RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8445
(131 letters)
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens}
SCOP: c.2.1.2
Length = 272
Score = 168 bits (428), Expect = 1e-53
Identities = 55/115 (47%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG+GIGR A +F + K LV WDI++ G ET + G K +HT+ +D SNRE++
Sbjct: 37 TGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK-VHTFVVDCSNREDI 95
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
A KV+ E+G+V+ILVNNAG++ L + I KTF+VNVLAHFW F
Sbjct: 96 YSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAF 150
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, SCD,
NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Length = 301
Score = 114 bits (288), Expect = 2e-32
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG +GIG A +F + LV D+D+ + L QG+ H DV + +E+
Sbjct: 37 TGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD-AHGVVCDVRHLDEM 95
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
+R+AD+ + +G V ++ +NAGI+ PL + D R D+++ + F
Sbjct: 96 VRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAF 150
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 114 bits (286), Expect = 6e-32
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKLDVSNREE 68
TG NG+G L +Q + + DI + ++ LE +G + +LDV++RE
Sbjct: 14 TGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREG 73
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
AD+V G V+IL NNAG+ +P+ E D VN+ + F
Sbjct: 74 FKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTF 129
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 104 bits (262), Expect = 1e-28
Identities = 23/110 (20%), Positives = 43/110 (39%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIGRE+A + +V ++ + E G + H + +
Sbjct: 34 TGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFA 93
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
+ + K +G + +L+ N L +RK+ +VN L++
Sbjct: 94 EQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVV 143
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A
{Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 100 bits (251), Expect = 3e-27
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG GIG+ +A + V+ + D ++ + + G + K+DVS+R++V
Sbjct: 8 TGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAV-AVKVDVSDRDQV 66
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
++ RK +G ++VNNAG+ P P+ P+++ K +++NV W
Sbjct: 67 FAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIW 116
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain,
oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans}
SCOP: c.2.1.2
Length = 262
Score = 98.4 bits (246), Expect = 1e-26
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG IG A + + + D++ + + + + E+G + +Y DV++ E V
Sbjct: 13 TGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE-ARSYVCDVTSEEAV 71
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNV 114
+ D V ++ G++ L NNAG P+ + D + +NV
Sbjct: 72 IGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINV 117
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 97.2 bits (243), Expect = 6e-26
Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
+G G +G LA++ + LV + + + + + G + + D+++ +V
Sbjct: 17 SGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR-ALSVGTDITDDAQV 75
Query: 70 LRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ D+ K G V +++NNA +P KP + +R ++ V +
Sbjct: 76 AHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 97.2 bits (243), Expect = 7e-26
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG+++A + + + + G K + DV+ ++V
Sbjct: 38 TGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK-ALPIRCDVTQPDQV 96
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ D++ E+G + I V NAGI+ + + + + ++ D NV F
Sbjct: 97 RGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLT 147
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol,
chiral alcohol, oxidoreductase; HET: NAD; 2.00A
{Agrobacterium tumefaciens}
Length = 263
Score = 96.1 bits (240), Expect = 1e-25
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG +A+ + T+ D+D LE G ++DV+ R V
Sbjct: 18 TGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG----FAVEVDVTKRASV 73
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
K +G +L NAG+ +P + + FDVN F
Sbjct: 74 DAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFL 123
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 95.6 bits (239), Expect = 2e-25
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG GIG+E+A F ++V DI+ N +++ G + + D+++ +E+
Sbjct: 17 TGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ-AFACRCDITSEQEL 75
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+AD ++G+V ILVNNAG KP + R+ +++NV + F +
Sbjct: 76 SALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHL 125
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 96.1 bits (240), Expect = 2e-25
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG+ GIG +A+ + Q + W + + + + + G YK ++S+ + V
Sbjct: 40 TGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH-SKAYKCNISDPKSV 98
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKP--LNEQKPDVIRKTFDVNVLAHFWV 120
+ K+ G + + V NAG+ + ++ D K V++ ++
Sbjct: 99 EETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 95.3 bits (238), Expect = 2e-25
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG+GIGR +AK+F + +V ++ E N+ Q L G + + K DVS +++V
Sbjct: 13 TGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE-VLGVKADVSKKKDV 71
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNV 114
+ + + +L NNAGIM P+ E ++ + VN+
Sbjct: 72 EEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNL 117
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 95.3 bits (238), Expect = 3e-25
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK--NIHTYKLDVSNRE 67
TG G+GIG+ +A V +++ + Q LE G I D++N +
Sbjct: 17 TGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNED 76
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNVLAHFWVLAHFW 125
E R D V G + +V+ AG P+ + + R+T D+NV +VL H
Sbjct: 77 ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAA 135
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 94.5 bits (236), Expect = 4e-25
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK--NIHTYKLDVSNRE 67
TGA GIG A+ + H ++V E E ++ G I L+ + +
Sbjct: 20 TGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQ 79
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFW 119
+ +A +V E G + L++NA I+ P PL + + + VNV A F
Sbjct: 80 QYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFM 132
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 94.5 bits (236), Expect = 5e-25
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG IG + ++ D+DE + + L +G+ + + +DV+N E V
Sbjct: 19 TGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD-VSSVVMDVTNTESV 77
Query: 70 LRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
V ++ G V ILV AGI + + K D+N+ F
Sbjct: 78 QNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRS 129
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 94.2 bits (235), Expect = 7e-25
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG GIGR ++++ + + E+ ET +++E K + LDV+++
Sbjct: 8 TGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAV-FVGLDVTDKA 66
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
D+ +++G +LVNNAGI KPL E + +++ + VNV + F+
Sbjct: 67 NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFF 118
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 93.7 bits (234), Expect = 8e-25
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN--IHTYKLDVSNRE 67
TGA +GIGRE A + ++ T++ +E+ + + E+ + L E
Sbjct: 18 TGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSE 77
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHF 118
++A ++ + +++NAG++ P++EQ P V + VNV A F
Sbjct: 78 NCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATF 129
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative; 1.87A
{Rhodopseudomonas palustris}
Length = 252
Score = 93.5 bits (233), Expect = 1e-24
Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
GAG+ IG E+AK+F T+ + + +E G + I LD N +EV
Sbjct: 13 IGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGR-IVARSLDARNEDEV 71
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAH 123
+ + + + N G P+ E V RK +++ A F
Sbjct: 72 TAFLNAADAH-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRE 124
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 93.3 bits (233), Expect = 1e-24
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG +A +FV+ ++ + + + I ++ D S+ +
Sbjct: 12 TGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHDSSDEDGW 69
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
++ D K G V+ LVNNAGI K + E RK VN+ F+
Sbjct: 70 TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFF 119
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 91.5 bits (228), Expect = 4e-24
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG+G+GR L V+ + + +Q G + D+++ E+V
Sbjct: 9 TGAGSGLGRALTIGLVERGHQVSMMGRRYQ---RLQQQELLLG-NAVIGIVADLAHHEDV 64
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ G ++++ AG P+ + IR+ + N+++ V
Sbjct: 65 DVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILV 115
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 92.2 bits (230), Expect = 4e-24
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK-NIHTYKLDVSNREE 68
TG G+G+GR A + L D+ +G +K + E + T DVS+ +
Sbjct: 19 TGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQ 78
Query: 69 VLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNV 114
V + G + NNAGI P K +N+
Sbjct: 79 VEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 125
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 91.8 bits (229), Expect = 5e-24
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 4 NNPFQL-------TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI 56
F L TG+ G+G A+ ++ DI E+ L +GY
Sbjct: 2 TALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD-A 60
Query: 57 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 116
H DV++ + K+ E V IL+NNAGI KP+ E + + +K D N+ +
Sbjct: 61 HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTS 120
Query: 117 HFWV 120
F V
Sbjct: 121 AFLV 124
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 91.9 bits (229), Expect = 8e-24
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG+GIGR A VT+ E + G + I + DVS+ ++
Sbjct: 34 TGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAI-ALEADVSDELQM 92
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNV 114
+ + G + I+V NAGI P+++ KP +T VN+
Sbjct: 93 RNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNL 138
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of
seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 91.5 bits (228), Expect = 9e-24
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK--NIHTYKLDVSNRE 67
TG+ NGIGR A F + + + ET+Q + G N+++ DV+
Sbjct: 12 TGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA 71
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPC----KPLNEQKPDVIRKTFDVNV 114
+ + G++ ILVNNAG K Q + T ++N+
Sbjct: 72 GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 91.5 bits (228), Expect = 9e-24
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK--NIHTYKLDVSNRE 67
TG+ NGIGR A F Q + + ET+Q++ + G +++ DV+ +
Sbjct: 12 TGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTED 71
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPL----NEQKPDVIRKTFDVNV 114
++ + K+ G++ +LVNNAG +Q D+ KT +N+
Sbjct: 72 GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 91.1 bits (227), Expect = 1e-23
Identities = 32/111 (28%), Positives = 55/111 (49%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG ++A+ F LV D + ++ L EQ ++HT +D++ +
Sbjct: 26 TGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAP 85
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+A + + G + +LVNNAGI +P+ + P + T VN+ A +
Sbjct: 86 AELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALL 136
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 91.0 bits (227), Expect = 1e-23
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
T + +GIG +A++ Q +V ++ + T L+ +G + V E+
Sbjct: 20 TASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS-VTGTVCHVGKAEDR 78
Query: 70 LRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNVLAHFW 119
R+ G V ILV+NA + P + + +V K VNV A
Sbjct: 79 ERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVL 129
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 91.1 bits (227), Expect = 1e-23
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 2/112 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG + ++ + +EK +E ++ E+G + D+ +R E
Sbjct: 27 TGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN-VEGSVCDLLSRTER 85
Query: 70 LRVADKVRKEV-GEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
++ V G++ ILVNNAG++ K + N A + +
Sbjct: 86 DKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHL 137
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding,
structural genomics, PSI-biology; HET: MSE; 2.10A
{Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 90.7 bits (226), Expect = 1e-23
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG+ GIGR A+ +V+ T+ DID + + E G ++DV+ ++ +
Sbjct: 14 TGSARGIGRAFAEAYVREGATVAIADIDIERARQA---AAEIGPAAY-AVQMDVTRQDSI 69
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
+ G + ILVNNA + P+ E + K F +NV +
Sbjct: 70 DAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLF 119
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 89.9 bits (224), Expect = 3e-23
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 3 TNNPFQL-------TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN 55
+PF L TGA GIGR +A F + ++V D+ +G + + G K
Sbjct: 4 YESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK- 62
Query: 56 IHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 115
+ +V++ + V + G++T+LVNNAG KP + F +N+
Sbjct: 63 AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLF 121
Query: 116 AHFWV 120
+ F +
Sbjct: 122 SLFRL 126
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology,
NEW YORK structural genomi research consortium, nysgrc;
2.00A {Rhizobium etli}
Length = 277
Score = 89.9 bits (224), Expect = 3e-23
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG G+GIGR A+ F ++ +V D++E E G K ++DVS+ ++
Sbjct: 33 TGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV---ANEIGSK-AFGVRVDVSSAKDA 88
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+ +K + G V +LVNNAG + + + VNV
