BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8447
(229 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 57 VTERYKGFSPFSFQG-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWV 115
+ E YKGF G L F+++ N F E +F FD DG I E++
Sbjct: 27 IQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFI 86
Query: 116 LGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR------NSLISHPQDEDPDE 169
+ LS RG E+ +K+ F +YDL+ +G+I++ EM ++++ +S++ P+DE E
Sbjct: 87 IALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPE 146
Query: 170 GVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCLPSDAAR 219
E R+MD ++DGK+S ++F + +P ++ QC PS A +
Sbjct: 147 ---KRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL-QCDPSSAGQ 192
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 12/160 (7%)
Query: 57 VTERYKGFSPFSFQG-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWV 115
V + YKGF G LD F+++ F +F FD DG I E++
Sbjct: 27 VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFI 86
Query: 116 LGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEM-------FQLLRNSLISHPQDEDPD 168
LS RGT +E +++ F +YDL+NDG+ITR EM +Q++ N+ + P++E+
Sbjct: 87 QALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNT-VELPEEENTP 145
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEA 208
E D + MD + DGK++ Q+FQ+ +P +++A
Sbjct: 146 EKRVDRI---FAMMDKNADGKLTLQEFQEGSKADPSIVQA 182
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 14 FRQEVETLCKIFKKLLNSSSNAGVPISTS----TPVVVQVSGL----PPSNVTER----- 60
F ++ C + K +L+S++ G S S + V Q GL + T++
Sbjct: 37 FTRQALMRCCLIKWILSSAAPQGSDSSDSELELSTVRHQPEGLDQLQAQTKFTKKELQSL 96
Query: 61 YKGFSPFSFQGL-DRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLS 119
Y+GF GL D F+ + F +F AFD +G IH +++V+GLS
Sbjct: 97 YRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLS 156
Query: 120 CFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP---DEGVRDLVE 176
LRGT E +K+ F +YD+N DG IT+EEM ++++ + P ++ + VE
Sbjct: 157 ILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVE 216
Query: 177 LALRKMDYDKDGKISFQDF 195
+KMD ++DG ++ +F
Sbjct: 217 RFFQKMDRNQDGVVTIDEF 235
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 4/142 (2%)
Query: 61 YKGFSPFSFQGL-DRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLS 119
Y+GF G+ + F+E+ F +F AFD +G + ++++ GLS
Sbjct: 70 YRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLS 129
Query: 120 CFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP---DEGVRDLVE 176
LRGT +E + + F +YD+N DG+IT+EEM +++ + P ++ R VE
Sbjct: 130 ILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVE 189
Query: 177 LALRKMDYDKDGKISFQDFQQS 198
+KMD +KDG ++ +F +S
Sbjct: 190 TFFQKMDKNKDGVVTIDEFIES 211
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 55 SNVTER-----YKGFSPFSFQGL-DRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGV 108
+N T+R Y+GF G+ + F+++ F +F AFD G
Sbjct: 13 TNFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 72
Query: 109 IHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN-----SLISHP- 162
+ +++V LS LRGT E +++TF +YD+N DG+I +EEM +++ ++P
Sbjct: 73 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 132
Query: 163 -QDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEA 208
+++ P R V++ +KMD +KDG ++ +F +S ++ ++ +
Sbjct: 133 LKEDTP----RQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRS 175
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 55 SNVTER-----YKGFSPFSFQGL-DRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGV 108
+N T+R Y+GF G+ + F+++ F +F AFD G
Sbjct: 46 TNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 105
Query: 109 IHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN-----SLISHP- 162
+ +++V LS LRGT E +++TF +YD+N DG+I +EEM +++ ++P
Sbjct: 106 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 165
Query: 163 -QDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEA 208
+++ P R V++ +KMD +KDG ++ +F +S ++ ++ +
Sbjct: 166 LKEDTP----RQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRS 208
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 11/144 (7%)
Query: 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIK 131
L R F ++ F + E +F FD+ +G IH +E++ LS RGT EE +
Sbjct: 43 LAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLS 102
Query: 132 FTFLIYDLNNDGFITREEMFQL------LRNSLISHPQDE-DPDEGVRDLVELALRKMDY 184
+ F +YDLN+DG+IT +EM + + S+++ +DE P+ V+ + +L MD
Sbjct: 103 WAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKL----MDK 158
Query: 185 DKDGKISFQDFQQSVTDEPLLLEA 208
++DG I+ +F++ +P ++ A
Sbjct: 159 NEDGYITLDEFREGSKVDPSIIGA 182
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 85/163 (52%), Gaps = 9/163 (5%)
Query: 55 SNVTER-----YKGFSPFSFQGL-DRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGV 108
+N T+R Y+GF G+ + F+++ F +F AFD G
Sbjct: 10 TNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 69
Query: 109 IHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR---NSLISHPQDE 165
+ +++V LS LRGT E +++TF +YD+N DG+I +EEM +++ + + ++
Sbjct: 70 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPV 129
Query: 166 DPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEA 208
++ R V++ +KMD +KDG ++ +F +S ++ ++ +
Sbjct: 130 LAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRS 172
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 17/167 (10%)
Query: 55 SNVTER-----YKGFSPFSFQGL-DRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGV 108
+N T+R Y+GF G+ + F+++ F +F AFD G
Sbjct: 10 TNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 69
Query: 109 IHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN-----SLISHP- 162
+ +++V LS LRGT E +++TF +YD+N DG+I +EEM +++ ++P
Sbjct: 70 VKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPV 129
Query: 163 -QDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEA 208
+++ P R V++ +KMD +KDG ++ +F +S ++ ++ +
Sbjct: 130 LKEDTP----RQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRS 172
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 12/171 (7%)
Query: 46 VVQVSGLPPSNVTERYKGFSPFSFQG-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRL 104
+V+ + + + YKGF G L++ F+++ F E +F FD
Sbjct: 16 LVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDAD 75
Query: 105 CDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL------LRNSL 158
+G I E++ LS RG + + + F +YDL+N+G I+ +EM ++ + S+
Sbjct: 76 KNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSM 135
Query: 159 ISHPQDED-PDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEA 208
+ P+DED P++ V + + MD +KDG+++ ++F + +P ++ A
Sbjct: 136 VKLPEDEDTPEKRVNKIFNM----MDKNKDGQLTLEEFCEGSKRDPTIVSA 182
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Query: 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEELIKFTFLIYDLNNDGFITREEMF 151
L++R+ FD +G + E++ G+S F ++G E+ ++F F IYD++ DG+I+ E+F
Sbjct: 40 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 99
Query: 152 QLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
Q+L+ + ++ +D ++ +V+ + D D DG+ISF++F
Sbjct: 100 QVLKMMVGNNLKDTQ----LQQIVDKTIINADKDGDGRISFEEF 139
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Query: 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEELIKFTFLIYDLNNDGFITREEMF 151
L++R+ FD +G + E++ G+S F ++G E+ ++F F IYD++ DG+I+ E+F
Sbjct: 53 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 112
Query: 152 QLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
Q+L+ + ++ +D ++ +V+ + D D DG+ISF++F
Sbjct: 113 QVLKMMVGNNLKDTQ----LQQIVDKTIINADKDGDGRISFEEF 152
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Query: 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEELIKFTFLIYDLNNDGFITREEMF 151
L++R+ FD +G + E++ G+S F ++G E+ ++F F IYD++ DG+I+ E+F
Sbjct: 54 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 113
Query: 152 QLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
