Query psy8447
Match_columns 229
No_of_seqs 149 out of 2148
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 19:05:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8447.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8447hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1s6c_A KV4 potassium channel-i 99.9 1E-24 3.5E-29 163.8 15.6 173 40-212 3-179 (183)
2 1s1e_A KV channel interacting 99.9 3.8E-24 1.3E-28 166.3 16.9 177 37-213 33-213 (224)
3 2l2e_A Calcium-binding protein 99.9 1.5E-23 5.1E-28 158.4 16.1 173 37-213 7-187 (190)
4 3dd4_A KV channel-interacting 99.9 8.3E-24 2.9E-28 164.8 14.9 174 40-213 49-226 (229)
5 1bjf_A Neurocalcin delta; calc 99.9 2.3E-23 8E-28 157.6 17.0 182 37-219 7-192 (193)
6 1g8i_A Frequenin, neuronal cal 99.9 2.2E-23 7.4E-28 157.4 15.0 176 38-213 8-187 (190)
7 2jul_A Calsenilin; EF-hand, ca 99.9 2.2E-23 7.5E-28 165.1 15.6 175 38-212 74-252 (256)
8 1fpw_A Yeast frequenin, calciu 99.9 1.2E-23 4.3E-28 158.7 13.6 178 35-212 5-186 (190)
9 2d8n_A Recoverin; structural g 99.9 2.6E-23 8.9E-28 159.2 15.1 178 35-215 13-199 (207)
10 2l4h_A Calcium and integrin-bi 99.9 1.9E-23 6.6E-28 161.2 13.8 169 38-211 31-212 (214)
11 2ehb_A Calcineurin B-like prot 99.9 5.6E-23 1.9E-27 157.4 15.3 176 35-213 14-195 (207)
12 2lmt_A Calmodulin-related prot 99.9 2.9E-23 9.8E-28 151.0 12.9 144 12-201 3-147 (148)
13 3sjs_A URE3-BP sequence specif 99.9 3.9E-23 1.3E-27 160.1 13.8 164 2-218 34-198 (220)
14 2zfd_A Calcineurin B-like prot 99.9 2.6E-22 9E-27 155.9 16.0 171 39-212 29-205 (226)
15 1dgu_A Calcium-saturated CIB; 99.9 1.3E-22 4.6E-27 152.3 12.7 135 72-211 45-181 (183)
16 3u0k_A Rcamp; fluorescent prot 99.9 2.2E-22 7.6E-27 166.0 14.4 120 72-201 319-439 (440)
17 3ox6_A Calcium-binding protein 99.9 1.4E-21 4.9E-26 141.8 16.0 145 10-200 2-152 (153)
18 1jba_A GCAP-2, protein (guanyl 99.9 3.9E-22 1.3E-26 152.4 13.5 172 44-216 11-191 (204)
19 3i5g_C Myosin catalytic light 99.9 1.9E-22 6.5E-27 148.5 10.7 145 12-203 2-153 (159)
20 2jnf_A Troponin C; stretch act 99.9 4.4E-22 1.5E-26 145.7 12.3 122 72-203 31-157 (158)
21 2r2i_A Guanylyl cyclase-activa 99.9 6.9E-22 2.4E-26 150.3 13.6 164 48-214 7-172 (198)
22 2lhi_A Calmodulin, serine/thre 99.9 8.8E-23 3E-27 152.8 8.3 142 51-203 4-149 (176)
23 2obh_A Centrin-2; DNA repair c 99.9 3.4E-22 1.2E-26 144.4 11.1 119 72-200 23-142 (143)
24 3qrx_A Centrin; calcium-bindin 99.9 1.1E-21 3.6E-26 145.2 13.9 147 49-205 19-169 (169)
25 1exr_A Calmodulin; high resolu 99.9 1.3E-21 4.5E-26 141.9 14.1 120 72-201 27-147 (148)
26 1dtl_A Cardiac troponin C; hel 99.9 7.9E-22 2.7E-26 144.7 12.3 148 9-202 8-160 (161)
27 2ggz_A Guanylyl cyclase-activa 99.9 8.9E-22 3E-26 151.4 12.4 162 49-213 13-175 (211)
28 3pm8_A PFCDPK2, calcium-depend 99.9 2.1E-22 7E-27 153.4 8.6 143 52-202 51-196 (197)
29 3fwb_A Cell division control p 99.9 4.4E-21 1.5E-25 140.6 15.4 140 52-201 17-160 (161)
30 2bec_A Calcineurin B homologou 99.9 2.1E-21 7.2E-26 148.1 14.0 161 38-208 9-190 (202)
31 1wdc_C Scallop myosin; calcium 99.9 9.1E-22 3.1E-26 143.8 10.6 147 11-204 1-153 (156)
32 3k21_A PFCDPK3, calcium-depend 99.9 2.8E-21 9.5E-26 146.4 13.2 143 51-200 45-190 (191)
33 4ds7_A Calmodulin, CAM; protei 99.9 4E-21 1.4E-25 138.6 13.1 143 11-200 3-146 (147)
34 2bl0_C Myosin regulatory light 99.9 2.7E-21 9.3E-26 139.0 11.1 118 72-200 23-141 (142)
35 2mys_C Myosin; muscle protein, 99.9 3.5E-20 1.2E-24 133.9 15.5 118 72-201 25-148 (149)
36 2f2o_A Calmodulin fused with c 99.8 7E-21 2.4E-25 142.2 11.7 122 72-203 28-150 (179)
37 2ovk_C Myosin catalytic light 99.8 3.5E-21 1.2E-25 141.2 9.6 145 12-203 2-153 (159)
38 2aao_A CDPK, calcium-dependent 99.8 2.1E-21 7.2E-26 143.2 8.3 120 72-203 44-163 (166)
39 3i5g_B Myosin regulatory light 99.8 6.1E-21 2.1E-25 139.5 9.9 117 72-203 33-150 (153)
40 3ll8_B Calcineurin subunit B t 99.8 1.2E-19 4.1E-24 132.1 16.3 122 72-203 23-146 (155)
41 1top_A Troponin C; contractIle 99.8 8.5E-21 2.9E-25 139.2 10.0 141 51-201 13-160 (162)
42 1qv0_A Obelin, OBL; photoprote 99.8 2.9E-20 9.8E-25 140.6 12.4 143 13-200 14-176 (195)
43 1y1x_A Leishmania major homolo 99.8 3.1E-20 1.1E-24 140.5 12.3 150 54-219 26-175 (191)
44 3j04_B Myosin regulatory light 99.8 5.5E-21 1.9E-25 137.5 7.5 137 53-203 2-142 (143)
45 1nya_A Calerythrin; EF-hand, m 99.8 7.7E-20 2.6E-24 135.9 13.0 120 72-202 24-165 (176)
46 1uhk_A Aequorin 2, aequorin; E 99.8 5.5E-20 1.9E-24 138.5 12.4 120 72-200 33-172 (191)
47 1m45_A MLC1P, myosin light cha 99.8 3E-21 1E-25 139.7 4.8 121 71-201 20-147 (148)
48 2ct9_A Calcium-binding protein 99.8 3.2E-20 1.1E-24 142.3 10.7 156 40-204 11-185 (208)
49 1alv_A Calpain, S-camld; calci 99.8 7.5E-20 2.6E-24 136.1 12.4 132 72-220 20-159 (173)
50 2znd_A Programmed cell death p 99.8 4.9E-20 1.7E-24 136.9 11.0 151 55-220 7-157 (172)
51 2mys_B Myosin; muscle protein, 99.8 3E-19 1E-23 131.7 15.1 137 53-203 20-161 (166)
52 3e3r_A Calcyphosin, calcyphosi 99.8 7.6E-20 2.6E-24 139.3 11.8 160 57-228 39-201 (204)
53 1s6i_A CDPK, calcium-dependent 99.8 2.9E-21 9.9E-26 145.9 3.9 121 71-203 26-146 (188)
54 3khe_A Calmodulin-like domain 99.8 1.5E-20 5.3E-25 141.7 7.7 138 53-202 35-186 (191)
55 2hpk_A Photoprotein berovin; s 99.8 1.2E-19 4E-24 139.0 12.6 138 52-201 30-190 (208)
56 2be4_A Hypothetical protein LO 99.8 5.4E-20 1.9E-24 146.0 10.9 190 12-204 49-271 (272)
57 2ovk_B RLC, myosin regulatory 99.8 5.6E-20 1.9E-24 133.9 9.9 117 72-203 33-150 (153)
58 1w7j_B Myosin light chain 1; m 99.8 3.8E-21 1.3E-25 139.7 3.4 119 72-201 27-150 (151)
59 2f33_A Calbindin; EF-hand, Ca2 99.8 3.2E-19 1.1E-23 140.9 14.7 142 57-203 105-262 (263)
60 2sas_A Sarcoplasmic calcium-bi 99.8 3.9E-19 1.3E-23 133.0 14.2 118 72-201 26-167 (185)
61 1ij5_A Plasmodial specific LAV 99.8 9.6E-20 3.3E-24 148.7 11.5 172 10-201 113-318 (323)
62 1wdc_B Scallop myosin; calcium 99.8 4E-19 1.4E-23 129.7 13.6 117 72-203 35-152 (156)
63 2ccm_A Calexcitin; EF hand, ca 99.8 4.5E-19 1.5E-23 133.7 13.6 117 72-200 30-170 (191)
64 2lvv_A Flagellar calcium-bindi 99.8 1E-19 3.4E-24 141.4 10.2 124 72-204 68-201 (226)
65 3dtp_E RLC, myosin regulatory 99.8 9.5E-20 3.3E-24 138.4 9.7 137 52-203 51-191 (196)
66 2znd_A Programmed cell death p 99.8 1.1E-18 3.8E-23 129.5 15.3 161 17-201 5-170 (172)
67 3mse_B Calcium-dependent prote 99.8 2.3E-19 7.8E-24 134.4 11.0 133 54-201 35-178 (180)
68 2bl0_B Myosin regulatory light 99.8 1.8E-19 6E-24 129.7 9.7 137 53-202 3-141 (145)
69 2i7a_A Calpain 13; calcium-dep 99.8 1.4E-19 4.8E-24 135.0 9.0 133 72-218 21-159 (174)
70 3cs1_A Flagellar calcium-bindi 99.8 1.6E-19 5.4E-24 139.6 9.6 122 72-202 65-196 (219)
71 3sg6_A Gcamp2, myosin light ch 99.8 6.9E-19 2.3E-23 148.0 14.1 141 51-201 305-449 (450)
72 1y1x_A Leishmania major homolo 99.8 4.2E-18 1.4E-22 128.7 17.1 159 18-200 26-188 (191)
73 1juo_A Sorcin; calcium-binding 99.8 9.2E-20 3.2E-24 138.6 7.3 142 61-220 38-184 (198)
74 1q80_A SCP, sarcoplasmic calci 99.8 1E-18 3.5E-23 129.6 12.7 117 72-201 23-156 (174)
75 1gjy_A Sorcin, CP-22, V19; cal 99.8 1.9E-18 6.5E-23 127.7 12.7 133 71-220 17-153 (167)
76 1jfj_A Ehcabp, calcium-binding 99.8 3.7E-19 1.2E-23 126.1 8.5 129 57-199 2-133 (134)
77 1k94_A Grancalcin; penta-EF-ha 99.8 3.2E-18 1.1E-22 126.2 13.8 131 72-220 16-151 (165)
78 3a8r_A Putative uncharacterize 99.8 2.4E-18 8.3E-23 128.9 12.4 142 57-204 27-173 (179)
79 3akb_A Putative calcium bindin 99.8 4.2E-18 1.4E-22 125.1 13.1 118 72-200 21-159 (166)
80 1ggw_A Protein (CDC4P); light 99.8 1.6E-18 5.5E-23 124.2 10.5 132 55-201 5-139 (140)
81 1eg3_A Dystrophin; EF-hand lik 99.8 2.3E-18 8E-23 134.5 11.5 163 44-209 68-250 (261)
82 3q5i_A Protein kinase; CDPK, m 99.8 1.5E-18 5E-23 149.9 11.1 140 52-202 349-498 (504)
83 3lij_A Calcium/calmodulin depe 99.8 1.5E-18 5.1E-23 149.5 10.7 139 52-201 340-488 (494)
84 3mwu_A Calmodulin-domain prote 99.8 1.8E-18 6E-23 148.7 10.9 140 53-201 326-481 (486)
85 3nyv_A Calmodulin-domain prote 99.8 6.5E-18 2.2E-22 145.0 13.5 139 53-202 330-481 (484)
86 2f33_A Calbindin; EF-hand, Ca2 99.8 5.1E-18 1.7E-22 134.0 11.6 166 54-220 15-208 (263)
87 2qac_A Myosin A tail domain in 99.7 1.1E-17 3.9E-22 120.6 10.6 113 72-200 32-145 (146)
88 3bow_A Calpain-2 catalytic sub 99.7 1.5E-17 5.2E-22 148.6 13.4 132 72-220 548-687 (714)
89 2be4_A Hypothetical protein LO 99.7 2.1E-17 7.3E-22 131.0 11.5 187 11-200 3-223 (272)
90 2i7a_A Calpain 13; calcium-dep 99.7 9.6E-17 3.3E-21 119.6 13.2 142 35-200 18-172 (174)
91 1ij5_A Plasmodial specific LAV 99.7 1.4E-17 4.9E-22 135.8 7.1 153 50-220 114-270 (323)
92 2hps_A Coelenterazine-binding 99.7 2E-18 6.7E-23 129.6 1.6 118 72-201 31-166 (186)
93 3fs7_A Parvalbumin, thymic; ca 99.7 6.4E-17 2.2E-21 111.0 7.9 104 86-200 5-108 (109)
94 5pal_A Parvalbumin; calcium-bi 99.7 1.5E-16 5E-21 109.2 9.2 103 88-201 6-108 (109)
95 2d8n_A Recoverin; structural g 99.7 6.7E-16 2.3E-20 117.8 13.7 140 70-221 14-175 (207)
96 1bu3_A Calcium-binding protein 99.7 2.5E-16 8.6E-21 108.0 9.1 105 85-200 4-108 (109)
97 1bjf_A Neurocalcin delta; calc 99.7 9.6E-16 3.3E-20 115.5 12.7 158 11-190 20-193 (193)
98 3sjs_A URE3-BP sequence specif 99.7 2.5E-15 8.4E-20 116.1 14.6 128 51-201 83-217 (220)
99 2bec_A Calcineurin B homologou 99.7 1.1E-15 3.8E-20 116.2 12.5 144 10-157 20-184 (202)
100 2pvb_A Protein (parvalbumin); 99.7 2.4E-16 8.1E-21 108.0 7.6 102 88-200 6-107 (108)
101 1rwy_A Parvalbumin alpha; EF-h 99.7 2.4E-16 8.3E-21 108.1 7.5 103 88-201 6-108 (109)
102 3h4s_E KCBP interacting Ca2+-b 99.7 6.1E-17 2.1E-21 115.7 4.5 112 94-213 5-118 (135)
103 1pva_A Parvalbumin; calcium bi 99.6 3.6E-16 1.2E-20 107.4 6.9 103 88-201 7-109 (110)
104 1rro_A RAT oncomodulin; calciu 99.6 4.6E-16 1.6E-20 106.6 6.8 103 87-200 5-107 (108)
105 1s6c_A KV4 potassium channel-i 99.6 9.8E-16 3.4E-20 114.5 9.1 136 73-220 2-157 (183)
106 3a4u_B Multiple coagulation fa 99.6 2.4E-16 8.3E-21 113.6 5.6 106 94-199 29-142 (143)
107 1alv_A Calpain, S-camld; calci 99.6 7.1E-15 2.4E-19 109.0 12.6 157 17-200 2-168 (173)
108 2l2e_A Calcium-binding protein 99.6 1.5E-14 5.1E-19 108.7 14.5 143 11-156 6-175 (190)
109 2ggz_A Guanylyl cyclase-activa 99.6 1.1E-15 3.7E-20 117.2 8.1 167 9-203 12-188 (211)
110 3dd4_A KV channel-interacting 99.6 5.5E-15 1.9E-19 114.8 12.0 142 10-156 58-214 (229)
111 1dgu_A Calcium-saturated CIB; 99.6 1.3E-14 4.6E-19 108.4 13.6 145 9-155 10-170 (183)
112 2l4h_A Calcium and integrin-bi 99.6 2.5E-15 8.7E-20 115.5 9.8 147 8-156 40-202 (214)
113 2zfd_A Calcineurin B-like prot 99.6 2.6E-14 9.1E-19 110.6 15.3 144 10-156 39-194 (226)
114 1fpw_A Yeast frequenin, calciu 99.6 2.3E-14 7.8E-19 107.6 14.5 141 11-156 20-175 (190)
115 2bl0_B Myosin regulatory light 99.6 1.4E-14 4.9E-19 103.8 12.8 136 13-156 2-140 (145)
116 1k94_A Grancalcin; penta-EF-ha 99.6 2.7E-14 9.3E-19 104.9 14.0 151 23-200 3-160 (165)
117 2sas_A Sarcoplasmic calcium-bi 99.6 6.3E-15 2.2E-19 109.9 10.6 128 93-220 9-156 (185)
118 1gjy_A Sorcin, CP-22, V19; cal 99.6 2.7E-14 9.3E-19 105.2 13.8 150 23-198 5-163 (167)
119 1g8i_A Frequenin, neuronal cal 99.6 1.8E-14 6.1E-19 108.2 12.8 142 10-156 19-175 (190)
120 1jba_A GCAP-2, protein (guanyl 99.6 3.6E-14 1.2E-18 107.9 14.7 141 12-155 15-175 (204)
121 1s1e_A KV channel interacting 99.6 4.7E-14 1.6E-18 109.1 15.5 142 10-156 45-201 (224)
122 2ehb_A Calcineurin B-like prot 99.6 3.9E-14 1.3E-18 107.9 14.2 144 10-156 28-183 (207)
123 2kyc_A Parvalbumin-3, parvalbu 99.6 3E-16 1E-20 107.5 1.8 100 87-200 5-107 (108)
124 2r2i_A Guanylyl cyclase-activa 99.6 2.6E-14 9E-19 108.2 12.5 140 10-155 8-158 (198)
125 2ct9_A Calcium-binding protein 99.6 2.7E-14 9.3E-19 109.0 12.6 143 10-156 20-182 (208)
126 1qxp_A MU-like calpain; M-calp 99.6 8.5E-16 2.9E-20 140.9 4.9 146 57-219 533-688 (900)
127 1jfj_A Ehcabp, calcium-binding 99.6 6E-15 2.1E-19 104.1 8.2 122 94-221 2-125 (134)
128 1sjj_A Actinin; 3-helix bundle 99.6 2.6E-15 8.8E-20 137.3 6.9 137 50-204 717-862 (863)
129 1juo_A Sorcin; calcium-binding 99.6 7.3E-14 2.5E-18 105.8 13.7 160 13-199 27-195 (198)
130 3qrx_A Centrin; calcium-bindin 99.6 5.2E-14 1.8E-18 103.6 12.3 120 94-221 30-155 (169)
131 2ccm_A Calexcitin; EF hand, ca 99.6 3.9E-14 1.3E-18 106.4 11.5 129 94-222 14-162 (191)
132 2obh_A Centrin-2; DNA repair c 99.6 2.9E-14 9.9E-19 102.4 10.2 121 94-222 8-134 (143)
133 1qxp_A MU-like calpain; M-calp 99.5 3.6E-14 1.2E-18 130.1 12.8 190 12-222 573-823 (900)
134 3fwb_A Cell division control p 99.5 7.1E-14 2.4E-18 101.9 11.6 119 94-220 25-149 (161)
135 1exr_A Calmodulin; high resolu 99.5 6.5E-14 2.2E-18 101.0 11.2 120 94-221 12-137 (148)
136 2bl0_C Myosin regulatory light 99.5 9.1E-14 3.1E-18 99.3 11.4 101 94-202 8-108 (142)
137 4ds7_A Calmodulin, CAM; protei 99.5 8.8E-14 3E-18 99.7 11.4 101 94-202 13-113 (147)
138 3khe_A Calmodulin-like domain 99.5 1.6E-14 5.6E-19 108.4 7.7 120 92-220 40-174 (191)
139 2f2o_A Calmodulin fused with c 99.5 1.2E-13 3.9E-18 102.7 11.8 120 93-220 12-137 (179)
140 2jul_A Calsenilin; EF-hand, ca 99.5 1.7E-13 5.9E-18 108.0 13.3 142 10-156 85-241 (256)
141 2jnf_A Troponin C; stretch act 99.5 8.6E-14 2.9E-18 101.2 10.1 122 94-219 15-143 (158)
142 3ox6_A Calcium-binding protein 99.5 6.2E-14 2.1E-18 101.2 8.4 124 94-221 13-143 (153)
143 5pal_A Parvalbumin; calcium-bi 99.5 4.4E-13 1.5E-17 91.7 12.1 101 51-156 5-108 (109)
144 1djx_A PLC-D1, phosphoinositid 99.5 1.2E-14 4.2E-19 127.6 5.2 134 57-202 13-150 (624)
145 3pm8_A PFCDPK2, calcium-depend 99.5 1.8E-14 6.3E-19 109.2 5.5 122 92-222 57-186 (197)
146 1dtl_A Cardiac troponin C; hel 99.5 9.3E-14 3.2E-18 101.3 9.1 122 94-220 20-148 (161)
147 3e3r_A Calcyphosin, calcyphosi 99.5 6.3E-14 2.2E-18 106.3 8.5 99 94-201 39-137 (204)
148 3k21_A PFCDPK3, calcium-depend 99.5 1.9E-13 6.6E-18 103.0 10.6 122 91-223 51-183 (191)
149 1s6i_A CDPK, calcium-dependent 99.5 5.4E-14 1.9E-18 105.8 7.1 117 94-219 12-132 (188)
150 1top_A Troponin C; contractIle 99.5 1.7E-13 5.9E-18 99.9 9.6 123 93-220 21-149 (162)
151 1nya_A Calerythrin; EF-hand, m 99.5 1.5E-13 5.2E-18 101.6 9.3 126 94-220 9-153 (176)
152 3mse_B Calcium-dependent prote 99.5 7.2E-14 2.5E-18 104.3 7.5 114 92-217 39-156 (180)
153 3fs7_A Parvalbumin, thymic; ca 99.5 4.6E-13 1.6E-17 91.5 10.9 101 50-155 5-108 (109)
154 1m45_A MLC1P, myosin light cha 99.5 4.6E-14 1.6E-18 101.6 6.0 124 94-222 6-138 (148)
155 2hpk_A Photoprotein berovin; s 99.5 2.9E-13 1E-17 103.2 10.5 121 94-220 38-179 (208)
156 3a8r_A Putative uncharacterize 99.5 6.3E-13 2.1E-17 99.3 11.6 135 16-156 25-170 (179)
157 1uhk_A Aequorin 2, aequorin; E 99.5 7.2E-13 2.4E-17 99.3 11.9 127 94-220 18-162 (191)
158 1qv0_A Obelin, OBL; photoprote 99.5 7.6E-13 2.6E-17 99.5 11.6 128 94-221 22-167 (195)
159 3u0k_A Rcamp; fluorescent prot 99.5 2.8E-13 9.5E-18 112.0 9.9 120 94-221 304-429 (440)
160 1bu3_A Calcium-binding protein 99.4 1.6E-12 5.4E-17 88.8 11.7 100 51-155 6-108 (109)
161 2lmt_A Calmodulin-related prot 99.4 9.1E-13 3.1E-17 95.1 10.9 104 52-155 43-146 (148)
162 2mys_C Myosin; muscle protein, 99.4 1.3E-12 4.6E-17 93.7 11.7 120 94-221 10-138 (149)
163 2lv7_A Calcium-binding protein 99.4 4.1E-13 1.4E-17 90.5 8.4 65 127-200 35-99 (100)
164 1ggw_A Protein (CDC4P); light 99.4 1.5E-13 5E-18 98.0 6.4 131 18-155 4-138 (140)
165 3bow_A Calpain-2 catalytic sub 99.4 9.1E-13 3.1E-17 117.9 12.8 163 12-200 524-697 (714)
166 1rwy_A Parvalbumin alpha; EF-h 99.4 3E-12 1E-16 87.4 12.1 100 51-155 5-107 (109)
167 2aao_A CDPK, calcium-dependent 99.4 4.6E-13 1.6E-17 98.1 8.5 100 94-202 29-128 (166)
168 2pvb_A Protein (parvalbumin); 99.4 2.3E-12 7.8E-17 87.9 11.3 99 52-155 6-107 (108)
169 3akb_A Putative calcium bindin 99.4 5.4E-13 1.8E-17 97.5 8.6 125 94-220 6-149 (166)
170 3q5i_A Protein kinase; CDPK, m 99.4 4.4E-13 1.5E-17 115.6 9.1 122 92-222 355-488 (504)
171 3lij_A Calcium/calmodulin depe 99.4 4.6E-13 1.6E-17 115.2 8.7 123 92-223 346-480 (494)
172 1w7j_B Myosin light chain 1; m 99.4 2.5E-13 8.6E-18 98.0 5.4 122 94-222 12-141 (151)
173 1pva_A Parvalbumin; calcium bi 99.4 4.8E-12 1.7E-16 86.5 11.5 100 51-155 6-108 (110)
174 1rro_A RAT oncomodulin; calciu 99.4 2.8E-12 9.4E-17 87.5 10.1 100 51-155 5-107 (108)
175 3h4s_E KCBP interacting Ca2+-b 99.4 9.5E-13 3.3E-17 93.7 7.9 101 58-158 6-107 (135)
176 2lhi_A Calmodulin, serine/thre 99.4 3E-12 1E-16 95.3 10.4 143 11-156 3-147 (176)
177 1q80_A SCP, sarcoplasmic calci 99.4 3.8E-12 1.3E-16 93.8 10.9 121 94-220 8-145 (174)
178 1s6j_A CDPK, calcium-dependent 99.4 3.5E-14 1.2E-18 93.2 -0.3 86 104-200 1-86 (87)
179 3nyv_A Calmodulin-domain prote 99.4 2.8E-12 9.4E-17 110.0 10.8 121 93-222 336-471 (484)
180 3ll8_B Calcineurin subunit B t 99.3 1.3E-11 4.5E-16 89.1 11.8 141 14-158 1-146 (155)
181 2mys_B Myosin; muscle protein, 99.3 1.8E-11 6.2E-16 89.7 12.5 141 10-156 16-159 (166)
182 1wdc_C Scallop myosin; calcium 99.3 1.2E-11 4.1E-16 89.6 10.8 104 52-156 44-150 (156)
183 3sg6_A Gcamp2, myosin light ch 99.3 5E-12 1.7E-16 106.4 9.7 123 92-222 312-440 (450)
184 1k9u_A Polcalcin PHL P 7; poll 99.3 2.7E-12 9.2E-17 82.2 6.2 72 128-209 3-74 (78)
185 2ovk_C Myosin catalytic light 99.3 1.4E-11 4.7E-16 89.7 10.2 104 52-156 44-151 (159)
186 2zkm_X 1-phosphatidylinositol- 99.3 2.9E-12 9.9E-17 115.3 7.8 140 55-203 146-299 (799)
187 3i5g_C Myosin catalytic light 99.3 2.7E-11 9.2E-16 88.6 11.3 112 43-155 33-150 (159)
188 3nso_A Protein S100-A3; EF-han 99.3 7.2E-12 2.5E-16 84.3 7.2 73 128-204 10-84 (101)
189 2jjz_A Ionized calcium-binding 99.3 1.1E-12 3.8E-17 95.1 3.3 109 92-219 24-133 (150)
190 2ovk_B RLC, myosin regulatory 99.3 5.6E-12 1.9E-16 91.1 7.1 114 94-220 18-137 (153)
191 3mwu_A Calmodulin-domain prote 99.3 3.2E-12 1.1E-16 109.7 6.4 122 92-222 331-472 (486)
192 3j04_B Myosin regulatory light 99.3 7.6E-12 2.6E-16 89.3 7.2 137 13-155 1-139 (143)
193 3zwh_A Protein S100-A4; Ca-bin 99.3 2E-11 6.8E-16 82.7 8.8 75 128-207 13-90 (104)
194 2opo_A Polcalcin CHE A 3; calc 99.3 5.8E-12 2E-16 82.2 5.7 71 127-207 10-80 (86)
195 2lvv_A Flagellar calcium-bindi 99.3 2E-12 6.9E-17 100.0 3.5 118 94-220 53-187 (226)
196 2kz2_A Calmodulin, CAM; TR2C, 99.3 2.1E-11 7.3E-16 81.1 7.8 70 123-201 24-93 (94)
197 3dtp_E RLC, myosin regulatory 99.3 2.2E-11 7.5E-16 92.0 8.8 140 9-155 47-188 (196)
198 1qx2_A Vitamin D-dependent cal 99.2 4.2E-11 1.4E-15 76.0 8.4 67 126-201 3-73 (76)
199 1tiz_A Calmodulin-related prot 99.2 6.5E-12 2.2E-16 77.8 4.4 63 130-201 3-65 (67)
200 4eto_A Protein S100-A4; calciu 99.2 4.1E-11 1.4E-15 79.5 8.2 71 128-203 10-83 (93)
201 3nxa_A Protein S100-A16; S100 99.2 7.8E-11 2.7E-15 79.2 9.5 71 128-202 11-84 (100)
202 3n22_A Protein S100-A2; EF-han 99.2 2.7E-11 9.4E-16 81.1 7.1 72 128-203 11-84 (98)
203 1wdc_B Scallop myosin; calcium 99.2 1.4E-10 4.9E-15 83.9 11.2 142 8-156 7-150 (156)
204 3li6_A Calcium-binding protein 99.2 3.4E-11 1.2E-15 74.3 6.8 64 130-202 2-65 (66)
205 2lnk_A Protein S100-A4; EF-han 99.2 5.9E-11 2E-15 81.5 8.0 73 127-203 21-95 (113)
206 2kyc_A Parvalbumin-3, parvalbu 99.2 4.4E-12 1.5E-16 86.4 1.8 100 51-155 5-107 (108)
207 2joj_A Centrin protein; N-term 99.2 2.2E-11 7.4E-16 77.6 4.9 64 128-200 7-70 (77)
208 1tiz_A Calmodulin-related prot 99.2 8.5E-11 2.9E-15 72.6 7.5 63 94-156 3-65 (67)
209 1wlz_A DJBP, CAP-binding prote 99.2 3.4E-11 1.2E-15 81.6 6.0 85 108-202 5-89 (105)
210 2qac_A Myosin A tail domain in 99.2 2.2E-10 7.6E-15 81.9 10.5 133 15-155 10-145 (146)
211 1yx7_A Calsensin, LAN3-6 antig 99.2 5.4E-11 1.8E-15 77.0 6.5 69 126-199 5-75 (83)
212 2b1u_A Calmodulin-like protein 99.2 8.6E-12 2.9E-16 78.2 2.5 68 125-201 3-70 (71)
213 2lv7_A Calcium-binding protein 99.2 4.9E-11 1.7E-15 80.3 6.2 61 94-154 38-98 (100)
214 1tuz_A Diacylglycerol kinase a 99.2 4.7E-12 1.6E-16 86.8 1.1 95 37-131 7-116 (118)
215 2kld_A Polycystin-2; PC2, PKD2 99.2 5.2E-13 1.8E-17 93.5 -3.9 100 83-202 4-109 (123)
216 3cs1_A Flagellar calcium-bindi 99.2 5.4E-11 1.8E-15 91.4 7.0 118 94-220 50-184 (219)
217 3i5g_B Myosin regulatory light 99.2 5.2E-11 1.8E-15 86.5 6.4 138 11-155 8-147 (153)
218 1avs_A Troponin C; muscle cont 99.2 5.5E-11 1.9E-15 78.3 6.0 65 127-200 19-83 (90)
219 2kn2_A Calmodulin; S MAPK phos 99.1 6E-11 2E-15 78.3 5.9 64 128-200 9-72 (92)
220 2kz2_A Calmodulin, CAM; TR2C, 99.1 2.4E-10 8.1E-15 76.0 8.8 67 89-155 26-92 (94)
221 2ktg_A Calmodulin, putative; e 99.1 4E-11 1.4E-15 77.9 5.0 64 128-200 14-77 (85)
222 2y5i_A S100Z, S100 calcium bin 99.1 1.7E-10 5.7E-15 77.5 8.0 71 128-202 10-82 (99)
223 3li6_A Calcium-binding protein 99.1 4.8E-11 1.7E-15 73.6 4.8 61 95-155 3-63 (66)
224 1snl_A Nucleobindin 1, calnuc; 99.1 1.6E-10 5.3E-15 78.2 7.7 75 129-203 21-102 (103)
225 1c7v_A CAVP, calcium vector pr 99.1 1.2E-11 3.9E-16 79.8 1.9 70 125-203 6-75 (81)
226 1j55_A S-100P protein; metal b 99.1 1.8E-10 6E-15 76.8 7.6 71 128-202 9-81 (95)
227 3rm1_A Protein S100-B; alpha-h 99.1 3.2E-10 1.1E-14 75.0 8.6 70 128-202 9-81 (92)
228 4drw_A Protein S100-A10/annexi 99.1 3.1E-11 1.1E-15 83.8 3.7 80 128-212 15-95 (121)
229 2h2k_A Protein S100-A13; calci 99.1 1.9E-10 6.6E-15 78.1 7.6 67 128-202 22-91 (106)
230 4drw_A Protein S100-A10/annexi 99.1 8.8E-11 3E-15 81.5 5.5 64 57-121 14-84 (121)
231 2kn2_A Calmodulin; S MAPK phos 99.1 1.4E-09 4.9E-14 71.6 11.2 68 91-158 8-75 (92)
232 2joj_A Centrin protein; N-term 99.1 5.4E-10 1.9E-14 71.0 8.9 65 93-157 8-72 (77)
233 3ohm_B 1-phosphatidylinositol- 99.1 3.6E-10 1.2E-14 102.1 10.8 140 55-203 150-303 (885)
234 1cb1_A Calbindin D9K; calcium- 99.1 1.6E-10 5.3E-15 73.7 6.2 67 126-201 5-75 (78)
235 1fi6_A EH domain protein REPS1 99.1 1.3E-10 4.5E-15 76.9 6.0 65 127-202 8-72 (92)
236 1xk4_A Calgranulin A; S100 fam 99.1 1.9E-10 6.5E-15 76.3 6.7 66 128-202 10-78 (93)
237 2kax_A Protein S100-A5; EF-han 99.1 3E-10 1E-14 75.2 7.5 67 128-201 10-78 (92)
238 3a4u_B Multiple coagulation fa 99.1 9.6E-11 3.3E-15 84.1 5.4 84 71-154 43-142 (143)
239 2pmy_A RAS and EF-hand domain- 99.1 1.2E-10 4.2E-15 76.8 5.4 63 128-201 27-89 (91)
240 2wcb_A Protein S100-A12; calci 99.1 1E-10 3.5E-15 77.9 5.0 71 128-202 12-84 (95)
241 2jjz_A Ionized calcium-binding 99.1 2.9E-10 1E-14 82.2 7.8 82 94-189 52-133 (150)
242 1iq3_A Ralbp1-interacting prot 99.1 1.4E-10 4.8E-15 79.4 5.3 67 125-202 19-85 (110)
243 1c07_A Protein (epidermal grow 99.1 1.3E-10 4.3E-15 77.5 4.9 64 127-201 9-72 (95)
244 1wy9_A Allograft inflammatory 99.1 1.3E-10 4.4E-15 83.8 5.3 83 128-219 48-131 (147)
245 1k9u_A Polcalcin PHL P 7; poll 99.1 6.9E-10 2.4E-14 70.8 8.1 63 94-157 5-67 (78)
246 1qjt_A EH1, epidermal growth f 99.1 1.1E-10 3.6E-15 78.5 4.4 64 127-201 10-73 (99)
247 1psr_A Psoriasin, S100A7; EF-h 99.1 4E-10 1.4E-14 75.8 7.0 74 128-211 10-91 (100)
248 2d58_A Allograft inflammatory 99.1 1.5E-10 5.2E-15 78.7 4.9 67 128-203 32-98 (107)
249 2ktg_A Calmodulin, putative; e 99.1 1.2E-09 4E-14 70.8 9.0 66 93-158 15-80 (85)
250 2hps_A Coelenterazine-binding 99.1 3E-10 1E-14 84.5 6.8 147 9-159 4-169 (186)
251 2opo_A Polcalcin CHE A 3; calc 99.1 1.1E-09 3.9E-14 71.1 8.8 65 92-157 11-75 (86)
252 1djx_A PLC-D1, phosphoinositid 99.0 2.8E-11 9.7E-16 106.3 1.2 109 94-215 13-129 (624)
253 1j7q_A CAVP, calcium vector pr 99.0 8.5E-10 2.9E-14 71.8 8.0 69 126-201 12-80 (86)
254 1k2h_A S100A1, S-100 protein, 99.0 2.1E-10 7.1E-15 75.8 5.0 67 127-202 8-81 (93)
255 1avs_A Troponin C; muscle cont 99.0 1.6E-09 5.4E-14 71.1 9.2 65 93-157 21-85 (90)
256 2kgr_A Intersectin-1; structur 99.0 2.8E-10 9.5E-15 78.1 5.3 65 127-202 13-77 (111)
257 1qx2_A Vitamin D-dependent cal 99.0 7.1E-10 2.4E-14 70.2 6.6 65 93-157 6-74 (76)
258 1k8u_A S100A6, calcyclin, CACY 99.0 3.2E-10 1.1E-14 74.4 4.8 66 128-202 10-80 (90)
259 1wy9_A Allograft inflammatory 99.0 2.3E-10 8E-15 82.4 4.3 83 94-190 50-132 (147)
260 2b1u_A Calmodulin-like protein 99.0 4.1E-10 1.4E-14 70.3 4.9 64 92-155 6-69 (71)
261 2pmy_A RAS and EF-hand domain- 99.0 1.8E-09 6.3E-14 71.1 8.2 64 92-157 27-90 (91)
262 1sjj_A Actinin; 3-helix bundle 99.0 3.2E-10 1.1E-14 103.7 5.9 112 92-213 725-836 (863)
263 1a4p_A S100A10; S100 family, E 99.0 1.2E-09 4E-14 72.9 7.0 71 128-203 9-79 (96)
264 1wlz_A DJBP, CAP-binding prote 99.0 2E-09 7E-14 72.7 8.2 83 72-156 6-88 (105)
265 1c7v_A CAVP, calcium vector pr 99.0 6.2E-10 2.1E-14 71.5 5.3 65 91-156 8-73 (81)
266 1xk4_C Calgranulin B; S100 fam 99.0 2.4E-09 8.4E-14 73.5 8.3 72 128-203 12-86 (113)
267 1s6j_A CDPK, calcium-dependent 99.0 3.2E-10 1.1E-14 73.9 3.5 60 94-153 25-84 (87)
268 1yx7_A Calsensin, LAN3-6 antig 99.0 1.1E-09 3.9E-14 70.6 5.9 65 94-158 9-79 (83)
269 1qjt_A EH1, epidermal growth f 99.0 2.4E-09 8.4E-14 71.7 7.7 63 94-158 13-75 (99)
270 1eh2_A EPS15; calcium binding, 98.9 1.1E-09 3.6E-14 74.4 5.6 64 128-203 15-78 (106)
271 3nso_A Protein S100-A3; EF-han 98.9 2.9E-09 1E-13 71.5 7.6 64 94-157 12-82 (101)
272 2jq6_A EH domain-containing pr 98.9 1.6E-09 5.3E-14 76.9 6.3 65 126-202 49-113 (139)
273 1c07_A Protein (epidermal grow 98.9 3.3E-09 1.1E-13 70.5 7.4 65 92-158 10-74 (95)
274 3n22_A Protein S100-A2; EF-han 98.9 6E-09 2E-13 69.6 8.7 64 94-157 13-83 (98)
275 1xk4_C Calgranulin B; S100 fam 98.9 4.7E-09 1.6E-13 72.1 8.4 81 94-189 14-102 (113)
276 1j7q_A CAVP, calcium vector pr 98.9 5.9E-09 2E-13 67.7 8.4 65 92-157 14-81 (86)
277 1k2h_A S100A1, S-100 protein, 98.9 4.8E-09 1.7E-13 69.1 8.0 66 93-158 10-82 (93)
278 1qls_A S100C protein, calgizza 98.9 2.7E-09 9.3E-14 71.3 6.5 70 128-202 13-85 (99)
279 2kgr_A Intersectin-1; structur 98.9 5.6E-09 1.9E-13 71.5 8.0 63 93-157 15-77 (111)
280 1fi6_A EH domain protein REPS1 98.9 4.8E-09 1.7E-13 69.3 7.4 62 94-157 11-72 (92)
281 3qr0_A Phospholipase C-beta (P 98.9 2.7E-09 9.2E-14 95.9 8.0 129 64-203 164-310 (816)
282 3rm1_A Protein S100-B; alpha-h 98.9 9.3E-09 3.2E-13 67.9 8.6 63 94-157 11-81 (92)
283 2lnk_A Protein S100-A4; EF-han 98.9 8E-09 2.7E-13 70.7 8.0 65 93-157 23-94 (113)
284 2d58_A Allograft inflammatory 98.9 6.3E-09 2.1E-13 70.6 7.3 63 94-156 34-96 (107)
285 4eto_A Protein S100-A4; calciu 98.9 1.3E-08 4.5E-13 67.3 8.3 64 94-157 12-82 (93)
286 3zwh_A Protein S100-A4; Ca-bin 98.9 1.4E-08 4.9E-13 68.5 8.6 64 94-157 15-85 (104)
287 1h8b_A ACT-EF34, alpha-actinin 98.9 8E-09 2.7E-13 65.2 6.8 61 125-202 7-72 (75)
288 2y5i_A S100Z, S100 calcium bin 98.9 1.5E-08 5E-13 67.9 8.5 64 94-157 12-82 (99)
289 2wcb_A Protein S100-A12; calci 98.8 1E-08 3.5E-13 68.1 7.2 64 94-157 14-84 (95)
290 1k8u_A S100A6, calcyclin, CACY 98.8 9.4E-09 3.2E-13 67.2 6.9 64 94-157 12-80 (90)
291 1cb1_A Calbindin D9K; calcium- 98.8 4.4E-09 1.5E-13 66.8 4.8 64 94-157 9-76 (78)
292 1j55_A S-100P protein; metal b 98.8 1.4E-08 5E-13 67.4 7.3 64 94-157 11-81 (95)
293 2kax_A Protein S100-A5; EF-han 98.8 1.3E-08 4.4E-13 67.2 6.6 64 94-157 12-79 (92)
294 1xk4_A Calgranulin A; S100 fam 98.8 8.6E-09 2.9E-13 68.1 5.6 64 94-157 12-78 (93)
295 1iq3_A Ralbp1-interacting prot 98.8 6E-09 2E-13 71.2 4.8 63 93-157 23-85 (110)
296 3nxa_A Protein S100-A16; S100 98.8 5.1E-08 1.7E-12 65.3 8.8 65 94-158 13-85 (100)
297 1snl_A Nucleobindin 1, calnuc; 98.7 3.1E-08 1.1E-12 66.7 7.1 62 94-155 22-99 (103)
298 1eg3_A Dystrophin; EF-hand lik 98.7 9.4E-08 3.2E-12 74.6 10.7 95 57-155 134-241 (261)
299 1eh2_A EPS15; calcium binding, 98.7 3.7E-08 1.3E-12 66.7 7.3 61 94-157 17-77 (106)
300 2jq6_A EH domain-containing pr 98.7 5.3E-08 1.8E-12 69.0 8.2 63 92-157 51-113 (139)
301 1qls_A S100C protein, calgizza 98.7 4.1E-08 1.4E-12 65.4 7.2 64 94-157 15-85 (99)
302 2h2k_A Protein S100-A13; calci 98.7 2.8E-08 9.4E-13 67.3 6.4 64 94-157 24-91 (106)
303 2kld_A Polycystin-2; PC2, PKD2 98.7 9E-10 3.1E-14 76.9 -1.4 96 52-157 9-109 (123)
304 2zkm_X 1-phosphatidylinositol- 98.7 3.3E-08 1.1E-12 89.1 7.7 130 18-156 145-297 (799)
305 1sra_A Sparc; extracellular ma 98.7 2.9E-09 9.9E-14 75.8 0.7 66 128-204 77-143 (151)
306 3fia_A Intersectin-1; EH 1 dom 98.6 5.4E-08 1.8E-12 67.0 5.7 64 128-203 33-96 (121)
307 1a4p_A S100A10; S100 family, E 98.6 8.2E-08 2.8E-12 63.8 6.4 63 94-157 11-78 (96)
308 1psr_A Psoriasin, S100A7; EF-h 98.6 4.7E-08 1.6E-12 65.5 4.2 63 94-157 12-81 (100)
309 3ohm_B 1-phosphatidylinositol- 98.6 3.1E-07 1.1E-11 83.2 10.6 131 19-156 150-301 (885)
310 3fia_A Intersectin-1; EH 1 dom 98.5 8.5E-07 2.9E-11 61.0 8.1 61 94-157 35-95 (121)
311 3qr0_A Phospholipase C-beta (P 98.2 1.2E-06 4.3E-11 78.8 6.3 130 22-156 156-308 (816)
312 1sra_A Sparc; extracellular ma 98.2 4.6E-07 1.6E-11 64.5 1.8 60 94-155 79-139 (151)
313 1h8b_A ACT-EF34, alpha-actinin 98.2 7.9E-06 2.7E-10 51.4 7.0 57 91-155 9-70 (75)
314 1nub_A Basement membrane prote 98.1 4.7E-07 1.6E-11 69.6 1.0 65 128-203 155-220 (229)
315 1tuz_A Diacylglycerol kinase a 97.9 0.0001 3.5E-09 50.3 9.5 87 72-161 8-110 (118)
316 1nub_A Basement membrane prote 97.4 4.9E-05 1.7E-09 58.3 2.3 61 93-155 156-217 (229)
317 1pul_A Hypothetical protein C3 95.3 0.12 4E-06 35.3 7.8 69 52-122 19-94 (125)
318 4fl4_A Glycoside hydrolase fam 94.7 0.11 3.8E-06 33.2 6.0 54 136-198 22-75 (88)
319 2qpt_A EH domain-containing pr 94.5 0.079 2.7E-06 45.9 6.8 67 126-204 456-522 (550)
320 2qpt_A EH domain-containing pr 94.0 0.14 4.8E-06 44.4 7.3 62 92-156 458-519 (550)
321 4dh2_B Dockerin type 1; cellul 93.9 0.09 3.1E-06 33.2 4.3 52 138-198 9-60 (82)
322 4fl4_A Glycoside hydrolase fam 93.7 0.11 3.6E-06 33.2 4.5 60 100-159 22-81 (88)
323 2l5y_A Stromal interaction mol 92.7 0.95 3.2E-05 31.9 8.5 58 94-155 17-74 (150)
324 4dh2_B Dockerin type 1; cellul 92.0 0.14 4.7E-06 32.3 3.2 58 102-159 9-66 (82)
325 1wlm_A Protein CGI-38; structu 91.2 2.2 7.6E-05 30.1 9.1 67 55-122 15-90 (151)
326 2kav_A Sodium channel protein 90.9 0.56 1.9E-05 32.2 5.5 64 130-201 45-110 (129)
327 2ccl_B Endo-1,4-beta-xylanase 90.8 0.58 2E-05 27.7 5.0 50 138-198 6-55 (63)
328 3ul4_B Cellulosome enzyme, doc 90.5 0.56 1.9E-05 28.0 4.7 49 138-198 7-55 (65)
329 2y3n_B Cellulosomal family-48 89.5 0.74 2.5E-05 28.0 4.8 54 102-160 8-63 (71)
330 2l5y_A Stromal interaction mol 89.3 2.2 7.5E-05 30.0 7.6 64 53-121 13-76 (150)
331 3tdu_A DCN1-like protein 1; E2 89.2 3.7 0.00013 30.4 9.3 69 54-123 3-72 (200)
332 2ccl_B Endo-1,4-beta-xylanase 88.9 1.3 4.5E-05 26.1 5.5 54 102-157 6-59 (63)
333 2jrf_A Tubulin polymerization- 88.8 1.6 5.4E-05 31.8 6.8 66 56-122 9-83 (184)
334 3kev_A Galieria sulfuraria DCU 88.8 5.8 0.0002 29.3 14.6 137 52-200 4-160 (199)
335 2kav_A Sodium channel protein 87.8 0.91 3.1E-05 31.1 4.8 83 58-157 20-111 (129)
336 2vn6_B Endoglucanase A; cell a 87.5 1.9 6.5E-05 25.5 5.6 47 138-198 6-52 (64)
337 2vn6_B Endoglucanase A; cell a 87.2 0.8 2.8E-05 27.2 3.8 53 102-159 6-58 (64)
338 3kev_A Galieria sulfuraria DCU 86.7 4.4 0.00015 29.9 8.3 64 94-158 9-73 (199)
339 4dck_A Sodium channel protein 86.4 1.6 5.4E-05 31.4 5.6 61 132-200 24-86 (168)
340 3tdu_A DCN1-like protein 1; E2 85.7 2.3 7.7E-05 31.6 6.3 65 94-159 6-72 (200)
341 1pul_A Hypothetical protein C3 84.8 6.9 0.00023 26.5 7.8 65 94-159 24-95 (125)
342 3ul4_B Cellulosome enzyme, doc 84.1 1 3.5E-05 26.8 3.2 54 102-158 7-60 (65)
343 4gba_A DCN1-like protein 3; E3 83.7 3.7 0.00013 30.9 6.8 65 94-159 8-73 (221)
344 2y3n_B Cellulosomal family-48 83.3 1.2 4.2E-05 27.0 3.3 47 138-198 8-56 (71)
345 2ecc_A Homeobox and leucine zi 83.2 1.6 5.5E-05 26.9 3.9 47 10-63 7-53 (76)
346 2k60_A Protein (stromal intera 83.0 1.5 5.2E-05 30.8 4.1 58 94-156 17-75 (150)
347 3a03_A T-cell leukemia homeobo 83.0 1.3 4.6E-05 25.2 3.3 45 11-62 2-46 (56)
348 1daq_A Endoglucanase SS, CELS; 83.0 1.2 4E-05 27.1 3.1 48 138-198 8-55 (71)
349 2jrf_A Tubulin polymerization- 83.0 6.8 0.00023 28.5 7.7 68 128-200 8-80 (184)
350 3kcp_A Cellulosomal-scaffoldin 82.9 0.84 2.9E-05 36.2 3.1 52 137-200 250-301 (321)
351 1wlm_A Protein CGI-38; structu 82.9 6.7 0.00023 27.6 7.4 68 129-201 16-88 (151)
352 1k61_A Mating-type protein alp 82.5 2.2 7.4E-05 24.6 4.2 48 11-62 3-50 (60)
353 1bw5_A ISL-1HD, insulin gene e 82.4 2.2 7.5E-05 25.2 4.2 46 10-62 7-52 (66)
354 2da1_A Alpha-fetoprotein enhan 81.7 3 0.0001 24.9 4.7 46 10-62 11-56 (70)
355 1yz8_P Pituitary homeobox 2; D 81.1 3.3 0.00011 24.5 4.7 46 10-62 7-52 (68)
356 2dmu_A Homeobox protein goosec 80.8 2.7 9.1E-05 25.1 4.2 46 10-62 11-56 (70)
357 4gba_A DCN1-like protein 3; E3 80.8 16 0.00054 27.5 14.5 70 53-123 4-73 (221)
358 1ig7_A Homeotic protein MSX-1; 80.6 2.1 7.2E-05 24.5 3.6 45 11-62 5-49 (58)
359 1ahd_P Antennapedia protein mu 80.2 3.7 0.00013 24.4 4.7 46 10-62 6-51 (68)
360 2dn0_A Zinc fingers and homeob 79.2 3.1 0.00011 25.3 4.3 46 10-62 12-57 (76)
361 1jgg_A Segmentation protein EV 79.2 2.3 7.9E-05 24.5 3.5 46 10-62 5-50 (60)
362 3bq3_A Defective in cullin ned 78.8 21 0.00071 27.7 13.9 143 51-200 70-234 (270)
363 2hdd_A Protein (engrailed home 78.4 2.6 8.8E-05 24.4 3.5 46 10-62 7-52 (61)
364 2dmn_A Homeobox protein TGIF2L 78.4 3.3 0.00011 25.8 4.2 50 10-63 11-60 (83)
365 3a02_A Homeobox protein arista 78.3 2.4 8.3E-05 24.4 3.4 45 11-62 4-48 (60)
366 2cra_A Homeobox protein HOX-B1 78.1 2.8 9.4E-05 25.1 3.7 46 10-62 11-56 (70)
367 3nau_A Zinc fingers and homeob 77.9 2.6 8.9E-05 25.1 3.4 44 12-62 10-53 (66)
368 2vi6_A Homeobox protein nanog; 77.0 2.9 0.0001 24.2 3.5 46 10-62 7-52 (62)
369 1akh_A Protein (mating-type pr 76.9 2.6 9E-05 24.3 3.3 46 10-62 9-54 (61)
370 1ldd_A APC2WHB, anaphase promo 76.8 5.9 0.0002 24.2 4.8 48 111-158 9-58 (74)
371 2da2_A Alpha-fetoprotein enhan 76.6 3.2 0.00011 24.7 3.7 46 10-62 11-56 (70)
372 2h1k_A IPF-1, pancreatic and d 76.5 3.2 0.00011 24.2 3.6 46 10-62 7-52 (63)
373 2e1o_A Homeobox protein PRH; D 76.2 3.3 0.00011 24.8 3.6 46 10-62 11-56 (70)
374 1puf_B PRE-B-cell leukemia tra 76.2 4 0.00014 24.5 4.1 48 11-62 6-53 (73)
375 2dmq_A LIM/homeobox protein LH 75.8 3.4 0.00012 25.4 3.7 46 10-62 11-56 (80)
376 1wh5_A ZF-HD homeobox family p 75.8 3.4 0.00011 25.6 3.7 51 10-63 21-71 (80)
377 1x2n_A Homeobox protein pknox1 75.3 4.5 0.00015 24.3 4.2 49 10-62 11-59 (73)
378 2dmt_A Homeobox protein BARH-l 75.3 3.3 0.00011 25.5 3.6 46 10-62 21-66 (80)
379 2k60_A Protein (stromal intera 75.3 3 0.0001 29.3 3.6 64 52-120 12-75 (150)
380 1du6_A PBX1, homeobox protein 75.1 2.8 9.6E-05 24.5 3.1 49 11-63 8-56 (64)
381 1wi3_A DNA-binding protein SAT 74.5 3.3 0.00011 24.9 3.1 48 10-63 11-58 (71)
382 3uo9_A Glutaminase kidney isof 73.9 13 0.00043 31.6 7.6 87 131-223 71-161 (534)
383 1ftt_A TTF-1 HD, thyroid trans 73.6 4 0.00014 24.2 3.5 46 10-62 6-51 (68)
384 2ly9_A Zinc fingers and homeob 73.5 4.1 0.00014 24.6 3.6 47 10-63 10-56 (74)
385 1daq_A Endoglucanase SS, CELS; 73.5 1.4 4.9E-05 26.7 1.5 54 102-159 8-61 (71)
386 1wh7_A ZF-HD homeobox family p 73.4 9.4 0.00032 23.5 5.3 51 10-63 21-71 (80)
387 2hi3_A Homeodomain-only protei 72.6 4.4 0.00015 24.4 3.6 47 10-62 6-52 (73)
388 2k40_A Homeobox expressed in E 72.6 5.4 0.00019 23.5 4.0 45 11-62 6-50 (67)
389 3rkq_A Homeobox protein NKX-2. 72.3 5 0.00017 22.7 3.7 46 10-62 6-51 (58)
390 2dms_A Homeobox protein OTX2; 71.8 4.9 0.00017 24.7 3.7 46 10-62 11-56 (80)
391 2djn_A Homeobox protein DLX-5; 71.7 3 0.0001 24.9 2.6 47 10-63 11-57 (70)
392 1fjl_A Paired protein; DNA-bin 71.2 6.3 0.00022 24.2 4.2 46 10-62 22-67 (81)
393 1mnm_C Protein (MAT alpha-2 tr 70.9 6.1 0.00021 24.7 4.1 49 10-62 31-79 (87)
394 2l7z_A Homeobox protein HOX-A1 70.8 4.9 0.00017 24.2 3.5 46 10-62 11-56 (73)
395 1nk2_P Homeobox protein VND; h 70.1 5.4 0.00018 24.3 3.6 46 10-62 13-58 (77)
396 3k2a_A Homeobox protein MEIS2; 69.7 6.5 0.00022 23.2 3.8 48 12-63 4-51 (67)
397 2kt0_A Nanog, homeobox protein 69.5 5.8 0.0002 24.5 3.8 46 10-62 26-71 (84)
398 1le8_B Mating-type protein alp 68.1 7.4 0.00025 24.1 4.0 49 11-63 7-55 (83)
399 2da3_A Alpha-fetoprotein enhan 68.0 2.8 9.4E-05 25.8 2.0 46 10-62 21-66 (80)
400 1e91_A Paired amphipathic heli 68.0 16 0.00055 22.8 5.6 26 191-216 58-83 (85)
401 1b72_B Protein (PBX1); homeodo 68.0 5.9 0.0002 24.7 3.6 49 11-63 6-54 (87)
402 1puf_A HOX-1.7, homeobox prote 67.9 6.3 0.00022 24.0 3.6 46 10-62 17-62 (77)
403 1uhs_A HOP, homeodomain only p 66.9 4.7 0.00016 24.2 2.8 46 11-62 6-51 (72)
404 2da5_A Zinc fingers and homeob 66.8 6.8 0.00023 23.7 3.6 45 11-62 12-56 (75)
405 1zq3_P PRD-4, homeotic bicoid 66.4 4.1 0.00014 24.1 2.4 46 10-62 6-51 (68)
406 2cue_A Paired box protein PAX6 65.8 4.7 0.00016 24.8 2.7 46 10-62 11-56 (80)
407 3bq3_A Defective in cullin ned 65.6 45 0.0015 25.8 13.6 170 13-201 71-268 (270)
408 1b8i_A Ultrabithorax, protein 65.4 7.2 0.00025 24.0 3.5 46 10-62 24-69 (81)
409 3a01_A Homeodomain-containing 64.9 7.4 0.00025 24.7 3.6 46 10-62 21-66 (93)
410 4dck_A Sodium channel protein 64.2 4.8 0.00016 28.9 2.8 28 176-203 23-50 (168)
411 2m0c_A Homeobox protein arista 63.6 8.7 0.0003 23.0 3.6 47 10-63 13-59 (75)
412 2lk2_A Homeobox protein TGIF1; 62.9 10 0.00035 24.0 3.9 49 11-63 10-58 (89)
413 2da4_A Hypothetical protein DK 61.7 3.5 0.00012 25.4 1.5 50 10-62 12-61 (80)
414 2l9r_A Homeobox protein NKX-3. 61.5 11 0.00036 22.6 3.6 45 11-62 9-53 (69)
415 2dmp_A Zinc fingers and homeob 60.7 9.7 0.00033 24.0 3.5 45 11-62 18-62 (89)
416 3nar_A ZHX1, zinc fingers and 60.5 10 0.00035 24.2 3.7 47 10-63 29-75 (96)
417 3uo9_A Glutaminase kidney isof 60.0 29 0.00098 29.5 7.0 61 95-156 71-136 (534)
418 2f05_A Paired amphipathic heli 60.0 18 0.00062 23.6 4.8 27 191-217 58-84 (105)
419 3bux_B E3 ubiquitin-protein li 57.7 69 0.0024 25.4 9.6 101 50-156 157-261 (329)
420 2r5y_A Homeotic protein sex co 56.3 8.1 0.00028 24.2 2.6 46 10-62 32-77 (88)
421 2ecb_A Zinc fingers and homeob 55.6 13 0.00045 23.5 3.5 46 10-62 15-60 (89)
422 1b72_A Protein (homeobox prote 55.3 8 0.00027 24.7 2.5 46 10-62 38-83 (97)
423 3d1n_I POU domain, class 6, tr 52.0 18 0.00063 25.1 4.1 45 11-62 98-142 (151)
424 2cuf_A FLJ21616 protein; homeo 51.4 17 0.00057 23.1 3.5 44 11-61 12-70 (95)
425 3bux_B E3 ubiquitin-protein li 50.3 93 0.0032 24.6 11.3 95 94-201 164-261 (329)
426 1au7_A Protein PIT-1, GHF-1; c 47.5 25 0.00084 24.4 4.2 44 11-61 92-135 (146)
427 3kcp_A Cellulosomal-scaffoldin 45.7 6.6 0.00023 31.2 1.0 56 101-159 250-305 (321)
428 1e3o_C Octamer-binding transcr 45.2 27 0.00093 24.5 4.2 44 11-61 106-149 (160)
429 2xsd_C POU domain, class 3, tr 43.4 28 0.00095 24.7 4.0 44 11-61 104-147 (164)
430 2d5v_A Hepatocyte nuclear fact 40.3 27 0.00092 24.6 3.5 45 11-62 102-146 (164)
431 3op0_A Signal transduction pro 39.8 1.4E+02 0.0047 23.6 10.3 94 94-200 149-245 (323)
432 1g1e_B SIN3A; four-helix bundl 39.7 21 0.00073 22.5 2.6 25 192-216 65-89 (89)
433 3op0_A Signal transduction pro 38.7 1.4E+02 0.0049 23.5 9.5 102 51-157 143-247 (323)
434 3ol3_A Putative uncharacterize 37.4 85 0.0029 20.5 6.6 62 109-174 28-91 (107)
435 2da7_A Zinc finger homeobox pr 37.2 28 0.00095 20.9 2.6 44 15-65 14-57 (71)
436 2kzs_A Death-associated protei 34.9 35 0.0012 21.4 2.8 47 111-158 17-63 (94)
437 2e19_A Transcription factor 8; 34.1 27 0.00094 20.2 2.3 43 13-62 10-52 (64)
438 2ld7_B Paired amphipathic heli 33.0 17 0.00059 22.1 1.3 30 187-216 40-73 (75)
439 2lky_A Uncharacterized protein 32.0 63 0.0022 21.3 3.9 60 109-174 25-84 (112)
440 4dra_E Centromere protein X; D 32.0 93 0.0032 19.3 6.1 20 139-158 62-81 (84)
441 3b0b_C CENP-X, centromere prot 31.6 92 0.0032 19.2 5.9 65 93-158 13-77 (81)
442 4dxt_A SUN domain-containing p 29.9 32 0.0011 25.3 2.5 32 166-197 4-35 (198)
443 2m0n_A Putative uncharacterize 28.4 55 0.0019 21.6 3.1 59 114-176 30-93 (112)
444 2kvc_A Putative uncharacterize 28.4 59 0.002 21.1 3.2 59 109-173 23-81 (103)
445 3nph_B Phycobilisome 32.1 kDa 27.9 85 0.0029 21.8 4.2 23 187-209 47-69 (148)
446 2czy_A Paired amphipathic heli 27.6 1E+02 0.0036 18.5 6.7 24 193-216 47-70 (77)
447 2cr7_A Paired amphipathic heli 27.4 94 0.0032 18.9 4.0 24 193-216 53-76 (80)
448 2k9m_A RNA polymerase sigma fa 27.2 26 0.00089 23.8 1.5 42 41-82 40-81 (130)
449 3ohw_B Phycobilisome LCM core- 27.1 89 0.0031 21.7 4.2 23 187-209 59-81 (148)
450 3te3_A Polycystic kidney disea 26.9 74 0.0025 16.6 3.7 16 143-158 2-17 (39)
451 2y1n_A E3 ubiquitin-protein li 25.0 2.8E+02 0.0097 22.6 9.1 103 50-157 133-238 (389)
452 2ky4_A Phycobilisome linker po 24.6 75 0.0026 22.1 3.4 23 187-209 50-72 (149)
453 3rdw_A Putative arsenate reduc 24.0 66 0.0023 21.2 3.1 63 136-206 34-96 (121)
454 2y1n_A E3 ubiquitin-protein li 22.7 3.2E+02 0.011 22.3 11.1 94 94-200 140-236 (389)
455 3pru_C Phycobilisome 32.1 kDa 22.2 91 0.0031 21.8 3.5 23 187-209 52-74 (154)
456 3l1p_A POU domain, class 5, tr 22.0 49 0.0017 23.0 2.2 15 51-65 102-116 (155)
457 4gif_A Polycystic kidney disea 21.9 1.1E+02 0.0036 16.6 3.7 16 143-158 2-17 (45)
458 3osj_A Phycobilisome LCM core- 21.8 89 0.0031 21.7 3.4 23 187-209 58-80 (147)
459 3v9r_A MHF1, uncharacterized p 21.7 1.6E+02 0.0054 18.5 5.0 28 184-211 62-89 (90)
460 1vd2_A Protein kinase C, IOTA 20.4 1.3E+02 0.0045 18.8 3.7 22 125-146 62-83 (89)
461 3f0i_A Arsenate reductase; str 20.4 1.9E+02 0.0064 18.9 4.9 55 145-206 41-95 (119)
462 2oy9_A UPF0223 protein BH2638; 20.4 1.8E+02 0.0061 18.6 5.9 40 72-112 36-75 (98)
No 1
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.93 E-value=1e-24 Score=163.80 Aligned_cols=173 Identities=23% Similarity=0.449 Sum_probs=140.9
Q ss_pred CCchhhhHhhcCCChhHHHHHHhccCccCCCC-CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHH
Q psy8447 40 STSTPVVVQVSGLPPSNVTERYKGFSPFSFQG-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 118 (229)
Q Consensus 40 ~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~-i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~ 118 (229)
+.++..+.+.+++++.++..++..|+..+.++ |+..+|..++..++........+..+|+.+|.+++|.|++.||+.++
T Consensus 3 ~~el~~l~~~~~~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~ 82 (183)
T 1s6c_A 3 PEGLEQLEAQTNFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTAL 82 (183)
T ss_dssp ---CHHHHHHSSCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 34667788888999999999999999865555 99999999999987764455558999999999999999999999999
Q ss_pred HhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh---cCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHH
Q psy8447 119 SCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI---SHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195 (229)
Q Consensus 119 ~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef 195 (229)
.........+.++.+|+.+|.+++|+|+.+||..++..+.. .......+++...+.+..+|+.+|.+++|.|+++||
T Consensus 83 ~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef 162 (183)
T 1s6c_A 83 SILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162 (183)
T ss_dssp HHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred HHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 98887888899999999999999999999999999988731 111111233233456888999999999999999999
Q ss_pred HHHHhcChHHHHHhccc
Q psy8447 196 QQSVTDEPLLLEAFGQC 212 (229)
Q Consensus 196 ~~~~~~~~~~~~~~~~~ 212 (229)
+.++...|.+.+.|+.+
T Consensus 163 ~~~~~~~~~~~~~l~~~ 179 (183)
T 1s6c_A 163 LESXQEDDNIMRSLQLF 179 (183)
T ss_dssp HHHTTSCCHHHHHHHHH
T ss_pred HHHHhcChHHHHHHHHh
Confidence 99999999998888653
No 2
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.92 E-value=3.8e-24 Score=166.25 Aligned_cols=177 Identities=23% Similarity=0.427 Sum_probs=146.5
Q ss_pred CCCCCchhhhHhhcCCChhHHHHHHhccCccCCCC-CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHH
Q psy8447 37 VPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQG-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWV 115 (229)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~-i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~ 115 (229)
...+.++..+...++++..+++.+++.|+..+.++ |+..+|..++..++........+..+|+.+|.+++|.|+|.||+
T Consensus 33 ~l~~~~l~~l~~~~~~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~ 112 (224)
T 1s1e_A 33 CHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFV 112 (224)
T ss_dssp -----CHHHHHHHSSCCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHH
Confidence 35567788899999999999999999999875444 99999999999987654455558999999999999999999999
Q ss_pred HHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh---hcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccH
Q psy8447 116 LGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL---ISHPQDEDPDEGVRDLVELALRKMDYDKDGKISF 192 (229)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~ 192 (229)
.++.........+.++.+|+.||.|++|+|+.+||..++..++ +.......++...++.+..+|+.+|.|+||.|+|
T Consensus 113 ~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~ 192 (224)
T 1s1e_A 113 TALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 192 (224)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEH
T ss_pred HHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeH
Confidence 9999888788889999999999999999999999999998863 1111111222234456889999999999999999
Q ss_pred HHHHHHHhcChHHHHHhcccC
Q psy8447 193 QDFQQSVTDEPLLLEAFGQCL 213 (229)
Q Consensus 193 ~ef~~~~~~~~~~~~~~~~~~ 213 (229)
+||+.++...|.+.+.|+...
