++.|.+ +|+|+.++|+|. |++||+.
T Consensus 38 g~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G 81 (634)
T 1yo8_A 38 GTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRG 81 (634)
T ss_dssp SSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEE
T ss_pred CCCccccccccCCCCcccCCccccceeeccCceecccCCCCccc
Confidence 4679999999987777976 799999999999 9999983
No 82
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.28 E-value=2.5e-07 Score=80.30 Aligned_cols=64 Identities=27% Similarity=0.633 Sum_probs=38.2
Q ss_pred ccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccccccc--ccCCCCeeecCCceEeCCCCC
Q psy8443 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKA--RDACGGILKHSNGTLTSPSFP 76 (330)
Q Consensus 12 deC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~--~~~C~~~~~~~~g~~~sp~~p 76 (330)
|||...++.|.+.|+|++|+|.|.|++||++ .+++.|++..+. ...|.....+..|.+.+...+
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~~g~~~C~C~~ 66 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEE 66 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCSTTSSCSSCCBCCSSSCBCCCCT
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhccCCCCCccCCCccceeeeccc
Confidence 5677666667777777777777777777776 567777543332 234444444555555554433
No 83
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.18 E-value=4.3e-07 Score=77.33 Aligned_cols=39 Identities=41% Similarity=0.980 Sum_probs=27.1
Q ss_pred eccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 11 FDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 11 ideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
||||. .++.|.|.|.|++|+|.|.|++||.|..|+++|.
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~ 39 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCK 39 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEECTTSSCEE
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCccc
Confidence 68998 5678999999999999999999999999999994
No 84
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.17 E-value=1.6e-06 Score=51.24 Aligned_cols=37 Identities=35% Similarity=0.898 Sum_probs=31.4
Q ss_pred eeccccCC-CCCCee--eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443 10 KFDECALE-DHGCEH--TCK--NILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 10 dideC~~~-~~~C~~--~C~--n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
|||||... ..+|.+ +|+ +..++|.|.|++||+ |..|+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence 79999863 247875 999 889999999999998 88994
No 85
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=98.17 E-value=5e-07 Score=74.51 Aligned_cols=42 Identities=43% Similarity=0.842 Sum_probs=37.7
Q ss_pred eeccccCC-CCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443 10 KFDECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 10 dideC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
|+|||... +++|+|.|.|+.|+|+|+|.+||.|..|+++|.+
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEE
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCcccc
Confidence 57999987 7899999999999999999999999999999954
No 86
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.13 E-value=8.9e-07 Score=64.67 Aligned_cols=47 Identities=32% Similarity=0.615 Sum_probs=38.4
Q ss_pred eeeeEe-eccc---cCCCCCCeeeEEeecc-eEEEecCCCcEEcCCCCcccc
Q psy8443 5 RIRWFK-FDEC---ALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 5 ~~~C~d-ideC---~~~~~~C~~~C~n~~g-sy~C~C~~G~~l~~dg~~C~~ 51 (330)
+.+|.+ +++| ...++.|.++|+|+.| +|+|.|++||.+..+|+.|.+
T Consensus 78 G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 78 GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCCC
Confidence 345765 6775 4445678889999999 999999999999999999964
No 87
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.11 E-value=2.4e-06 Score=50.42 Aligned_cols=36 Identities=25% Similarity=0.492 Sum_probs=29.2
Q ss_pred EeeccccCCCCCCee--eEE-----eecceEEEecCCCcEEcCCCCccc
Q psy8443 9 FKFDECALEDHGCEH--TCK-----NILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 9 ~dideC~~~~~~C~~--~C~-----n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.+||||.+ .+|.+ +|+ +..++|+|.|++||+ |+.|+
T Consensus 6 ~~~~eC~s--~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 6 VKCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp EECCSTTT--TTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred ccCCCCcC--CCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 68999986 46765 995 567899999999999 99994
No 88
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=98.07 E-value=3.2e-06 Score=53.18 Aligned_cols=38 Identities=29% Similarity=0.595 Sum_probs=27.8
Q ss_pred ccCccccCCCccc--ccccccCCceeeecc-CCeEEccCCC
Q psy8443 175 DKDECMTNNGGCQ--HECRNTIGSYICSCH-NGYTLLENGH 212 (330)
Q Consensus 175 ~~~eC~~~~~~C~--~~C~n~~gsy~C~C~-~G~~l~~~~~ 212 (330)
|+|||......|. +.|+|+.|+|.|.+. .||.+..++.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~ 42 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGE 42 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCS
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCC
Confidence 7899998877885 469999999999822 3554444443
No 89
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.04 E-value=1.2e-06 Score=82.21 Aligned_cols=47 Identities=34% Similarity=0.846 Sum_probs=41.0
Q ss_pred eeeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443 4 LRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 4 ~~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
.+.+|.|||||. .+..|.+.|+|+.|+|+|.|++||.+..++++|..
T Consensus 345 ~g~~C~dideC~-~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~ 391 (791)
T 3m0c_C 345 AQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 391 (791)
T ss_dssp TTTEEECCCCCS-SSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEE
T ss_pred CCCccccCcccC-CCCCCCCeeecCCCCceeecCCCCEeCCCCceeee
Confidence 467899999998 35689999999999999999999999889999953
No 90
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.03 E-value=1.9e-06 Score=57.46 Aligned_cols=37 Identities=19% Similarity=0.704 Sum_probs=28.8
Q ss_pred ccCccccCCCcccccccccC--CceeeeccCCeEEccCCCCcc
Q psy8443 175 DKDECMTNNGGCQHECRNTI--GSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 175 ~~~eC~~~~~~C~~~C~n~~--gsy~C~C~~G~~l~~~~~~C~ 215 (330)
++++|..++...+++|++.. ++|.|.|++||. |..|+
T Consensus 47 ~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 47 PVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp CEEECSSCCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred cCCcccCCCCCCCCEeecCCCCCCeEeECCCCCc----CCcCC
Confidence 67788876644456799987 999999999997 55664
No 91
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.02 E-value=2.7e-06 Score=71.33 Aligned_cols=47 Identities=38% Similarity=0.701 Sum_probs=40.6
Q ss_pred eeeeE-eeccccCC-CCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443 5 RIRWF-KFDECALE-DHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 5 ~~~C~-dideC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
+..|. |+|||... +++|.+.|+|+.|+|.|.|++||++..++..|.+
T Consensus 36 g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~ 84 (317)
T 3h5c_B 36 GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVP 84 (317)
T ss_dssp SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEE
T ss_pred CCccccCcccCCCCCCCCCcCccccCCCeeEEecccccccccccccccc
Confidence 44687 99999863 3689999999999999999999998888999954
No 92
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.00 E-value=1.8e-06 Score=52.21 Aligned_cols=38 Identities=29% Similarity=0.565 Sum_probs=31.3
Q ss_pred eeEeeccccCCCCCCe----eeEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 7 RWFKFDECALEDHGCE----HTCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 7 ~C~dideC~~~~~~C~----~~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
.|.++|||.. .+|. .+|+|+.++|.|.|++||++ |..|
T Consensus 7 ~~~~~d~C~s--nPC~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C 48 (61)
T 2k2s_B 7 LSETPAACSS--NPCGPEAAGTCKETNSGYICRCNQGYRI---SLDG 48 (61)
T ss_dssp CTTSCCHHHH--CSSCSSSCCEEEECSSEEEEECCTTEEE---EECS
T ss_pred hcCCCCcCcC--CCCcCCCccccccCCCceEeECCCCCcc---CCCC
Confidence 4789999986 4575 48999999999999999973 4567
No 93
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.82 E-value=4e-06 Score=66.85 Aligned_cols=40 Identities=10% Similarity=-0.033 Sum_probs=33.5
Q ss_pred eeeeEeeccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 5 RIRWFKFDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 5 ~~~C~dideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+.+|.+++||+.. +|.+ +|++..++|+|.|++||+ |..|.
T Consensus 93 G~~c~~~~eC~s~--pC~ngG~C~~~~~sy~C~C~~Gf~----G~~Ce 134 (267)
T 4fbr_A 93 GARDKQNIVAVSI--KSNDGGKTLTGTTTYNGEGPIGFK----SEVTD 134 (267)
T ss_dssp CCCSSCCEEEEEE--ECSSTTSEEEEEEEETTSCCEEEE----EEECC
T ss_pred cCccccccccCCC--CCCCCCEEecCCccEEeeCCCCcc----ccCCC
Confidence 5678888899864 4654 999999999999999999 78885
No 94
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.81 E-value=1.1e-05 Score=44.14 Aligned_cols=32 Identities=34% Similarity=0.716 Sum_probs=27.3
Q ss_pred ccCccccCCCcccccccccCCceeeeccCCeE
Q psy8443 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYT 206 (330)
Q Consensus 175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~ 206 (330)
++++|..++....++|++..++|.|.|++||.