Q+L+ + ++ +D ++ +V+ + D D DG+ISF++F
Sbjct: 114 QVLKMMVGNNLKDTQ----LQQIVDKTIINADKDGDGRISFEEF 153
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Query: 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEELIKFTFLIYDLNNDGFITREEMF 151
L++R+ FD +G + E++ G+S F ++G E+ ++F F IYD++ DG+I+ E+F
Sbjct: 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELF 98
Query: 152 QLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
Q+L+ + ++ +D ++ +V+ + D D DG+ISF++F
Sbjct: 99 QVLKMMVGNNLKDTQ----LQQIVDKTIINADKDGDGRISFEEF 138
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 90 EEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLIYDLNNDGFITRE 148
E + +R+F FD +G++ +E+ LS F ++ I F+F +YDL GFI R+
Sbjct: 52 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 111
Query: 149 EMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLE 207
E+ Q++ +L + D + D+++ + D DGKI ++++ V P LL+
Sbjct: 112 EVKQMVVATLAESGMNL-KDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 169
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLIYDLNNDGFITREEM 150
+ +RIF FD +GVI E+V L F E +KF F +YDL GFI REE+
Sbjct: 74 LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREEL 133
Query: 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFG 210
+++ +L+ + ++ + +V+ A + D DGKI +++ V+ P L++
Sbjct: 134 KEMVV-ALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMT 192
Query: 211 QCLPSDAARQSFLSTLQAC 229
D R +F S + +C
Sbjct: 193 LPYLKDINR-TFPSFVSSC 210
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 90 EEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLIYDLNNDGFITRE 148
E + +R+F FD +G++ +E+ LS F ++ I F+F +YDL GFI R+
Sbjct: 83 ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQ 142
Query: 149 EMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLE 207
E+ Q++ +L + D + D+++ + D DGKI ++++ V P LL+
Sbjct: 143 EVKQMVVATLAESGMNL-KDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLK 200
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLIYDLNNDGFITREEM 150
+ +RIF FD +GVI E+V L F E +KF F +YDL GFI REE+
Sbjct: 74 LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREEL 133
Query: 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLE 207
+++ +L+ + ++ + +V+ A + D DGKI +++ V+ P L++
Sbjct: 134 KEMVV-ALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIK 189
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 153
+E++F FD DG I E+V LS L+G ++ +++ F +YD++ +G I R E+ +
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNI 113
Query: 154 LRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCL 213
++ I + + + K+D + DG++S ++F + V + +LL+ + L
Sbjct: 114 IK--AIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSL 171
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 153
+E +F AFD D I E+V L+ LRGT E +K+TF IYD + +G I R+E+ +
Sbjct: 61 VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDI 120
Query: 154 LRN 156
+ +
Sbjct: 121 VES 123
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 124 GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP---DEGVRDLVELALR 180
GT E +K+ F +YD+N DG+IT+EEM ++++ + P ++ + VE
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFE 64
Query: 181 KMDYDKDGKISFQDFQQS 198
KMD ++DG ++ ++F ++
Sbjct: 65 KMDRNQDGVVTIEEFLEA 82
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D DG I
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E+++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 414
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 415 E--------MIREADIDGDGQVNYEEFVQMMT 438
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 153
+++++ FD DG + E++ ++ ++ E+ +K+ F +YD + +G I + E+ +
Sbjct: 59 IDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDM 118
Query: 154 -LRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLE 207
+ ++ Q P+E + L K+D + DG+++ ++F + + LLE
Sbjct: 119 FMAVQALNGQQTLSPEE----FINLVFHKIDINNDGELTLEEFINGMAKDQDLLE 169
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D DG I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 422
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 423 E--------MIREADIDGDGQVNYEEFVQMMT 446
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ +++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 423
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 424 E--------MIREADIDGDGQVNYEEFVQMMT 447
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIK 131
+ R F+ + F + + +F +FD DG + E+V+ L G + ++
Sbjct: 43 ITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLE 102
Query: 132 FTFLIYDLNNDGFITREE-------MFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMD 183
+ F +YD++ +G I++ E +F+++ H P+DE+ E + + K D
Sbjct: 103 WAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKD 162
Query: 184 YDK 186
DK
Sbjct: 163 DDK 165
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIK 131
+ R F+ + F + + +F +FD DG + E+V+ L G + ++
Sbjct: 44 ITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLE 103
Query: 132 FTFLIYDLNNDGFITREE-------MFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMD 183
+ F +YD++ +G I++ E +F+++ H P+DE+ E + + K D
Sbjct: 104 WAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKD 163
Query: 184 YDK 186
DK
Sbjct: 164 DDK 166
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIK 131
+ R F+ + F + + +F +FD DG + E+V+ L G + ++
Sbjct: 43 ITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLE 102
Query: 132 FTFLIYDLNNDGFITREE-------MFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMD 183
+ F +YD++ +G I++ E +F+++ H P+DE+ E + + K D
Sbjct: 103 WAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKD 162
Query: 184 YDK 186
DK
Sbjct: 163 DDK 165
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIK 131
+ R F+ + F + + +F +FD DG + E+V+ L G + ++
Sbjct: 43 ITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLE 102
Query: 132 FTFLIYDLNNDGFITREE-------MFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMD 183
+ F +YD++ +G I++ E +F+++ H P+DE+ E + + K D
Sbjct: 103 WAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKD 162
Query: 184 YDK 186
DK
Sbjct: 163 DDK 165
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D DG I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 123 E--------MIREADIDGDGQVNYEEFVQMMT 146
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L VTE + FS F G + REL + + E + + DR +G +
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTV 63
Query: 110 HLDEWVLGLSCFLRGT-NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T NEE I+ F ++D + +GF++ E+ ++ L DE+ D
Sbjct: 64 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVM-TRLGEKLSDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDF 195
E +R D D DG++++++F
Sbjct: 123 E--------MIRAADTDGDGQVNYEEF 141
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D DG I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 422
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 423 E--------MIREADIDGDGQVNYEEFVQMMT 446
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D DG I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 364 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 422
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 423 E--------MIREADIDGDGQVNYEEFVQMMT 446
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D DG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 423
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 424 E--------MIREADIDGDGQVNYEEFVQMMT 447
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIK 131
+ R F+ + F + + +F +FD DG + ++V+ L G + ++
Sbjct: 43 ITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLE 102
Query: 132 FTFLIYDLNNDGFITREE-------MFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMD 183
+ F +YD++ +G I++ E +F+++ H P+DE+ E + + K D