Sbjct: 89 ESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNV 133
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 89.5 bits (223), Expect = 3e-23
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG+G GIG+ A+ + +V DI+ + + + G I + +DVS+ E
Sbjct: 15 TGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI-SVAVDVSDPESA 73
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPC---KPLNEQKPDVIRKTFDVNV 114
+AD+ E G + LVNNA I L P+ +K VN+
Sbjct: 74 KAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNL 121
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 89.9 bits (224), Expect = 3e-23
Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 8/124 (6%)
Query: 5 NPFQL-------TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNI 56
P+ L TG +GIG + ++ + D + + L ++ +
Sbjct: 2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARL 61
Query: 57 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 116
DV + +V A+ + +G +ILVNNAG E + + + +
Sbjct: 62 FASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFS 121
Query: 117 HFWV 120
Sbjct: 122 VIHP 125
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 90.0 bits (224), Expect = 4e-23
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK-NIHTYKLDVSNREE 68
TGA GIG +A+ VQ + +V E + GY + Y+ D+SN E+
Sbjct: 38 TGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEED 97
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 116
+L + +R + V I +NNAG+ L + F+VNVLA
Sbjct: 98 ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLA 145
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP}
SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 89.5 bits (223), Expect = 4e-23
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG NGIGR +A++F + D+ E + + G + + T K DVS +V
Sbjct: 13 TGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRR-VLTVKCDVSQPGDV 69
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+V G ILVNNAGI P P +E + +KTF++NV
Sbjct: 70 EAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINV 114
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase,
short chain dehydrogenase/reductase, oxidoreductase;
HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB:
3ai2_A* 3ai1_A*
Length = 263
Score = 89.5 bits (223), Expect = 4e-23
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG+ +GIG +A+ F + +V +E + L+E+ + +DV+ E V
Sbjct: 13 TGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGV 72
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
V + VR G ILVNNAG + + E + + +++ V+A
Sbjct: 73 DAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVR 122
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Length = 280
Score = 89.9 bits (224), Expect = 5e-23
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA +GIGR A F + +V + E + G + DV +
Sbjct: 14 TGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE-AAALAGDVGDEALH 72
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNV 114
+ + + G + NNAG + ++ + R+T D N+
Sbjct: 73 EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNL 118
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 88.7 bits (221), Expect = 5e-23
Identities = 31/115 (26%), Positives = 50/115 (43%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG +A+ + L + L ++ + + LDVS E V
Sbjct: 8 TGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESV 67
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
+ KV + G+V ++V NAG+ K L E + + +VN+L + L F
Sbjct: 68 EEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 89.6 bits (223), Expect = 8e-23
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK--NIHTYKLDVSNRE 67
TG+ NGIGR A F + + +E ETKQ + + G I+ DV+
Sbjct: 32 TGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEAS 91
Query: 68 EVLRVADKVRKEVGEVTILVNNAGI--MPCKPLNEQKPDVIRKTFDVNVLAHFW 119
+ + + G++ ILVNNAG +Q ++ +KTF +N A
Sbjct: 92 GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIE 145
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33;
1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A*
3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 89.0 bits (221), Expect = 1e-22
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Query: 10 TGAGNGIGRELAKQFVQ---HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNR 66
TG GIG + + + V L D+ +G Q L+ +G + ++LD+ +
Sbjct: 10 TGGNKGIGLAIVRDLCRLFSGDVVLTARDV-TRGQ-AAVQQLQAEG-LSPRFHQLDIDDL 66
Query: 67 EEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
+ + + D +RKE G + +LVNNAGI T N V
Sbjct: 67 QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 124
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 88.4 bits (220), Expect = 1e-22
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQG--YKNIHTYKLDVSNRE 67
TGA GIG +A +V ++ + + + LD+++
Sbjct: 13 TGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCT 72
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
+ + ++ G V ILVN A + L + D RK ++NV+A + +L
Sbjct: 73 KADTEIKDIHQKYGAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTV 128
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 88.3 bits (220), Expect = 1e-22
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNET-KQMLEEQGYKNIHTYKLDVSNREE 68
TGA +G G +A +F+ + D+ + ET + K + + DV++ +
Sbjct: 8 TGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADK-VLRVRADVADEGD 66
Query: 69 VLRVADKVRKEVGEVTILVNNAGIM---PCKPLNEQKPDVIRKTFDVNV 114
V ++ G + +LVNNAGI L+ + K VNV
Sbjct: 67 VNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNV 115
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 88.4 bits (220), Expect = 1e-22
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG +GIG + V++ +V +DEK + K+DV+N EEV
Sbjct: 20 TGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF-----------KIDVTNEEEV 68
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+K K+ G + ILVNNAGI PL+ ++ R+ DVNV
Sbjct: 69 KEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNV 113
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to pseudotropine;
HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2
PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 87.5 bits (218), Expect = 2e-22
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG + ++ ++ ++K N+ +G+K + D+S+R E
Sbjct: 15 TGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCDLSSRSER 73
Query: 70 LRVADKVRKE-VGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ + V G++ ILVNNAGI+ K + + +N A + +
Sbjct: 74 QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHL 125
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 87.2 bits (217), Expect = 2e-22
Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
T A GIG+ A F + ++ DI+E E ++ I T LDV+ ++++
Sbjct: 12 TAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP------GIQTRVLDVTKKKQI 65
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
+ A+ EV + +L N AG + + + + + ++NV + + ++ F
Sbjct: 66 DQFAN----EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAF 116
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics; 1.95A
{Mycobacterium smegmatis}
Length = 266
Score = 87.6 bits (218), Expect = 3e-22
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 10 TGA-GNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
T A G GIG A++ + +V D E+ ET+ L + G + DV++ E
Sbjct: 28 TAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEA 87
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 113
V + + ++ G + +LVNNAG+ P+ + + + +V
Sbjct: 88 VDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVT 132
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 87.2 bits (217), Expect = 3e-22
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIGR +A F + + + L++ G + + DVS+R +
Sbjct: 16 TGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQC 75
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+A + +E G + ++ NAG+ P PL P+ + F VNV F+
Sbjct: 76 DALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYA 126
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 87.3 bits (217), Expect = 4e-22
Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 1/115 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG G G+GR +A+ ++V + + + + DV + ++V
Sbjct: 39 TGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQV 98
Query: 70 LRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLAHFWVLAH 123
+ VR E + +LVNNAG +P PL E + N+ F H
Sbjct: 99 AALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQH 153
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET:
CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB:
2hsd_A*
Length = 254
Score = 86.8 bits (216), Expect = 5e-22
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG G+G E A+Q V +V D+ ++ E E G LDV+ E+
Sbjct: 11 TGGARGLGAEAARQAVAAGARVVLADVLDE---EGAATARELGDA-ARYQHLDVTIEEDW 66
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
RV R+E G V LVNNAGI L + + RK ++N+
Sbjct: 67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINL 111
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 86.8 bits (216), Expect = 5e-22
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG+G G +AK+F + +V D D+ G + + D+S +V
Sbjct: 15 TGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAA----LAVAADISKEADV 70
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
+ + G+V ILVNNAGI + +P+ + VNV + + +
Sbjct: 71 DAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKL 126
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET: NAD;
1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 86.4 bits (215), Expect = 5e-22
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIGR +A+ F + + D+ +G E + + ++ +D+ + E
Sbjct: 12 TGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGAFFQ------VDLEDERER 64
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+R ++ +G V +LVNNA I + R+ +VN+
Sbjct: 65 VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNL 109
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase;
ssgcid, decode, niaid, UWPPG, SBRI, structural genomics;
2.45A {Mycobacterium tuberculosis}
Length = 277
Score = 86.8 bits (216), Expect = 7e-22
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG GIG +A++ ++C DID + + G ++DVS+ +++
Sbjct: 35 TGAGAGIGLAVARRLADEGCHVLCADIDGDAADAA---ATKIGCG-AAACRVDVSDEQQI 90
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+ + D G V LV NAG++ L + + + +N+
Sbjct: 91 IAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINL 135
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 86.4 bits (215), Expect = 7e-22
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG G GIG + + FV +V D DE G +Q L + DV+ ++V
Sbjct: 15 TGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF-----ILCDVTQEDDV 69
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFW 119
+ + + G + +VNNAG P + E R+ ++N+L +
Sbjct: 70 KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYT 120
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 86.1 bits (214), Expect = 8e-22
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG +A++ +V D + ++ + G + ++ D+S+ + +
Sbjct: 35 TGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGE-AESHACDLSHSDAI 93
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPC-KPLNEQKPDVIRKTFDVNVLAHFWVLAH 123
A V G +LVNNAG+ PL+ KP VN+ A + +L
Sbjct: 94 AAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRA 148
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 86.0 bits (214), Expect = 9e-22
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG +G+G E+ K + + DI+E + E G + DVS+ +
Sbjct: 12 TGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQL---AAELGE-RSMFVRHDVSSEADW 67
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
V V++ +G + +LVNNAGI+ + + + + +N + F
Sbjct: 68 TLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFI 117
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 86.5 bits (215), Expect = 9e-22
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG +GIGR A + + V + +E+ + K ++EE G K D+S+
Sbjct: 55 TGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRK-AVLLPGDLSDES 113
Query: 68 EVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ K R+ +G + IL AG + + + ++TF VNV A FW+
Sbjct: 114 FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWI 167
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 86.1 bits (214), Expect = 9e-22
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TG GIG + + T+++ +E G K Y+ DVSN +
Sbjct: 20 TGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK-TKAYQCDVSNTDI 78
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
V + ++ ++G ++ L+ NAG+ KP E + +DVNV F
Sbjct: 79 VTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNT 130
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 86.1 bits (214), Expect = 9e-22
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIGR +A++FV ++ I + G + + DV+N ++V
Sbjct: 14 TGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY------------DHIECDVTNPDQV 61
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
D + KE G +++LVNNAGI + R+ DVN+
Sbjct: 62 KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNL 106
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 86.1 bits (214), Expect = 1e-21
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA +GIG AK+FV + + + E G + D +N E+
Sbjct: 35 TGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI---AEIG-GGAVGIQADSANLAEL 90
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
R+ +KV+ E G + +L NAG PL E + TFD NV
Sbjct: 91 DRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVL 139
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center
for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 85.6 bits (213), Expect = 1e-21
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG +G+G+ +A +F + +V ++ E K +E+ + I T ++DV N +++
Sbjct: 12 TGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ-ILTVQMDVRNTDDI 70
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
++ +++ ++ G + IL+NNA P + + ++ + F+
Sbjct: 71 QKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB:
2q45_A
Length = 266
Score = 85.6 bits (213), Expect = 1e-21
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG + ++F + +E NE +++G++ + D S R E
Sbjct: 20 TGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCDASLRPER 78
Query: 70 LRVADKVRKEVG-EVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
++ V G ++ IL+NN G + KP + + N+ + + +
Sbjct: 79 EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHL 130
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 85.6 bits (213), Expect = 1e-21
