RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8443
(330 letters)
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 108
Score = 88.5 bits (218), Expect = 2e-22
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQ------TCAYDHVVMYD 281
GVIK+P P+ YP+ EC + I L F+ F+LEP C YD + ++D
Sbjct: 1 GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWD 60
Query: 282 GDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 329
G +GR+CG K P I + S L M+F +D+++ ++GF A ++
Sbjct: 61 GFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYS 108
Score = 86.5 bits (213), Expect = 9e-22
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 68 GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSS--CEYDNLTVFS 125
G + SP FP+ Y + C + + AP I L F FD+E ++ C YD L ++
Sbjct: 1 GVIKSPGFPEKYPNSLECTYIVFAPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWD 60
Query: 126 KIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
D G +CG K P I S L + F++D+++ K GFSA +
Sbjct: 61 GFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANY 107
>d1szba1 b.23.1.1 (A:3-123) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 121
Score = 85.3 bits (210), Expect = 3e-21
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 226 PNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSP 285
G + +P P Y + +E W T PG+R++L F F+LE C YD V + G
Sbjct: 9 VFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSHLCEYDFVKLSSGAKV 68
Query: 286 DSLTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQR--KGFIATHTT 330
+ G+ P + + L + F+SD S ++ GF A +
Sbjct: 69 LATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA 119
Score = 72.6 bits (177), Expect = 1e-16
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 66 SNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFS 125
G L SP FP Y ++ W + APP YR+ L FTHFD+E ++ CEYD + + S
Sbjct: 9 VFGRLASPGFPGEYANDQERRWTLTAPPGYRLRLYFTHFDLELSH----LCEYDFVKLSS 64
Query: 126 KIGDSFKSQGVFCGSKLPP----VILSEGNALRIEFHSDNSVQK--SGFSAFFFT 174
G S G++L I F SD S +K +GF AF+
Sbjct: 65 GAKVLATLCGQESTDTERAPGKDTFYSLGSSLDITFRSDYSNEKPFTGFEAFYAA 119
>d1nzia1 b.23.1.1 (A:1-117) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 84.2 bits (207), Expect = 7e-21
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 228 GVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVVMYDGDSPDS 287
G I +PN+P YPS+ E W G+ I L F ++E + CAYD V + GD+ +
Sbjct: 6 GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEG 65
Query: 288 LTLGRFCGIKLPYP----IITGSNQLYMMFKSDASVQRK--GFIATHTT 330
G+ P N+L ++FKSD S + + GF A +
Sbjct: 66 RLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYYVA 114
Score = 71.4 bits (174), Expect = 4e-16
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 68 GTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKI 127
G + SP++P Y W+I P Y I L FTH DIE +C YD++ + S
Sbjct: 6 GEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIE----LSENCAYDSVQIISGD 61
Query: 128 GDSFKSQGVFCGSKLPP----VILSEGNALRIEFHSDNSVQK--SGFSAFF 172
+ + G + N L++ F SD S ++ +GF+A++
Sbjct: 62 TEEGRLCGQRSSNNPHSPIVEEFQVPYNKLQVIFKSDFSNEERFTGFAAYY 112
>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 114
Score = 78.1 bits (191), Expect = 1e-18
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 59 CGG-ILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCE 117
C G + +G L+SP +P Y K +C + I + I+L+F + ++ C
Sbjct: 1 CSGQVFTGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMH-PEAQCP 59
Query: 118 YDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFT 174
YD+L + + G FCG LPP I ++ N + I F +D S +G+ + +
Sbjct: 60 YDSLKIQ----TDKREYGPFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 112
Score = 77.3 bits (189), Expect = 3e-18
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 224 TAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQ---EFELEPHQTCAYDHVVMY 280