T Consensus 193 ~EF~~~~~~~~~l~~~l~~~~ 213 (224)
T 1s1e_A 193 DEFLESCQEDDNIMRSLQLFQ 213 (224)
T ss_dssp HHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCHHHHHHhcCCC
Confidence 999999999999999888655
No 3
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.5e-23 Score=158.35 Aligned_cols=173 Identities=22% Similarity=0.403 Sum_probs=143.9
Q ss_pred CCCCCchhhhHhhcCCChhHHHHHHhccCcc-CCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHH
Q psy8447 37 VPISTSTPVVVQVSGLPPSNVTERYKGFSPF-SFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWV 115 (229)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~-d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~ 115 (229)
..+..++..+.+.++++..+++.++..|+.. ..+.|+..+|..++..++....+...+..+|+.+|.+++|.|++.||+
T Consensus 7 ~l~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~ 86 (190)
T 2l2e_A 7 KLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFI 86 (190)
T ss_dssp CSCHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHH
T ss_pred cCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHH
Confidence 3455556666667778889999999999987 345599999999999987665666678999999999999999999999
Q ss_pred HHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH----hhc--CC-CCCCChHHHHHHHHHHHHHcCCCCCC
Q psy8447 116 LGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS----LIS--HP-QDEDPDEGVRDLVELALRKMDYDKDG 188 (229)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~----~~~--~~-~~~~~~~~~~~~~~~~~~~~d~~~dg 188 (229)
.++.........+.++.+|+.+|.+++|+|+.+||..++..+ +.. .+ .... ..+.+..+|+.+|.+++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~f~~~D~d~dG 162 (190)
T 2l2e_A 87 CALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDT----PEKRVNKIFNMMDKNKDG 162 (190)
T ss_dssp HHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCC----THHHHHHHHHHHTCCSSC
T ss_pred HHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCccccccc----HHHHHHHHHHHhCCCCCC
Confidence 999988877888999999999999999999999999999874 221 11 1111 233488899999999999
Q ss_pred cccHHHHHHHHhcChHHHHHhcccC
Q psy8447 189 KISFQDFQQSVTDEPLLLEAFGQCL 213 (229)
Q Consensus 189 ~Is~~ef~~~~~~~~~~~~~~~~~~ 213 (229)
.|+++||..++...|.+...|+...
T Consensus 163 ~I~~~Ef~~~~~~~~~~~~~l~~~d 187 (190)
T 2l2e_A 163 QLTLEEFCEGSKRDPTIVSALSLYD 187 (190)
T ss_dssp CBCHHHHHHHHHTCTHHHHHHHTTC
T ss_pred cCcHHHHHHHHHhCcHHHHHHHHHh
Confidence 9999999999999999998887653
No 4
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.91 E-value=8.3e-24 Score=164.82 Aligned_cols=174 Identities=25% Similarity=0.455 Sum_probs=144.2
Q ss_pred CCchhhhHhhcCCChhHHHHHHhccCccCCCC-CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHH
Q psy8447 40 STSTPVVVQVSGLPPSNVTERYKGFSPFSFQG-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 118 (229)
Q Consensus 40 ~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~-i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~ 118 (229)
+..+..+.+.+++++.++..+++.|...+.++ |+..+|..++..+.+.......+..+|+.+|.|++|.|+|+||+.++
T Consensus 49 ~~~l~~l~~~~~~s~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l 128 (229)
T 3dd4_A 49 PEALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGL 128 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence 34456777778899999999999997777665 99999999999987766777778999999999999999999999999
Q ss_pred HhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCC---CCCChHHHHHHHHHHHHHcCCCCCCcccHHHH
Q psy8447 119 SCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQ---DEDPDEGVRDLVELALRKMDYDKDGKISFQDF 195 (229)
Q Consensus 119 ~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef 195 (229)
.........+.++.+|+.||.|++|+|+.+||..++..++..... ........++.++.+|+.+|.|+||.|+|+||
T Consensus 129 ~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF 208 (229)
T 3dd4_A 129 SILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208 (229)
T ss_dssp HHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHH
T ss_pred HHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHH
Confidence 998888888999999999999999999999999999987421110 00011112224888999999999999999999
Q ss_pred HHHHhcChHHHHHhcccC
Q psy8447 196 QQSVTDEPLLLEAFGQCL 213 (229)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~ 213 (229)
..++...|.+.+.|+.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~D 226 (229)
T 3dd4_A 209 IESCQKDENIMRSMQLFE 226 (229)
T ss_dssp HHHHHTCHHHHHHHHHHT
T ss_pred HHHHHhCHHHHHHHHhcc
Confidence 999999999999887653
No 5
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.91 E-value=2.3e-23 Score=157.56 Aligned_cols=182 Identities=26% Similarity=0.477 Sum_probs=146.2
Q ss_pred CCCCCchhhhHhhcCCChhHHHHHHhccCccC-CCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHH
Q psy8447 37 VPISTSTPVVVQVSGLPPSNVTERYKGFSPFS-FQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWV 115 (229)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d-~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~ 115 (229)
+.....+..+...+.+++.++..++..|+..+ .+.|+..+|..++..++........+..+|..+|.+++|.|++.||.
T Consensus 7 ~l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~ 86 (193)
T 1bjf_A 7 KLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFI 86 (193)
T ss_dssp CCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHH
T ss_pred cCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 34555677778888899999999999999863 44499999999999987766666668999999999999999999999
Q ss_pred HHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCC-CCCChH--HHHHHHHHHHHHcCCCCCCcccH
Q psy8447 116 LGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQ-DEDPDE--GVRDLVELALRKMDYDKDGKISF 192 (229)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~d~~~dg~Is~ 192 (229)
.++..+....+.+.++.+|+.+|.|++|+|+.+||..++..+...... ...+.. ..+..+..+|+.+|.+++|.|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~ 166 (193)
T 1bjf_A 87 IALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL 166 (193)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECH
T ss_pred HHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeH
Confidence 999988888888999999999999999999999999999876321110 111211 23445888999999999999999
Q ss_pred HHHHHHHhcChHHHHHhcccCCChHHH
Q psy8447 193 QDFQQSVTDEPLLLEAFGQCLPSDAAR 219 (229)
Q Consensus 193 ~ef~~~~~~~~~~~~~~~~~~~~~~~~ 219 (229)
+||..++...|.+.++| ...+.+.|.
T Consensus 167 ~Ef~~~~~~~~~~~~~~-~~D~~~dG~ 192 (193)
T 1bjf_A 167 EEFIRGAKSDPSIVRLL-QCDPSSAGQ 192 (193)
T ss_dssp HHHHHHHHHCTHHHHTT-CC-------
T ss_pred HHHHHHHhcCHHHHHHh-ccCCCCCCC
Confidence 99999999999999999 666666553
No 6
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.91 E-value=2.2e-23 Score=157.38 Aligned_cols=176 Identities=26% Similarity=0.424 Sum_probs=143.9
Q ss_pred CCCCchhhhHhhcCCChhHHHHHHhccCccC-CCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHH
Q psy8447 38 PISTSTPVVVQVSGLPPSNVTERYKGFSPFS-FQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVL 116 (229)
Q Consensus 38 ~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d-~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~ 116 (229)
..+..+..+...++++..++..++..|+..+ .+.|+..+|..++..+.+...+...+..+|..+|.+++|.|++.||+.
T Consensus 8 l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~ 87 (190)
T 1g8i_A 8 LKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQ 87 (190)
T ss_dssp CCHHHHHHHHHTSSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred CCHHHHHHHHHccCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHH
Confidence 4455667777788899999999999999874 444999999999998854334455589999999999999999999999
Q ss_pred HHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh---cCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHH
Q psy8447 117 GLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI---SHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQ 193 (229)
Q Consensus 117 ~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ 193 (229)
++.........+.++.+|+.+|.+++|+|+.+||..++..+.. ............++.+..+|+.+|.+++|.|+++
T Consensus 88 ~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ 167 (190)
T 1g8i_A 88 ALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQ 167 (190)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHH
T ss_pred HHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHH
Confidence 9998887888889999999999999999999999999987521 1100011112234458889999999999999999
Q ss_pred HHHHHHhcChHHHHHhcccC
Q psy8447 194 DFQQSVTDEPLLLEAFGQCL 213 (229)
Q Consensus 194 ef~~~~~~~~~~~~~~~~~~ 213 (229)
||..++...|.+.+.|+.+.
T Consensus 168 ef~~~~~~~~~~~~~~~~~~ 187 (190)
T 1g8i_A 168 EFQEGSKADPSIVQALSLYD 187 (190)
T ss_dssp HHHHHHHHCHHHHHHHCCBT
T ss_pred HHHHHHHhChHHHHHHhhhc
Confidence 99999999999999887653
No 7
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.91 E-value=2.2e-23 Score=165.07 Aligned_cols=175 Identities=25% Similarity=0.447 Sum_probs=146.9
Q ss_pred CCCCchhhhHhhcCCChhHHHHHHhccCccCCCC-CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHH
Q psy8447 38 PISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQG-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVL 116 (229)
Q Consensus 38 ~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~-i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~ 116 (229)
.....+..+...++++..++..++..|+..+.++ |+..+|..++..+++.......+..+|..+|.|++|.|+|+||+.
T Consensus 74 l~~e~l~~l~~~~~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~ 153 (256)
T 2jul_A 74 HQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVV 153 (256)
T ss_dssp --CTHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHH
Confidence 4455677888889999999999999999875554 999999999999876555556689999999999999999999999
Q ss_pred HHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh---cCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHH
Q psy8447 117 GLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI---SHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQ 193 (229)
Q Consensus 117 ~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ 193 (229)
++..+......+.++.+|+.+|.|++|+|+.+||..++..+.. ..+.....+...++.+..+|+.+|.|+||.|+++
T Consensus 154 ~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~ 233 (256)
T 2jul_A 154 GLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTID 233 (256)
T ss_dssp HHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHH
T ss_pred HHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHH
Confidence 9999888888899999999999999999999999999988742 1111222222345568999999999999999999
Q ss_pred HHHHHHhcChHHHHHhccc
Q psy8447 194 DFQQSVTDEPLLLEAFGQC 212 (229)
Q Consensus 194 ef~~~~~~~~~~~~~~~~~ 212 (229)
||+.++...|.+.+.|+.+
T Consensus 234 Ef~~~~~~~~~l~~~l~~~ 252 (256)
T 2jul_A 234 EFLETCQKDENIMNSMQLF 252 (256)
T ss_dssp HHHHHHHHCSSHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHhh
Confidence 9999999999999888753
No 8
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.91 E-value=1.2e-23 Score=158.70 Aligned_cols=178 Identities=24% Similarity=0.380 Sum_probs=145.9
Q ss_pred CCCCCCCchhhhHhhcCCChhHHHHHHhccCccC-CCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHH
Q psy8447 35 AGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFS-FQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDE 113 (229)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d-~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~e 113 (229)
.++....++..+.+.+.+++.++..++..|+..+ .+.|+..+|..++..++....+...+..+|..+|.+++|.|++.|
T Consensus 5 ~~~l~~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e 84 (190)
T 1fpw_A 5 TSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEE 84 (190)
T ss_dssp SCCSTTHHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHH
T ss_pred cCCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHH
Confidence 3445667778888888999999999999999873 445999999999999865444445589999999999999999999
Q ss_pred HHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCC---CCCChHHHHHHHHHHHHHcCCCCCCcc
Q psy8447 114 WVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQ---DEDPDEGVRDLVELALRKMDYDKDGKI 190 (229)
Q Consensus 114 f~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~dg~I 190 (229)
|..++..+....+.+.++.+|+.+|.+++|+|+.+||..++..+...... ....+....+.+..+|+.+|.+++|.|
T Consensus 85 f~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I 164 (190)
T 1fpw_A 85 FITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYI 164 (190)
T ss_dssp HHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEE
T ss_pred HHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcC
Confidence 99999988877788899999999999999999999999999875321110 001111234458889999999999999
Q ss_pred cHHHHHHHHhcChHHHHHhccc
Q psy8447 191 SFQDFQQSVTDEPLLLEAFGQC 212 (229)
Q Consensus 191 s~~ef~~~~~~~~~~~~~~~~~ 212 (229)
+++||..++...|.+.+.|+..
T Consensus 165 ~~~Ef~~~~~~~~~~~~~~~~~ 186 (190)
T 1fpw_A 165 TLDEFREGSKVDPSIIGALNLY 186 (190)
T ss_dssp EHHHHHHHHHSSTTHHHHHHHH
T ss_pred cHHHHHHHHHhChHHHHHHhhc
Confidence 9999999999999998888754
No 9
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.91 E-value=2.6e-23 Score=159.24 Aligned_cols=178 Identities=16% Similarity=0.288 Sum_probs=150.3
Q ss_pred CCCCCCCchhhhHhhcCCChhHHHHHHhccCccC-CCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHH
Q psy8447 35 AGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFS-FQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDE 113 (229)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d-~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~e 113 (229)
.|.+...++..+.+.++++..++..++..|+..+ .+.|+..+|..++..++........+..+|+.+|.+++|.|++.|
T Consensus 13 ~g~l~~~el~~~~~~~~~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~E 92 (207)
T 2d8n_A 13 SGALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKE 92 (207)
T ss_dssp TTCCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHH
Confidence 3447777888889999999999999999999875 445999999999999876534455589999999999999999999
Q ss_pred HHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH----h----hcCCCCCCChHHHHHHHHHHHHHcCCC
Q psy8447 114 WVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS----L----ISHPQDEDPDEGVRDLVELALRKMDYD 185 (229)
Q Consensus 114 f~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~d~~ 185 (229)
|+.++..+......+.++.+|+.+|.+++|+|+.+||..++..+ + ...+... ...++.+..+|+.+|.+
T Consensus 93 f~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~---~~~~~~~~~~f~~~D~d 169 (207)
T 2d8n_A 93 YVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDE---NTPEKRAEKIWKYFGKN 169 (207)
T ss_dssp HHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTT---SSHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCccccc---ccHHHHHHHHHHHcCCC
Confidence 99999988777777889999999999999999999999999886 3 2222211 12334588899999999
Q ss_pred CCCcccHHHHHHHHhcChHHHHHhcccCCC
Q psy8447 186 KDGKISFQDFQQSVTDEPLLLEAFGQCLPS 215 (229)
Q Consensus 186 ~dg~Is~~ef~~~~~~~~~~~~~~~~~~~~ 215 (229)
++|.|+|+||+.++...|.+.+.|+.+.+.
T Consensus 170 ~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~ 199 (207)
T 2d8n_A 170 DDDKLTEKEFIEGTLANKEILRLIQFEPQK 199 (207)
T ss_dssp TTCCEEHHHHHHHHHHCHHHHHHHSCCCSS
T ss_pred CCCcCcHHHHHHHHHhChHHHHHHhhhhHH
Confidence 999999999999999999999999877643
No 10
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.90 E-value=1.9e-23 Score=161.16 Aligned_cols=169 Identities=18% Similarity=0.236 Sum_probs=140.5
Q ss_pred CCCCchhhhHhhcCCChhHHHHHHhccCccCC--------C--C-CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCC
Q psy8447 38 PISTSTPVVVQVSGLPPSNVTERYKGFSPFSF--------Q--G-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCD 106 (229)
Q Consensus 38 ~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~--------~--~-i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~ 106 (229)
.++.++..+...+.+++.++..+++.|+..|. + + |+..+|.. +..++..+. ...+|..+|.+++
T Consensus 31 l~~e~l~~l~~~t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~----~~~lf~~~D~d~d 105 (214)
T 2l4h_A 31 LSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPF----KERICRVFSTSPA 105 (214)
T ss_dssp CCHHHHHHHHSCCSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTT----HHHHHHHHCCSSS
T ss_pred CCHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChH----HHHHHHHhCcCCC
Confidence 34455667777788999999999999998775 3 4 99999998 776665444 3568999999999
Q ss_pred Cc-eeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCC
Q psy8447 107 GV-IHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDY 184 (229)
Q Consensus 107 g~-I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 184 (229)
|. |+|+||+.++...... ...+.++.+|+.||.|++|+|+.+||..++..++........+++.++.+++.+|+.+|.
T Consensus 106 G~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~ 185 (214)
T 2l4h_A 106 KDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDI 185 (214)
T ss_dssp CCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCC
T ss_pred CCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCC
Confidence 99 9999999999987755 446799999999999999999999999999988753222344566777778889999999
Q ss_pred CCCCcccHHHHHHHHhcChHHHHHhcc
Q psy8447 185 DKDGKISFQDFQQSVTDEPLLLEAFGQ 211 (229)
Q Consensus 185 ~~dg~Is~~ef~~~~~~~~~~~~~~~~ 211 (229)
|+||.|+|+||+.++...|.+.+.|+-
T Consensus 186 d~dG~Is~~EF~~~~~~~p~~~~~l~~ 212 (214)
T 2l4h_A 186 DRDGTINLSEFQHVISRSPDFASSFKI 212 (214)
T ss_dssp SCCSSBCSHHHHHHHHTCHHHHHHTSS
T ss_pred CCCCcCCHHHHHHHHHhChHHHHhccC
Confidence 999999999999999999999988763
No 11
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.90 E-value=5.6e-23 Score=157.37 Aligned_cols=176 Identities=25% Similarity=0.391 Sum_probs=141.8
Q ss_pred CCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCC--C---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCce
Q psy8447 35 AGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQ--G---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVI 109 (229)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~--~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I 109 (229)
.+.....++..+...+++++.++..++..|...|.+ + |+..+|..++.. .+ ...+..+..+|..+|.+++|.|
T Consensus 14 ~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~-~~~~~~~~~~f~~~D~d~~g~i 91 (207)
T 2ehb_A 14 MRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NR-NRRNLFADRIFDVFDVKRNGVI 91 (207)
T ss_dssp -------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CT-TCCCHHHHHHHHHHCTTCSSEE
T ss_pred ccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cc-cccHHHHHHHHHHhcCCCCCeE
Confidence 344667888889999999999999998888887754 3 999999999986 22 2223346889999999999999
Q ss_pred eHHHHHHHHHhhcc-CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q psy8447 110 HLDEWVLGLSCFLR-GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDG 188 (229)
Q Consensus 110 ~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg 188 (229)
+|.||+.++..... ....+.++.+|+.+|.|++|+|+.+||..++..+.... ....+++.++.++..+|+.+|.+++|
T Consensus 92 ~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~-g~~~~~~~~~~~~~~~f~~~D~d~dG 170 (207)
T 2ehb_A 92 EFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHES-ELVLSEDMIEVMVDKAFVQADRKNDG 170 (207)
T ss_dssp CHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHCTTCSS
T ss_pred eHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHc-ccccCHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999998764 46678899999999999999999999999997543211 24456777888889999999999999
Q ss_pred cccHHHHHHHHhcChHHHHHhcccC
Q psy8447 189 KISFQDFQQSVTDEPLLLEAFGQCL 213 (229)
Q Consensus 189 ~Is~~ef~~~~~~~~~~~~~~~~~~ 213 (229)
.|+|+||..++...|.+...|+...
T Consensus 171 ~I~~~Ef~~~~~~~~~~~~~~~~~~ 195 (207)
T 2ehb_A 171 KIDIDEWKDFVSLNPSLIKNMTLPY 195 (207)
T ss_dssp EECHHHHHHHHHHCGGGGGGGCCTT
T ss_pred cCcHHHHHHHHHhChHHHHHhcchh
Confidence 9999999999999999988887644
No 12
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.90 E-value=2.9e-23 Score=151.01 Aligned_cols=144 Identities=19% Similarity=0.308 Sum_probs=123.2
Q ss_pred cCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHH
Q psy8447 12 LSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEE 91 (229)
Q Consensus 12 ~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~ 91 (229)
.||++++..+++.|..++.+++|. |+..+|..++..++..++..
T Consensus 3 ~lt~eqi~el~~~F~~~D~d~~G~------------------------------------I~~~El~~~l~~~~~~~~~~ 46 (148)
T 2lmt_A 3 ELTEEQIAEFKDAFVQFDKEGTGK------------------------------------IATRELGTLMRTLGQNPTEA 46 (148)
T ss_dssp SCCSHHHHHHHHHHHHHHCSSCCE------------------------------------EEGGGHHHHHHHHTCCCCHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCe------------------------------------ECHHHHHHHHHhcCCCchHH
Confidence 477888888888888888877776 88889999999988877776
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEG 170 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~ 170 (229)
+ +..++..+|.+++|.|+|.+|+..+..... ....+.++.+|+.||.|++|+|+.+||..++..++... +++
T Consensus 47 ~-~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~-----~~~- 119 (148)
T 2lmt_A 47 E-LQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKV-----TDE- 119 (148)
T ss_dssp H-HHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCC-----CHH-
T ss_pred H-HHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccc-----cHH-
Confidence 6 688999999999999999999998877654 45677899999999999999999999999999876433 333
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 171 VRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 171 ~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.++.+++.+|.|+||.|+|+||+++|++
T Consensus 120 ---e~~~l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 120 ---EIDEMIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp ---HHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred ---HHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 3778999999999999999999998875
No 13
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.90 E-value=3.9e-23 Score=160.06 Aligned_cols=164 Identities=13% Similarity=0.054 Sum_probs=131.4
Q ss_pred ccccchhccCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHH
Q psy8447 2 KRHLMFQLLPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELL 81 (229)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l 81 (229)
|+.|.+...+.++++++..+++.|..++.+++|. |+..+|..++
T Consensus 34 ~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~------------------------------------I~~~El~~~l 77 (220)
T 3sjs_A 34 RNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGT------------------------------------LEINELMMGQ 77 (220)
T ss_dssp HTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSS------------------------------------BCHHHHHHCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCc------------------------------------CcHHHHHHHH
Confidence 3445555666777777777777777777666655 8899999998
Q ss_pred hhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcC
Q psy8447 82 HNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISH 161 (229)
Q Consensus 82 ~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~ 161 (229)
..++...+..+ +..+|+.+|.+++|.|+|+||+.++... ..++.+|+.+|.|++|+|+.+||..++..++...
T Consensus 78 ~~~g~~~~~~~-~~~l~~~~D~d~dg~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~ 150 (220)
T 3sjs_A 78 FPGGIRLSPQT-ALRMMRIFDTDFNGHISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYI 150 (220)
T ss_dssp BGGGBCCCHHH-HHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCC
T ss_pred HHcCCCCCHHH-HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCC
Confidence 88876666655 7889999999999999999999988775 6788999999999999999999999998875432
Q ss_pred CCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhccc-CCChHH
Q psy8447 162 PQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQC-LPSDAA 218 (229)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~-~~~~~~ 218 (229)
+++ .++.+++.+| ++||.|+|+||+.++...+.+...|..+ .....|
T Consensus 151 -----~~~----~~~~l~~~~d-d~dg~I~~~eF~~~~~~l~~~~~~F~~~~D~~~~G 198 (220)
T 3sjs_A 151 -----NQR----TSLLLHRLFA-RGMAFCDLNCWIAICAFAAQTRSAYQMIFMNPYYG 198 (220)
T ss_dssp -----CHH----HHHHHHHHHC---CCSEEHHHHHHHHHHHHHHHHHHHHHHTSGGGC
T ss_pred -----CHH----HHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhcccCCCC
Confidence 333 3677899999 9999999999999999999999999988 666666
No 14
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.89 E-value=2.6e-22 Score=155.94 Aligned_cols=171 Identities=24% Similarity=0.428 Sum_probs=140.8
Q ss_pred CCCchhhhHhhcCCChhHHHHHHhccCccCCC----C-CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHH
Q psy8447 39 ISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQ----G-LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDE 113 (229)
Q Consensus 39 ~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~----~-i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~e 113 (229)
...++..+...+++++.++..++..|...|.+ + |+..+|..++.. .+ ...+..+..+|..+|.+++|.|+|.|
T Consensus 29 ~~~~~~~l~~~~~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~-~~~~~~~~~~f~~~D~d~dG~I~~~E 106 (226)
T 2zfd_A 29 GLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TN-KKESLFADRVFDLFDTKHNGILGFEE 106 (226)
T ss_dssp ---CTHHHHHHSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CS-SCCCHHHHHHHHHHCSSCSSSBCHHH
T ss_pred CHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cC-cccHHHHHHHHHHHcCCCCCcCcHHH
Confidence 34778888888999999999988888877654 3 999999999986 22 22233467899999999999999999
Q ss_pred HHHHHHhhcc-CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccH
Q psy8447 114 WVLGLSCFLR-GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISF 192 (229)
Q Consensus 114 f~~~~~~~~~-~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~ 192 (229)
|+.++..... ....+.++.+|+.+|.|++|+|+.+||..++..+.... ....+++.++.++..+|+.+|.|+||.|+|
T Consensus 107 f~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~-g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~ 185 (226)
T 2zfd_A 107 FARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAES-GMNLKDTVIEDIIDKTFEEADTKHDGKIDK 185 (226)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHCSSCSSEECH
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHhCCCCCCcCcH
Confidence 9999988763 46677899999999999999999999999997543222 344567778888899999999999999999
Q ss_pred HHHHHHHhcChHHHHHhccc
Q psy8447 193 QDFQQSVTDEPLLLEAFGQC 212 (229)
Q Consensus 193 ~ef~~~~~~~~~~~~~~~~~ 212 (229)
+||..++...|.+.+.|+..
T Consensus 186 ~EF~~~~~~~~~~~~~~~~~ 205 (226)
T 2zfd_A 186 EEWRSLVLRHPSLLKNMTLQ 205 (226)
T ss_dssp HHHHHHHHHSGGGGGGGCCG
T ss_pred HHHHHHHHhChHHHHHhchH
Confidence 99999999999998887763
No 15
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.89 E-value=1.3e-22 Score=152.33 Aligned_cols=135 Identities=21% Similarity=0.317 Sum_probs=111.0
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCc-eeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGV-IHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITREE 149 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~-I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~e 149 (229)
|+..+|.. +..++..++. ..+|..+|.+++|. |+|.||+.++...... ...+.++.+|+.||.+++|+|+.+|
T Consensus 45 i~~~el~~-l~~~g~~~~~----~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E 119 (183)
T 1dgu_A 45 VPFEQILS-LPELKANPFK----ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNRED 119 (183)
T ss_dssp SCHHHHHT-STTSSSCTTH----HHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred CcHHHHHH-HHhhhcCcHH----HHHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHH
Confidence 99999998 7766654443 46888999999999 9999999999887755 3456899999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcc
Q psy8447 150 MFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQ 211 (229)
Q Consensus 150 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~ 211 (229)
|..++..++........+++.+...+..++..+|.+++|.|+|+||+.++...|.+.+.|+.
T Consensus 120 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~ 181 (183)
T 1dgu_A 120 LSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 181 (183)
T ss_dssp HHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHHHHCSSCHHHHCCCC
T ss_pred HHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhChHHHHhcCC
Confidence 99999987642222233455555566679999999999999999999999999999887754
No 16
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.89 E-value=2.2e-22 Score=165.96 Aligned_cols=120 Identities=23% Similarity=0.385 Sum_probs=101.7
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..||..++..++..++..+ +..+|..+|.|++|.|+|+||+.++...... ..++.++.+|+.||.|++|+|+.+||
T Consensus 319 IS~eELk~aLrsLG~~~TeeE-I~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eEL 397 (440)
T 3u0k_A 319 ITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 397 (440)
T ss_dssp ECHHHHHHHHHHTTCCCCHHH-HHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHH
T ss_pred ECHHHHHHHHHHcCCCCCHHH-HHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHH
Confidence 999999999999988777777 7899999999999999999999998765543 44578999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
+.++..++.. .+++ .++.+++.+|.|+||.|+|+||+++|+.
T Consensus 398 r~vL~~lGe~-----LSde----EIdeLfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 398 RHVMTNLGEK-----LTDE----EVDEMIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp HHHHHHHTCC-----CCHH----HHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred HHHHHHhCCC-----CCHH----HHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence 9999987543 2333 3778999999999999999999998864
No 17
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.88 E-value=1.4e-21 Score=141.83 Aligned_cols=145 Identities=17% Similarity=0.219 Sum_probs=122.6
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVT 89 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~ 89 (229)
.+.++++++..+...|..++.+++|. |+..+|..++..++..++
T Consensus 2 ~~~l~~~~~~~l~~~F~~~D~d~~G~------------------------------------i~~~el~~~l~~~~~~~~ 45 (153)
T 3ox6_A 2 DRSLRPEEIEELREAFREFDKDKDGY------------------------------------INCRDLGNCMRTMGYMPT 45 (153)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCSSS------------------------------------CCHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHHHHHhCCCCCCc------------------------------------CcHHHHHHHHHHcCCCCC
Confidence 35688888888999999888888776 999999999999877666
Q ss_pred HHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCCh-----HHHHHHHHHHhcCCCCCcccHHHHHHHHHH-HhhcCCC
Q psy8447 90 EEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN-----EELIKFTFLIYDLNNDGFITREEMFQLLRN-SLISHPQ 163 (229)
Q Consensus 90 ~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~-----~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~-~~~~~~~ 163 (229)
..+ +..+|..+|.+++|.|+|+||+.++........ .+.++.+|+.+|.+++|+|+.+||..++.. ++..
T Consensus 46 ~~~-~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~--- 121 (153)
T 3ox6_A 46 EME-LIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQ--- 121 (153)
T ss_dssp HHH-HHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSC---
T ss_pred HHH-HHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC---
Confidence 666 789999999999999999999999987654433 467899999999999999999999999988 4322
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 164 DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
.+++ .+..++..+|.+++|.|+|+||+.++.
T Consensus 122 --~~~~----~~~~~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 122 --VGHR----DIEEIIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp --CCHH----HHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred --CCHH----HHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 2332 378899999999999999999999875
No 18
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.88 E-value=3.9e-22 Score=152.37 Aligned_cols=172 Identities=23% Similarity=0.322 Sum_probs=138.6
Q ss_pred hhhHhhcCCChhHHHHHHhccCcc-CCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc
Q psy8447 44 PVVVQVSGLPPSNVTERYKGFSPF-SFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL 122 (229)
Q Consensus 44 ~~~~~~~~l~~~~~~~l~~~f~~~-d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~ 122 (229)
.++...++++..+++.++..|+.. ..+.|+..+|..++..++. ......+..+|..+|.+++|.|+|+||+.++..+.
T Consensus 11 ~~l~~~t~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~-~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~ 89 (204)
T 1jba_A 11 EENGAVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDN-EEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVL 89 (204)
T ss_dssp HHSSSCCHHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSS-STTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHS
T ss_pred HHHHHhcCCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcC-CCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHc
Confidence 345555667778888888888876 3455999999999999877 44445589999999999999999999999999988
Q ss_pred cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh----cCCCC----CCChHHHHHHHHHHHHHcCCCCCCcccHHH
Q psy8447 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI----SHPQD----EDPDEGVRDLVELALRKMDYDKDGKISFQD 194 (229)
Q Consensus 123 ~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~d~~~dg~Is~~e 194 (229)
.....+.++.+|+.+|.+++|+|+.+||..++..+.. ..... .-......+.+..+|+.+|.+++|.|+++|
T Consensus 90 ~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~E 169 (204)
T 1jba_A 90 RGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNE 169 (204)
T ss_dssp SCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHH
T ss_pred cCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHH
Confidence 7788889999999999999999999999999988721 10000 000002334588899999999999999999
Q ss_pred HHHHHhcChHHHHHhcccCCCh
Q psy8447 195 FQQSVTDEPLLLEAFGQCLPSD 216 (229)
Q Consensus 195 f~~~~~~~~~~~~~~~~~~~~~ 216 (229)
|..++...|.+.+.+.....++
T Consensus 170 f~~~~~~~~~~~~~~~~~~~~~ 191 (204)
T 1jba_A 170 FVEGARRDKWVMKMLQMDLNPS 191 (204)
T ss_dssp HHHHHTTTTTHHHHHHSSSCC-
T ss_pred HHHHHHcChHHHHHHHhccChh
Confidence 9999999999999998776544
No 19
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.88 E-value=1.9e-22 Score=148.49 Aligned_cols=145 Identities=18% Similarity=0.206 Sum_probs=115.1
Q ss_pred cCcHHHHHHHHHHHHHHhh--cCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCc
Q psy8447 12 LSFRQEVETLCKIFKKLLN--SSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVT 89 (229)
Q Consensus 12 ~~~~~~i~~l~~~f~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~ 89 (229)
.+|++++..+++.|..++. +++|. |+..+|..+++.++..++
T Consensus 2 qLt~eqi~elre~F~~fD~~~d~dG~------------------------------------I~~~El~~~lr~lG~~~t 45 (159)
T 3i5g_C 2 QLTKDEIEEVREVFDLFDFWDGRDGD------------------------------------VDAAKVGDLLRCLGMNPT 45 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSC------------------------------------EEGGGHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCCCCCCe------------------------------------ECHHHHHHHHHHcCCCCC
Confidence 4677788888888887775 34444 888899999998887777
Q ss_pred HHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc---CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCC
Q psy8447 90 EEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR---GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDED 166 (229)
Q Consensus 90 ~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~---~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~ 166 (229)
..+ +..++. .+.+++|.|+|.+|+.++..... ....+.++.+|+.||.+++|+|+.+||++++..++...
T Consensus 46 ~~e-l~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~l----- 118 (159)
T 3i5g_C 46 EAQ-VHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERI----- 118 (159)
T ss_dssp HHH-HHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCC-----
T ss_pred HHH-HHHHHc-ccccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCC-----
Confidence 766 455443 46778999999999999877654 34567899999999999999999999999998875432
Q ss_pred ChHHHHHHHHHHHHHcCC--CCCCcccHHHHHHHHhcCh
Q psy8447 167 PDEGVRDLVELALRKMDY--DKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 167 ~~~~~~~~~~~~~~~~d~--~~dg~Is~~ef~~~~~~~~ 203 (229)
+++. +..+++.+|. |+||.|+|+||+++|+..|
T Consensus 119 s~~e----~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~p 153 (159)
T 3i5g_C 119 TEDQ----CNDIFTFCDIREDIDGNIKYEDLMKKVMAGP 153 (159)
T ss_dssp CHHH----HHHHHHHTTCCCCSSCCEEHHHHHHHHHHCS
T ss_pred CHHH----HHHHHHHhCcCCCCCCeEeHHHHHHHHHCCC
Confidence 4433 6778999885 8899999999999998765
No 20
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.88 E-value=4.4e-22 Score=145.73 Aligned_cols=122 Identities=19% Similarity=0.307 Sum_probs=105.3
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccC-----ChHHHHHHHHHHhcCCCCCccc
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-----TNEELIKFTFLIYDLNNDGFIT 146 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-----~~~~~~~~~F~~~D~~~~G~I~ 146 (229)
|+..+|..++..++..++..+ +..+|+.+|.+++|.|+|.||+.++...... .....++.+|+.+|.+++|+|+
T Consensus 31 i~~~e~~~~l~~~~~~~~~~~-~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~ 109 (158)
T 2jnf_A 31 VSTDQIGIILEVLGIQQTKST-IRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYIS 109 (158)
T ss_dssp EEHHHHHHHHHHTTCSCSHHH-HHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEE
T ss_pred CcHHHHHHHHHHhCCCCCHHH-HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEc
Confidence 999999999999877666655 7899999999999999999999999887654 4556899999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 147 REEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 147 ~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
.+||..++..++... +++ .+..++..+|.+++|.|+|+||+.++...|
T Consensus 110 ~~el~~~l~~~g~~~-----~~~----~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 157 (158)
T 2jnf_A 110 TDVMREILAELDETL-----SSE----DLDAMIDEIDADGSGTVDFEEFMGVMTGGD 157 (158)
T ss_dssp HHHHHHHHHHHCTTC-----CHH----HHHHHHHHHCSSCCSEECSHHHHHHTSSCC
T ss_pred HHHHHHHHHHhCCcC-----CHH----HHHHHHHHhCCCCCCcEeHHHHHHHHhccC
Confidence 999999998875322 332 377899999999999999999999998765
No 21
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.88 E-value=6.9e-22 Score=150.31 Aligned_cols=164 Identities=23% Similarity=0.425 Sum_probs=135.0
Q ss_pred hhcCCChhHHHHHHhccCccCCC-CCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCCh
Q psy8447 48 QVSGLPPSNVTERYKGFSPFSFQ-GLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 126 (229)
Q Consensus 48 ~~~~l~~~~~~~l~~~f~~~d~~-~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 126 (229)
..+.++..++..++..|+..+.+ .|+..+|..++..++........+..+|..+|.+++|.|++.||+.++..+.....
T Consensus 7 ~~t~~~~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~ 86 (198)
T 2r2i_A 7 AVEELSATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKV 86 (198)
T ss_dssp HHHHHHTSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCH
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCch
Confidence 44556667788888888876333 49999999999987765555566899999999999999999999999999888888
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcC-CCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHH
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLL 205 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~ 205 (229)
.+.++.+|+.||.|++|+|+.+||..++..++... .....+ .++.+..+|+.+|.+++|.|+++||+.++...|.+
T Consensus 87 ~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~---~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~ 163 (198)
T 2r2i_A 87 DQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMT---AEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVL 163 (198)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCC---HHHHHHHHHHHHCTTCSSEECHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhh---HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCHHH
Confidence 89999999999999999999999999998764211 001112 23457889999999999999999999999999999
Q ss_pred HHHhcccCC
Q psy8447 206 LEAFGQCLP 214 (229)
Q Consensus 206 ~~~~~~~~~ 214 (229)
.++++....
T Consensus 164 ~~~~~~~~~ 172 (198)
T 2r2i_A 164 LDILTRSLD 172 (198)
T ss_dssp HHHHHSTTC
T ss_pred HHHHhcccc
Confidence 998886543
No 22
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.8e-23 Score=152.77 Aligned_cols=142 Identities=20% Similarity=0.281 Sum_probs=113.5
Q ss_pred CCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCC-h
Q psy8447 51 GLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGT-N 126 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~-~ 126 (229)
+|+++++..+.+.|..+|.++ |+..+|..++..++..++..+ +..++..+|.+++|.|+|.||+.++....... .
T Consensus 4 ~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~-~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~ 82 (176)
T 2lhi_A 4 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAE-VNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS 82 (176)
T ss_dssp CCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHH-HHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHH-HHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence 345555555555554444432 999999999999988777766 78899999999999999999999887766543 4
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
.+.+..+|+.||.|++|+|+.+||..++..++.. .+++. ++.+++.+| |+||.|+|+||+++|.+..
T Consensus 83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~-----~~~~e----i~~l~~~~d-d~dG~I~~~EF~~~m~k~~ 149 (176)
T 2lhi_A 83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK-----LTDAE----VDDMLREVS-DGSGEINIQQFAALLSKGS 149 (176)
T ss_dssp HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCC-----CCHHH----HHHHHHHHH-TTSSCBCTTHHHHHHTCCS
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcc-----cchHH----HHHHHHhhc-CCCCeEeHHHHHHHHHhcC
Confidence 6789999999999999999999999999876432 34443 677888888 9999999999999997643
No 23
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.88 E-value=3.4e-22 Score=144.36 Aligned_cols=119 Identities=16% Similarity=0.229 Sum_probs=100.5
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+|..++..++..++..+ +..++..+|.+++|.|+|+||+.++..... ..+.+.++.+|+.||.+++|+|+.+|+
T Consensus 23 I~~~el~~~l~~~g~~~~~~~-~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el 101 (143)
T 2obh_A 23 IDVKELKVAMRALGFEPKKEE-IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNL 101 (143)
T ss_dssp EEGGGHHHHHHHTTCCCCHHH-HHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHH
T ss_pred CcHHHHHHHHHHcCCCCCHHH-HHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 999999999999887666666 788999999999999999999998876432 234568899999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..++..++.. .+++ .+..+++.+|.|+||.|+|+||+.++.
T Consensus 102 ~~~l~~~g~~-----~~~~----~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 102 KRVAKELGEN-----LTDE----ELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHTTCC-----CCHH----HHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHhCCC-----CCHH----HHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 9999877533 2333 377899999999999999999999875
No 24
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.88 E-value=1.1e-21 Score=145.24 Aligned_cols=147 Identities=18% Similarity=0.269 Sum_probs=115.3
Q ss_pred hcCCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccC-
Q psy8447 49 VSGLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG- 124 (229)
Q Consensus 49 ~~~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~- 124 (229)
..++++.++..+...|..+|.++ |+..+|..++..++..++..+ +..+|..+|.+++|.|+|+||+.++......
T Consensus 19 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~-~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~ 97 (169)
T 3qrx_A 19 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEE-IKKMISEIDKDGSGTIDFEEFLTMMTAKMGER 97 (169)
T ss_dssp -CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHH-HHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHH-HHHHHHHhcCCCCCcCCHHHHHHHHHHHhccc
Confidence 34566666666666666655543 999999999999887666665 7999999999999999999999998865432
Q ss_pred ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChH
Q psy8447 125 TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 125 ~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
...+.+..+|+.+|.+++|+|+.+||..++..++.. .+++ .+..++..+|.++||.|+|+||+.++...|.
T Consensus 98 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~-----~~~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~ 168 (169)
T 3qrx_A 98 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGEN-----LTEE----ELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168 (169)
T ss_dssp HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC-----CCHH----HHHHHHHHHCCSSSSCBCHHHHHHHHC----
T ss_pred CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC-----CCHH----HHHHHHHHhCCCCCCCEeHHHHHHHHHhccC
Confidence 345688999999999999999999999999877532 2333 3778999999999999999999999998775
Q ss_pred H
Q psy8447 205 L 205 (229)
Q Consensus 205 ~ 205 (229)
+
T Consensus 169 ~ 169 (169)
T 3qrx_A 169 F 169 (169)
T ss_dssp -
T ss_pred C
Confidence 3
No 25
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.88 E-value=1.3e-21 Score=141.90 Aligned_cols=120 Identities=19% Similarity=0.324 Sum_probs=101.6
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+|..++..++..++..+ +..+|..+|.+++|.|+|.||+.++..... ....+.+..+|+.+|.+++|+|+.+||
T Consensus 27 i~~~el~~~l~~~g~~~~~~~-~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el 105 (148)
T 1exr_A 27 ITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAEL 105 (148)
T ss_dssp ECHHHHHHHHHHHTCCCCHHH-HHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHH
T ss_pred CcHHHHHHHHHHcCCCCCHHH-HHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHH
Confidence 999999999999887666665 789999999999999999999998876532 244567899999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
..++..++.. .+++ .+..++..+|.+++|.|+|+||+.++..
T Consensus 106 ~~~l~~~g~~-----~~~~----~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 106 RHVMTNLGEK-----LTDD----EVDEMIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp HHHHHHTTCC-----CCHH----HHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred HHHHHHhCCC-----CCHH----HHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence 9999876532 2333 3778999999999999999999998764
No 26
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.87 E-value=7.9e-22 Score=144.71 Aligned_cols=148 Identities=17% Similarity=0.289 Sum_probs=121.4
Q ss_pred ccCcCcHHHHHHHHHHHHHHhhcC-CCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCC
Q psy8447 9 LLPLSFRQEVETLCKIFKKLLNSS-SNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDL 87 (229)
Q Consensus 9 ~~~~~~~~~i~~l~~~f~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~ 87 (229)
....++++++..++..|..++.++ +|. |+..+|..++..++..
T Consensus 8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~------------------------------------i~~~e~~~~l~~~~~~ 51 (161)
T 1dtl_A 8 AVEQLTEEQKNEFKAAFDIFVLGAEDGS------------------------------------ISTKELGKVMRMLGQN 51 (161)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTTTCGGGS------------------------------------BCHHHHHHHHHHTTCC
T ss_pred HHhhCCHHHHHHHHHHHHHHcCCCCCCc------------------------------------CcHHHHHHHHHHcCCC
Confidence 346677777888888887777766 665 9999999999998776
Q ss_pred CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc----CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCC
Q psy8447 88 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR----GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQ 163 (229)
Q Consensus 88 ~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~----~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~ 163 (229)
++..+ +..+|+.+|.+++|.|+|.||+.++..... ......++.+|+.+|.+++|+|+.+||..++..++..
T Consensus 52 ~~~~~-~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--- 127 (161)
T 1dtl_A 52 PTPEE-LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGET--- 127 (161)
T ss_dssp CCHHH-HHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--C---
T ss_pred CCHHH-HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC---
Confidence 66665 789999999999999999999999988763 4567789999999999999999999999998765422
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 164 DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
.+++ .+..++..+|.+++|.|+|+||..++...
T Consensus 128 --~~~~----~~~~~~~~~D~d~dg~i~~~eF~~~~~~~ 160 (161)
T 1dtl_A 128 --ITED----DIEELMKDGDKNNDGRIDYDEFLEFMKGV 160 (161)
T ss_dssp --CCHH----HHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred --CCHH----HHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence 2333 37889999999999999999999988653
No 27
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.87 E-value=8.9e-22 Score=151.35 Aligned_cols=162 Identities=18% Similarity=0.329 Sum_probs=125.6
Q ss_pred hcCCChhHHHHHHhccCccCCC-CCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChH
Q psy8447 49 VSGLPPSNVTERYKGFSPFSFQ-GLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE 127 (229)
Q Consensus 49 ~~~l~~~~~~~l~~~f~~~d~~-~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~ 127 (229)
.++++..++..++..|+..+.+ .|+..+|..++..++..+.....+..+|..+|.+++|.|+|.||+.++..+......
T Consensus 13 ~t~ls~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~ 92 (211)
T 2ggz_A 13 QKAVPTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKME 92 (211)
T ss_dssp -----------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHH
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchH
Confidence 4567888888888888765333 499999999999876655555668999999999999999999999999988877888
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLE 207 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~ 207 (229)
+.++.+|+.||.|++|+|+.+||..++..++........ ..++.+..+|+.+|.+++|.|+|+||+.++...|.+.+
T Consensus 93 ~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~---~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~ 169 (211)
T 2ggz_A 93 QKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTL---SPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLE 169 (211)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSC---THHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTHH
T ss_pred HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccc---cHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHHH
Confidence 899999999999999999999999999887531110111 22345788999999999999999999999999999988
Q ss_pred HhcccC
Q psy8447 208 AFGQCL 213 (229)
Q Consensus 208 ~~~~~~ 213 (229)
++....
T Consensus 170 ~~~~~~ 175 (211)
T 2ggz_A 170 IVYKSF 175 (211)
T ss_dssp HHHHHS
T ss_pred HHhccC
Confidence 888543
No 28
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.87 E-value=2.1e-22 Score=153.39 Aligned_cols=143 Identities=16% Similarity=0.254 Sum_probs=107.5
Q ss_pred CChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHH
Q psy8447 52 LPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE 128 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 128 (229)
++..++..+...|..+|.++ |+..+|..++..++...+..+ +..+|+.+|.+++|.|+|.||+.++.........+
T Consensus 51 l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~-~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~ 129 (197)
T 3pm8_A 51 LCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPD-IHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKE 129 (197)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHH-HHHHHHC-------CEEHHHHHHTTCCHHHHCSHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHH-HHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHH
Confidence 56677777777777666543 999999999999876555555 79999999999999999999999887776667778
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 129 LIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 129 ~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
.++.+|+.||.|++|+|+.+||..++..++. .....++.+..++..+|.|+||.|+|+||..+|.+.
T Consensus 130 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~-------~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 130 VCLIPFKFFDIDGNGKISVEELKRIFGRDDI-------ENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHC-----------CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHhccc-------CCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence 9999999999999999999999999976521 011233458889999999999999999999998764
No 29
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.87 E-value=4.4e-21 Score=140.63 Aligned_cols=140 Identities=19% Similarity=0.267 Sum_probs=113.1
Q ss_pred CChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc-cCChH
Q psy8447 52 LPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNE 127 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~-~~~~~ 127 (229)
+++.++..+...|..+|.++ |+..+|..++..++..++..+ +..+|..+|.+++|.|+|+||+.++.... .....
T Consensus 17 l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~-~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 95 (161)
T 3fwb_A 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE-ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPL 95 (161)
T ss_dssp SCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHH-HHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHH-HHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcH
Confidence 44445555554444444332 999999999999877666666 79999999999999999999999998654 44667
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
..++.+|+.+|.+++|+|+.+||..++..++... +++ .+..++..+|.+++|.|+|+||+.++..
T Consensus 96 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-----~~~----~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 96 DEIKRAFQLFDDDHTGKISIKNLRRVAKELGETL-----TDE----ELRAMIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC-----CHH----HHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 8899999999999999999999999998875322 333 3788999999999999999999998864
No 30
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.87 E-value=2.1e-21 Score=148.06 Aligned_cols=161 Identities=20% Similarity=0.315 Sum_probs=132.6
Q ss_pred CCCCchhhhHhhcCCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHH
Q psy8447 38 PISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEW 114 (229)
Q Consensus 38 ~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef 114 (229)
....++..+.+.+.+++.++..+...|..+|.++ |+..+|..+ ..++.... +..+|..+|.+++|.|+|+||
T Consensus 9 l~~~~~~~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~----~~~l~~~~D~d~dg~i~~~EF 83 (202)
T 2bec_A 9 AVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL----GDRIIESFFPDGSQRVDFPGF 83 (202)
T ss_dssp --CCSTTTHHHHHCCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT----HHHHHHTTSCSSCCCCCHHHH
T ss_pred cCHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc----HHHHHHHhCCCCCCcCcHHHH
Confidence 4567788899999999999988888888777543 999999998 66554333 788999999999999999999
Q ss_pred HHHHHhhcc-----------------CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH-hhcCCCCCCChHHHHHHHH
Q psy8447 115 VLGLSCFLR-----------------GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS-LISHPQDEDPDEGVRDLVE 176 (229)
Q Consensus 115 ~~~~~~~~~-----------------~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 176 (229)
+.++..... ....+.++.+|+.||.|++|+|+.+||..++..+ + ...+++.+..++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g-----~~~~~~~~~~~~~ 158 (202)
T 2bec_A 84 VRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVG-----VQVTEEQLENIAD 158 (202)
T ss_dssp HHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCC-----SCCCHHHHHHHHH
T ss_pred HHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcC-----CCCCHHHHHHHHH
Confidence 999988763 4556789999999999999999999999999876 3 2346667777777
Q ss_pred HHHHHcCCCCCCcccHHHHHHHHhcChHHHHH
Q psy8447 177 LALRKMDYDKDGKISFQDFQQSVTDEPLLLEA 208 (229)
Q Consensus 177 ~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~ 208 (229)
.+|+.+|.|+||.|+|+||+.++.....-...
T Consensus 159 ~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~ 190 (202)
T 2bec_A 159 RTVQEADEDGDGAVSFVEFTKSLEKMDVEQKM 190 (202)
T ss_dssp HHHHHHCSSCSSSEEHHHHHHTTTTSCHHHHT
T ss_pred HHHHHcCCCCCCcCcHHHHHHHHHHhCccceE
Confidence 77778999999999999999999877554333
No 31
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.87 E-value=9.1e-22 Score=143.81 Aligned_cols=147 Identities=16% Similarity=0.230 Sum_probs=122.3
Q ss_pred CcCcHHHHHHHHHHHHHHhh--cCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCC
Q psy8447 11 PLSFRQEVETLCKIFKKLLN--SSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLV 88 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~ 88 (229)
+.+|++++..++..|..++. +++|. |+..+|..++..++..+
T Consensus 1 ~~ls~~~~~~l~~~F~~~D~~~d~~G~------------------------------------i~~~el~~~l~~~g~~~ 44 (156)
T 1wdc_C 1 PKLSQDEIDDLKDVFELFDFWDGRDGA------------------------------------VDAFKLGDVCRCLGINP 44 (156)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTCSSSC------------------------------------EEGGGHHHHHHHTTCCC
T ss_pred CCCCHHHHHHHHHHHHHHccCCCCCCC------------------------------------CcHHHHHHHHHHcCCCC
Confidence 35778888888888888887 77766 88889999998887766
Q ss_pred cHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc--CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCC
Q psy8447 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR--GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDED 166 (229)
Q Consensus 89 ~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~--~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~ 166 (229)
+..+ +..+ ..+|.+++|.|+|.||+.++..... ......++.+|+.||.+++|+|+.+||..++..++.. .