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
+G G+G + V +V DI ++ L + LDV+ +
Sbjct: 13 SGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAA----RYVHLDVTQPAQW 68
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
D G + +LVNNAGI+ + + ++ DVN+
Sbjct: 69 KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNL 113
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 85.5 bits (212), Expect = 2e-21
Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 12/124 (9%)
Query: 10 TGAGNGIGRELAKQFVQ-----HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVS 64
TG G+G L K + + C + + E + + + + NIH ++D+
Sbjct: 27 TGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE--QAKELEDLAKN--HSNIHILEIDLR 82
Query: 65 NREEVLRVADKVRKEVGEVTI--LVNNAGIMPC-KPLNEQKPDVIRKTFDVNVLAHFWVL 121
N + ++ + + + L NNAGI P + + + T N + +
Sbjct: 83 NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLA 142
Query: 122 AHFW 125
Sbjct: 143 KACL 146
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 84.7 bits (210), Expect = 2e-21
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 14/112 (12%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
G +G E+ K F + D E N + H++ + S EE+
Sbjct: 28 LGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-------------HSFTIKDSGEEEI 74
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFWV 120
V +K+ + +V V AG +++ ++ D+N+ + F
Sbjct: 75 KSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFAS 126
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 84.7 bits (210), Expect = 2e-21
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 10 TGAGNGIGRELAKQFVQ----HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN 65
TGA GIG L +Q V+ + + E L+ +H L V+
Sbjct: 9 TGANRGIGLGLVQQLVKDKNIRHIIATA------RDVEKATELKSIKDSRVHVLPLTVTC 62
Query: 66 REEVLRVADKVRKEVGEVTI--LVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFWVLA 122
+ + KV + VG + L+NNAG++ E VI + DVN + +
Sbjct: 63 DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122
Query: 123 HFW 125
Sbjct: 123 KLL 125
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 84.9 bits (211), Expect = 3e-21
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG AK FV++ +V DI + + + I DV+ E+V
Sbjct: 22 TGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKDEDV 79
Query: 70 LRVADKVRKEVGEVTILVNNAGIMP--CKPLNEQKPDVIRKTFDVNVLAHFW 119
+ D + G++ I+ N G++ + E + ++ D+NV F
Sbjct: 80 RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 84.2 bits (209), Expect = 3e-21
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 10 TGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETK-QMLEEQGYKNIHTYKLDVSNR 66
TGA +G+G ELAK + L G +E+K + N+ D+++
Sbjct: 7 TGASSGLGAELAKLYDAEGKATYLT-------GRSESKLSTVTNCLSNNVGYRARDLASH 59
Query: 67 EEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 116
+EV ++ +++ + +V++AG L EQ P+ I+ + N+ +
Sbjct: 60 QEVEQLFEQLD---SIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSS 106
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 84.2 bits (209), Expect = 3e-21
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 8/121 (6%)
Query: 10 TGAGNGIGRELAKQFVQH-------KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLD 62
TGAG GIGR +A +F + + LV + +G T D
Sbjct: 8 TGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGAL-TDTITAD 66
Query: 63 VSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLA 122
+S+ +V R+ + + G + LVNNAG+ L++ + T + N+ F++
Sbjct: 67 ISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQ 126
Query: 123 H 123
Sbjct: 127 A 127
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 84.5 bits (210), Expect = 3e-21
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 4 NNPFQL-------TGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKN 55
F L TG G+G +A+ + ++V + E+ + +++ E+ G +
Sbjct: 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE- 72
Query: 56 IHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 115
++ DVSN EEV ++ + V+++ G++ +VN AGI P E D R+ +VN+
Sbjct: 73 TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLF 132
Query: 116 AHFWV 120
++V
Sbjct: 133 GTYYV 137
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 84.1 bits (209), Expect = 4e-21
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG+ G+G+ +A +F KV +V + E N + +++ G + I K DV+
Sbjct: 13 TGSSTGLGKSMAIRFATEKAKV-VVNYRSKEDEANSVLEEIKKVGGEAI-AVKGDVTVES 70
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
+V+ + KE G++ +++NNAG+ +E K D N+ F
Sbjct: 71 DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAF 121
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 84.5 bits (210), Expect = 5e-21
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 6/107 (5%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG E ++ + +V D+ E + G + +D++N V
Sbjct: 17 TGACGGIGLETSRVLARAGARVVLADLPET---DLAGAAASVGRG-AVHHVVDLTNEVSV 72
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCK--PLNEQKPDVIRKTFDVNV 114
+ D G + I+ NNA + + DV TF VN
Sbjct: 73 RALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNA 119
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the
center for structural genomics of I diseases, csgid,
niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 83.3 bits (207), Expect = 8e-21
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG GIG+ + + +Q+ ++ DI + + E N+ K D++ ++
Sbjct: 10 TGGSKGIGKAVVELLLQNKNHT-VINIDIQQSFSAE-----------NLKFIKADLTKQQ 57
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
++ V D ++ + NAGI+ + + + I+K D+NV
Sbjct: 58 DITNVLDIIKN--VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNV 102
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative, EFI,
oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae}
Length = 273
Score = 83.8 bits (208), Expect = 9e-21
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 10/123 (8%)
Query: 5 NPFQL-------TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIH 57
PF L TGAG+GIGR +A + + ++ W + E + + G
Sbjct: 25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGS-AE 82
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAH 117
D+++ E VA+++ V +LVNNAGI+ P E R+ VN+ A
Sbjct: 83 AVVADLADLEGAANVAEEL-AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAA 141
Query: 118 FWV 120
+ +
Sbjct: 142 WVL 144
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 83.4 bits (207), Expect = 9e-21
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG +A++ ++ + + + G LDV++R V
Sbjct: 10 TGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGT-ALAQVLDVTDRHSV 68
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 115
A G + +LVNNAG+MP PL K D + DVN+
Sbjct: 69 AAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIK 114
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 83.4 bits (207), Expect = 1e-20
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 9/124 (7%)
Query: 4 NNPFQL-------TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI 56
+ F L TG GIG+ +A+ ++ + D + +T L G +
Sbjct: 22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DC 79
Query: 57 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLA 116
D+S+ R+A + + + ILVNNAG L K +NV +
Sbjct: 80 QAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTS 139
Query: 117 HFWV 120
F
Sbjct: 140 VFSC 143
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 81.8 bits (203), Expect = 1e-20
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 14/117 (11%)
Query: 9 LTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEE-QGYKNIHTYKLDVSNRE 67
+TGA G+G A+ H + L L E D+++
Sbjct: 5 ITGATGGLGGAFARALKGHDLLLSGRRAGA---------LAELAREVGARALPADLADEL 55
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
E + + E G + +LV+ G + E D++ + ++L +VL H
Sbjct: 56 EAKALLE----EAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA 108
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 83.0 bits (206), Expect = 1e-20
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 14/118 (11%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN-------------ETKQMLEEQGYKNI 56
TGA G GR A + ++ DI K + ET +++E + I
Sbjct: 17 TGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRR-I 75
Query: 57 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+D + + + +V D +G + I+V NAG+ + ++ P+ R D+NV
Sbjct: 76 VAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINV 133
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 82.6 bits (205), Expect = 1e-20
Identities = 23/113 (20%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG+ G+G+ A + ++ + ++ + +K ET + +E+ G K + K +V
Sbjct: 10 TGSSRGVGKAAAIRLAENGYNI-VINYARSKKAALETAEEIEKLGVKVL-VVKANVGQPA 67
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
++ + ++ + G + + VNNA +P+ E + T ++N A +
Sbjct: 68 KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 83.4 bits (207), Expect = 2e-20
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIGR +A F + + + + L E G N+ +LDVS+
Sbjct: 47 TGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSC 106
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
A V G + ++ NAGI
Sbjct: 107 ADAARTVVDAFGALDVVCANAGI 129
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis}
PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 83.0 bits (206), Expect = 2e-20
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG +A + + T+V DI+++ + + G H Y DV++ + +
Sbjct: 40 TGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGIN-AHGYVCDVTDEDGI 98
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
+ ++ EVG + ILVNNAGI+ P+ E R+ D+++ A F
Sbjct: 99 QAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPF 147
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 81.8 bits (203), Expect = 3e-20
Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG G+GIG+++ F++ + DIDEK + + + N+ + DV++ +
Sbjct: 8 TGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-----PNLFYFHGDVADPLTL 62
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 113
+ + +++ + +LVNNA L+ + V
Sbjct: 63 KKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVG 106
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 82.3 bits (204), Expect = 3e-20
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK-NIHTYKLDVSNREE 68
TGA GIGR A+ + + D + + + K L EQ + DV+++++
Sbjct: 13 TGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQ 72
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+ KV G + ILVNNAG+ KT +N+
Sbjct: 73 LRDTFRKVVDHFGRLDILVNNAGVN--------NEKNWEKTLQINL 110
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 81.9 bits (203), Expect = 4e-20
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA +GIG E+A++ + + + E+G T + L E G + DV + E+
Sbjct: 28 TGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADGRTCDVRSVPEI 86
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
+ V + G V +LVNNAG
Sbjct: 87 EALVAAVVERYGPVDVLVNNAGR 109
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Length = 255
Score = 81.4 bits (202), Expect = 4e-20
Identities = 21/109 (19%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
G +G+G ++ V+ ++ +E ++ EE G +H + D+++ E+
Sbjct: 14 IGGTHGMGLATVRRLVEGGAEVLLTGRNES---NIARIREEFG-PRVHALRSDIADLNEI 69
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
+ + +G + +L NAG+ +P ++ + F VN F
Sbjct: 70 AVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAF 118
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 81.4 bits (202), Expect = 4e-20
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLV---CWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNR 66
G +G AK F V LV D N+ K LE+QG K Y+ D+SN
Sbjct: 17 AGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVA-LYQSDLSNE 75
Query: 67 EEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
EEV ++ D KE G+V I +N G + KP+ E +N ++ +
Sbjct: 76 EEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFI 130
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 81.4 bits (202), Expect = 5e-20
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 3/114 (2%)
Query: 10 TGAGN--GIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKLDVSNR 66
TGA G+G E A+ + + +G E + LE+ YK V +
Sbjct: 26 TGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSY 85
Query: 67 EEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
E ++ V + G++ + NAG + + + V++ F
Sbjct: 86 ESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHC 139
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 81.8 bits (203), Expect = 5e-20
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI-------------DEKGNNETKQMLEEQGYKNI 56
TGA G GR A + ++ DI + +ET +++E+QG K
Sbjct: 21 TGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRK-A 79
Query: 57 HTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
T LDV + + + ++ G + ++V NAG++ + E + VN+
Sbjct: 80 LTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNL 137
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 81.5 bits (202), Expect = 5e-20
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 11/108 (10%)
Query: 10 TGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TGA +GIG +A++F + H + L+ + L+ N ++DV+++
Sbjct: 22 TGASSGIGEAIARRFSEEGHPLLLL-------ARRVER--LKALNLPNTLCAQVDVTDKY 72
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 115
+ K G +VNNAG+M ++ Q+ + ++ FDVNVL
Sbjct: 73 TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVL 120
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 81.5 bits (202), Expect = 5e-20
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG +GIG +A+ + + D K + L G+ + DV++ +EV
Sbjct: 30 TGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCDVTSTDEV 88
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
+ G + ILVN+AG
Sbjct: 89 HAAVAAAVERFGPIGILVNSAGR 111
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase,
lactamase inhibitor, AN biosynthesis, NADPH,
oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces
clavuligerus} PDB: 2jap_A*
Length = 247
Score = 81.0 bits (201), Expect = 6e-20
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA +GIG A+ + + L G K +H +LDV++R+ V
Sbjct: 13 TGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAK-VHVLELDVADRQGV 71
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVL 115
+ +G + ILVNNAGIM P+ + + D N+L
Sbjct: 72 DAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLL 117
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 80.6 bits (200), Expect = 8e-20
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 9/111 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG GIGR + +V + + + I +D+ + E