T +G + +P +P YP C ++ G I L F + E+ P C YD + +
Sbjct: 7 TGRSGFLSSPEYPQPYPKLSSCAYNIRLEEGFSITLDFVESFDVEMHPEAQCPYDSLKIQ 66
Query: 281 DGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
FCG LP I T SN++ + F +D S G+ +T+
Sbjct: 67 TDKREYG----PFCGKTLPPRIETDSNKVTITFTTDESGNHTGWKIHYTS 112
>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos
taurus) [TaxId: 9913]}
Length = 111
Score = 62.7 bits (151), Expect = 4e-13
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 15/117 (12%)
Query: 59 CGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCEY 118
CGGILK +G + + Y C+W I PP+Y + ++ + + N +
Sbjct: 7 CGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYLQLNCNKESLEIID- 60
Query: 119 DNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175
G S G+ + +++ + S + +F D
Sbjct: 61 ---------GLPGSPVLGKICEGSLMDYRSSGSIMTVKYIREPEHPASFYEVLYFQD 108
Score = 61.1 bits (147), Expect = 2e-12
Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 215 KEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAY 274
+ C + +GVI T Y K C+W P + +++ Q C
Sbjct: 3 RNTNCGGILKEESGVIATY-----YGPKTNCVWTIQMPPEYHVRVSIQYL----QLNCNK 53
Query: 275 DHVVMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHT 329
+ + + DG + G + + + + + + + +
Sbjct: 54 ESLEIIDGLPGSPVLGKICEGS--LMDYRSSGSIMTVKYIREPEHPASFYEVLYF 106
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 59.5 bits (144), Expect = 1e-12
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
TD +EC+ C NT GSYIC C + L C
Sbjct: 1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGC 41
Score = 54.1 bits (130), Expect = 8e-11
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
+EC C N G Y C C +EL+ CV
Sbjct: 4 NECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCV 42
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 59.0 bits (143), Expect = 2e-12
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
C +NG C C S +CSC GYTL +NG C
Sbjct: 3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACI 39
Score = 54.4 bits (131), Expect = 9e-11
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVK 54
C+L++ C+ C CSC GY L +GK C+ +
Sbjct: 3 CSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGP 43
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 59.0 bits (143), Expect = 2e-12
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
C +NGGC H C +G CSC GY L ++ C
Sbjct: 2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHP 39
Score = 53.6 bits (129), Expect = 1e-10
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVK 54
C+L++ GC H C +G CSC GY+L D C +VK
Sbjct: 2 CSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVK 42
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 58.6 bits (142), Expect = 2e-12
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
DEC + C C N G Y C C G+ L + CK
Sbjct: 2 DEC-QDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 39
Score = 54.4 bits (131), Expect = 8e-11
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
DEC + C C N+ GGY+C C+ G++L K C
Sbjct: 2 DECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKAC 38
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus)
[TaxId: 9913]}
Length = 51
Score = 58.3 bits (141), Expect = 3e-12
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 179 CMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
C +NGGC CR CSC +GY L ++ C
Sbjct: 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVS 38
Score = 56.0 bits (135), Expect = 2e-11
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 14 CALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKH 65
C+L++ GC+ C+ CSC GY L D K CV + + CG +
Sbjct: 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF--PCGKFTQG 50
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 58.2 bits (141), Expect = 3e-12
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
+EC+ NNGGC H C + Y C C +G+ L+ C+