Sbjct: 103 WAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKD 162
Query: 184 YDK 186
DK
Sbjct: 163 DDK 165
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 49 VSGLPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCD 106
+S L + E F F +G ++ REL L T E ++ + + +
Sbjct: 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNN 60
Query: 107 GVIHLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDE 165
G ++ E+ ++ +R T+ EE ++ F I+D + DGFI+ E+ ++ N L DE
Sbjct: 61 GQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMIN-LGEKVTDE 119
Query: 166 DPDEGVRDLVELALRKMDYDKDGKISFQDF 195
+ DE +R+ D+D DG I++++F
Sbjct: 120 EIDE--------MIREADFDGDGMINYEEF 141
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIK 131
+ R F+ + F + + +F +FD DG + ++V+ L G + ++
Sbjct: 43 ITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLE 102
Query: 132 FTFLIYDLNNDGFITREE-------MFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMD 183
+ F +YD++ +G I++ E +F+++ H P+DE+ E + + K D
Sbjct: 103 WAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKD 162
Query: 184 YDK 186
DK
Sbjct: 163 DDK 165
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 424
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 425 E--------MIREADIDGDGQVNYEEFVQMMT 448
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 124 E--------MIREADIDGDGQVNYEEFVQMMT 147
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 423
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 424 E--------MIREADIDGDGQVNYEEFVQMMT 447
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 67
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 68 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 126
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 127 E--------MIREADIDGDGQVNYEEFVQMMT 150
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 124 E--------MIREADIDGDGQVNYEEFVQMMT 147
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 124 E--------MIREADIDGDGQVNYEEFVQMMT 147
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 389
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 390 E--------MIREADIDGDGQVNYEEFVQMMT 413
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 389
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 390 E--------MIREADIDGDGQVNYEEFVQMMT 413
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 65
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 66 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 124
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 125 E--------MIREADIDGDGQVNYEEFVQMMT 148
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 423
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 424 E--------MIREADIDGDGQVNYEEFVQMMT 447
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 120
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 121 E--------MIREADIDGDGQVNYEEFVQMMT 144
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 124 E--------MIREADIDGDGQVNYEEFVQMMT 147
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 119
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 120 E--------MIREADIDGDGQVNYEEFVQMMT 143
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 386
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 387 E--------MIREADIDGDGQVNYEEFVQMMT 410
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 123 E--------MIREADIDGDGQVNYEEFVQMMT 146
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 120
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 121 E--------MIREADIDGDGQVNYEEFVQMMT 144
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 69
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 70 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 128
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 129 E--------MIREADIDGDGQVNYEEFVQMMT 152
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 123 E--------MIREADIDGDGQVNYEEFVQMMT 146
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
+ + F +YDL+ DG I+R EM Q+LR L+ Q +E + ++ + +++ D D DG
Sbjct: 116 LHYAFQLYDLDRDGKISRHEMLQVLR--LMVGVQ--VTEEQLENIADRTVQEADEDGDGA 171
Query: 190 ISFQDFQQSV 199
+SF +F +S+
Sbjct: 172 VSFVEFTKSL 181
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 121
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 122 E--------MIREADIDGDGQVNYEEFVQMMT 145
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEXLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 124 E--------MIREADIDGDGQVNYEEFVQMMT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEXLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 123 E--------MIREADIDGDGQVNYEEFVQMMT 146
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 423
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q +T
Sbjct: 424 E--------MIREADIDGDGQVNYEEFVQMMT 447
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 57 VTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEW 114
+ E + FS F G + +EL + + E ++ + D +G I E+
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 115 VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDL 174
+ ++ ++ T+ E I+ F ++D + +G+I+ E+ ++ N L DE+ DE
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDE----- 118
Query: 175 VELALRKMDYDKDGKISFQDFQQSVT 200
+R+ + D DG++++++F Q +T
Sbjct: 119 ---MIREANIDGDGQVNYEEFVQMMT 141
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 57 VTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEW 114
+ E + FS F G + +EL + + E ++ + D +G I E+
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 115 VLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173
+ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ DE
Sbjct: 67 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDE---- 121
Query: 174 LVELALRKMDYDKDGKISFQDFQQSVT 200
+R+ D D DG++++++F Q +T
Sbjct: 122 ----MIREADIDGDGQVNYEEFVQMMT 144
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDF 195
E +R+ D D DG++++++F
Sbjct: 123 E--------MIREADIDGDGQVNYEEF 141
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDF 195
E +R+ D D DG++++++F
Sbjct: 124 E--------MIREADIDGDGQVNYEEF 142
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 57 VTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEW 114
+ E + FS F G + +EL + + E ++ + D +G I E+
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 115 VLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173
+ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ DE
Sbjct: 65 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDE---- 119
Query: 174 LVELALRKMDYDKDGKISFQDFQQSVT 200
+R+ D D DG++++++F Q +T
Sbjct: 120 ----MIREADIDGDGQVNYEEFVQMMT 142
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
+ +R+ D D DG++++++F Q +T
Sbjct: 124 Q--------MIREADIDGDGQVNYEEFVQMMT 147
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDF 195
E +R+ D D DG++++++F
Sbjct: 124 E--------MIREADIDGDGQVNYEEF 142
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDF 195
E +R+ D D DG++++++F
Sbjct: 123 E--------MIREADIDGDGQVNYEEF 141
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDF 195
E +R+ D D DG++++++F
Sbjct: 124 E--------MIRESDIDGDGQVNYEEF 142
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE +K F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQ 197
E +R+ D D DG++++++F Q
Sbjct: 123 E--------MIREADVDGDGQVNYEEFVQ 143
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 35/60 (58%)
Query: 95 ERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLL 154
+ +F +FD DG + E+V+ L G + +++ F +YD++ +G I++ E+ +++
Sbjct: 74 QHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIV 133
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE I+ F ++D + +G+I+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ + D DG++++++F Q +T
Sbjct: 123 E--------MIREANIDGDGQVNYEEFVQMMT 146