Sbjct: 13 TGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----PGIEPVCVDLGDWEAT 67
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
R VG V +LVNNA + +P E + ++F+VN+ A V
Sbjct: 68 ERALG----SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 81.1 bits (201), Expect = 8e-20
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG +G+GR L +FV + D + +++ G N DV + ++
Sbjct: 11 TGGASGLGRALVDRFVAEGARVAVLDKSAE---RLRELEVAHG-GNAVGVVGDVRSLQDQ 66
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFD----VNVLAHF 118
R A++ G++ L+ NAGI L + D I FD VNV +
Sbjct: 67 KRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYI 120
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 81.5 bits (202), Expect = 8e-20
Identities = 22/111 (19%), Positives = 40/111 (36%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG G G+G+ + V T + + Q +H + DV + + V
Sbjct: 32 TGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMV 91
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
++ K G I++NNA P P+ + D+ + +V
Sbjct: 92 QNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFV 142
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta;
rossman fold, structural genomics, NPPSFA; 2.40A
{Thermus thermophilus}
Length = 234
Score = 80.3 bits (199), Expect = 9e-20
Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 5/115 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG A+ + DEK LE DV +
Sbjct: 11 TGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPGDVREEGDW 65
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
R + + GE++ LVNNAG+ KP++E + R D N+ F + H
Sbjct: 66 ARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 80.7 bits (200), Expect = 9e-20
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TG+ GIG A+ F + + +ET + G + D++ E
Sbjct: 13 TGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGD-AAFFAADLATSEA 71
Query: 69 VLRVADKVRKEVGEVTILVNNAG-IMPCKPLNEQKPDVIRKTFDVNVLAHF 118
++ D+ + G + +L+NNAG ++ KPL E D N+ +
Sbjct: 72 CQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta
protein, NAD(P)-binding rossmann fold, csgid,
oxidoreductase; 1.95A {Francisella tularensis subsp}
Length = 247
Score = 80.2 bits (199), Expect = 1e-19
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG E+A T+V + + + ++E+G+K L++S+ E +
Sbjct: 11 TGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFK-ARGLVLNISDIESI 69
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
+++ E + ILVNNAGI
Sbjct: 70 QNFFAEIKAENLAIDILVNNAGI 92
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 80.4 bits (199), Expect = 1e-19
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 10 TGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG GIG+ + + E + K E+ G D++
Sbjct: 8 TGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLK---EKYG-DRFFYVVGDITEDS 63
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHF 118
+ ++ + K G++ LV NAG++ P + +NE + +K +D+N +
Sbjct: 64 VLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIV 115
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 80.7 bits (200), Expect = 1e-19
Identities = 23/111 (20%), Positives = 35/111 (31%), Gaps = 12/111 (10%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG + + D G D+
Sbjct: 34 TGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------------LHLPGDLREAAYA 81
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ V +G + I+VNNAG++ + E + VNV A F +
Sbjct: 82 DGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRI 132
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics of
infectious diseases; HET: NAD; 2.05A {Bacillus anthracis
str} PDB: 3i3o_A*
Length = 291
Score = 81.0 bits (201), Expect = 1e-19
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG +GIGR ++ F + + + D + N ETKQ +E++G K D+S+ +
Sbjct: 53 TGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDAN-ETKQYVEKEGVK-CVLLPGDLSDEQ 110
Query: 68 EVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ + +++G + ILVNN P + L + + KTF +N+ ++F V
Sbjct: 111 HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHV 164
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB:
2wdz_A* 3lqf_A*
Length = 254
Score = 80.2 bits (199), Expect = 1e-19
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG+GIG E+ + F L+ D + + Q L DV++ E +
Sbjct: 17 TGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVA---ARIVADVTDAEAM 73
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
A + + V V+ILVN+AGI E R+ VNV FW
Sbjct: 74 TAAAAEA-EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 80.7 bits (200), Expect = 1e-19
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG GIGRE+AK + ++C +K + ++ GY+ Y DVS +EE+
Sbjct: 50 TGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE-SSGYAGDVSKKEEI 108
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
V +K+ E V ILVNNAGI
Sbjct: 109 SEVINKILTEHKNVDILVNNAGI 131
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA;
1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 80.8 bits (200), Expect = 1e-19
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TG G+GIG +A+ F++H V + +++ G + +DV
Sbjct: 33 TGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRR-CLPLSMDVRAPPA 91
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
V+ D+ KE G + IL+N A P + + D++ F V
Sbjct: 92 VMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNV 143
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A {Burkholderia
pseudomallei}
Length = 270
Score = 80.3 bits (199), Expect = 1e-19
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIGR +A + + ++ E G ++ G + L+V++ V
Sbjct: 34 TGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE-GRGAVLNVNDATAV 92
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
+ + KE G + +LVNNAGI
Sbjct: 93 DALVESTLKEFGALNVLVNNAGI 115
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 80.0 bits (198), Expect = 2e-19
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 9/117 (7%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIGR +A Q + T+ Q + G + + D S EV
Sbjct: 11 TGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCV-PVVCDSSQESEV 69
Query: 70 LRVADKVRKEV-GEVTILVNNAGIMPC-------KPLNEQKPDVIRKTFDVNVLAHF 118
+ ++V +E G + +LVNNA K E + +V + H+
Sbjct: 70 RSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHY 126
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 79.9 bits (198), Expect = 2e-19
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
GAG IGR A +F Q V ++ ++ +G +E+ G + K D++N
Sbjct: 14 AGAGRDIGRACAIRFAQEGANV-VLTYNGAAEGAATAVAEIEKLGRSAL-AIKADLTNAA 71
Query: 68 EVLRVADKVRKEVGEVTILVNNAG-IMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
EV + GE+ LV+ AG ++ K + E + DVN+ + F
Sbjct: 72 EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLT 125
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 80.4 bits (199), Expect = 2e-19
Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG+G+GR +A + ET + + DV++ + V
Sbjct: 34 TGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDA----LCVPTDVTDPDSV 89
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHFWVLAH 123
+ ++ G V +L NNAG P P+ + ++ D N+ F
Sbjct: 90 RALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQE 144
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 79.9 bits (198), Expect = 2e-19
Identities = 16/111 (14%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGY-KNIHTYKLDVSNREE 68
T +G+G A + ++ L+ + + + + + D+ +
Sbjct: 13 TAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGD 72
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
+ R+ +K R ++G ILV + G E + +++ + + W
Sbjct: 73 IDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVW 122
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural
genomics, secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 79.1 bits (196), Expect = 3e-19
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLV-CWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TGA GIGR +A + + L + + + E + +G + ++ E
Sbjct: 7 TGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEA 66
Query: 69 VLRVADKVRKEVGEVTILVNNAGI 92
+ + + +G + LVNNAGI
Sbjct: 67 ATALVHQAAEVLGGLDTLVNNAGI 90
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics,
protein structure initiati nysgrc,oxidoreductase; 2.00A
{Rhizobium etli}
Length = 272
Score = 79.5 bits (197), Expect = 3e-19
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 10 TGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG GIG + + + +V V + + + + + E G + + DV N
Sbjct: 32 TGGSRGIGAAVCRLAARQGWRV-GVNYAANREAADAVVAAITESGGEAV-AIPGDVGNAA 89
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLAHF 118
++ + V ++ G + LVNNAGI+ + ++E + I + VNV
Sbjct: 90 DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSI 141
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 78.9 bits (195), Expect = 4e-19
Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 15/129 (11%)
Query: 10 TGAGNGIGRELAKQFVQ-----HKVTLVCWDIDEKGNNETKQMLEEQGYK-NIHTYKLDV 63
TGA G GR LA Q + + + E + K+ L Q + D+
Sbjct: 12 TGASRGFGRALAPQLARLLSPGSVMLVS--ARSESMLRQLKEELGAQQPDLKVVLAAADL 69
Query: 64 SNREEVLRVADKVRK----EVGEVTILVNNAGI---MPCKPLNEQKPDVIRKTFDVNVLA 116
V R+ VR+ E + +L+NNA + LN + + +N+ +
Sbjct: 70 GTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTS 129
Query: 117 HFWVLAHFW 125
+ +
Sbjct: 130 MLCLTSGTL 138
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 78.7 bits (195), Expect = 4e-19
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA +GIGR + F + LV DI+E E + + +DV++ V
Sbjct: 11 TGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV------MDVADPASV 64
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
R + +G + +V+ AGI
Sbjct: 65 ERGFAEALAHLGRLDGVVHYAGI 87
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium
loti} PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 78.7 bits (195), Expect = 4e-19
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG+ +A + T++ DI+ +G K G K D+S+ V
Sbjct: 12 TGAAQGIGKAIAARLAADGATVIVSDINAEG---AKAAAASIGKK-ARAIAADISDPGSV 67
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
+ +++ G + ILVNNA I
Sbjct: 68 KALFAEIQALTGGIDILVNNASI 90
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A*
1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 78.9 bits (195), Expect = 4e-19
Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVS-NREE 68
A GIG + +++ V+ + + ++ NI + DV+ E
Sbjct: 11 VAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAE 70
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
++ K+ ++ V IL+N AGI+ I +T +N
Sbjct: 71 SKKLLKKIFDQLKTVDILINGAGIL--------DDHQIERTIAINFTGLV 112
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 78.8 bits (195), Expect = 5e-19
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNI------HTYKLDV 63
TGAG+GIGR ++ + T+ D+D ET ++L G K ++ DV
Sbjct: 13 TGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV 72
Query: 64 SNREEVLRVADKVRKEVGE-VTILVNNAGI 92
S + ++V+ +++V+ AGI
Sbjct: 73 SEARAARCLLEQVQACFSRPPSVVVSCAGI 102
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 78.8 bits (195), Expect = 6e-19
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 15/117 (12%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLEEQGYKNIH 57
TG G GR A + + ++ +DI E +E+ G K +
Sbjct: 16 TGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRK-AY 74
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
T ++DV +R V R E G++ ++V NAGI C FDV+
Sbjct: 75 TAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI--CPLGAHLPVQAFADAFDVDF 129
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 78.8 bits (195), Expect = 7e-19
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN----------------NETKQMLEEQGY 53
TGA G GR A + Q ++ DI + ET +++
Sbjct: 17 TGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNR 76
Query: 54 KNIHTYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDV 112
+ I T ++DV + + + D +++G + I+V NAGI L++ + + D+
Sbjct: 77 R-IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDI 135
Query: 113 NV 114
N+
Sbjct: 136 NL 137
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 78.4 bits (194), Expect = 7e-19
Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
T + G A + + T+ C D K +E + E +L + +E
Sbjct: 7 TNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------YPQLKPMSEQEP 59
Query: 70 LRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ + V G+V +LV+N P +P+++ + R + + F +
Sbjct: 60 AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFAL 111
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 78.0 bits (193), Expect = 8e-19
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG+ +GIG +A+ + +V + + G K + D+S+ ++
Sbjct: 10 TGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVK-AVHHPADLSDVAQI 66
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
+ +E G V ILVNNAGI P+ + + K +N+ A F
Sbjct: 67 EALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVF 115
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 78.0 bits (193), Expect = 1e-18
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TGA GIG +A + V ++ + E +E G K + T + DVS+
Sbjct: 33 TGASRGIGAAIAARLASDGFTV-VINYAGKAAAAEEVAGKIEAAGGKAL-TAQADVSDPA 90
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
V R+ + G V +LVNNAGIMP + E V + VN+ F
Sbjct: 91 AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTF 141
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 78.4 bits (194), Expect = 1e-18
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLEEQGYKNIH 57
TGA G GR A + ++ D+ ++ + ET + +E G + I
Sbjct: 34 TGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRR-II 92
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMP-CKPLNEQKPDVIRKTFDVNV 114
++DV + + + D ++G + I++ NA + LN P R DVN+
Sbjct: 93 ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNL 150
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty
acid synthesis, short-chain dehydrogenases/reductases,
structural genomics; HET: ADE; 1.90A {Homo sapiens}
SCOP: c.2.1.2
Length = 303
Score = 78.5 bits (194), Expect = 1e-18
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 4/115 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKN----IHTYKLDVSN 65
TG GIG+ + K+ ++ +V + L+ + + ++ N
Sbjct: 24 TGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN 83
Query: 66 REEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
EEV + G++ LVNN G P + N+ F++
Sbjct: 84 EEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 138
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 78.4 bits (194), Expect = 1e-18