Sbjct: 3 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRCE 40
Score = 52.1 bits (125), Expect = 5e-10
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
+EC + GC H C ++ GYEC C G++L + C
Sbjct: 3 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV-AQRRC 39
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 58.0 bits (140), Expect = 4e-12
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 177 DECMTNNG---GCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
DEC G C H C N +G + CSC GY L N C E
Sbjct: 2 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSE 44
Score = 53.7 bits (129), Expect = 1e-10
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 12 DECAL---EDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
DEC + E C+H C N LGG+ CSC+ GY LH + + C
Sbjct: 2 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS 43
>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 112
Score = 59.6 bits (143), Expect = 5e-12
Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 15/123 (12%)
Query: 53 VKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLF 112
+ D CG ++K ++G++++ C W I+ P ++ + + ++
Sbjct: 3 INGPDECGRVIKDTSGSISNTDRQ-----KNLCTWTILMKPDQKVRMAIPYLNL------ 51
Query: 113 QSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFF 172
S S G C + + N + I+++ + S F +F
Sbjct: 52 ---ACGKEYVEVFDGLLSGPSYGKLCAGAAIVFLSTA-NTMTIKYNRISGNSSSPFLIYF 107
Query: 173 FTD 175
+
Sbjct: 108 YGS 110
Score = 53.1 bits (126), Expect = 1e-09
Identities = 16/113 (14%), Positives = 35/113 (30%), Gaps = 11/113 (9%)
Query: 218 GCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHV 277
C I +G I + C W P ++++ + C ++V
Sbjct: 8 ECGRVIKDTSGSISNTDRQKNL-----CTWTILMKPDQKVRMAIPYL----NLACGKEYV 58
Query: 278 VMYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
++DG G+ C + T +N + + + + F+
Sbjct: 59 EVFDGLLSGPSY-GKLCAGAAIVFLST-ANTMTIKYNRISGNSSSPFLIYFYG 109
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 56.7 bits (137), Expect = 1e-11
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 175 DKDECMTNNGGCQ-HECRNTIGSYICSCHNGYTLLENGHDC 214
D DEC G CQ +C NT GS+ C C GY L E+ C
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
Score = 50.2 bits (120), Expect = 2e-09
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 12 DECALEDHGCE-HTCKNILGGYECSCKIGYELHSDGKIC 49
DEC C+ C N G ++C C GY L+ D ++C
Sbjct: 4 DECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 56.4 bits (136), Expect = 1e-11
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 177 DECMT-NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK 215
+EC + C H C N IG Y CSC Y L ++ +C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCG 40
Score = 51.0 bits (122), Expect = 1e-09
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 12 DECA-LEDHGCEHTCKNILGGYECSCKIGYELHSDGKIC 49
+EC D C H C N +GGY CSC Y LH D K C
Sbjct: 1 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 56.4 bits (136), Expect = 1e-11
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 175 DKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDC 214
D DEC + C+ C NT GSY C C G+ L N C
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 41
Score = 52.1 bits (125), Expect = 5e-10
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 12 DECALEDHGCEH-TCKNILGGYECSCKIGYELHSDGKICV 50
DEC + C C N G Y C C G++L + C+
Sbjct: 3 DECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISACI 42
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 56.1 bits (135), Expect = 2e-11
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 177 DECMTNNGG---CQHECRNTIGSYICSCHNGYTLLENGHDCK 215
DEC T+ G C H C N +G Y CSC GY L +N H C
Sbjct: 2 DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS 43
Score = 50.7 bits (121), Expect = 2e-09
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 12 DECALEDHG---CEHTCKNILGGYECSCKIGYELHSDGKICVG 51