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~ 33 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFE 33 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCc
Confidence 67899876655556899999999999999997
No 95
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.80 E-value=2.1e-05 Score=44.60 Aligned_cols=38 Identities=26% Similarity=0.776 Sum_probs=30.4
Q ss_pred EeeccccCC-CCCCee-eEEeec--ceEEEecCCCcEEcCCCCccc
Q psy8443 9 FKFDECALE-DHGCEH-TCKNIL--GGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 9 ~dideC~~~-~~~C~~-~C~n~~--gsy~C~C~~G~~l~~dg~~C~ 50 (330)
++|++|... ..+|.+ +|++.. ++|.|.|++||+ |..|+
T Consensus 1 ~~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 1 VSITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp CCEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred CccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCC
Confidence 378999762 246776 999865 699999999999 88994
No 96
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.80 E-value=4.4e-06 Score=77.75 Aligned_cols=47 Identities=34% Similarity=0.799 Sum_probs=41.9
Q ss_pred eeeeeEeeccccCCCCCCeeeEEeecceEEEecCCCcEEcCCCCcccc
Q psy8443 4 LRIRWFKFDECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 4 ~~~~C~dideC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
.+.+|.|||||.. +..|.+.|+|+.|+|+|.|++||++..++++|..
T Consensus 327 ~~~~C~dideC~~-~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 327 AQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKA 373 (699)
T ss_dssp SSSCCCCCCCCSS-SSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred CCCcccCccccCC-CCccccccccCCCCeeeeeecccccCCCCCcccc
Confidence 4778999999974 4679999999999999999999999999999953
No 97
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.72 E-value=5.2e-05 Score=54.74 Aligned_cols=38 Identities=37% Similarity=0.941 Sum_probs=31.9
Q ss_pred ee-EeeccccCCCCCCe--eeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 7 RW-FKFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 7 ~C-~dideC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+| .+++||... +|. .+|+|+.|+|+|.|++||+ |..|.
T Consensus 40 ~C~~~~~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~ 80 (135)
T 2vj3_A 40 RCEIDVNECVSN--PCQNDATCLDQIGEFQCICMPGYE----GVHCE 80 (135)
T ss_dssp TSCEECCTTTTC--CCCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred cccccCccCCCC--CCCCCCEEeCCCCCceeeCCCCCc----CCcce
Confidence 45 589999863 565 4999999999999999998 88884
No 98
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.69 E-value=2.3e-05 Score=57.30 Aligned_cols=40 Identities=28% Similarity=0.815 Sum_probs=33.1
Q ss_pred eeeeE-eeccccCCCCCCe--eeEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 5 RIRWF-KFDECALEDHGCE--HTCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 5 ~~~C~-dideC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+.+|. |||||... .|. .+|+|+.|+|+|.|++||+ |..|+
T Consensus 90 G~~C~~~i~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~~----G~~c~ 132 (143)
T 4d90_A 90 GIHCQHNINECEVE--PCKNGGICTDLVANYSCECPGEFM----GRNCQ 132 (143)
T ss_dssp STTSCEECCTTTTC--CSCTTCEEEEETTEEEEECCTTCB----STTSC
T ss_pred CCCcccCCCcCCCC--CCCCCCEeECCCCCeEeECCCCCc----cCCce
Confidence 34675 99999854 465 4999999999999999999 77884
No 99
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.67 E-value=2.2e-05 Score=71.97 Aligned_cols=41 Identities=34% Similarity=0.934 Sum_probs=38.6
Q ss_pred eeccccCCCCCCeeeEEeec-ceEEEecCCCcEEcCCCCccc
Q psy8443 10 KFDECALEDHGCEHTCKNIL-GGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 10 dideC~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~dg~~C~ 50 (330)
++|||...+++|.|.|.+++ |+|+|.|++||.|..|+++|.
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~ 305 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCS 305 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEE
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCc
Confidence 68999987889999999999 999999999999999999994
No 100
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.57 E-value=2.1e-05 Score=66.82 Aligned_cols=40 Identities=35% Similarity=0.904 Sum_probs=27.8
Q ss_pred cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
+|||. .++.|++.|.|+.|+|.|.|++||.|..++++|..
T Consensus 1 i~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 1 VNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKA 40 (349)
T ss_dssp ---------CCSSEECCC---CCEECCTTEEECTTSSCEEE
T ss_pred CcccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCcccc
Confidence 57898 67889999999999999999999999999999975
No 101
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.54 E-value=8.2e-05 Score=43.82 Aligned_cols=38 Identities=26% Similarity=0.518 Sum_probs=30.5
Q ss_pred cccCccccCCCcccccc-----cccCCceeeeccCCeEEccCCCCcc
Q psy8443 174 TDKDECMTNNGGCQHEC-----RNTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 174 ~~~~eC~~~~~~C~~~C-----~n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
.+++||..++...+++| ++..++|.|.|++||. |..|+
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 48899999988888889 5778899999999999 55564
No 102
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.52 E-value=4.6e-05 Score=56.97 Aligned_cols=41 Identities=37% Similarity=0.831 Sum_probs=35.1
Q ss_pred ccCccccCCCcc-cccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 175 DKDECMTNNGGC-QHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 175 ~~~eC~~~~~~C-~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
|+|||... .+| .++|+|+.|+|+|.|++||.+..+++.|.+
T Consensus 2 dideC~~~-~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d 43 (162)
T 1uzk_A 2 DVNECLDP-TTCISGNCVNTPGSYICDCPPDFELNPTRVGCVD 43 (162)
T ss_dssp CCCGGGST-TSSBTSEEEEETTEEEEECCTTCEECTTSSBEEC
T ss_pred ccccCCCC-CCCCCCEeECCCCCEEEeCCCCCeECCCCCcccC
Confidence 78999852 345 467999999999999999999999999975
No 103
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.51 E-value=2.1e-05 Score=63.08 Aligned_cols=41 Identities=32% Similarity=0.797 Sum_probs=32.8
Q ss_pred cccCccccCCCcccc--cccccCCceeeeccCCeEEccCCCCccc
Q psy8443 174 TDKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 174 ~~~~eC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
.|+|||..+.+.|.. .|.|+.|+|.|.|++||. .++..|.+
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d 45 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVA 45 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCC
Confidence 489999988888974 599999999999999998 67888876
No 104
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.51 E-value=5.1e-05 Score=62.41 Aligned_cols=48 Identities=40% Similarity=0.813 Sum_probs=41.3
Q ss_pred ccCccccC-CCcccccccccCCceeeeccCCeEEccCCCCcccC---CCcce
Q psy8443 175 DKDECMTN-NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKEG---GCKYE 222 (330)
Q Consensus 175 ~~~eC~~~-~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~~---~C~~~ 222 (330)
+.|||..+ ++.|.+.|.|+.++|.|.|..||.|..+++.|.+. .|+..
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~~ 52 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVL 52 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTCC
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccccCcc
Confidence 46899988 89999999999999999999999999999999862 56643
No 105
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.47 E-value=3.4e-05 Score=46.57 Aligned_cols=34 Identities=32% Similarity=0.771 Sum_probs=28.9
Q ss_pred ecccCccccCCCccc--ccccccCCceeeeccCCeE
Q psy8443 173 FTDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYT 206 (330)
Q Consensus 173 ~~~~~eC~~~~~~C~--~~C~n~~gsy~C~C~~G~~ 206 (330)
+.++|+|..++...+ ++|.++.++|.|.|++||.