T Consensus 45 ~~~~-~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~-----~ 117 (156)
T 1wdc_C 45 RNED-VFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER-----L 117 (156)
T ss_dssp CHHH-HHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSC-----C
T ss_pred CHHH-HHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCC-----C
Confidence 6655 6777 8899999999999999999988765 5667889999999999999999999999999877432 2
Q ss_pred ChHHHHHHHHHHHHH--cCCCCCCcccHHHHHHHHhcChH
Q psy8447 167 PDEGVRDLVELALRK--MDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 167 ~~~~~~~~~~~~~~~--~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
+++ .+..+++. +|.+++|.|+|+||+.++...|.
T Consensus 118 ~~~----~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~ 153 (156)
T 1wdc_C 118 SDE----DVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPY 153 (156)
T ss_dssp CHH----HHHHHHHHHTCCCCTTSEEEHHHHHHHHHHCSC
T ss_pred CHH----HHHHHHHHhCCCCCCCCcEeHHHHHHHHhcCCC
Confidence 333 37789999 99999999999999999987653
No 32
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.86 E-value=2.8e-21 Score=146.38 Aligned_cols=143 Identities=21% Similarity=0.289 Sum_probs=116.4
Q ss_pred CCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChH
Q psy8447 51 GLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE 127 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~ 127 (229)
.+++.++..+...|..+|.++ |+..+|..++..++...+ ..+..+|..+|.+++|.|+|+||+.++.... ....
T Consensus 45 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~--~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~ 121 (191)
T 3k21_A 45 QSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP--YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSK 121 (191)
T ss_dssp HCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC--TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCH
T ss_pred HCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH--HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccH
Confidence 357777777777777776653 999999999999877666 4478999999999999999999999886554 3567
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
+.++.+|+.+|.|++|+|+.+||..++..... ....+++..+ .+..+|..+|.|+||.|+|+||+.++.
T Consensus 122 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~---~~~l~~~~~~-~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 122 KLIYCAFRVFDVDNDGEITTAELAHILYNGNK---KGNITQRDVN-RVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSS---CSCCCHHHHH-HHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCC---CCCCCHhHHH-HHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 78999999999999999999999999976321 2233443322 478899999999999999999999875
No 33
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.86 E-value=4e-21 Score=138.62 Aligned_cols=143 Identities=17% Similarity=0.244 Sum_probs=116.0
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcH
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTE 90 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~ 90 (229)
+.++++++..++..|..++.+++|. |+..+|..++..++...+.
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~~~~G~------------------------------------i~~~e~~~~l~~~~~~~~~ 46 (147)
T 4ds7_A 3 QNLTEEQIAEFKEAFALFDKDNSGS------------------------------------ISASELATVMRSLGLSPSE 46 (147)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSE------------------------------------EEHHHHHHHHHHTTCCCCH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCC------------------------------------cCHHHHHHHHHHhCCCCCH
Confidence 3466666666666666666655554 9999999999988776666
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChH
Q psy8447 91 EILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDE 169 (229)
Q Consensus 91 ~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~ 169 (229)
.+ +..+|..+|.+++|.|+|+||+.++...... ...+.+..+|+.+|.+++|+|+.+||..++..++... +++
T Consensus 47 ~~-~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~-----~~~ 120 (147)
T 4ds7_A 47 AE-VADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKL-----TDA 120 (147)
T ss_dssp HH-HHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC-----CHH
T ss_pred HH-HHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCC-----CHH
Confidence 65 7899999999999999999999999876443 4457899999999999999999999999998775322 333
Q ss_pred HHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 170 GVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 170 ~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
.+..++..+| +++|.|+|+||+.++.
T Consensus 121 ----~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 121 ----EVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp ----HHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred ----HHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 3777999999 9999999999999875
No 34
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.86 E-value=2.7e-21 Score=138.98 Aligned_cols=118 Identities=16% Similarity=0.252 Sum_probs=101.4
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc-cCChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~-~~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+|..++..++..++..+ +..+|+.+|.+++|.|+|.||+.++.... .....+.++.+|+.+|.+++|+|+.+||
T Consensus 23 i~~~el~~~l~~~~~~~~~~~-~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el 101 (142)
T 2bl0_C 23 ITKEGLQTVLKQFGVRVEPAA-FNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAAL 101 (142)
T ss_dssp EEHHHHHHHHHHHTCCCCHHH-HHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHH
T ss_pred CcHHHHHHHHHHhCCCCCHHH-HHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHH
Confidence 999999999999887666665 78999999999999999999999998743 4566788999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..++..++.. .+++ .+..++..+| +++|.|+|+||+.++.
T Consensus 102 ~~~l~~~g~~-----~~~~----~~~~~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 102 QDALLNLGDR-----LKPH----EFAEFLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHSSSC-----CCHH----HHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHcCCC-----CCHH----HHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence 9999876432 2333 3788999999 9999999999998764
No 35
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.85 E-value=3.5e-20 Score=133.94 Aligned_cols=118 Identities=14% Similarity=0.171 Sum_probs=100.5
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHH---ccCCCCceeHHHHHHHHHhh---ccCChHHHHHHHHHHhcCCCCCcc
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAF---DRLCDGVIHLDEWVLGLSCF---LRGTNEELIKFTFLIYDLNNDGFI 145 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~---d~~~~g~I~~~ef~~~~~~~---~~~~~~~~~~~~F~~~D~~~~G~I 145 (229)
|+..+|..++..++..++..+ +..+|..+ |.++ |.|+|.||+.++... ........++.+|+.+|.+++|+|
T Consensus 25 i~~~el~~~l~~~~~~~~~~~-~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i 102 (149)
T 2mys_C 25 ITASQVGDIARALGQNPTNAE-INKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTV 102 (149)
T ss_pred CcHHHHHHHHHHhCCCCCHHH-HHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceE
Confidence 999999999999877666655 78899999 9999 999999999999886 234566789999999999999999
Q ss_pred cHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 146 TREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 146 ~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
+.+||..++..++... +++ .+..++.. |.+++|.|+|+||+.++..
T Consensus 103 ~~~el~~~l~~~g~~~-----~~~----~~~~~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 103 MGAELRHVLATLGEKM-----TEE----EVEELMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred cHHHHHHHHHHhCCCC-----CHH----HHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence 9999999998875322 232 37778999 9999999999999998864
No 36
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.85 E-value=7e-21 Score=142.17 Aligned_cols=122 Identities=21% Similarity=0.357 Sum_probs=101.7
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+|..++..++..++..+ +..+|..+|.+++|.|+|.||+.++..... ......++.+|+.+|.+++|+|+.+||
T Consensus 28 i~~~e~~~~l~~~~~~~~~~~-~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~ 106 (179)
T 2f2o_A 28 ITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 106 (179)
T ss_dssp BCHHHHHHHHHHTTCCCCHHH-HHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHH
T ss_pred CcHHHHHHHHHHcCCCCCHHH-HHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 999999999999877666665 789999999999999999999999877643 234567899999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++..++.. .+++ .+..++..+|.+++|.|+|+||+.++...+
T Consensus 107 ~~~l~~~g~~-----~~~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 150 (179)
T 2f2o_A 107 RHVMTNLGEK-----LTDE----EVDEMIREADIDGDGQVNYEEFVQMMTAKG 150 (179)
T ss_dssp HHHHHHC--C-----CCHH----HHHHHHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred HHHHHHhCCC-----CCHH----HHHHHHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence 9999876432 2333 377899999999999999999999998654
No 37
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.85 E-value=3.5e-21 Score=141.17 Aligned_cols=145 Identities=17% Similarity=0.191 Sum_probs=118.3
Q ss_pred cCcHHHHHHHHHHHHHHh--hcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCc
Q psy8447 12 LSFRQEVETLCKIFKKLL--NSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVT 89 (229)
Q Consensus 12 ~~~~~~i~~l~~~f~~l~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~ 89 (229)
.+|++++..+++.|..++ .+++|. |+..+|..++..++..++
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~------------------------------------i~~~el~~~l~~lg~~~~ 45 (159)
T 2ovk_C 2 QLTKDEIEEVREVFDLFDFWDGRDGD------------------------------------VDAAKVGDLLRCLGMNPT 45 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSE------------------------------------EEGGGHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCC------------------------------------CcHHHHHHHHHHcCCCCC
Confidence 467778888888888877 766665 888899999998877666
Q ss_pred HHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc---cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCC
Q psy8447 90 EEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL---RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDED 166 (229)
Q Consensus 90 ~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~---~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~ 166 (229)
..+ +..++..+|.+ +|.|+|+||+.++.... .....+.++.+|+.||.+++|+|+.+||..++..++.. .
T Consensus 46 ~~~-~~~l~~~~d~~-~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~-----~ 118 (159)
T 2ovk_C 46 EAQ-VHQHGGTKKMG-EKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGER-----I 118 (159)
T ss_dssp HHH-HHHTTCCSSTT-SCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSC-----C
T ss_pred HHH-HHHHHHHhcCC-CCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC-----C
Confidence 666 68888888874 69999999999985432 23467889999999999999999999999999987532 2
Q ss_pred ChHHHHHHHHHHHH--HcCCCCCCcccHHHHHHHHhcCh
Q psy8447 167 PDEGVRDLVELALR--KMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 167 ~~~~~~~~~~~~~~--~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
+++ .+..++. .+|.+++|.|+|+||+.++...|
T Consensus 119 ~~~----~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 153 (159)
T 2ovk_C 119 TED----QCNDIFTFCDIREDIDGNIKYEDLMKKVMAGP 153 (159)
T ss_dssp CHH----HHHHHHHHTTCCCCTTCCEEHHHHHHHHHHCS
T ss_pred CHH----HHHHHHHHhcCCCCCCCcEeHHHHHHHHhcCC
Confidence 333 3778999 89999999999999999998765
No 38
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.85 E-value=2.1e-21 Score=143.22 Aligned_cols=120 Identities=19% Similarity=0.265 Sum_probs=97.5
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMF 151 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~ 151 (229)
|+..+|..++..++..++..+ +..+|+.+|.+++|.|+|.||+.++.........+.+..+|+.+|.+++|+|+.+||.
T Consensus 44 i~~~e~~~~l~~~~~~~~~~~-~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~ 122 (166)
T 2aao_A 44 ITFEELKAGLKRVGANLKESE-ILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQ 122 (166)
T ss_dssp BCHHHHHHHGGGGTCCCCHHH-HHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred EeHHHHHHHHHHhCCCCCHHH-HHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 999999999999877666655 7899999999999999999999998765443445789999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 152 QLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 152 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
.++..++. + .+.+..++..+|.+++|.|+|+||..++...+
T Consensus 123 ~~l~~~~~-------~----~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~ 163 (166)
T 2aao_A 123 QACEEFGV-------E----DVRIEELMRDVDQDNDGRIDYNEFVAMMQKGS 163 (166)
T ss_dssp HHTCC-------------------CCHHHHHCTTCSSSBCHHHHHHHHC---
T ss_pred HHHHHcCC-------C----HHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence 99876531 1 12367799999999999999999999987654
No 39
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.84 E-value=6.1e-21 Score=139.51 Aligned_cols=117 Identities=11% Similarity=0.253 Sum_probs=96.4
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+|..+++.++..++..+ +.. +..+.+|.|+|.+|+.++...... .+++.++.+|+.||.+++|+|+.+||
T Consensus 33 I~~~El~~~l~~lg~~~~~~~-~~~----~~~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el 107 (153)
T 3i5g_B 33 IGMEDLKDMFSSLGRVPPDDE-LNA----MLKECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYL 107 (153)
T ss_dssp CCHHHHHHHHHHTTSCCCHHH-HHH----HHHTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHHHHTTCSSCSSCCCHHHH
T ss_pred EcHHHHHHHHHHcCCCccHHH-HHH----HHHhccCCccHHHHHHHHHhhhcccccHHHHHHHHhccccCCCCeEeHHHH
Confidence 999999999999988777665 333 345678899999999998876654 46788999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
+.++..++. ..+++. ++.+++.+|.+ ||.|+|+||+++|...+
T Consensus 108 ~~~l~~~g~-----~ls~~e----i~~~~~~~D~~-dG~I~y~EF~~~m~~~~ 150 (153)
T 3i5g_B 108 KDLLENMGD-----NFSKEE----IKNVWKDAPLK-NKQFNYNKMVDIKGKAE 150 (153)
T ss_dssp HHHHHSSSS-----CCCHHH----HHHHHTTCCEE-TTEECHHHHHHHHHCSC
T ss_pred HHHHHHcCC-----cCCHHH----HHHHHHHhCCC-cCEEcHHHHHHHhcCCC
Confidence 999987653 334443 67799999987 99999999999997653
No 40
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.84 E-value=1.2e-19 Score=132.07 Aligned_cols=122 Identities=30% Similarity=0.506 Sum_probs=99.4
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+| ..+..++... .+..+|..+|.+++|.|+|.||+.++..... ....+.++.+|+.+|.+++|+|+.+||
T Consensus 23 i~~~el-~~l~~~~~~~----~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~ 97 (155)
T 3ll8_B 23 LSVEEF-MSLPELQQNP----LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGEL 97 (155)
T ss_dssp BCHHHH-TTSGGGTTCT----THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHH
T ss_pred EcHHHH-HHhhccccch----HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 888888 4444443222 3788999999999999999999999988754 466789999999999999999999999
Q ss_pred HHHHHHH-hhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 151 FQLLRNS-LISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 151 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++..+ +.. .+++.+...+..+|..+|.+++|.|+|+||..++....
T Consensus 98 ~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 98 FQVLKMMVGNN-----LKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHHHHGGG-----SCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHHhccC-----CCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 9999884 332 35556666677777779999999999999999998653
No 41
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.84 E-value=8.5e-21 Score=139.21 Aligned_cols=141 Identities=24% Similarity=0.355 Sum_probs=111.4
Q ss_pred CCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCC--
Q psy8447 51 GLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGT-- 125 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~-- 125 (229)
.+++.++..+...|..+|.++ |+..+|..++..++..++... +..+|..+|.+++|.|+|.||+.++.......
T Consensus 13 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~-~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~ 91 (162)
T 1top_A 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEE-LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAK 91 (162)
T ss_dssp HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHH-HHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHH-HHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccc
Confidence 345555555555555554432 899999999998877666655 78999999999999999999999988764321
Q ss_pred --hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 126 --NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 126 --~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
....++.+|+.+|.+++|+|+.+||..++..++. ..+++ .+..++..+|.+++|.|+|+||+.++..
T Consensus 92 ~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~-----~~~~~----~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 160 (162)
T 1top_A 92 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGE-----HVTEE----DIEDLMKDSDKNNDGRIDFDEFLKMMEG 160 (162)
T ss_dssp HHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC-----CCCHH----HHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-----CCCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 4567899999999999999999999999987642 22333 3778999999999999999999998865
No 42
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.84 E-value=2.9e-20 Score=140.63 Aligned_cols=143 Identities=17% Similarity=0.172 Sum_probs=107.5
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHH-----HHHhhhcCC
Q psy8447 13 SFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFR-----ELLHNTFDL 87 (229)
Q Consensus 13 ~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~-----~~l~~~~~~ 87 (229)
++++++..++..|..++.+++|. |+..+|. .++..++..
T Consensus 14 ~s~~~~~~l~~~F~~~D~d~~G~------------------------------------i~~~El~~~~~~~~l~~~g~~ 57 (195)
T 1qv0_A 14 DNPRWIKRHKHMFDFLDINGNGK------------------------------------ITLDEIVSKASDDICAKLEAT 57 (195)
T ss_dssp TCHHHHHHHHHHHHHHCTTCSSC------------------------------------BCHHHHHHHHHHTHHHHTTCC
T ss_pred CCHHHHHHHHHHHhHcCCCCCCc------------------------------------CcHHHHHHHHHHHHHHHcCCC
Confidence 47777777777777777766665 8889998 566666654
Q ss_pred CcHHH----HHHHHHHHHccCCCCceeHHHHHHHHHhhccC-------ChHHHHH----HHHHHhcCCCCCcccHHHHHH
Q psy8447 88 VTEEI----LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-------TNEELIK----FTFLIYDLNNDGFITREEMFQ 152 (229)
Q Consensus 88 ~~~~~----~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-------~~~~~~~----~~F~~~D~~~~G~I~~~e~~~ 152 (229)
++..+ .+..+|..+|.+++|.|+|+||+.++...... ...+.++ .+|+.||.|++|+|+.+||..
T Consensus 58 ~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~ 137 (195)
T 1qv0_A 58 PEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKA 137 (195)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHH
Confidence 44432 47889999999999999999999988765431 1112233 899999999999999999999
Q ss_pred HHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 153 LLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 153 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
++..++.. .+++ .+..++..+|.|++|.|+|+||+.++.
T Consensus 138 ~l~~~g~~-----~~~~----~~~~~~~~~D~d~dg~i~~~eF~~~~~ 176 (195)
T 1qv0_A 138 YGKISGIS-----PSQE----DCEATFRHCDLDNAGDLDVDEMTRQHL 176 (195)
T ss_dssp HHHHHSSC-----CCHH----HHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHhCCC-----CCHH----HHHHHHHHhCCCCCCcCCHHHHHHHHH
Confidence 99887532 2333 378899999999999999999999775
No 43
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.83 E-value=3.1e-20 Score=140.52 Aligned_cols=150 Identities=15% Similarity=0.158 Sum_probs=125.7
Q ss_pred hhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHH
Q psy8447 54 PSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFT 133 (229)
Q Consensus 54 ~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~ 133 (229)
..++..++..|+....+.|+..+|..++...+...+..+ +..+|+.+|.+++|.|+|+||+.++... ..++.+
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~-~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~ 98 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLAT-TEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREG 98 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHH-HHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHH-HHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHH
Confidence 466778888887766666999999999966555455555 7899999999999999999999988754 678999
Q ss_pred HHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccC
Q psy8447 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCL 213 (229)
Q Consensus 134 F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~ 213 (229)
|+.+|.+++|+|+.+||..++..++.. .+++ .+..++..+|.|++|.|+|+||..++...+.+.+.|....
T Consensus 99 F~~~D~d~~G~i~~~e~~~~l~~~g~~-----~~~~----~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D 169 (191)
T 1y1x_A 99 FRKRDSSGDGRLDSNEVRAALLSSGYQ-----VSEQ----TFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYD 169 (191)
T ss_dssp HHHHCTTSSSCBCHHHHHHHHHTTSCC-----CCHH----HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCCCCeEcHHHHHHHHHHhCCC-----CCHH----HHHHHHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999876432 2332 3778999999999999999999999999999999999988
Q ss_pred CChHHH
Q psy8447 214 PSDAAR 219 (229)
Q Consensus 214 ~~~~~~ 219 (229)
....|.
T Consensus 170 ~d~dG~ 175 (191)
T 1y1x_A 170 RERTGQ 175 (191)
T ss_dssp TTCCSE
T ss_pred cCCCce
Confidence 777665
No 44
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.83 E-value=5.5e-21 Score=137.54 Aligned_cols=137 Identities=20% Similarity=0.315 Sum_probs=106.3
Q ss_pred ChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChHH
Q psy8447 53 PPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNEE 128 (229)
Q Consensus 53 ~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~~ 128 (229)
++.++..+...|..+|.++ |+..+|..++..++..++..+ +..++.. ++|.|+|+||+.++..... ....+
T Consensus 2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~ 76 (143)
T 3j04_B 2 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEY-LEGMMSE----APGPINFTMFLTMFGEKLNGTDPED 76 (143)
T ss_dssp CHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHH-HHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHH-HHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence 3344444444444444332 999999999999887666655 4544443 8899999999999986543 45678
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 129 LIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 129 ~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
.++.+|+.||.+++|+|+.+||..++..++.. .+++ .+..++..+|.+++|.|+|+||+.++...|
T Consensus 77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~-----~~~~----~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 142 (143)
T 3j04_B 77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDR-----FTDE----EVDEMYREAPIDKKGNFNYVEFTRILKHGA 142 (143)
T ss_dssp HHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSC-----CCHH----HHHHHHHHTTCCSSSCCCSTHHHHHHHSSC
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCC-----CCHH----HHHHHHHHcCCCCCCcCcHHHHHHHHhccC
Confidence 89999999999999999999999999876432 2333 378899999999999999999999998765
No 45
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.83 E-value=7.7e-20 Score=135.88 Aligned_cols=120 Identities=16% Similarity=0.171 Sum_probs=97.2
Q ss_pred CCHHHHHH----HHhhhcCCCcHHHH----------HHHHHHHHccCCCCceeHHHHHHHHHhhccCCh--------HHH
Q psy8447 72 LDRVVFRE----LLHNTFDLVTEEIL----------MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN--------EEL 129 (229)
Q Consensus 72 i~~~ef~~----~l~~~~~~~~~~~~----------~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~--------~~~ 129 (229)
|+..+|.. ++..++..++..+. +..+|..+|.+++|.|+++||+.++........ ...
T Consensus 24 i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~ 103 (176)
T 1nya_A 24 LERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPV 103 (176)
T ss_dssp BCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHH
Confidence 77788877 55555555554442 238999999999999999999999988765543 367
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 130 ~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
++.+|+.+|.+++|+|+.+||..++..++ .+++ .+..+|+.+|.+++|.|+|+||..++...
T Consensus 104 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-------~~~~----~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 165 (176)
T 1nya_A 104 VKGIVGMCDKNADGQINADEFAAWLTALG-------MSKA----EAAEAFNQVDTNGNGELSLDELLTAVRDF 165 (176)
T ss_dssp HHHHHHHTCSSCCSEEEHHHHHHHHHHTT-------CCHH----HHHHHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHhC-------CCHH----HHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 89999999999999999999999998764 2332 37889999999999999999999988653
No 46
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.83 E-value=5.5e-20 Score=138.52 Aligned_cols=120 Identities=17% Similarity=0.167 Sum_probs=95.7
Q ss_pred CCHHHHH-----HHHhhhcCCCcHHH----HHHHHHHHHccCCCCceeHHHHHHHHHhhccC-------ChHHHH----H
Q psy8447 72 LDRVVFR-----ELLHNTFDLVTEEI----LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-------TNEELI----K 131 (229)
Q Consensus 72 i~~~ef~-----~~l~~~~~~~~~~~----~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-------~~~~~~----~ 131 (229)
|+..+|. .++..++..++..+ .+..+|+.+|.+++|.|+|+||+.++...... ...+.+ +
T Consensus 33 i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (191)
T 1uhk_A 33 ISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGD 112 (191)
T ss_dssp EEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHH
Confidence 8899998 67777665444442 47889999999999999999999988765331 111223 3
Q ss_pred HHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 132 FTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 132 ~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
.+|+.+|.|++|+|+.+||..++..++.. .+++ .+..++..+|.|++|.|+|+||..++.
T Consensus 113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~-----~~~~----~~~~~~~~~D~d~dG~i~~~eF~~~~~ 172 (191)
T 1uhk_A 113 ALFDIVDKDQNGAITLDEWKAYTKAAGII-----QSSE----DCEETFRVCDIDESGQLDVDEMTRQHL 172 (191)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHHTSC-----CSHH----HHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHhCCC-----CCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 89999999999999999999999887532 2332 378899999999999999999999876
No 47
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.83 E-value=3e-21 Score=139.74 Aligned_cols=121 Identities=16% Similarity=0.177 Sum_probs=101.7
Q ss_pred CCCHHHHHHHHhhhcCCCcHHHHHHHHHHHH-ccCCCCceeHHHHHHHHHhh------ccCChHHHHHHHHHHhcCCCCC
Q psy8447 71 GLDRVVFRELLHNTFDLVTEEILMERIFCAF-DRLCDGVIHLDEWVLGLSCF------LRGTNEELIKFTFLIYDLNNDG 143 (229)
Q Consensus 71 ~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~-d~~~~g~I~~~ef~~~~~~~------~~~~~~~~~~~~F~~~D~~~~G 143 (229)
.|+..+|..++..++..++..+ +..+|..+ |.+++|.|+|.||+.++... ........++.+|+.+|.+++|
T Consensus 20 ~i~~~el~~~l~~~g~~~~~~~-~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G 98 (148)
T 1m45_A 20 AIAKDSLGDYLRAIGYNPTNQL-VQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTG 98 (148)
T ss_dssp EEEGGGHHHHHHHTTCCCCHHH-HHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSS
T ss_pred CCCHHHHHHHHHHhCCCCCHHH-HHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCC
Confidence 3999999999999877666665 78999999 99999999999999999887 4556678899999999999999
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 144 FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 144 ~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
+|+.+||..++..++.. .+++ .+..++..+|.+++|.|+|+||+.++..
T Consensus 99 ~I~~~el~~~l~~~g~~-----~~~~----~~~~~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 99 KVSVGDLRYMLTGLGEK-----LTDA----EVDELLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp EEEHHHHHHHHHHSTTC-----CCHH----HHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHcCCC-----CCHH----HHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence 99999999999887532 2333 3788999999999999999999998864
No 48
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.83 E-value=3.2e-20 Score=142.25 Aligned_cols=156 Identities=22% Similarity=0.348 Sum_probs=125.1
Q ss_pred CCchhhhHhhcCCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHH
Q psy8447 40 STSTPVVVQVSGLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVL 116 (229)
Q Consensus 40 ~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~ 116 (229)
+.++..+.+..++++.++..+...|..+|.++ |+..+|..++ .++..+. ...+|+.+|.+++|.|+|+||+.
T Consensus 11 ~~~~~~l~~~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~----~~~l~~~~d~~~~g~i~~~EF~~ 85 (208)
T 2ct9_A 11 DEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPL----GDRIINAFFSEGEDQVNFRGFMR 85 (208)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTT----HHHHHHTTSCTTCSCEEHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCc----HHHHHHHHcCCCCCcCcHHHHHH
Confidence 44566777778888888888888888777543 9999998865 4443333 35678999999999999999999
Q ss_pred HHHhhccC----------------ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHH
Q psy8447 117 GLSCFLRG----------------TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALR 180 (229)
Q Consensus 117 ~~~~~~~~----------------~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (229)
++...... ...+.++.+|+.||.|++|+|+.+||..++..+.+ ...+++.+..+++.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g----~~~s~~~~~~l~~~~~~ 161 (208)
T 2ct9_A 86 TLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVG----VNISDEQLGSIADRTIQ 161 (208)
T ss_dssp HHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSC----TTCCHHHHHHHHHHHHH
T ss_pred HHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhC----CCCCHHHHHHHHHHHHH
Confidence 99876532 25678999999999999999999999999987621 23466677777777899
Q ss_pred HcCCCCCCcccHHHHHHHHhcChH
Q psy8447 181 KMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 181 ~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
.+|.|+||.|+|+||+.++...+.
T Consensus 162 ~~D~d~dG~Is~~EF~~~~~~~~~ 185 (208)
T 2ct9_A 162 EADQDGDSAISFTEFVKVLEKVDV 185 (208)
T ss_dssp HHCSSSSSSEEHHHHHHTTTTSCG
T ss_pred HhCCCCCCcCcHHHHHHHHhccCh
Confidence 999999999999999999987654
No 49
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.83 E-value=7.5e-20 Score=136.07 Aligned_cols=132 Identities=13% Similarity=0.240 Sum_probs=108.2
Q ss_pred CCHHHHHHHHhhh-c-------CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCC
Q psy8447 72 LDRVVFRELLHNT-F-------DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDG 143 (229)
Q Consensus 72 i~~~ef~~~l~~~-~-------~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G 143 (229)
|+..+|..++..+ + ...+..+ +..+|+.+|.+++|.|+|+||+.++... ..++.+|+.+|.+++|
T Consensus 20 i~~~el~~~l~~~~g~~~~~~~~~~~~~~-~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G 92 (173)
T 1alv_A 20 VSATELMNILNKVVTRHPDLKTDGFGIDT-CRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRSG 92 (173)
T ss_dssp BCHHHHHHHHHHHHHTCSTTCCSCCCHHH-HHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCS
T ss_pred cCHHHHHHHHHHhhhcccccccCCCCHHH-HHHHHHHHcCCCCCccCHHHHHHHHHHH------HHHHHHHHHHCCCCCC
Confidence 8899999998886 3 3344444 7889999999999999999999988754 6788999999999999
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccCCChHHHH
Q psy8447 144 FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 144 ~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (229)
+|+.+|+..++..++... +++ .++.++..+| +++|.|+|+||+.++...+.+..+|....+...|..
T Consensus 93 ~i~~~el~~~l~~~g~~~-----~~~----~~~~~~~~~d-d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i 159 (173)
T 1alv_A 93 TIGSSELPGAFEAAGFHL-----NEH----LYSMIIRRYS-DEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQI 159 (173)
T ss_dssp SBCTTTHHHHHHHHTCCC-----CHH----HHHHHHHHHT-CSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEE
T ss_pred CCCHHHHHHHHHHcCCCC-----CHH----HHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCee
Confidence 999999999998875322 332 3677888888 999999999999999988888889998887766654
No 50
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.82 E-value=4.9e-20 Score=136.90 Aligned_cols=151 Identities=19% Similarity=0.218 Sum_probs=101.7
Q ss_pred hHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHH
Q psy8447 55 SNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTF 134 (229)
Q Consensus 55 ~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F 134 (229)
.++..++..|+....+.|+..+|..++..++........+..+|..+|.+++|.|+|+||+.++... ..++.+|
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~~~F 80 (172)
T 2znd_A 7 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQNVF 80 (172)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHHHHH
T ss_pred hHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence 3444455555444444477788887777665222233336777888888888888888887776643 5677788
Q ss_pred HHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccCC
Q psy8447 135 LIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCLP 214 (229)
Q Consensus 135 ~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~~ 214 (229)
+.+|.+++|+|+.+|+..++..++... +++ .+..++..+|.+++|.|+|+||..++...+.+..+|.....
T Consensus 81 ~~~D~d~~G~i~~~el~~~l~~~g~~~-----~~~----~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~ 151 (172)
T 2znd_A 81 RTYDRDNSGMIDKNELKQALSGFGYRL-----SDQ----FHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDT 151 (172)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHTTCCC-----CHH----HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHCCCCCCccCHHHHHHHHHHcCCCC-----CHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 888888888888888888777653221 222 36667777888888888888888877777777777777766
Q ss_pred ChHHHH
Q psy8447 215 SDAARQ 220 (229)
Q Consensus 215 ~~~~~~ 220 (229)
...|..
T Consensus 152 d~dG~i 157 (172)
T 2znd_A 152 DQDGWI 157 (172)
T ss_dssp TSSSCC
T ss_pred CCCCeE
Confidence 655544
No 51
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.82 E-value=3e-19 Score=131.71 Aligned_cols=137 Identities=15% Similarity=0.190 Sum_probs=104.9
Q ss_pred ChhHHHHHHhccCccCCC---CCCHHHHHHHHhhhcC-CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChH
Q psy8447 53 PPSNVTERYKGFSPFSFQ---GLDRVVFRELLHNTFD-LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNE 127 (229)
Q Consensus 53 ~~~~~~~l~~~f~~~d~~---~i~~~ef~~~l~~~~~-~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~ 127 (229)
++.++..+...|..+|.+ .|+..+|..++..++. .++..+ +..++.. .+|.|+|.||+.++..... ....
T Consensus 20 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~-~~~l~~~----~dg~i~~~eF~~~~~~~~~~~~~~ 94 (166)
T 2mys_B 20 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE-LDAMIKE----ASGPINFTVFLTMFGEKLKGADPE 94 (166)
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHH-HHHHHHH----CCCCcCHHHHHHHHHHHhccCCcH
Confidence 344444444444433332 2999999999999877 666655 5667765 3799999999999987643 3566
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
+.++.+|+.||.|++|+|+.+||..++..++.. .+++ .+..++..+|.|++|.|+|+||+.++...+
T Consensus 95 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~-----~~~~----~~~~~~~~~D~d~dg~I~~~eF~~~~~~~~ 161 (166)
T 2mys_B 95 DVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGR-----FTPE----EIKNMWAAFPPDVAGNVDYKNICYVITHGE 161 (166)
T ss_pred HHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCC-----CCHH----HHHHHHHhcCCCCCCeEeHHHHHHHHHhcc
Confidence 789999999999999999999999999876432 2333 377899999999999999999999987643
No 52
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.82 E-value=7.6e-20 Score=139.33 Aligned_cols=160 Identities=17% Similarity=0.270 Sum_probs=122.8
Q ss_pred HHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHH
Q psy8447 57 VTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLI 136 (229)
Q Consensus 57 ~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~ 136 (229)
+..++..|+....+.|+..+|..++..++...+..+ +..+|+.+|.+++|.|+|+||+.++.........+.++.+|+.
T Consensus 39 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~-~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~F~~ 117 (204)
T 3e3r_A 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAE-AEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAK 117 (204)
T ss_dssp -CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHH-HHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHH-HHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 444455555444445999999999999887666666 7999999999999999999999998876655566789999999
Q ss_pred hcCCCCCcccHHHHHHHHHHHhhc--CCCCCCChHHHHHHHHHHHHHcCC-CCCCcccHHHHHHHHhcChHHHHHhcccC
Q psy8447 137 YDLNNDGFITREEMFQLLRNSLIS--HPQDEDPDEGVRDLVELALRKMDY-DKDGKISFQDFQQSVTDEPLLLEAFGQCL 213 (229)
Q Consensus 137 ~D~~~~G~I~~~e~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~-~~dg~Is~~ef~~~~~~~~~~~~~~~~~~ 213 (229)
+|.+++|+|+.+||..++..++.. ..... ..++.+..+|+.+|. |+||.|+|+||..++.. ++...
T Consensus 118 ~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~-------~~~~~ 186 (204)
T 3e3r_A 118 LDRSGDGVVTVDDLRGVYSGRAHPKVRSGEW----TEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSG-------VSASM 186 (204)
T ss_dssp HCTTCSSEECHHHHHHHCCCTTCHHHHTTSS----CHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHH-------HHHHC
T ss_pred hCcCCCCeEeHHHHHHHHccccCCccccCCC----ChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHH-------cCccC
Confidence 999999999999999998743210 00111 233458889999998 99999999999997664 33445
Q ss_pred CChHHHHHHHhhhhc
Q psy8447 214 PSDAARQSFLSTLQA 228 (229)
Q Consensus 214 ~~~~~~~~~~~~~~~ 228 (229)
+.++....+.+.-|.
T Consensus 187 ~~d~~f~~~~~~~w~ 201 (204)
T 3e3r_A 187 NTDEEFVAMMTSAWQ 201 (204)
T ss_dssp SSHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHhCC
Confidence 667777777766664
No 53
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.82 E-value=2.9e-21 Score=145.95 Aligned_cols=121 Identities=19% Similarity=0.269 Sum_probs=103.0
Q ss_pred CCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 71 GLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 71 ~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
.|+..+|..++..++..++..+ +..+|+.+|.+++|.|+|+||+.++..+......+.++.+|+.+|.+++|+|+.+||
T Consensus 26 ~I~~~E~~~~l~~~g~~~~~~~-~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El 104 (188)
T 1s6i_A 26 TITFDELKDGLKRVGSELMESE-IKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEI 104 (188)
T ss_dssp CEEHHHHHHHHTTTTCCCCHHH-HHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHH
T ss_pred cCCHHHHHHHHHHcCCCCCHHH-HHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHH
Confidence 3999999999999877666655 789999999999999999999999877655455567899999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++..++ . +++ .+..+++.+|.|++|.|+|+||+.++...+
T Consensus 105 ~~~l~~~g--~-----~~~----~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 146 (188)
T 1s6i_A 105 QQACKDFG--L-----DDI----HIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146 (188)
T ss_dssp HHTTTTTT--C-----CTT----HHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred HHHHHHcC--C-----CHH----HHHHHHHHHCCCCCCcEeHHHHHHHHHHcC
Confidence 99987653 1 222 377899999999999999999999997654
No 54
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.82 E-value=1.5e-20 Score=141.65 Aligned_cols=138 Identities=22% Similarity=0.225 Sum_probs=109.0
Q ss_pred ChhHHHHHHhccCccCCC---CCCHHHHHHHHhhh-----------cCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHH
Q psy8447 53 PPSNVTERYKGFSPFSFQ---GLDRVVFRELLHNT-----------FDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGL 118 (229)
Q Consensus 53 ~~~~~~~l~~~f~~~d~~---~i~~~ef~~~l~~~-----------~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~ 118 (229)
++.++..+...|..+|.+ .|+..+|..++..+ +.. .....+..+|+.+|.+++|.|+|+||+.++
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~ 113 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSS-QIEAEVDHILQSVDFDRNGYIEYSEFVTVC 113 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHH-HHHHHHHHHHHHTCTTCSSSEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccch-hhHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 444455555555554443 39999999999876 322 334447899999999999999999999998
Q ss_pred HhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy8447 119 SCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQS 198 (229)
Q Consensus 119 ~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~ 198 (229)
.........+.++.+|+.+|.+++|+|+.+||..++. + ...+++ .+..++..+|.|++|.|+|+||+.+
T Consensus 114 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~-----~~~~~~----~~~~~~~~~D~~~dg~i~~~eF~~~ 182 (191)
T 3khe_A 114 MDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--V-----TEVDDE----TWHQVLQECDKNNDGEVDFEEFVEM 182 (191)
T ss_dssp SCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--S-----SCCCHH----HHHHHHHHHCTTCSSSEEHHHHHHH
T ss_pred HHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--c-----CCCCHH----HHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 7766667778899999999999999999999999986 2 122333 3778999999999999999999998
Q ss_pred HhcC
Q psy8447 199 VTDE 202 (229)
Q Consensus 199 ~~~~ 202 (229)
+...
T Consensus 183 ~~~~ 186 (191)
T 3khe_A 183 MQKI 186 (191)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8653
No 55
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.82 E-value=1.2e-19 Score=138.95 Aligned_cols=138 Identities=17% Similarity=0.181 Sum_probs=104.0
Q ss_pred CChhHHHHHHhccCccCCC---CCCHHHHHHHHhhhcC--CCcHHHHHHHHH-------HHHccCCCCceeHHHHHHHHH
Q psy8447 52 LPPSNVTERYKGFSPFSFQ---GLDRVVFRELLHNTFD--LVTEEILMERIF-------CAFDRLCDGVIHLDEWVLGLS 119 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~---~i~~~ef~~~l~~~~~--~~~~~~~~~~lf-------~~~d~~~~g~I~~~ef~~~~~ 119 (229)
+++.++..+...|..+|.+ .|+..+|..++..++. .++..+ +..++ ..+|.+++|.|+|+||+.++.
T Consensus 30 l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~-~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~ 108 (208)
T 2hpk_A 30 LHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQ-VEKMRDAVRVFFLHKGVEPVNGLLREDWVEANR 108 (208)
T ss_dssp ------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHH-HHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHH-HHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 4454555555555554443 3999999999998865 555555 67777 999999999999999999986
Q ss_pred ---------hhc-cCChHH-HHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q psy8447 120 ---------CFL-RGTNEE-LIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDG 188 (229)
Q Consensus 120 ---------~~~-~~~~~~-~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg 188 (229)
.+. .....+ .++.+|+.+|.|++|+|+.+||..++..++ . +++ .+..++..+|.|+||
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~-----~~~----~~~~~~~~~D~d~dG 177 (208)
T 2hpk_A 109 VFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--V-----PQE----AAYTFFEKADTDKSG 177 (208)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--S-----CTT----HHHHHHHHHCTTCCS
T ss_pred HHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--c-----CHH----HHHHHHHHhCCCCCC
Confidence 332 223333 489999999999999999999999998775 2 222 267899999999999
Q ss_pred cccHHHHHHHHhc
Q psy8447 189 KISFQDFQQSVTD 201 (229)
Q Consensus 189 ~Is~~ef~~~~~~ 201 (229)
.|+|+||..++..
T Consensus 178 ~I~~~EF~~~~~~ 190 (208)
T 2hpk_A 178 KLERTELVHLFRK 190 (208)
T ss_dssp SBCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHH
Confidence 9999999998763
No 56
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.82 E-value=5.4e-20 Score=146.04 Aligned_cols=190 Identities=13% Similarity=0.126 Sum_probs=144.1
Q ss_pred cCcHHHHHHHHH-HHHHHhhcCCCCCCCCCCchhhh-----------Hhhc--CCChhHHHHHHhccCccCCCCCCHHHH
Q psy8447 12 LSFRQEVETLCK-IFKKLLNSSSNAGVPISTSTPVV-----------VQVS--GLPPSNVTERYKGFSPFSFQGLDRVVF 77 (229)
Q Consensus 12 ~~~~~~i~~l~~-~f~~l~~~~~~~~~~~~~~~~~~-----------~~~~--~l~~~~~~~l~~~f~~~d~~~i~~~ef 77 (229)
.+++.++..+.. .|..++.+++|. +...++... .... ..+..++..++..|+....+.|+..+|
T Consensus 49 ~~~~~~~~~~~~~~f~~~D~d~~g~--i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~ 126 (272)
T 2be4_A 49 KITDERVQQIKKSFMSAYDATFDGR--LQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAEL 126 (272)
T ss_dssp CCCHHHHHHHHHHHSCHHHHTCCSE--EEHHHHHHHHSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGH
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCc--EeHHHHHHHHhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHH
Confidence 567888877654 447777777664 555555544 2222 456677888888887666566999999
Q ss_pred HHHHhhh----cCCCcHHHH---HHHHHHHHccCCCCceeHHHHHHHHHhh------------ccCChHHHHHHHHHHhc
Q psy8447 78 RELLHNT----FDLVTEEIL---MERIFCAFDRLCDGVIHLDEWVLGLSCF------------LRGTNEELIKFTFLIYD 138 (229)
Q Consensus 78 ~~~l~~~----~~~~~~~~~---~~~lf~~~d~~~~g~I~~~ef~~~~~~~------------~~~~~~~~~~~~F~~~D 138 (229)
..++..+ +...+..+. +..+|+.+|.+++|.|+|+||+.++... ......+.++.+|+.+|
T Consensus 127 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D 206 (272)
T 2be4_A 127 KNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYD 206 (272)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhC
Confidence 9999987 555555442 3569999999999999999999887541 11134567999999999
Q ss_pred CCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChH
Q psy8447 139 LNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 139 ~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
.|++|+|+.+||..++..++... ....+++.+...+..+|..+|.|+||.|+|+||+.++...|.
T Consensus 207 ~d~~G~Is~~E~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~~~p~ 271 (272)
T 2be4_A 207 VSRTGALEGPEVDGFVKDMMELV-RPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGLKHK 271 (272)
T ss_dssp TTCCSEEETHHHHHHHHHHHHHH-SSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTTCCCC
T ss_pred CCCCCeecHHHHHHHHHHHHHHc-CCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHccCCC
Confidence 99999999999999998876521 123466677777788999999999999999999999988764
No 57
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.82 E-value=5.6e-20 Score=133.86 Aligned_cols=117 Identities=10% Similarity=0.210 Sum_probs=98.3
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+|..++..++..++..+ +..++..+ +|.|+|.||+.++..... ....+.++.+|+.||.+++|+|+.+||
T Consensus 33 i~~~el~~~l~~~g~~~~~~~-~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el 107 (153)
T 2ovk_B 33 IGMEDLKDMFSSLGRVPPDDE-LNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYL 107 (153)
T ss_dssp CCHHHHHHHTTTTTSCCCHHH-HHHHHHHS----SSCCCSHHHHHTTTTTTTTCCCTTHHHHHHHTTCSSCSSCCCHHHH
T ss_pred ECHHHHHHHHHHhCCCCCHHH-HHHHHHHc----CCCCCHHHHHHHHHHHhccCChHHHHHHHHHHHCCCCCCeEcHHHH
Confidence 999999999999887666666 67777776 899999999999886543 345678999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++..++.. .+++ .+..+++.+|. ++|.|+|+||+.++...|
T Consensus 108 ~~~l~~~g~~-----~~~~----~~~~~~~~~d~-~dg~I~~~eF~~~~~~~~ 150 (153)
T 2ovk_B 108 KDLLENMGDN-----FSKE----EIKNVWKDAPL-KNKQFNYNKMVDIKGKAE 150 (153)
T ss_dssp HHHHHHSSSC-----CCHH----HHHHHHHHCCE-ETTEECHHHHHHHHHCSC
T ss_pred HHHHHHcCCC-----CCHH----HHHHHHHHcCC-CCCEEeHHHHHHHHhcCc
Confidence 9999887532 2333 37889999999 999999999999998776
No 58
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.82 E-value=3.8e-21 Score=139.65 Aligned_cols=119 Identities=13% Similarity=0.147 Sum_probs=96.8
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccC--CCCceeHHHHHHHHHhhccC---ChHHHHHHHHHHhcCCCCCccc
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRL--CDGVIHLDEWVLGLSCFLRG---TNEELIKFTFLIYDLNNDGFIT 146 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~--~~g~I~~~ef~~~~~~~~~~---~~~~~~~~~F~~~D~~~~G~I~ 146 (229)
|+..+|..++..++..++..+ +..+|..+|.+ ++|.|+|.||+.++...... .....++.+|+.+|.+++|+|+
T Consensus 27 i~~~el~~~l~~~g~~~~~~~-~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~ 105 (151)
T 1w7j_B 27 ILYSQCGDVMRALGQNPTNAE-VLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVM 105 (151)
T ss_dssp EESTTHHHHHHHTTCCCCHHH-HHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTTSSSEEE
T ss_pred CcHHHHHHHHHHcCCCCCHHH-HHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCCCCCcCc
Confidence 888889999988877666555 78899999999 99999999999999887542 2345678899999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 147 REEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 147 ~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.+||..++..++.. .+++ .+..++..+| +++|.|+|+||+.++..
T Consensus 106 ~~el~~~l~~~g~~-----~~~~----~~~~~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 106 GAELRHVLTTLGEK-----MTEE----EVETVLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp HHHHHHHHHHSSSC-----CCHH----HHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred HHHHHHHHHHcCCC-----CCHH----HHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence 99999999887432 2333 3788999999 99999999999998764
No 59
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.82 E-value=3.2e-19 Score=140.92 Aligned_cols=142 Identities=16% Similarity=0.230 Sum_probs=104.5
Q ss_pred HHHHHhccCccCCCCCCHHHHHHHHhhh----cCCCcHHH---HHHHHHHHHccCCCCceeHHHHHHHHHh-------h-
Q psy8447 57 VTERYKGFSPFSFQGLDRVVFRELLHNT----FDLVTEEI---LMERIFCAFDRLCDGVIHLDEWVLGLSC-------F- 121 (229)
Q Consensus 57 ~~~l~~~f~~~d~~~i~~~ef~~~l~~~----~~~~~~~~---~~~~lf~~~d~~~~g~I~~~ef~~~~~~-------~- 121 (229)
+..++..|+....+.|+..+|..++..+ +..++..+ .+..+|+.+|.+++|.|+|+||+.++.. .
T Consensus 105 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~~~~ 184 (263)
T 2f33_A 105 FMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQ 184 (263)
T ss_dssp HHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHHHHH
T ss_pred HHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHHHhc
Confidence 3344444444333449999999998877 55555544 2234999999999999999999988764 1
Q ss_pred ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHH-cCCCCCCcccHHHHHHHHh
Q psy8447 122 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRK-MDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 122 ~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~dg~Is~~ef~~~~~ 200 (229)
........++.+|+.+|.|++|+|+.+||..++..++... ....+++. +..++.. +|.|+||.|+|+||+.++.
T Consensus 185 ~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~-~~~~~~~e----~~~~~~~~~D~d~dG~i~~~EF~~~~~ 259 (263)
T 2f33_A 185 GIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKN-KQELDINN----ISTYKKNIMALSDGGKLYRTDLALILS 259 (263)
T ss_dssp HTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHC-TTTCCTTT----HHHHHHHHHTTSBTTEECGGGTHHHHC
T ss_pred CcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhc-CCCCCHHH----HHHHHHHhhccCCCCeEcHHHHHHHHh
Confidence 2345678899999999999999999999999999887521 11223333 4556665 6999999999999999987
Q ss_pred cCh
Q psy8447 201 DEP 203 (229)
Q Consensus 201 ~~~ 203 (229)
..+
T Consensus 260 ~~~ 262 (263)
T 2f33_A 260 AGD 262 (263)
T ss_dssp CSC
T ss_pred ccC
Confidence 654
No 60
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.81 E-value=3.9e-19 Score=133.02 Aligned_cols=118 Identities=13% Similarity=0.120 Sum_probs=96.3
Q ss_pred CCHHHHHHHHhhhc----CCCcHHHHHH-----------HHHHHHccCCCCceeHHHHHHHHHhhccC---------ChH
Q psy8447 72 LDRVVFRELLHNTF----DLVTEEILME-----------RIFCAFDRLCDGVIHLDEWVLGLSCFLRG---------TNE 127 (229)
Q Consensus 72 i~~~ef~~~l~~~~----~~~~~~~~~~-----------~lf~~~d~~~~g~I~~~ef~~~~~~~~~~---------~~~ 127 (229)
|+..+|..++..++ ..++..+ +. .+|+.+|.+++|.|+++||+.++...... ...
T Consensus 26 i~~~E~~~~l~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~ 104 (185)
T 2sas_A 26 IQDNDFEDMMTRYKEVNKGSLSDAD-YKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQ 104 (185)
T ss_dssp ECHHHHHHHHHHHHHHHGGGSCHHH-HHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHH
T ss_pred EcHHHHHHHHHHHHHhhcCCCCHHH-HHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHH
Confidence 88999988888876 4445444 33 45999999999999999999998876432 345
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
..++.+|+.+|.|++|+|+.+||..++..++ .+.. .+..+|+.+|.|++|.|+++||+.++..
T Consensus 105 ~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g--~~~~---------~~~~~~~~~D~d~dG~i~~~ef~~~~~~ 167 (185)
T 2sas_A 105 NRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCA---------DVPAVYNVITDGGKVTFDLNRYKELYYR 167 (185)
T ss_dssp HHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCS---------SHHHHHHHHHTTTTSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC--CCHH---------HHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 7899999999999999999999999997653 2222 2788999999999999999999998764
No 61
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.81 E-value=9.6e-20 Score=148.69 Aligned_cols=172 Identities=18% Similarity=0.266 Sum_probs=135.3
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC--CChhHHHHHH--------------------------
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG--LPPSNVTERY-------------------------- 61 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~l~-------------------------- 61 (229)
...+|++++..+...|..++.+++|. ++..++..+....+ ++..++..++
T Consensus 113 ~~~Ls~~e~~~l~~~F~~~D~d~dG~--Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~~~~~~l 190 (323)
T 1ij5_A 113 KPMLSEEDTNILRQLFLSSAVSGSGK--FSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAAL 190 (323)
T ss_dssp CCCCCHHHHHHHHHHHTSSSSTTSSC--CCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTS
T ss_pred HHhCCHHHHHHHHHHHHHHhCCCCCC--CcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhhhHHHHH
Confidence 46899999999999999999887765 77677766665544 3444444443
Q ss_pred -hccCccCCC---CCCHHHHHHHHhhhcCCCcHHHHHHH-HHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHH
Q psy8447 62 -KGFSPFSFQ---GLDRVVFRELLHNTFDLVTEEILMER-IFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLI 136 (229)
Q Consensus 62 -~~f~~~d~~---~i~~~ef~~~l~~~~~~~~~~~~~~~-lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~ 136 (229)
..|..+|.+ .|+..+|..++ ++..++... +.. +|..+|.+++|.|+|.+|+.++.... .+..+|..
T Consensus 191 ~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~e-i~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~~~F~~ 261 (323)
T 1ij5_A 191 VADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKS-VQDALFRYADEDESDDVGFSEYVHLGLCLL------VLRILYAF 261 (323)
T ss_dssp CCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHH-HHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHH-HHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHHHHHHH
Confidence 334444443 39999999999 555455555 788 99999999999999999999998764 78999999
Q ss_pred hcCCCCCcccHHHHHHHH-HHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 137 YDLNNDGFITREEMFQLL-RNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 137 ~D~~~~G~I~~~e~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
||.+++|+|+.+||..++ ..++...+... +..+|..+|.|+||.|+|+||+.++..
T Consensus 262 ~D~d~dG~Is~~El~~~l~~~~g~~ls~~e---------~~~l~~~~D~d~dG~Is~~EF~~~~~~ 318 (323)
T 1ij5_A 262 ADFDKSGQLSKEEVQKVLEDAHIPESARKK---------FEHQFSVVDVDDSKSLSYQEFVMLVLL 318 (323)
T ss_dssp TCSSSCSSEEHHHHHHHHHHTTCCGGGCST---------HHHHHHHHTTTTCSEECHHHHHHHHHH
T ss_pred hCCCCCCCccHHHHHHHHHHHcCCCCCHHH---------HHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence 999999999999999999 76653333222 788999999999999999999998763
No 62
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.81 E-value=4e-19 Score=129.71 Aligned_cols=117 Identities=13% Similarity=0.182 Sum_probs=96.6
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc-cCChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~-~~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+|..++..++..++..+ +..++. +++|.|+|.||+.++.... .....+.++.+|+.||.+++|+|+.+||
T Consensus 35 i~~~el~~~l~~~g~~~~~~~-~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el 109 (156)
T 1wdc_B 35 VSKEDIKAISEQLGRAPDDKE-LTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYI 109 (156)
T ss_dssp CCHHHHHHHHHHHSSCCCHHH-HHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHH
T ss_pred CcHHHHHHHHHHhCCCCCHHH-HHHHHH----hCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCcCCCCccCHHHH
Confidence 999999999999877666655 455553 5789999999999998654 3456788999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++..++.. .+++ .+..+++.+|.+ +|.|+|+||+.++...+
T Consensus 110 ~~~l~~~g~~-----~~~~----~~~~~~~~~d~~-dg~i~~~eF~~~~~~~~ 152 (156)
T 1wdc_B 110 KDLLENMGDN-----FNKD----EMRMTFKEAPVE-GGKFDYVKFTAMIKGSG 152 (156)
T ss_dssp HHHHHHSSSC-----CCHH----HHHHHHHHCCEE-TTEECHHHHHHHHHTSC
T ss_pred HHHHHHhCCC-----CCHH----HHHHHHHhcCCC-CCEEeHHHHHHHHhcCc
Confidence 9999876432 2333 378899999999 99999999999987653
No 63
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.81 E-value=4.5e-19 Score=133.75 Aligned_cols=117 Identities=13% Similarity=0.094 Sum_probs=94.0
Q ss_pred CCHHHHHHHHhhh----cCCCcHHHHHHHHH-----------HHHccCCCCceeHHHHHHHHHhhcc---------CChH
Q psy8447 72 LDRVVFRELLHNT----FDLVTEEILMERIF-----------CAFDRLCDGVIHLDEWVLGLSCFLR---------GTNE 127 (229)
Q Consensus 72 i~~~ef~~~l~~~----~~~~~~~~~~~~lf-----------~~~d~~~~g~I~~~ef~~~~~~~~~---------~~~~ 127 (229)
|+..+|..++..+ +...+... +..++ +.+|.|++|.|+++||+.++..... ....
T Consensus 30 i~~~E~~~~l~~~~~~~g~~~~~~~-~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~ 108 (191)
T 2ccm_A 30 IEWDDFELAIKKICNLHSWPTDGKK-HNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLT 108 (191)
T ss_dssp ECHHHHHHHHHHHHHHHTCCTTSHH-HHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred eeHHHHHHHHHHHHHHhCCCCCCHH-HHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHH
Confidence 8888888888776 44344333 45555 9999999999999999999887632 2334
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..++.+|+.+|.|++|+|+.+||..++..++ .+++ .+..+|+.+|.|+||.|+++||..++.
T Consensus 109 ~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-------~~~~----~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 170 (191)
T 2ccm_A 109 KYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-------IPKS----DCDAAFDTLSDGGKTMVTREIFARLWT 170 (191)
T ss_dssp HHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT-------CCHH----HHHHHHHHHTTTTTSCCBHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-------CCHH----HHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence 6789999999999999999999999997653 2232 377899999999999999999999876
No 64
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.81 E-value=1e-19 Score=141.40 Aligned_cols=124 Identities=12% Similarity=0.006 Sum_probs=94.5
Q ss_pred CCHHHHHH-HHhhhcCCCcH---HHHHHHHHHHH-----ccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCC
Q psy8447 72 LDRVVFRE-LLHNTFDLVTE---EILMERIFCAF-----DRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNND 142 (229)
Q Consensus 72 i~~~ef~~-~l~~~~~~~~~---~~~~~~lf~~~-----d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~ 142 (229)
|+..+|.. ++..++...+. ...+..+|..+ |.+++|.|+|.||+.++.........+.++.+|+.||.|++
T Consensus 68 Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~d 147 (226)
T 2lvv_A 68 LGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGS 147 (226)
T ss_dssp BCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred CcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhccCHHHHHHHHHHHcCCCC
Confidence 88999998 44444433332 23344455555 99999999999999976555443445689999999999999
Q ss_pred CcccHHHHHHHHHHHhh-cCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChH
Q psy8447 143 GFITREEMFQLLRNSLI-SHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 143 G~I~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
|+|+.+||..++..++. ..+..+ +..+|..+|.++||.|+|+||+.++.....
T Consensus 148 G~Is~~El~~~l~~~~~~g~~~~e---------~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 201 (226)
T 2lvv_A 148 LLLELQEFKEALPKLKEWGVDITD---------ATTVFNEIDTNGSGVVTFDEFSCWAVTKKL 201 (226)
T ss_dssp CEECHHHHHHHHHHHHHHTCCCCS---------CHHHHHHHCCSCSSCEEHHHHHHHHHHHHH
T ss_pred CeEcHHHHHHHHHHHhhcCCCHHH---------HHHHHHHhCCCCCCcEeHHHHHHHHHhcCC
Confidence 99999999999988732 222221 677999999999999999999999987554
No 65
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.81 E-value=9.5e-20 Score=138.42 Aligned_cols=137 Identities=17% Similarity=0.187 Sum_probs=108.8
Q ss_pred CChhHHHHHHhccCccCCC---CCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CChH
Q psy8447 52 LPPSNVTERYKGFSPFSFQ---GLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTNE 127 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~---~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~~ 127 (229)
+++.++..+...|..+|.+ .|+..+|..++..++..++..+ +..++..+ +|.|+|.||+.++..... ....
T Consensus 51 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~-~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~ 125 (196)
T 3dtp_E 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQE-LDSMVAEA----PGPINFTMFLTIFGDRIAGTDEE 125 (196)
T ss_dssp SCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHH-HHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHH-HHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcH
Confidence 4555555555555555443 2999999999999887777666 56666655 899999999999987543 4567
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
+.+..+|+.||.|++|+|+.+||..++ .++... +++ .+..+|..+|.|++|.|+|+||+.+|...|
T Consensus 126 ~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~-----~~~----~~~~l~~~~D~d~dG~I~~~EF~~~l~~~~ 191 (196)
T 3dtp_E 126 DVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKF-----SQD----EVDQALSEAPIDGNGLIDIKKFAQILTKGA 191 (196)
T ss_dssp HHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCC-----CHH----HHHHHHHSSCEETTEECHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCC-----CHH----HHHHHHHHcCCCCCCEEeHHHHHHHHHcCC
Confidence 889999999999999999999999999 765322 333 378899999999999999999999998765
No 66
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.81 E-value=1.1e-18 Score=129.50 Aligned_cols=161 Identities=18% Similarity=0.230 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC---CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHH
Q psy8447 17 EVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG---LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEIL 93 (229)
Q Consensus 17 ~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~ 93 (229)
+...+++.|..++.+++|. ++..++....+..+ ++..++..++..++....+.|+..+|..++... ..