DEC C+H C N LGGY CSC++GY LH + C
Sbjct: 2 DECRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCSA 44
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 56.1 bits (135), Expect = 2e-11
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 175 DKDECMTNNGGC--------QHECRNTIGSYICSCHNGYTLLENGHDCK 215
D DEC + + QH C N +G Y CSC GY L E+ H C+
Sbjct: 3 DLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51
Score = 50.0 bits (119), Expect = 3e-09
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Query: 12 DECALEDHGC--------EHTCKNILGGYECSCKIGYELHSDGKIC 49
DECA +H C N +GGY CSC+ GYEL D C
Sbjct: 5 DECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSC 50
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 55.2 bits (133), Expect = 4e-11
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 179 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 216
C+ NGGC+ C + G C CH GY+LL +G C
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTP 40
Score = 52.1 bits (125), Expect = 7e-10
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 14 CALEDHGCEHTCKNILGG-YECSCKIGYELHSDGKICVGSVKARDACGGI 62
C E+ GCE C + G C C GY L +DG C +V+ CG I
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY--PCGKI 49
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 57
Score = 54.8 bits (132), Expect = 8e-11
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 179 CMTNNGGCQHECRNTIG-SYICSCHNGYTLLENGHDCKE 216
C NG C+ C+N+ +CSC GY L EN C+
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEP 41
Score = 49.4 bits (118), Expect = 5e-09
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 14 CALEDHGCEHTCKNILG-GYECSCKIGYELHSDGKICVGSVKARDACGGI 62
C +++ CE CKN CSC GY L + K C +V CG +
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPF--PCGRV 50
>d1sppa_ b.23.1.1 (A:) Major seminal plasma glycoprotein PSP-I {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 109
Score = 55.4 bits (132), Expect = 2e-10
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 16/118 (13%)
Query: 58 ACGGILKHSNGTLTSPSFPDLYIKNKTCIWEIVAPPQYRISLNFTHFDIEGNNLFQSSCE 117
ACGG L GT+ + P C+W + P+Y++ ++ ++ +
Sbjct: 5 ACGGRLTDDYGTIFTYKGP-----KTECVWTLQVDPKYKLLVSIPTLNLTCGKEY----- 54
Query: 118 YDNLTVFSKIGDSFKSQGVFCGSKLPPVILSEGNALRIEFHSDNSVQKSGFSAFFFTD 175
V G L + + + +++ D+ S + F D
Sbjct: 55 -----VEVLEGAPGSKSLGKFCEGLSILN-RGSSGMTVKYKRDSGHPASPYEIIFLRD 106
Score = 53.9 bits (128), Expect = 6e-10
Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 12/112 (10%)
Query: 219 CKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQTCAYDHVV 278
C +T G I T P EC+W P +++ + + TC ++V
Sbjct: 6 CGGRLTDDYGTIFTYKGPK-----TECVWTLQVDPKYKLLVSIPTL----NLTCGKEYVE 56
Query: 279 MYDGDSPDSLTLGRFCGIKLPYPIITGSNQLYMMFKSDASVQRKGFIATHTT 330
+ +G + + GS+ + + +K D+ +
Sbjct: 57 VLEGAPGSKS---LGKFCEGLSILNRGSSGMTVKYKRDSGHPASPYEIIFLR 105
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 53.2 bits (128), Expect = 2e-10
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 175 DKDECMTNNGGCQHECRNTIGSYICSCHNGYTLL-ENGHDC 214
D DEC N G C C N G++ C C L + G DC
Sbjct: 1 DIDEC-ENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40
Score = 44.8 bits (106), Expect = 2e-07
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYEL-HSDGKIC 49
DEC C C N+ G +EC C L G C
Sbjct: 3 DECE-NGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 40
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 53.4 bits (128), Expect = 2e-10
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 177 DECMTNNGGCQHEC------RNTIGSYICSCHNGYTLLENGHDC 214
+ +NGGCQ+ C + C+C +G L + C
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
Score = 49.2 bits (117), Expect = 5e-09
Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 12 DECALEDHGCEHTC------KNILGGYECSCKIGYELHSDGKICV 50
+ L + GC++ C + C+C G L D + C+
Sbjct: 5 ERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 49