T Consensus 8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCc
Confidence 457899998775555 5799999999999999998
No 106
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.46 E-value=5.3e-05 Score=63.42 Aligned_cols=42 Identities=31% Similarity=0.775 Sum_probs=37.4
Q ss_pred eeccccCCCCCCeeeEEeecc--eEEEecCCCcEEcCCCCcccc
Q psy8443 10 KFDECALEDHGCEHTCKNILG--GYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 10 dideC~~~~~~C~~~C~n~~g--sy~C~C~~G~~l~~dg~~C~~ 51 (330)
..++|...+++|.+.|.+.++ +|.|.|+.||.|..|+++|.+
T Consensus 266 ~~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 266 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp CCCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred cccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence 368998877899999999986 799999999999999999953
No 107
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.43 E-value=0.00011 Score=48.76 Aligned_cols=38 Identities=29% Similarity=0.786 Sum_probs=30.8
Q ss_pred ee--EeeccccCCCCCCee--eEEeec--ceEEEecCCCcEEcCCCCccc
Q psy8443 7 RW--FKFDECALEDHGCEH--TCKNIL--GGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 7 ~C--~dideC~~~~~~C~~--~C~n~~--gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.| .++|+|.. .+|.+ +|+++. ++|.|.|++||+ |+.|+
T Consensus 42 ~C~~~~~~~C~~--~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 42 QCHSVPVKSCSE--PRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp BCCEECEEECSS--CCSCTTCEEEEESSSSCEEEECCTTCB----SSSCC
T ss_pred ccccCcCCcccC--CCCCCCCEeecCCCCCCeEeECCCCCc----CCcCC
Confidence 56 37899986 45765 899988 899999999998 88884
No 108
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.43 E-value=0.00013 Score=41.24 Aligned_cols=35 Identities=31% Similarity=0.677 Sum_probs=27.2
Q ss_pred ccccCC-CCCCee--eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443 12 DECALE-DHGCEH--TCK--NILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 12 deC~~~-~~~C~~--~C~--n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+||... ..+|.+ +|+ +..++|.|.|++||+ |..|+
T Consensus 1 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 1 PGXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CCCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CCcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 366642 236765 898 778999999999999 88994
No 109
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.29 E-value=5.1e-06 Score=66.25 Aligned_cols=35 Identities=6% Similarity=-0.047 Sum_probs=25.9
Q ss_pred cccCccccCCCcccccccccCCceeeeccCCeEEc
Q psy8443 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL 208 (330)
Q Consensus 174 ~~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~ 208 (330)
.+.+||...+..-..+|++...+|+|.|+.||+..
T Consensus 97 ~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~ 131 (267)
T 4fbr_A 97 KQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSE 131 (267)
T ss_dssp SCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred ccccccCCCCCCCCCEEecCCccEEeeCCCCcccc
Confidence 34557777665556778888888888888888853
No 110
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.25 E-value=0.00022 Score=41.89 Aligned_cols=37 Identities=32% Similarity=0.897 Sum_probs=28.2
Q ss_pred ccCccccC-CCcc--ccccc--ccCCceeeeccCCeEEccCCCCcc
Q psy8443 175 DKDECMTN-NGGC--QHECR--NTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 175 ~~~eC~~~-~~~C--~~~C~--n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
++++|..+ ..+| .++|+ +..++|.|.|++||. |..|+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCC
Confidence 57888875 2345 45799 899999999999997 55664
No 111
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.09 E-value=0.00027 Score=43.21 Aligned_cols=34 Identities=26% Similarity=0.559 Sum_probs=27.6
Q ss_pred eccccCCCCCCee--eEEe-----ecceEEEecCCCcEEcCCCCccc
Q psy8443 11 FDECALEDHGCEH--TCKN-----ILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 11 ideC~~~~~~C~~--~C~n-----~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
-|+|.. .+|.+ +|++ ..++|.|.|++||+ |..|+
T Consensus 6 c~~C~~--~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 6 CAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT 46 (63)
T ss_dssp CCHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred cCCCCC--CcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence 367865 45765 9997 57899999999999 89994
No 112
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.90 E-value=0.00052 Score=40.12 Aligned_cols=35 Identities=43% Similarity=1.023 Sum_probs=26.5
Q ss_pred ccccCC-CCCCee--eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443 12 DECALE-DHGCEH--TCK--NILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 12 deC~~~-~~~C~~--~C~--n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.+|... ..+|.+ +|+ +..++|.|.|++||+ |..|+
T Consensus 4 ~~C~~~~~~pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 4 SECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp EECCSTTCCEECTTCEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred cccCCCCCCCCCCCeEEeeecCCCCEEEecCCCCc----CCCCC
Confidence 345432 346765 898 667899999999999 99994
No 113
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.89 E-value=0.0029 Score=58.08 Aligned_cols=43 Identities=30% Similarity=0.815 Sum_probs=40.0
Q ss_pred ccCccccCCCcccccccccC-CceeeeccCCeEEccCCCCcccC
Q psy8443 175 DKDECMTNNGGCQHECRNTI-GSYICSCHNGYTLLENGHDCKEG 217 (330)
Q Consensus 175 ~~~eC~~~~~~C~~~C~n~~-gsy~C~C~~G~~l~~~~~~C~~~ 217 (330)
..++|..+++.|++.|.++. ++|.|.|+.||.|..++++|...
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECC
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccc
Confidence 67999999999999999999 99999999999999999999864
No 114
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.83 E-value=0.0013 Score=37.03 Aligned_cols=34 Identities=24% Similarity=0.516 Sum_probs=23.9
Q ss_pred ccccC---CCccccccc--ccCCceeeeccCCeEEccCCCCcc
Q psy8443 178 ECMTN---NGGCQHECR--NTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 178 eC~~~---~~~C~~~C~--n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
+|..+ +....++|+ +..++|.|.|++||. |..|+
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 45543 333345687 788999999999998 55564
No 115
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.81 E-value=0.00059 Score=57.02 Aligned_cols=41 Identities=29% Similarity=0.686 Sum_probs=36.6
Q ss_pred ccCccccC---CCcccccccccC------CceeeeccCCeEEccCCCCcc
Q psy8443 175 DKDECMTN---NGGCQHECRNTI------GSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 175 ~~~eC~~~---~~~C~~~C~n~~------gsy~C~C~~G~~l~~~~~~C~ 215 (330)
..++|..+ ++.|++.|.++. ++|.|.|+.||.|..|+++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 56889987 888999999875 689999999999999999995
No 116
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.74 E-value=0.00065 Score=56.77 Aligned_cols=43 Identities=44% Similarity=0.970 Sum_probs=37.5
Q ss_pred cCccccCCCcccccccccCC--ceeeeccCCeEEccCCCCcccCC
Q psy8443 176 KDECMTNNGGCQHECRNTIG--SYICSCHNGYTLLENGHDCKEGG 218 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n~~g--sy~C~C~~G~~l~~~~~~C~~~~ 218 (330)
.++|..+++.|++.|....+ +|.|.|+.||.|..+++.|.+..
T Consensus 267 ~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~ 311 (318)
T 3sov_A 267 TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGN 311 (318)
T ss_dssp CCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred ccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence 58898888999999998876 79999999999999999998643
No 117
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.61 E-value=0.00096 Score=37.67 Aligned_cols=36 Identities=25% Similarity=0.609 Sum_probs=25.6
Q ss_pred ccCcccc---CCCcccccccccC--CceeeeccCCeEEccCCCCcc
Q psy8443 175 DKDECMT---NNGGCQHECRNTI--GSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 175 ~~~eC~~---~~~~C~~~C~n~~--gsy~C~C~~G~~l~~~~~~C~ 215 (330)
++++|.. ++... ++|.+.. ++|.|.|++||+ |..|+
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCc----cCCCC
Confidence 4677876 44333 4788644 789999999998 55564
No 118
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.60 E-value=0.0015 Score=48.60 Aligned_cols=40 Identities=28% Similarity=0.635 Sum_probs=29.7
Q ss_pred eccccCCCCCCee--eEEeecceEEEecCCCcEEcCCCCccccccccccCCC
Q psy8443 11 FDECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICVGSVKARDACG 60 (330)
Q Consensus 11 ideC~~~~~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~~~~~~~~~C~ 60 (330)
.++|.. .+|.+ +|.+..++|+|.|++||+ |..|+. .++|.
T Consensus 119 ~~~c~~--~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~----~~~c~ 160 (162)
T 1g1s_A 119 TASCQD--MSCSKQGECLETIGNYTCSCYPGFY----GPECEY----VRDDD 160 (162)
T ss_dssp ECCCCT--TGGGGSEEEEECSSSEEEEECTTEE----STTSCE----ECC--
T ss_pred eCCCcC--CCCCCCCEEecCCCCceEeCCCCCc----Cccccc----CcccC
Confidence 456664 45754 999999999999999999 889943 44564
No 119
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.58 E-value=0.00089 Score=61.35 Aligned_cols=42 Identities=29% Similarity=0.739 Sum_probs=38.5
Q ss_pred ccCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 175 ~~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
..++|..+++.|++.|.++.++|.|.|+.||.|..++++|..