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G +EE ++ F I+D N DGFI EE+ ++LR + H +ED +E ++
Sbjct: 91 KGKSEEELEDCFRIFDKNADGFIDIEELGEILR-ATGEHVTEED--------IEDLMKDS 141
Query: 183 DYDKDGKISFQDF 195
D + DG+I F +F
Sbjct: 142 DKNNDGRIDFDEF 154
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 18/136 (13%)
Query: 33 SNAGVPISTST-PVVVQVSGLPPSN-----VTERYK--GFSPFSFQGLDRVVFRELLHNT 84
++ G IST V+++ G P+ + E G F+ ++ R++ +
Sbjct: 31 ADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA 90
Query: 85 FDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN----EELIKFTFLIYDLN 140
EE+ E F FD+ DG I ++E L LR T EE I+ D N
Sbjct: 91 KGKSEEEL--EDCFRIFDKNADGFIDIEE----LGEILRATGEHVTEEDIEDLMKDSDKN 144
Query: 141 NDGFITREEMFQLLRN 156
NDG I +E +++
Sbjct: 145 NDGRIDFDEFLKMMEG 160
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE +K F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 64 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQ 197
E +R+ D D DG++++++F Q
Sbjct: 123 E--------MIREADVDGDGQVNYEEFVQ 143
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE +K F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVD 119
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQ 197
E +R+ D D DG++++++F Q
Sbjct: 120 E--------MIREADVDGDGQVNYEEFVQ 140
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G +EE + F I+D N DGFI EE+ ++LR + H +ED +E ++
Sbjct: 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILR-ATGEHVTEED--------IEDLMKDS 141
Query: 183 DYDKDGKISFQDF 195
D + DG+I F +F
Sbjct: 142 DKNNDGRIDFDEF 154
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTI 63
Query: 110 HLDEWVLGLS-CFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
+ E++ + C +EE I+ F ++D + +G+I+ E+ + N L DE+ D
Sbjct: 64 NFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q T
Sbjct: 123 E--------XIREADIDGDGQVNYEEFVQXXT 146
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G +EE + F I+D N DGFI EE+ ++LR + H +ED +E ++
Sbjct: 88 KGKSEEELANCFRIFDKNADGFIDIEELGEILR-ATGEHVTEED--------IEDLMKDS 138
Query: 183 DYDKDGKISFQDF 195
D + DG+I F +F
Sbjct: 139 DKNNDGRIDFDEF 151
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDE 169
E++ ++ ++ + EE I+ F ++D + +GFI+ E+ ++ N L DE+ DE
Sbjct: 64 DFPEFLTMMARKMKDSEEE-IREAFRVFDKDGNGFISAAELRHVMTN-LGEKLTDEEVDE 121
Query: 170 GVRDLVELALRKMDYDKDGKISFQDF 195
+R+ D D DG++++++F
Sbjct: 122 --------MIREADIDGDGQVNYEEF 139
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G +EE + F I+D N DGFI EE+ ++LR + H +ED +E ++
Sbjct: 91 KGKSEEELADCFRIFDKNADGFIDIEELGEILR-ATGEHVTEED--------IEDLMKDS 141
Query: 183 DYDKDGKISFQDF 195
D + DG+I F +F
Sbjct: 142 DKNNDGRIDFDEF 154
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G +EE + F I+D N DG+I EE+ ++ R S H DE+ +E ++
Sbjct: 88 KGKSEEELAECFRIFDRNADGYIDAEELAEIFRASG-EHVTDEE--------IESLMKDG 138
Query: 183 DYDKDGKISFQDF 195
D + DG+I F +F
Sbjct: 139 DKNNDGRIDFDEF 151
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 94 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149
++ I D G I +E+ V + +G +EE + F I+D N DG+I EE
Sbjct: 55 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEE 114
Query: 150 MFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
+ ++ R S H DE+ +E ++ D + DG+I F +F
Sbjct: 115 LAEIFRASG-EHVTDEE--------IESLMKDGDKNNDGRIDFDEF 151
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 132 FTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEG-VRDLVELALRKMDYDKDGKI 190
+ F I+D ++DG + RE++ +L+ N L +D ++ L++ L + D D+DG I
Sbjct: 102 YAFRIFDFDDDGTLNREDLSRLV-NCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTI 160
Query: 191 SFQDFQQSVTDEPLLLEAFGQCL 213
+ +FQ ++ P +F L
Sbjct: 161 NLSEFQHVISRSPDFASSFKIVL 183
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 132 FTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEG-VRDLVELALRKMDYDKDGKI 190
+ F I+D ++DG + RE++ +L+ N L +D ++ L++ L + D D+DG I
Sbjct: 133 YAFRIFDFDDDGTLNREDLSRLV-NCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTI 191
Query: 191 SFQDFQQSVTDEPLLLEAF 209
+ +FQ ++ P +F
Sbjct: 192 NLSEFQHVISRSPDFASSF 210
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G +EE + F I+D N DGFI EE+ ++LR + H +ED +E ++
Sbjct: 91 KGKSEEELANCFRIFDKNADGFIDIEELGEILR-ATGEHVIEED--------IEDLMKDS 141
Query: 183 DYDKDGKISFQDF 195
D + DG+I F +F
Sbjct: 142 DKNNDGRIDFDEF 154
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G +EE + F I+D N DGFI EE+ ++LR + H +ED +E ++
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATG-EHVIEED--------IEDLMKDS 55
Query: 183 DYDKDGKISFQDF 195
D + DG+I F +F
Sbjct: 56 DKNNDGRIDFDEF 68
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 12/147 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L ++E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE +K F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDF 195
E +R+ D D DG+I++++F
Sbjct: 124 E--------MIREADVDGDGQINYEEF 142
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 15/122 (12%)
Query: 75 VVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN-EELIKFT 133
V R L N TEE L + I D +G I DE++ ++ ++ T+ EE +K
Sbjct: 34 TVIRSLDQNP----TEEELQDMI-SEVDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEA 88
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQ 193
F ++D + +G+I+ E+ ++ N L DE+ VE +++ D D DG+++++
Sbjct: 89 FKVFDKDQNGYISASELRHVMIN-LGEKLTDEE--------VEQMIKEADLDGDGQVNYE 139
Query: 194 DF 195
+F
Sbjct: 140 EF 141
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+ E+++ F F ++D + DG IT EE+ ++R SL +P +E+ ++D++ ++
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIR-SLDQNPTEEE----LQDMI----SEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIEFDEF 68
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD 185
+EE I+ F ++D + +G+I+ ++ ++ N L DE+ DE +R+ D D
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTN-LGEKLTDEEVDEMIRE--------ADID 55
Query: 186 KDGKISFQDFQQSVT 200
DG+++++DF Q +T
Sbjct: 56 GDGQVNYEDFVQMMT 70
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 9/74 (12%)
Query: 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDK 186
EE I+ F ++D + +G+I+ E+ ++ N L DE+ DE +R+ D D
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIRE--------ADIDG 51
Query: 187 DGKISFQDFQQSVT 200
DG++++++F Q +T
Sbjct: 52 DGQVNYEEFVQMMT 65
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD 185
+EE I+ F ++D + +G+I+ E+ ++ N L DE+ DE +R+ D D
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIRE--------ADID 57
Query: 186 KDGKISFQDFQQSVT 200
DG++++++F Q +T
Sbjct: 58 GDGQVNYEEFVQMMT 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD 185
+EE I+ F ++D + +G+I+ E+ ++ N L DE+ DE +R+ D D
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIRE--------ADID 53
Query: 186 KDGKISFQDFQQSVT 200
DG++++++F Q +T
Sbjct: 54 GDGQVNYEEFVQMMT 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 38.5 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD 185
+EE I+ F ++D + +G+I+ E+ ++ N L DE+ DE +R+ D D
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIRE--------ADID 56
Query: 186 KDGKISFQDFQQSVT 200
DG++++++F Q +T
Sbjct: 57 GDGQVNYEEFVQMMT 71
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 38.1 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD 185
+EE I+ F ++D + +G+I+ E+ ++ N L DE+ DE +R+ D D
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIRE--------ADID 54
Query: 186 KDGKISFQDFQQSVT 200
DG++++++F Q +T
Sbjct: 55 GDGQVNYEEFVQMMT 69
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ D +G I
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ + + T+ EE I+ F ++D + +G+I+ E+ + N L DE+ D
Sbjct: 64 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN-LGEKLTDEEVD 122
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
E +R+ D D DG++++++F Q T
Sbjct: 123 E--------XIREADIDGDGQVNYEEFVQXXT 146