T Consensus 5 ~~~~l~~~F~~~D~d~~G~--i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~-------~~ 75 (172)
T 2znd_A 5 DQSFLWNVFQRVDKDRSGV--ISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI-------TD 75 (172)
T ss_dssp -CHHHHHHHHHHCTTCSSC--EEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH-------HH
T ss_pred chhHHHHHHHHhCCCCCCc--CcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HH
Confidence 4567888999999887765 77777776666555 677889999998887666669999999987753 33
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+|.+++|.|+++||..++... .
T Consensus 76 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~---------------~ 140 (172)
T 2znd_A 76 WQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL---------------Q 140 (172)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH---------------H
T ss_pred HHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH---------------H
Confidence 7889999999999999999999999988777888999999999999999999999999998754 2
Q ss_pred HHHHHHHHcCCCCCCccc--HHHHHHHHhc
Q psy8447 174 LVELALRKMDYDKDGKIS--FQDFQQSVTD 201 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is--~~ef~~~~~~ 201 (229)
.+..+|+.+|.+++|.|+ +++|..++..
T Consensus 141 ~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 141 RLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp HHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 378899999999999996 7888887754
No 67
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.80 E-value=2.3e-19 Score=134.44 Aligned_cols=133 Identities=19% Similarity=0.253 Sum_probs=101.8
Q ss_pred hhHHHHHHhccCccCCC---CCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHH
Q psy8447 54 PSNVTERYKGFSPFSFQ---GLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELI 130 (229)
Q Consensus 54 ~~~~~~l~~~f~~~d~~---~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 130 (229)
+.++..+...|..+|.+ .|+..+|..++..++. ++ ..+..+|..+|.+++|.|+|+||+.++..... ...+.+
T Consensus 35 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~--~~-~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~ 110 (180)
T 3mse_B 35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGI--KK-WDINRILQALDINDRGNITYTEFMAGCYRWKN-IESTFL 110 (180)
T ss_dssp HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CH-HHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT-C--CHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--CH-HHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc-CCHHHH
Confidence 34444444444444433 3999999999998764 33 44789999999999999999999998876543 334689
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCC--------CcccHHHHHHHHhc
Q psy8447 131 KFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKD--------GKISFQDFQQSVTD 201 (229)
Q Consensus 131 ~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d--------g~Is~~ef~~~~~~ 201 (229)
+.+|+.+|.+++|+|+.+||..++.. ...+++ .+..++..+|.++| |.|+|+||+.++..
T Consensus 111 ~~~F~~~D~d~~G~I~~~El~~~l~~-------~~~~~~----~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 111 KAAFNKIDKDEDGYISKSDIVSLVHD-------KVLDNN----DIDNFFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp HHHHHHHCTTCSSCBCHHHHHHHTTT-------SSCCHH----HHHHHHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHcC-------CCCCHH----HHHHHHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 99999999999999999999999861 122333 37789999999988 99999999998864
No 68
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.80 E-value=1.8e-19 Score=129.73 Aligned_cols=137 Identities=16% Similarity=0.119 Sum_probs=108.6
Q ss_pred ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc--cCChHHHH
Q psy8447 53 PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL--RGTNEELI 130 (229)
Q Consensus 53 ~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~--~~~~~~~~ 130 (229)
+++++..++..|+....+.|+..+|..++..++..++..+ +..+|.. +++|.|+|.||+.++.... .......+
T Consensus 3 s~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~-~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l 78 (145)
T 2bl0_B 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAE-LNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEM 78 (145)
T ss_dssp CHHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHH-HHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHH
T ss_pred CHHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHH-HHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHH
Confidence 4444555555555544444999999999999877666665 6777777 8899999999999998763 34556789
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 131 KFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 131 ~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
+.+|+.+|.+++|+|+.+||..++..++.. .+++ .+..++..+|.+++|.|+|+||+.++...
T Consensus 79 ~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~-----~~~~----~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 141 (145)
T 2bl0_B 79 LDAFRALDKEGNGTIQEAELRQLLLNLGDA-----LTSS----EVEELMKEVSVSGDGAINYESFVDMLVTG 141 (145)
T ss_dssp HHHHHHHCSSSSSEEEHHHHHHHHHHSSSC-----CCHH----HHHHHHTTCCCCTTSEEEHHHHHHHHHHS
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHHcCCC-----CCHH----HHHHHHHHcCCCCCCcEeHHHHHHHHHhc
Confidence 999999999999999999999999877432 2332 37889999999999999999999988753
No 69
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.80 E-value=1.4e-19 Score=135.01 Aligned_cols=133 Identities=13% Similarity=0.213 Sum_probs=109.9
Q ss_pred CCHHHHHHHHhhhc------CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcc
Q psy8447 72 LDRVVFRELLHNTF------DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFI 145 (229)
Q Consensus 72 i~~~ef~~~l~~~~------~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I 145 (229)
|+..+|..+++.++ ...+..+ ++.++..+|.+++|.|+|+||+.++... ..++.+|+.|| |++|+|
T Consensus 21 I~~~EL~~~l~~l~~~~~~g~~~~~~~-~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-d~~G~I 92 (174)
T 2i7a_A 21 IDATQLQGLLNQELLTGPPGDMFSLDE-CRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-TSPGVL 92 (174)
T ss_dssp EEHHHHHHHHHHHHC-----CCCCHHH-HHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-SBTTBE
T ss_pred CCHHHHHHHHHHHHhccCCCCCCCHHH-HHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-CCCCcC
Confidence 99999999999872 3344444 7899999999999999999999988764 57899999999 999999
Q ss_pred cHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccCCChHH
Q psy8447 146 TREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCLPSDAA 218 (229)
Q Consensus 146 ~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~~~~~~ 218 (229)
+.+|++.+++.+.... ....+++ .++.+++.+| +++|.|+|+||+.++...+.+.++|+...+...|
T Consensus 93 ~~~El~~~l~~l~~~~-G~~~~~~----~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~G 159 (174)
T 2i7a_A 93 LSSDLWKAIENTDFLR-GIFISRE----LLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMAKTFRNLSKDGKG 159 (174)
T ss_dssp EGGGHHHHHHTCGGGT-TCCCCHH----HHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHHHHHHHHCSSSSC
T ss_pred CHHHHHHHHHHhHhcc-CCCCCHH----HHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999998761100 1122333 3677889999 9999999999999999989999999998887777
No 70
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.80 E-value=1.6e-19 Score=139.55 Aligned_cols=122 Identities=11% Similarity=-0.005 Sum_probs=93.5
Q ss_pred CCHHHHHHHHhh-hcCCCcHHH---HHHHHHHH----H-ccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCC
Q psy8447 72 LDRVVFRELLHN-TFDLVTEEI---LMERIFCA----F-DRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNND 142 (229)
Q Consensus 72 i~~~ef~~~l~~-~~~~~~~~~---~~~~lf~~----~-d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~ 142 (229)
|+..+|..++.. ++..++..+ .+..+|.. + +.+++|.|+|.||+.++.........+.++.+|+.||.|++
T Consensus 65 I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~ 144 (219)
T 3cs1_A 65 LCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGN 144 (219)
T ss_dssp BCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSS
T ss_pred CcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCC
Confidence 999999988876 444333322 22333332 2 23889999999999987665433455789999999999999
Q ss_pred CcccHHHHHHHHHHHhh-cCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 143 GFITREEMFQLLRNSLI-SHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 143 G~I~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
|+|+.+||..++..++. ..+... +..+|..+|.|+||.|+|+||+.++...
T Consensus 145 G~Is~~El~~~l~~~g~~~~~~~e---------~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 196 (219)
T 3cs1_A 145 MLVDEEEFKRAVPKLEAWGAKVED---------PAALFKELDKNGTGSVTFDEFAAWASAV 196 (219)
T ss_dssp SEEEHHHHHHHHHHHHHHTCCCSC---------HHHHHHHHCTTSSSEEEHHHHHHHHHHH
T ss_pred CcCcHHHHHHHHHHhcccCCCHHH---------HHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 99999999999998865 443333 6789999999999999999999998753
No 71
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.80 E-value=6.9e-19 Score=148.03 Aligned_cols=141 Identities=23% Similarity=0.376 Sum_probs=111.7
Q ss_pred CCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CCh
Q psy8447 51 GLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GTN 126 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~~ 126 (229)
.++..++..+...|..+|.++ |+..+|..++..++...+..+ +..+|+.+|.+++|.|+|+||+.++..... ...
T Consensus 305 ~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~ee-l~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~ 383 (450)
T 3sg6_A 305 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAE-LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 383 (450)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHH-HHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHH-HHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence 345555555555555554432 999999999999877666666 799999999999999999999999987543 345
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.+.++.+|+.+|.|++|+|+.+||..++..++... +++ .++.++..+|.|+||.|+|+||+.++..
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~l-----s~e----ei~~Lf~~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL-----TDE----EVDEMIREADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCC-----CHH----HHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 67899999999999999999999999999875432 332 3788999999999999999999998864
No 72
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.80 E-value=4.2e-18 Score=128.73 Aligned_cols=159 Identities=14% Similarity=0.125 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhc--CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHH
Q psy8447 18 VETLCKIFKKLLNSSSNAGVPISTSTPVVVQVS--GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILME 95 (229)
Q Consensus 18 i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~ 95 (229)
...+++.|..++.+++|. +...++....... .++..++..++..++....+.|+..+|..++... ..+.
T Consensus 26 ~~~l~~~F~~~D~d~~G~--I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~-------~~~~ 96 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGA--ISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI-------LSMR 96 (191)
T ss_dssp TSCHHHHHHHHCTTCSSS--BCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------HHHH
T ss_pred HHHHHHHHHHHcCCCCCc--CcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH-------HHHH
Confidence 456888999999887765 7777777666544 4577889999999987777779999999988753 3378
Q ss_pred HHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHH
Q psy8447 96 RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLV 175 (229)
Q Consensus 96 ~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~ 175 (229)
.+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+|.|++|.|+++||..++... ..+
T Consensus 97 ~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~---------------~~~ 161 (191)
T 1y1x_A 97 EGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV---------------CRV 161 (191)
T ss_dssp HHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---------------HHH
T ss_pred HHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH---------------HHH
Confidence 89999999999999999999999988777888999999999999999999999999998753 137
Q ss_pred HHHHHHcCCCCCCc--ccHHHHHHHHh
Q psy8447 176 ELALRKMDYDKDGK--ISFQDFQQSVT 200 (229)
Q Consensus 176 ~~~~~~~d~~~dg~--Is~~ef~~~~~ 200 (229)
..+|+.+|.+++|. ++++||+.++.
T Consensus 162 ~~~F~~~D~d~dG~i~~~~~eF~~~~~ 188 (191)
T 1y1x_A 162 RNVFAFYDRERTGQVTFTFDTFIGGSV 188 (191)
T ss_dssp HHHHHHHCTTCCSEEEEEHHHHHHHHH
T ss_pred HHHHHHhCcCCCceEEeeHHHHHHHHH
Confidence 78999999999999 78999999775
No 73
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.79 E-value=9.2e-20 Score=138.59 Aligned_cols=142 Identities=15% Similarity=0.171 Sum_probs=115.4
Q ss_pred HhccCccCCCCCCHHHHHHHHhhhcC-----CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHH
Q psy8447 61 YKGFSPFSFQGLDRVVFRELLHNTFD-----LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFL 135 (229)
Q Consensus 61 ~~~f~~~d~~~i~~~ef~~~l~~~~~-----~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~ 135 (229)
+..++....+.|+..+|..++..++. ..+.. .+..+|+.+|.+++|.|+|+||+.++... ..++.+|+
T Consensus 38 F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~-~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F~ 110 (198)
T 1juo_A 38 YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLE-TCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFI 110 (198)
T ss_dssp HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHH-HHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHH
T ss_pred HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHHH
Confidence 44444333333999999999999875 23444 47999999999999999999999998764 67999999
Q ss_pred HhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccCCC
Q psy8447 136 IYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCLPS 215 (229)
Q Consensus 136 ~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~~~ 215 (229)
.+|.|++|+|+.+|+..++..++.. .+++ .++.++..+ +++|.|+|+||+.++...+.+...|......
T Consensus 111 ~~D~d~~G~I~~~el~~~l~~~g~~-----~~~~----~~~~l~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d 179 (198)
T 1juo_A 111 SFDTDRSGTVDPQELQKALTTMGFR-----LSPQ----AVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRRDTA 179 (198)
T ss_dssp TTCTTCCSEECHHHHHHHHHHTTCC-----CCHH----HHHHHHHHT--CSSSSEEHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HhCCCCCCcCCHHHHHHHHHHhCCC-----CCHH----HHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999876432 2333 366677777 8999999999999999999999999988877
Q ss_pred hHHHH
Q psy8447 216 DAARQ 220 (229)
Q Consensus 216 ~~~~~ 220 (229)
..|..
T Consensus 180 ~~G~i 184 (198)
T 1juo_A 180 QQGVV 184 (198)
T ss_dssp CCSEE
T ss_pred CCCeE
Confidence 66654
No 74
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.79 E-value=1e-18 Score=129.63 Aligned_cols=117 Identities=16% Similarity=0.218 Sum_probs=95.3
Q ss_pred CCHHHHHHHHhhhc----CCCcHHH-H-------HHHHHHHHccCCCCceeHHHHHHHHHhhccC-----ChHHHHHHHH
Q psy8447 72 LDRVVFRELLHNTF----DLVTEEI-L-------MERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-----TNEELIKFTF 134 (229)
Q Consensus 72 i~~~ef~~~l~~~~----~~~~~~~-~-------~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-----~~~~~~~~~F 134 (229)
|+..+|..++..++ ..++..+ + +..+|+.+| ++|.|+|+||+.++...... .....++.+|
T Consensus 23 i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~F 100 (174)
T 1q80_A 23 ITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFF 100 (174)
T ss_dssp ESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHTTSTTCHHHHHTHHHHHH
T ss_pred EeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHcCcccHHHHHHHHHHHHH
Confidence 88999999988876 5555544 2 145778888 89999999999999887652 2346789999
Q ss_pred HHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 135 LIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 135 ~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
+.+|.+++|+|+.+||..++..++ . +++ .+..++..+|.|++|.|+|+||+.++..
T Consensus 101 ~~~D~d~~G~i~~~e~~~~l~~~g--~-----~~~----~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 156 (174)
T 1q80_A 101 RAVDTNEDNNISRDEYGIFFGMLG--L-----DKT----MAPASFDAIDTNNDGLLSLEEFVIAGSD 156 (174)
T ss_dssp HHHCTTSSSSBCHHHHHHHHHHHT--C-----CGG----GHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHhCCCCCCcccHHHHHHHHHHcC--C-----CHH----HHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence 999999999999999999998873 2 222 2778999999999999999999998864
No 75
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.78 E-value=1.9e-18 Score=127.71 Aligned_cols=133 Identities=14% Similarity=0.174 Sum_probs=109.9
Q ss_pred CCCHHHHHHHHhhhcCC----CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCccc
Q psy8447 71 GLDRVVFRELLHNTFDL----VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFIT 146 (229)
Q Consensus 71 ~i~~~ef~~~l~~~~~~----~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~ 146 (229)
.|+..+|..++..++.. ......+..+|+.+|.+++|.|+|+||+.++... ..++.+|+.+|.+++|+|+
T Consensus 17 ~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~ 90 (167)
T 1gjy_A 17 QIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDSDRSGTVD 90 (167)
T ss_dssp CBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEEC
T ss_pred cCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCCcCC
Confidence 39999999999998752 2234447899999999999999999999988764 6789999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccCCChHHHH
Q psy8447 147 REEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 147 ~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (229)
.+|+..++..++.. .+++. +..++..+ +++|.|+|+||..++...+.+..+|....+...|..
T Consensus 91 ~~el~~~l~~~g~~-----~~~~~----~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i 153 (167)
T 1gjy_A 91 PQELQKALTTMGFR-----LNPQT----VNSIAKRY--STSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMV 153 (167)
T ss_dssp HHHHHHHHHTTTCC-----CCHHH----HHHHHHHT--CBTTBEEHHHHHHHHHHHHHHHHHHHHHCTTCCSEE
T ss_pred HHHHHHHHHHcCCC-----CCHHH----HHHHHHHh--CcCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCeeE
Confidence 99999999866432 23333 66677777 889999999999999999999999998887766654
No 76
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.78 E-value=3.7e-19 Score=126.06 Aligned_cols=129 Identities=18% Similarity=0.260 Sum_probs=103.1
Q ss_pred HHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCChHHHHHHH
Q psy8447 57 VTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTNEELIKFT 133 (229)
Q Consensus 57 ~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~~~~~~~~ 133 (229)
++.++..++....+.|+..+|..++..++...+..+ +..+|+.+|.+++|.|+++||+.++..+ ....+...++.+
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~-~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQL-LQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVL 80 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHH-HHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHH-HHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHH
Confidence 344555555544444999999999998876555444 7999999999999999999999988532 122344569999
Q ss_pred HHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy8447 134 FLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSV 199 (229)
Q Consensus 134 F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~ 199 (229)
|+.+|.+++|+|+.+||..++..++. .. +..+|..+|.+++|.|+|+||..++
T Consensus 81 f~~~D~d~~G~i~~~e~~~~l~~~~~----------~~---~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 81 YKLMDVDGDGKLTKEEVTSFFKKHGI----------EK---VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHCCSSSSEEEHHHHHHHHTTTTC----------HH---HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHCCCCCCccCHHHHHHHHHHhCH----------HH---HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 99999999999999999999976532 11 7889999999999999999999876
No 77
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.78 E-value=3.2e-18 Score=126.20 Aligned_cols=131 Identities=15% Similarity=0.168 Sum_probs=109.4
Q ss_pred CCHHHHHHHHhhhcC-----CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCccc
Q psy8447 72 LDRVVFRELLHNTFD-----LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFIT 146 (229)
Q Consensus 72 i~~~ef~~~l~~~~~-----~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~ 146 (229)
|+..+|..++..++. .++..+ +..+|+.+|.+++|.|+|+||+.++... ..++.+|+.+|.+++|+|+
T Consensus 16 i~~~el~~~l~~lg~~~~~~~~~~~~-~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~ 88 (165)
T 1k94_A 16 VDAEELQRCLTQSGINGTYSPFSLET-CRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTVE 88 (165)
T ss_dssp BCHHHHHHHHHHHTTTTTSCCCCHHH-HHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBCC
T ss_pred CCHHHHHHHHHHhccccCCCCCCHHH-HHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceEC
Confidence 999999999999875 234444 7899999999999999999999988764 6789999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccCCChHHHH
Q psy8447 147 REEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 147 ~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (229)
.+|+..++..++.. .+++. ++.++..+ +++|.|+|+||..++...+.+.++|....+...|..
T Consensus 89 ~~el~~~l~~~g~~-----~~~~~----~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i 151 (165)
T 1k94_A 89 HHELRQAIGLMGYR-----LSPQT----LTTIVKRY--SKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSA 151 (165)
T ss_dssp HHHHHHHHHHTTCC-----CCHHH----HHHHHHHH--CBTTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEE
T ss_pred HHHHHHHHHHhCCC-----CCHHH----HHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 99999999876432 23433 55666666 889999999999999999999999999887766643
No 78
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.78 E-value=2.4e-18 Score=128.87 Aligned_cols=142 Identities=18% Similarity=0.208 Sum_probs=104.2
Q ss_pred HHHHHhccCccCCCC-CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHc---cCCCCceeHHHHHHHHHhhccCChHHHHHH
Q psy8447 57 VTERYKGFSPFSFQG-LDRVVFRELLHNTFDLVTEEILMERIFCAFD---RLCDGVIHLDEWVLGLSCFLRGTNEELIKF 132 (229)
Q Consensus 57 ~~~l~~~f~~~d~~~-i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d---~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~ 132 (229)
+.++.+.|..+|.++ |+..+|..++ +..++ ...+..+|..+| .+++|.|+|.+|+.++..+......+.++.
T Consensus 27 ~~~~~~~F~~~D~dG~I~~~el~~~l---g~~~~-~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~~ 102 (179)
T 3a8r_A 27 WAAVEKRFNQLQVDGVLLRSRFGKCI---GMDGS-DEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRT 102 (179)
T ss_dssp HHHHHHHHHHHCBTTBEEGGGHHHHH---TCCSC-HHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHHHhccCCCCCCcHHHHHHHH---CCCCc-HHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHHH
Confidence 334444455544444 9999999865 33233 444788888887 467889999999999887766677889999
Q ss_pred HHHHhcCCCCCcccHHHHHHHHH-HHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChH
Q psy8447 133 TFLIYDLNNDGFITREEMFQLLR-NSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 133 ~F~~~D~~~~G~I~~~e~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
+|+.||.|++|+|+.+|+..++. .++...+ ...+...++.++.++..+|.|+||.|+|+||+.++...|.
T Consensus 103 ~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~--~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~p~ 173 (179)
T 3a8r_A 103 FFDMVDKNADGRLTAEEVKEIIALSASANKL--SKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPS 173 (179)
T ss_dssp HHHHHCTTCSSCBCHHHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC----
T ss_pred HHHHHCCCCCCcCCHHHHHHHHHHHhccccc--cccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCcc
Confidence 99999999999999999999998 6542100 0000113445889999999999999999999999998776
No 79
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.77 E-value=4.2e-18 Score=125.11 Aligned_cols=118 Identities=21% Similarity=0.215 Sum_probs=92.8
Q ss_pred CCHHHHHHHHh----hhcCCCcHHHH----------HHHHHHHHccCCCCceeHHHHHHHHHhhccCCh-------HHHH
Q psy8447 72 LDRVVFRELLH----NTFDLVTEEIL----------MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN-------EELI 130 (229)
Q Consensus 72 i~~~ef~~~l~----~~~~~~~~~~~----------~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~-------~~~~ 130 (229)
|+..+|..++. .++..++..+. +..+|..+|.+++|.|+++||+.++........ ...+
T Consensus 21 i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~ 100 (166)
T 3akb_A 21 IDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFL 100 (166)
T ss_dssp ECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHH
Confidence 88888888653 33444444332 235689999999999999999998887654332 2348
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 131 KFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 131 ~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
+.+|+.+|.+++|+|+.+||..++..++ .+++ .+..++..+|.|++|.|+++||..++.
T Consensus 101 ~~~F~~~D~d~~G~i~~~E~~~~l~~~~-------~~~~----~~~~~~~~~D~d~dg~i~~~ef~~~~~ 159 (166)
T 3akb_A 101 HAALGVADTDGDGAVTVADTARALTAFG-------VPED----LARQAAAALDTDGDGKVGETEIVPAFA 159 (166)
T ss_dssp HHHHHHHCSSSSSCCBHHHHHHHHHHTT-------CCHH----HHHHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCCHHHHHHHHHHhC-------CCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 9999999999999999999999998764 2332 377899999999999999999999875
No 80
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.77 E-value=1.6e-18 Score=124.16 Aligned_cols=132 Identities=17% Similarity=0.182 Sum_probs=105.4
Q ss_pred hHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccC---ChHHHHH
Q psy8447 55 SNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG---TNEELIK 131 (229)
Q Consensus 55 ~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~---~~~~~~~ 131 (229)
.++..++..|+....+.|+..+|..++..++..++..+ +..++. +++|.|+|.||+.++...... .....++
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~-~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~ 79 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE-ITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV 79 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHH-HHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHH-HHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHHH
Confidence 34556666666554445999999999999887666655 555555 889999999999999877543 2347899
Q ss_pred HHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 132 FTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 132 ~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.+|+.+|.+++|+|+.+||..++..++... +++ .+..++..+|. ++|.|+|+||+.++..
T Consensus 80 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-----~~~----~~~~~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 80 KGFQVFDKDATGMIGVGELRYVLTSLGEKL-----SNE----EMDELLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp HHHHTTCSSCSSCCCHHHHHHHHHHHHSCS-----CHH----HHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred HHHHHhCCCCCCcEeHHHHHHHHHHcCCCC-----CHH----HHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence 999999999999999999999999875432 232 37889999999 9999999999998864
No 81
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.77 E-value=2.3e-18 Score=134.50 Aligned_cols=163 Identities=12% Similarity=0.183 Sum_probs=120.9
Q ss_pred hhhHhhcCCChhHHHHHHhccCccCC---CC-CCHHHHHHHHhhhcCCC------------cHHHHHHHHHHHHccCCCC
Q psy8447 44 PVVVQVSGLPPSNVTERYKGFSPFSF---QG-LDRVVFRELLHNTFDLV------------TEEILMERIFCAFDRLCDG 107 (229)
Q Consensus 44 ~~~~~~~~l~~~~~~~l~~~f~~~d~---~~-i~~~ef~~~l~~~~~~~------------~~~~~~~~lf~~~d~~~~g 107 (229)
..+.+.+.+.--.+..+.+.|....- +. ++..++..++..++... ....++..+|+.||.+++|
T Consensus 68 r~lq~~~~l~lv~l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G 147 (261)
T 1eg3_A 68 RRLQKALCLDLLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTG 147 (261)
T ss_dssp HHHHHHTTGGGCCHHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCS
T ss_pred HhhhhhheeceeeHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCc
Confidence 44455566665556666666554322 22 88888777766653211 2356677899999999999
Q ss_pred ceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh--cCCCC--CCChHHHHHHHHHHHHHcC
Q psy8447 108 VIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI--SHPQD--EDPDEGVRDLVELALRKMD 183 (229)
Q Consensus 108 ~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~d 183 (229)
.|+|.||+.++..++++..+++++++|++|| |++|+|++.|+..+++.+.. ....+ ......++..++.+|+.+|
T Consensus 148 ~I~f~ef~~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d 226 (261)
T 1eg3_A 148 RIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN 226 (261)
T ss_dssp EEEHHHHHHHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT
T ss_pred eEeHHHHHHHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999 99999999999999977421 00000 0011234557889999996
Q ss_pred CCCCCcccHHHHHHHHhcChHHHHHh
Q psy8447 184 YDKDGKISFQDFQQSVTDEPLLLEAF 209 (229)
Q Consensus 184 ~~~dg~Is~~ef~~~~~~~~~~~~~~ 209 (229)
+||.|+.+||++++...|.++.++
T Consensus 227 --~dg~It~~EFl~~~~~dp~il~wL 250 (261)
T 1eg3_A 227 --NKPEIEAALFLDWMRLEPQSMVWL 250 (261)
T ss_dssp --TCSCBCHHHHHHHHHTCCTTTTHH
T ss_pred --CCCcCCHHHHHHHHHhCcHHHHHH
Confidence 899999999999999999765544
No 82
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.77 E-value=1.5e-18 Score=149.86 Aligned_cols=140 Identities=21% Similarity=0.208 Sum_probs=113.3
Q ss_pred CChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcC-------CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh
Q psy8447 52 LPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFD-------LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 121 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~-------~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~ 121 (229)
++.+++..+.+.|..+|.++ |+..||..++..+.. .......+..+|+.+|.|++|.|+|+||+.++...
T Consensus 349 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 428 (504)
T 3q5i_A 349 TTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDK 428 (504)
T ss_dssp SCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH
T ss_pred CcHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhh
Confidence 46777777777777666553 999999999988732 12344558999999999999999999999998876
Q ss_pred ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 122 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 122 ~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
......+.++.+|+.||.|++|+|+.+||..++... ..+++ .++.+|+.+|.|+||.|+|+||+.+|..
T Consensus 429 ~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~-------~~~~~----~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 497 (504)
T 3q5i_A 429 QILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT-------SISEK----TWNDVLGEADQNKDNMIDFDEFVSMMHK 497 (504)
T ss_dssp HHHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCS-------CCCHH----HHHHHHHTTCSSCSSSEEHHHHHHHHHH
T ss_pred hcccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhC-------CCCHH----HHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 555667899999999999999999999999887531 12333 3788999999999999999999998875
Q ss_pred C
Q psy8447 202 E 202 (229)
Q Consensus 202 ~ 202 (229)
.
T Consensus 498 ~ 498 (504)
T 3q5i_A 498 I 498 (504)
T ss_dssp H
T ss_pred h
Confidence 3
No 83
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.77 E-value=1.5e-18 Score=149.46 Aligned_cols=139 Identities=18% Similarity=0.201 Sum_probs=111.1
Q ss_pred CChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCC-------CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh
Q psy8447 52 LPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDL-------VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 121 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~-------~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~ 121 (229)
++..+++.+.+.|..+|.++ |+..||..++..++.. ......+..+|+.+|.|++|.|+|+||+.++...
T Consensus 340 ~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~ 419 (494)
T 3lij_A 340 TSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDR 419 (494)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCH
T ss_pred ccHHHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 35666666666666655543 9999999999987542 2335558999999999999999999999998776
Q ss_pred ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 122 LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 122 ~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
......+.++.+|+.||.|++|+|+.+||..++.. ...+++ .++.+|+.+|.|+||.|+|+||+.++..
T Consensus 420 ~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~-------~~~~~~----~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 488 (494)
T 3lij_A 420 KSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL-------DHLESK----TWKEMISGIDSNNDGDVDFEEFCKMIQK 488 (494)
T ss_dssp HHHTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C-------CSCCCH----HHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred hccccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh-------cCCCHH----HHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 55567788999999999999999999999998753 122232 3788999999999999999999998864
No 84
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.76 E-value=1.8e-18 Score=148.71 Aligned_cols=140 Identities=19% Similarity=0.231 Sum_probs=97.9
Q ss_pred ChhHHHHHHhccCccCCC---CCCHHHHHHHHhhh----cCCCc---------HHHHHHHHHHHHccCCCCceeHHHHHH
Q psy8447 53 PPSNVTERYKGFSPFSFQ---GLDRVVFRELLHNT----FDLVT---------EEILMERIFCAFDRLCDGVIHLDEWVL 116 (229)
Q Consensus 53 ~~~~~~~l~~~f~~~d~~---~i~~~ef~~~l~~~----~~~~~---------~~~~~~~lf~~~d~~~~g~I~~~ef~~ 116 (229)
+..+++.+.+.|..+|.+ .|+..||..++..+ +...+ ....+..+|+.+|.|++|.|+|+||+.
T Consensus 326 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~ 405 (486)
T 3mwu_A 326 TLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIA 405 (486)
T ss_dssp CHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHH
Confidence 555566666666665554 39999997666554 32222 255589999999999999999999999
Q ss_pred HHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHH
Q psy8447 117 GLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQ 196 (229)
Q Consensus 117 ~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~ 196 (229)
++.........+.++.+|+.||.|++|+|+.+||..++..++...... .++.+|+.+|.|+||.|+|+||.
T Consensus 406 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~---------~~~~~~~~~D~d~dG~I~~~EF~ 476 (486)
T 3mwu_A 406 SAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQME---------ELESIIEQVDNNKDGEVDFNEFV 476 (486)
T ss_dssp HHSCTTTTCCHHHHHHHHHHHCSSCSSSBCSSCC-----------------------------CCCCSSCSSSBCHHHHH
T ss_pred HHHhhhccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHH---------HHHHHHHHhCCCCCCcEeHHHHH
Confidence 887776677788999999999999999999999999998775433222 37889999999999999999999
Q ss_pred HHHhc
Q psy8447 197 QSVTD 201 (229)
Q Consensus 197 ~~~~~ 201 (229)
.++..
T Consensus 477 ~~~~~ 481 (486)
T 3mwu_A 477 EMLQN 481 (486)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98763
No 85
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.76 E-value=6.5e-18 Score=145.03 Aligned_cols=139 Identities=22% Similarity=0.234 Sum_probs=107.1
Q ss_pred ChhHHHHHHhccCccCCC---CCCHHHHHHHHhhh----cCCCc------HHHHHHHHHHHHccCCCCceeHHHHHHHHH
Q psy8447 53 PPSNVTERYKGFSPFSFQ---GLDRVVFRELLHNT----FDLVT------EEILMERIFCAFDRLCDGVIHLDEWVLGLS 119 (229)
Q Consensus 53 ~~~~~~~l~~~f~~~d~~---~i~~~ef~~~l~~~----~~~~~------~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~ 119 (229)
++.++..+.+.|..+|.+ .|+..||..++... +...+ ....+..+|+.+|.|++|.|+|+||+.++.
T Consensus 330 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~ 409 (484)
T 3nyv_A 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAM 409 (484)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 444555555555555544 39999996655544 33333 145578999999999999999999999988
Q ss_pred hhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy8447 120 CFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSV 199 (229)
Q Consensus 120 ~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~ 199 (229)
........+.++.+|+.||.|++|+|+.+||..++... ..+++ .++.+|+.+|.|+||.|+|+||+.++
T Consensus 410 ~~~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~-------~~~~~----~~~~~~~~~D~d~dG~i~~~Ef~~~~ 478 (484)
T 3nyv_A 410 DRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVS-------DVDSE----TWKSVLSEVDKNNDGEVDFDEFQQML 478 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT-------TCCHH----HHHHHHHHHCTTCCSEEEHHHHHHHH
T ss_pred hccccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhc-------CCCHH----HHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence 77555667889999999999999999999999998751 12232 37889999999999999999999988
Q ss_pred hcC
Q psy8447 200 TDE 202 (229)
Q Consensus 200 ~~~ 202 (229)
...
T Consensus 479 ~~~ 481 (484)
T 3nyv_A 479 LKL 481 (484)
T ss_dssp HHT
T ss_pred Hhh
Confidence 753
No 86
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.76 E-value=5.1e-18 Score=133.96 Aligned_cols=166 Identities=19% Similarity=0.217 Sum_probs=123.3
Q ss_pred hhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcH-----HHHHHHHHHHHccCCCCceeHHHHHHHHHhh-------
Q psy8447 54 PSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTE-----EILMERIFCAFDRLCDGVIHLDEWVLGLSCF------- 121 (229)
Q Consensus 54 ~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~-----~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~------- 121 (229)
..+++.++..|+....+.|+..+|..++..++..++. ...+..+|..+|.+++|.|+|.||+.++...
T Consensus 15 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~ 94 (263)
T 2f33_A 15 ASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLF 94 (263)
T ss_dssp HHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTTHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhhHHHHH
Confidence 3444445555544333449999999999987543332 1457899999999999999999999987643
Q ss_pred --ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy8447 122 --LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSV 199 (229)
Q Consensus 122 --~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~ 199 (229)
......+.++.+|..+|.+++|+|+.+||..++..++... ....++..+...+..++..+|.+++|.|+|+||..++
T Consensus 95 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~ 173 (263)
T 2f33_A 95 RCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKA-NKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLL 173 (263)
T ss_dssp GGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHH-TSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHS
T ss_pred HHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHH
Confidence 3445677899999999999999999999999998873210 1223555666667779999999999999999999988
Q ss_pred hcC--------------hHHHHHhcccCCChHHHH
Q psy8447 200 TDE--------------PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 200 ~~~--------------~~~~~~~~~~~~~~~~~~ 220 (229)
... ..+..+|..+.....|..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i 208 (263)
T 2f33_A 174 PVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYI 208 (263)
T ss_dssp CTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCE
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcc
Confidence 641 345667777766655543
No 87
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.74 E-value=1.1e-17 Score=120.60 Aligned_cols=113 Identities=15% Similarity=0.103 Sum_probs=94.3
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc-cCChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~-~~~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
|+..+|..++..++..++..+ +..++..+|.+ |+|.||+.++.... .......++.+|+.||.+++|+|+.+||
T Consensus 32 i~~~el~~~l~~~g~~~~~~~-~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el 106 (146)
T 2qac_A 32 ISIDNASYNARKLGLAPSSID-EKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQM 106 (146)
T ss_dssp EEHHHHHHHHHHTTCCCCHHH-HHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHHHHTTCTTCSSEEEHHHH
T ss_pred ccHHHHHHHHHHhCCCCCHHH-HHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999999999999887666665 78999999887 99999999998654 3456788999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..++..++. ..+++. +..++..+ +++|.|+|+||+.++.
T Consensus 107 ~~~l~~~g~-----~~~~~~----~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 107 KNILTTWGD-----ALTDQE----AIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp HHHHHHSSS-----CCCHHH----HHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HHHHHHhCC-----CCCHHH----HHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 999987643 234443 56677777 8999999999999875
No 88
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.74 E-value=1.5e-17 Score=148.63 Aligned_cols=132 Identities=17% Similarity=0.249 Sum_probs=111.9
Q ss_pred CCHHHHHHHHhhh--------cCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCC
Q psy8447 72 LDRVVFRELLHNT--------FDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDG 143 (229)
Q Consensus 72 i~~~ef~~~l~~~--------~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G 143 (229)
|+..+|..++..+ +...+..+ ++.+|..+|.|++|.|+|+||+.++..+ +.++.+|+.||.|++|
T Consensus 548 Is~~El~~~L~~l~~~~~~~~g~~~s~~~-~~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG 620 (714)
T 3bow_A 548 ISAFELQTILRRVLAKREDIKSDGFSIET-CKIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSG 620 (714)
T ss_dssp BCHHHHHHHHHHHHTTCTTSCCSCCCHHH-HHHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCS
T ss_pred CCHHHHHHHHHHHhhhcccccCCCCCHHH-HHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 9999999999986 33445444 7899999999999999999999998865 6789999999999999
Q ss_pred cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccCCChHHHH
Q psy8447 144 FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 144 ~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (229)
+|+.+||..++..++... ++ +.++.++..+| ++||.|+|+||+.++...+.+.++|....+.+.|..
T Consensus 621 ~Is~~El~~~L~~~G~~l-----s~----~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~~F~~~D~d~dG~I 687 (714)
T 3bow_A 621 TMNSYEMRKALEEAGFKL-----PC----QLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTI 687 (714)
T ss_dssp SEEHHHHHHHHHHTTEEC-----CH----HHHHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHHHHSSSCSSCCSEE
T ss_pred eECHHHHHHHHHHcCCCC-----CH----HHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCcE
Confidence 999999999998875433 22 24778899999 999999999999999998899999998887776644
No 89
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.73 E-value=2.1e-17 Score=131.01 Aligned_cols=187 Identities=11% Similarity=0.067 Sum_probs=133.5
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHh----hcC----CChhHHHHHH----hccCccCCCCCCHHHHH
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQ----VSG----LPPSNVTERY----KGFSPFSFQGLDRVVFR 78 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~----~~~----l~~~~~~~l~----~~f~~~d~~~i~~~ef~ 78 (229)
..+++.++..++..|..++.+++|. +...++....+ ..+ ++..++..+. ..++....+.|+..+|.
T Consensus 3 ~~~~~~~~~~l~~~F~~~D~d~~G~--i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~ 80 (272)
T 2be4_A 3 SAFANLDAAGFLQIWQHFDADDNGY--IEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELA 80 (272)
T ss_dssp CCCCCCCHHHHHHHHHHHCTTCCSE--EEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHH
T ss_pred HHHHhcCHHHHHHHHHHhcCCCCCC--cCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHH
Confidence 3455556667888899998777665 88888887766 444 4677777655 33443333349999999
Q ss_pred HH-----------HhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh----ccCChHHHH----HHHHHHhcC
Q psy8447 79 EL-----------LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF----LRGTNEELI----KFTFLIYDL 139 (229)
Q Consensus 79 ~~-----------l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~----~~~~~~~~~----~~~F~~~D~ 139 (229)
.+ +.......+..+ +..+|+.+|.+++|.|+..||..++..+ ....+...+ ..+|..+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~ 159 (272)
T 2be4_A 81 NMILPQEENFLLIFRREAPLDNSVE-FMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDK 159 (272)
T ss_dssp HHHSCHHHHHHHHHHHHSCCCCHHH-HHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCS
T ss_pred HHHhhhhHHHHHHHhhccCcccHHH-HHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhcc
Confidence 99 444443344444 7899999999999999999999999877 444555444 559999999
Q ss_pred CCCCcccHHHHHHHHHHHhhcCCCCC---CChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 140 NNDGFITREEMFQLLRNSLISHPQDE---DPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 140 ~~~G~I~~~e~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
+++|.|+++||..++...-....... .......+.+..+|+.+|.+++|.|+.+||..++.
T Consensus 160 ~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~ 223 (272)
T 2be4_A 160 NKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVK 223 (272)
T ss_dssp SCSSEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence 99999999999887642000000000 01123344688999999999999999999999885
No 90
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.72 E-value=9.6e-17 Score=119.58 Aligned_cols=142 Identities=13% Similarity=0.113 Sum_probs=115.2
Q ss_pred CCCCCCCchhhhHhhc--------CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCC
Q psy8447 35 AGVPISTSTPVVVQVS--------GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCD 106 (229)
Q Consensus 35 ~~~~~~~~~~~~~~~~--------~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~ 106 (229)
.|.+...++..+.+.. +++..+++.++..++....+.|+..+|..++... ..+..+|+.|| |++
T Consensus 18 dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~-------~~l~~aF~~fD-d~~ 89 (174)
T 2i7a_A 18 GSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL-------VHYQHVFQKVQ-TSP 89 (174)
T ss_dssp CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH-------HHHHHHHHHHC-SBT
T ss_pred CCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHhc-CCC
Confidence 3335555555544443 4677889999999887666669999999987753 23788999999 999
Q ss_pred CceeHHHHHHHHHhh----ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHc
Q psy8447 107 GVIHLDEWVLGLSCF----LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM 182 (229)
Q Consensus 107 g~I~~~ef~~~~~~~----~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (229)
|.|+..||..++..+ ....+.+.++.++..+| +++|.|+++||..++... +.+..+|+.+
T Consensus 90 G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~---------------~~~~~~F~~~ 153 (174)
T 2i7a_A 90 GVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL---------------EAMAKTFRNL 153 (174)
T ss_dssp TBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH---------------HHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH---------------HHHHHHHHHh
Confidence 999999999999988 66678889999999999 999999999999998653 1377899999
Q ss_pred CCCCCC-cccHHHHHHHHh
Q psy8447 183 DYDKDG-KISFQDFQQSVT 200 (229)
Q Consensus 183 d~~~dg-~Is~~ef~~~~~ 200 (229)
|++++| .++++||+.++.
T Consensus 154 D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 154 SKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp CSSSSCCCCCHHHHHHHHH
T ss_pred CCCCCCceecHHHHHHHHH
Confidence 999999 449999998754
No 91
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.70 E-value=1.4e-17 Score=135.83 Aligned_cols=153 Identities=14% Similarity=0.156 Sum_probs=118.9
Q ss_pred cCCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCCh
Q psy8447 50 SGLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 126 (229)
Q Consensus 50 ~~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 126 (229)
..+++.++..+...|..+|.++ |+..+|..++..++..++... +..+|..+|.+++|.|+|.+|+.+.. .
T Consensus 114 ~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~-i~~l~~~~D~d~~G~I~f~ef~~l~~------~ 186 (323)
T 1ij5_A 114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGP-LKKLFVMVENDTKGRMSYITLVAVAN------D 186 (323)
T ss_dssp CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSH-HHHHHHHHHHCCSSTHHHHHHTTSHH------H
T ss_pred HhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHH-HHHHHHHhcCCCCCcCcHHHHHhhhh------H
Confidence 3578888888888888887653 999999999999877666555 68899999999999999998876542 2
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHH-HHHHcCCCCCCcccHHHHHHHHhcChHH
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVEL-ALRKMDYDKDGKISFQDFQQSVTDEPLL 205 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~dg~Is~~ef~~~~~~~~~~ 205 (229)
...+..+|..||.+++|+|+.+||..++ ++... ++. .+.. ++..+|.+++|.|+|++|..++...+.+
T Consensus 187 ~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~-----~~~----ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~l 255 (323)
T 1ij5_A 187 LAALVADFRKIDTNSNGTLSRKEFREHF--VRLGF-----DKK----SVQDALFRYADEDESDDVGFSEYVHLGLCLLVL 255 (323)
T ss_dssp HHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTC-----CCH----HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCC-----CHH----HHHHHHHHHhcCCCCCEEeHHHHHHHHHHHHHH
Confidence 3457778999999999999999999888 43322 111 2677 8888888888888888888888877777
Q ss_pred HHHhcccCCChHHHH
Q psy8447 206 LEAFGQCLPSDAARQ 220 (229)
Q Consensus 206 ~~~~~~~~~~~~~~~ 220 (229)
..+|..+.....|..
T Consensus 256 ~~~F~~~D~d~dG~I 270 (323)
T 1ij5_A 256 RILYAFADFDKSGQL 270 (323)
T ss_dssp HHHHHHTCSSSCSSE
T ss_pred HHHHHHhCCCCCCCc
Confidence 778877776655543
No 92
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.70 E-value=2e-18 Score=129.59 Aligned_cols=118 Identities=16% Similarity=0.164 Sum_probs=88.2
Q ss_pred CCHHHHHHHHhhh------cCCCcHHHHHHHH---------HHHHccCCCCceeHHHHHHHHHhhccC-ChHHHHHHHH-
Q psy8447 72 LDRVVFRELLHNT------FDLVTEEILMERI---------FCAFDRLCDGVIHLDEWVLGLSCFLRG-TNEELIKFTF- 134 (229)
Q Consensus 72 i~~~ef~~~l~~~------~~~~~~~~~~~~l---------f~~~d~~~~g~I~~~ef~~~~~~~~~~-~~~~~~~~~F- 134 (229)
|+..+|..++..+ +..++..+ +..+ |+.+|.+++|.|+|.| .++...... ...+.+..+|
T Consensus 31 i~~~El~~~l~~~~~~~~~g~~~~~~~-~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~~~~~~~~~~~~~~~~~f~ 107 (186)
T 2hps_A 31 ISREDYELIAVRIAKIAKLSAEKAEET-RQEFLRVADQLGLAPGVRISVEEAAVNAT--DSLLKMKGEEKAMAVIQSLIM 107 (186)
T ss_dssp EEHHHHHHHHHHHHHHHTCCHHHHHHH-HHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHHHHCCTHHHHHTTHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCCCcHH-HHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHHHHhcCChHHHHHHHHHHH
Confidence 8999999998765 33333344 5555 5899999999999999 444433221 1223455666
Q ss_pred -HHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 135 -LIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 135 -~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
..||.+++|+|+.+||..++..++.. .+++ .+..+|+.+|.|++|.|+|+||+.++..
T Consensus 108 ~~~fD~d~~G~I~~~E~~~~l~~~g~~-----~~~~----~~~~~~~~~D~d~dG~i~~~ef~~~~~~ 166 (186)
T 2hps_A 108 YDCIDTDKDGYVSLPEFKAFLQAVGPD-----LTDD----KAITCFNTLDFNKNGQISRDEFLVTVND 166 (186)
T ss_dssp HHHHCTTCSSEEEHHHHHHHHHHHCTT-----CCHH----HHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred HHHccCCCCCcCCHHHHHHHHHHhCCC-----CCHH----HHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 88899999999999999999887432 2333 3788999999999999999999998763
No 93
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.69 E-value=6.4e-17 Score=111.05 Aligned_cols=104 Identities=23% Similarity=0.316 Sum_probs=84.2
Q ss_pred CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCC
Q psy8447 86 DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDE 165 (229)
Q Consensus 86 ~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~ 165 (229)
..++..+ +..+|+.+| ++|.|+|+||+.++.. .....+.++.+|+.||.+++|+|+.+|+..++..++. ....
T Consensus 5 ~~~~~~e-i~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~--~~~~ 77 (109)
T 3fs7_A 5 DILSAKD-IESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSS--SARV 77 (109)
T ss_dssp GTSCHHH-HHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCT--TSCC
T ss_pred CcCCHHH-HHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhc--cccc
Confidence 3355555 789999998 7999999999999865 3456788999999999999999999999999876621 0122
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 166 DPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 166 ~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
.+++ .++.+++.+|.+++|.|+|+||+.++.
T Consensus 78 ~~~~----~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 78 LTSA----ETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCHH----HHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred CCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 2333 378899999999999999999999875
No 94
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.68 E-value=1.5e-16 Score=109.22 Aligned_cols=103 Identities=23% Similarity=0.367 Sum_probs=83.9
Q ss_pred CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCC
Q psy8447 88 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP 167 (229)
Q Consensus 88 ~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~ 167 (229)
++..+ ++.+++.+|. +|.|+|.||+.++.. .....+.++.+|+.||.+++|+|+.+|+..++..++. .....+
T Consensus 6 ~s~~e-i~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~--~g~~~~ 78 (109)
T 5pal_A 6 LKADD-INKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSA--HGRDLN 78 (109)
T ss_dssp SCHHH-HHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCT--TCCCCC
T ss_pred CCHHH-HHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH--cCCCCC
Confidence 45555 7899999987 899999999998864 3456788999999999999999999999999988721 011223
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 168 DEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
++ .++.+++.+|.+++|.|+|+||..++..
T Consensus 79 ~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 79 DT----ETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HH----HHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HH----HHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 33 3778999999999999999999998864
No 95
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.68 E-value=6.7e-16 Score=117.79 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=112.8
Q ss_pred CCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccC-CCCceeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccH
Q psy8447 70 QGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRL-CDGVIHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITR 147 (229)
Q Consensus 70 ~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~-~~g~I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~ 147 (229)
+.|+..++..++..++ .+..+ +..+|..||.+ ++|.|+++||..++..+... .+...+..+|+.+|.+++|.|+.
T Consensus 14 g~l~~~el~~~~~~~~--~~~~~-i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~ 90 (207)
T 2d8n_A 14 GALSKEILEELQLNTK--FSEEE-LCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDF 90 (207)
T ss_dssp TCCCHHHHHHHHHHSS--CCHHH-HHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEH
T ss_pred CCCCHHHHHHHHHHcC--CCHHH-HHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeH
Confidence 3499999999998865 35555 78999999998 79999999999999987653 66788999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC--------------------hHHHH
Q psy8447 148 EEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE--------------------PLLLE 207 (229)
Q Consensus 148 ~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~--------------------~~~~~ 207 (229)
+||..++..++...... .+..+|+.+|.+++|.|+++||..++... ..+..
T Consensus 91 ~Ef~~~~~~~~~~~~~~---------~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 161 (207)
T 2d8n_A 91 KEYVIALHMTTAGKTNQ---------KLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEK 161 (207)
T ss_dssp HHHHHHHHHHSCSSSST---------THHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHH---------HHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHH
Confidence 99999998775432222 27789999999999999999999988762 12556
Q ss_pred HhcccCCChHHHHH
Q psy8447 208 AFGQCLPSDAARQS 221 (229)
Q Consensus 208 ~~~~~~~~~~~~~~ 221 (229)
+|....+...|..+
T Consensus 162 ~f~~~D~d~dG~I~ 175 (207)
T 2d8n_A 162 IWKYFGKNDDDKLT 175 (207)
T ss_dssp HHHHTTCCTTCCEE
T ss_pred HHHHcCCCCCCcCc
Confidence 67666665555443
No 96
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.67 E-value=2.5e-16 Score=108.05 Aligned_cols=105 Identities=17% Similarity=0.249 Sum_probs=84.1
Q ss_pred cCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCC
Q psy8447 85 FDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQD 164 (229)
Q Consensus 85 ~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~ 164 (229)
+..++..+ ++.++..+| ++|.|+|+||+.++... ....+.++.+|+.||.+++|+|+.+|+..++..++. ...
T Consensus 4 g~~~~~~e-~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~--~g~ 76 (109)
T 1bu3_A 4 SGILADAD-VAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSA--GAR 76 (109)
T ss_dssp SCSSCHHH-HHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHST--TCC
T ss_pred cccCCHHH-HHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcc--cCC
Confidence 34455555 788999998 88999999999987543 355778999999999999999999999999998731 011
Q ss_pred CCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 165 EDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..+++ .++.+++.+|.+++|.|+|+||..++.
T Consensus 77 ~~~~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 77 ALTDA----ETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CCCHH----HHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred CCCHH----HHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 22333 377899999999999999999999875
No 97
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.67 E-value=9.6e-16 Score=115.45 Aligned_cols=158 Identities=17% Similarity=0.094 Sum_probs=113.3
Q ss_pred CcCcHHHHHHHHHHHHHHhhc-CCCCCCCCCCchhhhHhhcCC---ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC
Q psy8447 11 PLSFRQEVETLCKIFKKLLNS-SSNAGVPISTSTPVVVQVSGL---PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD 86 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~-~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~ 86 (229)
+.++++++..+...|. .+ ++| .++..++..+....+. +...+..++..++....+.|+..+|..++...+.
T Consensus 20 ~~~~~~~i~~~f~~fd---~~~~~G--~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~ 94 (193)
T 1bjf_A 20 TDFTEHEIQEWYKGFL---RDCPSG--HLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR 94 (193)
T ss_dssp SSCCHHHHHHHHHHHH---HHSTTS--EEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTS
T ss_pred cCCCHHHHHHHHHHHH---HHCCCC--CcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcC
Confidence 6788888877655554 33 343 3666777766665544 2356778888888766666999999999988766
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc------------CChHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR------------GTNEELIKFTFLIYDLNNDGFITREEMFQLL 154 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~------------~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l 154 (229)
..+ ...+..+|+.+|.+++|.|+++||..++..+.. ......+..+|+.+|.|++|.|+++||..++
T Consensus 95 ~~~-~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~ 173 (193)
T 1bjf_A 95 GKL-EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGA 173 (193)
T ss_dssp SCH-HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHH
T ss_pred CCH-HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence 444 444789999999999999999999999976421 1335679999999999999999999999998
Q ss_pred HHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q psy8447 155 RNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKI 190 (229)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~I 190 (229)
..- + .+..++ .+|.+++|.|
T Consensus 174 ~~~----------~-----~~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 174 KSD----------P-----SIVRLL-QCDPSSAGQF 193 (193)
T ss_dssp HHC----------T-----HHHHTT-CC--------
T ss_pred hcC----------H-----HHHHHh-ccCCCCCCCC
Confidence 531 1 266788 9999999976
No 98
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.66 E-value=2.5e-15 Score=116.09 Aligned_cols=128 Identities=14% Similarity=0.089 Sum_probs=110.9
Q ss_pred CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHH
Q psy8447 51 GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELI 130 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 130 (229)
.++..++..++..++....+.|+..+|..++... ..+..+|+.+|.|++|.|+.+||..++..+....+.+.+
T Consensus 83 ~~~~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~ 155 (220)
T 3sjs_A 83 RLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM-------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTS 155 (220)
T ss_dssp CCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHH
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHH
Confidence 3677889999999987777779999999998864 337889999999999999999999999998888888899
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHc-CCCCCC------cccHHHHHHHHhc
Q psy8447 131 KFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKM-DYDKDG------KISFQDFQQSVTD 201 (229)
Q Consensus 131 ~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~dg------~Is~~ef~~~~~~ 201 (229)
..+|+.+| |++|.|+++||..++..+. .+..+|+.+ |.+++| .|+++||+.++..
T Consensus 156 ~~l~~~~d-d~dg~I~~~eF~~~~~~l~---------------~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 156 LLLHRLFA-RGMAFCDLNCWIAICAFAA---------------QTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHHHHHHC---CCSEEHHHHHHHHHHHH---------------HHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhc-CCCCcCcHHHHHHHHHHHH---------------HHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 99999999 9999999999999997652 267799999 999999 8899999987753
No 99
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.66 E-value=1.1e-15 Score=116.16 Aligned_cols=144 Identities=17% Similarity=0.071 Sum_probs=118.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC---
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD--- 86 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~--- 86 (229)
.+.++++++..++..|..++.+++|. +...++..+ ...+.++. +..++..++....+.|+..+|..++.....
T Consensus 20 ~~~ls~~~~~~l~~~F~~~D~d~dG~--I~~~El~~~-~~lg~~~~-~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~ 95 (202)
T 2bec_A 20 ETGFSQASLLRLHHRFRALDRNKKGY--LSRMDLQQI-GALAVNPL-GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVED 95 (202)
T ss_dssp HHCCCHHHHHHHHHHHHHHCSSCSSC--CCHHHHHTC-HHHHHSTT-HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCH
T ss_pred ccCCCHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHH-HhcCCCcc-HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccch
Confidence 35789999999999999999877765 776777666 55555544 888888888776667999999999988754
Q ss_pred -------------CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh-ccCChHHHHHHHHHH----hcCCCCCcccHH
Q psy8447 87 -------------LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEELIKFTFLI----YDLNNDGFITRE 148 (229)
Q Consensus 87 -------------~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~-~~~~~~~~~~~~F~~----~D~~~~G~I~~~ 148 (229)
.......+..+|+.+|.+++|.|+.+||..++..+ ....+.+.+..+|.. +|.|++|.|+++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~ 175 (202)
T 2bec_A 96 EDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFV 175 (202)
T ss_dssp HHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHH
T ss_pred hcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHH
Confidence 34455668999999999999999999999999988 666677777777777 999999999999
Q ss_pred HHHHHHHHH
Q psy8447 149 EMFQLLRNS 157 (229)
Q Consensus 149 e~~~~l~~~ 157 (229)
||..++...
T Consensus 176 EF~~~~~~~ 184 (202)
T 2bec_A 176 EFTKSLEKM 184 (202)
T ss_dssp HHHHTTTTS
T ss_pred HHHHHHHHh
Confidence 999988654
No 100
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.66 E-value=2.4e-16 Score=108.00 Aligned_cols=102 Identities=19% Similarity=0.263 Sum_probs=82.1
Q ss_pred CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCC
Q psy8447 88 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP 167 (229)
Q Consensus 88 ~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~ 167 (229)
++..+ +..+++.+| ++|.|+|+||+.++... ....+.++.+|+.||.+++|+|+.+||..++..++. .....+
T Consensus 6 ~~~~e-~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~--~g~~~~ 78 (108)
T 2pvb_A 6 LKDAD-VAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSP--SARALT 78 (108)
T ss_dssp SCHHH-HHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCT--TSCCCC
T ss_pred CCHHH-HHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhc--cCCCCC
Confidence 44445 788999998 78999999999988542 456778999999999999999999999999977631 011223
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 168 DEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
++ .+..++..+|.+++|.|+|+||..++.
T Consensus 79 ~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 79 DA----ETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HH----HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HH----HHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 33 377899999999999999999999875
No 101
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.65 E-value=2.4e-16 Score=108.08 Aligned_cols=103 Identities=19% Similarity=0.297 Sum_probs=83.4
Q ss_pred CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCC
Q psy8447 88 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP 167 (229)
Q Consensus 88 ~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~ 167 (229)
++..+ ++.+++.+| ++|.|+|+||+.++... ....+.++.+|+.||.+++|+|+.+||..++..++.. ....+
T Consensus 6 ~t~~e-~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~--g~~~~ 78 (109)
T 1rwy_A 6 LSAED-IKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSD--ARDLS 78 (109)
T ss_dssp SCHHH-HHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTT--CCCCC
T ss_pred CCHHH-HHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhcc--CCCCC
Confidence 45555 688999988 88999999999988542 4566889999999999999999999999999987310 11223
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 168 DEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
++ .++.+++.+|.+++|.|+|+||..++..
T Consensus 79 ~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 79 AK----ETKTLMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp HH----HHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred HH----HHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence 33 3778999999999999999999998764
No 102
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.65 E-value=6.1e-17 Score=115.66 Aligned_cols=112 Identities=13% Similarity=0.055 Sum_probs=68.0
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVR 172 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~ 172 (229)
.+.+|..+|.+++|.|+|+||+.++...... ...+.++.+|+.||.+++|+|+.+||..++..++. ...+++
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~----~~~~~~--- 77 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI----EGMSKE--- 77 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTC----CCCCHH---
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCC----CCCCHH---
Confidence 5778999999999999999999988764432 34578999999999999999999999999987642 122333
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHhcC-hHHHHHhcccC
Q psy8447 173 DLVELALRKMDYDKDGKISFQDFQQSVTDE-PLLLEAFGQCL 213 (229)
Q Consensus 173 ~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~-~~~~~~~~~~~ 213 (229)
.++.+++.+|.+++|.|+|+||+.++... +.+......++
T Consensus 78 -e~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~l 118 (135)
T 3h4s_E 78 -DAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWL 118 (135)
T ss_dssp -HHHHHHHHHCSSCSSSBCHHHHHHHHHHHHHHHHHHGGGGT
T ss_pred -HHHHHHHHhCCCCCCCCcHHHHHHHHHHhCHHHHHHHHHHH
Confidence 37889999999999999999999998754 34555555544
No 103
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.64 E-value=3.6e-16 Score=107.39 Aligned_cols=103 Identities=20% Similarity=0.329 Sum_probs=83.0
Q ss_pred CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCC
Q psy8447 88 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDP 167 (229)
Q Consensus 88 ~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~ 167 (229)
++..+ ++.+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||.+++|+|+.+|+..++..++. .....+
T Consensus 7 ~t~~e-~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~--~g~~~~ 79 (110)
T 1pva_A 7 LKADD-IKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAA--DGRDLT 79 (110)
T ss_dssp SCHHH-HHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCT--TCCCCC
T ss_pred CCHHH-HHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhh--cCCCCC
Confidence 45555 788999998 8899999999998843 3456788999999999999999999999999987631 011223
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 168 DEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 168 ~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
++ .++.+++.+|.+++|.|+|+||..++..