T Consensus 577 ~~~~C~~~ng~C~~~C~~~~~~~~C~C~~g~~l~~d~~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCSHLCLYRPQGLRCACPIGFELISDMKTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCSSEEEEETTEEEEECCTTCEECSSTTCEEC
T ss_pred ccccCCCCCCChhHhhccCCCCeEEECCCCCEECCCCCcCCC
Confidence 468899889999999999999999999999999999999963
No 120
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.49 E-value=0.0012 Score=60.48 Aligned_cols=42 Identities=31% Similarity=0.789 Sum_probs=37.2
Q ss_pred eeccccCCCCCCeeeEEeec--ceEEEecCCCcEEcCCCCcccc
Q psy8443 10 KFDECALEDHGCEHTCKNIL--GGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 10 dideC~~~~~~C~~~C~n~~--gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
..++|...+++|.|.|.+.+ ++|+|.|++||.|..|+++|..
T Consensus 271 ~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~ 314 (619)
T 3s94_A 271 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKD 314 (619)
T ss_dssp CCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCS
T ss_pred ccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCC
Confidence 46899887789999999987 4799999999999999999953
No 121
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=96.29 E-value=0.0024 Score=58.59 Aligned_cols=52 Identities=25% Similarity=0.694 Sum_probs=39.0
Q ss_pred CCCCcccCceEEEec---ccCccccCC-Ccccc--cccccCCceeeec-cCCeEEccCCCCccc-CCC
Q psy8443 160 DNSVQKSGFSAFFFT---DKDECMTNN-GGCQH--ECRNTIGSYICSC-HNGYTLLENGHDCKE-GGC 219 (330)
Q Consensus 160 ~~~~~~~Gf~~~~~~---~~~eC~~~~-~~C~~--~C~n~~gsy~C~C-~~G~~l~~~~~~C~~-~~C 219 (330)
..+.+..||.+..|. ++++|...+ ..|.+ +|.+ ..|.| ++||. |..|+. ..|
T Consensus 545 g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~----G~~Ce~C~~C 604 (690)
T 3fcs_B 545 GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSY----GDTCEKCPTC 604 (690)
T ss_dssp TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCB----STTSCBCTTS
T ss_pred CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCcc----CCCcCcCCCC
Confidence 667788999988876 578888644 45653 5865 29999 99998 999986 455
No 122
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.21 E-value=0.0025 Score=38.85 Aligned_cols=37 Identities=27% Similarity=0.517 Sum_probs=27.9
Q ss_pred ccCccccCCCcccccccc-----cCCceeeeccCCeEEccCCCCcc
Q psy8443 175 DKDECMTNNGGCQHECRN-----TIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 175 ~~~eC~~~~~~C~~~C~n-----~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
.-++|..++...+++|++ ..++|.|.|++||. |..|+
T Consensus 5 ~c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 5 KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCT 46 (63)
T ss_dssp ECCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred ccCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence 346777666555667986 67899999999998 55664
No 123
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.11 E-value=0.0045 Score=35.96 Aligned_cols=27 Identities=37% Similarity=0.846 Sum_probs=22.0
Q ss_pred CCee--eEEe----ecceEEEecCCCcEEcCCCCccc
Q psy8443 20 GCEH--TCKN----ILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 20 ~C~~--~C~n----~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+|.+ +|++ ..++|.|.|++||+ |..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 4654 8987 36789999999999 88994
No 124
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.34 E-value=0.0098 Score=53.25 Aligned_cols=34 Identities=35% Similarity=0.971 Sum_probs=29.8
Q ss_pred eccccCCCCCCee--eEEe-ecceEEEecC-CCcEEcCCCCccc
Q psy8443 11 FDECALEDHGCEH--TCKN-ILGGYECSCK-IGYELHSDGKICV 50 (330)
Q Consensus 11 ideC~~~~~~C~~--~C~n-~~gsy~C~C~-~G~~l~~dg~~C~ 50 (330)
+|+|.. .+|.+ +|++ ..++|.|.|+ +||+ |..|+
T Consensus 2 ~d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 2 VNPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp CCGGGG--CCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred CCcCCC--CCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence 689986 46775 9999 8999999999 9999 99995
No 125
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=95.27 E-value=0.0057 Score=50.97 Aligned_cols=34 Identities=29% Similarity=0.829 Sum_probs=22.3
Q ss_pred eeccccCCC--CCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 10 KFDECALED--HGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 10 dideC~~~~--~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.+++|.... ..|.+ .|.+ .|.|.|++||. |..|.
T Consensus 142 ~~~~C~~~~C~~~C~~~G~C~~---~~~C~C~~G~~----G~~C~ 179 (324)
T 2ygq_A 142 FFKTCQQAECPGGCRNGGFCNE---RRICECPDGFH----GPHCE 179 (324)
T ss_dssp EEEEECCCCCSSCCCSSCEECT---TSCEECCTTEE----SSSSC
T ss_pred ccccccCCCCCCCCCCCCEECC---CCeEECCCCCc----CCCCC
Confidence 345554321 24543 6754 58999999999 78885
No 126
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.96 E-value=0.02 Score=34.01 Aligned_cols=27 Identities=37% Similarity=0.846 Sum_probs=21.4
Q ss_pred CCee--eEEe----ecceEEEecCCCcEEcCCCCccc
Q psy8443 20 GCEH--TCKN----ILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 20 ~C~~--~C~n----~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.|.+ +|.. ..++|.|.|++||+ |..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence 4554 8883 45689999999999 99994
No 127
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.96 E-value=0.019 Score=51.59 Aligned_cols=34 Identities=26% Similarity=0.903 Sum_probs=28.5
Q ss_pred eccccCCCCCCee--eEEee-cceEEEecC-CCcEEcCCCCccc
Q psy8443 11 FDECALEDHGCEH--TCKNI-LGGYECSCK-IGYELHSDGKICV 50 (330)
Q Consensus 11 ideC~~~~~~C~~--~C~n~-~gsy~C~C~-~G~~l~~dg~~C~ 50 (330)
||+|.. .+|.+ +|++. .++|.|.|+ +||+ |+.|+
T Consensus 1 vd~C~s--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 38 (587)
T 3nt1_A 1 ANPCCS--NPCQNRGECMSTGFDQYKCDCTRTGFY----GENCT 38 (587)
T ss_dssp CCTTTT--CCCCTTCEEEEEETTEEEEECTTSSEE----TTTTC
T ss_pred CCCCCC--CCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCC
Confidence 589986 46765 99964 599999999 9999 99995
No 128
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=94.46 E-value=0.0073 Score=45.18 Aligned_cols=46 Identities=28% Similarity=0.601 Sum_probs=35.3
Q ss_pred CCCCcccCceEEEec-ccCccccCCCccc--cccccc-CCceeeeccCCeE
Q psy8443 160 DNSVQKSGFSAFFFT-DKDECMTNNGGCQ--HECRNT-IGSYICSCHNGYT 206 (330)
Q Consensus 160 ~~~~~~~Gf~~~~~~-~~~eC~~~~~~C~--~~C~n~-~gsy~C~C~~G~~ 206 (330)
.......||.+..+. ++++|.. ..+|. ++|+++ .++|.|.|++||.
T Consensus 114 ~~C~C~~G~~G~~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 114 WQCLCETNWGGQLCDKDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGYS 163 (169)
T ss_dssp TCCEECTTEETTTTCEESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTCC
T ss_pred CEEeCCCCCCCCcccCCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCCc
Confidence 345567888877776 7889986 23454 569997 8999999999998
No 129
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.09 E-value=0.028 Score=41.58 Aligned_cols=37 Identities=38% Similarity=0.821 Sum_probs=28.0
Q ss_pred cCccccCCCcccccccccCCceeeeccCCeEEccCCCCccc
Q psy8443 176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
.++|...+....++|.++.++|.|.|++||. |..|+.