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 52.1 bits (125), Expect = 5e-10
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
D DEC + +C NT GSY C C GY L G++C
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNEC 41
Score = 46.3 bits (110), Expect = 5e-08
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYELHSDGKICV 50
DEC D C N G Y C C GY L G CV
Sbjct: 6 DECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECV 42
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 51.0 bits (122), Expect = 1e-09
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 174 TDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTL-LENGHDC 214
TD DEC + C +C NT G + C C GY +C
Sbjct: 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43
Score = 45.6 bits (108), Expect = 1e-07
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 12 DECALEDHGCEH-TCKNILGGYECSCKIGYEL-HSDGKICV 50
DEC + C C N G +EC C GYE K C+
Sbjct: 4 DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM 44
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 40.1 bits (94), Expect = 9e-06
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 175 DKDECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC 214
D DEC C+H +C NT+GS+ C C GYT G C
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYT----GPRC 39
Score = 36.2 bits (84), Expect = 2e-04
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYE 41
DEC+L + CEH C N LG +EC C GY
Sbjct: 4 DECSLGANPCEHAGKCINTLGSFECQCLQGYT 35
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 35.6 bits (82), Expect = 3e-04
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 4/38 (10%)
Query: 179 CMTNNGGC--QHECRNTIGSYICSCHNGYTLLENGHDC 214
C N C ECR+ + C C YT NG C
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQC 37
Score = 34.0 bits (78), Expect = 0.001
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 14 CALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKICV 50
CA H C C++ G+ C C Y +G+ CV
Sbjct: 2 CANNRHQCSVHAECRDYATGFCCRCVANY--TGNGRQCV 38
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 34.3 bits (79), Expect = 8e-04
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 10/43 (23%)
Query: 175 DKDECMTN---NGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
D D+C +N NGG C++ I SY C C G+ G +C
Sbjct: 2 DGDQCESNPCLNGGS---CKDDINSYECWCPFGFE----GKNC 37
Score = 28.9 bits (65), Expect = 0.066
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 8/40 (20%)
Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYELHSDGKIC 49
D+C + C + +CK+ + YEC C G+E GK C
Sbjct: 4 DQCE--SNPCLNGGSCKDDINSYECWCPFGFE----GKNC 37
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 33.7 bits (77), Expect = 0.001
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 12 DECALEDHGCEHTCKNILGGYECSCKIGYE 41
DEC++ + TCKN++GG+EC+C+ G+E
Sbjct: 2 DECSVGNPCGNGTCKNVIGGFECTCEEGFE 31
Score = 27.9 bits (62), Expect = 0.19
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 177 DECMTNNGGCQHECRNTIGSYICSCHNGY 205
DEC N C+N IG + C+C G+
Sbjct: 2 DECSVGNPCGNGTCKNVIGGFECTCEEGF 30
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 33.9 bits (78), Expect = 0.001
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 10/43 (23%)
Query: 175 DKDECMTN---NGGCQHECRNTIGSYICSCHNGYTLLENGHDC 214
D D+C ++ NGG C++ + SYIC C + G +C
Sbjct: 1 DGDQCASSPCQNGGS---CKDQLQSYICFCLPAFE----GRNC 36
Score = 27.7 bits (62), Expect = 0.16
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYE 41
D+CA C++ +CK+ L Y C C +E
Sbjct: 3 DQCA--SSPCQNGGSCKDQLQSYICFCLPAFE 32
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 32.0 bits (73), Expect = 0.005
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Query: 177 DECMTN---NGGCQHECRNTIGSYICSCHNGYT 206
D+C T+ N G C++ +G Y C+C G+
Sbjct: 1 DQCETSPCQNQGK---CKDGLGEYTCTCLEGFE 30
Score = 28.5 bits (64), Expect = 0.087