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 13/116 (11%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLEEQGYKNIH 57
TGA G GR A + Q +V D+ + N ET +++EEQG + I
Sbjct: 52 TGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR-II 110
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 113
+ DV + + V D+ E G + ILV+N GI + N
Sbjct: 111 ARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTN 166
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A
{Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 77.6 bits (192), Expect = 1e-18
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TGAG GIGR +A + + V +V + K E L++ G + + + D+S
Sbjct: 27 TGAGRGIGRGIAIELGRRGASV-VVNYGSSSKAAEEVVAELKKLGAQGV-AIQADISKPS 84
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
EV+ + DK G + +++N+G+ E ++ K F++N F+V
Sbjct: 85 EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 138
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 78.2 bits (193), Expect = 2e-18
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 10 TGAGNGIGRELAKQFVQ--HKV--TLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN 65
TGA +G GR A+ H+V ++ N E ++ T +LDV +
Sbjct: 11 TGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS 70
Query: 66 REEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ V R D++ E G + +L++NAG M P P+ + +D+NVL+ V
Sbjct: 71 QVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 77.7 bits (192), Expect = 2e-18
Identities = 22/111 (19%), Positives = 47/111 (42%), Gaps = 3/111 (2%)
Query: 10 TGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG+ +GIG +A+ + + L + ++ T ++ + + D++
Sbjct: 31 TGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGT-VLHHPADMTKPS 89
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
E+ + V G ILVNNAG+ + + + + + VN+ + F
Sbjct: 90 EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 77.2 bits (191), Expect = 2e-18
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA +GIGR F + +LV D +E+ E LE + DVS+ + V
Sbjct: 12 TGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEA----IAVVADVSDPKAV 67
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 113
V + +E G + + + AG+ + K VN
Sbjct: 68 EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVN 111
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea}
SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 77.3 bits (191), Expect = 2e-18
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TGAG GIGRE+A + + KV +V + + E +++ G K +V E
Sbjct: 35 TGAGRGIGREMAMELGRRGCKV-IVNYANSTESAEEVVAAIKKNGSDAA-CVKANVGVVE 92
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
+++R+ ++ K G++ I+ +N+G++ + + P+ + F +N F+V
Sbjct: 93 DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVA 146
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET:
NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 76.8 bits (190), Expect = 2e-18
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG GIGR+ K +V L ++ I +D+ + +
Sbjct: 13 TGAGKGIGRDTVKALHASGAKVVAVTRTN----SDLVSLAKEC-PGIEPVCVDLGDWDAT 67
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ +G V +LVNNA ++ +P E + ++F VN+ + F V
Sbjct: 68 EKALG----GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 114
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 76.8 bits (190), Expect = 2e-18
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGAG GIG A FV+ + +D ++ Y T +DV++ +V
Sbjct: 13 TGAGKGIGYATALAFVEAGAKVTGFDQA----------FTQEQYP-FATEVMDVADAAQV 61
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+V ++ E + LVN AGI+ ++ + ++TF VNV F +
Sbjct: 62 AQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 77.2 bits (191), Expect = 2e-18
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYK-NIHTYKLDVSNREE 68
TG+ GIG+ +A V ++ E+ NET + + Q + D+ +
Sbjct: 16 TGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQG 75
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
V ++ +V IL+NN GI + + K F+VN+++ + +
Sbjct: 76 C----QDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSY 127
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 76.8 bits (190), Expect = 3e-18
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG GIG +AK+ V + + + +E+ G + + + D + E
Sbjct: 37 TGGSRGIGAAIAKRLALEGAAV-ALTYVNAAERAQAVVSEIEQAGGRAV-AIRADNRDAE 94
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
+ + + + +G + ILVN+AGI PL E + VN A F +
Sbjct: 95 AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAI 148
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 76.5 bits (189), Expect = 3e-18
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 10 TGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG+ +GIG +A + L + + + + G K + D+S E
Sbjct: 10 TGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYDGADLSKGE 68
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
V + D +++G + ILVNNAGI + + + +N+ A F
Sbjct: 69 AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVF 119
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 76.4 bits (189), Expect = 3e-18
Identities = 19/83 (22%), Positives = 40/83 (48%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG+ GIGR +A++ T++ + + + + H ++++ + E +
Sbjct: 13 TGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESI 72
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
+ +++ V + ILVNNAGI
Sbjct: 73 NKAFEEIYNLVDGIDILVNNAGI 95
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold,
short-chain dehydrogenase/reducta ALLO-threonine
dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Length = 248
Score = 76.0 bits (188), Expect = 5e-18
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETK-QMLEEQGYKNIHTYKLDVSNREE 68
TGA G G + ++F+Q ++ G + + Q L+++ N++ +LDV NR
Sbjct: 6 TGATAGFGECITRRFIQQGHKVIAT-----GRRQERLQELKDELGDNLYIAQLDVRNRAA 60
Query: 69 VLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLA 116
+ + + E + ILVNNAG+ + +P ++ + D N
Sbjct: 61 IEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKG 109
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU
SDR, fungi, oxidoreductase; HET: GOL; 1.48A
{Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A*
3itd_A
Length = 270
Score = 76.5 bits (189), Expect = 5e-18
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG+G GIG +A + KV +V + K + ++ G I K D+
Sbjct: 24 TGSGRGIGAAVAVHLGRLGAKV-VVNYANSTKDAEKVVSEIKALGSDAI-AIKADIRQVP 81
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
E++++ D+ G + I V+N+G++ L + + + F +N F+V
Sbjct: 82 EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVA 135
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 76.5 bits (189), Expect = 5e-18
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA +G G A++F + +LV E+ L + + LDV +R +
Sbjct: 27 TGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT--RVLPLTLDVRDRAAM 84
Query: 70 LRVADKVRKEVGEVTILVNNAGIM-PCKPLNEQKPDVIRKTFDVNVLA 116
D + +E + L+NNAG+ P D D N+
Sbjct: 85 SAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKG 132
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK
structural genomi research consortium, nysgrc; 2.45A
{Sinorhizobium meliloti}
Length = 260
Score = 76.1 bits (188), Expect = 5e-18
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 10/109 (9%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG L + + +V K + + IHT D+S E
Sbjct: 34 TGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD----------IHTVAGDISKPETA 83
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
R+ + + G + LVNNAG+ KP E + VNV F
Sbjct: 84 DRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFF 132
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 76.9 bits (189), Expect = 5e-18
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 31/146 (21%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG E+ KQ + + +V D +E + L+ ++N+ ++LDV++
Sbjct: 18 TGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIAT 77
Query: 70 LR-VADKVRKEVGEVTILVNNAGIM------------------------------PCKPL 98
+ +AD ++ G++ ILVNNAG+ + L
Sbjct: 78 MSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQEL 137
Query: 99 NEQKPDVIRKTFDVNVLAHFWVLAHF 124
+ ++ + +N V
Sbjct: 138 MSETYELAEECLKINYNGVKSVTEVL 163
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics,
unknown function, oxidoreductase, PSI- 2; 2.40A
{Corynebacterium glutamicum}
Length = 245
Score = 75.7 bits (187), Expect = 5e-18
Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 10 TGAGNGIGRELAKQFVQ-HKVTLVCWDIDEKGNNETKQMLEE-QGYKNIHTYKLDVSNRE 67
TGA G+G E+ K + H V + G N L + + + D+
Sbjct: 11 TGATGGMGIEIVKDLSRDHIVYAL-------GRNPEH--LAALAEIEGVEPIESDIVKEV 61
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLA 122
DK+ K + V LV+ A + + D+NV+ +
Sbjct: 62 LEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSR 115
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: NAD; 2.10A {Mycobacterium
abscessus}
Length = 281
Score = 76.0 bits (188), Expect = 6e-18
Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 13/116 (11%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLEEQGYKNIH 57
TG G+GR A + + D E + ET ++E+ G +
Sbjct: 16 TGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR-CI 74
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVN 113
+ K+DV +R + + +G + I + NAGI L E + + N
Sbjct: 75 SAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTN 130
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 75.6 bits (187), Expect = 6e-18
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TG+ G+G+ +A + +V + T + + G + K DV N E+
Sbjct: 11 TGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGIN-VVVAKGDVKNPED 69
Query: 69 VLRVADKVRKEVGEVTILVNNAGI 92
V + G + ILVNNAGI
Sbjct: 70 VENMVKTAMDAFGRIDILVNNAGI 93
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 75.3 bits (186), Expect = 9e-18
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 10 TGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG GIG + ++ + +V + + + + + G+ + + +V + +
Sbjct: 19 TGGMGGIGTSICQRLHKDGFRV-VAGCGPNSPRRVKWLEDQKALGFD-FYASEGNVGDWD 76
Query: 68 EVLRVADKVRKEVGEVTILVNNAGI 92
+ DKV+ EVGE+ +LVNNAGI
Sbjct: 77 STKQAFDKVKAEVGEIDVLVNNAGI 101
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A
{Saccharomyces cerevisiae}
Length = 287
Score = 75.8 bits (187), Expect = 1e-17
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 10 TGAGNGIGRELAKQFVQH-----KVTLVCWDIDEKGNNETKQMLEEQGYK-NIHTYKLDV 63
TGA GIG+ A ++++ K+ L +++ E K+ ++++ +H +LD+
Sbjct: 39 TGASAGIGKATALEYLEASNGDMKLILAARRLEKL--EELKKTIDQEFPNAKVHVAQLDI 96
Query: 64 SNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLA 116
+ E++ + + +E ++ ILVNNAG + + + + I+ FD NV A
Sbjct: 97 TQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTA 150
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 74.8 bits (185), Expect = 1e-17
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG+ +A+ + ++ E G L + G L+V+N E +
Sbjct: 15 TGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG----KGMALNVTNPESI 70
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
V + E G V ILVNNAGI
Sbjct: 71 EAVLKAITDEFGGVDILVNNAGI 93
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 75.4 bits (186), Expect = 1e-17
Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 12/116 (10%)
Query: 10 TGAGNGIGRELAKQFVQ--HKV--TLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN 65
TGA +G GR +A+ V V T E L LDV++
Sbjct: 11 TGASSGFGRAIAEAAVAAGDTVIGTA--------RRTEALDDLVAAYPDRAEAISLDVTD 62
Query: 66 REEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
E + VA V G V +LVNNAG E +R F+++V +
Sbjct: 63 GERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLT 118
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 74.9 bits (185), Expect = 1e-17
Identities = 14/83 (16%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
T G+G+++ ++ + ++ D K+ ++ + + + DV+ +E+
Sbjct: 13 TAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEER-LQFVQADVTKKED 71
Query: 69 VLRVADKVRKEVGEVTILVNNAG 91
+ ++ ++ G++ L+NNAG
Sbjct: 72 LHKIVEEAMSHFGKIDFLINNAG 94
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 75.6 bits (186), Expect = 2e-17
Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 18/138 (13%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-------NETKQMLEEQGYKNIHTYKLD 62
TGA GIG+ +A + + +V + + + +E G K + +D
Sbjct: 51 TGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKAL-PCIVD 109
Query: 63 VSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW--- 119
V + +++ +K K+ G + ILVNNA + + + +VN +
Sbjct: 110 VRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASK 169
Query: 120 -VLAHF------WVSNLS 130
+ + + N+S
Sbjct: 170 ACIPYLKKSKVAHILNIS 187
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 74.5 bits (184), Expect = 2e-17
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TG GIG +A+ + I D +G L G + + + D+++
Sbjct: 35 TGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR-VIFLRADLADLSS 93
Query: 69 VLRVADKVRKEVGEVTILVNNAGI--MPCKPLNEQKPDVIRKTFDVNV 114
D V E G + LVNNAGI + + KP+ VN+
Sbjct: 94 HQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNL 141
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 74.5 bits (184), Expect = 2e-17
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 17/117 (14%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNN------------ETKQMLEEQGYKNIH 57
TGA G GR A + ++ D+ ++ + T +++E+ G + I
Sbjct: 19 TGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR-IV 77
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+ DV +RE + E+G + I+V NAGI P D DVN+
Sbjct: 78 ARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDDGWHDVIDVNL 130
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold,
rossmann fold, oxidoreductase; HET: NAP; 2.30A
{Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 73.7 bits (182), Expect = 4e-17
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TGA GIG+ +A + LV + K E + +E G + T+ DVS +
Sbjct: 7 TGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQ-AITFGGDVSKEAD 65
Query: 69 VLRVADKVRKEVGEVTILVNNAGI 92
V + G + ++VNNAGI
Sbjct: 66 VEAMMKTAIDAWGTIDVVVNNAGI 89
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus
anthracis}
Length = 246
Score = 73.3 bits (181), Expect = 4e-17
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI-DEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TGA GIGR +A + +V +E+ NE +++ G + DV+N E+
Sbjct: 10 TGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD-AIAVRADVANAED 68
Query: 69 VLRVADKVRKEVGEVTILVNNAGI 92
V + + G+V ILVNNAG+
Sbjct: 69 VTNMVKQTVDVFGQVDILVNNAGV 92
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A {Burkholderia