T Consensus 80 ~~----~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 80 DA----ETKAFLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp HH----HHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred HH----HHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence 33 3778999999999999999999998764
No 104
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.63 E-value=4.6e-16 Score=106.56 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=82.5
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCC
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDED 166 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~ 166 (229)
.++..+ ++.+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||.+++|+|+.+|+..++..++. .....
T Consensus 5 ~~t~~e-~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~--~g~~~ 77 (108)
T 1rro_A 5 ILSAED-IAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS--DAREL 77 (108)
T ss_dssp TSCHHH-HHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCT--TSCCC
T ss_pred cCCHHH-HHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhh--ccCCC
Confidence 355555 788999998 8899999999998853 2455678999999999999999999999999977631 01122
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 167 PDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 167 ~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
+++ .++.+++.+|.+++|.|+|+||+.++.
T Consensus 78 ~~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 78 TES----ETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CHH----HHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CHH----HHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 333 377899999999999999999999875
No 105
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.63 E-value=9.8e-16 Score=114.51 Aligned_cols=136 Identities=15% Similarity=0.195 Sum_probs=104.3
Q ss_pred CHHHHHHHHhhhcCCCcHHHHHHHHHHHHcc-CCCCceeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccHHHH
Q psy8447 73 DRVVFRELLHNTFDLVTEEILMERIFCAFDR-LCDGVIHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITREEM 150 (229)
Q Consensus 73 ~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~-~~~g~I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~e~ 150 (229)
++.++..+..... .+..+ +..++..||. +++|.|++.||..++..+... .+...++.+|..+|.+++|.|+.+||
T Consensus 2 ~~~el~~l~~~~~--~s~~~-i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef 78 (183)
T 1s6c_A 2 RPEGLEQLEAQTN--FTKRE-LQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 78 (183)
T ss_dssp ----CHHHHHHSS--CCHHH-HHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred ChHHHHHHHHhcC--CCHHH-HHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence 4556666766543 45555 6889999998 899999999999999988654 67788999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC------------------hHHHHHhccc
Q psy8447 151 FQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE------------------PLLLEAFGQC 212 (229)
Q Consensus 151 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------------------~~~~~~~~~~ 212 (229)
..++..++... ..+.+..+|+.+|.+++|.|+++||..++... ..+..+|...
T Consensus 79 ~~~~~~~~~~~---------~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~ 149 (183)
T 1s6c_A 79 VTALSILLRGT---------VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 149 (183)
T ss_dssp HHHHHHHHHCC---------HHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHH
T ss_pred HHHHHHHcCCC---------HHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHh
Confidence 99998765321 23358889999999999999999999998652 3355566666
Q ss_pred CCChHHHH
Q psy8447 213 LPSDAARQ 220 (229)
Q Consensus 213 ~~~~~~~~ 220 (229)
.....|..
T Consensus 150 D~d~dG~i 157 (183)
T 1s6c_A 150 DKNKDGIV 157 (183)
T ss_dssp CTTCSSEE
T ss_pred CCCCCCcE
Confidence 55554544
No 106
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=99.63 E-value=2.4e-16 Score=113.65 Aligned_cols=106 Identities=14% Similarity=0.170 Sum_probs=57.0
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhcc-----CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcC---CCCC
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLR-----GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISH---PQDE 165 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-----~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~---~~~~ 165 (229)
...+|..+|.|++|.|+++||+.++..... ..+.+.++.+|+.||.|++|+|+.+||..++..++... ....
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~ 108 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence 456899999999999999999998877643 24567899999999999999999999999987763210 0133
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy8447 166 DPDEGVRDLVELALRKMDYDKDGKISFQDFQQSV 199 (229)
Q Consensus 166 ~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~ 199 (229)
.+++.+...+..+|+.+|.|+||.|+++||+.++
T Consensus 109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 5667777778888999999999999999998765
No 107
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.62 E-value=7.1e-15 Score=108.97 Aligned_cols=157 Identities=18% Similarity=0.190 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhh----------cCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC
Q psy8447 17 EVETLCKIFKKLLNSSSNAGVPISTSTPVVVQV----------SGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD 86 (229)
Q Consensus 17 ~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~----------~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~ 86 (229)
++..++..|..++ +++|. ++..++..+.+. ..++..++..++..++....+.|+..+|..++...
T Consensus 2 ~~~~l~~~F~~~D-d~~G~--i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-- 76 (173)
T 1alv_A 2 EVRQFRRLFAQLA-GDDME--VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI-- 76 (173)
T ss_dssp HHHHHHHHHHHHH-GGGTS--BCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH--
T ss_pred chhHHHHHHHHHh-CCCCC--cCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH--
Confidence 5778999999998 77665 777777766655 35678899999999987777779999999988753
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCC
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDED 166 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~ 166 (229)
..+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+| +++|.|+++||..++...
T Consensus 77 -----~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~--------- 141 (173)
T 1alv_A 77 -----KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL--------- 141 (173)
T ss_dssp -----HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH---------
T ss_pred -----HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH---------
Confidence 33788999999999999999999999998887788899999999999 999999999999998753
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 167 PDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 167 ~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..+..+|+.+|.+++|.|+.+ |.+++.
T Consensus 142 ------~~~~~~F~~~D~d~~G~i~~~-~~~~l~ 168 (173)
T 1alv_A 142 ------DAMFRAFKSLDKDGTGQIQVN-IQEWLQ 168 (173)
T ss_dssp ------HHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred ------HHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence 237889999999999999876 666553
No 108
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.62 E-value=1.5e-14 Score=108.69 Aligned_cols=143 Identities=17% Similarity=0.128 Sum_probs=112.2
Q ss_pred CcCcHHHHHHHHHH-----------HHHHhhc-CCCCCCCCCCchhhhHhhcC---CChhHHHHHHhccCccCCCCCCHH
Q psy8447 11 PLSFRQEVETLCKI-----------FKKLLNS-SSNAGVPISTSTPVVVQVSG---LPPSNVTERYKGFSPFSFQGLDRV 75 (229)
Q Consensus 11 ~~~~~~~i~~l~~~-----------f~~l~~~-~~~~~~~~~~~~~~~~~~~~---l~~~~~~~l~~~f~~~d~~~i~~~ 75 (229)
..++++++..+.+. |..++.+ ++|. +...++..+....+ .+...+..++..++....+.|+..
T Consensus 6 ~~l~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~--i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ 83 (190)
T 2l2e_A 6 SKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGH--LNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFK 83 (190)
T ss_dssp CCSCHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCE--ECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHH
T ss_pred ccCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCc--CCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHH
Confidence 44566666666655 7777776 5554 77777777776653 334667788888887766679999
Q ss_pred HHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh------------ccCChHHHHHHHHHHhcCCCCC
Q psy8447 76 VFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF------------LRGTNEELIKFTFLIYDLNNDG 143 (229)
Q Consensus 76 ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~------------~~~~~~~~~~~~F~~~D~~~~G 143 (229)
+|..++...+...+... +..+|+.+|.+++|.|+++||..++..+ ....+.+.+..+|+.+|.|++|
T Consensus 84 ef~~~~~~~~~~~~~~~-~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG 162 (190)
T 2l2e_A 84 EFICALSVTSRGELNDK-LIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDG 162 (190)
T ss_dssp HHHHHHTTSSCSCSHHH-HHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSC
T ss_pred HHHHHHHHHcCCCHHHH-HHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCC
Confidence 99999988766545444 7899999999999999999999998773 1235678899999999999999
Q ss_pred cccHHHHHHHHHH
Q psy8447 144 FITREEMFQLLRN 156 (229)
Q Consensus 144 ~I~~~e~~~~l~~ 156 (229)
.|+++||..++..
T Consensus 163 ~I~~~Ef~~~~~~ 175 (190)
T 2l2e_A 163 QLTLEEFCEGSKR 175 (190)
T ss_dssp CBCHHHHHHHHHT
T ss_pred cCcHHHHHHHHHh
Confidence 9999999999864
No 109
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.61 E-value=1.1e-15 Score=117.19 Aligned_cols=167 Identities=17% Similarity=0.222 Sum_probs=115.0
Q ss_pred ccCcCcHHHHHHHHHHHHHHhhc-CCCCCCCCCCchhhhHhhcCCChh---HHHHHHhccCccCCCCCCHHHHHHHHhhh
Q psy8447 9 LLPLSFRQEVETLCKIFKKLLNS-SSNAGVPISTSTPVVVQVSGLPPS---NVTERYKGFSPFSFQGLDRVVFRELLHNT 84 (229)
Q Consensus 9 ~~~~~~~~~i~~l~~~f~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~---~~~~l~~~f~~~d~~~i~~~ef~~~l~~~ 84 (229)
..|+++.+++..+ |..++.+ ++| .+...++.......++++. .+..++..++....+.|+..+|..++..+
T Consensus 12 ~~t~ls~~ei~~~---f~~fD~~~~~G--~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~ 86 (211)
T 2ggz_A 12 DQKAVPTQETHVW---YRTFMMEYPSG--LQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLI 86 (211)
T ss_dssp ------------C---CCSHHHHCTTS--EEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHH---HHHHHHhCCCC--cCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHh
Confidence 3466888887665 5555544 444 3777777777777777653 36666776665555559999999999887
Q ss_pred cCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc-----cC-ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 85 FDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-----RG-TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 85 ~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~-----~~-~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
....+ ...+..+|+.+|.+++|.|+++||..++..+. .. ...+.+..+|..+|.+++|.|+++||..++...
T Consensus 87 ~~~~~-~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~- 164 (211)
T 2ggz_A 87 MQEKM-EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKD- 164 (211)
T ss_dssp SCSSH-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTT-
T ss_pred ccCch-HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhC-
Confidence 65444 44478999999999999999999999998874 23 445678999999999999999999999998631
Q ss_pred hcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 159 ISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
. . +..++.. .++|++|+.++....
T Consensus 165 -----~-----~----~~~~~~~-------~~d~~~f~~~~~~~~ 188 (211)
T 2ggz_A 165 -----Q-----D----LLEIVYK-------SFDFSNVLRVICNGK 188 (211)
T ss_dssp -----T-----T----THHHHHH-------HSCTTHHHHHHHHHC
T ss_pred -----H-----H----HHHHHhc-------cCCHHHHHHHHhcCC
Confidence 1 1 3445542 245889999988654
No 110
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.61 E-value=5.5e-15 Score=114.80 Aligned_cols=142 Identities=17% Similarity=0.143 Sum_probs=111.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhc---CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVS---GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD 86 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~ 86 (229)
.+.+|++++..+++.|...+ ++ |.+...++..+.... +.+...+..++..|+....+.|+..+|..++.....
T Consensus 58 ~~~~s~~ei~~l~~~F~~~d--~~--G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~ 133 (229)
T 3dd4_A 58 QSKFTKKELQILYRGFKNEC--PS--GVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLR 133 (229)
T ss_dssp HHHHHHHHHHHHHHHHHTTC--CS--CCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHhhC--CC--CCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcC
Confidence 36789999999999998743 33 346677777666552 234466778888888776667999999999988765
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc------------cCChHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL------------RGTNEELIKFTFLIYDLNNDGFITREEMFQLL 154 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~------------~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l 154 (229)
.. ..+.+..+|+.+|.|++|.|+++||..++..+. ...+.+.+..+|+.+|.|++|.|+++||..++
T Consensus 134 ~~-~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 212 (229)
T 3dd4_A 134 GT-VQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESC 212 (229)
T ss_dssp SC-HHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHHH
T ss_pred CC-hHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 33 445589999999999999999999999998762 23455789999999999999999999999998
Q ss_pred HH
Q psy8447 155 RN 156 (229)
Q Consensus 155 ~~ 156 (229)
..
T Consensus 213 ~~ 214 (229)
T 3dd4_A 213 QK 214 (229)
T ss_dssp HT
T ss_pred Hh
Confidence 63
No 111
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.61 E-value=1.3e-14 Score=108.39 Aligned_cols=145 Identities=20% Similarity=0.156 Sum_probs=115.4
Q ss_pred ccCcCcHHHHHHHHHHHHHHhhc-----C-CCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCC-CCHHHHHHHH
Q psy8447 9 LLPLSFRQEVETLCKIFKKLLNS-----S-SNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQG-LDRVVFRELL 81 (229)
Q Consensus 9 ~~~~~~~~~i~~l~~~f~~l~~~-----~-~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~-i~~~ef~~~l 81 (229)
..+.++++++..+++.|..++.+ + +..|.+...++.. ....+.++. ...++..++....+. |+..+|..++
T Consensus 10 ~~~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~-~~~l~~~~D~d~~G~~I~~~EF~~~~ 87 (183)
T 1dgu_A 10 DLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPF-KERICRVFSTSPAKDSLSFEDFLDLL 87 (183)
T ss_dssp CCCSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTT-HHHHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcH-HHHHHHHhCCCCCCCEecHHHHHHHH
Confidence 35789999999999999999983 4 4114477777766 555665543 346777788777788 9999999999
Q ss_pred hhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-----CChHHHHHH----HHHHhcCCCCCcccHHHHHH
Q psy8447 82 HNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-----GTNEELIKF----TFLIYDLNNDGFITREEMFQ 152 (229)
Q Consensus 82 ~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-----~~~~~~~~~----~F~~~D~~~~G~I~~~e~~~ 152 (229)
............+..+|+.+|.+++|.|+..||..++..+.. ..+.+.+.. +|..+|.|++|.|+++||..
T Consensus 88 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~ 167 (183)
T 1dgu_A 88 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH 167 (183)
T ss_dssp HHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 887655555556899999999999999999999999988765 345555554 99999999999999999998
Q ss_pred HHH
Q psy8447 153 LLR 155 (229)
Q Consensus 153 ~l~ 155 (229)
++.
T Consensus 168 ~~~ 170 (183)
T 1dgu_A 168 VIS 170 (183)
T ss_dssp HHC
T ss_pred HHH
Confidence 875
No 112
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.61 E-value=2.5e-15 Score=115.53 Aligned_cols=147 Identities=20% Similarity=0.154 Sum_probs=113.7
Q ss_pred hccCcCcHHHHHHHHHHHHHHhh-----cC-CCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCC-CCHHHHHHH
Q psy8447 8 QLLPLSFRQEVETLCKIFKKLLN-----SS-SNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQG-LDRVVFREL 80 (229)
Q Consensus 8 ~~~~~~~~~~i~~l~~~f~~l~~-----~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~-i~~~ef~~~ 80 (229)
...+.||+++|..+++.|..++. ++ ++.|.+...++.. ....+.++. ..+++..|+....+. |+..+|..+
T Consensus 40 ~~~t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~-~~~lf~~~D~d~dG~~I~f~EF~~~ 117 (214)
T 2l4h_A 40 QDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPF-KERICRVFSTSPAKDSLSFEDFLDL 117 (214)
T ss_dssp HSCCSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTT-HHHHHHHHCCSSSCCSEEHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChH-HHHHHHHhCcCCCCCEecHHHHHHH
Confidence 34688999999999999999987 44 4223366666655 444444432 456788888777788 999999999
Q ss_pred HhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-----CChHHH----HHHHHHHhcCCCCCcccHHHHH
Q psy8447 81 LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-----GTNEEL----IKFTFLIYDLNNDGFITREEMF 151 (229)
Q Consensus 81 l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-----~~~~~~----~~~~F~~~D~~~~G~I~~~e~~ 151 (229)
+..........+.+..+|+.+|.|++|.|+.+||..++..+.. ..+.+. +..+|..+|.|++|.|+++||.
T Consensus 118 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~EF~ 197 (214)
T 2l4h_A 118 LSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ 197 (214)
T ss_dssp HHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence 9887655555656899999999999999999999999987754 333333 4469999999999999999999
Q ss_pred HHHHH
Q psy8447 152 QLLRN 156 (229)
Q Consensus 152 ~~l~~ 156 (229)
.++..
T Consensus 198 ~~~~~ 202 (214)
T 2l4h_A 198 HVISR 202 (214)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98863
No 113
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.61 E-value=2.6e-14 Score=110.61 Aligned_cols=144 Identities=17% Similarity=0.075 Sum_probs=114.5
Q ss_pred cCcCcHHHHHHHHHHHHHHhhc--CCCCCCCCCCchhhhHhhcCCCh--hHHHHHHhccCccCCCCCCHHHHHHHHhhhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNS--SSNAGVPISTSTPVVVQVSGLPP--SNVTERYKGFSPFSFQGLDRVVFRELLHNTF 85 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~--~~~~~~~~~~~~~~~~~~~~l~~--~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~ 85 (229)
.+.++++++..++..|..++.+ ++|. +...++...... ..+. ..+..++..++....+.|+..+|..++....
T Consensus 39 ~~~ls~~ei~~l~~~F~~~D~d~~~~G~--I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~ 115 (226)
T 2zfd_A 39 DTVFSVSEIEALYELFKKISSAVIDDGL--INKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFH 115 (226)
T ss_dssp HSSCCHHHHHHHHHHHHHHHTSSSCSSS--BCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTS
T ss_pred hCCCCHHHHHHHHHHHHHhCcccCCCCe--EcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHc
Confidence 4689999999999999999988 5554 777777666554 3332 4466788888877767799999999999876
Q ss_pred CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHh----hccCChHH----HHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 86 DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSC----FLRGTNEE----LIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 86 ~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~----~~~~~~~~----~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
......+.+..+|+.+|.|++|.|+++||..++.. .....+.+ .+..+|+.+|.|++|.|+++||..++..
T Consensus 116 ~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~ 194 (226)
T 2zfd_A 116 PNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 194 (226)
T ss_dssp TTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 55566666899999999999999999999999963 23333333 3567888999999999999999999875
No 114
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.60 E-value=2.3e-14 Score=107.59 Aligned_cols=141 Identities=22% Similarity=0.174 Sum_probs=113.1
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC---CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCC
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG---LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDL 87 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~ 87 (229)
+.++++++..+...|... +++ |.+...++..+....+ .+...+..++..++....+.|+..+|..++...+..
T Consensus 20 ~~~~~~~i~~~~~~fd~~--~~~--G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~ 95 (190)
T 1fpw_A 20 TYFDRREIQQWHKGFLRD--CPS--GQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRG 95 (190)
T ss_dssp CCSTHHHHHHHHHHHHHH--CTT--CCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCC
T ss_pred cCCCHHHHHHHHHHHHHH--CCC--CcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccC
Confidence 578999998887777655 233 4477777777766653 445677888888887666669999999999988765
Q ss_pred CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc------------cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 88 VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL------------RGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 88 ~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~------------~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
.+..+ +..+|+.+|.+++|.|+++||..++..+. .....+.+..+|+.+|.|++|.|+++||..++.
T Consensus 96 ~~~~~-~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 174 (190)
T 1fpw_A 96 TLEEK-LSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174 (190)
T ss_dssp CSTHH-HHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHH
T ss_pred CcHHH-HHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 55555 78999999999999999999999998742 125678899999999999999999999999986
Q ss_pred H
Q psy8447 156 N 156 (229)
Q Consensus 156 ~ 156 (229)
.
T Consensus 175 ~ 175 (190)
T 1fpw_A 175 V 175 (190)
T ss_dssp S
T ss_pred h
Confidence 4
No 115
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.60 E-value=1.4e-14 Score=103.76 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=111.5
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC--CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhc-CCCc
Q psy8447 13 SFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG--LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTF-DLVT 89 (229)
Q Consensus 13 ~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~-~~~~ 89 (229)
+|+++ ++..|..++.+++|. +...++....+..+ ++..++..++.. ...+.|+..+|..++.... ....
T Consensus 2 ls~~e---l~~~F~~~D~d~~G~--i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~ 73 (145)
T 2bl0_B 2 ASADQ---IQECFQIFDKDNDGK--VSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTE 73 (145)
T ss_dssp CCHHH---HHHHHHHHCTTCSSC--EEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGG
T ss_pred CCHHH---HHHHHHHhCCCCcCc--cCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcc
Confidence 46666 888999999877765 77888887777665 456778777776 2233399999999998754 3344
Q ss_pred HHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 90 EEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 90 ~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
....+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+|.+++|.|+++||..++..
T Consensus 74 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 74 QSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp GHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 4555899999999999999999999999998877788899999999999999999999999999864
No 116
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.60 E-value=2.7e-14 Score=104.92 Aligned_cols=151 Identities=11% Similarity=0.074 Sum_probs=126.7
Q ss_pred HHHHHHhhcCCCCCCCCCCchhhhHhhcC-------CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHH
Q psy8447 23 KIFKKLLNSSSNAGVPISTSTPVVVQVSG-------LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILME 95 (229)
Q Consensus 23 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~ 95 (229)
..|..++.+++|. ++..++..+.+..+ ++..++..++..++....+.|+..+|..++... ..+.
T Consensus 3 ~~F~~~D~d~~G~--i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~ 73 (165)
T 1k94_A 3 YTYFSAVAGQDGE--VDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL-------NAWK 73 (165)
T ss_dssp HHHHHHHHGGGTS--BCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH-------HHHH
T ss_pred HHHHHHhCCCCCc--CCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-------HHHH
Confidence 4588888877766 77778877777755 467889999999987777779999999988753 3478
Q ss_pred HHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHH
Q psy8447 96 RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLV 175 (229)
Q Consensus 96 ~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~ 175 (229)
.+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+ +++|.|+++||..++... ..+
T Consensus 74 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~---------------~~~ 136 (165)
T 1k94_A 74 ENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL---------------RAL 136 (165)
T ss_dssp HHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH---------------HHH
T ss_pred HHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH---------------HHH
Confidence 899999999999999999999999887778888999999999 899999999999999754 237
Q ss_pred HHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 176 ELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 176 ~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..+|+.+|.+++|.|+.+ |.+++.
T Consensus 137 ~~~F~~~D~d~~G~i~~~-~~~~l~ 160 (165)
T 1k94_A 137 TDFFRKRDHLQQGSANFI-YDDFLQ 160 (165)
T ss_dssp HHHHHTTCTTCCSEEEEE-HHHHHH
T ss_pred HHHHHHhCCCCCCeEeee-HHHHHH
Confidence 789999999999999777 666654
No 117
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.60 E-value=6.3e-15 Score=109.90 Aligned_cols=128 Identities=15% Similarity=0.182 Sum_probs=95.7
Q ss_pred HHHHHHHHH-ccCCCCceeHHHHHHHHHhhc----cCChHHHHH-----------HHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 93 LMERIFCAF-DRLCDGVIHLDEWVLGLSCFL----RGTNEELIK-----------FTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 93 ~~~~lf~~~-d~~~~g~I~~~ef~~~~~~~~----~~~~~~~~~-----------~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
.+..+|..+ |.|++|.|+++||..++..+. ...+...+. .+|..+|.+++|.|+.+||..++..
T Consensus 9 ~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 88 (185)
T 2sas_A 9 KIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEK 88 (185)
T ss_dssp HHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred HHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence 368899999 999999999999999988876 445555444 3499999999999999999999987
Q ss_pred HhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHHH
Q psy8447 157 SLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~~ 220 (229)
...........+......+..+|+.+|.+++|.|+++||..++... ..+..+|........|..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i 156 (185)
T 2sas_A 89 TIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTF 156 (185)
T ss_dssp HHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCC
T ss_pred HhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcC
Confidence 6543111111122344568899999999999999999999999653 345556655555444443
No 118
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.60 E-value=2.7e-14 Score=105.19 Aligned_cols=150 Identities=15% Similarity=0.106 Sum_probs=124.9
Q ss_pred HHHHHHhhcCCCCCCCCCCchhhhHhhcC-------CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHH
Q psy8447 23 KIFKKLLNSSSNAGVPISTSTPVVVQVSG-------LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILME 95 (229)
Q Consensus 23 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~ 95 (229)
+.|..++.+++|. ++..++....+..+ ++..++..++..++....+.|+..+|..++... ..+.
T Consensus 5 ~~F~~~D~d~~G~--i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~-------~~~~ 75 (167)
T 1gjy_A 5 YGYFASVAGQDGQ--IDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL-------NGWR 75 (167)
T ss_dssp HHHHHHHCCTTSC--BCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH-------HHHH
T ss_pred HHHHHHHcCCCCc--CCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-------HHHH
Confidence 4588888776665 77788887777755 467889999999987776779999999988753 3478
Q ss_pred HHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHH
Q psy8447 96 RIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLV 175 (229)
Q Consensus 96 ~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~ 175 (229)
.+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+ +++|.|+++||..++... ..+
T Consensus 76 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~---------------~~~ 138 (167)
T 1gjy_A 76 QHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL---------------RAL 138 (167)
T ss_dssp HHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH---------------HHH
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH---------------HHH
Confidence 899999999999999999999999887778888999999999 899999999999998754 137
Q ss_pred HHHHHHcCCCCCCcccHH--HHHHH
Q psy8447 176 ELALRKMDYDKDGKISFQ--DFQQS 198 (229)
Q Consensus 176 ~~~~~~~d~~~dg~Is~~--ef~~~ 198 (229)
..+|+.+|.+++|.|+.+ +|+.+
T Consensus 139 ~~~F~~~D~d~~G~i~~~~~~~l~~ 163 (167)
T 1gjy_A 139 TDSFRRRDSAQQGMVNFSYDDFIQC 163 (167)
T ss_dssp HHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred HHHHHHhCCCCCeeEEeeHHHHHHH
Confidence 789999999999999865 55543
No 119
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.59 E-value=1.8e-14 Score=108.16 Aligned_cols=142 Identities=20% Similarity=0.130 Sum_probs=112.5
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhc---CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVS---GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD 86 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~ 86 (229)
.+.++++++..+...|... +++ |.+...++..+.... +.+...+..++..++....+.|+..+|..++...+.
T Consensus 19 ~~~~~~~~i~~~f~~fd~~--~~~--G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~ 94 (190)
T 1g8i_A 19 KTYFTEKEVQQWYKGFIKD--CPS--GQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSR 94 (190)
T ss_dssp TSSSCHHHHHHHHHHHHHH--CTT--SEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHh--CCC--CcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcC
Confidence 4578888888876666544 133 347777777777665 566677888888888766666999999999988765
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh------------ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF------------LRGTNEELIKFTFLIYDLNNDGFITREEMFQLL 154 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~------------~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l 154 (229)
..+ .+.+..+|+.+|.+++|.|+++||..++..+ ....+.+.+..+|+.+|.|++|.|+++||..++
T Consensus 95 ~~~-~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~ 173 (190)
T 1g8i_A 95 GTL-DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGS 173 (190)
T ss_dssp CCH-HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHH
T ss_pred CCH-HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence 444 4447899999999999999999999999874 224667889999999999999999999999998
Q ss_pred HH
Q psy8447 155 RN 156 (229)
Q Consensus 155 ~~ 156 (229)
..
T Consensus 174 ~~ 175 (190)
T 1g8i_A 174 KA 175 (190)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 120
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.59 E-value=3.6e-14 Score=107.90 Aligned_cols=141 Identities=19% Similarity=0.229 Sum_probs=111.3
Q ss_pred cCcHHHHHHHHHHHHHHhhc-CCCCCCCCCCchhhhHhhcC--CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCC
Q psy8447 12 LSFRQEVETLCKIFKKLLNS-SSNAGVPISTSTPVVVQVSG--LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLV 88 (229)
Q Consensus 12 ~~~~~~i~~l~~~f~~l~~~-~~~~~~~~~~~~~~~~~~~~--l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~ 88 (229)
..|.-....++..|..++.+ ++|. ++..++..+....+ .+...+..++..++....+.|+..+|..++.......
T Consensus 15 ~~t~~~~~el~~~f~~~D~~~~~G~--i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~ 92 (204)
T 1jba_A 15 AVGAADAAQLQEWYKKFLEECPSGT--LFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGT 92 (204)
T ss_dssp SCCHHHHHHHHHHHHHHHSSSTTCC--EEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCC
T ss_pred HhcCCCHHHHHHHHHHHHhhCCCCC--cCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCC
Confidence 33444555566678877765 4544 77778877777766 4556788888888876666699999999999876655
Q ss_pred cHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-----------------CChHHHHHHHHHHhcCCCCCcccHHHHH
Q psy8447 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-----------------GTNEELIKFTFLIYDLNNDGFITREEMF 151 (229)
Q Consensus 89 ~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-----------------~~~~~~~~~~F~~~D~~~~G~I~~~e~~ 151 (229)
+... +..+|+.+|.+++|.|+++||..++..+.. ....+.+..+|+.+|.|++|.|+++||.
T Consensus 93 ~~~~-~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~ 171 (204)
T 1jba_A 93 LEHK-LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV 171 (204)
T ss_dssp CTHH-HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHH
T ss_pred HHHH-HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence 5544 789999999999999999999999987621 1566789999999999999999999999
Q ss_pred HHHH
Q psy8447 152 QLLR 155 (229)
Q Consensus 152 ~~l~ 155 (229)
.++.
T Consensus 172 ~~~~ 175 (204)
T 1jba_A 172 EGAR 175 (204)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9885
No 121
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.59 E-value=4.7e-14 Score=109.15 Aligned_cols=142 Identities=16% Similarity=0.133 Sum_probs=114.8
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC---CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG---LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD 86 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~ 86 (229)
.+.++++++..+++.|...+ + .|.+...++..+....+ .+...+..++..++....+.|+..+|..++.....
T Consensus 45 ~~~~s~~ei~~l~~~Fd~~d--~--~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~ 120 (224)
T 1s1e_A 45 QTNFTKRELQVLYRGFKNEC--P--SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR 120 (224)
T ss_dssp HSSCCHHHHHHHHHHHHHHC--T--TSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHhhC--C--CCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHcc
Confidence 36799999999988888752 3 34477777777776654 46678888999888777777999999999988765
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh----c--------cCChHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF----L--------RGTNEELIKFTFLIYDLNNDGFITREEMFQLL 154 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~----~--------~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l 154 (229)
... .+.+..+|+.+|.|++|.|+++||..++..+ . .....+.+..+|+.+|.|++|.|+++||..++
T Consensus 121 ~~~-~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 199 (224)
T 1s1e_A 121 GTV-HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 199 (224)
T ss_dssp CCH-HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 444 4447899999999999999999999999775 1 12345789999999999999999999999998
Q ss_pred HH
Q psy8447 155 RN 156 (229)
Q Consensus 155 ~~ 156 (229)
..
T Consensus 200 ~~ 201 (224)
T 1s1e_A 200 QE 201 (224)
T ss_dssp HT
T ss_pred Hh
Confidence 64
No 122
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.58 E-value=3.9e-14 Score=107.91 Aligned_cols=144 Identities=17% Similarity=0.096 Sum_probs=113.9
Q ss_pred cCcCcHHHHHHHHHHHHHHhhc--CCCCCCCCCCchhhhHhhcCCC--hhHHHHHHhccCccCCCCCCHHHHHHHHhhhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNS--SSNAGVPISTSTPVVVQVSGLP--PSNVTERYKGFSPFSFQGLDRVVFRELLHNTF 85 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~--~~~~~~~~~~~~~~~~~~~~l~--~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~ 85 (229)
.+.++++++..++..|..++.+ ++|. +...++...... ..+ ...+..++..++....+.|+..+|..++....
T Consensus 28 ~~~~s~~~~~~l~~~F~~~D~d~~~~G~--i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~ 104 (207)
T 2ehb_A 28 VTPFTVEEVEALYELFKKLSSSIIDDGL--IHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFH 104 (207)
T ss_dssp HSSCCHHHHHHHHHHHHHHTTSSSCSSC--EEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGS
T ss_pred hCCCCHHHHHHHHHHHHHhccccCCCCc--cCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHc
Confidence 4689999999999999999988 5554 666676665544 222 24566788888876666699999999999876
Q ss_pred CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh----ccCChHH----HHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 86 DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF----LRGTNEE----LIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 86 ~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~----~~~~~~~----~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
......+.+..+|+.+|.+++|.|+++||..++..+ ....+.+ .+..+|..+|.|++|.|+++||..++..
T Consensus 105 ~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~ 183 (207)
T 2ehb_A 105 PSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSL 183 (207)
T ss_dssp TTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 555566668999999999999999999999998633 3333333 3577889999999999999999999875
No 123
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.58 E-value=3e-16 Score=107.50 Aligned_cols=100 Identities=20% Similarity=0.248 Sum_probs=81.3
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh---hcCCC
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL---ISHPQ 163 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~---~~~~~ 163 (229)
.++..+ ++.+++.+| ++|.|+|+||+.++.. .....+.++.+|+.||.+++|+|+.+|+..++..++ .....
T Consensus 5 ~~~~~e-~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 79 (108)
T 2kyc_A 5 ILSPSD-IAAALRDCQ--APDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTA 79 (108)
T ss_dssp SSCHHH-HHHHHTTSC--STTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCT
T ss_pred cCCHHH-HHHHHHHcC--CCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCH
Confidence 355555 688888888 8899999999998853 234456789999999999999999999999999873 22222
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 164 DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
.. ++.+++.+|.+++|.|+|+||+.++.
T Consensus 80 ~~---------~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 80 SE---------TKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp TT---------THHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HH---------HHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 22 67799999999999999999999875
No 124
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.58 E-value=2.6e-14 Score=108.20 Aligned_cols=140 Identities=19% Similarity=0.186 Sum_probs=108.2
Q ss_pred cCcCcHHHHHHHHHHHHHHhhc-CCCCCCCCCCchhhhHhhcCCChh---HHHHHHhccCccCCCCCCHHHHHHHHhhhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNS-SSNAGVPISTSTPVVVQVSGLPPS---NVTERYKGFSPFSFQGLDRVVFRELLHNTF 85 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~---~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~ 85 (229)
.|.++.+++.. .|..++.+ ++| .+...++..+.+..++++. .+..++..++....+.|+..+|..++..+.
T Consensus 8 ~t~~~~~el~~---~f~~fd~~~~~G--~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~ 82 (198)
T 2r2i_A 8 VEELSATECHQ---WYKKFMTECPSG--QLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVL 82 (198)
T ss_dssp HHHHHTSCHHH---HHHHHHHHCTTS--EECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHS
T ss_pred CCCCCHHHHHH---HHHHHHHhCCCC--cCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHc
Confidence 35566666554 56666654 444 3777788888888887753 466777777766566699999999999877
Q ss_pred CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc------c-CChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 86 DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL------R-GTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 86 ~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~------~-~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
...+. ..+..+|+.+|.+++|.|+++||..++..+. . ....+.+..+|+.+|.|++|.|+++||..++.
T Consensus 83 ~~~~~-~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 158 (198)
T 2r2i_A 83 KGKVD-QKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158 (198)
T ss_dssp SCCHH-HHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred cCchH-HHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 64444 4478999999999999999999999998774 2 23456699999999999999999999999885
No 125
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.58 E-value=2.7e-14 Score=109.03 Aligned_cols=143 Identities=14% Similarity=0.057 Sum_probs=113.2
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCC-
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLV- 88 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~- 88 (229)
.+.++++++..++..|..++.+++|. +...++..+. ..+..+. ...++..++....+.|+..+|..++.......
T Consensus 20 ~~~ls~~~~~~l~~~F~~~D~d~dG~--Is~~El~~~~-~lg~~~~-~~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~ 95 (208)
T 2ct9_A 20 ETGFSHSQITRLYSRFTSLDKGENGT--LSREDFQRIP-ELAINPL-GDRIINAFFSEGEDQVNFRGFMRTLAHFRPIED 95 (208)
T ss_dssp HHCCCHHHHHHHHHHHHHHCTTCSSE--ECTGGGGGCH-HHHTSTT-HHHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-
T ss_pred cCCCCHHHHHHHHHHHHHHCCCCCCc--CcHHHHHHHH-HcCCCCc-HHHHHHHHcCCCCCcCcHHHHHHHHHhhccccc
Confidence 46789999999999999999887776 7777776653 4444432 35567777765555699999999998764311
Q ss_pred --------------cHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh-ccCChHHHHHHH----HHHhcCCCCCcccHHH
Q psy8447 89 --------------TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF-LRGTNEELIKFT----FLIYDLNNDGFITREE 149 (229)
Q Consensus 89 --------------~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~-~~~~~~~~~~~~----F~~~D~~~~G~I~~~e 149 (229)
...+.+..+|+.+|.|++|.|+.+||..++..+ ....+.+.+..+ |..+|.|++|.|+++|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~E 175 (208)
T 2ct9_A 96 NEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTE 175 (208)
T ss_dssp ----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHH
T ss_pred hhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence 145568899999999999999999999999986 556667777666 9999999999999999
Q ss_pred HHHHHHH
Q psy8447 150 MFQLLRN 156 (229)
Q Consensus 150 ~~~~l~~ 156 (229)
|..++..
T Consensus 176 F~~~~~~ 182 (208)
T 2ct9_A 176 FVKVLEK 182 (208)
T ss_dssp HHHTTTT
T ss_pred HHHHHhc
Confidence 9998764
No 126
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.57 E-value=8.5e-16 Score=140.89 Aligned_cols=146 Identities=17% Similarity=0.214 Sum_probs=106.7
Q ss_pred HHHHHhccCccCC-CC-CCHHHHHHHHhhhcC--------CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCCh
Q psy8447 57 VTERYKGFSPFSF-QG-LDRVVFRELLHNTFD--------LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 126 (229)
Q Consensus 57 ~~~l~~~f~~~d~-~~-i~~~ef~~~l~~~~~--------~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 126 (229)
+.++.+.|..+|. ++ |+..+|..++..++. ..+..+ ++.+|+.+|.|++|.|+|+||+.++...
T Consensus 533 ~~~l~~~F~~~D~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~-~~~l~~~~D~d~~G~I~~~EF~~~~~~~----- 606 (900)
T 1qxp_A 533 DDNFKTLFSKLAGDDMEISVKELQTILNRIISKHKDLRTNGFSLES-CRSMVNLMDRDGNGKLGLVEFNILWNRI----- 606 (900)
T ss_dssp --------CCCCCSSSSCCCSCTTTTTCC---------CCCCCHHH-HHHHHHHHCC--CCCCCSSSHHHHHHHH-----
T ss_pred HHHHHHHHHHHcCCCCcCCHHHHHHHHHHhhcccccccCCCCCHHH-HHHHHHHhCCCCCCcCCHHHHHHHHHHH-----
Confidence 5566666666652 22 999999888888654 344444 7889999999999999999999988765
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHH
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLL 206 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~ 206 (229)
+.++.+|+.||.|++|+|+.+||..++..++... +++ .++.++..+| +++|.|+|+||+.++...+.+.
T Consensus 607 -~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l-----~~~----~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~ 675 (900)
T 1qxp_A 607 -RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKL-----PCQ----LHQVIVARFA-DDELIIDFDNFVRCLVRLEILF 675 (900)
T ss_dssp -HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEEC-----CHH----HHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999998875433 222 3677888898 9999999999999998888888
Q ss_pred HHhcccCCChHHH
Q psy8447 207 EAFGQCLPSDAAR 219 (229)
Q Consensus 207 ~~~~~~~~~~~~~ 219 (229)
+.|....+...|.
T Consensus 676 ~~F~~~D~d~~G~ 688 (900)
T 1qxp_A 676 KIFKQLDPENTGT 688 (900)
T ss_dssp HHHHHSCSSCCSC
T ss_pred HHHHhhCCCCCce
Confidence 8888877666553
No 127
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.57 E-value=6e-15 Score=104.08 Aligned_cols=122 Identities=19% Similarity=0.203 Sum_probs=96.7
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
++.+|..+|.+++|.|+++||..++..+....+.+.+..+|+.+|.+++|.|+.+||..++..+... ... ....
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~-----~~~-~~~~ 75 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQ-----DLS-DDKI 75 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCC-----SSH-HHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhccc-----ccC-CCHH
Confidence 4679999999999999999999999988877888899999999999999999999999987422100 011 1222
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcChH--HHHHhcccCCChHHHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDEPL--LLEAFGQCLPSDAARQS 221 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~--~~~~~~~~~~~~~~~~~ 221 (229)
.+..+|+.+|.+++|.|+++||..++..... +..+|....+...|..+
T Consensus 76 ~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~D~~~dg~i~ 125 (134)
T 1jfj_A 76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYIT 125 (134)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEE
T ss_pred HHHHHHHHHCCCCCCccCHHHHHHHHHHhCHHHHHHHHHHhCCCCCCcEe
Confidence 3888999999999999999999999986543 55666666555555443
No 128
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.56 E-value=2.6e-15 Score=137.29 Aligned_cols=137 Identities=20% Similarity=0.251 Sum_probs=115.1
Q ss_pred cCCChhHHHHHHhccCccCCCC---CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-CC
Q psy8447 50 SGLPPSNVTERYKGFSPFSFQG---LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-GT 125 (229)
Q Consensus 50 ~~l~~~~~~~l~~~f~~~d~~~---i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~~ 125 (229)
.++++..+..+...|..+|.++ |+..+|..++..++..++..+ +..+|..+|.|++|.|+|+||+.++..... ..
T Consensus 717 ~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~-~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~ 795 (863)
T 1sjj_A 717 KGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAE-FARIMSIVDPNRMGVVTFQAFIDFMSRETADTD 795 (863)
T ss_dssp CCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHH-HHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCS
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHH-HHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence 4567777888888888777653 999999999999887666655 789999999999999999999999887653 34
Q ss_pred hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCC-----CCCcccHHHHHHHHh
Q psy8447 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD-----KDGKISFQDFQQSVT 200 (229)
Q Consensus 126 ~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-----~dg~Is~~ef~~~~~ 200 (229)
..+.+..+|+.| .+++|+|+.+||..++. ++.+..++..+|.+ +||.|+|+||..++.
T Consensus 796 ~~~~l~~aF~~~-~d~~G~Is~~El~~~l~----------------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~ 858 (863)
T 1sjj_A 796 TADQVMASFKIL-AGDKNYITVDELRRELP----------------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALY 858 (863)
T ss_dssp SSHHHHHHHHGG-GTSSSEEEHHHHHHHSC----------------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHS
T ss_pred CHHHHHHHHHHH-hCCCCcCcHHHHHHHCC----------------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHh
Confidence 557899999999 89999999999999873 12377899999976 699999999999998
Q ss_pred cChH
Q psy8447 201 DEPL 204 (229)
Q Consensus 201 ~~~~ 204 (229)
..|.
T Consensus 859 ~~~~ 862 (863)
T 1sjj_A 859 GESD 862 (863)
T ss_dssp CCSC
T ss_pred cCCC
Confidence 8764
No 129
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.56 E-value=7.3e-14 Score=105.82 Aligned_cols=160 Identities=16% Similarity=0.118 Sum_probs=134.7
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC-------CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhc
Q psy8447 13 SFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG-------LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTF 85 (229)
Q Consensus 13 ~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-------l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~ 85 (229)
++++++..++. |..++.+++|. +...++..+.+..+ ++..++..++..++....+.|+..+|..++...
T Consensus 27 ~~~~~~~~l~~-F~~~D~d~~G~--i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~- 102 (198)
T 1juo_A 27 FPGQTQDPLYG-YFAAVAGQDGQ--IDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL- 102 (198)
T ss_dssp CTTCCCCTTHH-HHHHHHTTTTE--ECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH-
T ss_pred CCccccHHHHH-HHHHhCCCCCc--CCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH-
Confidence 56667888888 99998877765 77788888777765 477889999999987776779999999988753
Q ss_pred CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCC
Q psy8447 86 DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDE 165 (229)
Q Consensus 86 ~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~ 165 (229)
..+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+ +++|.|+++||..++...
T Consensus 103 ------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~-------- 166 (198)
T 1juo_A 103 ------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL-------- 166 (198)
T ss_dssp ------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH--------
T ss_pred ------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH--------
Confidence 3478899999999999999999999999887778888999999999 899999999999999754
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCcccH--HHHHHHH
Q psy8447 166 DPDEGVRDLVELALRKMDYDKDGKISF--QDFQQSV 199 (229)
Q Consensus 166 ~~~~~~~~~~~~~~~~~d~~~dg~Is~--~ef~~~~ 199 (229)
..+..+|+.+|.+++|.|+. .+|+.++
T Consensus 167 -------~~~~~~F~~~D~d~~G~is~~~~~~l~~~ 195 (198)
T 1juo_A 167 -------RALTDSFRRRDTAQQGVVNFPYDDFIQCV 195 (198)
T ss_dssp -------HHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred -------HHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence 13678999999999999987 6666554
No 130
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.56 E-value=5.2e-14 Score=103.57 Aligned_cols=120 Identities=21% Similarity=0.268 Sum_probs=99.0
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++...... ....+
T Consensus 30 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~--------~~~~~ 101 (169)
T 3qrx_A 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGE--------RDSRE 101 (169)
T ss_dssp HHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHH--------HHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcc--------cCcHH
Confidence 6788999999999999999999999998888888999999999999999999999999998765321 12234
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQS 221 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~ 221 (229)
.+..+|+.+|.+++|.|+.+||..++... ..+..+|........|..+
T Consensus 102 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~ 155 (169)
T 3qrx_A 102 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 155 (169)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBC
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEe
Confidence 57889999999999999999999998744 2355566666665555443
No 131
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.55 E-value=3.9e-14 Score=106.45 Aligned_cols=129 Identities=19% Similarity=0.190 Sum_probs=97.7
Q ss_pred HHHHHHHH-ccCCCCceeHHHHHHHHHhh----ccCChHHHHHHHH-----------HHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAF-DRLCDGVIHLDEWVLGLSCF----LRGTNEELIKFTF-----------LIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~-d~~~~g~I~~~ef~~~~~~~----~~~~~~~~~~~~F-----------~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|..+ |.|++|.|+++||..++..+ ........+..+| ..+|.|++|.|+.+||..++...
T Consensus 14 l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 93 (191)
T 2ccm_A 14 ILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAEC 93 (191)
T ss_dssp HHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred HHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHHHH
Confidence 67899999 99999999999999999887 4445556666666 99999999999999999998875
Q ss_pred hhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHHHHH
Q psy8447 158 LISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 222 (229)
.................+..+|+.+|.+++|.|+++||..++... ..+..+|........|..++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~ 162 (191)
T 2ccm_A 94 VKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTR 162 (191)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCBH
T ss_pred hccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcCH
Confidence 421000111123445568999999999999999999999998643 24556677666665554433
No 132
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.55 E-value=2.9e-14 Score=102.43 Aligned_cols=121 Identities=18% Similarity=0.250 Sum_probs=98.0
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.|++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++...... ....+
T Consensus 8 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~--------~~~~~ 79 (143)
T 2obh_A 8 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE--------KDTKE 79 (143)
T ss_dssp HHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH--------HHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhcc--------ccHHH
Confidence 6789999999999999999999999998877888899999999999999999999999988654221 11233
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 222 (229)
.+..+|+.+|.+++|.|+.+||..++... ..+-+++........|..++
T Consensus 80 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~ 134 (143)
T 2obh_A 80 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSE 134 (143)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeH
Confidence 57889999999999999999999998642 23555666666555555443
No 133
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.54 E-value=3.6e-14 Score=130.13 Aligned_cols=190 Identities=15% Similarity=0.146 Sum_probs=125.3
Q ss_pred cCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHH
Q psy8447 12 LSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEE 91 (229)
Q Consensus 12 ~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~ 91 (229)
.++.+++.. .+..++.+++|. +...++..+.... .++..+++.|+....+.|+..+|..++..++...+..
T Consensus 573 ~~s~~~~~~---l~~~~D~d~~G~--I~~~EF~~~~~~~----~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~ 643 (900)
T 1qxp_A 573 GFSLESCRS---MVNLMDRDGNGK--LGLVEFNILWNRI----RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQ 643 (900)
T ss_dssp CCCHHHHHH---HHHHHCC--CCC--CCSSSHHHHHHHH----HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHH
T ss_pred CCCHHHHHH---HHHHhCCCCCCc--CCHHHHHHHHHHH----HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHH
Confidence 566766655 466667666554 7777776665432 4455555555554445599999999999987666666
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcc--------------------------
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFI-------------------------- 145 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I-------------------------- 145 (229)
+ +..++..+| +++|.|+|+||+.++... +.+..+|+.+|.+++|.|
T Consensus 644 ~-~~~l~~~~d-d~dg~I~~~eF~~~~~~~------~~l~~~F~~~D~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~ 715 (900)
T 1qxp_A 644 L-HQVIVARFA-DDELIIDFDNFVRCLVRL------EILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHH 715 (900)
T ss_dssp H-HHHHHHHTS-CSSSBCCHHHHHHHHHHH------HHHHHHHHHSCSSCCSCEEEEHHHHHHHTCC-------------
T ss_pred H-HHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHHHHHhhCCCCCceEEecHHHHHHHhhhccccccccccccc
Confidence 5 789999999 999999999999988754 455666666776666655
Q ss_pred --------------------------------cHHHHHHHHHHHhhcCCC---CCCChHHHHHHHHHHHHHcCCCCCCcc
Q psy8447 146 --------------------------------TREEMFQLLRNSLISHPQ---DEDPDEGVRDLVELALRKMDYDKDGKI 190 (229)
Q Consensus 146 --------------------------------~~~e~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~dg~I 190 (229)
+.+||..++..++...+. ...+ .+.++.+++.+|.|+||.|
T Consensus 716 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~G~Is~~El~~~L~~~~~~~~~~~~~~~s----~~~~~~l~~~~D~d~dG~I 791 (900)
T 1qxp_A 716 HMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFG----IDTCRSMVAVMDSDTTGKL 791 (900)
T ss_dssp -CCCCCC--------------CCCCTTCSSCBCHHHHTTTSCC----CCSCC--CCC----HHHHHHHHHHHCCSSSSSB
T ss_pred cccccCCCCCChHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcccccccccCCCC----HHHHHHHHHHHCCCCCCeE
Confidence 555555554433221111 1112 2347889999999999999
Q ss_pred cHHHHHHHHhcChHHHHHhcccCCChHHHHHH
Q psy8447 191 SFQDFQQSVTDEPLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 191 s~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (229)
+|+||..++.....+..+|..+.....|..+.
T Consensus 792 s~~EF~~l~~~~~~l~~~F~~~D~d~dG~Is~ 823 (900)
T 1qxp_A 792 GFEEFKYLWNNIKKWQGIYKRFETDRSGTIGS 823 (900)
T ss_dssp CSHHHHHHHHHHHHHSSCC----CCSCC----
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCCCccCH
Confidence 99999999987777777777777666665543
No 134
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.54 E-value=7.1e-14 Score=101.86 Aligned_cols=119 Identities=15% Similarity=0.216 Sum_probs=98.2
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|++.||..++..+....+...+..+|..+|.+++|.|+++||..++....... ...+
T Consensus 25 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~--------~~~~ 96 (161)
T 3fwb_A 25 IYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR--------DPLD 96 (161)
T ss_dssp HHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC--------CHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC--------CcHH
Confidence 67899999999999999999999999988788889999999999999999999999999997654321 1233
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~ 220 (229)
.+..+|+.+|.+++|.|+.+||..++... ..+..+|........|..
T Consensus 97 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i 149 (161)
T 3fwb_A 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEI 149 (161)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSE
T ss_pred HHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcC
Confidence 47889999999999999999999999733 245556666665555544
No 135
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.54 E-value=6.5e-14 Score=101.04 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=96.2
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|++.||..++..+....+...+..+|..+|.+++|.|+++||..++...... ....+
T Consensus 12 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~--------~~~~~ 83 (148)
T 1exr_A 12 FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKE--------QDSEE 83 (148)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHH--------HHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccC--------CCcHH
Confidence 5788999999999999999999999998877888899999999999999999999999988654321 12233
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQS 221 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~ 221 (229)
.+..+|+.+|.+++|.|+.+||..++... ..+..++........|..+
T Consensus 84 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~ 137 (148)
T 1exr_A 84 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 137 (148)
T ss_dssp HHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBC
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEe
Confidence 57789999999999999999999988643 2345556555555444443
No 136
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.53 E-value=9.1e-14 Score=99.30 Aligned_cols=101 Identities=19% Similarity=0.227 Sum_probs=87.9
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|++.||..++..+....+...+..+|..+|.+++|.|+++||..++........ ..+
T Consensus 8 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~--------~~~ 79 (142)
T 2bl0_C 8 FKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTT--------SED 79 (142)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCC--------CHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCC--------hHH
Confidence 688999999999999999999999999887888889999999999999999999999999986432111 123
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
.+..+|+.+|.+++|.|+.+||..++...
T Consensus 80 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~ 108 (142)
T 2bl0_C 80 ILRQAFRTFDPEGTGYIPKAALQDALLNL 108 (142)
T ss_dssp HHHHHHHHTCCSSCSCEEHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHc
Confidence 47889999999999999999999998643
No 137
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.53 E-value=8.8e-14 Score=99.75 Aligned_cols=101 Identities=19% Similarity=0.228 Sum_probs=88.3
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++...... ....+
T Consensus 13 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~--------~~~~~ 84 (147)
T 4ds7_A 13 FKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKC--------NDSEQ 84 (147)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHT--------HHHHH
T ss_pred HHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccC--------CCcHH
Confidence 6788999999999999999999999998888888999999999999999999999999999765321 12334
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
.+..+|+.+|.+++|.|+.+||..++...
T Consensus 85 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~ 113 (147)
T 4ds7_A 85 ELLEAFKVFDKNGDGLISAAELKHVLTSI 113 (147)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHc
Confidence 57889999999999999999999998743
No 138
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.53 E-value=1.6e-14 Score=108.41 Aligned_cols=120 Identities=17% Similarity=0.269 Sum_probs=94.8
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhh-----------ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhc
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCF-----------LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLIS 160 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~-----------~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~ 160 (229)
..+..+|..+|.+++|.|+++||..++..+ ....+...+..+|..+|.+++|.|+++||..++......
T Consensus 40 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~ 119 (191)
T 3khe_A 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLL 119 (191)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhccc
Confidence 347899999999999999999999999877 334556789999999999999999999999987543221
Q ss_pred CCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc----ChHHHHHhcccCCChHHHH
Q psy8447 161 HPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD----EPLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~----~~~~~~~~~~~~~~~~~~~ 220 (229)
. ..+.+..+|+.+|.+++|.|+.+||..++.. ...+..+|........|..
T Consensus 120 ~---------~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~D~~~dg~i 174 (191)
T 3khe_A 120 L---------SRERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEV 174 (191)
T ss_dssp C---------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHHHHHHHHHHCTTCSSSE
T ss_pred c---------hHHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHHHHHHHHHhCCCCCCCC
Confidence 1 1234788999999999999999999999882 2235556666665555544
No 139
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.52 E-value=1.2e-13 Score=102.71 Aligned_cols=120 Identities=18% Similarity=0.214 Sum_probs=97.3
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHH
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVR 172 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~ 172 (229)
.+..+|..+|.+++|.|++.||..++..+....+...+..+|..+|.+++|.|+++||..++...... ....
T Consensus 12 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~--------~~~~ 83 (179)
T 2f2o_A 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD--------TDSE 83 (179)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHH--------HHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccC--------cccH
Confidence 36889999999999999999999999998877888899999999999999999999999998765321 1233
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHH
Q psy8447 173 DLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 173 ~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~ 220 (229)
+.+..+|+.+|.+++|.|+.+||..++... ..+..+|........|..
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i 137 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 137 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSE
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcC
Confidence 458889999999999999999999998643 234455555555444443
No 140
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.52 E-value=1.7e-13 Score=108.02 Aligned_cols=142 Identities=15% Similarity=0.125 Sum_probs=113.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC---CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG---LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD 86 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~ 86 (229)
.+.++++++..+...|...+ + .|.+...++..+....+ .+...+..++..++....+.|+..+|..++..+..
T Consensus 85 ~~~~s~~ei~~l~~~fd~~~--~--~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~ 160 (256)
T 2jul_A 85 QTKFTKKELQSLYRGFKNEC--P--TGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLR 160 (256)
T ss_dssp HTTSCHHHHHHHHHHHHHHC--T--TSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHS
T ss_pred HhCCCHHHHHHHHHHHHhhC--C--CCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhc
Confidence 46799999999988887532 2 33466677776666543 45577888888888766666999999999998765
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc------------cCChHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL------------RGTNEELIKFTFLIYDLNNDGFITREEMFQLL 154 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~------------~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l 154 (229)
..+ .+.+..+|+.+|.+++|.|+++||..++..+. .....+.+..+|+.+|.|++|.|+++||..++
T Consensus 161 ~~~-~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~ 239 (256)
T 2jul_A 161 GTV-HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETC 239 (256)
T ss_dssp CCH-HHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHH
T ss_pred cCh-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHH
Confidence 444 44478999999999999999999999998762 23467889999999999999999999999998
Q ss_pred HH
Q psy8447 155 RN 156 (229)
Q Consensus 155 ~~ 156 (229)
..
T Consensus 240 ~~ 241 (256)
T 2jul_A 240 QK 241 (256)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 141
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.51 E-value=8.6e-14 Score=101.24 Aligned_cols=122 Identities=16% Similarity=0.112 Sum_probs=95.0
Q ss_pred HHHHHHHHc-cCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHH
Q psy8447 94 MERIFCAFD-RLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVR 172 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~ 172 (229)
+..+|..+| .+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++............. .
T Consensus 15 l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~----~ 90 (158)
T 2jnf_A 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQM----Q 90 (158)
T ss_dssp HHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTT----S
T ss_pred HHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhH----H
Confidence 578899999 99999999999999999987778888999999999999999999999999998764321000011 1
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHH
Q psy8447 173 DLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAAR 219 (229)
Q Consensus 173 ~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~ 219 (229)
..+..+|+.+|.+++|.|+.+||..++... ..+..+|....+...|.
T Consensus 91 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~ 143 (158)
T 2jnf_A 91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGT 143 (158)
T ss_dssp STHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSE
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCc
Confidence 137889999999999999999999988632 23444555554444443
No 142
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.50 E-value=6.2e-14 Score=101.15 Aligned_cols=124 Identities=17% Similarity=0.177 Sum_probs=97.9
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|++.||..++..+....+...+..+|..+|.+++|.|+++||..++........ ......+
T Consensus 13 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~----~~~~~~~ 88 (153)
T 3ox6_A 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAET----ADMIGVK 88 (153)
T ss_dssp HHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCC----HHHHCHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccc----cccccHH
Confidence 577899999999999999999999999887888889999999999999999999999999976542211 0111123
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC-------hHHHHHhcccCCChHHHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE-------PLLLEAFGQCLPSDAARQS 221 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 221 (229)
.+..+|+.+|.+++|.|+.+||..++... ..+..+|........|..+
T Consensus 89 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~ 143 (153)
T 3ox6_A 89 ELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVD 143 (153)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBC
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEe
Confidence 47889999999999999999999988651 2355566666555555443
No 143
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.50 E-value=4.4e-13 Score=91.66 Aligned_cols=101 Identities=20% Similarity=0.213 Sum_probs=87.0
Q ss_pred CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCChH
Q psy8447 51 GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTNE 127 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~~ 127 (229)
.++..++..+++.++. .+.|+..+|..++... ......+..+|+.+|.+++|.|+..||..++..+ ....+.
T Consensus 5 ~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~ 79 (109)
T 5pal_A 5 VLKADDINKAISAFKD--PGTFDYKRFFHLVGLK---GKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLND 79 (109)
T ss_dssp TSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT---TCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCH
T ss_pred cCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc---cCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCH
Confidence 3678889999998886 4459999999988642 2334447899999999999999999999999988 677888
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
+.+..+|+.+|.+++|.|+++||..++..