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYE 41
D+C C++ CK+ LG Y C+C G+E
Sbjct: 1 DQCE--TSPCQNQGKCKDGLGEYTCTCLEGFE 30
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 31.2 bits (71), Expect = 0.010
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 8/40 (20%)
Query: 177 DECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC 214
+EC++N CQ+ C + IG + C C GY G C
Sbjct: 2 NECVSNP--CQNDATCLDQIGEFQCICMPGYE----GVHC 35
Score = 28.5 bits (64), Expect = 0.12
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYE 41
+EC + C++ TC + +G ++C C GYE
Sbjct: 2 NECV--SNPCQNDATCLDQIGEFQCICMPGYE 31
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 30.4 bits (69), Expect = 0.018
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 8/40 (20%)
Query: 177 DECMTNNGGCQH--ECRNTIGSYICSCHNGYTLLENGHDC 214
DEC ++ C H C + I + C C G+T GH C
Sbjct: 1 DECASSP--CLHNGRCLDKINEFQCECPTGFT----GHLC 34
Score = 28.5 bits (64), Expect = 0.100
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYE 41
DECA C H C + + ++C C G+
Sbjct: 1 DECA--SSPCLHNGRCLDKINEFQCECPTGFT 30
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 29.3 bits (66), Expect = 0.057
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 10/43 (23%)
Query: 177 DECMTN---NGGCQHECRNTIGSYICSCHNGYTLLENGHDCKE 216
C G C TI +Y C C G++ G C++
Sbjct: 2 AACTNTSCSGHGE---CVETINNYTCKCDPGFS----GLKCEQ 37
Score = 25.9 bits (57), Expect = 0.82
Identities = 7/32 (21%), Positives = 10/32 (31%), Gaps = 4/32 (12%)
Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYE 41
C + C C + Y C C G+
Sbjct: 2 AACT--NTSCSGHGECVETINNYTCKCDPGFS 31
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 28.6 bits (64), Expect = 0.11
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Query: 177 DECMTN---NGGCQHECRNTIGSYICSCHNGYT 206
C G C TIG+Y CSC+ G+
Sbjct: 2 ASCQDMSCSKQGE---CLETIGNYTCSCYPGFY 31
Score = 25.5 bits (56), Expect = 1.1
Identities = 10/32 (31%), Positives = 12/32 (37%), Gaps = 4/32 (12%)
Query: 12 DECALEDHGCEH--TCKNILGGYECSCKIGYE 41
C D C C +G Y CSC G+
Sbjct: 2 ASCQ--DMSCSKQGECLETIGNYTCSCYPGFY 31
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 28.2 bits (63), Expect = 0.14
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 7/42 (16%)
Query: 174 TDKDECMTNNGGCQH-ECRNTIGSYICSCHNGYTLLENGHDC 214
+ C + C H C + IGS+ C C +G+ G C
Sbjct: 6 PLEHPCASLC--CGHGTCIDGIGSFSCDCRSGWE----GRFC 41
Score = 24.8 bits (54), Expect = 2.6
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 12 DECALEDHGCEH-TCKNILGGYECSCKIGYE 41
CA C H TC + +G + C C+ G+E
Sbjct: 9 HPCA--SLCCGHGTCIDGIGSFSCDCRSGWE 37
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 27.3 bits (60), Expect = 0.48
Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 5/39 (12%)
Query: 173 FTDKDECMTN---NGGC--QHECRNTIGSYICSCHNGYT 206
E NGG + + Y+C C G+T
Sbjct: 3 LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFT 41
>d1t0aa_ d.79.5.1 (A:) 2C-methyl-D-erythritol 2,4-cyclodiphosphate
synthase IspF {Shewanella oneidensis [TaxId: 70863]}
Length = 158
Score = 27.5 bits (61), Expect = 1.4
Identities = 13/73 (17%), Positives = 22/73 (30%), Gaps = 4/73 (5%)
Query: 28 ILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIW 87
IL G E + G HSDG + + ++ DA G + G +
Sbjct: 20 ILCGVEVPYETGLVAHSDGDVVLHAIS--DAILGAMAL--GDIGKHFPDTDAAYKGADSR 75
Query: 88 EIVAPPQYRISLN 100
++
Sbjct: 76 VLLRHCYALAKAK 88
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 27.8 bits (61), Expect = 1.6
Identities = 16/86 (18%), Positives = 21/86 (24%), Gaps = 5/86 (5%)
Query: 182 NNGGCQHECRNTIGSYICSCHNGYTLLENGHDCK-EGGCKYEITAPNGVIKTP---NHPD 237
N E S I + D E G +T I+
Sbjct: 122 NKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTA 181
Query: 238 YYPSKRECIWHFTT-TPGHRIKLVFQ 262
+ C HFT I+ VF
Sbjct: 182 SGDGRHYCYPHFTCAVDTENIRRVFN 207