pseudomallei 1710B}
Length = 269
Score = 73.8 bits (182), Expect = 5e-17
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 10 TGAGNGIGRELAKQFVQ--HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG G+G ++++ V + + ++ + + G Y +DV++ E
Sbjct: 31 TGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVS-TWLMHERDAGRD-FKAYAVDVADFE 88
Query: 68 EVLRVADKVRKEVGEVTILVNNAGI 92
R A+KV + G+V +L+NNAGI
Sbjct: 89 SCERCAEKVLADFGKVDVLINNAGI 113
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 73.3 bits (181), Expect = 5e-17
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TGA GIGR +A Q + V + ++ + ++ +G + +V++ +E
Sbjct: 10 TGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD-SFAIQANVADADE 68
Query: 69 VLRVADKVRKEVGEVTILVNNAGI 92
V + +V + G + +LVNNAGI
Sbjct: 69 VKAMIKEVVSQFGSLDVLVNNAGI 92
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 73.0 bits (180), Expect = 7e-17
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 10 TGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TGA GIGR +A + V + +E + G + K DVS E
Sbjct: 34 TGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGE-AFAVKADVSQESE 92
Query: 69 VLRVADKVRKEVGEVTILVNNAGI 92
V + V + G + +LVNNAGI
Sbjct: 93 VEALFAAVIERWGRLDVLVNNAGI 116
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 72.6 bits (179), Expect = 1e-16
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 8/127 (6%)
Query: 2 LTNNPFQLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKL 61
L + F +TGA +G+G + + Q T++ D+ E L +
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGA----AVRFRNA 60
Query: 62 DVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKP---DVIRKTFDVNVLAH 117
DV+N + ++E G V LVN AG K L P D +T VN++
Sbjct: 61 DVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120
Query: 118 FWVLAHF 124
F ++
Sbjct: 121 FNMIRLA 127
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 72.6 bits (179), Expect = 1e-16
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG +A+ F + E E L + + ++S+R+ +
Sbjct: 33 TGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDV----FVFSANLSDRKSI 88
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
++A+ +E+ + ILVNNAGI
Sbjct: 89 KQLAEVAEREMEGIDILVNNAGI 111
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 71.1 bits (175), Expect = 4e-16
Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 8/118 (6%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-------NETKQMLEEQGYKNIHTYKLD 62
TGA GIG +A + + + N + + G + + K D
Sbjct: 12 TGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGL-ALKCD 70
Query: 63 VSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ ++V G + ILVNNA + + + VN F
Sbjct: 71 IREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVC 128
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics; 2.50A
{Mycobacterium thermoresistibile}
Length = 285
Score = 71.2 bits (175), Expect = 5e-16
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 8/118 (6%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-------NETKQMLEEQGYKNIHTYKLD 62
+G GIG +AK+ + + + + +EE G + + D
Sbjct: 15 SGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQAL-PIVGD 73
Query: 63 VSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ + + V K ++ G + I VNNA + + E + V + V
Sbjct: 74 IRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAV 131
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 69.6 bits (171), Expect = 2e-15
Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 10/120 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG +G+G A++ V + V D+ G + L N DV++ ++V
Sbjct: 18 TGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN----NCVFAPADVTSEKDV 73
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPL---NEQKP---DVIRKTFDVNVLAHFWVLAH 123
+ + G V + VN AGI + + + ++ DVN++ F V+
Sbjct: 74 QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRL 133
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 69.1 bits (170), Expect = 2e-15
Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 12/115 (10%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGN-NETKQMLEEQGYKNIHTYKLDVSNREE 68
T A + G + Q T+VC D + E G ++
Sbjct: 7 THARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG--------TIALAEQK 58
Query: 69 VLRVADKVRKEVGEVTILVNNAGI---MPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
R+ D + + +V+N I M PL IR+ F+ + +
Sbjct: 59 PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILL 113
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 67.3 bits (165), Expect = 5e-15
Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 25/114 (21%)
Query: 9 LTGAGNGIGRELAKQFVQ-HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
L GA +G + ++ + +V G + +D++N +
Sbjct: 8 LIGASGTLGSAVKERLEKKAEVITA-------------------GRHS-GDVTVDITNID 47
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
+ ++ + +VG+V +V+ G PL E P+ T + ++
Sbjct: 48 SIKKMYE----QVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLV 97
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 67.9 bits (167), Expect = 5e-15
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA +GIG +A+ + ++ +E+ L++ +++N+EE
Sbjct: 20 TGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNY----TIEVCNLANKEEC 75
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
+ + + ILV NAGI
Sbjct: 76 ----SNLISKTSNLDILVCNAGI 94
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 67.2 bits (165), Expect = 1e-14
Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 11/111 (9%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TGA +G A + ++H +V + + + + L + G D S
Sbjct: 33 TGASQRVGLHCALRLLEHGHRVIISY-----RTEHASVTELRQAG---AVALYGDFSCET 84
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
++ D ++ + + +V+NA + ++ D + F V++LA +
Sbjct: 85 GIMAFIDLLKTQTSSLRAVVHNASEWLAETP-GEEADNFTRMFSVHMLAPY 134
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 67.4 bits (165), Expect = 1e-14
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 10 TGAGNGIGRELAKQFVQ-----HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVS 64
TG +GIG LA + KV D+ +G ++ T +LDV
Sbjct: 8 TGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR 67
Query: 65 NREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNV 114
+ + V ++V + G V +LV NAG+ PL D + DVNV
Sbjct: 68 DSKSVAAARERVTE--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNV 115
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 67.7 bits (166), Expect = 2e-14
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TGA GIG +A+ F + T+V D+D + K++ ++ G LDV+ + V
Sbjct: 219 TGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVGGT---ALTLDVTADDAV 274
Query: 70 LRVADKVRKEVGE-VTILVNNAGI 92
++ V + G V ILVNNAGI
Sbjct: 275 DKITAHVTEHHGGKVDILVNNAGI 298
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus
anthracis str}
Length = 255
Score = 66.4 bits (163), Expect = 2e-14
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 10 TGAGNGIGRELAKQFVQHKVT-LVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
TGA GIGR +AK+ + + ++ ET ++ G + ++ +
Sbjct: 13 TGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIGANLESLHG 71
Query: 69 VLRVADKVRKEVGEVT------ILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
V + + E+ T IL+NNAGI P + E + VN A F+++
Sbjct: 72 VEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFII 130
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 66.5 bits (163), Expect = 2e-14
Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 11/120 (9%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDID-EKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
+G G+G ++ + +V D+ EKG K + +E G +V++ +
Sbjct: 36 SGGAGGLGEATVRRLHADGLGVVIADLAAEKG----KALADELG-NRAEFVSTNVTSEDS 90
Query: 69 VLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKP----DVIRKTFDVNVLAHFWVLAH 123
VL + + +V + G + + + KT D+ + + V
Sbjct: 91 VLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARL 150
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus}
SCOP: c.2.1.2
Length = 242
Score = 65.7 bits (161), Expect = 3e-14
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 18/118 (15%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG +G+GR A +V D+ +G +++ + DV+ E+V
Sbjct: 8 TGGASGLGRAAALALKARGYRVVVLDLRREG-------------EDLIYVEGDVTREEDV 54
Query: 70 LRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKP---DVIRKTFDVNVLAHFWVLAH 123
R + +E + +V+ AG+ + K L ++ P + R+ +VN+L F VL
Sbjct: 55 RRAVARA-QEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 65.7 bits (161), Expect = 3e-14
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 12/126 (9%)
Query: 2 LTNNPFQLTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKL 61
+ + +TG +G+G K+ + +V DI + ++ + G
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG------EDVVADLG-DRARFAAA 59
Query: 62 DVSNREEVLRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKP---DVIRKTFDVNVLAH 117
DV++ V D +G + I+VN AG + L+ RK D+N++
Sbjct: 60 DVTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118
Query: 118 FWVLAH 123
F VL
Sbjct: 119 FNVLRL 124
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 64.4 bits (158), Expect = 8e-14
Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 10/111 (9%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIGR +A+ V + + + E Q L D+ +++
Sbjct: 8 TGGSRGIGRAIAEALVARGYRVAIASRNPE---EAAQSLGAVPLP------TDLE-KDDP 57
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ + + +G + +LV+ A + KP E + R+ +++ F +
Sbjct: 58 KGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLL 108
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain
dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 64.3 bits (157), Expect = 1e-13
Identities = 23/116 (19%), Positives = 36/116 (31%), Gaps = 26/116 (22%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
+G GIG K +V DI + D+S E
Sbjct: 7 SGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGR 48
Query: 70 LR-VADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHF 124
+ +AD + K + LV AG+ P + V+ VN ++ F
Sbjct: 49 KQAIADVLAKCSKGMDGLVLCAGLGP-------QTKVLGNVVSVNYFGATELMDAF 97
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 63.3 bits (155), Expect = 3e-13
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 12/83 (14%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG +A++ + + ++DV++ + V
Sbjct: 21 TGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTDSDAV 68
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
R V + G V +LV+NAG+
Sbjct: 69 DRAFTAVEEHQGPVEVLVSNAGL 91
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 63.4 bits (155), Expect = 3e-13
Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 18/128 (14%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TG IG +A + Q +V +V + E L + K D+S
Sbjct: 17 TGGARRIGHSIAVRLHQQGFRV-VVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSS 75
Query: 68 EVL----RVADKVRKEVGEVTILVNNAGIMPCKPL-----------NEQKPDVIRKTFDV 112
+L + D + G +LVNNA PL + + + F
Sbjct: 76 SLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGS 135
Query: 113 NVLAHFWV 120
N +A ++
Sbjct: 136 NAVAPLFL 143
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 63.0 bits (154), Expect = 5e-13
Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 17/125 (13%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TGA IGR +A + Q +V ++ + + L ++ + D++N
Sbjct: 29 TGAAKRIGRAIAVKLHQTGYRV-VIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSN 87
Query: 68 ----EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIR----------KTFDVN 113
+ + + G +LVNNA PL + + + N
Sbjct: 88 VLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTN 147
Query: 114 VLAHF 118
+A F
Sbjct: 148 AIAPF 152
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas;
oxidoreductase; 1.99A {Streptomyces coelicolor}
Length = 253
Score = 62.6 bits (153), Expect = 5e-13
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 12/83 (14%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG GIG +A+ F + + + K D+++ E+V
Sbjct: 27 TGGNRGIGLAIARAFADAGDKVAI--------TYRS----GEPPEGFLAVKCDITDTEQV 74
Query: 70 LRVADKVRKEVGEVTILVNNAGI 92
+ ++ + G V +L+ NAG+
Sbjct: 75 EQAYKEIEETHGPVEVLIANAGV 97
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 62.0 bits (151), Expect = 7e-13
Identities = 8/112 (7%), Positives = 27/112 (24%), Gaps = 10/112 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
G +G + F + D+ E +++ + + +
Sbjct: 13 YGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD---------SFTEQADQ 63
Query: 70 LRVADKVRKEVGEVTILVNNAG-IMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ +V ++ AG ++ + ++
Sbjct: 64 VTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 61.2 bits (149), Expect = 2e-12
Identities = 10/115 (8%), Positives = 35/115 (30%), Gaps = 10/115 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
G +G + + F ++ T++ D+ ++ +++ + + +E+
Sbjct: 9 YGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGN---------KNWTEQEQS 59
Query: 70 LRVADKVRKEVGEVTILVNNAGI-MPCKPLNEQKPDVIRKTFDVNVLAHFWVLAH 123
+ + +V + AG ++ +V +
Sbjct: 60 ILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 114
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative, joint
CE structural genomics; HET: NAD; 2.50A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 249
Score = 61.0 bits (149), Expect = 2e-12
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 16/110 (14%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
A GIGR +A Q + +++L+ G++ + D+
Sbjct: 25 LAASRGIGRAVADVLSQEGAEVT-------ICARNEELLKRSGHRYV---VCDLRK---- 70
Query: 70 LRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
D + ++V EV ILV NAG +E + ++ D L
Sbjct: 71 --DLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIK 118
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 59.6 bits (145), Expect = 9e-12
Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
TGA +G+G A++ + V + D KG + M + + +LD+ +
Sbjct: 22 TGANSGLGAVTARELARRGATVIMAVRDT-RKGEAAARTMAGQ-----VEVRELDLQDLS 75
Query: 68 EVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
V R AD V +L+NNAGIM P D N L HF
Sbjct: 76 SVRRFADGVSG----ADVLINNAGIMAV-PYALTV-DGFESQIGTNHLGHF 120
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 57.4 bits (139), Expect = 6e-11
Identities = 25/142 (17%), Positives = 38/142 (26%), Gaps = 34/142 (23%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN-- 65
TGA +GR +A+ V + + N L + + T + D+SN
Sbjct: 15 TGAAKRLGRSIAEGLHAEGYAV-CLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 73