T Consensus 80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 80 TETKALLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 99999999999999999999999998864
No 144
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.50 E-value=1.2e-14 Score=127.60 Aligned_cols=134 Identities=10% Similarity=0.069 Sum_probs=63.1
Q ss_pred HHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHH
Q psy8447 57 VTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLI 136 (229)
Q Consensus 57 ~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~ 136 (229)
+.+++..|+....+.|+..+|..++..++...+..+ ++.+|+.+|.+++|.|+|+||+.++..+.. .++++.+|+.
T Consensus 13 l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~e-l~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~~el~~aF~~ 88 (624)
T 1djx_A 13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGY-ARKIFRECDHSQTDSLEDEEIETFYKMLTQ---RAEIDRAFEE 88 (624)
T ss_dssp --------------------------------------------------------CTTHHHHHHTC---CHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHH-HHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---HHHHHHHHHH
Confidence 333444444333334999999999998876555555 789999999999999999999999987743 3679999999
Q ss_pred hcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCC----CCCcccHHHHHHHHhcC
Q psy8447 137 YDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD----KDGKISFQDFQQSVTDE 202 (229)
Q Consensus 137 ~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~dg~Is~~ef~~~~~~~ 202 (229)
||.+ +|+|+.+||..+|....+. ...+++ .++.+++.+|.+ ++|.|+|++|..+|...
T Consensus 89 fD~~-~G~Is~~EL~~fL~~~qge---~~ls~e----e~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~ 150 (624)
T 1djx_A 89 AAGS-AETLSVERLVTFLQHQQRE---EEAGPA----LALSLIERYEPSETAKAQRQMTKDGFLMYLLSA 150 (624)
T ss_dssp HHTT-SSSEEHHHHHHHHHHTSCC---SSCSHH----HHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred hcCC-CCeecHHHHHHHHHHHhCC---CCCCHH----HHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence 9985 9999999999999865321 112333 377889999988 79999999999999854
No 145
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.49 E-value=1.8e-14 Score=109.25 Aligned_cols=122 Identities=16% Similarity=0.163 Sum_probs=87.3
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGV 171 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~ 171 (229)
..+..+|..+|.+++|.|+++||..++..+....+...+..+|..+|.+++|.|+++||..++...... ..
T Consensus 57 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~---------~~ 127 (197)
T 3pm8_A 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTY---------LK 127 (197)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHH---------CS
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhh---------hh
Confidence 336889999999999999999999999988766777899999999999999999999998876543211 11
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHhcC--------hHHHHHhcccCCChHHHHHH
Q psy8447 172 RDLVELALRKMDYDKDGKISFQDFQQSVTDE--------PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 172 ~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 222 (229)
++.+..+|+.+|.+++|.|+.+||..++... ..+-.+|........|..++
T Consensus 128 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~ 186 (197)
T 3pm8_A 128 KEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDF 186 (197)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEH
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcH
Confidence 2358889999999999999999999999865 23555677666665555443
No 146
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.49 E-value=9.3e-14 Score=101.30 Aligned_cols=122 Identities=15% Similarity=0.158 Sum_probs=96.7
Q ss_pred HHHHHHHHccCC-CCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHH
Q psy8447 94 MERIFCAFDRLC-DGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVR 172 (229)
Q Consensus 94 ~~~lf~~~d~~~-~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~ 172 (229)
+..+|..+|.++ +|.|+.+||..++..+....+...+..+|..+|.+++|.|+++||..++........ .....
T Consensus 20 l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~-----~~~~~ 94 (161)
T 1dtl_A 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDS-----KGKSE 94 (161)
T ss_dssp HHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC----------CHH
T ss_pred HHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccc-----cchHH
Confidence 678899999999 999999999999999887788889999999999999999999999999977542000 01223
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHH
Q psy8447 173 DLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 173 ~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~ 220 (229)
+.+..+|+.+|.+++|.|+.+||..++... ..+..+|....+...|..
T Consensus 95 ~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i 148 (161)
T 1dtl_A 95 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148 (161)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEE
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcE
Confidence 358889999999999999999999988643 234455665555554443
No 147
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.49 E-value=6.3e-14 Score=106.34 Aligned_cols=99 Identities=21% Similarity=0.321 Sum_probs=86.4
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|+.+|.+++|.|++.||..++..+....+...+..+|..+|.+++|.|+++||..++.... . ....+
T Consensus 39 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~--------~-~~~~~ 109 (204)
T 3e3r_A 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPM--------S-QAREA 109 (204)
T ss_dssp -CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCC--------C-HHHHH
T ss_pred HHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhc--------C-chHHH
Confidence 67899999999999999999999999988888889999999999999999999999998875321 1 12344
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.+..+|+.+|.+++|.|+.+||..++..
T Consensus 110 ~~~~~F~~~D~d~~G~I~~~El~~~l~~ 137 (204)
T 3e3r_A 110 VIAAAFAKLDRSGDGVVTVDDLRGVYSG 137 (204)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHCCC
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHcc
Confidence 6889999999999999999999999974
No 148
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.49 E-value=1.9e-13 Score=103.03 Aligned_cols=122 Identities=16% Similarity=0.135 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHH
Q psy8447 91 EILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEG 170 (229)
Q Consensus 91 ~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~ 170 (229)
...+..+|..+|.+++|.|+..||..++..+....+ ..+..+|..+|.+++|.|+++||..++..... .
T Consensus 51 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~----------~ 119 (191)
T 3k21_A 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ----------L 119 (191)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG----------C
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh----------c
Confidence 344788999999999999999999999998876666 78899999999999999999999988743221 1
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC-----------hHHHHHhcccCCChHHHHHHH
Q psy8447 171 VRDLVELALRKMDYDKDGKISFQDFQQSVTDE-----------PLLLEAFGQCLPSDAARQSFL 223 (229)
Q Consensus 171 ~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 223 (229)
..+.+..+|+.+|.+++|.|+.+||..++... ..+.++|........|..++.
T Consensus 120 ~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~ 183 (191)
T 3k21_A 120 SKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFH 183 (191)
T ss_dssp CHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHH
T ss_pred cHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHH
Confidence 12347889999999999999999999999652 135667777776666655443
No 149
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.48 E-value=5.4e-14 Score=105.83 Aligned_cols=117 Identities=20% Similarity=0.182 Sum_probs=93.6
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|+++||..++..+....+...+..+|..+|.+++|.|+++||..++..+..... . +
T Consensus 12 l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~-----~----~ 82 (188)
T 1s6i_A 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER-----E----E 82 (188)
T ss_dssp HHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC-----C----C
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCH-----H----H
Confidence 678999999999999999999999998877788889999999999999999999999998754321111 1 1
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAAR 219 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~ 219 (229)
.+..+|+.+|.+++|.|+.+||..++... ..+-.+|........|.
T Consensus 83 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~ 132 (188)
T 1s6i_A 83 NLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQ 132 (188)
T ss_dssp STHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSE
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCc
Confidence 26789999999999999999999998643 23455555555444443
No 150
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.48 E-value=1.7e-13 Score=99.91 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=97.9
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHH
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVR 172 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~ 172 (229)
.+..+|..+|.+++|.|++.||..++..+....+...+..+|..+|.+++|.|+++||..++....... ......
T Consensus 21 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~-----~~~~~~ 95 (162)
T 1top_A 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED-----AKGKSE 95 (162)
T ss_dssp HHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH-----HHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc-----cccccH
Confidence 367899999999999999999999999887778888999999999999999999999999987653210 000134
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHH
Q psy8447 173 DLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 173 ~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~ 220 (229)
+.+..+|+.+|.+++|.|+.+||..++... ..+..+|....+...|..
T Consensus 96 ~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i 149 (162)
T 1top_A 96 EELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRI 149 (162)
T ss_dssp HHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSB
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcC
Confidence 458889999999999999999999998643 234556666655544444
No 151
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.48 E-value=1.5e-13 Score=101.57 Aligned_cols=126 Identities=16% Similarity=0.218 Sum_probs=93.2
Q ss_pred HHHHHHHHccCCCCceeHHHHHH----HHHhhccCChHHHHH-----------HHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVL----GLSCFLRGTNEELIK-----------FTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~----~~~~~~~~~~~~~~~-----------~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
+..+|..+|.|++|.|++.||.. ++..+....+...+. .+|..+|.+++|.|+.+||..++....
T Consensus 9 l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~ 88 (176)
T 1nya_A 9 LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLI 88 (176)
T ss_dssp HHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence 68899999999999999999999 455555444444444 899999999999999999999998765
Q ss_pred hcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHHH
Q psy8447 159 ISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~~ 220 (229)
...... ...+.....+..+|+.+|.+++|.|+.+||..++... ..+..+|....+...|..
T Consensus 89 ~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i 153 (176)
T 1nya_A 89 FEQGEA-SFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGEL 153 (176)
T ss_dssp SSSCHH-HHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEE
T ss_pred cCCchh-hHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCC
Confidence 322100 0011224458899999999999999999999998753 234556666655554543
No 152
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.48 E-value=7.2e-14 Score=104.31 Aligned_cols=114 Identities=21% Similarity=0.171 Sum_probs=89.1
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGV 171 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~ 171 (229)
..+..+|..+|.+++|.|++.||..++..+. .+...+..+|..+|.+++|.|+++||..++..... . .
T Consensus 39 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~----~--~---- 106 (180)
T 3mse_B 39 KYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITYTEFMAGCYRWKN----I--E---- 106 (180)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT----C-------
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc----C--C----
Confidence 3478899999999999999999999998775 34578999999999999999999999988753211 0 1
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChH
Q psy8447 172 RDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDA 217 (229)
Q Consensus 172 ~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~ 217 (229)
++.+..+|+.+|.+++|.|+.+||..++... ..+.++|....+...
T Consensus 107 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d~~~d 156 (180)
T 3mse_B 107 STFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKK 156 (180)
T ss_dssp -CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhhhccC
Confidence 1247889999999999999999999999733 234555555554433
No 153
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.48 E-value=4.6e-13 Score=91.55 Aligned_cols=101 Identities=19% Similarity=0.189 Sum_probs=86.1
Q ss_pred cCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCCh
Q psy8447 50 SGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTN 126 (229)
Q Consensus 50 ~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~ 126 (229)
..++..++..++..++ ..+.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+ ....+
T Consensus 5 ~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~ 79 (109)
T 3fs7_A 5 DILSAKDIESALSSCQ--AADSFNYKSFFSTVGLS---SKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLT 79 (109)
T ss_dssp GTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT---TCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCC
T ss_pred CcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhcC---CCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCC
Confidence 3467888999999887 34459999999998752 2344447899999999999999999999999988 56778
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
.+.+..+|+.+|.+++|.|+++||..+++
T Consensus 80 ~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 80 SAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp HHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 88999999999999999999999998874
No 154
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.47 E-value=4.6e-14 Score=101.57 Aligned_cols=124 Identities=16% Similarity=0.155 Sum_probs=94.6
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHh-cCCCCCcccHHHHHHHHHHHhhc--CCCCCCChHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIY-DLNNDGFITREEMFQLLRNSLIS--HPQDEDPDEG 170 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~-D~~~~G~I~~~e~~~~l~~~~~~--~~~~~~~~~~ 170 (229)
+..+|..+|.+++|.|+..||..++..+....+...+..+|..+ |.+++|.|+++||..++...... ..... .
T Consensus 6 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~-~--- 81 (148)
T 1m45_A 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKA-K--- 81 (148)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCC-C---
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccc-c---
Confidence 35689999999999999999999999988788888999999999 99999999999999999765210 00000 1
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHHH
Q psy8447 171 VRDLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 171 ~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 222 (229)
.+.+..+|+.+|.+++|.|+.+||..++... ..+-.++........|..++
T Consensus 82 -~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~ 138 (148)
T 1m45_A 82 -TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 138 (148)
T ss_dssp -THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEH
T ss_pred -HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeH
Confidence 1247889999999999999999999998743 23556676666665555443
No 155
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.47 E-value=2.9e-13 Score=103.15 Aligned_cols=121 Identities=15% Similarity=0.143 Sum_probs=94.6
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhcc--CChHHHHHHHH-------HHhcCCCCCcccHHHHHHHHHH--------
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLR--GTNEELIKFTF-------LIYDLNNDGFITREEMFQLLRN-------- 156 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~--~~~~~~~~~~F-------~~~D~~~~G~I~~~e~~~~l~~-------- 156 (229)
+..+|..+|.+++|.|+..||..++..+.. ..+.+.+..+| ..+|.+++|.|+.+||..++..
T Consensus 38 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~ 117 (208)
T 2hpk_A 38 LYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERER 117 (208)
T ss_dssp HHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhhhhh
Confidence 678999999999999999999999998776 66777788888 9999999999999999999861
Q ss_pred HhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHHH
Q psy8447 157 SLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~~ 220 (229)
.... .+...++.+..+|+.+|.+++|.|+.+||..++... ..+-.+|........|..
T Consensus 118 ~~~~------~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I 179 (208)
T 2hpk_A 118 ERRG------EPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKL 179 (208)
T ss_dssp HHTT------CCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSB
T ss_pred hccC------ChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcC
Confidence 1111 112344457889999999999999999999998542 345556666555544443
No 156
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.46 E-value=6.3e-13 Score=99.28 Aligned_cols=135 Identities=15% Similarity=0.127 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCcc---CCCCCCHHHHHHHHhhhcCCCcHHH
Q psy8447 16 QEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPF---SFQGLDRVVFRELLHNTFDLVTEEI 92 (229)
Q Consensus 16 ~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~---d~~~i~~~ef~~~l~~~~~~~~~~~ 92 (229)
.++..++..|..++ ++| .+...++.... ....+...+..++..++.. +.+.|+..+|..++..+.. ....+
T Consensus 25 ~~~~~~~~~F~~~D--~dG--~I~~~el~~~l-g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~-~~~~~ 98 (179)
T 3a8r_A 25 DGWAAVEKRFNQLQ--VDG--VLLRSRFGKCI-GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTD-QGFDN 98 (179)
T ss_dssp CCHHHHHHHHHHHC--BTT--BEEGGGHHHHH-TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHC-CCHHH
T ss_pred hhHHHHHHHHhccC--CCC--CCcHHHHHHHH-CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcC-CCHHH
Confidence 35678889999998 343 36666666532 2334456778888887742 2334999999998876543 34455
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHH-hhccC-C------hHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLS-CFLRG-T------NEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~-~~~~~-~------~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
.+..+|+.||.|++|.|+.+|+..++. .+... . +.+.+..+|..+|.|++|.|+++||..++..
T Consensus 99 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~ 170 (179)
T 3a8r_A 99 RLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170 (179)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC-
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 589999999999999999999999998 55433 2 6678999999999999999999999998864
No 157
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.46 E-value=7.2e-13 Score=99.28 Aligned_cols=127 Identities=13% Similarity=0.149 Sum_probs=91.8
Q ss_pred HHHHHHHHccCCCCceeHHHHH-----HHHHhhccCChHH-----HHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCC
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWV-----LGLSCFLRGTNEE-----LIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQ 163 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~-----~~~~~~~~~~~~~-----~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~ 163 (229)
+..+|..+|.+++|.|++.||. .++..+....+.. .+..+|..+|.+++|.|+.+||..++.........
T Consensus 18 l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~ 97 (191)
T 1uhk_A 18 HKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELE 97 (191)
T ss_dssp HHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhh
Confidence 6789999999999999999999 6666665544444 68899999999999999999999988765321000
Q ss_pred --CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc------ChHHHHHhcccCCChHHHH
Q psy8447 164 --DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD------EPLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 164 --~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~------~~~~~~~~~~~~~~~~~~~ 220 (229)
.....+.+...++.+|+.+|.+++|.|+.+||..++.. ...+..+|........|..
T Consensus 98 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i 162 (191)
T 1uhk_A 98 KYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQL 162 (191)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCE
T ss_pred hhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcC
Confidence 00011122223458999999999999999999998853 1235556666655555544
No 158
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.45 E-value=7.6e-13 Score=99.53 Aligned_cols=128 Identities=15% Similarity=0.138 Sum_probs=88.2
Q ss_pred HHHHHHHHccCCCCceeHHHHH-----HHHHhhccCChHH-----HHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCC
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWV-----LGLSCFLRGTNEE-----LIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQ 163 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~-----~~~~~~~~~~~~~-----~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~ 163 (229)
+..+|..+|.|++|.|++.||. .++..+....+.. .+..+|..+|.+++|.|+++||..++.........
T Consensus 22 l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~ 101 (195)
T 1qv0_A 22 HKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELK 101 (195)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhh
Confidence 5788999999999999999999 5565554444443 58899999999999999999999988765321000
Q ss_pred --CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc------ChHHHHHhcccCCChHHHHH
Q psy8447 164 --DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD------EPLLLEAFGQCLPSDAARQS 221 (229)
Q Consensus 164 --~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~------~~~~~~~~~~~~~~~~~~~~ 221 (229)
.....+.+...+..+|+.+|.+++|.|+.+||..++.. ...+..+|........|..+
T Consensus 102 ~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~ 167 (195)
T 1qv0_A 102 KWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLD 167 (195)
T ss_dssp HHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEE
T ss_pred cccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCC
Confidence 00011123334558999999999999999999999863 22355566666655555443
No 159
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.45 E-value=2.8e-13 Score=112.04 Aligned_cols=120 Identities=18% Similarity=0.225 Sum_probs=95.3
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
++.+|+.+|.|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+++||..++...... . ..++
T Consensus 304 LREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~----~----d~ee 375 (440)
T 3u0k_A 304 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKD----T----DSEE 375 (440)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC--------------CH
T ss_pred HHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC----C----ChHH
Confidence 5789999999999999999999999999888889999999999999999999999999887543211 1 1122
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQS 221 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~ 221 (229)
.+..+|+.+|.+++|.|+.+||..++... ..+.++|........|..+
T Consensus 376 eLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIs 429 (440)
T 3u0k_A 376 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 429 (440)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEE
T ss_pred HHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEe
Confidence 47789999999999999999999988632 2355566666655555443
No 160
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.44 E-value=1.6e-12 Score=88.83 Aligned_cols=100 Identities=22% Similarity=0.214 Sum_probs=84.5
Q ss_pred CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCChH
Q psy8447 51 GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTNE 127 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~~ 127 (229)
.++..++..++..++ ..+.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+ ....+.
T Consensus 6 ~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 80 (109)
T 1bu3_A 6 ILADADVAAALKACE--AADSFNYKAFFAKVGLT---AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTD 80 (109)
T ss_dssp SSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCH
T ss_pred cCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC---hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCH
Confidence 467788889988887 34459999999988642 2334447899999999999999999999999988 566788
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+.+..+|+.+|.+++|.|+++||..++.
T Consensus 81 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 81 AETKAFLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 8999999999999999999999998763
No 161
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.44 E-value=9.1e-13 Score=95.15 Aligned_cols=104 Identities=19% Similarity=0.186 Sum_probs=90.7
Q ss_pred CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHH
Q psy8447 52 LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIK 131 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~ 131 (229)
++..++..++..++....+.|+..+|...+..........+.+..+|+.+|.+++|.|+..||..++..+....+...+.
T Consensus 43 ~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~ 122 (148)
T 2lmt_A 43 PTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122 (148)
T ss_dssp CCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHH
T ss_pred chHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHH
Confidence 45677888888888777677999999998887655555555588999999999999999999999999998888999999
Q ss_pred HHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 132 FTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 132 ~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
.+|+.+|.|++|.|+++||.+++.
T Consensus 123 ~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 123 EMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp HHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred HHHHHhCCCCCCeEeHHHHHHHHh
Confidence 999999999999999999998874
No 162
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.44 E-value=1.3e-12 Score=93.70 Aligned_cols=120 Identities=17% Similarity=0.150 Sum_probs=95.4
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHh---cCCCCCcccHHHHHHHHHHHhhcCCCCCCChHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIY---DLNNDGFITREEMFQLLRNSLISHPQDEDPDEG 170 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~---D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~ 170 (229)
+..+|..+|.+++|.|++.||..++..+....+...+..+|..+ |.++ |.|+++||..++....... .. .
T Consensus 10 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~--~~----~ 82 (149)
T 2mys_C 10 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNK--DQ----G 82 (149)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccC--Cc----c
Confidence 67899999999999999999999999887777888999999999 9999 9999999999987652111 11 1
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHH
Q psy8447 171 VRDLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQS 221 (229)
Q Consensus 171 ~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~ 221 (229)
....+..+|+.+|.+++|.|+.+||..++... ..+-.+|.. .+...|..+
T Consensus 83 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~ 138 (149)
T 2mys_C 83 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCIN 138 (149)
T ss_pred hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEe
Confidence 23347889999999999999999999998642 235556666 555545443
No 163
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.44 E-value=4.1e-13 Score=90.53 Aligned_cols=65 Identities=26% Similarity=0.522 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
.++++.+|+.||.|++|+|+.+||..+++.++......+ ++.+++.+|.|++|.|+|+||+.+|.
T Consensus 35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~e---------i~~l~~~~D~d~dG~I~~~EF~~~m~ 99 (100)
T 2lv7_A 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVE---------LEVIIQRLDMDGDGQVDFEEFVTLLG 99 (100)
T ss_dssp HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTT---------HHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHH---------HHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence 357889999999999999999999999999876544333 77899999999999999999998763
No 164
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.44 E-value=1.5e-13 Score=98.04 Aligned_cols=131 Identities=15% Similarity=0.141 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCC--ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCc--HHHH
Q psy8447 18 VETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGL--PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVT--EEIL 93 (229)
Q Consensus 18 i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~--~~~~ 93 (229)
+..++..|..++.+++|. +...++....+..+. +..++..++. ...+.|+..+|..++........ ....
T Consensus 4 ~~~l~~~F~~~D~d~~G~--i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~ 77 (140)
T 1ggw_A 4 DSPYKQAFSLFDRHGTGR--IPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEE 77 (140)
T ss_dssp CTTTHHHHHHTCSSSSSE--ECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHH
T ss_pred HHHHHHHHHHHCCCCCCc--CCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHH
Confidence 345778899998877765 777777777776654 5567777765 22334999999999987654322 2345
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+|. ++|.|+++||..++.
T Consensus 78 ~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 78 FVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 7899999999999999999999999998877888999999999999 999999999998874
No 165
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.44 E-value=9.1e-13 Score=117.86 Aligned_cols=163 Identities=10% Similarity=0.075 Sum_probs=140.6
Q ss_pred cCcHHH-HHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhc----------CCChhHHHHHHhccCccCCCCCCHHHHHHH
Q psy8447 12 LSFRQE-VETLCKIFKKLLNSSSNAGVPISTSTPVVVQVS----------GLPPSNVTERYKGFSPFSFQGLDRVVFREL 80 (229)
Q Consensus 12 ~~~~~~-i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~----------~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~ 80 (229)
.+++++ +..++..|..++ +++|. +...++..+.... .++..++..++..++....+.|+..||..+
T Consensus 524 ~ls~~e~~~~l~~~F~~~D-d~dG~--Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l 600 (714)
T 3bow_A 524 EANEEDIGDGFRRLFAQLA-GEDAE--ISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL 600 (714)
T ss_dssp CCSGGGCCHHHHHHHHHHH-GGGTS--BCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHH
T ss_pred CCChhhHHHHHHHHHHHHc-CCCCc--CCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 478888 999999999999 77665 7778887776664 678899999999998877677999999999
Q ss_pred HhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhc
Q psy8447 81 LHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLIS 160 (229)
Q Consensus 81 l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~ 160 (229)
+... ..+..+|+.+|.|++|.|+.+||..++..+....+.+.+..+|..+| |++|.|+++||..++...
T Consensus 601 ~~~~-------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~--- 669 (714)
T 3bow_A 601 WTKI-------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL--- 669 (714)
T ss_dssp HHHH-------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHH---
T ss_pred HHHH-------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH---
Confidence 8864 34789999999999999999999999998877778899999999999 999999999999998653
Q ss_pred CCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 161 HPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
+.+..+|+.+|.+++|.|+.+++..++.
T Consensus 670 ------------~~l~~~F~~~D~d~dG~Is~~el~~l~~ 697 (714)
T 3bow_A 670 ------------EILFKIFKQLDPENTGTIQLDLISWLSF 697 (714)
T ss_dssp ------------HHHHHHHSSSCSSCCSEEEEEHHHHHHH
T ss_pred ------------HHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence 1377899999999999999999887654
No 166
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.43 E-value=3e-12 Score=87.41 Aligned_cols=100 Identities=21% Similarity=0.227 Sum_probs=84.6
Q ss_pred CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCChH
Q psy8447 51 GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTNE 127 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~~ 127 (229)
.++..++..++..++ ..+.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+ ....+.
T Consensus 5 ~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 79 (109)
T 1rwy_A 5 LLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA 79 (109)
T ss_dssp HSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCH
T ss_pred cCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC---cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCH
Confidence 367788888888887 33449999999988542 2334457899999999999999999999999988 556778
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+.+..+|..+|.+++|.|+++||..++.
T Consensus 80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 80 KETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 8999999999999999999999999875
No 167
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.42 E-value=4.6e-13 Score=98.12 Aligned_cols=100 Identities=22% Similarity=0.202 Sum_probs=85.7
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|++.||..++..+....+...+..+|..+|.+++|.|+..||..++...... ...+
T Consensus 29 l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~---------~~~~ 99 (166)
T 2aao_A 29 LKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKI---------ERED 99 (166)
T ss_dssp HHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHH---------HTTH
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhc---------ccHH
Confidence 6789999999999999999999999998777788889999999999999999999999988543211 1123
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
.+..+|+.+|.+++|.|+.+||..++...
T Consensus 100 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~ 128 (166)
T 2aao_A 100 HLFAAFTYFDKDGSGYITPDELQQACEEF 128 (166)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHTCC-
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence 47889999999999999999999998754
No 168
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.42 E-value=2.3e-12 Score=87.89 Aligned_cols=99 Identities=20% Similarity=0.205 Sum_probs=83.5
Q ss_pred CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCChHH
Q psy8447 52 LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTNEE 128 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~~~ 128 (229)
++..++..++..++ ..+.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+ ....+.+
T Consensus 6 ~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~ 80 (108)
T 2pvb_A 6 LKDADVAAALAACS--AADSFKHKEFFAKVGLA---SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA 80 (108)
T ss_dssp SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG---GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC---hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHH
Confidence 56788888888887 33449999999988642 2334447899999999999999999999999988 5567888
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 129 LIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 129 ~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
.+..+|..+|.+++|.|+++||..++.
T Consensus 81 ~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 81 ETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 999999999999999999999998874
No 169
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.42 E-value=5.4e-13 Score=97.55 Aligned_cols=125 Identities=22% Similarity=0.198 Sum_probs=90.1
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHh----hccCChHHHH-----------HHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSC----FLRGTNEELI-----------KFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~----~~~~~~~~~~-----------~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
+..+|..+|.|++|.|++.||..++.. +....+...+ ..+|..+|.+++|.|+.+||..++....
T Consensus 6 l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~ 85 (166)
T 3akb_A 6 IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAVKRL 85 (166)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHHHHH
T ss_pred HHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 688999999999999999999998643 2333333333 3568999999999999999999988764
Q ss_pred hcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHHH
Q psy8447 159 ISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~~ 220 (229)
...... ..+...+.+..+|+.+|.+++|.|+.+||..++... ..+..+|........|..
T Consensus 86 ~~~~~~--~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~~~~~~D~d~dg~i 149 (166)
T 3akb_A 86 RDKPDR--FAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKV 149 (166)
T ss_dssp HHSHHH--HHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSBC
T ss_pred ccCccc--hHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCcC
Confidence 321000 001123348889999999999999999999998753 235556666555544444
No 170
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.42 E-value=4.4e-13 Score=115.55 Aligned_cols=122 Identities=19% Similarity=0.264 Sum_probs=98.0
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhc--------cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCC
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFL--------RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQ 163 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~--------~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~ 163 (229)
..+..+|+.+|.|++|.|+++||..++..+. .......+..+|..+|.|++|.|+++||..++.......
T Consensus 355 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~-- 432 (504)
T 3q5i_A 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILF-- 432 (504)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHT--
T ss_pred HHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhccc--
Confidence 3468899999999999999999999988873 246678999999999999999999999999886442211
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHHHHH
Q psy8447 164 DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 222 (229)
.++.+..+|+.+|.|++|.|+.+||..++... ..+-++|........|..++
T Consensus 433 -------~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~ 488 (504)
T 3q5i_A 433 -------SEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDF 488 (504)
T ss_dssp -------CHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHHHHHTTCSSCSSSEEH
T ss_pred -------CHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHHHHHHhCCCCCCcEeH
Confidence 12347889999999999999999999998742 24666777777666665543
No 171
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.41 E-value=4.6e-13 Score=115.16 Aligned_cols=123 Identities=20% Similarity=0.236 Sum_probs=97.9
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhcc--------CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCC
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR--------GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQ 163 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~--------~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~ 163 (229)
..++.+|+.+|.|++|.|+++||..++..+.. ......+..+|+.+|.|++|.|+++||..++.......
T Consensus 346 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~-- 423 (494)
T 3lij_A 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLL-- 423 (494)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHT--
T ss_pred HHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccc--
Confidence 34788999999999999999999999988754 33467899999999999999999999999875442211
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc----ChHHHHHhcccCCChHHHHHHH
Q psy8447 164 DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD----EPLLLEAFGQCLPSDAARQSFL 223 (229)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 223 (229)
..+.+..+|+.+|.|++|.|+.+||..++.. ...+.++|......+.|..++.
T Consensus 424 -------~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~ 480 (494)
T 3lij_A 424 -------SKDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFE 480 (494)
T ss_dssp -------CHHHHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHHHHHTTCSSSSSSEEHH
T ss_pred -------cHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCcCCHH
Confidence 1224788999999999999999999999874 2356777887777766665443
No 172
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.40 E-value=2.5e-13 Score=97.99 Aligned_cols=122 Identities=13% Similarity=0.127 Sum_probs=95.3
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCC--CCCcccHHHHHHHHHHHhhcCCCCCCChHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLN--NDGFITREEMFQLLRNSLISHPQDEDPDEGV 171 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~--~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~ 171 (229)
+..+|..+|.+++|.|++.||..++..+....+...+..+|..+|.+ ++|.|+++||..++......... ..
T Consensus 12 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~------~~ 85 (151)
T 1w7j_B 12 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ------GT 85 (151)
T ss_dssp HHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC------------
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCC------Cc
Confidence 67899999999999999999999999887777888999999999999 99999999999999875321110 11
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHHH
Q psy8447 172 RDLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 172 ~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 222 (229)
.+.+..+|+.+|.+++|.|+.+||..++... ..+-.+|.... ...|..++
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~ 141 (151)
T 1w7j_B 86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINY 141 (151)
T ss_dssp --CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeH
Confidence 1236679999999999999999999998643 23555666655 55554433
No 173
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.39 E-value=4.8e-12 Score=86.49 Aligned_cols=100 Identities=19% Similarity=0.199 Sum_probs=84.1
Q ss_pred CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCChH
Q psy8447 51 GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTNE 127 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~~ 127 (229)
.++..++..++..++ ..+.|+..+|..++.. .......+..+|+.+|.+++|.|+.+||..++..+ ....+.
T Consensus 6 ~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 80 (110)
T 1pva_A 6 LLKADDIKKALDAVK--AEGSFNHKKFFALVGL---KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTD 80 (110)
T ss_dssp HSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC---TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCH
T ss_pred cCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc---CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCH
Confidence 367788888888887 3345999999998853 12334447899999999999999999999999988 456778
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+.+..+|..+|.+++|.|+++||..++.
T Consensus 81 ~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 81 AETKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 8999999999999999999999999875
No 174
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.39 E-value=2.8e-12 Score=87.48 Aligned_cols=100 Identities=18% Similarity=0.142 Sum_probs=83.5
Q ss_pred CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCChH
Q psy8447 51 GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTNE 127 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~~ 127 (229)
.++..+++.++..++ ..+.|+..+|..++... ......+..+|+.+|.+++|.|+..||..++..+ ....+.
T Consensus 5 ~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 79 (108)
T 1rro_A 5 ILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS---KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTE 79 (108)
T ss_dssp TSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG---GSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCH
T ss_pred cCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC---cccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCH
Confidence 467888889888887 33449999999987532 2334447899999999999999999999999887 455778
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+.+..+|..+|.+++|.|+++||..++.
T Consensus 80 ~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 80 SETKSLMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp HHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 8999999999999999999999998763
No 175
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.39 E-value=9.5e-13 Score=93.71 Aligned_cols=101 Identities=11% Similarity=0.004 Sum_probs=67.6
Q ss_pred HHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc-cCChHHHHHHHHHH
Q psy8447 58 TERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLI 136 (229)
Q Consensus 58 ~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~-~~~~~~~~~~~F~~ 136 (229)
++++..++....+.|+..+|..++............+..+|+.+|.+++|.|+.+||..++..+. ...+.+.+..+|..
T Consensus 6 ~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~ 85 (135)
T 3h4s_E 6 KSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVRE 85 (135)
T ss_dssp -------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 44555555555555999999998876543333445578999999999999999999999999888 47888999999999
Q ss_pred hcCCCCCcccHHHHHHHHHHHh
Q psy8447 137 YDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 137 ~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
+|.|++|.|+++||..++....
T Consensus 86 ~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 86 GDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HCSSCSSSBCHHHHHHHHHHHH
T ss_pred hCCCCCCCCcHHHHHHHHHHhC
Confidence 9999999999999999998753
No 176
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.38 E-value=3e-12 Score=95.30 Aligned_cols=143 Identities=15% Similarity=0.155 Sum_probs=124.6
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCC--ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCC
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGL--PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLV 88 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~ 88 (229)
+.||++++..+++.|..++.+++|. +...++..+.+..++ +..++..++..++....+.|+..+|..++.......
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~--I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~ 80 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGS--ISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN 80 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSC--BCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSS
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccC
Confidence 6789999999999999999887776 888888888877765 567888888888877777799999999888766555
Q ss_pred cHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 89 ~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
...+.+..+|+.||.|++|.|+.+||..++..+....+++.+..+++.+| |++|.|+++||+++|..
T Consensus 81 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k 147 (176)
T 2lhi_A 81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK 147 (176)
T ss_dssp HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTC
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHh
Confidence 55666889999999999999999999999999888888999999999999 99999999999999853
No 177
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.38 E-value=3.8e-12 Score=93.83 Aligned_cols=121 Identities=13% Similarity=0.117 Sum_probs=91.8
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhc----cCChHHH-H--------HHHHHHhcCCCCCcccHHHHHHHHHHHhhc
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFL----RGTNEEL-I--------KFTFLIYDLNNDGFITREEMFQLLRNSLIS 160 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~----~~~~~~~-~--------~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~ 160 (229)
+..+|..+|.+++|.|+.+||..++..+. ...+... + ..+|..+| ++|.|+.+||..++.....
T Consensus 8 l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~~- 84 (174)
T 1q80_A 8 MKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMVK- 84 (174)
T ss_dssp HHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHTT-
T ss_pred HHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHcC-
Confidence 67899999999999999999999999876 4555444 4 46789999 8999999999999887643
Q ss_pred CCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHHH
Q psy8447 161 HPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~~ 220 (229)
...........+..+|+.+|.+++|.|+.+||..++... ..+-.+|........|..
T Consensus 85 ---~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i 145 (174)
T 1q80_A 85 ---NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLL 145 (174)
T ss_dssp ---STTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHHHHHHCTTCSSSB
T ss_pred ---cccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCceE
Confidence 111223344568899999999999999999999998642 234555655555544443
No 178
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.38 E-value=3.5e-14 Score=93.18 Aligned_cols=86 Identities=22% Similarity=0.234 Sum_probs=65.9
Q ss_pred CCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcC
Q psy8447 104 LCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMD 183 (229)
Q Consensus 104 ~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 183 (229)
|++|.|+|+|+ .+...........++.+|..+|.+++|+|+.+|+..+++.++... +++ .+..+++.+|
T Consensus 1 ~~~G~i~~~e~--~~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-----~~~----~~~~l~~~~d 69 (87)
T 1s6j_A 1 HSSGHIDDDDK--HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL-----MES----EIKDLMDAAD 69 (87)
T ss_dssp CCSSSSSSHHH--HSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSC-----CHH----HHHHHHHHHC
T ss_pred CCCCccCccHH--HHHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhC
Confidence 57899999992 222222233345688999999999999999999999998765322 222 3778999999
Q ss_pred CCCCCcccHHHHHHHHh
Q psy8447 184 YDKDGKISFQDFQQSVT 200 (229)
Q Consensus 184 ~~~dg~Is~~ef~~~~~ 200 (229)
.+++|.|+|+||+.++.
T Consensus 70 ~~~~g~i~~~eF~~~~~ 86 (87)
T 1s6j_A 70 IDKSGTIDYGEFIAATV 86 (87)
T ss_dssp TTCSSEECHHHHTTCCC
T ss_pred CCCCCcCcHHHHHHHHh
Confidence 99999999999987653
No 179
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.37 E-value=2.8e-12 Score=109.97 Aligned_cols=121 Identities=20% Similarity=0.289 Sum_probs=95.3
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhcc----CCh-------HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcC
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLR----GTN-------EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISH 161 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~----~~~-------~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~ 161 (229)
.+..+|..+|.|++|.|+++||..++..... ..+ +..+..+|..+|.|++|.|+++||..++.....
T Consensus 336 ~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~-- 413 (484)
T 3nyv_A 336 ELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKT-- 413 (484)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHH--
T ss_pred HHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccc--
Confidence 3688999999999999999999776665533 222 678999999999999999999999999876522
Q ss_pred CCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC----hHHHHHhcccCCChHHHHHH
Q psy8447 162 PQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE----PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 222 (229)
...++.+..+|+.+|.|+||.|+.+||..++... ..+-++|........|..++
T Consensus 414 -------~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~ 471 (484)
T 3nyv_A 414 -------LLSRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDF 471 (484)
T ss_dssp -------HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEH
T ss_pred -------cCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCH
Confidence 1233458889999999999999999999999742 24566777777666665543
No 180
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.34 E-value=1.3e-11 Score=89.08 Aligned_cols=141 Identities=20% Similarity=0.064 Sum_probs=115.0
Q ss_pred cHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHH
Q psy8447 14 FRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEIL 93 (229)
Q Consensus 14 ~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~ 93 (229)
|++++..++..|..++.+++|. ++..++. .....+..+ .+..++..++....+.|+..+|..++............
T Consensus 1 s~~~~~~l~~~F~~~D~d~~G~--i~~~el~-~l~~~~~~~-~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~ 76 (155)
T 3ll8_B 1 DADEIKRLGKRFKKLDLDNSGS--LSVEEFM-SLPELQQNP-LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQK 76 (155)
T ss_dssp CCHHHHHHHHHHHHHCTTCSSS--BCHHHHT-TSGGGTTCT-THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHH
T ss_pred CHHHHHHHHHHHHHhCcCCCCe--EcHHHHH-Hhhccccch-HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHH
Confidence 4678999999999999887765 6666663 333334333 78888888887776779999999999987665566677
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHh-hccCChHHHHHHHHHH----hcCCCCCcccHHHHHHHHHHHh
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSC-FLRGTNEELIKFTFLI----YDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~-~~~~~~~~~~~~~F~~----~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
+..+|+.+|.+++|.|+.+||..++.. .....+...+..+|.. +|.+++|.|+++||..++..+.
T Consensus 77 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 899999999999999999999999988 4566667777777776 9999999999999999998753
No 181
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.34 E-value=1.8e-11 Score=89.65 Aligned_cols=141 Identities=12% Similarity=0.062 Sum_probs=119.3
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCC---ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGL---PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD 86 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~ 86 (229)
...++++++..++..|..++.+++|. +...++..+.+..+. +..++..++... .+.|+..+|..++.....
T Consensus 16 ~~~l~~~~~~~l~~~F~~~D~d~~G~--i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~ 89 (166)
T 2mys_B 16 FSMFDETEIEDFKEAFTVIDQNADGI--IDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLK 89 (166)
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCc--CCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhc
Confidence 46789999999999999999877765 777888877777654 567777777654 345999999999987654
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
.......+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+|.|++|.|+++||..++..
T Consensus 90 ~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~ 159 (166)
T 2mys_B 90 GADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 159 (166)
T ss_pred cCCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence 4445556899999999999999999999999998877788899999999999999999999999999864
No 182
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.33 E-value=1.2e-11 Score=89.63 Aligned_cols=104 Identities=15% Similarity=0.087 Sum_probs=88.0
Q ss_pred CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCC-CcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHH
Q psy8447 52 LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDL-VTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELI 130 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~-~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~ 130 (229)
++..++..+ ..++....+.|+..+|..++...... ......+..+|+.+|.+++|.|+..||..++..+....+.+.+
T Consensus 44 ~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~ 122 (156)
T 1wdc_C 44 PRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 122 (156)
T ss_dssp CCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHH
T ss_pred CCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHH
Confidence 455677777 77766555569999999999887552 3444557899999999999999999999999988777888999
Q ss_pred HHHHHH--hcCCCCCcccHHHHHHHHHH
Q psy8447 131 KFTFLI--YDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 131 ~~~F~~--~D~~~~G~I~~~e~~~~l~~ 156 (229)
..+|.. +|.+++|.|+++||..++..
T Consensus 123 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 123 DEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp HHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 999999 99999999999999999864
No 183
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.32 E-value=5e-12 Score=106.44 Aligned_cols=123 Identities=17% Similarity=0.222 Sum_probs=97.5
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGV 171 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~ 171 (229)
..+..+|+.+|.+++|.|+.+||..++..+....+.+.++.+|..+|.|++|.|+++||..++....... ..
T Consensus 312 ~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~--------~~ 383 (450)
T 3sg6_A 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT--------DS 383 (450)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC--------------C
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhcccc--------ch
Confidence 3468899999999999999999999999988888889999999999999999999999999986542211 11
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHHH
Q psy8447 172 RDLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 172 ~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 222 (229)
.+.+..+|+.+|.+++|.|+.+||..++... ..+..+|........|..++
T Consensus 384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~Isf 440 (450)
T 3sg6_A 384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 440 (450)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEH
T ss_pred hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeH
Confidence 2347889999999999999999999998632 23555666666555554443
No 184
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=99.32 E-value=2.7e-12 Score=82.23 Aligned_cols=72 Identities=28% Similarity=0.398 Sum_probs=59.8
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLE 207 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~ 207 (229)
++++.+|+.+|.+++|+|+.+|+..+++.++ .. +++ .+..++..+|.+++|.|+|+||..++...+.+.+
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~-----~~~----~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~ 72 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-ST-----SAD----EVQRMMAEIDTDGDGFIDFNEFISFCNANPGLMK 72 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TC-----CHH----HHHHHHHHHCTTCSSSEEHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CC-----CHH----HHHHHHHHhCCCCCCeEcHHHHHHHHHHCchhHH
Confidence 4678899999999999999999999998875 22 222 3778999999999999999999999998887665
Q ss_pred Hh
Q psy8447 208 AF 209 (229)
Q Consensus 208 ~~ 209 (229)
.+
T Consensus 73 ~~ 74 (78)
T 1k9u_A 73 DV 74 (78)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 185
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.31 E-value=1.4e-11 Score=89.66 Aligned_cols=104 Identities=16% Similarity=0.059 Sum_probs=86.4
Q ss_pred CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhc--CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHH
Q psy8447 52 LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTF--DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEEL 129 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~--~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 129 (229)
++..++..++..++. +.+.|+..+|..++.... ........+..+|+.+|.+++|.|+..||..++..+....+.+.
T Consensus 44 ~~~~~~~~l~~~~d~-~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~ 122 (159)
T 2ovk_C 44 PTEAQVHQHGGTKKM-GEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQ 122 (159)
T ss_dssp CCHHHHHHTTCCSST-TSCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHH
T ss_pred CCHHHHHHHHHHhcC-CCCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHH
Confidence 466778888888765 334499999999985432 22334455789999999999999999999999999888888999
Q ss_pred HHHHHH--HhcCCCCCcccHHHHHHHHHH
Q psy8447 130 IKFTFL--IYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 130 ~~~~F~--~~D~~~~G~I~~~e~~~~l~~ 156 (229)
+..+|. .+|.+++|.|+++||..++..
T Consensus 123 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 151 (159)
T 2ovk_C 123 CNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp HHHHHHHTTCCCCTTCCEEHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCcEeHHHHHHHHhc
Confidence 999999 889999999999999999864
No 186
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.31 E-value=2.9e-12 Score=115.27 Aligned_cols=140 Identities=11% Similarity=0.033 Sum_probs=91.2
Q ss_pred hHHHHHHh--ccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHcc-------CCCCceeHHHHHHHHHhhccCC
Q psy8447 55 SNVTERYK--GFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDR-------LCDGVIHLDEWVLGLSCFLRGT 125 (229)
Q Consensus 55 ~~~~~l~~--~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~-------~~~g~I~~~ef~~~~~~~~~~~ 125 (229)
..+++.|. .|+....+.|+..++..++.. .. ..++.+++.+|. +++|.|+|+||+.++..+..
T Consensus 146 ~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~-~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~-- 217 (799)
T 2zkm_X 146 TFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DR-KRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP-- 217 (799)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CH-HHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC--
T ss_pred HHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hH-HHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC--
Confidence 44566665 566555556999999998864 23 447889998884 78899999999999988753
Q ss_pred hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcC-CCCCCChHHHHHHHHHHHHHcCCC----CCCcccHHHHHHHHh
Q psy8447 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMDYD----KDGKISFQDFQQSVT 200 (229)
Q Consensus 126 ~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~----~dg~Is~~ef~~~~~ 200 (229)
.+.++.+|+.||.+++|+|+.+||+.+|....+.. ..+...+..-.+.++++++.+|.+ ++|.|+|++|..+|.
T Consensus 218 -r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L~ 296 (799)
T 2zkm_X 218 -RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLC 296 (799)
T ss_dssp -CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHH
T ss_pred -HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhccc
Confidence 46789999999999999999999999998863211 111000001122377899999998 899999999999998
Q ss_pred cCh
Q psy8447 201 DEP 203 (229)
Q Consensus 201 ~~~ 203 (229)
...
T Consensus 297 S~~ 299 (799)
T 2zkm_X 297 GPE 299 (799)
T ss_dssp STT
T ss_pred Ccc
Confidence 653
No 187
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.30 E-value=2.7e-11 Score=88.60 Aligned_cols=112 Identities=16% Similarity=0.138 Sum_probs=85.4
Q ss_pred hhhhHhhcCC--ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCC--CcHHHHHHHHHHHHccCCCCceeHHHHHHHH
Q psy8447 43 TPVVVQVSGL--PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDL--VTEEILMERIFCAFDRLCDGVIHLDEWVLGL 118 (229)
Q Consensus 43 ~~~~~~~~~l--~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~--~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~ 118 (229)
+..+.+.+|+ +..++..+... +....+.|+..+|..++...... ....+.+..+|+.||.+++|.|+..||..++
T Consensus 33 l~~~lr~lG~~~t~~el~~~~~~-d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l 111 (159)
T 3i5g_C 33 VGDLLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVL 111 (159)
T ss_dssp HHHHHHHTTCCCCHHHHHTTTCC-SSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHHHcc-cccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHH
Confidence 4444455444 44556554332 22222339999999998876442 2334447889999999999999999999999
Q ss_pred HhhccCChHHHHHHHHHHhcC--CCCCcccHHHHHHHHH
Q psy8447 119 SCFLRGTNEELIKFTFLIYDL--NNDGFITREEMFQLLR 155 (229)
Q Consensus 119 ~~~~~~~~~~~~~~~F~~~D~--~~~G~I~~~e~~~~l~ 155 (229)
..+....+.+.+..+++.+|. |++|.|+++||.++|.
T Consensus 112 ~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~ 150 (159)
T 3i5g_C 112 KMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVM 150 (159)
T ss_dssp HHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHH
Confidence 999888899999999999995 8899999999998875
No 188
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=99.29 E-value=7.2e-12 Score=84.31 Aligned_cols=73 Identities=22% Similarity=0.236 Sum_probs=57.4
Q ss_pred HHHHHHHHHhc-CCCC-CcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChH
Q psy8447 128 ELIKFTFLIYD-LNND-GFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~-G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
..++.+|+.|| .||+ |+|+.+|+..+++..+........+++ .++.+++.+|.|+||.|+|+||+.++.....
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~----ev~~~i~~~D~dgDG~Idf~EF~~~~~~~~~ 84 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFREC----DYNKFMSVLDTNKDCEVDFVEYVRSLACLCL 84 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHH----HHHHHHHHHHHCCCSCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHH----HHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 56889999998 8887 999999999999863322222333443 3788999999999999999999998876543
No 189
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=99.29 E-value=1.1e-12 Score=95.11 Aligned_cols=109 Identities=13% Similarity=0.087 Sum_probs=76.3
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGV 171 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~ 171 (229)
..++.++..+|.+++ |.+|..+ ....+.++.+|..||.+++|+|+.+|+..++..++... +++
T Consensus 24 ~~~~~i~~~~d~~~~----~~~~~~l------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~-----~~~-- 86 (150)
T 2jjz_A 24 RRLAEINREFLCDQK----YSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPK-----THL-- 86 (150)
T ss_dssp HHHHHHHHHHHTCGG----GSSCTTH------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCC-----CHH--
T ss_pred HHHHHHHHHhccCCC----chhhHhH------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCC-----CHH--
Confidence 347888888887664 2222222 12346788999999999999999999999998775322 232
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHhc-ChHHHHHhcccCCChHHH
Q psy8447 172 RDLVELALRKMDYDKDGKISFQDFQQSVTD-EPLLLEAFGQCLPSDAAR 219 (229)
Q Consensus 172 ~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~-~~~~~~~~~~~~~~~~~~ 219 (229)
.++.++..+|.+++|.|+|+||+.++.. .+.+..+|..+...+.|.
T Consensus 87 --e~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~~D~d~~G~ 133 (150)
T 2jjz_A 87 --EMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFEGKANES 133 (150)
T ss_dssp --HHHHHHHHHHTTSCSSBCHHHHHHHHHSSSCCHHHHHHC--------
T ss_pred --HHHHHHHHHCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHcCCCCCC
Confidence 3777899999999999999999998876 566888888887666665
No 190
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.29 E-value=5.6e-12 Score=91.14 Aligned_cols=114 Identities=14% Similarity=0.189 Sum_probs=89.3
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|+..||..++..+....+...+..++..+ +|.|+++||..++........ .. +
T Consensus 18 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~----~~----~ 85 (153)
T 2ovk_B 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTD----PE----D 85 (153)
T ss_dssp HHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCC----CT----T
T ss_pred HHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCC----hH----H
Confidence 67889999999999999999999999888888888999999888 899999999988864322111 11 1
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHH
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~ 220 (229)
.+..+|+.+|.+++|.|+.+||..++... ..+..++....+ ..|..
T Consensus 86 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~I 137 (153)
T 2ovk_B 86 ALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQF 137 (153)
T ss_dssp HHHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHCCE-ETTEE
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCC-CCCEE
Confidence 37889999999999999999999999643 234445555544 44443
No 191
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.28 E-value=3.2e-12 Score=109.69 Aligned_cols=122 Identities=25% Similarity=0.309 Sum_probs=83.8
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhcc--------------CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR--------------GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~--------------~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
..+..+|..+|.|++|.|+++||..++..+.. ....+.+..+|..+|.|++|.|+++||..++...
T Consensus 331 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~ 410 (486)
T 3mwu_A 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDR 410 (486)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCT
T ss_pred HHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhh
Confidence 44788999999999999999999777665432 2347789999999999999999999998776432
Q ss_pred hhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC------hHHHHHhcccCCChHHHHHH
Q psy8447 158 LISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE------PLLLEAFGQCLPSDAARQSF 222 (229)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 222 (229)
.. ..+. +.+..+|+.+|.|++|.|+.+||..++... ..+-++|........|..++
T Consensus 411 ~~-----~~~~----~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~ 472 (486)
T 3mwu_A 411 TI-----LLSR----ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDF 472 (486)
T ss_dssp TT-----TCCH----HHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCH
T ss_pred hc-----cchH----HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeH
Confidence 11 1122 247889999999999999999999988743 23556677766666555543
No 192
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.28 E-value=7.6e-12 Score=89.26 Aligned_cols=137 Identities=12% Similarity=0.135 Sum_probs=115.2
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCC--ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcH
Q psy8447 13 SFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGL--PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTE 90 (229)
Q Consensus 13 ~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~ 90 (229)
||++++..++..|..++.+++|. ++..++....+..+. +..++..++.. ..+.|+..+|..++.........
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~--i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~ 74 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGF--IDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDP 74 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTC--CCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCC
T ss_pred CCHHHHHHHHHHHHHhCCCCCCC--cCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCc
Confidence 68899999999999999877765 777788877777665 44555555544 44459999999999976554555
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 91 EILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 91 ~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
...+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+|.+++|.|+++||..++.
T Consensus 75 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 75 EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 55689999999999999999999999999888888899999999999999999999999999886
No 193
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=99.28 E-value=2e-11 Score=82.66 Aligned_cols=75 Identities=15% Similarity=0.262 Sum_probs=57.9
Q ss_pred HHHHHHHHHhc-CCCC-CcccHHHHHHHHHH-HhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChH
Q psy8447 128 ELIKFTFLIYD-LNND-GFITREEMFQLLRN-SLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~-G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
..++.+|..|| .||+ |+|+.+||..+++. ++.. .....+++ .++.+++.+|.|+||.|+|+||+.++.....
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~-l~~~~~~~----ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~~ 87 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSW-LGKRTDEA----AFQKLMSNLDSNRDNEVDFQEYCVFLSSIAM 87 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGG-SCSSCCHH----HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchh-ccCCCCHH----HHHHHHHHHcCCCCCCCcHHHHHHHHHHHHH
Confidence 57889999998 6775 89999999999986 4321 12222333 3788999999999999999999999886654
Q ss_pred HHH
Q psy8447 205 LLE 207 (229)
Q Consensus 205 ~~~ 207 (229)
.-+
T Consensus 88 ~~~ 90 (104)
T 3zwh_A 88 MSN 90 (104)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 194
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=99.27 E-value=5.8e-12 Score=82.22 Aligned_cols=71 Identities=27% Similarity=0.299 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHH
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLL 206 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~ 206 (229)
...++.+|..+|.+++|+|+.+|+..+++.++ .. +++ .+..++..+|.+++|.|+|+||..++...+.+.
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~-----~~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~ 79 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SV-----TPD----EVRRMMAEIDTDGDGFISFDEFTDFARANRGLV 79 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TC-----CHH----HHHHHHHHHCTTCSSEECHHHHHHHHHHCTTTH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CC-----CHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHHCccHH
Confidence 35678888888988889999999888887664 21 222 367788888888889999999988888777654
Q ss_pred H
Q psy8447 207 E 207 (229)
Q Consensus 207 ~ 207 (229)
+
T Consensus 80 ~ 80 (86)
T 2opo_A 80 K 80 (86)
T ss_dssp H
T ss_pred H
Confidence 4
No 195
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.26 E-value=2e-12 Score=100.03 Aligned_cols=118 Identities=13% Similarity=0.068 Sum_probs=85.0
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHh-hccCChH----HHHHHHHHHh-----cCCCCCcccHHHHHHHHHHHhhcCCC
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSC-FLRGTNE----ELIKFTFLIY-----DLNNDGFITREEMFQLLRNSLISHPQ 163 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~-~~~~~~~----~~~~~~F~~~-----D~~~~G~I~~~e~~~~l~~~~~~~~~ 163 (229)
+..+|..+|.+++|.|+++||..++.. +....+. ..+..+|..+ |.+++|.|+++||..++......
T Consensus 53 l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~--- 129 (226)
T 2lvv_A 53 RIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYI--- 129 (226)
T ss_dssp HHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHH---
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhc---
Confidence 678999999999999999999985544 3333333 3445555555 99999999999999964332110
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC-------hHHHHHhcccCCChHHHH
Q psy8447 164 DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE-------PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~-------~~~~~~~~~~~~~~~~~~ 220 (229)
...+.+..+|+.+|.+++|.|+.+||..++... ..+..+|........|..
T Consensus 130 ------~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~I 187 (226)
T 2lvv_A 130 ------YDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVV 187 (226)
T ss_dssp ------HHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCE
T ss_pred ------cCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcE
Confidence 112358889999999999999999999998642 235556666665555544
No 196
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=99.25 E-value=2.1e-11 Score=81.10 Aligned_cols=70 Identities=29% Similarity=0.471 Sum_probs=56.4
Q ss_pred cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 123 RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 123 ~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.....+.++.+|+.||.+++|+|+.+||..+++.++... +++ .++.+++.+|.+++|.|+|+||+.++..
T Consensus 24 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~-----~~~----e~~~l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKL-----TDE----EVDEMIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCC-----CHH----HHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence 345667889999999999999999999999998875322 222 3677899999999999999999988753
No 197
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.25 E-value=2.2e-11 Score=92.03 Aligned_cols=140 Identities=9% Similarity=0.072 Sum_probs=119.0
Q ss_pred ccCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC--CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcC
Q psy8447 9 LLPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG--LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFD 86 (229)
Q Consensus 9 ~~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~ 86 (229)
....++++++..++..|..++.+++|. ++..++..+.+.++ ++..++..++..+ .+.|+..+|..++.....
T Consensus 47 ~~~~ls~~~~~~l~~~F~~~D~d~~G~--i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~ 120 (196)
T 3dtp_E 47 VFAMFTQHQVQEFKEAFQLIDQDKDGF--ISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIA 120 (196)
T ss_dssp SSCSSCTTTHHHHHHHHHHHCCSCSSB--CCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCC
T ss_pred hhhhCCHHHHHHHHHHHHHHCCCCCCc--CCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhc
Confidence 346789999999999999999887765 77778887777765 4567788888776 445999999999987655
Q ss_pred CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 87 LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 87 ~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
.......+..+|+.+|.+++|.|+..||..++ .+....+.+.+..+|..+|.|++|.|+++||..+|.
T Consensus 121 ~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 188 (196)
T 3dtp_E 121 GTDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILT 188 (196)
T ss_dssp SSCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHH
Confidence 44555558999999999999999999999999 887778889999999999999999999999999885
No 198
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=99.24 E-value=4.2e-11 Score=76.02 Aligned_cols=67 Identities=22% Similarity=0.355 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHh-cCCCC-CcccHHHHHHHHHHHhhcC--CCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 126 NEELIKFTFLIY-DLNND-GFITREEMFQLLRNSLISH--PQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 126 ~~~~~~~~F~~~-D~~~~-G~I~~~e~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
+.+.++.+|+.| |.+++ |+|+..|+..++..++... +... +..++..+|.+++|.|+|+||..++..
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~---------~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMST---------LDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCS---------HHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHH---------HHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 346788999999 99999 9999999999999887554 3333 778999999999999999999998754
No 199
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=99.24 E-value=6.5e-12 Score=77.79 Aligned_cols=63 Identities=19% Similarity=0.294 Sum_probs=44.2
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 130 ~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
++.+|+.+|.+++|+|+.+|+..++..++... +++ .+..++..+|.+++|.|+++||..++..
T Consensus 3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-----~~~----~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYF-----TQE----DIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTS-----CHH----HHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC-----CHH----HHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 56778888888888888888888777654221 222 2666777788888888888888777654
No 200
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=99.23 E-value=4.1e-11 Score=79.52 Aligned_cols=71 Identities=15% Similarity=0.243 Sum_probs=54.9
Q ss_pred HHHHHHHHHhc-CCCC-CcccHHHHHHHHHH-HhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYD-LNND-GFITREEMFQLLRN-SLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~-G~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++.+|+.|| .||+ |+|+.+|++.+++. ++... ....+++ .++.+++.+|.|+||.|+|+||+.++....
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l-~~~~~~~----ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~ 83 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFL-GKRTDEA----AFQKLMSNLDSNRDNEVDFQEYCVFLSCIA 83 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC----CCHH----HHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhc-cCCCCHH----HHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 57889999998 6774 89999999999986 43211 1222333 378899999999999999999999887644
No 201
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=99.22 E-value=7.8e-11 Score=79.20 Aligned_cols=71 Identities=20% Similarity=0.345 Sum_probs=57.0
Q ss_pred HHHHHHHHHhcCCC---CCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYDLNN---DGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D~~~---~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
..++.+|+.||.++ +|+|+.+||..+++..+....... ..++.++.+++.+|.|+||.|+|+||+.++...