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L ++E + FS F G + +EL + + E ++ + D +G I
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ ++ ++ T+ EE +K F ++D + +GFI+ E+ ++ N L DE+ D
Sbjct: 65 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDF 195
E +R+ D D DG+I++ +F
Sbjct: 124 E--------MIREADVDGDGQINYDEF 142
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 13/77 (16%)
Query: 124 GTNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRK 181
G EEL + F D N G + REE F+ L L P D E ++
Sbjct: 21 GDGEELARLRSVFAACDANRSGRLEREE-FRALCTELRVRPAD----------AEAVFQR 69
Query: 182 MDYDKDGKISFQDFQQS 198
+D D+DG I+FQ+F +
Sbjct: 70 LDADRDGAITFQEFARG 86
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 37.0 bits (84), Expect = 0.009, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD 185
+EE +K F ++D + +GFI+ E+ ++ N L DE+ DE +R+ D D
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIRE--------ADVD 52
Query: 186 KDGKISFQDF 195
DG+I++++F
Sbjct: 53 GDGQINYEEF 62
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
+ F F +YDL+ D I+R+E+ Q+LR + + DE + + + +++ D D D
Sbjct: 115 LHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQ----LGSIADRTIQEADQDGDSA 170
Query: 190 ISFQDF 195
ISF +F
Sbjct: 171 ISFTEF 176
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + FS F G + +EL + + E ++ D +G I
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTI 64
Query: 110 HLDEWVLGLSCFLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD 168
E++ + + T+ EE I+ F ++D + +G+I+ E+ + N L DE+ D
Sbjct: 65 DFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTN-LGEKLTDEEVD 123
Query: 169 EGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
+ +R+ D D DG++++++F Q T
Sbjct: 124 Q--------XIREADIDGDGQVNYEEFVQXXT 147
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 37.0 bits (84), Expect = 0.010, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD 185
+EE I+ F ++D + +G+I+ E+ ++ N L DE+ DE +R+ D D
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIRE--------ADID 53
Query: 186 KDGKISFQDFQQ 197
DG++++++F Q
Sbjct: 54 GDGQVNYEEFVQ 65
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
+ F F +YDL+ D I+R+E+ Q+LR + + DE + + + +++ D D D
Sbjct: 115 LHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQ----LGSIADRTIQEADQDGDSA 170
Query: 190 ISFQDF 195
ISF +F
Sbjct: 171 ISFTEF 176
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Query: 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKD 187
E I+ F ++D + +GFI+++E+ +R SL P + + +E+ ++++D D D
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMR-SLGYMPNEVE--------LEVIIQRLDMDGD 86
Query: 188 GKISFQDF 195
G++ F++F
Sbjct: 87 GQVDFEEF 94
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDL--VELALRKMDY 184
++LI F ++D++NDG IT E+ +L N ++ + RD+ V+ +R +D
Sbjct: 121 KKLIYCAFRVFDVDNDGEITTAELAHILYNG------NKKGNITQRDVNRVKRMIRDVDK 174
Query: 185 DKDGKISFQDFQQ 197
+ DGKI F +F +
Sbjct: 175 NNDGKIDFHEFSE 187
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKD 187
E +K TFL+ D + G+IT+E++ + L + P + D L L ++D D
Sbjct: 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFD----------LLLDQIDSDGS 101
Query: 188 GKISFQDFQQSVTDEPLLLEAFGQC 212
GKI + +F + D L + C
Sbjct: 102 GKIDYTEFIAAALDRKQLSKKLIYC 126
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD 185
+EE I+ F + D + +G+I+ E+ ++ N L DE+ DE +R+ D D
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTN-LGEKLTDEEVDE--------MIREADID 77
Query: 186 KDGKISFQDFQQSVT 200
DG++++++F Q +T
Sbjct: 78 GDGQVNYEEFVQMMT 92
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 62 KGFSPFSFQGLDRVVFRELLHNTF-------DLVTEEILMERIFCAFDRLCDGVIHLDEW 114
+G + F F+ LDR R L + F LV ++ E + +DR G + L+E+
Sbjct: 37 QGLARF-FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 115 VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDL 174
+ L + E +I F D + DG +T +++ + S +HP+ + ++
Sbjct: 96 LRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVY--SGRAHPKVRSGEWTEDEV 153
Query: 175 VELALRKMD-YDKDGKISFQDFQ 196
+ L D +KDG+++ +FQ
Sbjct: 154 LRRFLDNFDSSEKDGQVTLAEFQ 176
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDL--VELALR 180
R +++LI F ++D++NDG IT E+ +L N ++ + RD+ V+ +R
Sbjct: 120 RQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNG------NKRGNITERDVNQVKKMIR 173
Query: 181 KMDYDKDGKISFQDFQQ 197
++D + DGKI F +F +
Sbjct: 174 EVDKNGDGKIDFYEFSE 190
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Query: 107 GVIHLDEW-VLGLSCFL---RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHP 162
G + DE+ V+ + C +G EE + F ++D N DG+I EE+ +L+ + +
Sbjct: 70 GTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 163 QDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
+D+ +E ++ D + DG+I + +F
Sbjct: 130 EDD---------IEELMKDGDKNNDGRIDYDEF 153
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITRE 148
TEE L + +F FD+ DG I L+E + L E+ I+ D NNDG I +
Sbjct: 93 TEEELSD-LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 149 EMFQLLRN 156
E + ++
Sbjct: 152 EFLEFMKG 159
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 33.9 bits (76), Expect = 0.085, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKD 187
E ++ F +D + DG IT +E+ + + PQ+E ++ +R+ D D+D
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEE---------LDAMIREADVDQD 56
Query: 188 GKISFQDFQQSVTDE 202
G++++++F + + E
Sbjct: 57 GRVNYEEFARMLAQE 71
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 122 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRK 181
L+G + +K F I D + GFI EE+ +L+ +H +D + E + L
Sbjct: 35 LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLK-GFSAHGRDLNDTE-----TKALLAA 88
Query: 182 MDYDKDGKISFQDFQQSVT 200
D D DGKI +F + V
Sbjct: 89 GDSDHDGKIGADEFAKMVA 107
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
++ F +D N DG I+ E+ + +R +L+ H G RD+ E+ +R +D + DG+
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMR-ALLGHQV------GHRDIEEI-IRDVDLNGDGR 141
Query: 190 ISFQDF 195
+ F++F
Sbjct: 142 VDFEEF 147
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 32.7 bits (73), Expect = 0.18, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDK 186
EE +K F ++D + +G+I+ E+ ++ N L DE+ VE +++ D D
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEE--------VEQMIKEADLDG 53
Query: 187 DGKISFQDF 195
DG++++++F
Sbjct: 54 DGQVNYEEF 62
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 97 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155
+F FD+ DG I LDE + L E+ I+ D NNDG I +E + ++
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLEFMK 158
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 94 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149
++ + D G + DE+ V + +G +EE + F ++D N DG+I +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 150 MFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISF 192
+ +L+ + + +D+ +E ++ D + DG+I +
Sbjct: 117 LKIMLQATGETITEDD---------IEELMKDGDKNNDGRIDY 150
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 94 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149
++ + D G + DE+ V + +G +EE + F ++D N DG+I EE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 150 MFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
+ +L+ + + +D+ +E ++ D + DG+I + +F
Sbjct: 117 LKIMLQATGETITEDD---------IEELMKDGDKNNDGRIDYDEF 153
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 97 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156
+F FD+ DG I L+E + L E+ I+ D NNDG I +E + ++
Sbjct: 100 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
++ F +D N DG I+ E+ + +R L+ H G RD+ E+ +R +D + DG+
Sbjct: 104 LRDAFREFDTNGDGEISTSELREAMR-KLLGHQV------GHRDIEEI-IRDVDLNGDGR 155
Query: 190 ISFQDF 195
+ F++F
Sbjct: 156 VDFEEF 161
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
++ F +D N DG I+ E+ + +R L+ H G RD+ E+ +R +D + DG+
Sbjct: 90 LRDAFREFDTNGDGEISTSELREAMR-KLLGHQV------GHRDIEEI-IRDVDLNGDGR 141