Query: 66 ---------------REEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPD------ 104
+ G +LVNNA PL D
Sbjct: 74 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 133
Query: 105 --------VIRKTFDVNVLAHF 118
F N +A +
Sbjct: 134 GDREAMETATADLFGSNAIAPY 155
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin salvage,
drug resistance; HET: NAP FE1; 2.61A {Leishmania major}
SCOP: c.2.1.2
Length = 328
Score = 57.1 bits (138), Expect = 8e-11
Identities = 25/142 (17%), Positives = 38/142 (26%), Gaps = 34/142 (23%)
Query: 10 TGAGNGIGRELAKQFVQH--KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN-- 65
TGA +GR +A+ V + + N L + + T + D+SN
Sbjct: 52 TGAAKRLGRSIAEGLHAEGYAV-CLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 110
Query: 66 ---------------REEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPD------ 104
+ G +LVNNA PL D
Sbjct: 111 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCV 170
Query: 105 --------VIRKTFDVNVLAHF 118
F N +A +
Sbjct: 171 GDREAMETATADLFGSNAIAPY 192
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 53.9 bits (130), Expect = 8e-10
Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 11/126 (8%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI----------DEKGNNETKQMLEEQGYKNIHTY 59
TGAG GIGR A F +V DI + G + +
Sbjct: 33 TGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADG 92
Query: 60 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
+V++ ++ + + G + +LVNNAGI+ + + + V++ HF
Sbjct: 93 S-NVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFA 151
Query: 120 VLAHFW 125
+ H
Sbjct: 152 TMRHAA 157
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 52.7 bits (127), Expect = 3e-09
Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 13/125 (10%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI---------DEKGNNETKQMLEEQGYKNIHTYK 60
TGAG G+GR A F + +V D+ ++ + + +G K +
Sbjct: 15 TGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV---- 70
Query: 61 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
+ + E ++ G + ++VNNAGI+ + + + V++ F V
Sbjct: 71 ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQV 130
Query: 121 LAHFW 125
W
Sbjct: 131 TRAAW 135
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 51.2 bits (123), Expect = 9e-09
Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI---------DEKGNNETKQMLEEQGYKNIHTYK 60
TGAG G+G+ + +F + +V D+ + K + + + G +
Sbjct: 14 TGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---- 69
Query: 61 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
D +N + ++ + K G V +++NNAGI+ + + + DV++ F V
Sbjct: 70 ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAV 129
Query: 121 LAHFW 125
W
Sbjct: 130 TKAAW 134
Score = 50.1 bits (120), Expect = 2e-08
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 9 LTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
+TGAG G+G+E AK F ++ +V D +T ++ G + DV+ ++
Sbjct: 327 ITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQH-DVA--KD 381
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVLAHFW 125
+ V + G + ILVNNAGI+ + + V+++ F + W
Sbjct: 382 SEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAW 438
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 50.2 bits (120), Expect = 2e-08
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDI---------DEKGNNETKQMLEEQGYKNIHTYK 60
TGAG G+GRE A F + +V D+ ++ + + + G + + Y
Sbjct: 25 TGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYN 84
Query: 61 LDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWV 120
V + +V+ A K G V ILVNNAGI+ + L + DV++ F
Sbjct: 85 -SVIDGAKVIETA---IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKC 140
Query: 121 LAHFW 125
+
Sbjct: 141 TQAAF 145
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 49.5 bits (119), Expect = 2e-08
Identities = 17/121 (14%), Positives = 30/121 (24%), Gaps = 11/121 (9%)
Query: 10 TGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEV 69
TG+ +GIG L + + T++ D + + + V
Sbjct: 7 TGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRE----TAVAAVLDRCGGV 62
Query: 70 LRVA-----DKVRKEVGEVTILVNNAGIMPCK--PLNEQKPDVIRKTFDVNVLAHFWVLA 122
L V + + VN G+ V +A A
Sbjct: 63 LDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGA 122
Query: 123 H 123
Sbjct: 123 A 123
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 40.6 bits (95), Expect = 3e-05
Identities = 9/112 (8%), Positives = 22/112 (19%), Gaps = 11/112 (9%)
Query: 9 LTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
+ +G A +V + ++ ++ + ++
Sbjct: 124 VLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDAS 181
Query: 69 VLRVADKVRKEVGEVTILVNN--AGIMPCKPLNEQKPDVIRKTFDVNVLAHF 118
V + G+ Q I D N
Sbjct: 182 RAEA-------VKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.0 bits (85), Expect = 9e-04
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 37/121 (30%)
Query: 3 TNNPFQLTGAGNGI-GRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKL 61
NNP LT G G+ + + + ++ G +T+++ +E N H+
Sbjct: 1666 INNPVNLTIHFGGEKGKRIRENYSAM-----IFETIVDGKLKTEKIFKE---INEHSTSY 1717
Query: 62 DVSNREEVLR-------------VA--DKVRKE-------------VGEVTILVNNAGIM 93
+ + +L A + ++ + +GE L + A +M
Sbjct: 1718 TFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVM 1777
Query: 94 P 94
Sbjct: 1778 S 1778
Score = 29.2 bits (65), Expect = 0.37
Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 19/61 (31%)
Query: 65 NREEVLRVADKVRKEVGE-VTILVN-N--------AG--------IMPCKPLNEQKPDVI 106
++E + V ++V K G V I VN N AG + QK D+I
Sbjct: 1822 SQEALQYVVERVGKRTGWLVEI-VNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDII 1880
Query: 107 R 107
Sbjct: 1881 E 1881
Score = 25.4 bits (55), Expect = 7.4
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 25/76 (32%)
Query: 19 ELAKQFVQHKVTLVCWDIDEKG---------NNETKQ---------------MLEEQGYK 54
+A F Q + V + ++ N E +Q +L +
Sbjct: 1816 RVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQ 1875
Query: 55 NIHTYKLDVS-NREEV 69
I +L S + EEV
Sbjct: 1876 KIDIIELQKSLSLEEV 1891
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics,
PSI-2, protein structure initiative, MI center for
structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A
{Vibrio fischeri} PDB: 3pvz_A*
Length = 399
Score = 34.7 bits (80), Expect = 0.004
Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Query: 10 TGAGNGIGRELAKQFVQHKV-TLVCWDIDEKGNNETKQMLEE---QGYKNIHTYKLDVSN 65
G IG+ + K+ + L DI E E + + + T+ LD+ +
Sbjct: 41 LGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGS 100
Query: 66 REEVLRVADKVRKEV 80
E + + +
Sbjct: 101 IEYDAFIKADGQYDY 115
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 34.5 bits (79), Expect = 0.006
Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 7/117 (5%)
Query: 9 LTGAGNGIGRELAKQFVQHKVT-LVCW---DIDEKGNNETKQMLEEQGYKNIHTYKLDVS 64
+TG G G +LA+ LV I + QG + + + S
Sbjct: 1889 ITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQ-VLVSTSNAS 1947
Query: 65 NREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
+ + + + + G V + N A ++ L Q P+ + L
Sbjct: 1948 SLDGARSLITEATQL-GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSG-TANL 2002
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate
pathway, dehydrogenase, oxidoreductase; 2.00A
{Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A*
1e5q_A
Length = 450
Score = 34.1 bits (77), Expect = 0.007
Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 17/106 (16%)
Query: 11 GAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEVL 70
G+G + R + + + + G ++ LDV++
Sbjct: 10 GSG-FVTRPTLDVLTDSGIKVTVACRTLESAKKLS-----AGVQHSTPISLDVNDDAA-- 61
Query: 71 RVADKVRKEVGEVTILVN----NAGIMPCKPLNEQKPDVIRKTFDV 112
+ EV + ++++ K QK V+ ++
Sbjct: 62 -----LDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVS 102
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion,
hydrolase; HET: NAD; 2.3A {Flavobacterium
meningosepticum} PDB: 2ixb_A*
Length = 444
Score = 33.5 bits (76), Expect = 0.012
Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 10/78 (12%)
Query: 11 GAGNGIGRELAKQFVQHK---VTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
G G+ + + + D D +++L++ G K + + +
Sbjct: 27 AVG-LRGQTHVENMARRDDVEIVAFA-DPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYK 84
Query: 68 EVLRVADKVRKEVGEVTI 85
+L+ K + V +
Sbjct: 85 NMLK-----DKNIDAVFV 97
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural
genomics, pyrococcus PSI-2, protein structure
initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm
3638}
Length = 373
Score = 32.7 bits (74), Expect = 0.023
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 11 GAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNR--EE 68
G + L + ++ ++ DIDE+ ++ E GY++I + D+ +
Sbjct: 180 GDDDLTSIALMLSGLPKRIAVL--DIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDY 237
Query: 69 VLRVADKV 76
L D
Sbjct: 238 ALHKFDTF 245
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH,
oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora
spinosa}
Length = 795
Score = 32.8 bits (75), Expect = 0.023
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 9 LTGAGNGIGRELAKQFVQHK----VTLVCWD-IDEKGNNETKQMLEEQGYKNIHTYKLDV 63
+TG +G E+A+ V + + LV G E L G + DV
Sbjct: 535 VTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG-AEVSLQACDV 593
Query: 64 SNREEVLRVADKVRKE 79
++RE + +V + E
Sbjct: 594 ADRETLAKVLASIPDE 609
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site,
lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Length = 445
Score = 31.2 bits (71), Expect = 0.074
Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Query: 43 ETKQMLEEQGYKNIHTYKLDV---SNREEVLRVADKVRKEVGEVTILV 87
+ ++M++E G+ I KL + EE+ V +R + + +
Sbjct: 200 QARRMIDEYGFSAI---KLKGGVFAPEEEMAAVE-ALRAAFPDHPLRL 243
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small
metabolism, PSI-II, NYSGXRC, structural genomics, PR
structure initiative; 1.95A {Sinorhizobium meliloti}
Length = 384
Score = 30.7 bits (70), Expect = 0.096
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 46 QMLEEQGYKNIHTYKLDV--SNREEVLRVADKVRKEVGEVTILV 87
+ QG + L V + ++ A VR E+G+ + +
Sbjct: 156 AVGHAQGERVF---YLKVGRGEKLDLEITA-AVRGEIGDARLRL 195
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative;
1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Length = 398
Score = 30.7 bits (70), Expect = 0.10
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 34 WDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN--REEVLRVADKVRKEVGEVTILV 87
D+ + +++EE G+ + KL + +V + VR+ + V + V
Sbjct: 166 ADLPKAMAEHAVRVVEEGGFDAV---KLKGTTDCAGDVAILR-AVREALPGVNLRV 217
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase,
magnesium binding, enzyme function initiative, enolase,
isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A
4dhg_A
Length = 441
Score = 30.5 bits (69), Expect = 0.15
Identities = 7/48 (14%), Positives = 20/48 (41%), Gaps = 7/48 (14%)
Query: 43 ETKQMLEEQGYKNIHTYKLDVSN---REEVLRVADKVRKEVGEVTILV 87
+ + ++ E G+++I KL +E + +R + + +
Sbjct: 195 QARLLIGEYGFRSI---KLKGGVFPPEQEAEAIQ-ALRDAFPGLPLRL 238
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint
center for structural genomics, JCSG, protein structu
initiative; HET: NAI UNL; 2.05A {Clostridium
acetobutylicum} SCOP: c.2.1.2
Length = 292
Score = 30.2 bits (69), Expect = 0.15
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 24/70 (34%)
Query: 9 LTGAGNG-IGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
+TGA NG +GRE+ KQ V ++ D+ + LD++N
Sbjct: 17 ITGA-NGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVL 53
Query: 68 EVLRVADKVR 77
V + ++ +
Sbjct: 54 AVNKFFNEKK 63
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics,
infectious diseases, bacillus anthracis STR. AMES,
rhamnose biosynthetic pathway; HET: NAP; 2.65A
{Bacillus anthracis}
Length = 287
Score = 30.2 bits (69), Expect = 0.16
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 24/70 (34%)
Query: 9 LTGAGNG-IGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
+TGA NG +G++L ++ + + +D LD++N
Sbjct: 10 ITGA-NGQLGKQLQEELNPEEYDIYPFDKKL----------------------LDITNIS 46
Query: 68 EVLRVADKVR 77
+V +V ++R
Sbjct: 47 QVQQVVQEIR 56
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A
{Gibberella zeae}
Length = 445
Score = 30.1 bits (68), Expect = 0.18
Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Query: 43 ETKQMLEEQGYKNIHTYKLDV---SNREEVLRVADKVRKEVGEVTILV 87
+ K++++E G+K I KL +EV + + K V + +
Sbjct: 198 QAKKIIDEYGFKAI---KLKGGVFPPADEVAAIK-ALHKAFPGVPLRL 241
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium
tumefa structural genomics, PSI-2, protein structure
initiative; 1.85A {Agrobacterium tumefaciens}
Length = 342
Score = 29.3 bits (66), Expect = 0.29
Identities = 19/122 (15%), Positives = 41/122 (33%), Gaps = 31/122 (25%)
Query: 10 TGAGNG-IGRELAKQFVQ---------HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTY 59
G G +GR+L ++ V+ K TL+ D+ + +
Sbjct: 20 IG-AAGMVGRKLTQRLVKDGSLGGKPVEKFTLI--DVFQPEA-------PAGFSGAVDAR 69
Query: 60 KLDVSNREEVLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFW 119
D+S E ++ + ++ + A I+ E D K + +N+ +
Sbjct: 70 AADLSAPGEAEKLVE------ARPDVIFHLAAIV--SGEAELDFD---KGYRINLDGTRY 118
Query: 120 VL 121
+
Sbjct: 119 LF 120
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid
synthesis, rossmann-like fold, enoyl-ACP reductas
binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB:
3oif_A* 2qio_A* 3oje_A 3ojf_A*
Length = 266
Score = 29.1 bits (66), Expect = 0.33
Identities = 6/43 (13%), Positives = 17/43 (39%)
Query: 45 KQMLEEQGYKNIHTYKLDVSNREEVLRVADKVRKEVGEVTILV 87
++ + DV+N E+ ++++VG + +
Sbjct: 50 HELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVGVIHGIA 92
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid
dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter
salexigens}
Length = 267
Score = 29.2 bits (66), Expect = 0.33
Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 10/68 (14%)
Query: 9 LTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
+TGA G+G + + DI + G E + D+++ +
Sbjct: 7 VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE----------AHEEIVACDLADAQA 56
Query: 69 VLRVADKV 76
V +
Sbjct: 57 VHDLVKDC 64
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.4 bits (65), Expect = 0.38
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 10/36 (27%)
Query: 98 LNEQKPDVIRKTF--------DVNVLAHFWVLAHFW 125
LN +P RK F ++ +L+ W
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTI--LLSLIW 396
Score = 27.1 bits (59), Expect = 2.0
Identities = 21/131 (16%), Positives = 39/131 (29%), Gaps = 36/131 (27%)