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~----~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDT----GNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSS----HHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHcccccccc----ccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 56889999999964 799999999999987654322222 223458899999999999999999999988743
No 202
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=99.22 E-value=2.7e-11 Score=81.14 Aligned_cols=72 Identities=21% Similarity=0.306 Sum_probs=55.5
Q ss_pred HHHHHHHHHhc-CCCCC-cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYD-LNNDG-FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++.+|+.|| .||+| +|+.+|+..+++..+........+++ .++.+++.+|.|+||.|+|+||+.++....
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~----ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~ 84 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEE----GLKKLMGSLDENSDQQVDFQEYAVFLALIT 84 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHH----HHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHH----HHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 57889999998 78885 99999999999862221111122333 378899999999999999999999887644
No 203
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.21 E-value=1.4e-10 Score=83.91 Aligned_cols=142 Identities=11% Similarity=0.129 Sum_probs=114.9
Q ss_pred hccCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC--CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhc
Q psy8447 8 QLLPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG--LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTF 85 (229)
Q Consensus 8 ~~~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~ 85 (229)
.....++++++..++..|..++.+++|. +...++..+.+..+ ++..++..++.. ..+.|+..+|..++....
T Consensus 7 ~~~~~l~~~~~~~l~~~F~~~D~d~~G~--i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~ 80 (156)
T 1wdc_B 7 GVLTKLPQKQIQEMKEAFSMIDVDRDGF--VSKEDIKAISEQLGRAPDDKELTAMLKE----APGPLNFTMFLSIFSDKL 80 (156)
T ss_dssp -----CCHHHHHHHHHHHHHHCTTCSSS--CCHHHHHHHHHHHSSCCCHHHHHHHHTT----SSSCCCHHHHHHHHHHHT
T ss_pred chhccCCHHHHHHHHHHHHHHCCCCCCc--CcHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCcCcHHHHHHHHHHHh
Confidence 3457789999999999999999877765 77777777776665 456777777652 234599999999998765
Q ss_pred CCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 86 DLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 86 ~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
........+..+|+.+|.+++|.|+..||..++..+....+.+.+..+|..+|.+ +|.|+++||..++..
T Consensus 81 ~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_B 81 SGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKG 150 (156)
T ss_dssp CSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred cCCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhc
Confidence 4444555589999999999999999999999999887778889999999999999 999999999998863
No 204
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=99.21 E-value=3.4e-11 Score=74.31 Aligned_cols=64 Identities=22% Similarity=0.336 Sum_probs=54.2
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 130 ~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
++.+|+.+|.+++|+|+.+|+..++..++.. ...+.+..++..+|.+++|.|+++||..++...
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~---------~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~ 65 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAI---------KNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCC---------CcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence 3578999999999999999999999887532 223358889999999999999999999988754
No 205
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=99.20 E-value=5.9e-11 Score=81.45 Aligned_cols=73 Identities=18% Similarity=0.298 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhc-CCCCC-cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 127 EELIKFTFLIYD-LNNDG-FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 127 ~~~~~~~F~~~D-~~~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
.+.++.+|+.|| .|++| +|+.+||..+++..+........+++ .++.+++.+|.|+||.|+|+||+.++....
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~----ev~~li~~~D~dgdG~Idf~EF~~~m~~~~ 95 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEA----AFQKLMSNLDSNRDNEVDFQEYCVFLSCIA 95 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTT----HHHHHHHHHCSSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHH----HHHHHHHHhCCCCCCcEeHHHHHHHHHHHH
Confidence 357889999999 89997 99999999999863221111122222 277899999999999999999999887544
No 206
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.19 E-value=4.4e-12 Score=86.44 Aligned_cols=100 Identities=21% Similarity=0.227 Sum_probs=82.4
Q ss_pred CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh---ccCChH
Q psy8447 51 GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF---LRGTNE 127 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~---~~~~~~ 127 (229)
.+++.++..++..++ ..+.|+..+|..++... ......+..+|+.+|.+++|.|+.+||..++..+ ....+.
T Consensus 5 ~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~---~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~ 79 (108)
T 2kyc_A 5 ILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS---KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTA 79 (108)
T ss_dssp SSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT---TCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCCT
T ss_pred cCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC---cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCCH
Confidence 367788999988887 34449999999988532 2222336889999999999999999999999988 455677
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+.+..+|..+|.+++|.|+++||..+++
T Consensus 80 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 80 SETKTFLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp TTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence 7899999999999999999999998874
No 207
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=99.18 E-value=2.2e-11 Score=77.65 Aligned_cols=64 Identities=25% Similarity=0.337 Sum_probs=44.9
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
+.++.+|..||.+++|+|+.+|+..+++.++... + ...+..++..+|.+++|.|+|+||+.++.
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-----~----~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 70 (77)
T 2joj_A 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDV-----K----KPEILELMNEYDREGNGYIGFDDFLDIMT 70 (77)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCC-----H----HHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCC-----C----HHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 4567778888888888888888887777664321 1 22366677777877888888888877665
No 208
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=99.18 E-value=8.5e-11 Score=72.63 Aligned_cols=63 Identities=25% Similarity=0.319 Sum_probs=58.6
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+|.+++|.|+++||..++..
T Consensus 3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 578999999999999999999999999887788889999999999999999999999998864
No 209
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=99.18 E-value=3.4e-11 Score=81.61 Aligned_cols=85 Identities=18% Similarity=0.240 Sum_probs=64.7
Q ss_pred ceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCC
Q psy8447 108 VIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKD 187 (229)
Q Consensus 108 ~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~d 187 (229)
.+++.++...+..... .....++.+|+.||.+++|+|+..||..++..++... +++ .++.++..+|.+++
T Consensus 5 ~~~~~~~~~~l~~~~~-~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-----~~~----e~~~l~~~~d~~~~ 74 (105)
T 1wlz_A 5 ATADRDILARLHKAVT-SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQIL-----TDE----QFDRLWNEMPVNAK 74 (105)
T ss_dssp TTCCHHHHHHHHHHHH-HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCC-----CHH----HHHHHHTTSCBCTT
T ss_pred chhHHHHHHHHHHHHH-chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC-----CHH----HHHHHHHHcCCCCC
Confidence 3556666666665442 2346788999999999999999999999998875432 232 36779999999999
Q ss_pred CcccHHHHHHHHhcC
Q psy8447 188 GKISFQDFQQSVTDE 202 (229)
Q Consensus 188 g~Is~~ef~~~~~~~ 202 (229)
|.|+|+||+.++...
T Consensus 75 g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 75 GRLKYPDFLSRFSSE 89 (105)
T ss_dssp SCBCHHHHHHHHC--
T ss_pred CCCcHHHHHHHHhcc
Confidence 999999999988754
No 210
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.17 E-value=2.2e-10 Score=81.94 Aligned_cols=133 Identities=10% Similarity=0.033 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHhhcC-CCCCCCCCCchhhhHhhcC--CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHH
Q psy8447 15 RQEVETLCKIFKKLLNSS-SNAGVPISTSTPVVVQVSG--LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEE 91 (229)
Q Consensus 15 ~~~i~~l~~~f~~l~~~~-~~~~~~~~~~~~~~~~~~~--l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~ 91 (229)
-+++..++..|..++.++ +|. +...++....+..+ ++..++..++..++.. |+..+|..++..........
T Consensus 10 ~~~~~~l~~~F~~~D~d~~~G~--i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~ 83 (146)
T 2qac_A 10 LEEKVDESDVRIYFNEKSSGGK--ISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNV 83 (146)
T ss_dssp HHHHSCHHHHHHHHHHHCBTTB--EEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCH
T ss_pred HHHHHHHHHHHHHhCccCCCCc--ccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchH
Confidence 456777899999999888 765 77777777766665 4567788888777654 99999999998754434445
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
..+..+|+.+|.+++|.|+.+||..++..+....+.+.+..+|..+ |++|.|+++||..++.
T Consensus 84 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 84 EELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp HHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 5588999999999999999999999999887778889999999999 9999999999998873
No 211
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=99.17 E-value=5.4e-11 Score=76.96 Aligned_cols=69 Identities=22% Similarity=0.323 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh--hcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy8447 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSL--ISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSV 199 (229)
Q Consensus 126 ~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~ 199 (229)
..+.++.+|..||.+++|+|+.+|+..++..++ ... +++.+...+..++..+|.+++|.|+|+||...+
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~ 75 (83)
T 1yx7_A 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKAL-----SKDKVKEASAKLIKMADKNSDGKISKEEFLNAN 75 (83)
T ss_dssp SCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTT-----TTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCC-----CHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhh
Confidence 346789999999999999999999999999876 332 233344445669999999999999999999654
No 212
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=99.17 E-value=8.6e-12 Score=78.21 Aligned_cols=68 Identities=24% Similarity=0.479 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 125 TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 125 ~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.+.+.++.+|..+|.+++|+|+.+||..++..++.. .+++ .+..++..+|.+++|.|+|+||..++..
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-----~~~~----~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQP-----LPQE----ELDAMIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCS-----SCHH----HHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC-----CCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence 345678899999999999999999999988766432 2222 3777999999999999999999988753
No 213
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=99.17 E-value=4.9e-11 Score=80.27 Aligned_cols=61 Identities=26% Similarity=0.337 Sum_probs=53.8
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLL 154 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l 154 (229)
++.+|+.+|.|++|.|+..||..++..+....+++.++.+|+.+|.|++|.|+++||..+|
T Consensus 38 l~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp HHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 5778999999999999999999999988877778888999999999999999999998765
No 214
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=99.16 E-value=4.7e-12 Score=86.85 Aligned_cols=95 Identities=14% Similarity=0.174 Sum_probs=80.5
Q ss_pred CCCCCchhhhHhhcCCChhHHHHHHhccC-----ccCCCC-CCHHHHHHHHhhhcCCC-cHHHHHHHHHHHHccCC----
Q psy8447 37 VPISTSTPVVVQVSGLPPSNVTERYKGFS-----PFSFQG-LDRVVFRELLHNTFDLV-TEEILMERIFCAFDRLC---- 105 (229)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~~~~~~l~~~f~-----~~d~~~-i~~~ef~~~l~~~~~~~-~~~~~~~~lf~~~d~~~---- 105 (229)
+..+.++.++.+.+.++..+++.|++.|. ..++++ |+.++|..++....+.. .+..++..+|+.||.++
T Consensus 7 ~lspe~l~~L~~~t~fs~~elk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~~~~~ 86 (118)
T 1tuz_A 7 LISPSDFAQLQKYMEYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNE 86 (118)
T ss_dssp CSCHHHHHHHHHHHHHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTC
T ss_pred cCCHHHHHHHHHHcccCHHHHHHHHHHHccccccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhccccccc
Confidence 35566677777888888899999999993 456666 99999999999998876 88888999999999975
Q ss_pred ----CCceeHHHHHHHHHhhccCChHHHHH
Q psy8447 106 ----DGVIHLDEWVLGLSCFLRGTNEELIK 131 (229)
Q Consensus 106 ----~g~I~~~ef~~~~~~~~~~~~~~~~~ 131 (229)
+|.|+|.||+++++.+.++.++++++
T Consensus 87 ~~~~~g~I~fkefi~~LSll~rG~~edKLe 116 (118)
T 1tuz_A 87 TNVTKDVVCLNDVSCYFSLLEGGRPEDKLE 116 (118)
T ss_dssp CCCCSCCEEHHHHHHHHHHHHSCCCSCCCC
T ss_pred ccCCCCeEeHHHHHHHHHHhcCCCHHHhhc
Confidence 89999999999999998888776553
No 215
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=99.16 E-value=5.2e-13 Score=93.55 Aligned_cols=100 Identities=17% Similarity=0.085 Sum_probs=49.5
Q ss_pred hhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHH-----HHHhhc-cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 83 NTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVL-----GLSCFL-RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 83 ~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~-----~~~~~~-~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
.++..++..+ +..++... +|.|+|+||+. ++.... .....+.++.+|+.|| |+|+.+|+..+++.
T Consensus 4 ~lG~~~t~~e-i~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~ 74 (123)
T 2kld_A 4 AIGINDTYSE-VKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKG 74 (123)
T ss_dssp ----------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTT
T ss_pred hcCCCCCHHH-HHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHH
Confidence 3344344444 56666654 78999999998 554432 2233356788999998 99999999999976
Q ss_pred HhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 157 SLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
++. +++ .++.+++.+|.+++|.|+|+||..++...
T Consensus 75 lG~-------t~~----ei~~~~~~~D~d~dG~I~~~EF~~~~~~~ 109 (123)
T 2kld_A 75 KGH-------TDA----EIEAIFTKYDQDGDQELTEHEHQQMRDDL 109 (123)
T ss_dssp CCS-------SHH----HHHHHHHHHSSSSCCEECSHHHHHCSCTT
T ss_pred hCC-------CHH----HHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 542 333 37789999999999999999999987544
No 216
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.16 E-value=5.4e-11 Score=91.45 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=83.0
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHh-hccCCh----HHHHHHHHHHh-----cCCCCCcccHHHHHHHHHHHhhcCCC
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSC-FLRGTN----EELIKFTFLIY-----DLNNDGFITREEMFQLLRNSLISHPQ 163 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~-~~~~~~----~~~~~~~F~~~-----D~~~~G~I~~~e~~~~l~~~~~~~~~ 163 (229)
+..+|..+|.+++|.|++.||..++.. +....+ ...+..+|..+ |.+++|.|++.||..++..+...
T Consensus 50 l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~EF~~~~~~~~~~--- 126 (219)
T 3cs1_A 50 RIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYI--- 126 (219)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSBCHHHHHHHHHHH---
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHHHHHHHHHHHhcc---
Confidence 678999999999999999999998876 332222 22334444432 34899999999999987544211
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC-------hHHHHHhcccCCChHHHH
Q psy8447 164 DEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE-------PLLLEAFGQCLPSDAARQ 220 (229)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~-------~~~~~~~~~~~~~~~~~~ 220 (229)
...+.+..+|+.+|.+++|.|+.+||..++... ..+-.+|........|..
T Consensus 127 ------~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I 184 (219)
T 3cs1_A 127 ------YDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSV 184 (219)
T ss_dssp ------HHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEE
T ss_pred ------chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcE
Confidence 123358889999999999999999999988532 234555665555544443
No 217
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.16 E-value=5.2e-11 Score=86.52 Aligned_cols=138 Identities=15% Similarity=0.077 Sum_probs=115.9
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCCh--hHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCC
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPP--SNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLV 88 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~ 88 (229)
..+|++++..+++.|..++.+++|. +...++..+.+.++..+ .++..+... ..+.|+..+|..++.......
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~--I~~~El~~~l~~lg~~~~~~~~~~~~~~----~~~~i~f~ef~~~~~~~~~~~ 81 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGF--IGMEDLKDMFSSLGRVPPDDELNAMLKE----CPGQLNFTAFLTLFGEKVSGT 81 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSC--CCHHHHHHHHHHTTSCCCHHHHHHHHHT----SSSCCCSHHHHHTTTTTTTTC
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCe--EcHHHHHHHHHHcCCCccHHHHHHHHHh----ccCCccHHHHHHHHHhhhccc
Confidence 5799999999999999999888776 88888888888877654 555555432 223499999999888765555
Q ss_pred cHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 89 ~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
...+.+..+|+.||.+++|.|+..|+..++..+....+++.+..+++.+|.+ +|.|+++||.+++.
T Consensus 82 ~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~ 147 (153)
T 3i5g_B 82 DPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKG 147 (153)
T ss_dssp CCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHH
T ss_pred ccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhc
Confidence 5555689999999999999999999999999988888999999999999988 99999999999885
No 218
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=99.15 E-value=5.5e-11 Score=78.27 Aligned_cols=65 Identities=22% Similarity=0.334 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
...++.+|..||.+++|+|+.+|+..+++.++... +++ .+..++..+|.+++|.|+|+||+.++.
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-----~~~----~~~~l~~~~D~~~dg~i~~~eF~~~~~ 83 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNP-----TKE----ELDAIIEEVDEDGSGTIDFEEFLVMMV 83 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC-----CHH----HHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence 34567778888888888888888877777654321 222 256677777777788888888877664
No 219
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=99.15 E-value=6e-11 Score=78.34 Aligned_cols=64 Identities=27% Similarity=0.511 Sum_probs=34.8
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
+.++.+|+.||.+++|+|+.+||..++..++... +++ .+..++..+|.+++|.|+|+||+.++.
T Consensus 9 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-----~~~----~~~~l~~~~d~~~dg~i~~~eF~~~~~ 72 (92)
T 2kn2_A 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKL-----TDE----EVEQMIKEADLDGDGQVNYEEFVKMMM 72 (92)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC-----CHH----HHHHHHHHHCSSCCSSEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence 3455666666666666666666666665543211 111 244555666666666666666665543
No 220
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=99.15 E-value=2.4e-10 Score=75.98 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=60.5
Q ss_pred cHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 89 ~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
...+.+..+|..+|.+++|.|+.+||..++..+....+.+.+..+|+.+|.+++|.|+++||..++.
T Consensus 26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 3444478999999999999999999999999988778889999999999999999999999998874
No 221
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=99.15 E-value=4e-11 Score=77.92 Aligned_cols=64 Identities=22% Similarity=0.316 Sum_probs=40.8
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..++.+|..||.+++|+|+.+|+..+++.++... ++. .+..++..+|.+++|.|+|+||+.++.
T Consensus 14 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~-----~~~----~~~~~~~~~d~~~~g~i~~~eF~~~~~ 77 (85)
T 2ktg_A 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANP-----TKQ----KISEIVKDYDKDNSGKFDQETFLTIML 77 (85)
T ss_dssp HHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCC-----CHH----HHHHHHHHHSSSSCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 3566777777777777777777777776553211 222 255667777777777777777776654
No 222
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=99.14 E-value=1.7e-10 Score=77.49 Aligned_cols=71 Identities=23% Similarity=0.353 Sum_probs=55.9
Q ss_pred HHHHHHHHHhc-CCCCC-cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYD-LNNDG-FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
+.++.+|+.|| .+++| +|+.+||..+++..+........+++ .+..+++.+|.|+||.|+|+||+.++...
T Consensus 10 ~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~----~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 10 DALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPM----LVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHH----HHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHH----HHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 57889999997 89988 99999999999864322112222333 37889999999999999999999988754
No 223
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=99.14 E-value=4.8e-11 Score=73.61 Aligned_cols=61 Identities=25% Similarity=0.293 Sum_probs=56.2
Q ss_pred HHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 95 ERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 95 ~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+.+|+.+|.+++|.|+++||..++..+....+.+.+..+|..+|.+++|.|+++||..++.
T Consensus 3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 5689999999999999999999999887667778899999999999999999999999875
No 224
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=99.14 E-value=1.6e-10 Score=78.19 Aligned_cols=75 Identities=19% Similarity=0.366 Sum_probs=56.0
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHH----HhhcCCCCC---CChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 129 LIKFTFLIYDLNNDGFITREEMFQLLRN----SLISHPQDE---DPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 129 ~~~~~F~~~D~~~~G~I~~~e~~~~l~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.++.+|..||.|++|+|+.+|+..++.. +....+... ...+.....+..++..+|.|+||.|+++||+.++..
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 100 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR 100 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHhc
Confidence 4788999999999999999999999986 222111110 011223446888999999999999999999998876
Q ss_pred Ch
Q psy8447 202 EP 203 (229)
Q Consensus 202 ~~ 203 (229)
.+
T Consensus 101 ~~ 102 (103)
T 1snl_A 101 KE 102 (103)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 225
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=99.14 E-value=1.2e-11 Score=79.83 Aligned_cols=70 Identities=26% Similarity=0.446 Sum_probs=50.4
Q ss_pred ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 125 TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 125 ~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
...+.++ +|..||.+++|+|+.+||..++..++. ...+++ .+..++..+|.+++|.|+|+||..++...+
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~----~~~~~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 75 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGE----EPLTDA----EVEEAMKEADEDGNGVIDIPEFMDLIKKSK 75 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTT----CCCCHH----HHHHHHHHHCSSGGGSEEHHHHHHHHHCC-
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCC----CCCCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHhhh
Confidence 4456778 888888888888888888888766530 112222 367788888888888888888888877654
No 226
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=99.13 E-value=1.8e-10 Score=76.79 Aligned_cols=71 Identities=21% Similarity=0.308 Sum_probs=53.7
Q ss_pred HHHHHHHHHhc-CCC-CCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYD-LNN-DGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~-~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
+.++.+|+.|| .|+ +|+|+.+|+..+++...........+++ .+..+++.+|.|+||.|+|+||+.++...
T Consensus 9 ~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~----~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKD----AVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------C----HHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHH----HHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 57889999999 788 5899999999999864321111122222 37889999999999999999999988754
No 227
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=99.12 E-value=3.2e-10 Score=75.04 Aligned_cols=70 Identities=23% Similarity=0.384 Sum_probs=54.7
Q ss_pred HHHHHHHHHhcCCCCC---cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYDLNNDG---FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G---~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
..++.+|+.|| +++| +|+.+|+..+++...........+++ .++.+++.+|.|+||.|+|+||+.++...
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~----~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQE----VVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHH----HHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHH----HHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 46889999999 7666 99999999999883322222233333 47889999999999999999999988753
No 228
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=99.12 E-value=3.1e-11 Score=83.78 Aligned_cols=80 Identities=21% Similarity=0.400 Sum_probs=58.6
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHH-H
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLL-L 206 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~-~ 206 (229)
+.+..+|+.||.+ +|+|+.+|++.+|+..+........+++ .++.+++.+|.|+||.|+|+||+.+|...... .
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~----~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~h 89 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPL----AVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACN 89 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTT----HHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHH----HHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHH
Confidence 5688999999988 8999999999999763211112222332 37889999999999999999999998765432 2
Q ss_pred HHhccc
Q psy8447 207 EAFGQC 212 (229)
Q Consensus 207 ~~~~~~ 212 (229)
+.|...
T Consensus 90 e~f~~~ 95 (121)
T 4drw_A 90 DYFVVH 95 (121)
T ss_dssp HHHTTS
T ss_pred HHHHHH
Confidence 344443
No 229
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=99.12 E-value=1.9e-10 Score=78.07 Aligned_cols=67 Identities=13% Similarity=0.297 Sum_probs=52.9
Q ss_pred HHHHHHHHHhc-CCCC-CcccHHHHHHHHHHHhh-cCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYD-LNND-GFITREEMFQLLRNSLI-SHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~-G~I~~~e~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
+.++.+|+.|| .|++ |+|+.+||..+++..++ ..+... .+..+++.+|.|+||.|+|+||+.++...
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~--------ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVG--------SLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCC--------CHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHH--------HHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 46889999999 7886 79999999999986332 222111 27789999999999999999999988643
No 230
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=99.11 E-value=8.8e-11 Score=81.47 Aligned_cols=64 Identities=14% Similarity=0.184 Sum_probs=36.2
Q ss_pred HHHHHhccCccCCC--CCCHHHHHHHHhh-----hcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh
Q psy8447 57 VTERYKGFSPFSFQ--GLDRVVFRELLHN-----TFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 121 (229)
Q Consensus 57 ~~~l~~~f~~~d~~--~i~~~ef~~~l~~-----~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~ 121 (229)
+..++..|..++.+ .|+..||+.++.. ++...+... +..+++.+|.|++|.|+|+||+.++..+
T Consensus 14 ie~l~~~F~~yd~ddG~Is~~EL~~~l~~~~~~~l~~~~~~~~-v~~~i~~~D~d~DG~IdF~EF~~lm~~l 84 (121)
T 4drw_A 14 METMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLA-VDKIMKDLDQCRDGKVGFQSFFSLIAGL 84 (121)
T ss_dssp HHHHHHTTGGGSCTTCSCCHHHHHHHTTTSCHHHHTTSSCTTH-HHHHHHHHCTTCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEcHHHHHHHHHHHhhhhcccCCCHHH-HHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 44455555544432 2666666666654 233233333 5666666666666666666666666654
No 231
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=99.11 E-value=1.4e-09 Score=71.57 Aligned_cols=68 Identities=21% Similarity=0.236 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 91 EILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 91 ~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
...+..+|..+|.+++|.|+..||..++..+....+.+.+..+|..+|.+++|.|+++||..++....
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~ 75 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVR 75 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence 34478899999999999999999999999988778889999999999999999999999999987653
No 232
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=99.11 E-value=5.4e-10 Score=70.99 Aligned_cols=65 Identities=17% Similarity=0.274 Sum_probs=60.2
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
.+..+|..+|.+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++...
T Consensus 8 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 72 (77)
T 2joj_A 8 EIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEK 72 (77)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHH
T ss_pred HHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 36889999999999999999999999998878888999999999999999999999999988754
No 233
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.11 E-value=3.6e-10 Score=102.09 Aligned_cols=140 Identities=9% Similarity=0.058 Sum_probs=103.0
Q ss_pred hHHHHHHhc--cCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccC-------CCCceeHHHHHHHHHhhccCC
Q psy8447 55 SNVTERYKG--FSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRL-------CDGVIHLDEWVLGLSCFLRGT 125 (229)
Q Consensus 55 ~~~~~l~~~--f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~-------~~g~I~~~ef~~~~~~~~~~~ 125 (229)
..+.+.+.. |+....+.|+..++..++.. . ...+..++..+|.+ ++|.|+|+||+.++..+..
T Consensus 150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~-~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~-- 221 (885)
T 3ohm_B 150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----D-KKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL-- 221 (885)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----G-HHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC--
T ss_pred HHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----C-HHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC--
Confidence 334444443 55444445999888888774 2 33477888888876 7789999999999998754
Q ss_pred hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcC-CCCCCChHHHHHHHHHHHHHcCCC----CCCcccHHHHHHHHh
Q psy8447 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISH-PQDEDPDEGVRDLVELALRKMDYD----KDGKISFQDFQQSVT 200 (229)
Q Consensus 126 ~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~----~dg~Is~~ef~~~~~ 200 (229)
..+++.+|+.||.+++|+|+.+||..+|+...... ..+...+..-.+.+..+++.++.+ ++|.|++++|..+|.
T Consensus 222 -R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~ 300 (885)
T 3ohm_B 222 -RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLG 300 (885)
T ss_dssp -CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHT
T ss_pred -HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhcc
Confidence 35799999999999999999999999999875321 111111111123478899999988 789999999999998
Q ss_pred cCh
Q psy8447 201 DEP 203 (229)
Q Consensus 201 ~~~ 203 (229)
...
T Consensus 301 S~~ 303 (885)
T 3ohm_B 301 GEE 303 (885)
T ss_dssp STT
T ss_pred Ccc
Confidence 643
No 234
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=99.10 E-value=1.6e-10 Score=73.71 Aligned_cols=67 Identities=24% Similarity=0.357 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHhcC-CCCC-cccHHHHHHHHHH-HhhcC-CCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 126 NEELIKFTFLIYDL-NNDG-FITREEMFQLLRN-SLISH-PQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 126 ~~~~~~~~F~~~D~-~~~G-~I~~~e~~~~l~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
....++.+|..||. +++| .|+.+|+..+++. ++... +... ++.++..+|.+++|.|+|+||..++..
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~---------~~~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRT---------LDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCC---------SSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHH---------HHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 35678999999999 9999 9999999999986 44333 2222 567899999999999999999997753
No 235
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.10 E-value=1.3e-10 Score=76.90 Aligned_cols=65 Identities=18% Similarity=0.278 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
...++.+|+.||.|++|+|+.+|+..+++.++. +.+ .+..++..+|.+++|.|+|+||+.++...
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~-------~~~----~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL-------PIL----ELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS-------CHH----HHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-------CHH----HHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 356889999999999999999999999987631 222 37789999999999999999999988644
No 236
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=99.10 E-value=1.9e-10 Score=76.25 Aligned_cols=66 Identities=21% Similarity=0.320 Sum_probs=53.2
Q ss_pred HHHHHHHHHhcC-CCCC-cccHHHHHHHH-HHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYDL-NNDG-FITREEMFQLL-RNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D~-~~~G-~I~~~e~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
..++.+|..||. +++| +|+.+|+..++ +.++...... .+..+++.+|.|++|.|+|+||+.++...
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~---------~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKK---------GADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTT---------CHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHH---------HHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 468899999999 9999 99999999999 5554322211 25779999999999999999999988654
No 237
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=99.10 E-value=3e-10 Score=75.18 Aligned_cols=67 Identities=18% Similarity=0.347 Sum_probs=53.3
Q ss_pred HHHHHHHHHhc-CCCCC-cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 128 ELIKFTFLIYD-LNNDG-FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
..++.+|+.|| .+++| +|+.+|+..+++..+. . .. .++. .++.+++.+|.|++|.|+|+||+.++..
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~-~-~~-~~~~----~i~~~~~~~D~d~dG~I~f~EF~~~~~~ 78 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELC-L-GE-MKES----SIDDLMKSLDKNSDQEIDFKEYSVFLTM 78 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSC-C-TT-TCCT----THHHHHHHHTTTCSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcC-C-CC-CCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 56889999999 99999 9999999999986432 1 01 1222 2677999999999999999999998864
No 238
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=99.09 E-value=9.6e-11 Score=84.11 Aligned_cols=84 Identities=19% Similarity=0.142 Sum_probs=50.5
Q ss_pred CCCHHHHHHHHhhhcC----CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc--------CChHHHH----HHHH
Q psy8447 71 GLDRVVFRELLHNTFD----LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR--------GTNEELI----KFTF 134 (229)
Q Consensus 71 ~i~~~ef~~~l~~~~~----~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~--------~~~~~~~----~~~F 134 (229)
.|+..+|..++..... .....+.+..+|+.+|.|++|.|+++||..++..+.. ..+.+.+ ..+|
T Consensus 43 ~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f 122 (143)
T 3a4u_B 43 VHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVL 122 (143)
T ss_dssp --------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHH
Confidence 3999999988876532 2244555788999999999999999999998877632 2334444 6677
Q ss_pred HHhcCCCCCcccHHHHHHHH
Q psy8447 135 LIYDLNNDGFITREEMFQLL 154 (229)
Q Consensus 135 ~~~D~~~~G~I~~~e~~~~l 154 (229)
+.+|.|++|.|+++||..++
T Consensus 123 ~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 123 RDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp HHHCTTCSSEECHHHHHC--
T ss_pred HHcCCCCCCcEeHHHHHHHH
Confidence 99999999999999998765
No 239
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=99.09 E-value=1.2e-10 Score=76.83 Aligned_cols=63 Identities=27% Similarity=0.412 Sum_probs=48.0
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
+.++.+|+.||.|++|+|+.+||..+++.++ .++. .++.++..+|.+++|.|+|+||+.++..
T Consensus 27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g-------~~~~----~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 27 ARLRSVFAACDANRSGRLEREEFRALCTELR-------VRPA----DAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT-------CCHH----HHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC-------cCHH----HHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 5677888888888888888888888887764 1222 3677888888888888888888887653
No 240
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=99.09 E-value=1e-10 Score=77.93 Aligned_cols=71 Identities=21% Similarity=0.306 Sum_probs=54.5
Q ss_pred HHHHHHHHHhc-CCCCC-cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYD-LNNDG-FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~G-~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
+.++.+|+.|| .+++| +|+.+|+..+++...........+++ .++.+++.+|.|+||.|+|+||+.++...
T Consensus 12 ~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~----~v~~~~~~~D~d~dG~I~f~EF~~~~~~~ 84 (95)
T 2wcb_A 12 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKA----VIDEIFQGLDANQDEQVDFQEFISLVAIA 84 (95)
T ss_dssp HHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHH----HHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHH----HHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 57889999999 89998 99999999999863210000111222 37889999999999999999999988753
No 241
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=99.09 E-value=2.9e-10 Score=82.21 Aligned_cols=82 Identities=10% Similarity=0.024 Sum_probs=60.5
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|+..||..++..+....+.+.+..+|..+|.+++|.|+++||..++... ..
T Consensus 52 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~--------- 117 (150)
T 2jjz_A 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RS--------- 117 (150)
T ss_dssp HHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SC---------
T ss_pred HHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HH---------
Confidence 6778888899999999999999888887766777888889999999999999999998887642 11
Q ss_pred HHHHHHHHcCCCCCCc
Q psy8447 174 LVELALRKMDYDKDGK 189 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~ 189 (229)
.+..+|+.+|.+++|.
T Consensus 118 ~i~~aF~~~D~d~~G~ 133 (150)
T 2jjz_A 118 AVLKLVMMFEGKANES 133 (150)
T ss_dssp CHHHHHHC--------
T ss_pred HHHHHHHHHcCCCCCC
Confidence 1677888999888886
No 242
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.07 E-value=1.4e-10 Score=79.39 Aligned_cols=67 Identities=16% Similarity=0.170 Sum_probs=54.0
Q ss_pred ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 125 TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 125 ~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
....+++.+|+.||.|++|+|+.+|+..+++.++ .+..+ +..+++.+|.+++|.|+|+||+.+|...
T Consensus 19 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--l~~~e---------l~~i~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 19 EQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPE---------LSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp SSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCC---------HHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CCHHH---------HHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 3456788999999999999999999999886542 22221 6778999999999999999999988654
No 243
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=99.07 E-value=1.3e-10 Score=77.51 Aligned_cols=64 Identities=22% Similarity=0.244 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.+.++.+|+.||.|++|+|+.+|+..+++.++ .+++ .+..++..+|.+++|.|+|+||..++..
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g-------~~~~----~~~~i~~~~D~d~dG~i~~~EF~~~~~~ 72 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG-------LPST----LLAHIWSLCDTKDCGKLSKDQFALAFHL 72 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT-------CCHH----HHHHHHHHHCTTCSSSEETTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC-------CCHH----HHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 46788999999999999999999999997653 1222 3778999999999999999999998754
No 244
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=99.07 E-value=1.3e-10 Score=83.81 Aligned_cols=83 Identities=16% Similarity=0.269 Sum_probs=53.7
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC-hHHH
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE-PLLL 206 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~-~~~~ 206 (229)
+.++.+|..||.+++|+|+.+|+..++..++.. .++. .+..++..+|.+++|.|+|+||+.++... +.+.
T Consensus 48 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~-----~~~~----~~~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~~~ 118 (147)
T 1wy9_A 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVP-----KTHL----ELKRLIREVSSGSEETFSYSDFLRMMLGKRSAIL 118 (147)
T ss_dssp HHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCC-----CCHH----HHHHHHHHHCSSCTTEECHHHHHHHHCSSGGGGG
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCC-----CCHH----HHHHHHHHhCCCCCCcEeHHHHHHHHHHhHHHHH
Confidence 567777888888888888888888777765432 1222 25667777777778888888888777653 4566
Q ss_pred HHhcccCCChHHH
Q psy8447 207 EAFGQCLPSDAAR 219 (229)
Q Consensus 207 ~~~~~~~~~~~~~ 219 (229)
.+|..+...+.|.
T Consensus 119 ~aF~~~D~d~~g~ 131 (147)
T 1wy9_A 119 RMILMYEEKNKEH 131 (147)
T ss_dssp GGGGGCCCC----
T ss_pred HHHHHHccCCCCC
Confidence 6676666554444
No 245
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=99.07 E-value=6.9e-10 Score=70.76 Aligned_cols=63 Identities=32% Similarity=0.425 Sum_probs=58.6
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|..+|.+++|.|+..||..++..+. ..+.+.+..+|..+|.+++|.|+++||..++...
T Consensus 5 l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~ 67 (78)
T 1k9u_A 5 MERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67 (78)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence 67899999999999999999999999988 7788899999999999999999999999998753
No 246
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=99.07 E-value=1.1e-10 Score=78.47 Aligned_cols=64 Identities=19% Similarity=0.183 Sum_probs=54.4
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.+.++.+|+.||.|++|+|+.+|+..+++.++ .+++ .+..+++.+|.++||.|+|+||..+|..
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~~-------l~~~----~l~~i~~~~D~d~dG~i~~~EF~~~~~~ 73 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKSG-------LPDL----ILGKIWDLADTDGKGVLSKQEFFVALRL 73 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTSS-------SCHH----HHHHHHHHHCCSSSSSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcC-------CCHH----HHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 35788999999999999999999999997642 1222 3788999999999999999999998863
No 247
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=99.06 E-value=4e-10 Score=75.78 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=56.9
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHH-----hh--cCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNS-----LI--SHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
+.++.+|+.||.+ +|+|+.+|+..+++.. +. ..... .++.+++.+|.|+||.|+|+||+.++.
T Consensus 10 ~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~---------ev~~l~~~~D~d~dG~I~f~EF~~~~~ 79 (100)
T 1psr_A 10 IGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTN---------YLADVFEKKDKNEDKKIDFSEFLSLLG 79 (100)
T ss_dssp HHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCC---------GGGTHHHHHCTTCSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHH---------HHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 5788999999976 7999999999999873 22 22222 267799999999999999999999987
Q ss_pred cCh-HHHHHhcc
Q psy8447 201 DEP-LLLEAFGQ 211 (229)
Q Consensus 201 ~~~-~~~~~~~~ 211 (229)
... ...+.|..
T Consensus 80 ~~~~~~~~~~~~ 91 (100)
T 1psr_A 80 DIATDYHKQSHG 91 (100)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHhcC
Confidence 643 34445543
No 248
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=99.06 E-value=1.5e-10 Score=78.73 Aligned_cols=67 Identities=16% Similarity=0.250 Sum_probs=53.6
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++.+|..||.+++|+|+.+|+..++..++... +++ .+..++..+|.+++|.|+|+||..++....
T Consensus 32 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~-----~~~----~~~~l~~~~D~d~dg~i~~~eF~~~~~~~~ 98 (107)
T 2d58_A 32 EGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPK-----THL----ELKKLIGEVSSGSGETFSYPDFLRMMLGKR 98 (107)
T ss_dssp HHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCC-----CHH----HHHHHHHHHCSSSSSEECHHHHHHHHSSSS
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhCCCCCCeEcHHHHHHHHHHcc
Confidence 5678899999999999999999999998775322 222 367788899999999999999999887543
No 249
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=99.06 E-value=1.2e-09 Score=70.83 Aligned_cols=66 Identities=17% Similarity=0.182 Sum_probs=60.2
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
.+..+|..+|.+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++....
T Consensus 15 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~ 80 (85)
T 2ktg_A 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEYG 80 (85)
T ss_dssp HHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh
Confidence 367899999999999999999999999987778888999999999999999999999999987653
No 250
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.05 E-value=3e-10 Score=84.55 Aligned_cols=147 Identities=11% Similarity=0.063 Sum_probs=109.3
Q ss_pred ccCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhc------CC--ChhHHHHHH------hccCccCCCC---
Q psy8447 9 LLPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVS------GL--PPSNVTERY------KGFSPFSFQG--- 71 (229)
Q Consensus 9 ~~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~------~l--~~~~~~~l~------~~f~~~d~~~--- 71 (229)
..+.+|++++..++..|..++.+++|. +...++....+.. +. +..++..+. ..|...|.++
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~dG~--i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~ 81 (186)
T 2hps_A 4 ITESERAYHLRKMKTRMQRVDVTGDGF--ISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEA 81 (186)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTCSSE--EEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHH
T ss_pred ccccccHHHHHHHHHHhhhcCCCCCCc--cCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 345678999999999999998877765 7777777666543 33 345666664 4455555543
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHH--HHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIF--CAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREE 149 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf--~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e 149 (229)
|+..+ .++............+...| ..||.+++|.|+++||..++..+....+.+.+..+|..+|.|++|.|+++|
T Consensus 82 I~~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~e 159 (186)
T 2hps_A 82 AVNAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDE 159 (186)
T ss_dssp HHHHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHH
T ss_pred ccHHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHH
Confidence 88888 55554332122112233444 788999999999999999999987778889999999999999999999999
Q ss_pred HHHHHHHHhh
Q psy8447 150 MFQLLRNSLI 159 (229)
Q Consensus 150 ~~~~l~~~~~ 159 (229)
|..++..+..
T Consensus 160 f~~~~~~~~~ 169 (186)
T 2hps_A 160 FLVTVNDFLF 169 (186)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999987654
No 251
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=99.05 E-value=1.1e-09 Score=71.11 Aligned_cols=65 Identities=28% Similarity=0.328 Sum_probs=59.5
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
..+..+|..+|.+++|.|+..||..++..+. ..+.+.+..+|..+|.+++|.|+++||..++...
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 75 (86)
T 2opo_A 11 ADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN 75 (86)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence 3468899999999999999999999999988 7888899999999999999999999999998753
No 252
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.05 E-value=2.8e-11 Score=106.35 Aligned_cols=109 Identities=13% Similarity=0.099 Sum_probs=38.8
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|+.+|.|++|.|+++||..++..+....+++.++.+|+.+|.|++|.|+++||..++..+.. . +
T Consensus 13 l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~--------~----~ 80 (624)
T 1djx_A 13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ--------R----A 80 (624)
T ss_dssp -------------------------------------------------------CTTHHHHHHTC--------C----H
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc--------H----H
Confidence 678999999999999999999999998877777889999999999999999999999999987632 1 1
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHhcC--h------HHHHHhcccCCC
Q psy8447 174 LVELALRKMDYDKDGKISFQDFQQSVTDE--P------LLLEAFGQCLPS 215 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~Is~~ef~~~~~~~--~------~~~~~~~~~~~~ 215 (229)
.+..+|+.+|.+ +|.|+++||..++... . .+.+++..+.+.
T Consensus 81 el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d 129 (624)
T 1djx_A 81 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPS 129 (624)
T ss_dssp HHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCC
Confidence 378899999975 8999999999999742 1 244556555544
No 253
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=99.05 E-value=8.5e-10 Score=71.77 Aligned_cols=69 Identities=12% Similarity=0.092 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 126 ~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
....++.+|..||.+++|+|+..|+..+++.++... ++.. .+.+..++..+|.+++|.|+| ||+.++..
T Consensus 12 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~-----~~~~-~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 12 EKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTY-----TKRE-TEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCC-----SHHH-HHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCC-----CHHH-HHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 345788899999999999999999999888765322 2222 123677888899999999999 99887653
No 254
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=99.04 E-value=2.1e-10 Score=75.84 Aligned_cols=67 Identities=21% Similarity=0.338 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhc-CCCCC-cccHHHHHHHHHH-----HhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy8447 127 EELIKFTFLIYD-LNNDG-FITREEMFQLLRN-----SLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSV 199 (229)
Q Consensus 127 ~~~~~~~F~~~D-~~~~G-~I~~~e~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~ 199 (229)
.+.++.+|..|| .+++| +|+.+||..++.. ++... +++ .++.++..+|.+++|.|+|+||+.++
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~-----~~~----~~~~~~~~~D~d~dg~i~~~eF~~~~ 78 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQK-----DAD----AVDKIMKELDENGDGEVDFQEFVVLV 78 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCC-----CHH----HHHHHHHHHHHCTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCC-----CHH----HHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 357889999999 79999 9999999999987 54322 222 37789999999999999999999988
Q ss_pred hcC
Q psy8447 200 TDE 202 (229)
Q Consensus 200 ~~~ 202 (229)
...
T Consensus 79 ~~~ 81 (93)
T 1k2h_A 79 AAL 81 (93)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 255
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=99.04 E-value=1.6e-09 Score=71.11 Aligned_cols=65 Identities=18% Similarity=0.160 Sum_probs=59.7
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
.+..+|..+|.+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++...
T Consensus 21 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~ 85 (90)
T 1avs_A 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85 (90)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH
Confidence 36789999999999999999999999988777888899999999999999999999999998764
No 256
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=99.03 E-value=2.8e-10 Score=78.05 Aligned_cols=65 Identities=18% Similarity=0.172 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
.+.++.+|+.||.|++|+|+.+|+..+++ +. ..+.+ .+..+++.+|.++||.|+|+||+.++...
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~-----~~~~~----~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILM--QS-----SLPQA----QLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TT-----CCCHH----HHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hC-----CCCHH----HHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 35678899999999999999999998886 21 12222 36778888999999999999999887643
No 257
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=99.02 E-value=7.1e-10 Score=70.21 Aligned_cols=65 Identities=18% Similarity=0.200 Sum_probs=58.9
Q ss_pred HHHHHHHHH-ccCCC-CceeHHHHHHHHHhhccCC--hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 93 LMERIFCAF-DRLCD-GVIHLDEWVLGLSCFLRGT--NEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 93 ~~~~lf~~~-d~~~~-g~I~~~ef~~~~~~~~~~~--~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
.+..+|..+ |.+++ |.|+..||..++..+.... +.+.+..+|..+|.+++|.|+++||..++..+
T Consensus 6 ~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 6 EIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 378899999 99999 9999999999999887666 77789999999999999999999999988754
No 258
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=99.01 E-value=3.2e-10 Score=74.36 Aligned_cols=66 Identities=18% Similarity=0.312 Sum_probs=54.7
Q ss_pred HHHHHHHHHhc-CCCCC-cccHHHHHHHHHH---HhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYD-LNNDG-FITREEMFQLLRN---SLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~G-~I~~~e~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
..++.+|..|| .+++| .|+.+|+..+++. ++... ++. .++.+++.+|.+++|.|+|+||..++...
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~-----~~~----~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKL-----QDA----EIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGT-----TSH----HHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCC-----CHH----HHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 57889999999 59999 9999999999987 54322 222 37889999999999999999999988653
No 259
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=99.00 E-value=2.3e-10 Score=82.44 Aligned_cols=83 Identities=8% Similarity=0.038 Sum_probs=64.8
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+..+|..+|.+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++... .+
T Consensus 50 l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~--------------~~ 115 (147)
T 1wy9_A 50 FKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK--------------RS 115 (147)
T ss_dssp HHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS--------------GG
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh--------------HH
Confidence 6778899999999999999999999888777778889999999999999999999998887532 11
Q ss_pred HHHHHHHHcCCCCCCcc
Q psy8447 174 LVELALRKMDYDKDGKI 190 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg~I 190 (229)
.+..+|+.+|.+++|..
T Consensus 116 ~~~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 116 AILRMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGGGGCCCC-----
T ss_pred HHHHHHHHHccCCCCCC
Confidence 25668899998888863
No 260
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=99.00 E-value=4.1e-10 Score=70.33 Aligned_cols=64 Identities=25% Similarity=0.291 Sum_probs=58.0
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
..+..+|..+|.+++|.|+..||..++..+....+.+.+..+|..+|.+++|.|+++||..++.
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp HHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 3378899999999999999999999999887778888999999999999999999999998874
No 261
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=99.00 E-value=1.8e-09 Score=71.09 Aligned_cols=64 Identities=20% Similarity=0.187 Sum_probs=57.0
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
..+..+|+.+|.+++|.|+.+||..++..+. .+...+..+|..+|.+++|.|+++||..++..+
T Consensus 27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~~ 90 (91)
T 2pmy_A 27 ARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFLGS 90 (91)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 3368899999999999999999999998875 667889999999999999999999999988653
No 262
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.00 E-value=3.2e-10 Score=103.70 Aligned_cols=112 Identities=13% Similarity=0.180 Sum_probs=89.7
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGV 171 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~ 171 (229)
..+..+|..||.|++|.|+..||..++..+....+...+..+|..+|.|++|.|+++||..++....... ...+
T Consensus 725 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~----~~~~-- 798 (863)
T 1sjj_A 725 NEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADT----DTAD-- 798 (863)
T ss_dssp HHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTC----SSSH--
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC----CCHH--
Confidence 3367899999999999999999999999888777788999999999999999999999999987653211 1112
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHHHHhcccC
Q psy8447 172 RDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLLEAFGQCL 213 (229)
Q Consensus 172 ~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~~~~~~~~ 213 (229)
.+..+|+.+ .+++|.|+.+||..++. ...+-.++....
T Consensus 799 --~l~~aF~~~-~d~~G~Is~~El~~~l~-~~~~~~l~~~~d 836 (863)
T 1sjj_A 799 --QVMASFKIL-AGDKNYITVDELRRELP-PDQAEYCIARMA 836 (863)
T ss_dssp --HHHHHHHGG-GTSSSEEEHHHHHHHSC-HHHHHHHHHHSE
T ss_pred --HHHHHHHHH-hCCCCcCcHHHHHHHCC-HHHHHHHHHHcc
Confidence 367789999 89999999999999986 223344454443
No 263
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.99 E-value=1.2e-09 Score=72.91 Aligned_cols=71 Identities=23% Similarity=0.450 Sum_probs=52.6
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
+.++.+|+.||. ++|+|+.+|+..+++..+........+++ .+..+++.+|.|+||.|+|+||+.++....
T Consensus 9 ~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~----ev~~l~~~~D~d~dG~I~f~EF~~~~~~~~ 79 (96)
T 1a4p_A 9 ETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPL----AVDKIMKDLDQCRDGKVGFQSFFSLIAGLT 79 (96)
T ss_dssp HHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTT----HHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 578899999994 56799999999999862110000011122 378899999999999999999999887543
No 264
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.98 E-value=2e-09 Score=72.68 Aligned_cols=83 Identities=12% Similarity=0.103 Sum_probs=67.6
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMF 151 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~ 151 (229)
++..++...+..... .....+..+|+.+|.+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||.
T Consensus 6 ~~~~~~~~~l~~~~~--~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~ 83 (105)
T 1wlz_A 6 TADRDILARLHKAVT--SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83 (105)
T ss_dssp TCCHHHHHHHHHHHH--HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHH
T ss_pred hhHHHHHHHHHHHHH--chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHH
Confidence 444555555554322 223347889999999999999999999999998878888999999999999999999999999
Q ss_pred HHHHH
Q psy8447 152 QLLRN 156 (229)
Q Consensus 152 ~~l~~ 156 (229)
.++..
T Consensus 84 ~~~~~ 88 (105)
T 1wlz_A 84 SRFSS 88 (105)
T ss_dssp HHHC-
T ss_pred HHHhc
Confidence 98864
No 265
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.98 E-value=6.2e-10 Score=71.54 Aligned_cols=65 Identities=23% Similarity=0.346 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHhhc-cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 91 EILMERIFCAFDRLCDGVIHLDEWVLGLSCFL-RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 91 ~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~-~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
...+. +|..+|.+++|.|+..||..++..+. ...+...+..+|..+|.+++|.|+++||..++..
T Consensus 8 ~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 73 (81)
T 1c7v_A 8 EEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 73 (81)
T ss_dssp HHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred HHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 34478 99999999999999999999999887 7778899999999999999999999999998864
No 266
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=98.97 E-value=2.4e-09 Score=73.54 Aligned_cols=72 Identities=19% Similarity=0.311 Sum_probs=55.3
Q ss_pred HHHHHHHHHhcC-CCCC-cccHHHHHHHHH-HHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYDL-NNDG-FITREEMFQLLR-NSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D~-~~~G-~I~~~e~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++.+|+.||. |++| +|+.+||..+++ .++........++ ..++.+++.+|.|+||.|+|+||+.++....
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~----~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~ 86 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNE----KVIEHIMEDLDTNADKQLSFEEFIMLMARLT 86 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCH----HHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCH----HHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH
Confidence 468899999995 9999 999999999998 4432110000122 2478899999999999999999999887543
No 267
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.97 E-value=3.2e-10 Score=73.92 Aligned_cols=60 Identities=25% Similarity=0.243 Sum_probs=55.9
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQL 153 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~ 153 (229)
+..+|..+|.+++|.|+..||..++..+....+.+.+..+|..+|.+++|.|+++||..+
T Consensus 25 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~ 84 (87)
T 1s6j_A 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84 (87)
T ss_dssp TTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 678999999999999999999999999888888899999999999999999999999764
No 268
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.96 E-value=1.1e-09 Score=70.59 Aligned_cols=65 Identities=23% Similarity=0.257 Sum_probs=57.5
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhc--cCChHHHHHH----HHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFL--RGTNEELIKF----TFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~--~~~~~~~~~~----~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
+..+|..+|.+++|.|+.+||..++..+. ...+.+.+.. +|..+|.+++|.|+++||...+..+.
T Consensus 9 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~~ 79 (83)
T 1yx7_A 9 LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAELL 79 (83)
T ss_dssp HHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHHH
Confidence 68899999999999999999999999887 5666667777 99999999999999999998876653
No 269
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.96 E-value=2.4e-09 Score=71.72 Aligned_cols=63 Identities=16% Similarity=0.192 Sum_probs=57.4
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
+..+|+.+|.|++|.|+.+|+..++... +.+.+.+..+|+.+|.|++|.|+++||..++..+.
T Consensus 13 ~~~~F~~~D~d~dG~Is~~el~~~l~~~--~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 75 (99)
T 1qjt_A 13 YEKYYRQVEAGNTGRVLALDAAAFLKKS--GLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVA 75 (99)
T ss_dssp HHHHHHHHCCTTSSCCCSHHHHHHHHTS--SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHc--CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 6889999999999999999999999876 46788999999999999999999999999997654
No 270
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.95 E-value=1.1e-09 Score=74.38 Aligned_cols=64 Identities=19% Similarity=0.218 Sum_probs=53.8
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
.+++.+|+.||. ++|+|+.+|+..+++.++ .+++ .+..++..+|.|+||.|+|+||..+|....
T Consensus 15 ~~~~~~F~~~D~-~dG~Is~~el~~~l~~~g-------l~~~----el~~i~~~~D~d~dG~id~~EF~~~m~~~~ 78 (106)
T 1eh2_A 15 AKYDAIFDSLSP-VNGFLSGDKVKPVLLNSK-------LPVD----ILGRVWELSDIDHDGMLDRDEFAVAMFLVY 78 (106)
T ss_dssp HHHHHHHTTSCC-SSSCCBHHHHHHHHHTTT-------CCHH----HHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeEcHHHHHHHHHHcC-------CCHH----HHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 568889999999 999999999999998653 1222 377899999999999999999999886543
No 271
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.94 E-value=2.9e-09 Score=71.47 Aligned_cols=64 Identities=17% Similarity=0.004 Sum_probs=55.4
Q ss_pred HHHHHHHHc-cCCC-CceeHHHHHHHHHh-h----ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCD-GVIHLDEWVLGLSC-F----LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~-g~I~~~ef~~~~~~-~----~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.|| +|++ |.|+..|+..++.. + ....+.+.+..+++.+|.|++|.|+++||..++..+
T Consensus 12 l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 12 IVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 678999997 8887 99999999999986 3 344567889999999999999999999999988765
No 272
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.93 E-value=1.6e-09 Score=76.87 Aligned_cols=65 Identities=18% Similarity=0.191 Sum_probs=54.9
Q ss_pred hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 126 ~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
....++.+|+.|| +++|+|+.+|+..+++..+ . +++ .+..++...|.|+||.|+|+||+.+|...
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~g--l-----~~~----el~~I~~~~D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKSK--L-----PNT----VLGKIWKLADVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHTT--C-----CHH----HHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHhC--c-----CHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3567899999999 9999999999999998743 1 222 37889999999999999999999988644
No 273
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.93 E-value=3.3e-09 Score=70.54 Aligned_cols=65 Identities=15% Similarity=0.135 Sum_probs=57.6
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
..+..+|+.+|.|++|.|+.+|+..++..+ +.+.+.+..+|..+|.|++|.|+++||..++..+.
T Consensus 10 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~--g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 74 (95)
T 1c07_A 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKT--GLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLIS 74 (95)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHTT--TCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHc--CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 336789999999999999999999999876 46678899999999999999999999999987643
No 274
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.93 E-value=6e-09 Score=69.63 Aligned_cols=64 Identities=19% Similarity=0.061 Sum_probs=54.9
Q ss_pred HHHHHHHHc-cCCCC-ceeHHHHHHHHHh-----hccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCDG-VIHLDEWVLGLSC-----FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g-~I~~~ef~~~~~~-----~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.|| +|++| .|+..|+..++.. +....+.+.+..+++.+|.|++|.|+++||..++..+
T Consensus 13 l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 83 (98)
T 3n22_A 13 LVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALI 83 (98)
T ss_dssp HHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 678899997 78885 9999999999986 2334567889999999999999999999999998765
No 275
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=98.93 E-value=4.7e-09 Score=72.12 Aligned_cols=81 Identities=17% Similarity=0.194 Sum_probs=57.1
Q ss_pred HHHHHHHHc-cCCCC-ceeHHHHHHHHH-hhccC-----ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCC
Q psy8447 94 MERIFCAFD-RLCDG-VIHLDEWVLGLS-CFLRG-----TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDE 165 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g-~I~~~ef~~~~~-~~~~~-----~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~ 165 (229)
+..+|..|| ++++| .|+..||..++. .+... .+...+..+|..+|.|++|.|+++||..++..+..
T Consensus 14 l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~~------ 87 (113)
T 1xk4_C 14 IINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTW------ 87 (113)
T ss_dssp HHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHH------
T ss_pred HHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHHH------
Confidence 678899999 49999 999999999998 44321 35778999999999999999999999999876521
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCc
Q psy8447 166 DPDEGVRDLVELALRKMDYDKDGK 189 (229)
Q Consensus 166 ~~~~~~~~~~~~~~~~~d~~~dg~ 189 (229)
.+...|...| +++|.
T Consensus 88 --------~~~~~f~~~~-~~~g~ 102 (113)
T 1xk4_C 88 --------ASHEKMHEGD-EGPGH 102 (113)
T ss_dssp --------HHHC------------
T ss_pred --------HHHHHHhhCC-CCCcc
Confidence 2555777777 77775
No 276
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=98.92 E-value=5.9e-09 Score=67.69 Aligned_cols=65 Identities=14% Similarity=0.006 Sum_probs=58.9
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHH---HHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEEL---IKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~---~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
..+..+|..+|.+++|.|+..||..++..+....+... +..+|..+|.+++|.|++ ||..++...
T Consensus 14 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~~ 81 (86)
T 1j7q_A 14 DECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSKW 81 (86)
T ss_dssp HHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHHH
Confidence 33688999999999999999999999999887778888 999999999999999999 999988764
No 277
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=98.92 E-value=4.8e-09 Score=69.12 Aligned_cols=66 Identities=17% Similarity=0.122 Sum_probs=59.5
Q ss_pred HHHHHHHHHc-cCCCC-ceeHHHHHHHHHh-----hccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 93 LMERIFCAFD-RLCDG-VIHLDEWVLGLSC-----FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 93 ~~~~lf~~~d-~~~~g-~I~~~ef~~~~~~-----~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
.+..+|..+| .+++| .|+..||..++.. +....+.+.+..+|..+|.+++|.|+++||..++..+.
T Consensus 10 ~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 82 (93)
T 1k2h_A 10 TLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (93)
T ss_dssp HHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 3688999999 79999 9999999999987 66677888999999999999999999999999987653
No 278
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.91 E-value=2.7e-09 Score=71.26 Aligned_cols=70 Identities=19% Similarity=0.348 Sum_probs=53.9
Q ss_pred HHHHHHHHHhc-CCCCC-cccHHHHHHHHHH-HhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcC
Q psy8447 128 ELIKFTFLIYD-LNNDG-FITREEMFQLLRN-SLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDE 202 (229)
Q Consensus 128 ~~~~~~F~~~D-~~~~G-~I~~~e~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~ 202 (229)
..++.+|..|| .+++| +|+.+|+..++.. ++... ....++. .++.++..+|.|++|.|+|+||..++...
T Consensus 13 ~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~-~~~~~~~----~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 13 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFT-QNQKDPG----VLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHH-HHCCCTH----HHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhc-cccCCHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 47889999998 99999 9999999999973 32000 0011222 37889999999999999999999988654
No 279
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.90 E-value=5.6e-09 Score=71.46 Aligned_cols=63 Identities=16% Similarity=0.187 Sum_probs=56.0
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
.+..+|+.+|.|++|.|+.+|+..++. ....+.+.+..+|..+|.|++|.|+++||..++..+
T Consensus 15 ~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~ 77 (111)
T 2kgr_A 15 KYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLI 77 (111)
T ss_dssp HHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 367899999999999999999999998 345677889999999999999999999999998754
No 280
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.90 E-value=4.8e-09 Score=69.26 Aligned_cols=62 Identities=13% Similarity=0.043 Sum_probs=55.4
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.+|.|++|.|+.+|+..++..+ +.+.+.+..++..+|.|++|.|+++||..++..+
T Consensus 11 ~~~~F~~~D~d~dG~I~~~el~~~l~~~--g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 11 YVNQFKTIQPDLNGFIPGSAAKEFFTKS--KLPILELSHIWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp HHHHHTTTCCSTTCEEEHHHHHHHHHHH--SSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHc--CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 5778999999999999999999999876 3567889999999999999999999999988754
No 281
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.90 E-value=2.7e-09 Score=95.87 Aligned_cols=129 Identities=11% Similarity=0.081 Sum_probs=94.7
Q ss_pred cCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHH-------ccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHH
Q psy8447 64 FSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAF-------DRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLI 136 (229)
Q Consensus 64 f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~-------d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~ 136 (229)
|+....+.|+..++..++.... .....+..+++.. |.+++|.|+|+||+.++..+.. ..+++.+|+.