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~ 155 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFY----GPECEY 155 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEE----STTSCE
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCc----Cccccc
Confidence 4567665544456799999999999999999 556653
No 130
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=93.96 E-value=0.036 Score=46.13 Aligned_cols=44 Identities=25% Similarity=0.736 Sum_probs=0.0
Q ss_pred CCCcccCceEEEecccCccccCCCccc--ccccccCCceeeeccCCeEEccCCCCcc
Q psy8443 161 NSVQKSGFSAFFFTDKDECMTNNGGCQ--HECRNTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 161 ~~~~~~Gf~~~~~~~~~eC~~~~~~C~--~~C~n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
.+.+..||.+..|. .++|. ..|. ++|.+ .+.|.|++||. |..|+
T Consensus 262 ~C~C~~G~~G~~C~-~~~C~---~~C~~~g~C~~---~~~C~C~~G~~----G~~C~ 307 (324)
T 2ygq_A 262 KCKCSKGYQGDLCS-KPVCE---PGCGAHGTCHE---PNKCQCQEGWH----GRHCN 307 (324)
T ss_dssp ---------------------------------------------------------
T ss_pred EEECCCCCcCCCCc-CCCCC---CCCCCCCEECC---CCEeECCCCCc----CCCCC
Confidence 45677888887775 45665 2343 45775 58999999998 44554
No 131
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=93.44 E-value=0.059 Score=31.26 Aligned_cols=24 Identities=33% Similarity=0.988 Sum_probs=19.5
Q ss_pred cccc--ccCCceeeeccCCeEEccCCCCcc
Q psy8443 188 HECR--NTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 188 ~~C~--n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
++|. +..++|.|.|++||. |..|+
T Consensus 18 G~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 18 GVCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp CEEEEETTTTEEEEEECTTEE----STTSC
T ss_pred eEEeeecCCCCEEEecCCCCc----CCCCC
Confidence 4687 778899999999999 55554
No 132
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.34 E-value=0.11 Score=38.43 Aligned_cols=28 Identities=36% Similarity=1.060 Sum_probs=24.3
Q ss_pred CCCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 19 HGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 19 ~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
..|.. .|.+..++|.|.|++||. |..|.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~ 154 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYY----GPQCQ 154 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCB----SSSSC
T ss_pred CcCCCCCeecccCCCceeeeCCCcc----ccccc
Confidence 46753 999999999999999998 88894
No 133
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=92.89 E-value=0.1 Score=47.97 Aligned_cols=31 Identities=32% Similarity=0.756 Sum_probs=23.0
Q ss_pred ccccCCC--CCCee--eEEeecceEEEecC----CCcEEcCCCCccc
Q psy8443 12 DECALED--HGCEH--TCKNILGGYECSCK----IGYELHSDGKICV 50 (330)
Q Consensus 12 deC~~~~--~~C~~--~C~n~~gsy~C~C~----~G~~l~~dg~~C~ 50 (330)
++|...+ ..|.+ .|.+ ++|.|+ +||. |..|+
T Consensus 484 ~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~----G~~Ce 522 (690)
T 3fcs_B 484 DECSPREGQPVCSQRGECLC----GQCVCHSSDFGKIT----GKYCE 522 (690)
T ss_dssp CCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCB----STTSC
T ss_pred CcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCee----CCCcC
Confidence 6787533 24764 8874 689999 9998 88894
No 134
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=92.55 E-value=0.17 Score=43.84 Aligned_cols=21 Identities=33% Similarity=0.971 Sum_probs=15.2
Q ss_pred cccccCCceeeeccCCeEEccCCCCccc
Q psy8443 189 ECRNTIGSYICSCHNGYTLLENGHDCKE 216 (330)
Q Consensus 189 ~C~n~~gsy~C~C~~G~~l~~~~~~C~~ 216 (330)
.|.+..+ |.|++||. |..|+.
T Consensus 300 ~C~~~~~---C~C~~G~~----G~~Ce~ 320 (423)
T 2gy5_A 300 MCDRFQG---CLCSPGWQ----GLQCER 320 (423)
T ss_dssp EEETTTE---EECCTTCB----STTSCB
T ss_pred EecCCCc---eECCCCCc----CCCCcc
Confidence 5766644 99999998 556654
No 135
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=92.27 E-value=0.087 Score=47.19 Aligned_cols=37 Identities=27% Similarity=0.669 Sum_probs=31.4
Q ss_pred cCccccCCCcccccccc-cCCceeeecc-CCeEEccCCCCccc
Q psy8443 176 KDECMTNNGGCQHECRN-TIGSYICSCH-NGYTLLENGHDCKE 216 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n-~~gsy~C~C~-~G~~l~~~~~~C~~ 216 (330)
+|+|..+++..+++|.+ ..++|.|.|+ .||. |..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence 57899888776778999 8999999999 9999 667754
No 136
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.83 E-value=0.093 Score=33.03 Aligned_cols=36 Identities=36% Similarity=0.768 Sum_probs=24.8
Q ss_pred eccccCC-CCCCee-eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443 11 FDECALE-DHGCEH-TCK--NILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 11 ideC~~~-~~~C~~-~C~--n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.++|... .+.|.+ +|. +..+.+.|.|++||+ |..|+
T Consensus 37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYH----GERCH 76 (79)
T ss_dssp --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEE----STTCC
T ss_pred CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcc----ccccc
Confidence 4567622 346766 895 334689999999999 88883
No 137
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=90.84 E-value=0.18 Score=28.69 Aligned_cols=37 Identities=35% Similarity=0.740 Sum_probs=26.4
Q ss_pred eeccccCC-CCCCee-eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443 10 KFDECALE-DHGCEH-TCK--NILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 10 dideC~~~-~~~C~~-~C~--n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
..++|... ...|.+ +|. ...+.+.|.|++||+ |..|+
T Consensus 8 ~~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~----G~RCe 48 (50)
T 2rnl_A 8 KKNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYF----GERCG 48 (50)
T ss_dssp CCCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCC----SSSCC
T ss_pred cCcccCchhhCcCCCCEEEEecCCCCeeEECCCCcc----ccccc
Confidence 34567632 245766 887 445689999999999 88883
No 138
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.69 E-value=0.16 Score=28.90 Aligned_cols=28 Identities=32% Similarity=0.708 Sum_probs=21.7
Q ss_pred CCCee-eEE--eecceEEEecCCCcEEcCCCCccc
Q psy8443 19 HGCEH-TCK--NILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 19 ~~C~~-~C~--n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+.|-+ +|. ...+.+.|.|++||+ |..|+
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe 44 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGYI----GARCE 44 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTEE----TTTTC
T ss_pred CcccCCEEEeEcCCCCeEEECCCCcc----cCCCC
Confidence 34554 775 446789999999999 99994
No 139
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=90.60 E-value=0.15 Score=29.29 Aligned_cols=25 Identities=28% Similarity=0.874 Sum_probs=18.8
Q ss_pred cccccc----cCCceeeeccCCeEEccCCCCcc
Q psy8443 187 QHECRN----TIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 187 ~~~C~n----~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
+++|++ ..++|.|.|++||. |..|+
T Consensus 19 GGtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 19 DAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp TCEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred CCEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 346875 46789999999999 55554
No 140
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.54 E-value=0.04 Score=48.43 Aligned_cols=10 Identities=40% Similarity=1.062 Sum_probs=0.0
Q ss_pred eeeeccCCeE
Q psy8443 197 YICSCHNGYT 206 (330)
Q Consensus 197 y~C~C~~G~~ 206 (330)
+.|.|++||.