>d1q8ka2 d.58.51.1 (A:186-302) eIF-2-alpha, C-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 27.0 bits (60), Expect = 1.7
Identities = 8/61 (13%), Positives = 25/61 (40%), Gaps = 9/61 (14%)
Query: 89 IVAPPQYRISLNFTHFDIEGNNLFQSSCEYDNLTVFSKIGDSFKSQGVFCGSKLPPVILS 148
++APP+Y ++ EG ++ + I + + + ++ P +++
Sbjct: 43 LIAPPRYVMTTTTLERT-EGLSVLSQAMA--------VIKEKIEEKRGVFNVQMEPKVVT 93
Query: 149 E 149
+
Sbjct: 94 D 94
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 46
Score = 25.1 bits (55), Expect = 1.8
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 206
C+ +G C + + C C GYT
Sbjct: 9 DMNGYCL--HGQCIYL--VDMSQNYCRCEVGYT 37
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 26.3 bits (58), Expect = 4.5
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 254 GHRIKLVFQEFELEPHQTCAYDHVVM 279
R+ +VFQ F L H T ++V+
Sbjct: 88 RTRLTMVFQHFNLWSHMT-VLENVME 112
>d1w55a2 d.79.5.1 (A:208-370) IspD/ispF bifunctional enzyme, MECDP
synthase domain {Campylobacter jejuni [TaxId: 197]}
Length = 163
Score = 25.9 bits (57), Expect = 5.7
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 28 ILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSN 67
+L G + +G + HSDG + S+ DA G +
Sbjct: 21 LLAGVQIHPTMGLKAHSDGDVLAHSLT--DAILGAAGLGD 58
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 23.7 bits (51), Expect = 6.6
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 182 NNGGCQHECRNTIGSYICSCHNGYT 206
N G C H ++ SY C+C GY+
Sbjct: 16 NGGVCMH--IESLDSYTCNCVIGYS 38
>d1iv3a_ d.79.5.1 (A:) 2C-methyl-D-erythritol 2,4-cyclodiphosphate
synthase IspF {Thermus thermophilus [TaxId: 274]}
Length = 150
Score = 25.6 bits (56), Expect = 7.0
Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Query: 28 ILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSN-GTLTSPSFPDLYIKNKTCI 86
L G +G HSDG + ++ DA + G L + P +
Sbjct: 18 YLCGLLIPSPVGALAHSDGDAAMHALT--DALLSAYGLGDIGLLFPDTDPRWRGERSEVF 75
>d1gx1a_ d.79.5.1 (A:) 2C-methyl-D-erythritol 2,4-cyclodiphosphate
synthase IspF {Escherichia coli [TaxId: 562]}
Length = 157
Score = 25.2 bits (55), Expect = 8.0
Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Query: 28 ILGGYECSCKIGYELHSDGKICVGSVKARDACGGILKHSNGTLTSPSFPDLYIKNKTCIW 87
I+GG + G HSDG + + ++ DA G + G +
Sbjct: 20 IIGGVRIPYEKGLLAHSDGDVALHALT--DALLGAA--ALGDIGKLFPDTDPAFKGADSR 75
Query: 88 EIVAPPQYRISLNFTHF 104
E++ RI
Sbjct: 76 ELLREAWRRIQAKGYTL 92
>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase
{Lactobacillus plantarum [TaxId: 1590]}
Length = 207
Score = 25.6 bits (54), Expect = 9.0
Identities = 10/146 (6%), Positives = 30/146 (20%)
Query: 152 ALRIEFHSDNSVQKSGFSAFFFTDKDECMTNNGGCQHECRNTIGSYICSCHNGYTLLENG 211
F + + +A + + + + Y + +
Sbjct: 31 TYGKPFSPAQAQKTFPMAAEQAMTELGIAASEFDHFQAQYEDVMASHYDQIELYPGITSL 90
Query: 212 HDCKEGGCKYEITAPNGVIKTPNHPDYYPSKRECIWHFTTTPGHRIKLVFQEFELEPHQT 271
+ + I + + YP + + K +
Sbjct: 91 FEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKV 150
Query: 272 CAYDHVVMYDGDSPDSLTLGRFCGIK 297
++ GDS + +
Sbjct: 151 NVAPQNALFIGDSVSDEQTAQAANVD 176
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
sapiens) [TaxId: 9606]}
Length = 49
Score = 23.3 bits (50), Expect = 9.5
Identities = 8/33 (24%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 174 TDKDECMTNNGGCQHECRNTIGSYICSCHNGYT 206
+ C +G C+ C CH+GY
Sbjct: 10 SHTQFCF--HGTCRF--LVQEDKPACVCHSGYV 38
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.139 0.455
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,347,806
Number of extensions: 65997
Number of successful extensions: 341
Number of sequences better than 10.0: 1
Number of HSP's gapped: 299
Number of HSP's successfully gapped: 119
Length of query: 330
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 244
Effective length of database: 1,226,816
Effective search space: 299343104
Effective search space used: 299343104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.5 bits)