Query: 190 ISFQDF 195
+ F++F
Sbjct: 142 VDFEEF 147
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 94 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149
++ + D G + DE+ V + +G EE + F ++D N DG+I EE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 150 MFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
+ +L+ + + +D+ +E ++ D + DG+I + +F
Sbjct: 117 LKIMLQATGETITEDD---------IEELMKDGDKNNDGRIDYDEF 153
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITRE 148
TEE L + +F FD+ DG I L+E + L E+ I+ D NNDG I +
Sbjct: 93 TEEELSD-LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 149 EMFQLLRN 156
E + ++
Sbjct: 152 EFLEFMKG 159
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 32.3 bits (72), Expect = 0.22, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 122 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRK 181
++G +EE + F ++D N DG+I EE+ +L+ + + +D+ +E ++
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD---------IEELMKD 51
Query: 182 MDYDKDGKISFQDF 195
D + DG+I + +F
Sbjct: 52 GDKNNDGRIDYDEF 65
Score = 27.3 bits (59), Expect = 6.8, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 153
+ +F FD+ DG I L+E + L E+ I+ D NNDG I +E +
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 68
Query: 154 LR 155
++
Sbjct: 69 MK 70
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 32.3 bits (72), Expect = 0.23, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
++ F +D N DG I+ E+ + +R L+ H G RD+ E+ +R +D + DG+
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRK-LLGH------QVGHRDIEEI-IRDVDLNGDGR 60
Query: 190 ISFQDF 195
+ F++F
Sbjct: 61 VDFEEF 66
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 97 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155
+F FD+ DG I LDE + L E+ I+ D NNDG I +E + ++
Sbjct: 100 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLEFMK 158
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 94 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149
++ + D G + DE+ V + +G +EE + F ++D N DG+I +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 150 MFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
+ +L+ + + +D+ +E ++ D + DG+I + ++
Sbjct: 117 LKIMLQATGETITEDD---------IEELMKDGDKNNDGRIDYDEW 153
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Query: 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDK 186
EE +K F ++D + +G+I+ E+ ++ N L DE+ VE +++ D D
Sbjct: 8 EEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEE--------VEQMIKEADLDG 58
Query: 187 DGKISFQDF 195
DG++++++F
Sbjct: 59 DGQVNYEEF 67
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+ E+++ F F ++D + DG IT EE+ ++R SL +P +E+ ++D++ ++
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIR-SLDQNPTEEE----LQDMI----SEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIEFDEF 68
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+ E+++ F F ++D + DG IT EE+ ++R SL +P +E+ ++D++ ++
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIR-SLDQNPTEEE----LQDMI----SEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIEFDEF 68
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 32.0 bits (71), Expect = 0.33, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 125 TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDY 184
+ EELI+ F ++D + +G I+ E+ ++ N L D++ DE +R+ D
Sbjct: 6 SEEELIE-AFKVFDRDGNGLISAAELRHVMTN-LGEKLTDDEVDEMIRE--------ADI 55
Query: 185 DKDGKISFQDF 195
D DG I++++F
Sbjct: 56 DGDGHINYEEF 66
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 48/165 (29%)
Query: 75 VVFRELLHNTFDLVTEEILME--RIFCAFDRLCDGVI-------------------HLDE 113
++ +L +NT D +TEE + E F FD+ DG I L +
Sbjct: 292 ILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQD 351
Query: 114 WVLGLSCFLRGT------------------NEELIKFTFLIYDLNNDGFITREEMFQLLR 155
+ + GT +EE I+ F ++ + +G+I+ ++ ++
Sbjct: 352 MINEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMT 411
Query: 156 NSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200
N L DE+ DE +R+ D DG+++++ F Q +T
Sbjct: 412 N-LGEKLTDEEVDE--------MIREAGIDGDGQVNYEQFVQMMT 447
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 31.2 bits (69), Expect = 0.45, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G EE + F ++D N DG+I EE+ +L+ + + +D+ +E ++
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD---------IEELMKDG 55
Query: 183 DYDKDGKISFQDF 195
D + DG+I + +F
Sbjct: 56 DKNNDGRIDYDEF 68
Score = 28.5 bits (62), Expect = 3.2, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITRE 148
TEE L + +F FD+ DG I L+E + L E+ I+ D NNDG I +
Sbjct: 8 TEEELSD-LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
Query: 149 EMFQLLR 155
E + ++
Sbjct: 67 EFLEFMK 73
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF 195
D D DG I F +F
Sbjct: 56 DADGDGTIDFPEF 68
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 94 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149
++ + D G + DE+ V + +G +EE + F ++D N DG+I +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDE 116
Query: 150 MFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
+ +L+ + + +D+ +E ++ D + DG+I + +F
Sbjct: 117 LKIMLQATGETITEDD---------IEELMKDGDKNNDGRIDYDEF 153
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 97 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155
+F +D+ DG I LDE + L E+ I+ D NNDG I +E + ++
Sbjct: 100 LFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + F+ F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLR--GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP 167
E++ ++ ++ + EELI+ F ++D + +G I+ E+ ++ N L D++
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIE-AFKVFDRDGNGLISAAELRHVMTN-LGEKLTDDEV 121
Query: 168 DEGVRDLVELALRKMDYDKDGKISFQDF 195
DE +R+ D D DG I++++F
Sbjct: 122 DE--------MIREADIDGDGHINYEEF 141
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF-------QQSVTDEPLLLEAF------GQCLPSDAARQSFLSTL 226
D D +G I F +F + E L+EAF G L S A + ++ L
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL 112
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 52 LPPSNVTERYKGFSPFSFQGLDRVVFREL--LHNTFDLVTEEILMERIFCAFDRLCDGVI 109
L + E + F+ F G + +EL + + E ++ + D +G I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 110 HLDEWVLGLSCFLR--GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP 167
E++ ++ ++ + EELI+ F ++D + +G I+ E+ ++ N L D++
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIE-AFKVFDRDGNGLISAAELRHVMTN-LGEKLTDDEV 121
Query: 168 DEGVRDLVELALRKMDYDKDGKISFQDF 195
DE +R+ D D DG I++++F
Sbjct: 122 DE--------MIREADIDGDGHINYEEF 141
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF-------QQSVTDEPLLLEAF------GQCLPSDAARQSFLSTL 226
D D +G I F +F + E L+EAF G L S A + ++ L
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL 112
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
+G EE + F ++D N DG+I EE+ +L+ + + +D+ +E ++
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD---------IEELMKDG 60
Query: 183 DYDKDGKISFQDF 195
D + DG+I + +F
Sbjct: 61 DKNNDGRIDYDEF 73
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITRE 148
TEE L + +F FD+ DG I L+E + L E+ I+ D NNDG I +
Sbjct: 13 TEEELSD-LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 71
Query: 149 EMFQLLR 155
E + ++
Sbjct: 72 EFLEFMK 78
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 18/94 (19%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D +N+G I+ E+ ++R+ +S + E V DL + ++
Sbjct: 6 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE-----VNDL----MNEI 56
Query: 183 DYDKDGKISFQDF-------QQSVTDEPLLLEAF 209
D D + +I F +F +S E LLEAF
Sbjct: 57 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAF 90
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F +YD + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMR-SLGLNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 138 DLNNDGFITREEM------FQLLR----NSLISHPQDEDPDEGVRDLVELALRKMDYDKD 187