T Consensus 440 ~~C~C~~G~~ 449 (463)
T 2wg3_C 440 NKCLCKKGYL 449 (463)
T ss_dssp ----------
T ss_pred CEEECCCCcc
Confidence 5777777776
No 141
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=90.37 E-value=0.17 Score=45.56 Aligned_cols=37 Identities=27% Similarity=0.775 Sum_probs=30.1
Q ss_pred cCccccCCCcccccccc-cCCceeeecc-CCeEEccCCCCccc
Q psy8443 176 KDECMTNNGGCQHECRN-TIGSYICSCH-NGYTLLENGHDCKE 216 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n-~~gsy~C~C~-~G~~l~~~~~~C~~ 216 (330)
+++|..+++..+++|.+ ..++|.|.|+ +||. |..|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 47898887777788996 5689999999 9998 777764
No 142
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=90.33 E-value=0.23 Score=28.24 Aligned_cols=28 Identities=36% Similarity=0.783 Sum_probs=22.2
Q ss_pred CCCee-eEEee--cceEEEecCCCcEEcCCCCccc
Q psy8443 19 HGCEH-TCKNI--LGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 19 ~~C~~-~C~n~--~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+.|.+ +|.-. .+.+.|.|++||+ |..|+
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~----G~RCe 44 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGYV----GARCE 44 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCCc----ccCCC
Confidence 45765 88764 3679999999999 88994
No 143
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=89.07 E-value=0.26 Score=32.67 Aligned_cols=47 Identities=19% Similarity=0.379 Sum_probs=36.6
Q ss_pred ceeeeeEeecc-ccCCCCCCee--eEEeec-ceEEEecCCCcE-EcCCCCcc
Q psy8443 3 KLRIRWFKFDE-CALEDHGCEH--TCKNIL-GGYECSCKIGYE-LHSDGKIC 49 (330)
Q Consensus 3 ~~~~~C~dide-C~~~~~~C~~--~C~n~~-gsy~C~C~~G~~-l~~dg~~C 49 (330)
+++..|..++. |+.++++|+. .|..+. .--.|.|.+||. .--+|..|
T Consensus 42 ~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC 93 (105)
T 1n1i_A 42 EVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFC 93 (105)
T ss_dssp ECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEE
T ss_pred ccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEE
Confidence 57788999999 8888889986 999985 788999999975 11245555
No 144
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=87.66 E-value=0.27 Score=32.35 Aligned_cols=47 Identities=19% Similarity=0.410 Sum_probs=35.6
Q ss_pred ceeeeeEee--ccccCCCCCCee--eEEeec-----ceEEEecCCCcE-EcCCCCcc
Q psy8443 3 KLRIRWFKF--DECALEDHGCEH--TCKNIL-----GGYECSCKIGYE-LHSDGKIC 49 (330)
Q Consensus 3 ~~~~~C~di--deC~~~~~~C~~--~C~n~~-----gsy~C~C~~G~~-l~~dg~~C 49 (330)
++++.|..+ +.|+..+++|+. .|..+. +...|.|.+||. ...+|.-|
T Consensus 36 gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~~~gvf~ 92 (99)
T 1ob1_C 36 QEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPLFDGIFC 92 (99)
T ss_dssp EETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEEGGGTEE
T ss_pred cCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccceeEEEe
Confidence 577889888 589988889986 999885 678999999985 22344444
No 145
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=86.79 E-value=0.32 Score=28.72 Aligned_cols=25 Identities=28% Similarity=0.889 Sum_probs=18.5
Q ss_pred ccccc--c--cCCceeeeccCCeEEccCCCCcc
Q psy8443 187 QHECR--N--TIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 187 ~~~C~--n--~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
+++|. . ..++|.|.|++||. |..|+
T Consensus 19 GGtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce 47 (58)
T 3ltf_D 19 DAHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (58)
T ss_dssp SCEEEEEEETTEEEEEEEECTTEE----SSSSC
T ss_pred CCEEeCCccCCCCCEEeECCCCCc----cCCCc
Confidence 34676 3 45689999999999 56664
No 146
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=86.57 E-value=0.45 Score=33.09 Aligned_cols=27 Identities=26% Similarity=0.667 Sum_probs=21.3
Q ss_pred CCee--eEEeec--ceE-EEecCCCcEEcCCCCccc
Q psy8443 20 GCEH--TCKNIL--GGY-ECSCKIGYELHSDGKICV 50 (330)
Q Consensus 20 ~C~~--~C~n~~--gsy-~C~C~~G~~l~~dg~~C~ 50 (330)
+|.+ +|++.. .+| .|.|++||+ |..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~----G~~Ce 33 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE 33 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEE----STTSC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCC----Ccccc
Confidence 3543 899884 555 999999999 89994
No 147
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=82.02 E-value=6.4 Score=33.71 Aligned_cols=37 Identities=19% Similarity=0.596 Sum_probs=28.5
Q ss_pred cCccccCCCcccccccccCCceeeeccC-CeEEccCCCCccc
Q psy8443 176 KDECMTNNGGCQHECRNTIGSYICSCHN-GYTLLENGHDCKE 216 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~-G~~l~~~~~~C~~ 216 (330)
.+.|...++...++|.+..++|.|.|+. ||. +..|..
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~ 222 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 222 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence 3567766655567799999999999996 997 666754
No 148
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=81.87 E-value=1.1 Score=38.61 Aligned_cols=38 Identities=21% Similarity=0.721 Sum_probs=29.8
Q ss_pred eeE-eeccccCCCCCCee--eEEeecceEEEecCC-CcEEcCCCCccc
Q psy8443 7 RWF-KFDECALEDHGCEH--TCKNILGGYECSCKI-GYELHSDGKICV 50 (330)
Q Consensus 7 ~C~-dideC~~~~~~C~~--~C~n~~gsy~C~C~~-G~~l~~dg~~C~ 50 (330)
.|. ..++|.. .+|.+ .|++..++|.|.|+. ||. |..|.
T Consensus 180 gC~~~~~~C~~--~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~ 221 (410)
T 3asi_A 180 GCEGPSTTCQE--DSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCN 221 (410)
T ss_dssp SCCCCSSCCCT--TSSSTTCEEEECSSSEEEECTTTSEE----STTSC
T ss_pred CCCCCCCCccc--ccCCCCCEecCCCCCceEeccCCccc----CCCCC
Confidence 353 3467765 46765 999999999999996 998 89994
No 149
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=81.15 E-value=0.92 Score=33.25 Aligned_cols=34 Identities=32% Similarity=0.825 Sum_probs=25.0
Q ss_pred ccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443 178 ECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 178 eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
.|..+...-.++|.+..++|.|.|++||. |..|+
T Consensus 121 ~~~~~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~ 154 (164)
T 3cfw_A 121 SCQPWSCSGHGECVEIINNYTCNCDVGYY----GPQCQ 154 (164)
T ss_dssp CCCTTSSCSSEEEEEETTEEEEEECTTCB----SSSSC
T ss_pred CCCCCcCCCCCeecccCCCceeeeCCCcc----ccccc
Confidence 35443333345799999999999999998 55665
No 150
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=80.87 E-value=0.97 Score=41.58 Aligned_cols=30 Identities=27% Similarity=0.693 Sum_probs=20.8
Q ss_pred cccCCC--CCCee--eEEeecceEEEecC------CCcEEcCCCCccc
Q psy8443 13 ECALED--HGCEH--TCKNILGGYECSCK------IGYELHSDGKICV 50 (330)
Q Consensus 13 eC~~~~--~~C~~--~C~n~~gsy~C~C~------~G~~l~~dg~~C~ 50 (330)
+|...+ ..|.+ .|.+ | +|.|+ +||. |..|.
T Consensus 474 ~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~G~~----G~~Ce 513 (687)
T 3k6s_B 474 SCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGKLIY----GQYCE 513 (687)
T ss_dssp TTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTCCEE----STTSC
T ss_pred CCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCCCcc----ccccc
Confidence 465432 23754 8873 3 89999 9999 88894
No 151
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=79.48 E-value=2.2 Score=36.61 Aligned_cols=23 Identities=22% Similarity=0.462 Sum_probs=20.6
Q ss_pred eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 24 TCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 24 ~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.|....|++.|.|+.|++ |..|+
T Consensus 305 ~C~~~~g~~~C~C~~~tt----G~~CE 327 (426)
T 3zyj_B 305 VCVYDNSKLTCECEHNTT----GPDCG 327 (426)
T ss_dssp CEEEETTEEEECCCTTEE----SSSSC
T ss_pred hcCCCCCCceeeCCCCCc----CCCcc
Confidence 798888999999999999 88883
No 152
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=79.18 E-value=1.1 Score=32.46 Aligned_cols=36 Identities=31% Similarity=0.847 Sum_probs=25.5
Q ss_pred cCccccCCCcccccccccCCceeeeccCCeEEccCCCCcc
Q psy8443 176 KDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 176 ~~eC~~~~~~C~~~C~n~~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
..+|...+..-.+.|.+..++|.|.|.+||. |..|+
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCcc----Ccccc
Confidence 3455543322235799999999999999999 55553
No 153
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=78.01 E-value=2.2 Score=37.63 Aligned_cols=39 Identities=23% Similarity=0.604 Sum_probs=30.9
Q ss_pred eeccccCCC-CCCee--eEEee-cceEEEecCCCcEEcCCCCccc
Q psy8443 10 KFDECALED-HGCEH--TCKNI-LGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 10 dideC~~~~-~~C~~--~C~n~-~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.++.|.... +.|.. .|+++ .|.|.|.|+.||. ++|..|.
T Consensus 17 ~~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~a--g~G~~c~ 59 (551)
T 3fby_A 17 AQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWA--GNGILCG 59 (551)
T ss_dssp BCCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEE--SSSSSCE
T ss_pred ccccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCC--CCCcccC
Confidence 466787654 57875 89988 5789999999998 7888884
No 154
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=66.21 E-value=3.8 Score=26.94 Aligned_cols=26 Identities=31% Similarity=0.712 Sum_probs=22.3
Q ss_pred eEEee-cceEEEecCCCcEEcCCCCcccc
Q psy8443 24 TCKNI-LGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 24 ~C~n~-~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
.|.+. +|...|.|.+||. +||..|+.