Query: 28 KVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN-REEVLRVADKVRKEVGEVTIL 86
+ W + K ++ +EE N YK +S + E + + R + + L
Sbjct: 63 GTLRLFWTLLSKQEEMVQKFVEEVLRIN---YKFLMSPIKTEQRQPSMMTRMYIEQRDRL 119
Query: 87 VNNAGIMPCKPLN---EQKPDVIRKTF-----DVNVLAH----F--WVLAH--------- 123
N+ + N Q +R+ NVL +A
Sbjct: 120 YNDNQVFA--KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQ 177
Query: 124 -------FWVS 127
FW++
Sbjct: 178 CKMDFKIFWLN 188
>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH];
oxidoreductase, short-chain dehydrogenase/reductase
superfam fatty acid biosynthesis; HET: NAP E9P GLU;
1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A*
4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A*
Length = 282
Score = 28.8 bits (65), Expect = 0.48
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 38 EKGNNETKQMLEEQGYKNIHTYKLDVSNREEVLRVADKVRKEVGEVTILV 87
E+ E +++LE+ H Y++DV + EEV+ +++ K+VG + +
Sbjct: 68 ERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVY 117
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding,
oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB:
3rfv_A* 3rfx_A*
Length = 267
Score = 28.5 bits (64), Expect = 0.59
Identities = 19/113 (16%), Positives = 38/113 (33%), Gaps = 25/113 (22%)
Query: 9 LTGAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
+TGA +GR + ++ L D+ L+ G N + D+++
Sbjct: 8 VTGAAGQLGRVMRERLAPMAEILRLADLSP---------LDPAG-PNEECVQCDLADANA 57
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMPCKPLNEQKPDVIRKTFDVNVLAHFWVL 121
V + V +V+ GI KP + N++ + +
Sbjct: 58 VNAM-------VAGCDGIVHLGGISVEKP--------FEQILQGNIIGLYNLY 95
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase
superfamily fold, D-glucarate dehydratase, D-glucara
isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes}
PDB: 3n6j_A 3n6h_A*
Length = 455
Score = 28.2 bits (63), Expect = 0.73
Identities = 6/45 (13%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 43 ETKQMLEEQGYKNIHTYKLDVSNREEVLRVADKVRKEVGEVTILV 87
+ G+K+ K V + + +++K + I +
Sbjct: 192 LAAASKDRYGFKDFKL-KGGVFEGSKEIDTVIELKKHFPDARITL 235
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann,
PSI, M structural genomics; 1.70A {Archaeoglobus
fulgidus}
Length = 141
Score = 27.6 bits (62), Expect = 0.84
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 11 GAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEVL 70
G+ G L ++ ++ D + E ++LE++G+ D ++ E
Sbjct: 13 GSEA-AGVGLVRELTAAGKKVLAVDKSK----EKIELLEDEGF---DAVIADPTD-ESFY 63
Query: 71 RVAD 74
R D
Sbjct: 64 RSLD 67
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase;
2.25A {Homo sapiens} PDB: 2ydx_A
Length = 315
Score = 27.6 bits (62), Expect = 1.1
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 17/73 (23%)
Query: 9 LTGAGNG-IGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNRE 67
+TGA G +GR + K+F Q+ V ++++ +
Sbjct: 7 VTGA-TGLLGRAVHKEFQQNNWHAVGCGFRRARPKFE---------------QVNLLDSN 50
Query: 68 EVLRVADKVRKEV 80
V + + V
Sbjct: 51 AVHHIIHDFQPHV 63
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural
genomics, SGC, structural genomics consortium; HET: SAH;
1.75A {Homo sapiens} SCOP: c.66.1.42
Length = 241
Score = 27.7 bits (61), Expect = 1.2
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 11 GAGNG-IGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN 65
GAG G I + L + V +V DI E + K L E+G + + + + +
Sbjct: 87 GAGIGRITKRLLLPLFRE-VDMV--DITEDFLVQAKTYLGEEGKRVRNYFCCGLQD 139
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH
BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella
tularensis subsp} PDB: 2jjy_A*
Length = 280
Score = 27.2 bits (61), Expect = 1.4
Identities = 5/30 (16%), Positives = 13/30 (43%)
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILV 87
DV + +E+ + ++ K + +V
Sbjct: 79 VLPCDVISDQEIKDLFVELGKVWDGLDAIV 108
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein
structure initiative, PS nysgrc; 1.85A {Chromohalobacter
salexigens} PDB: 3nfu_A
Length = 450
Score = 27.5 bits (61), Expect = 1.4
Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 42 NETKQMLEEQGYKNIHTYKLDVSNREEVLRVADKVRKEVGEVTILV 87
N + + G+K+ K V EE + + E + +
Sbjct: 188 NLARAAYDRYGFKDFKL-KGGVLRGEEEADCIRALHEAFPEARLAL 232
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural
genomics, lyase; 1.70A {Actinobacillus succinogenes}
PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A*
1jct_A* 3pwg_A* 1bqg_A
Length = 464
Score = 27.5 bits (61), Expect = 1.4
Identities = 7/45 (15%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Query: 43 ETKQMLEEQGYKNIHTYKLDVSNREEVLRVADKVRKEVGEVTILV 87
+ E+ G+ + K V + E + K + I +
Sbjct: 209 LAEAAYEKYGFNDF-KLKGGVLDGFEEAEAVTALAKRFPDARITL 252
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION
transporter, symporter, transport protein; HET: NAI;
2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A*
2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Length = 144
Score = 26.9 bits (60), Expect = 1.6
Identities = 11/64 (17%), Positives = 19/64 (29%), Gaps = 9/64 (14%)
Query: 11 GAGNGIGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREEVL 70
G G G + K+ + ++ DI+E E H + + E L
Sbjct: 13 GLGR-FGGSIVKELHRMGHEVLAVDINE----EKVNAYASYAT---HAVIANATE-ENEL 63
Query: 71 RVAD 74
Sbjct: 64 LSLG 67
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty
acid biosynthesis, oxidation reduction; 1.50A {Thermus
thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Length = 261
Score = 26.8 bits (60), Expect = 2.0
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILV 87
++ DV+ EE+ + V++ G + LV
Sbjct: 62 LFRADVTQDEELDALFAGVKEAFGGLDYLV 91
>1im4_A DBH; DNA polymerase PALM, thumb, fingers, helix-hairpin-helix,
fidelity, processivity, transferase; 2.30A {Sulfolobus
solfataricus} SCOP: e.8.1.7
Length = 221
Score = 26.7 bits (60), Expect = 2.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 13/61 (21%)
Query: 61 LDVSNREEVL-----RVADKVRKEVGEVTILVNNAGIMPCKPL-----NEQKPD---VIR 107
LDV+N+ E +A K+++E+ E + G+ P K L ++ KP+ VIR
Sbjct: 114 LDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSKPNGLGVIR 173
Query: 108 K 108
Sbjct: 174 P 174
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial
target, type II fatty acid biosynthesis,
enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A
{Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Length = 275
Score = 26.8 bits (60), Expect = 2.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILV 87
Y+LDVS E + + V+K++G + +V
Sbjct: 60 VYELDVSKEEHFKSLYNSVKKDLGSLDFIV 89
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid,
oxidoreductase, structural genomics; 1.90A
{Burkholderia pseudomallei 1710B}
Length = 271
Score = 26.8 bits (60), Expect = 2.3
Identities = 4/30 (13%), Positives = 13/30 (43%)
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILV 87
+ DV++ ++ + ++ + LV
Sbjct: 68 VFPCDVADDAQIDALFASLKTHWDSLDGLV 97
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent
enoyl-ACP reductase, FABI, aquifex A VF5, structural
genomics, PSI; 2.00A {Aquifex aeolicus}
Length = 285
Score = 26.8 bits (60), Expect = 2.3
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILV 87
K DVS E++ + + + G + I+V
Sbjct: 75 VVKCDVSLDEDIKNLKKFLEENWGSLDIIV 104
>1wju_A NEDD8 ultimate buster-1; ubiquitin-like domain, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, protein binding; NMR {Homo sapiens}
SCOP: d.15.1.1
Length = 100
Score = 25.8 bits (56), Expect = 2.4
Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 11/75 (14%)
Query: 39 KGNNETKQ--------MLEEQGYKNIHTY---KLDVSNREEVLRVADKVRKEVGEVTILV 87
+ + L + K+ +L ++ RE ++A+ + + I++
Sbjct: 5 SSGDNYRTTGIATIEVFLPPRLKKDRKNLLETRLHITGRELRSKIAETFGLQENYIKIVI 64
Query: 88 NNAGIMPCKPLNEQK 102
N + K L EQ
Sbjct: 65 NKKQLQLGKTLEEQG 79
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance,
transferase; HET: SAH; 1.48A {Escherichia coli} PDB:
2xva_A* 4dq0_A* 2i6g_A*
Length = 199
Score = 26.3 bits (58), Expect = 2.7
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 11 GAGNG-IGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN 65
G GNG LA + V WD + +++ + N+HT +D++N
Sbjct: 40 GCGNGRNSLYLAAN--GYDVD--AWDKNAMSIANVERIKSIENLDNLHTRVVDLNN 91
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase,
oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia
coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A*
1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A*
1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Length = 265
Score = 26.4 bits (59), Expect = 2.8
Identities = 4/30 (13%), Positives = 11/30 (36%)
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILV 87
+ DV+ + + ++ K + V
Sbjct: 63 VLQCDVAEDASIDTMFAELGKVWPKFDGFV 92
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid,
structural genomics, seattle structural genomics center
for infectious disease; 2.35A {Brucella melitensis} PDB:
4eit_A*
Length = 293
Score = 26.4 bits (59), Expect = 2.9
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILV 87
DV++ + V + + K+ G++ LV
Sbjct: 85 AGHCDVADAASIDAVFETLEKKWGKLDFLV 114
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI,
UW, decode, eonyl-(acyl-carrier-PR reductase, NAD,
oxidoreductase; HET: NAD; 1.80A {Anaplasma
phagocytophilum} PDB: 3k2e_A*
Length = 296
Score = 26.5 bits (59), Expect = 2.9
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 58 TYKLDVSNREEVLRVADKVRKEVGEVTILV 87
T DVS+ E V + + +E G + +V
Sbjct: 84 TVPCDVSDAESVDNMFKVLAEEWGSLDFVV 113
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer
9468A, muconate lactonizing enzyme, PSI-2, protein
structure initiative; 1.70A {Ruegeria pomeroyi} PDB:
3i6t_A
Length = 385
Score = 26.5 bits (59), Expect = 3.1
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 13/57 (22%)
Query: 40 GNNETKQMLEE------QGYKNIHTYKLDVSNR---EEVLRVADKVRKEVGEVTILV 87
N + + G I KL R +++R+ + ++ E + V
Sbjct: 145 ANPDFDADIALMERLRADGVGLI---KLKTGFRDHAFDIMRLE-LIARDFPEFRVRV 197
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel,
unusual catalysis, disease mutati glycosyltransferase,
lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo
sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A*
3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A*
3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A*
3l0n_A* ...
Length = 260
Score = 26.1 bits (57), Expect = 3.3
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 61 LDVSNREEVLRVADKVRKEVGEVTI 85
DVS E+L++AD + + +
Sbjct: 38 ADVSLARELLQLADALGPSICMLKT 62
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain,
orotidine 5'-monophosphate decarboxylase, human,
5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens}
PDB: 3bvj_A* 3mw7_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Length = 312
Score = 26.1 bits (57), Expect = 3.5
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 61 LDVSNREEVLRVADKVRKEVGEVTI 85
DVS E+L++AD + + +
Sbjct: 90 ADVSLARELLQLADALGPSICMLKT 114
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 25.9 bits (56), Expect = 4.0
Identities = 7/52 (13%), Positives = 14/52 (26%), Gaps = 17/52 (32%)
Query: 34 W------DIDEKGNNETKQM--LEEQGYKNIHTY---------KLDVSNREE 68
W + E E+ K++ + K ++NR
Sbjct: 90 WREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIA 141
>3cjh_B Mitochondrial import inner membrane translocase S TIM8; cyclic
heterohexamer, chaperone, M binding, mitochondrion,
protein transport; 2.60A {Saccharomyces cerevisiae}
Length = 64
Score = 24.4 bits (53), Expect = 5.1
Identities = 8/23 (34%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Query: 16 IGRELAKQFVQ---HKVTLVCWD 35
+ E +KQ VQ H+ T +C+
Sbjct: 1 LEGENSKQKVQMSIHQFTNICFK 23
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus
thermophilus} PDB: 2yz5_A 2z4g_A
Length = 267
Score = 25.4 bits (56), Expect = 5.9
Identities = 5/34 (14%), Positives = 13/34 (38%), Gaps = 5/34 (14%)
Query: 27 HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYK 60
H+ V + E + +L G++ + +
Sbjct: 226 HRPEEVGFAFPE-----VQALLAGLGFREAYYFV 254
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate
decarboxylase, K93R mutant, lyase, phosphoprotein;
1.60A {Saccharomyces cerevisiae} PDB: 3gdl_A* 3gdk_A*
3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Length = 267
Score = 25.4 bits (55), Expect = 6.3
Identities = 5/25 (20%), Positives = 13/25 (52%)
Query: 61 LDVSNREEVLRVADKVRKEVGEVTI 85
LDV +E+L + + + ++ +
Sbjct: 36 LDVRTTKELLELVEALGPKICLLKT 60
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase,
oxidoreductase, SDR, cardenolides, cardiac glycosides;
HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Length = 364
Score = 25.5 bits (55), Expect = 6.6
Identities = 12/86 (13%), Positives = 23/86 (26%), Gaps = 9/86 (10%)
Query: 10 TGAGNG-IGRELAKQFVQHKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSNREE 68
G G IG LA+ W + E+ + D+S+ ++
Sbjct: 7 VGV-TGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQ---CDISDPDD 62
Query: 69 VLRVADKVRKEVGEVTILVNNAGIMP 94
+ +VT +
Sbjct: 63 SQAKLSPLT----DVTHVFYVTWANR 84
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis,
hydrolyase/translation complex; HET: ADP; 1.90A
{Pyrococcus furiosus}
Length = 538
Score = 24.9 bits (55), Expect = 8.9
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 61 LDVSNREEVLRVADKVRKEVGEVTILV 87
LDV R V R + ++ T LV
Sbjct: 432 LDVEQRLAVSRAIRHLMEKNE-KTALV 457
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG,
veillo parvula; HET: MLZ; 1.25A {Veillonella parvula
dsm 2008} PDB: 3r14_A*
Length = 221
Score = 25.0 bits (54), Expect = 9.7
Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 12/74 (16%)
Query: 9 LTGAGNGIGRELAKQFVQ---HKVTLVCWDIDEKGNNETKQMLEEQGYKNIHTYKLDVSN 65
+ GA I + L + +TL +T+ E ++ + + N
Sbjct: 10 ILGAAGQIAQXLTATLLTYTDMHITLYG------RQLKTRIPPEIIDHERVTVIEGSFQN 63
Query: 66 REEVLRV---ADKV 76
+ + A+ V
Sbjct: 64 PGXLEQAVTNAEVV 77
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.135 0.408
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,986,929
Number of extensions: 109311
Number of successful extensions: 815
Number of sequences better than 10.0: 1
Number of HSP's gapped: 603
Number of HSP's successfully gapped: 248
Length of query: 131
Length of database: 6,701,793
Length adjustment: 83
Effective length of query: 48
Effective length of database: 4,384,350
Effective search space: 210448800
Effective search space used: 210448800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.0 bits)