D NNDG + R+E+ F L+ NSLI ++ + D ++ + +D D
Sbjct: 341 DTNNDGMLDRDELVRGYHEFMRLKGVDSNSLI-----QNEGSTIEDQIDSLMPLLDMDGS 395
Query: 188 GKISFQDFQQSVTDEPLLL 206
G I + +F S D +LL
Sbjct: 396 GSIEYSEFIASAIDRTILL 414
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 64/174 (36%), Gaps = 36/174 (20%)
Query: 40 STSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVT--EEILMERI 97
S+ TP + + L + R FQ ++ LL+ L T E + I
Sbjct: 284 SSETPTISDLPSLESAMTNIR-------QFQAEKKLAQAALLYMASKLTTLDETKQLTEI 336
Query: 98 FCAFDRLCDGVIHLDEWVLGLSCFLR--------------GTNEELIKFTFLIYDLNNDG 143
F D DG++ DE V G F+R T E+ I + D++ G
Sbjct: 337 FRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSG 396
Query: 144 FITREEMF--QLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
I E + R L+S R+ +E A + D D GKIS ++
Sbjct: 397 SIEYSEFIASAIDRTILLS-----------RERMERAFKMFDKDGSGKISTKEL 439
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 24/117 (20%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D +N+G I+ E+ ++R+ +S + E V DL + ++
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE-----VNDL----MNEI 55
Query: 183 DYDKDGKISFQDF-------QQSVTDEPLLLEAF------GQCLPSDAARQSFLSTL 226
D D + +I F +F +S E LLEAF G L S A + L+++
Sbjct: 56 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI 112
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 18/94 (19%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D +N+G I+ E+ ++R+ +S + E V DL + ++
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE-----VNDL----MNEI 55
Query: 183 DYDKDGKISFQDF-------QQSVTDEPLLLEAF 209
D D + +I F +F +S E LLEAF
Sbjct: 56 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAF 89
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 94 MERIFCAFDRLCDGVIHLDEW----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149
++ + D G + DE+ V + +G +EE + F + D N DG+I +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE 116
Query: 150 MFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
+ +L+ + + +D+ +E ++ D + DG+I + +F
Sbjct: 117 LKIMLQATGETITEDD---------IEELMKDGDKNNDGRIDYDEF 153
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 97 IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155
+F D+ DG I LDE + L E+ I+ D NNDG I +E + ++
Sbjct: 100 LFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDK 186
EE +K T+ YD ++ GFI EE+ L++ L+ D + + +L L+ D +
Sbjct: 103 EEFMK-TWRKYDTDHSGFIETEELKNFLKD-LLEKANKTVDDTKLAEYTDLMLKLFDSNN 160
Query: 187 DGKISF 192
DGK+
Sbjct: 161 DGKLEL 166
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 141 NDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195
N+ I++ E + L + Q++ D GV D + ++K+D D DG++ FQ+F
Sbjct: 28 NNTKISKTEFLIFMNTELAAFTQNQ-KDPGVLDRM---MKKLDLDSDGQLDFQEF 78
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDED--PDEGVRDLVELALRKMDYDKDGKIS 191
F D N DG + R E+ + + + QD V V+ L +D+DK+G I
Sbjct: 365 FHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIE 424
Query: 192 FQDFQQSVTDEPLLL 206
+ +F D LL
Sbjct: 425 YSEFVTVAMDRKTLL 439
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDED--PDEGVRDLVELALRKMDYDKDGKIS 191
F D N DG + R E+ + + + QD V V+ L +D+DK+G I
Sbjct: 364 FHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIE 423
Query: 192 FQDFQQSVTDEPLLL 206
+ +F D LL
Sbjct: 424 YSEFVTVAMDRKTLL 438
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 124 GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMD 183
G +EE + F ++D N DG+I +E+ +L+ + + +D+ +E ++ D
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDD---------IEELMKDGD 52
Query: 184 YDKDGKISFQDF 195
+ DG+I + +F
Sbjct: 53 KNNDGRIDYDEF 64
Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 153
+ +F FD+ DG I LDE + L E+ I+ D NNDG I +E +
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 67
Query: 154 LR 155
++
Sbjct: 68 MK 69
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 138 DLNNDGFITREEMFQLLRNSLISHPQDED--PDEGVRDLVELALRKMDYDKDGKISFQDF 195
D N DG + R E+ + + + QD V V+ L +D+DK+G I + +F
Sbjct: 345 DKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEF 404
Query: 196 QQSVTDEPLLL 206
D LL
Sbjct: 405 VTVAMDRKTLL 415
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQ 193
F +D N DG I+ E+ + L+ +L S DE V+ + ++D D DG ISFQ
Sbjct: 15 FKRFDANGDGKISAAELGEALK-TLGSITPDE---------VKHMMAEIDTDGDGFISFQ 64
Query: 194 DF 195
+F
Sbjct: 65 EF 66
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMIN----EV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMIN----EV 56
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 57 DADGNGTIDFPEF 69
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMIN----EV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T+E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TDEQISEFKEAFSLFDKDGDGCITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFI 145
MERIF FD DG I L E L L T+ + ++ D + DGFI
Sbjct: 4 MERIFKRFDTNGDGKISLSELTDALRT-LGSTSADEVQRMMAEIDTDGDGFI 54
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQ 193
F +D N DG I+ E+ LR +L S DE V+ + ++D D DG I F
Sbjct: 8 FKRFDTNGDGKISLSELTDALR-TLGSTSADE---------VQRMMAEIDTDGDGFIDFN 57
Query: 194 DFQQSVTDEPLLLE 207
+F P L++
Sbjct: 58 EFISFCNANPGLMK 71
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D + DG IT +E+ ++R SL +P + + ++D++ ++
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAE----LQDMI----NEV 55
Query: 183 DYDKDGKISFQDF 195
D D +G I F +F
Sbjct: 56 DADGNGTIDFPEF 68
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 138 DLNNDGFITREEMFQLLRNSLISHPQDEDPD---EGVRDLVELALRKMDYDKDGKISFQD 194
D N DG + R+E+ + R L+ D D + V+ L+ +D+D++G I + +
Sbjct: 324 DNNGDGQLDRKELIEGYRK-LMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSE 382
Query: 195 FQQSVTDEPLLL 206
F D+ LLL
Sbjct: 383 FVTVCMDKQLLL 394
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFI 145
MERIF FD DG I L E L L T+ + ++ D + DGFI
Sbjct: 5 MERIFKRFDTNGDGKISLSELTDALRT-LGSTSADEVQRMMAEIDTDGDGFI 55
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQ 193
F +D N DG I+ E+ LR +L S DE V+ + ++D D DG I F
Sbjct: 9 FKRFDTNGDGKISLSELTDALR-TLGSTSADE---------VQRMMAEIDTDGDGFIDFN 58
Query: 194 DFQQSVTDEPLLLE 207
+F P L++
Sbjct: 59 EFISFCNANPGLMK 72
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDED--PDEGVRDLVELALRKMDYDKDGKIS 191
F D N DG + R E+ + + QD V V+ L +D+DK+G I
Sbjct: 341 FHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYIE 400
Query: 192 FQDFQQSVTDEPLLL 206
+ +F D LL
Sbjct: 401 YSEFVTVAXDRKTLL 415
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D +N+G I+ E+ ++R+ +S + E V DL + ++
Sbjct: 5 TEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE-----VNDL----MNEI 55
Query: 183 DYDKDGKISFQDF 195
D D + +I F +F
Sbjct: 56 DVDGNHQIEFSEF 68
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 126 NEELIKFTFLIYDLNNDGFITREEMFQLLR 155
+EE + F I+D N DG+I EE+ ++LR
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEILR 32
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 29/138 (21%)
Query: 69 FQGLDRVVFRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 126
FQ ++ LL+ L ++E E IF D+ DG + E + G S +
Sbjct: 38 FQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKL---SG 94
Query: 127 EELIKFTF-----------LIYDLNNDGFITREEMFQLL--RNSLISHPQDEDPDEGVRD 173
EE+ F D + +G+I E + R SL+S +D
Sbjct: 95 EEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS-----------KD 143
Query: 174 LVELALRKMDYDKDGKIS 191
+E A +K D D +GKIS
Sbjct: 144 KLESAFQKFDQDGNGKIS 161
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 95 ERIFCAFDRLCDGVIHLDEWVL--GLSCFLRGTNEELIKFTFLIYDLNNDGFITREEM 150
E +F FD+ G I LDEW G+S ++E + TF DL+N G + +EM
Sbjct: 119 EAVFDIFDKDGSGSISLDEWKTYGGISGIC--PSDEDAEKTFKHCDLDNSGKLDVDEM 174