T Consensus 17 ~C~r~~~g~e~C~C~~gy~--gdg~~Cv~ 43 (99)
T 1ob1_C 17 GCFRHLDEREECKCLLNYK--QEGDKCVE 43 (99)
T ss_dssp EEECCTTSCCEEEECTTEE--EETTEEEE
T ss_pred CeEEcCCCCEEEEecCCee--cCCCeEee
Confidence 78884 7999999999998 67889963
No 155
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=63.37 E-value=7.3 Score=25.83 Aligned_cols=26 Identities=31% Similarity=0.685 Sum_probs=22.8
Q ss_pred eEEe-ecceEEEecCCCcEEcCCCCcccc
Q psy8443 24 TCKN-ILGGYECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 24 ~C~n-~~gsy~C~C~~G~~l~~dg~~C~~ 51 (330)
.|.. .+|.-+|.|..||. +||..|+.
T Consensus 23 ~C~r~~~G~e~CrCl~gY~--~dg~~Cv~ 49 (105)
T 1n1i_A 23 ACYRYLDGTEEWRCLLGFK--EVGGKCVP 49 (105)
T ss_dssp EEEECTTSCEEEEECTTEE--ECSSSEEE
T ss_pred CeEECCCCCEeEEEECCee--ccCCEEEE
Confidence 7888 68999999999999 68999963
No 156
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=60.09 E-value=6.8 Score=39.14 Aligned_cols=34 Identities=24% Similarity=0.839 Sum_probs=28.2
Q ss_pred eccccCCCCCCee--eEEeecceEEEecC-CCcEEcCCCCccc
Q psy8443 11 FDECALEDHGCEH--TCKNILGGYECSCK-IGYELHSDGKICV 50 (330)
Q Consensus 11 ideC~~~~~~C~~--~C~n~~gsy~C~C~-~G~~l~~dg~~C~ 50 (330)
.+.|.. .+|.+ +|.....+|.|.|+ +||. |..|.
T Consensus 1017 ~~~C~~--~pC~ngG~C~~~~~~~~C~C~~~g~~----G~~C~ 1053 (1245)
T 3qcw_A 1017 STTCQE--DSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCN 1053 (1245)
T ss_dssp CCCCCT--TSSSSSCEEEEETTEEEEECTTSSCB----STTSC
T ss_pred cCceEC--CcCCCCCEeCCCCCCCEEECCCCCCC----CCCcc
Confidence 367765 46765 99999999999999 6998 99994
No 157
>1e0f_I Haemadin, factor IIA; coagulation//heparin-B, coagulation/crystal structure/heparin-binding site/ hirudin/thrombin inhibitor; 3.1A {Haemadipsa sylvestris} SCOP: g.3.15.2
Probab=58.80 E-value=9.6 Score=20.56 Aligned_cols=31 Identities=29% Similarity=0.830 Sum_probs=22.2
Q ss_pred ccccCCceeeeccCCeEEccCCCCcccCCCcce
Q psy8443 190 CRNTIGSYICSCHNGYTLLENGHDCKEGGCKYE 222 (330)
Q Consensus 190 C~n~~gsy~C~C~~G~~l~~~~~~C~~~~C~~~ 222 (330)
|.+..-+|+|.|.....|- +.+|.+..|.+.
T Consensus 10 cpdgevgytcdcgekicly--gqscndgqcsgd 40 (57)
T 1e0f_I 10 CPDGEVGYTCDCGEKICLY--GQSCNDGQCSGD 40 (57)
T ss_dssp CCSSSCSSCEECSSSEECT--TCCBSSSCBCSC
T ss_pred CCCCceeeeccCCceeeEe--cccccCCcccCC
Confidence 5566778999988876654 677877777554
No 158
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=57.58 E-value=7 Score=27.94 Aligned_cols=27 Identities=26% Similarity=0.717 Sum_probs=21.1
Q ss_pred CCee--eEEee--cceE-EEecCCCcEEcCCCCccc
Q psy8443 20 GCEH--TCKNI--LGGY-ECSCKIGYELHSDGKICV 50 (330)
Q Consensus 20 ~C~~--~C~n~--~gsy-~C~C~~G~~l~~dg~~C~ 50 (330)
+|.+ +|++. ...| .|.|++||. |..|+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~----G~~Ce 45 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFG----GQHCE 45 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEE----STTSC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCC----CCcee
Confidence 5654 89776 3566 899999999 89994
No 159
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=55.52 E-value=9 Score=38.27 Aligned_cols=34 Identities=29% Similarity=0.853 Sum_probs=28.1
Q ss_pred eccccCCCCCCee--eEEeecceEEEecC-CCcEEcCCCCccc
Q psy8443 11 FDECALEDHGCEH--TCKNILGGYECSCK-IGYELHSDGKICV 50 (330)
Q Consensus 11 ideC~~~~~~C~~--~C~n~~gsy~C~C~-~G~~l~~dg~~C~ 50 (330)
.+.|.. .+|.+ .|.+..++|.|.|+ +||. |..|.
T Consensus 619 ~~~C~~--~pC~ngg~C~~~~~~~~C~C~~~g~~----G~~C~ 655 (1245)
T 3qcw_A 619 AKPCLS--NPCKNNGMCRDGWNRYVCDCSGTGYL----GRSCE 655 (1245)
T ss_dssp SCGGGS--CCCCTTCEEEECSSSEEEECTTTTEE----STTSC
T ss_pred CCCCCc--cCCCCCCEEeCCCCCeEEECCCCCcc----cccCc
Confidence 577875 46765 99999999999999 7998 88884
No 160
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=55.51 E-value=2.5 Score=36.31 Aligned_cols=20 Identities=40% Similarity=1.039 Sum_probs=0.0
Q ss_pred eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 24 TCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 24 ~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
+|.+.. +|.|++||. |..|+
T Consensus 378 ~C~~~~---~C~C~~G~~----G~~Ce 397 (426)
T 3zyj_B 378 TCHNNV---RCLCPAAYT----GILCE 397 (426)
T ss_dssp ---------------------------
T ss_pred CcCCCC---CCcCCCCCc----CCCCc
Confidence 576654 899999999 77784
No 161
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=53.00 E-value=4.7 Score=34.77 Aligned_cols=25 Identities=40% Similarity=1.132 Sum_probs=19.6
Q ss_pred CCCee--eEEeecceEEEecCCCcEEcCCCCcc
Q psy8443 19 HGCEH--TCKNILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 19 ~~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
+.|.+ .| .+++|+|.|++||. |..|
T Consensus 250 ~~C~~~g~C--~~~~~~C~C~~G~~----G~~C 276 (423)
T 2gy5_A 250 EGCKSYVFC--LPDPYGCSCATGWK----GLQC 276 (423)
T ss_dssp TTTTTCCEE--ETTTTEEECCBTCB----SGGG
T ss_pred CCCCCCCEE--CCCCCeEEeCCCcc----cccc
Confidence 34543 56 46899999999998 8889
No 162
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=52.61 E-value=9.5 Score=26.28 Aligned_cols=19 Identities=16% Similarity=0.572 Sum_probs=15.2
Q ss_pred ccccccC--Cce-eeeccCCeE
Q psy8443 188 HECRNTI--GSY-ICSCHNGYT 206 (330)
Q Consensus 188 ~~C~n~~--gsy-~C~C~~G~~ 206 (330)
++|.+.. .+| .|.|++||.
T Consensus 7 gtC~~~~~~~~~~~C~Cp~g~~ 28 (122)
T 2fd6_A 7 GTCVSNKYFSNIHWCNCPKKFG 28 (122)
T ss_dssp CEEEECTTTTTCEEEECCTTEE
T ss_pred CCcCCCcccCCCCCccCCCCCC
Confidence 4688774 556 999999998
No 163
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=51.42 E-value=25 Score=29.66 Aligned_cols=19 Identities=32% Similarity=0.587 Sum_probs=16.4
Q ss_pred eecceEEEecCCCcEEcCCCCcc
Q psy8443 27 NILGGYECSCKIGYELHSDGKIC 49 (330)
Q Consensus 27 n~~gsy~C~C~~G~~l~~dg~~C 49 (330)
+..+.+.|.|.+||. |..|
T Consensus 267 ~~~~~~~C~C~~nt~----G~~C 285 (375)
T 4aqt_A 267 NEFDKLMCNCKHNTY----GVDC 285 (375)
T ss_dssp CTTSCEEECCCTTEE----STTS
T ss_pred CCCCCeeeeCcCCCc----CCCc
Confidence 456788999999999 8889
No 164
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=46.90 E-value=19 Score=23.25 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=30.6
Q ss_pred ceeeeeEeec--cccCCCCCCee--eEEeec-ceEEEecCCCcE
Q psy8443 3 KLRIRWFKFD--ECALEDHGCEH--TCKNIL-GGYECSCKIGYE 41 (330)
Q Consensus 3 ~~~~~C~did--eC~~~~~~C~~--~C~n~~-gsy~C~C~~G~~ 41 (330)
|++..|+.-+ .|..++++|+. .|.... .--.|.|...+.
T Consensus 36 k~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 36 EDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp EETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred ecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence 5666787666 78888889986 998887 678899988764
No 165
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=46.87 E-value=11 Score=18.95 Aligned_cols=14 Identities=43% Similarity=0.925 Sum_probs=10.9
Q ss_pred eeeccCCeEEccCC
Q psy8443 198 ICSCHNGYTLLENG 211 (330)
Q Consensus 198 ~C~C~~G~~l~~~~ 211 (330)
-|.|++||..+.++
T Consensus 6 GC~C~~G~vrn~~G 19 (32)
T 3ssb_I 6 KCYCEDGYARDVNG 19 (32)
T ss_dssp EEEECTTEEECTTS
T ss_pred CCCcCCCcEECCCC
Confidence 48999999977544
No 166
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=44.10 E-value=13 Score=23.20 Aligned_cols=19 Identities=32% Similarity=0.557 Sum_probs=15.1
Q ss_pred EEecCCCcEEcCCCCcccc
Q psy8443 33 ECSCKIGYELHSDGKICVG 51 (330)
Q Consensus 33 ~C~C~~G~~l~~dg~~C~~ 51 (330)
-|.|++||.+..++..|+.
T Consensus 48 GC~C~~G~vr~~~~g~CV~ 66 (78)
T 2p3f_N 48 ACVCKDGFYRDTVIGDCVR 66 (78)
T ss_dssp EEEECSSCEEETTTTEEEC
T ss_pred CcCcCCCEeEcCCCCceEC
Confidence 5999999998766467964
No 167
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=43.73 E-value=11 Score=28.19 Aligned_cols=27 Identities=37% Similarity=0.986 Sum_probs=18.9
Q ss_pred ccccccccc---CCceeeeccCCeEEccCCCCcc
Q psy8443 185 GCQHECRNT---IGSYICSCHNGYTLLENGHDCK 215 (330)
Q Consensus 185 ~C~~~C~n~---~gsy~C~C~~G~~l~~~~~~C~ 215 (330)
.|...|.|. .+-.+|.|++||. |..|.
T Consensus 150 ~C~~~C~ngG~Cv~P~~C~C~~Gw~----G~~C~ 179 (188)
T 2ygo_A 150 ECPGGCRNGGFCNERRICECPDGFH----GPHCE 179 (188)
T ss_dssp CCTTCCCTTCEECTTSCEECCTTCB----TTTTC
T ss_pred ccCCCCCCCCEeCCCCcccCcCCCC----CCCCc
Confidence 455667764 3456899999999 55564
No 168
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=37.88 E-value=18 Score=20.75 Aligned_cols=17 Identities=29% Similarity=0.815 Sum_probs=13.2
Q ss_pred EecCCCcEEcCCCCcccc
Q psy8443 34 CSCKIGYELHSDGKICVG 51 (330)
Q Consensus 34 C~C~~G~~l~~dg~~C~~ 51 (330)
|.|++||.+..+ ..|+.
T Consensus 36 C~C~~G~v~~~~-g~CV~ 52 (56)
T 1ccv_A 36 CQCQEGFLRNGE-GACVL 52 (56)
T ss_dssp EEECTTCEEETT-TEEEC
T ss_pred CcCCCCeeECCC-CcccC
Confidence 999999997654 57753
No 169
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=34.62 E-value=26 Score=25.46 Aligned_cols=23 Identities=30% Similarity=0.710 Sum_probs=18.8
Q ss_pred eEEeec--ceEEE-ecCCCcEEcCCCCccc
Q psy8443 24 TCKNIL--GGYEC-SCKIGYELHSDGKICV 50 (330)
Q Consensus 24 ~C~n~~--gsy~C-~C~~G~~l~~dg~~C~ 50 (330)
.|.... +.+.| .|++||+ |..|+
T Consensus 8 ~C~~~~~~g~~~C~~C~~g~~----G~~Ce 33 (162)
T 1klo_A 8 SCAIVPKTKEVVCTHCPTGTA----GKRCE 33 (162)
T ss_dssp CEEECSSSCCEEECSCCTTEE----STTSC
T ss_pred cccccCCCCCEEeCCCCCCCc----CCCCc
Confidence 777665 67999 7999999 88883
No 170
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=33.45 E-value=13 Score=34.19 Aligned_cols=14 Identities=36% Similarity=1.049 Sum_probs=9.0
Q ss_pred EEEecCCCcEEcCCCCcc
Q psy8443 32 YECSCKIGYELHSDGKIC 49 (330)
Q Consensus 32 y~C~C~~G~~l~~dg~~C 49 (330)
++|.|++||. |..|
T Consensus 577 g~C~C~~Gy~----G~~C 590 (687)
T 3k6s_B 577 NVCECHSGYQ----LPLC 590 (687)
T ss_dssp SCBCCSTTCC----TTTT
T ss_pred CEEECCCCCc----CCCC
Confidence 3566777766 6666
No 171
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=28.94 E-value=27 Score=26.81 Aligned_cols=23 Identities=35% Similarity=0.668 Sum_probs=17.7
Q ss_pred CCee--eEEeecceEEEecCCCcEEcCCCCccc
Q psy8443 20 GCEH--TCKNILGGYECSCKIGYELHSDGKICV 50 (330)
Q Consensus 20 ~C~~--~C~n~~gsy~C~C~~G~~l~~dg~~C~ 50 (330)
.|.+ .|.. ..|.|++||. |..|+
T Consensus 97 ~Csg~G~C~~----g~C~C~~G~~----G~~Ce 121 (217)
T 2p28_B 97 LCHGKGFLEC----GICRCDTGYI----GKNCE 121 (217)
T ss_dssp TTTTSEEEET----TEEEECTTEE----STTSC
T ss_pred ccCCCceEEC----CEEECCCCcc----CCccc
Confidence 4653 7764 4799999999 88883
No 172
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=28.58 E-value=1.1e+02 Score=25.87 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=18.1
Q ss_pred ccCceEEEecccCccccCCCccccc--ccc----cCCceeeeccCCeEEc
Q psy8443 165 KSGFSAFFFTDKDECMTNNGGCQHE--CRN----TIGSYICSCHNGYTLL 208 (330)
Q Consensus 165 ~~Gf~~~~~~~~~eC~~~~~~C~~~--C~n----~~gsy~C~C~~G~~l~ 208 (330)
.+||.+.|.-....|.....+-.+. +.. .......+|.+||.|.
T Consensus 3 ~~gw~~~~~c~~~~C~~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~ 52 (403)
T 1zjk_A 3 MTGWKIHYTSTAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELL 52 (403)
T ss_dssp ----------CCCCBCCCCCCTTEEESSCCSCBCTTCEEEEEECTTEEEE
T ss_pred CCceEEEEEECCccCcCCCCCCCceEcccCCccccCCEEEEEeCCCCEEc
Confidence 4678877765566776543332221 221 1223467899999994
No 173
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=24.72 E-value=68 Score=28.45 Aligned_cols=34 Identities=24% Similarity=0.525 Sum_probs=23.4
Q ss_pred ccCccccCC-Ccccc--ccccc-CCceeeeccCCeEEc
Q psy8443 175 DKDECMTNN-GGCQH--ECRNT-IGSYICSCHNGYTLL 208 (330)
Q Consensus 175 ~~~eC~~~~-~~C~~--~C~n~-~gsy~C~C~~G~~l~ 208 (330)
..+.|..+. .+|.. .|+.. .+.|.|.|+.||...
T Consensus 17 ~~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~ 54 (551)
T 3fby_A 17 AQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGN 54 (551)
T ss_dssp BCCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESS
T ss_pred ccccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCC
Confidence 445666643 46653 47765 577899999999853
Done!