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 138 DLNNDGFITREEM---FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQD 194
D N DG + ++E+ + +LRN + ++ +E V ++ L+++D+DK+G I + +
Sbjct: 365 DKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNI----LKEVDFDKNGYIEYSE 420
Query: 195 FQQSVTDEPLLL 206
F D+ +L
Sbjct: 421 FISVCMDKQILF 432
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQ 193
F YD +N G I + E+ Q L +S ++ +RK D G+I+F
Sbjct: 77 FRTYDRDNSGMIDKNELKQALSGYRLSDQ-----------FHDILIRKFDRQGRGQIAFD 125
Query: 194 DFQQS 198
DF Q
Sbjct: 126 DFIQG 130
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
Query: 95 ERIFCAFDRLCDGVIHLDEW-----VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149
+ +F FD+ G I LDEW + G+S +EE + TF DL+N G + +E
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGRISGIS-----PSEEDCEKTFQHCDLDNSGELDVDE 170
Query: 150 M 150
M
Sbjct: 171 M 171
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 121 FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDL-VELAL 179
++R +EE I F ++D N DG I +E F+ + + P + D VE A+
Sbjct: 1 WVRQDDEEEILRAFKVFDANGDGVIDFDE-FKFIMQKVGEEP--------LTDAEVEEAM 51
Query: 180 RKMDYDKDGKISFQDF 195
++ D D +G I +F
Sbjct: 52 KEADEDGNGVIDIPEF 67
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 68 SFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE 127
F+ L ++ N L+ E + +F FD+ G I LDEW ++
Sbjct: 91 GFKQLATSELKKWARNEPTLIRE--WGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 148
Query: 128 ELIKFTFLIYDLNNDGFITREEM 150
E + TF DL+N G + +EM
Sbjct: 149 EDCEATFRHCDLDNSGDLDVDEM 171
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 18/94 (19%)
Query: 125 TNEELIKF--TFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182
T E++ +F F ++D +N G I+ E+ ++R+ +S + E V DL + ++
Sbjct: 6 TEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAE-----VADL----MNEI 56
Query: 183 DYDKDGKISFQDF------QQSVTD-EPLLLEAF 209
D D + I F +F Q D E LLEAF
Sbjct: 57 DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAF 90
>pdb|3V0A|B Chain B, 2.7 Angstrom Crystal Structure Of BontAI IN COMPLEX WITH
NTNHA
pdb|3V0B|B Chain B, 3.9 Angstrom Crystal Structure Of BontAI IN COMPLEX WITH
NTNHA
Length = 1196
Score = 27.7 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 13 SFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGL 72
SF +E + L I L+N N +PI S + + GLP +++ E+ F+
Sbjct: 606 SFVEEFQNLGAI--SLINKKENLSMPIIESYEIPNDMLGLPLNDLNEKL-----FNIYSK 658
Query: 73 DRVVFRELLHNTFD 86
+ F+++ +N D
Sbjct: 659 NTAYFKKIYYNFLD 672
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPD---EGVRDLVELALRKMDYDKDGKI 190
F D N DG + R+E+ + R L+ D D + V+ L+ +D+D++G I
Sbjct: 46 FRQLDNNGDGQLDRKELIEGYR-KLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYI 104
Query: 191 SFQDFQQSVTDEPLLL 206
+ +F D+ LLL
Sbjct: 105 EYSEFVTVCMDKQLLL 120
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 15/114 (13%)
Query: 98 FCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157
F FD G I E + + +E IK D + G I EE Q++
Sbjct: 14 FDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAK 73
Query: 158 LISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQ-------QSVTDEPL 204
+ R+ + A R D D+ GKISF++ + +++TDE L
Sbjct: 74 MGERDS--------REEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEEL 119
>pdb|1GVF|A Chain A, Structure Of Tagatose-1,6-Bisphosphate Aldolase
pdb|1GVF|B Chain B, Structure Of Tagatose-1,6-Bisphosphate Aldolase
Length = 286
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 149 EMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISF 192
E+ +++ L+ H + PDE VR +EL + K++ + KI+F
Sbjct: 196 EIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAF 239
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
IK F I D + GFI EE+ QL + S + E + L D D DGK
Sbjct: 44 IKKVFGILDQDKSGFIEEEEL-QLFLKNFSSSARVLTSAE-----TKAFLAAGDTDGDGK 97
Query: 190 ISFQDFQ 196
I ++FQ
Sbjct: 98 IGVEEFQ 104
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGK 189
IK F I D + GFI EE+ QL + S + E + L D D DGK
Sbjct: 43 IKKVFGILDQDKSGFIEEEEL-QLFLKNFSSSARVLTSAE-----TKAFLAAGDTDGDGK 96
Query: 190 ISFQDFQ 196
I ++FQ
Sbjct: 97 IGVEEFQ 103
>pdb|2VSA|A Chain A, Structure And Mode Of Action Of A Mosquitocidal Holotoxin
pdb|2VSE|A Chain A, Structure And Mode Of Action Of A Mosquitocidal Holotoxin
pdb|2VSE|B Chain B, Structure And Mode Of Action Of A Mosquitocidal Holotoxin
Length = 841
Score = 27.7 bits (60), Expect = 5.8, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 125 TNEELIKFTFLIYDLNNDGFITR 147
TN++L + ++ Y+ N DGFI R
Sbjct: 773 TNDDLRSYWYVEYNFNKDGFIIR 795
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 29/138 (21%)
Query: 69 FQGLDRVVFRELLHNTFDLVTEEILME--RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 126
FQ ++ LL+ L ++E E IF D+ DG + E + G S +
Sbjct: 321 FQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKL---SG 377
Query: 127 EELIKF-----------TFLIYDLNNDGFITREEMFQLL--RNSLISHPQDEDPDEGVRD 173
EE+ F D + +G+I E + R SL+S +D
Sbjct: 378 EEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS-----------KD 426
Query: 174 LVELALRKMDYDKDGKIS 191
+E A +K D D +GKIS
Sbjct: 427 KLESAFQKFDQDGNGKIS 444
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 95 ERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEM 150
+ +F FD+ G I LDEW ++E + TF DL+N G + +EM
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 95 ERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEM 150
+ +F FD+ G I LDEW ++E + TF DL+N G + +EM
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 95 ERIFCAFDRLCDGVIHLDEW---VLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEM 150
+R+F FD+ DG + LDE+ L S + T E+++KF F D++ +G + +E
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYF--TQEDIVKF-FEEIDVDGNGELNADEF 59
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 27.3 bits (59), Expect = 7.6, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 153
+ +F FD+ DG I L+E + L E+ I+ D NNDG I +E +
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 66
Query: 154 LR 155
++
Sbjct: 67 MK 68
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 137 YDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQD 194
YD ++ G+I+ E+ L++ + H + P++ + + + + D +KDG++ D
Sbjct: 113 YDADSSGYISAAELKNFLKDLFLQHKKKIPPNK-LDEYTDAXXKIFDKNKDGRLDLND 169
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 13/90 (14%)
Query: 107 GVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDED 166
G I E++ + E+ + F +D + G+IT +E+ Q
Sbjct: 78 GTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEF--------- 128
Query: 167 PDEGVRDL-VELALRKMDYDKDGKISFQDF 195
GV D+ +E R +D D DG+I + +F
Sbjct: 129 ---GVEDVRIEELXRDVDQDNDGRIDYNEF 155
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 95 ERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEM 150
+ +F FD+ G I LDEW ++E + TF DL+N G + +EM
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEM 171
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 15/68 (22%)
Query: 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVR---DLVELALRKMDYDKDGKI 190
F YD +N G I + E+ Q L + G R ++ +RK D G+I
Sbjct: 80 FRTYDRDNSGMIDKNELKQALSGA------------GYRLSDQFHDILIRKFDRQGRGQI 127
Query: 191 SFQDFQQS 198
+F DF Q
Sbjct: 128 AFDDFIQG 135
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,614,580
Number of Sequences: 62578
Number of extensions: 276795
Number of successful extensions: 1489
Number of sequences better than 100.0: 219
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 1201
Number of HSP's gapped (non-prelim): 271
length of query: 229
length of database: 14,973,337
effective HSP length: 95
effective length of query: 134
effective length of database: 9,028,427
effective search space: 1209809218
effective search space used: 1209809218
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 50 (23.9 bits)