T Consensus 164 fd~n~dG~Is~kEl~~~l~~~~---~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~---R~EI~eiF~~ 237 (816)
T 3qr0_A 164 TVEMEKNKIPVKAIQKCLSKDK---DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE---RSEIEGIFKE 237 (816)
T ss_dssp HTSCCSSEEEHHHHHHHHCSCH---HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC---CTHHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHhcC---ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC---HHHHHHHHHH
Confidence 4533334499999999887532 2223366777777 5778899999999999998853 3479999999
Q ss_pred hcCCCCCcccHHHHHHHHHHHhhcC-CCCC----CChHHHHHHHHHHHHHcCC--C----CCCcccHHHHHHHHhcCh
Q psy8447 137 YDLNNDGFITREEMFQLLRNSLISH-PQDE----DPDEGVRDLVELALRKMDY--D----KDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 137 ~D~~~~G~I~~~e~~~~l~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~d~--~----~dg~Is~~ef~~~~~~~~ 203 (229)
|+.+++|.|+. ||..+|+...... ..+. .+.+ .++.+++.++. + ++|.|++++|..+|....
T Consensus 238 y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e----~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~~ 310 (816)
T 3qr0_A 238 LSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDA----QCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCEE 310 (816)
T ss_dssp HTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHH----HHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSGG
T ss_pred HccCCCCcccH-HHHHHHHHhCCccccccccccccCHH----HHHHHHHHhccccchhhhccCCccHHHHHHHhhccc
Confidence 99999999999 9999999875321 1110 2333 36667777665 4 689999999999998553
No 282
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.89 E-value=9.3e-09 Score=67.88 Aligned_cols=63 Identities=14% Similarity=0.170 Sum_probs=55.4
Q ss_pred HHHHHHHHccCCCC---ceeHHHHHHHHHh-----hccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDG---VIHLDEWVLGLSC-----FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~~~~g---~I~~~ef~~~~~~-----~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|..+| +++| .|+..|+..++.. +....+...+..+|+.+|.|++|.|+++||..++..+
T Consensus 11 l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 11 LIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 678899999 6666 9999999999988 6566778899999999999999999999999998765
No 283
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.88 E-value=8e-09 Score=70.75 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=55.2
Q ss_pred HHHHHHHHHc-cCCCC-ceeHHHHHHHHHh-----hccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 93 LMERIFCAFD-RLCDG-VIHLDEWVLGLSC-----FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 93 ~~~~lf~~~d-~~~~g-~I~~~ef~~~~~~-----~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
.+..+|+.|| .+++| .|+..||..++.. +....+++.+..+++.+|.|++|.|+++||..++...
T Consensus 23 ~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 23 VMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 3678999999 89997 9999999999975 3334566789999999999999999999999988754
No 284
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=98.87 E-value=6.3e-09 Score=70.60 Aligned_cols=63 Identities=10% Similarity=0.032 Sum_probs=57.8
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
+..+|..+|.+++|.|+..||..++..+....+...+..+|..+|.+++|.|+++||..++..
T Consensus 34 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~ 96 (107)
T 2d58_A 34 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 96 (107)
T ss_dssp HHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSS
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 678899999999999999999999999887788889999999999999999999999988753
No 285
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.86 E-value=1.3e-08 Score=67.30 Aligned_cols=64 Identities=19% Similarity=0.126 Sum_probs=52.5
Q ss_pred HHHHHHHHc-cCCC-CceeHHHHHHHHHh-hc----cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCD-GVIHLDEWVLGLSC-FL----RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~-g~I~~~ef~~~~~~-~~----~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.|| .|++ |.|+..|+..++.. +. ...+++.+..+++.+|.|++|.|+++||..++..+
T Consensus 12 l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 12 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 678899997 5774 89999999999985 32 23457789999999999999999999999988765
No 286
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.86 E-value=1.4e-08 Score=68.48 Aligned_cols=64 Identities=19% Similarity=0.140 Sum_probs=53.3
Q ss_pred HHHHHHHHc-cCCC-CceeHHHHHHHHHh-hc----cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCD-GVIHLDEWVLGLSC-FL----RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~-g~I~~~ef~~~~~~-~~----~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.|| .|++ |.|+.+||..++.. +. ...+.+.+..+++.+|.|++|.|+++||..++..+
T Consensus 15 l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 15 MVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 677899997 6775 79999999999985 32 23467889999999999999999999999988765
No 287
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.85 E-value=8e-09 Score=65.24 Aligned_cols=61 Identities=20% Similarity=0.415 Sum_probs=50.8
Q ss_pred ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcC-CC----CCCcccHHHHHHHH
Q psy8447 125 TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMD-YD----KDGKISFQDFQQSV 199 (229)
Q Consensus 125 ~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~----~dg~Is~~ef~~~~ 199 (229)
.+.+.++.+|+.| .+++|+|+.+|+++. .+++. ++.+++.+| .+ ++|.|+|++|..+|
T Consensus 7 ~~~eel~eAFr~f-~dg~G~It~~eLr~~------------lt~ee----vd~~i~~~d~~dg~~~~dG~idY~eF~~~m 69 (75)
T 1h8b_A 7 DTAEQVIASFRIL-ASDKPYILAEELRRE------------LPPDQ----AQYCIKRMPAYSGPGSVPGALDYAAFSSAL 69 (75)
T ss_dssp STHHHHHHHHHHH-TTSCSSBCHHHHHHH------------SCHHH----HHHHHHHSCSCCCSSCCTTCBCHHHHHHHH
T ss_pred CCHHHHHHHHHHH-hcCCCCcCHHHHHhc------------CCHHH----HHHHHHhcCcccCCCCCCCcCcHHHHHHHH
Confidence 4678899999999 999999999999992 13433 777999999 56 58999999999988
Q ss_pred hcC
Q psy8447 200 TDE 202 (229)
Q Consensus 200 ~~~ 202 (229)
...
T Consensus 70 ~~~ 72 (75)
T 1h8b_A 70 YGE 72 (75)
T ss_dssp TCC
T ss_pred hcc
Confidence 765
No 288
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.85 E-value=1.5e-08 Score=67.87 Aligned_cols=64 Identities=16% Similarity=0.155 Sum_probs=55.2
Q ss_pred HHHHHHHHc-cCCCC-ceeHHHHHHHHHh-----hccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCDG-VIHLDEWVLGLSC-----FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g-~I~~~ef~~~~~~-----~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.|| .+++| .|+..||..++.. +....+...+..++..+|.|++|.|+++||..++...
T Consensus 12 l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 12 LITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 678999997 88887 9999999999976 3334567889999999999999999999999988764
No 289
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.83 E-value=1e-08 Score=68.10 Aligned_cols=64 Identities=19% Similarity=0.169 Sum_probs=55.8
Q ss_pred HHHHHHHHc-cCCCC-ceeHHHHHHHHHh-----hccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCDG-VIHLDEWVLGLSC-----FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g-~I~~~ef~~~~~~-----~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.|| ++++| .|+..||..++.. +....+...+..+++.+|.|++|.|+++||..++...
T Consensus 14 l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~~ 84 (95)
T 2wcb_A 14 IVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA 84 (95)
T ss_dssp HHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 678999999 88987 9999999999976 3344567889999999999999999999999998754
No 290
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.83 E-value=9.4e-09 Score=67.19 Aligned_cols=64 Identities=17% Similarity=0.094 Sum_probs=57.5
Q ss_pred HHHHHHHHc-cCCCC-ceeHHHHHHHHHh---hccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCDG-VIHLDEWVLGLSC---FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g-~I~~~ef~~~~~~---~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|..+| ++++| .|+..||..++.. +....+...++.+|+.+|.+++|.|+++||..++..+
T Consensus 12 l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 12 LVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 678999999 69999 9999999999997 6656677889999999999999999999999998764
No 291
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.82 E-value=4.4e-09 Score=66.79 Aligned_cols=64 Identities=20% Similarity=0.211 Sum_probs=55.7
Q ss_pred HHHHHHHHcc-CCCC-ceeHHHHHHHHHh-hccCC-hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDR-LCDG-VIHLDEWVLGLSC-FLRGT-NEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~-~~~g-~I~~~ef~~~~~~-~~~~~-~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|..+|. +++| .|+..||..++.. +.... +...+..+|..+|.+++|.|+++||..++..+
T Consensus 9 l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 76 (78)
T 1cb1_A 9 LKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI 76 (78)
T ss_dssp HHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHh
Confidence 6889999999 9999 9999999999986 44334 56678899999999999999999999988654
No 292
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.81 E-value=1.4e-08 Score=67.37 Aligned_cols=64 Identities=11% Similarity=0.133 Sum_probs=51.2
Q ss_pred HHHHHHHHc-cCC-CCceeHHHHHHHHHhh-----ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLC-DGVIHLDEWVLGLSCF-----LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~-~g~I~~~ef~~~~~~~-----~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.|| .++ +|.|+..|+..++... ....+.+.+..+++.+|.|++|.|+++||..++...
T Consensus 11 l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 11 IIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 678999999 688 5899999999999763 223455688999999999999999999999988754
No 293
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.79 E-value=1.3e-08 Score=67.20 Aligned_cols=64 Identities=20% Similarity=0.064 Sum_probs=55.7
Q ss_pred HHHHHHHHc-cCCCC-ceeHHHHHHHHHhhcc--CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCDG-VIHLDEWVLGLSCFLR--GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g-~I~~~ef~~~~~~~~~--~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.+| ++++| .|+..||..++..... ..+...+..+|..+|.|++|.|+++||..++..+
T Consensus 12 l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 12 MVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 678999999 99999 9999999999986422 2556678999999999999999999999998765
No 294
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=98.79 E-value=8.6e-09 Score=68.11 Aligned_cols=64 Identities=14% Similarity=0.115 Sum_probs=54.3
Q ss_pred HHHHHHHHcc-CCCC-ceeHHHHHHHH-HhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDR-LCDG-VIHLDEWVLGL-SCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~-~~~g-~I~~~ef~~~~-~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.+|. +++| .|+..||..++ ..+....+...+..+|+.+|.|++|.|+++||..++..+
T Consensus 12 l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 12 IIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 6789999999 9999 99999999999 544332333567899999999999999999999998765
No 295
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.78 E-value=6e-09 Score=71.18 Aligned_cols=63 Identities=11% Similarity=-0.006 Sum_probs=55.3
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
.+..+|+.||.|++|.|+.+|+..++... +.+.+.+..+|+.+|.|++|.|+++||..++..+
T Consensus 23 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~--gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 23 YYVNQFRSLQPDPSSFISGSVAKNFFTKS--KLSIPELSYIWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHCCSS--SCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 36789999999999999999999998765 3556678999999999999999999999998754
No 296
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.76 E-value=5.1e-08 Score=65.30 Aligned_cols=65 Identities=18% Similarity=0.145 Sum_probs=54.9
Q ss_pred HHHHHHHHccCC---CCceeHHHHHHHHHhhccC-----ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 94 MERIFCAFDRLC---DGVIHLDEWVLGLSCFLRG-----TNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 94 ~~~lf~~~d~~~---~g~I~~~ef~~~~~~~~~~-----~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
+..+|+.||.++ +|.|+..|+..++...... ...+.+..+++.+|.|++|.|+++||..++..+.
T Consensus 13 l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 13 LVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp HHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 678999999863 7999999999999865422 2357899999999999999999999999998764
No 297
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.73 E-value=3.1e-08 Score=66.67 Aligned_cols=62 Identities=19% Similarity=0.172 Sum_probs=51.6
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHh----h-ccCCh-----------HHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSC----F-LRGTN-----------EELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~----~-~~~~~-----------~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+..+|..+|.|++|.|+..||..++.. . ..... ...+..+|..+|.|++|.|+++||..++.
T Consensus 22 ~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 99 (103)
T 1snl_A 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99 (103)
T ss_dssp HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence 678999999999999999999999985 2 22211 13488899999999999999999998874
No 298
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.73 E-value=9.4e-08 Score=74.64 Aligned_cols=95 Identities=12% Similarity=0.019 Sum_probs=77.6
Q ss_pred HHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh-------------cc
Q psy8447 57 VTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF-------------LR 123 (229)
Q Consensus 57 ~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~-------------~~ 123 (229)
+.-+++.|+....+.|++.+|...+..+.. .+.++-++.+|+.+| |++|.|+.+|+..++..+ ..
T Consensus 134 a~~lf~~FD~~~~G~I~f~ef~~aLs~l~r-G~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~ 211 (261)
T 1eg3_A 134 LNWLLNVYDTGRTGRIRVLSFKTGIISLCK-AHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGG 211 (261)
T ss_dssp HHHHHHHHCTTCCSEEEHHHHHHHHHHTSS-SCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTC
T ss_pred HHHHHHHccCCCCceEeHHHHHHHHHHHcC-CCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 344778888777667999999999998766 455555899999999 999999999999988552 11
Q ss_pred CChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 124 GTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 124 ~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
...+..++.+|+..| ++|.|+.+||..-++
T Consensus 212 ~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~ 241 (261)
T 1eg3_A 212 SNIEPSVRSCFQFAN--NKPEIEAALFLDWMR 241 (261)
T ss_dssp SCCHHHHHHHHHHTT--TCSCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCC--CCCcCCHHHHHHHHH
Confidence 245778999999996 889999999998875
No 299
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.73 E-value=3.7e-08 Score=66.71 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=53.4
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
...+|+.+|+ ++|.|+..|+..++... +.+.+.+..+++..|.|++|.|+++||..++..+
T Consensus 17 ~~~~F~~~D~-~dG~Is~~el~~~l~~~--gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~ 77 (106)
T 1eh2_A 17 YDAIFDSLSP-VNGFLSGDKVKPVLLNS--KLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLV 77 (106)
T ss_dssp HHHHHTTSCC-SSSCCBHHHHHHHHHTT--TCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHhCC-CCCeEcHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 5678999999 99999999999999875 4677889999999999999999999999988654
No 300
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.72 E-value=5.3e-08 Score=68.97 Aligned_cols=63 Identities=14% Similarity=0.141 Sum_probs=56.4
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
..+..+|+.|| +++|.|+..|+..++... +.+.+.+..+++..|.|++|.|+++||..++..+
T Consensus 51 ~~l~~~F~~fD-d~dG~Is~~El~~~l~~~--gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li 113 (139)
T 2jq6_A 51 PTYDEIFYTLS-PVNGKITGANAKKEMVKS--KLPNTVLGKIWKLADVDKDGLLDDEEFALANHLI 113 (139)
T ss_dssp HHHHHHHHHSC-CSSSEEEHHHHHHHHHHT--TCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCeECHHHHHHHHHHh--CcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 34688999999 999999999999999874 4778889999999999999999999999998654
No 301
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.71 E-value=4.1e-08 Score=65.40 Aligned_cols=64 Identities=17% Similarity=0.272 Sum_probs=55.7
Q ss_pred HHHHHHHHc-cCCCC-ceeHHHHHHHHHh-hc----cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCDG-VIHLDEWVLGLSC-FL----RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g-~I~~~ef~~~~~~-~~----~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|..+| .+++| .|+..||..++.. +. ...+...+..+|..+|.+++|.|+++||..++..+
T Consensus 15 l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 15 LIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 678999998 99999 9999999999983 32 34566789999999999999999999999998765
No 302
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=98.71 E-value=2.8e-08 Score=67.34 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=52.4
Q ss_pred HHHHHHHHc-cCCC-CceeHHHHHHHHHh-hccCCh-HHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFD-RLCD-GVIHLDEWVLGLSC-FLRGTN-EELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d-~~~~-g~I~~~ef~~~~~~-~~~~~~-~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.|| .|++ |.|+..||..++.. +....+ .+.+..+++.+|.|++|.|+++||..++...
T Consensus 24 l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 24 VVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 678999999 7886 79999999999976 332222 3578899999999999999999999988764
No 303
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.70 E-value=9e-10 Score=76.93 Aligned_cols=96 Identities=16% Similarity=0.019 Sum_probs=51.3
Q ss_pred CChhHHHHHHhccCccCCCCCCHHHHHH-----HHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCCh
Q psy8447 52 LPPSNVTERYKGFSPFSFQGLDRVVFRE-----LLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTN 126 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~i~~~ef~~-----~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~ 126 (229)
++..++..++... .+.|++.+|.. ++............+..+|+.|| |.|+..|+..++..+.. +
T Consensus 9 ~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~lG~--t 78 (123)
T 2kld_A 9 DTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGKGH--T 78 (123)
T ss_dssp ----------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTTCCS--S
T ss_pred CCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHhCC--C
Confidence 3445666665544 34499999988 66543322222233566788887 99999999999987755 7
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 127 EELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 127 ~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
++.+..+|+.+|.|++|.|+++||..++..+
T Consensus 79 ~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~ 109 (123)
T 2kld_A 79 DAEIEAIFTKYDQDGDQELTEHEHQQMRDDL 109 (123)
T ss_dssp HHHHHHHHHHHSSSSCCEECSHHHHHCSCTT
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 8889999999999999999999999887554
No 304
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.68 E-value=3.3e-08 Score=89.12 Aligned_cols=130 Identities=13% Similarity=0.125 Sum_probs=83.2
Q ss_pred HHHHHHHHH--HHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCc-------cCCCCCCHHHHHHHHhhhcCCC
Q psy8447 18 VETLCKIFK--KLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSP-------FSFQGLDRVVFRELLHNTFDLV 88 (229)
Q Consensus 18 i~~l~~~f~--~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~-------~d~~~i~~~ef~~~l~~~~~~~ 88 (229)
...+++.|. .++.+++| +++..+ +...+.....++..++..++. ...+.|++.+|..++..+.
T Consensus 145 ~~~Lk~~F~~~~fD~d~dG--~Is~~E---L~~~l~~~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~--- 216 (799)
T 2zkm_X 145 STFLDKILVKLKMQLNSEG--KIPVKN---FFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC--- 216 (799)
T ss_dssp HHHHHHHHHHHHHSCCTTS--CEEHHH---HHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred HHHHHHHhHHhccCCCCCC--eECHHH---HHHHHhhhHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc---
Confidence 345777888 45555544 355444 444444456788888877763 2223399999999999864
Q ss_pred cHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc-C---------ChHHHHHHHHHHhcCC----CCCcccHHHHHHHH
Q psy8447 89 TEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR-G---------TNEELIKFTFLIYDLN----NDGFITREEMFQLL 154 (229)
Q Consensus 89 ~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~-~---------~~~~~~~~~F~~~D~~----~~G~I~~~e~~~~l 154 (229)
..++ +..+|+.||.+++|.|+.+||..++..... . .+.+.++.+++.+|.+ ++|.|+++||..+|
T Consensus 217 ~r~e-l~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L 295 (799)
T 2zkm_X 217 PRPE-IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL 295 (799)
T ss_dssp CCHH-HHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred CHHH-HHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcc
Confidence 2344 789999999999999999999999998742 2 4567899999999999 89999999999999
Q ss_pred HH
Q psy8447 155 RN 156 (229)
Q Consensus 155 ~~ 156 (229)
..
T Consensus 296 ~S 297 (799)
T 2zkm_X 296 CG 297 (799)
T ss_dssp HS
T ss_pred cC
Confidence 64
No 305
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=98.68 E-value=2.9e-09 Score=75.81 Aligned_cols=66 Identities=15% Similarity=0.227 Sum_probs=54.9
Q ss_pred HHHHHHHHHhcCC-CCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChH
Q psy8447 128 ELIKFTFLIYDLN-NDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 128 ~~~~~~F~~~D~~-~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
..+.++|..+|.| ++|+|+..|+..+++.+. ..+..+..+|+.+|.|+||.||++||..++...+.
T Consensus 77 ~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~-----------~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg~~~~ 143 (151)
T 1sra_A 77 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI-----------PMEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQK 143 (151)
T ss_dssp HHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS-----------TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTCCGG
T ss_pred hHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc-----------ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhCCCHH
Confidence 3688999999997 999999999998886442 11224788999999999999999999999876654
No 306
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=98.62 E-value=5.4e-08 Score=66.98 Aligned_cols=64 Identities=17% Similarity=0.210 Sum_probs=52.8
Q ss_pred HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
.+.+.+|+.+|. ++|+|+.+|++.++...+ . + .+.+.+|+...|.++||.|+++||..+|....
T Consensus 33 ~~y~~iF~~lD~-~dG~Isg~elr~~~~~sg--L-----p----~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li~ 96 (121)
T 3fia_A 33 AKHDQQFHSLKP-ISGFITGDQARNFFFQSG--L-----P----QPVLAQIWALADMNNDGRMDQVEFSIAMKLIK 96 (121)
T ss_dssp HHHHHHHHHTCC-BTTBEEHHHHHHHHGGGC--C-----C----HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeECHHHHHHHHHHcC--C-----C----HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHH
Confidence 467899999998 899999999999997542 2 2 22478899999999999999999999886543
No 307
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.62 E-value=8.2e-08 Score=63.80 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=51.6
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHh-----hccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSC-----FLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~-----~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.||. ++|.|+..|+..++.. +....+...+..++..+|.|++|.|+++||..++...
T Consensus 11 l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 11 MMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 6788999983 4669999999999875 2334456788999999999999999999999988764
No 308
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=98.57 E-value=4.7e-08 Score=65.53 Aligned_cols=63 Identities=21% Similarity=0.179 Sum_probs=49.7
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhh-----cc--CChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCF-----LR--GTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~-----~~--~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
+..+|+.||.+ +|.|+..|+..++... .. ..++..+..+++.+|.|++|.|+++||..++...
T Consensus 12 l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (100)
T 1psr_A 12 MIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 67789999876 6899999999988752 21 2344567888999999999999999999888654
No 309
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.57 E-value=3.1e-07 Score=83.18 Aligned_cols=131 Identities=11% Similarity=0.093 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccCcc-------CCCCCCHHHHHHHHhhhcCCCcHH
Q psy8447 19 ETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFSPF-------SFQGLDRVVFRELLHNTFDLVTEE 91 (229)
Q Consensus 19 ~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~~~-------d~~~i~~~ef~~~l~~~~~~~~~~ 91 (229)
..+++.|..+.-+.++.|++.. ..+.+.+.....++..+++..+.. ..+.|++++|..++..+.. ..
T Consensus 150 ~~L~kaf~~~~~D~n~dGkIs~---kel~~~l~~~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~---R~ 223 (885)
T 3ohm_B 150 TFLRKAYTKLKLQVNQDGRIPV---KNILKMFSADKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCL---RP 223 (885)
T ss_dssp HHHHHHHHHHHHSCCTTSCEEH---HHHHHTTGGGHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSC---CH
T ss_pred HHHHHHHHHhcCccCCCCccCH---HHHHHHHhcCHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCC---HH
Confidence 4567778874334444444543 333333333456677777666643 1223999999999998643 33
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccC----------ChHHHHHHHHHHhcCC----CCCcccHHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG----------TNEELIKFTFLIYDLN----NDGFITREEMFQLLRN 156 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~----------~~~~~~~~~F~~~D~~----~~G~I~~~e~~~~l~~ 156 (229)
+ +..+|+.+|.+++|.|+.+||..++...... .+.+.+..+++.|+.+ ++|.|+.++|..+|..
T Consensus 224 E-I~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~S 301 (885)
T 3ohm_B 224 D-IDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLGG 301 (885)
T ss_dssp H-HHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHTS
T ss_pred H-HHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhccC
Confidence 4 7999999999999999999999999987543 4678899999999999 7999999999999964
No 310
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=98.46 E-value=8.5e-07 Score=61.00 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=54.3
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
.+.+|+.+|+ ++|.|+-++...++... +.+.+.+..+++..|.|++|.|+++||..++.-+
T Consensus 35 y~~iF~~lD~-~dG~Isg~elr~~~~~s--gLp~~~L~~Iw~laD~d~dG~Ld~~EF~~aM~Li 95 (121)
T 3fia_A 35 HDQQFHSLKP-ISGFITGDQARNFFFQS--GLPQPVLAQIWALADMNNDGRMDQVEFSIAMKLI 95 (121)
T ss_dssp HHHHHHHTCC-BTTBEEHHHHHHHHGGG--CCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHhCC-CCCeECHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 4778999998 89999999999999865 5778889999999999999999999999988644
No 311
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.24 E-value=1.2e-06 Score=78.77 Aligned_cols=130 Identities=12% Similarity=0.135 Sum_probs=90.6
Q ss_pred HHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccC-------ccCCCCCCHHHHHHHHhhhcCCCcHHHHH
Q psy8447 22 CKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFS-------PFSFQGLDRVVFRELLHNTFDLVTEEILM 94 (229)
Q Consensus 22 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~-------~~d~~~i~~~ef~~~l~~~~~~~~~~~~~ 94 (229)
.+.+.++.-+.++.|++...++..+....+....++..+.+..+ ..+.+.|++++|..++..+.. .++ +
T Consensus 156 ~~~~~~~~fd~n~dG~Is~kEl~~~l~~~~~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~~---R~E-I 231 (816)
T 3qr0_A 156 EKLYFRLTTVEMEKNKIPVKAIQKCLSKDKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALLE---RSE-I 231 (816)
T ss_dssp HHHHHHHHHTSCCSSEEEHHHHHHHHCSCHHHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHCC---CTH-H
T ss_pred HHHHHHHhccCCCCCCCCHHHHHHHHHhcCChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcCC---HHH-H
Confidence 33444444455555556555555544332211233555555442 222234999999999998743 234 7
Q ss_pred HHHHHHHccCCCCceeHHHHHHHHHhhccC----------ChHHHHHHHHHHhcC--C----CCCcccHHHHHHHHHH
Q psy8447 95 ERIFCAFDRLCDGVIHLDEWVLGLSCFLRG----------TNEELIKFTFLIYDL--N----NDGFITREEMFQLLRN 156 (229)
Q Consensus 95 ~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~----------~~~~~~~~~F~~~D~--~----~~G~I~~~e~~~~l~~ 156 (229)
..+|+.++.+++|.|+. ||..++...... .+.+.++.+++.|+. + ++|.|+.++|..+|..
T Consensus 232 ~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S 308 (816)
T 3qr0_A 232 EGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMC 308 (816)
T ss_dssp HHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHS
T ss_pred HHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhc
Confidence 89999999999999999 999999987643 357889999999987 5 7899999999999964
No 312
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=98.19 E-value=4.6e-07 Score=64.49 Aligned_cols=60 Identities=22% Similarity=0.231 Sum_probs=52.9
Q ss_pred HHHHHHHHccC-CCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 94 MERIFCAFDRL-CDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 94 ~~~lf~~~d~~-~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+...|..+|.| ++|.|+..|+..++..+. .++.-+..+|+.+|.|++|.||.+||...+.
T Consensus 79 l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg 139 (151)
T 1sra_A 79 VHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp HHHHHHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred HHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence 68899999997 999999999998886553 5566789999999999999999999998873
No 313
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.16 E-value=7.9e-06 Score=51.37 Aligned_cols=57 Identities=9% Similarity=-0.031 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhc-CC----CCCcccHHHHHHHHH
Q psy8447 91 EILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYD-LN----NDGFITREEMFQLLR 155 (229)
Q Consensus 91 ~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D-~~----~~G~I~~~e~~~~l~ 155 (229)
.+.+..+|+.| ++++|.|+..++.. ..+.+.+..+++..| .+ ++|.|++++|.+++.
T Consensus 9 ~eel~eAFr~f-~dg~G~It~~eLr~-------~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 9 AEQVIASFRIL-ASDKPYILAEELRR-------ELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 70 (75)
T ss_dssp HHHHHHHHHHH-TTSCSSBCHHHHHH-------HSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred HHHHHHHHHHH-hcCCCCcCHHHHHh-------cCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHh
Confidence 34478899999 99999999999998 266789999999999 56 589999999988763
No 314
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=98.13 E-value=4.7e-07 Score=69.59 Aligned_cols=65 Identities=15% Similarity=0.226 Sum_probs=53.5
Q ss_pred HHHHHHHHHhcC-CCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 128 ELIKFTFLIYDL-NNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 128 ~~~~~~F~~~D~-~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..+.++|..+|. |++|+|+..|+..++..+.. .+..+..+|+..|.|+||.||++||..++...+
T Consensus 155 ~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~~-----------~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~~~~ 220 (229)
T 1nub_A 155 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIP-----------MEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQ 220 (229)
T ss_dssp HHHHHHHHHHTTTTCSSEECTTTTGGGGSTTST-----------TGGGHHHHHHHHCTTCSSCEEHHHHHHHTTCCG
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhh-----------HHHHHHHHHHHcCCCCCCcCCHHHHHHHhCCCc
Confidence 468899999999 89999999999998754310 112368899999999999999999999887554
No 315
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.93 E-value=0.0001 Score=50.32 Aligned_cols=87 Identities=10% Similarity=0.107 Sum_probs=64.3
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHH-c-----cCCCCceeHHHHHHHHHhhcc-C-ChHHHHHHHHHHhcCCC--
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAF-D-----RLCDGVIHLDEWVLGLSCFLR-G-TNEELIKFTFLIYDLNN-- 141 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~-d-----~~~~g~I~~~ef~~~~~~~~~-~-~~~~~~~~~F~~~D~~~-- 141 (229)
+++++|.++-.... .+..+ ++.+++.| | ...+|.|++++|..++..... + .+..-+..+|..||.++
T Consensus 8 lspe~l~~L~~~t~--fs~~e-lk~~y~~F~~g~~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF~~Fd~~~~~ 84 (118)
T 1tuz_A 8 ISPSDFAQLQKYME--YSTKK-VSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCL 84 (118)
T ss_dssp SCHHHHHHHHHHHH--HCCCC-HHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCT
T ss_pred CCHHHHHHHHHHcc--cCHHH-HHHHHHHHccccccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHHHHHhccccc
Confidence 67777766655432 12223 45666666 2 345799999999999999875 3 67788889999999985
Q ss_pred ------CCcccHHHHHHHHHHHhhcC
Q psy8447 142 ------DGFITREEMFQLLRNSLISH 161 (229)
Q Consensus 142 ------~G~I~~~e~~~~l~~~~~~~ 161 (229)
+|.|+..||..+|.-+..+.
T Consensus 85 ~~~~~~~g~I~fkefi~~LSll~rG~ 110 (118)
T 1tuz_A 85 NETNVTKDVVCLNDVSCYFSLLEGGR 110 (118)
T ss_dssp TCCCCCSCCEEHHHHHHHHHHHHSCC
T ss_pred ccccCCCCeEeHHHHHHHHHHhcCCC
Confidence 89999999999997654333
No 316
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=97.44 E-value=4.9e-05 Score=58.32 Aligned_cols=61 Identities=21% Similarity=0.212 Sum_probs=52.2
Q ss_pred HHHHHHHHHcc-CCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 93 LMERIFCAFDR-LCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 93 ~~~~lf~~~d~-~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
.+..+|..+|. |+||.|+..|+..+...+. ..+.-+..+|+..|.|+||.||.+||...+.
T Consensus 156 ~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~--~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~ 217 (229)
T 1nub_A 156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 217 (229)
T ss_dssp HHHHHHHHHTTTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh--hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhC
Confidence 47889999999 8999999999999876543 2445578999999999999999999998874
No 317
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=95.26 E-value=0.12 Score=35.28 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=45.4
Q ss_pred CChhHHHHHHhccCccCCC---CCCHHHHHHHHhhhcC----CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc
Q psy8447 52 LPPSNVTERYKGFSPFSFQ---GLDRVVFRELLHNTFD----LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL 122 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~---~i~~~ef~~~l~~~~~----~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~ 122 (229)
-...+++.++..|..+... .|+-..|..+++.... ..+..+ +..+|..+ ..+..+|+|++|+.++..+.
T Consensus 19 ~~~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~Td-vDIiF~Kv-~k~~r~I~f~qF~~aL~~lA 94 (125)
T 1pul_A 19 WDDADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTM-TGIAFSKV-TGPKKKATFDETKKVLAFVA 94 (125)
T ss_dssp CCHHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHH-HHHHHHHH-TCSSSCCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccc-cceeehcc-cCCcceecHHHHHHHHHHHH
Confidence 3445566666665555332 2777788888777533 234455 67788888 66667888888888887653
No 318
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=94.67 E-value=0.11 Score=33.16 Aligned_cols=54 Identities=22% Similarity=0.314 Sum_probs=38.4
Q ss_pred HhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy8447 136 IYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQS 198 (229)
Q Consensus 136 ~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~ 198 (229)
.=|.|++|.|+..++.-+.+.+........ + ..-+...|.|+||.|+-.|+..+
T Consensus 22 ~GDvNgDG~Vn~~D~~llk~yllg~~~~~~-~--------~~~~~aADvNgDG~In~~D~~~l 75 (88)
T 4fl4_A 22 MGDVNDDGKVNSTDLTLLKRYVLKAVSTLP-S--------SKAEKNADVNRDGRVNSSDVTIL 75 (88)
T ss_dssp TTCTTCSSCCSHHHHHHHHHHHHTSSCCCS-S--------HHHHHHHCTTCSSCCSHHHHHHH
T ss_pred cccCCCCCcCCHHHHHHHHHHHcCCCCCCc-h--------hhhhhhccccCCCCcCHHHHHHH
Confidence 348999999999999888776654322111 1 12356789999999999998763
No 319
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=94.51 E-value=0.079 Score=45.90 Aligned_cols=67 Identities=13% Similarity=0.162 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChH
Q psy8447 126 NEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPL 204 (229)
Q Consensus 126 ~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~ 204 (229)
...+...+|...|.. +|+|+.++.+.++.+.+ .+ .+.+.+++...|.++||.++.+||.-+|.-...
T Consensus 456 ~~~~y~~~F~~~~~~-~g~i~g~~a~~~~~~s~--Lp---------~~~L~~IW~l~D~~~~g~L~~~eF~~am~Li~~ 522 (550)
T 2qpt_A 456 DKSKYDEIFYNLAPA-DGKLSGSKAKTWMVGTK--LP---------NSVLGRIWKLSDVDRDGMLDDEEFALASHLIEA 522 (550)
T ss_dssp THHHHHHHHHHTCCS-SSEECHHHHHHHHHHTT--CC---------HHHHHHHHHHHCSSCSSSEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-CCeecHHHHHHHHHHcC--CC---------HHHHHHHhcccCCCCCCcCCHHHHHHHHHHHHH
Confidence 456788999999965 69999999999997643 21 224888999999999999999999998864433
No 320
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=94.03 E-value=0.14 Score=44.36 Aligned_cols=62 Identities=15% Similarity=0.168 Sum_probs=53.1
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 92 ILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 92 ~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
..-..+|...|.. +|.|+-.+-..++.. .+.+.+.+..+|.+.|.+++|.++.+||.-+|.-
T Consensus 458 ~~y~~~F~~~~~~-~g~i~g~~a~~~~~~--s~Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~L 519 (550)
T 2qpt_A 458 SKYDEIFYNLAPA-DGKLSGSKAKTWMVG--TKLPNSVLGRIWKLSDVDRDGMLDDEEFALASHL 519 (550)
T ss_dssp HHHHHHHHHTCCS-SSEECHHHHHHHHHH--TTCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHhcCCC-CCeecHHHHHHHHHH--cCCCHHHHHHHhcccCCCCCCcCCHHHHHHHHHH
Confidence 3357789999864 599999999888864 4688899999999999999999999999998863
No 321
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=93.85 E-value=0.09 Score=33.15 Aligned_cols=52 Identities=21% Similarity=0.155 Sum_probs=37.4
Q ss_pred cCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy8447 138 DLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQS 198 (229)
Q Consensus 138 D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~ 198 (229)
|.|++|.|+..++.-+.+.+........ +. .-....|.|+||.|+-.++..+
T Consensus 9 DvN~DG~Vn~~D~~llk~yllg~~~~~~-~~--------~~~~~ADvngDG~In~~D~~~l 60 (82)
T 4dh2_B 9 DVNADGVVNISDYVLMKRYILRIIADFP-AD--------DDMWVGDVNGDNVINDIDCNYL 60 (82)
T ss_dssp CTTCSSSCSHHHHHHHHHHHTTSSSSCS-SS--------CHHHHHCSSSSSCCSHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccCc-cc--------cchhheeccCCCcCCHHHHHHH
Confidence 8899999999999888876654321111 11 1245779999999999998763
No 322
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=93.69 E-value=0.11 Score=33.23 Aligned_cols=60 Identities=18% Similarity=0.084 Sum_probs=41.8
Q ss_pred HHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh
Q psy8447 100 AFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI 159 (229)
Q Consensus 100 ~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~ 159 (229)
.=|.|++|.|+-.++..+...+................|.|++|.|+..++..+-+.+.+
T Consensus 22 ~GDvNgDG~Vn~~D~~llk~yllg~~~~~~~~~~~~aADvNgDG~In~~D~~~lkkyLLG 81 (88)
T 4fl4_A 22 MGDVNDDGKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADVNRDGRVNSSDVTILSRYLIR 81 (88)
T ss_dssp TTCTTCSSCCSHHHHHHHHHHHHTSSCCCSSHHHHHHHCTTCSSCCSHHHHHHHHHHHTT
T ss_pred cccCCCCCcCCHHHHHHHHHHHcCCCCCCchhhhhhhccccCCCCcCHHHHHHHHHHHhC
Confidence 347899999999999887777654322100012345789999999999999777665543
No 323
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=92.75 E-value=0.95 Score=31.87 Aligned_cols=58 Identities=17% Similarity=0.135 Sum_probs=30.6
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLR 155 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~ 155 (229)
+..+++.+|.|.+|.|+..|--.+++.-........-. + .|+ .++..||.+|+-..+.
T Consensus 17 i~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~~k~--~-~~h-~~D~~Isv~eLw~~W~ 74 (150)
T 2l5y_A 17 LQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKH--S-HLH-REDKHITIEDLWKRWK 74 (150)
T ss_dssp HHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSHHHH--H-HHT-TTCCCBCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCchhHH--h-hhc-CCCCeeeHHHHHHHHc
Confidence 45566666777777777776666666543311111111 1 222 2346667666666554
No 324
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=92.01 E-value=0.14 Score=32.31 Aligned_cols=58 Identities=26% Similarity=0.264 Sum_probs=41.1
Q ss_pred ccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh
Q psy8447 102 DRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI 159 (229)
Q Consensus 102 d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~ 159 (229)
|.|++|.|+-.++..+...+......-.........|.|++|.|+..++..+-+.+.+
T Consensus 9 DvN~DG~Vn~~D~~llk~yllg~~~~~~~~~~~~~ADvngDG~In~~D~~~lk~yllg 66 (82)
T 4dh2_B 9 DVNADGVVNISDYVLMKRYILRIIADFPADDDMWVGDVNGDNVINDIDCNYLKRYLLH 66 (82)
T ss_dssp CTTCSSSCSHHHHHHHHHHHTTSSSSCSSSCHHHHHCSSSSSCCSHHHHHHHHHHHTT
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccCccccchhheeccCCCcCCHHHHHHHHHHHhC
Confidence 6789999999999888877654321100011245779999999999999877766554
No 325
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=91.22 E-value=2.2 Score=30.06 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=48.1
Q ss_pred hHHHHHHhccCccCCC-----CCCHHHHHHHHhhhcC----CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc
Q psy8447 55 SNVTERYKGFSPFSFQ-----GLDRVVFRELLHNTFD----LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL 122 (229)
Q Consensus 55 ~~~~~l~~~f~~~d~~-----~i~~~ef~~~l~~~~~----~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~ 122 (229)
.++..++..|-.+... .|+-..|..+++.... ..+..+ +..+|..+-..+..+|+|++|+.+|..+.
T Consensus 15 ~~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~td-vDiiF~KvK~k~~rkI~f~qF~~aL~~lA 90 (151)
T 1wlm_A 15 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTD-VDIVFSKVKAKSARVINYEEFKKALEELA 90 (151)
T ss_dssp CSHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHH-HHHHHHHHSCSSCSEEEHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhh-cceehheeccCccceecHHHHHHHHHHHH
Confidence 3466666666665331 2888889888888633 234455 68899998766778999999999998763
No 326
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=90.86 E-value=0.56 Score=32.21 Aligned_cols=64 Identities=16% Similarity=0.109 Sum_probs=42.1
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCC--CCCcccHHHHHHHHhc
Q psy8447 130 IKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYD--KDGKISFQDFQQSVTD 201 (229)
Q Consensus 130 ~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~dg~Is~~ef~~~~~~ 201 (229)
...+|..||.+++|+|.+.++..++..+..-..... +.. . .+..+|.. .+++|.+.+.+.++.+
T Consensus 45 F~~~W~~fDP~aTg~I~~~~L~~ll~~L~pPLgi~k--pnr----~--~L~~mniPl~~g~~Vhf~dvL~ALtr 110 (129)
T 2kav_A 45 FYEVWEKFDPDATQFIEFAKLSDFADALDPPLLIAK--PNK----V--QLIAMDLPMVSGDRIHCLDILFAFTK 110 (129)
T ss_dssp HHHHHHHHCTTCCCEECGGGHHHHHHHSCTTSCCCT--TCC----H--HHHHTCCCEETTTEEEHHHHHHHHHH
T ss_pred HHHHHHhcCCCCceEEeHHHHHHHHHhCCccccCCC--ccH----H--HHHHcCCccCCCCEEeHHHHHHHHHH
Confidence 345778999999999999999999988642111111 111 1 13355532 5568999988877654
No 327
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=90.76 E-value=0.58 Score=27.69 Aligned_cols=50 Identities=30% Similarity=0.349 Sum_probs=36.0
Q ss_pred cCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy8447 138 DLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQS 198 (229)
Q Consensus 138 D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~ 198 (229)
|.|++|.|+..++.-+-+.+..... .+ ..-+...|.|+||.|+-.+|..+
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~---~~--------~~~~~~aDvn~DG~in~~D~~~l 55 (63)
T 2ccl_B 6 DVNGDGTINSTDLTMLKRSVLRAIT---LT--------DDAKARADVDKNGSINAADVLLL 55 (63)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSC---CC--------HHHHHHHCTTCSSCCSHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCc---cc--------cchhhhhccCCCCCccHHHHHHH
Confidence 7899999999999777655543221 11 11256789999999999988754
No 328
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=90.50 E-value=0.56 Score=28.03 Aligned_cols=49 Identities=29% Similarity=0.388 Sum_probs=36.2
Q ss_pred cCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy8447 138 DLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQS 198 (229)
Q Consensus 138 D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~ 198 (229)
|.|++|.|+..++.-+-+.+..... . + .. ....|.|+||.|+-.++..+
T Consensus 7 DvN~DG~Vn~~D~~llk~yllg~~~-~--~-------~~--~~~ADvn~DG~In~~D~~~l 55 (65)
T 3ul4_B 7 DLNRNGIVNDEDYILLKNYLLRGNK-L--V-------ID--LNVADVNKDGKVNSTDCLFL 55 (65)
T ss_dssp CTTCSSCCSHHHHHHHHHHHTTCSS-C--C-------CC--GGGCCTTCSSCCSHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHCCCCC-C--c-------hH--HHhccccCCCCCCHHHHHHH
Confidence 7899999999999888776654211 1 1 01 46789999999999988653
No 329
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=89.50 E-value=0.74 Score=27.98 Aligned_cols=54 Identities=28% Similarity=0.345 Sum_probs=38.1
Q ss_pred ccCCCCceeHHHHHHHHHhh--ccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhc
Q psy8447 102 DRLCDGVIHLDEWVLGLSCF--LRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLIS 160 (229)
Q Consensus 102 d~~~~g~I~~~ef~~~~~~~--~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~ 160 (229)
|.|++|.|+-.++..+-..+ ....+. .. ...|.+++|.|+..++..+-+.+.+.
T Consensus 8 DvN~DG~vn~~D~~~l~~yl~~lg~~~~--~~---~~aDvN~DG~in~~D~~~l~~~llg~ 63 (71)
T 2y3n_B 8 DLNGDGVINMADVMILAQSFGKAIGNPG--VN---EKADLNNDGVINSDDAIILAQYFGKT 63 (71)
T ss_dssp CTTSSSBCSHHHHHHHHHTTTCBC-----------CTTCTTCSSBCSHHHHHHHHHHTTCB
T ss_pred cCCCCCcCCHHHHHHHHHHHHHhCCCcC--CC---ccccccCCCcccHHHHHHHHHHHcCC
Confidence 67899999999988776655 322221 11 67899999999999998777665443
No 330
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=89.30 E-value=2.2 Score=30.02 Aligned_cols=64 Identities=9% Similarity=0.029 Sum_probs=40.6
Q ss_pred ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhh
Q psy8447 53 PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCF 121 (229)
Q Consensus 53 ~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~ 121 (229)
+-+.+..+...++..+.+.|+..|-..+++.-........ .. ..|+. ++..||-+|+...+...
T Consensus 13 ~~eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~~-k~---~~~h~-~D~~Isv~eLw~~W~~s 76 (150)
T 2l5y_A 13 SLEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATN-KH---SHLHR-EDKHITIEDLWKRWKTS 76 (150)
T ss_dssp HHHHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSHH-HH---HHHTT-TCCCBCHHHHHHHHHTS
T ss_pred hHHHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCchh-HH---hhhcC-CCCeeeHHHHHHHHccC
Confidence 3355666667777666666998888888888644222222 11 23333 45789988888877653
No 331
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=89.20 E-value=3.7 Score=30.39 Aligned_cols=69 Identities=7% Similarity=-0.017 Sum_probs=44.8
Q ss_pred hhHHHHHHhccCccC-CCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc
Q psy8447 54 PSNVTERYKGFSPFS-FQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR 123 (229)
Q Consensus 54 ~~~~~~l~~~f~~~d-~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~ 123 (229)
...+..+++.|...+ .+.|+.+.+..++..++..+..-.. -.+-..+....-|.|+.+||+.++..+.-
T Consensus 3 ~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~-Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~ 72 (200)
T 3tdu_A 3 RKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISV-LIIAWKFRAATQCEFSKQEFMDGMTELGC 72 (200)
T ss_dssp HHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHH-HHHHHHTTCSSTTCEEHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHH-HHHHHHcCCCccCccCHHHHHHHHHHHcc
Confidence 345666666666433 2348888888888888765544332 22334455556788999999988888644
No 332
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=88.90 E-value=1.3 Score=26.06 Aligned_cols=54 Identities=20% Similarity=0.195 Sum_probs=37.9
Q ss_pred ccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHH
Q psy8447 102 DRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNS 157 (229)
Q Consensus 102 d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~ 157 (229)
|.|++|.|+-.+|..+-..+....+.. ..-....|.+++|.|+..++..+-+.+
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~--~~~~~~aDvn~DG~in~~D~~~l~~~l 59 (63)
T 2ccl_B 6 DVNGDGTINSTDLTMLKRSVLRAITLT--DDAKARADVDKNGSINAADVLLLSRYL 59 (63)
T ss_dssp CTTCSSSCCHHHHHHHHHHHTTSSCCC--HHHHHHHCTTCSSCCSHHHHHHHHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHHcCCCccc--cchhhhhccCCCCCccHHHHHHHHHHH
Confidence 678999999999877665554322211 122467899999999999987766544
No 333
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=88.83 E-value=1.6 Score=31.84 Aligned_cols=66 Identities=15% Similarity=0.202 Sum_probs=44.2
Q ss_pred HHHHHHhccCccCCC-----CCCHHHHHHHHhhhcC----CCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhc
Q psy8447 56 NVTERYKGFSPFSFQ-----GLDRVVFRELLHNTFD----LVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFL 122 (229)
Q Consensus 56 ~~~~l~~~f~~~d~~-----~i~~~ef~~~l~~~~~----~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~ 122 (229)
.+..+|..|-.+... .|+-..|..+++.... ..+..+ +..+|..+-..+..+|+|++|+.+|..+.
T Consensus 9 ~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~td-vDIiF~KvK~k~~rkI~feqF~~aL~~lA 83 (184)
T 2jrf_A 9 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTD-VDIVFSKVKGKSARVINYEEFKKALEELA 83 (184)
T ss_dssp HHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHH-HHHHHHHHCCSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhh-cchhhheeccCcceeecHHHHHHHHHHHH
Confidence 344455555444332 1777788888777532 234455 68889998766778899999999887653
No 334
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=88.75 E-value=5.8 Score=29.33 Aligned_cols=137 Identities=12% Similarity=0.072 Sum_probs=76.7
Q ss_pred CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHH---
Q psy8447 52 LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE--- 128 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~--- 128 (229)
++...+..+++.|...+.+.|+.+.+..++..++..+..-.. -.+--.+....-|.|+.+||+.++..+.-.+...
T Consensus 4 ~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~-LvLaw~l~a~~~g~ftr~ef~~G~~~l~~dsi~~lk~ 82 (199)
T 3kev_A 4 ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVT-LVLAWKLKASSTCEFSEKEFVEGLANLQVDSLEKLKR 82 (199)
T ss_dssp CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHH-HHHHHHTTCCSTTCEEHHHHHHHHHHTTCCSHHHHHH
T ss_pred cCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHH-HHHHHHcCCCccCcccHHHHHHHHHHhCCCCHHHHHH
Confidence 455666777777764433358888888888887765544332 2233345555678888888888888765433221
Q ss_pred -----------------HHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCccc
Q psy8447 129 -----------------LIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKIS 191 (229)
Q Consensus 129 -----------------~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is 191 (229)
--+.+|...=..+.-.|+.+--..+++-++...- ..+..+++-+.... ..||
T Consensus 83 ~l~~l~~~l~d~~~Fk~~Y~ftF~~~re~gqk~L~~e~Ai~~W~lll~~~~----------~~l~~W~~FL~~~~-k~Is 151 (199)
T 3kev_A 83 KLSSLRKEIEDPSKFRAFYQFVFQYSKEPSQRSLPAETAMALWDVLLRGRF----------SLLDSWLEFLKNNT-HSIS 151 (199)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHHHHSCTTCSSBCHHHHHHHHHHHHTTTC----------TTHHHHHHHGGGCC-SCBC
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHcCcCcCCCCHHHHHHHHHHHhCCcc----------HHHHHHHHHHHhcC-CCcC
Confidence 1223444442234445666666666654442110 02444444444344 6688
Q ss_pred HHHHHHHHh
Q psy8447 192 FQDFQQSVT 200 (229)
Q Consensus 192 ~~ef~~~~~ 200 (229)
.+-|..++.
T Consensus 152 kD~W~~~l~ 160 (199)
T 3kev_A 152 RDTWNLLYD 160 (199)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777554
No 335
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=87.79 E-value=0.91 Score=31.13 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=50.0
Q ss_pred HHHHhccCccCCC---CCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccC----ChHHHH
Q psy8447 58 TERYKGFSPFSFQ---GLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRG----TNEELI 130 (229)
Q Consensus 58 ~~l~~~f~~~d~~---~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~----~~~~~~ 130 (229)
.-+.+.|...... .+++.+|..+.. +|..||+++.|.|.+.++..++..+..+ .+. +.
T Consensus 20 AVIlenF~~~~~~~~~~l~~~dl~~F~~--------------~W~~fDP~aTg~I~~~~L~~ll~~L~pPLgi~kpn-r~ 84 (129)
T 2kav_A 20 HMASENFSVATEESAEPLSEDDFEMFYE--------------VWEKFDPDATQFIEFAKLSDFADALDPPLLIAKPN-KV 84 (129)
T ss_dssp ----CCSCCTTSSCSCSSCHHHHHHHHH--------------HHHHHCTTCCCEECGGGHHHHHHHSCTTSCCCTTC-CH
T ss_pred eeeeccHHHHHHhhccCCCHHHHHHHHH--------------HHHhcCCCCceEEeHHHHHHHHHhCCccccCCCcc-HH
Confidence 3345555543322 278777777644 6788999999999999999999887643 111 11
Q ss_pred HHHHHHhcCC--CCCcccHHHHHHHHHHH
Q psy8447 131 KFTFLIYDLN--NDGFITREEMFQLLRNS 157 (229)
Q Consensus 131 ~~~F~~~D~~--~~G~I~~~e~~~~l~~~ 157 (229)
..-.+|.- .+|+|..-++..+|...
T Consensus 85 --~L~~mniPl~~g~~Vhf~dvL~ALtr~ 111 (129)
T 2kav_A 85 --QLIAMDLPMVSGDRIHCLDILFAFTKR 111 (129)
T ss_dssp --HHHHTCCCEETTTEEEHHHHHHHHHHH
T ss_pred --HHHHcCCccCCCCEEeHHHHHHHHHHH
Confidence 12233333 44678877777666543
No 336
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=87.46 E-value=1.9 Score=25.50 Aligned_cols=47 Identities=19% Similarity=0.291 Sum_probs=33.8
Q ss_pred cCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy8447 138 DLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQS 198 (229)
Q Consensus 138 D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~ 198 (229)
|.+++|.|+..++.-+-+.+...... . . ...|.|+||.|+--+|..+
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~---~--------~---~~aDvn~DG~in~~D~~~l 52 (64)
T 2vn6_B 6 DYNNDGNVDSTDFAGLKKYIMAADHA---Y--------V---KNLDVNLDNEVNAFDLAIL 52 (64)
T ss_dssp CTTSSSCCSHHHHHHHHHHHHSTTCC---C--------C---GGGCTTCSSCCSHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHccCCcc---c--------h---hhhcccCCCcccHHHHHHH
Confidence 78999999999987776555432211 0 1 5679999999998888653
No 337
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=87.24 E-value=0.8 Score=27.16 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=37.0
Q ss_pred ccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh
Q psy8447 102 DRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI 159 (229)
Q Consensus 102 d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~ 159 (229)
|.|++|.|+-.+|..+-..+........ ...|.+++|.|+..++..+-+.+.+
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~~-----~~aDvn~DG~in~~D~~~l~~~llg 58 (64)
T 2vn6_B 6 DYNNDGNVDSTDFAGLKKYIMAADHAYV-----KNLDVNLDNEVNAFDLAILKKYLLG 58 (64)
T ss_dssp CTTSSSCCSHHHHHHHHHHHHSTTCCCC-----GGGCTTCSSCCSHHHHHHHHHHHTT
T ss_pred cCCCCCcCCHHHHHHHHHHHccCCccch-----hhhcccCCCcccHHHHHHHHHHHcC
Confidence 6788999999888776554433211100 5789999999999999777655543
No 338
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=86.68 E-value=4.4 Score=29.95 Aligned_cols=64 Identities=8% Similarity=0.064 Sum_probs=39.1
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE-ELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~-~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
+..+|..+-...+..|+-+-...++.-+.-...+ .-+-.++. +....-|.||++||..-+..++
T Consensus 9 l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~-l~a~~~g~ftr~ef~~G~~~l~ 73 (199)
T 3kev_A 9 ILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWK-LKASSTCEFSEKEFVEGLANLQ 73 (199)
T ss_dssp HHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHH-TTCCSTTCEEHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHH-cCCCccCcccHHHHHHHHHHhC
Confidence 5677777643222378888777777776544332 23333443 3445568888888888777764
No 339
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=86.41 E-value=1.6 Score=31.40 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=35.9
Q ss_pred HHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCC--CCCCcccHHHHHHHHh
Q psy8447 132 FTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDY--DKDGKISFQDFQQSVT 200 (229)
Q Consensus 132 ~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~dg~Is~~ef~~~~~ 200 (229)
.+|..||.+++|+|.+.++..++..+-.-..-.. +. +..+..+|. ..+|.|-+.+-+.++.
T Consensus 24 ~~W~~fDP~ATgfI~~~~L~~~l~~L~pPLg~~k--Pn------~~~L~~mdiPl~~~~~Vhf~dvL~ALt 86 (168)
T 4dck_A 24 EIWEKFDPEATQFIEYSVLSDFADALSEPLRIAK--PN------QISLINMDLPMVSGDRIHCMDILFAFT 86 (168)
T ss_dssp HHHHHHCTTCCSEEEGGGHHHHHHHSCTTTCCCS--SC------HHHHHHSCCEEETTTEEEHHHHHHHHH
T ss_pred HHHHHhCCCCcceeeHHHHHHHHHhcCCCCcCCC--CC------HHHHHHcCCCcCCCCEEeHHHHHHHHH
Confidence 4666778888888888888888876532111000 11 112455553 4567787777776664
No 340
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=85.67 E-value=2.3 Score=31.56 Aligned_cols=65 Identities=6% Similarity=0.079 Sum_probs=42.2
Q ss_pred HHHHHHHHc-cCCCCceeHHHHHHHHHhhccCChH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh
Q psy8447 94 MERIFCAFD-RLCDGVIHLDEWVLGLSCFLRGTNE-ELIKFTFLIYDLNNDGFITREEMFQLLRNSLI 159 (229)
Q Consensus 94 ~~~lf~~~d-~~~~g~I~~~ef~~~~~~~~~~~~~-~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~ 159 (229)
+..+|..+- .+..+.|+-+-...++.-+.-...+ .-+-.++.+ ....-|.||++||..-+..++.
T Consensus 6 l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l-~a~~~g~ftr~ef~~G~~~l~~ 72 (200)
T 3tdu_A 6 LEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKF-RAATQCEFSKQEFMDGMTELGC 72 (200)
T ss_dssp HHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHT-TCSSTTCEEHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHc-CCCccCccCHHHHHHHHHHHcc
Confidence 567777763 3334678888888888777644332 333344433 4455788888888888887753
No 341
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=84.84 E-value=6.9 Score=26.55 Aligned_cols=65 Identities=11% Similarity=-0.019 Sum_probs=49.1
Q ss_pred HHHHHHHHc---cCCCCceeHHHHHHHHHhhc----cCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh
Q psy8447 94 MERIFCAFD---RLCDGVIHLDEWVLGLSCFL----RGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI 159 (229)
Q Consensus 94 ~~~lf~~~d---~~~~g~I~~~ef~~~~~~~~----~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~ 159 (229)
++.+|..|- ..+...++-..|..++.--. ...+...+..+|..+ ..+...|++++|..+|..+..
T Consensus 24 L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA~ 95 (125)
T 1pul_A 24 VKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVAE 95 (125)
T ss_dssp HHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHHHH
Confidence 455555543 33446899999998887632 456778899999999 888899999999999988643
No 342
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=84.11 E-value=1 Score=26.84 Aligned_cols=54 Identities=24% Similarity=0.409 Sum_probs=39.4
Q ss_pred ccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 102 DRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 102 d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
|.|++|.|+-.++..+-..+...... .. . ....|.|++|.|+..++..+-+.+.
T Consensus 7 DvN~DG~Vn~~D~~llk~yllg~~~~-~~-~-~~~ADvn~DG~In~~D~~~lk~yll 60 (65)
T 3ul4_B 7 DLNRNGIVNDEDYILLKNYLLRGNKL-VI-D-LNVADVNKDGKVNSTDCLFLKKYIL 60 (65)
T ss_dssp CTTCSSCCSHHHHHHHHHHHTTCSSC-CC-C-GGGCCTTCSSCCSHHHHHHHHHHHT
T ss_pred cCCCCCcCCHHHHHHHHHHHCCCCCC-ch-H-HHhccccCCCCCCHHHHHHHHHHHh
Confidence 67899999999998877776543211 01 1 5678999999999999877665443
No 343
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=83.69 E-value=3.7 Score=30.88 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=39.3
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNE-ELIKFTFLIYDLNNDGFITREEMFQLLRNSLI 159 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~-~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~ 159 (229)
+..+|..+-....+.|+-+-...++.-+.-...+ .-+-.++.+ ....-|.||++||..-+..++.
T Consensus 8 l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l-~A~~mg~ftr~eF~~G~~~l~~ 73 (221)
T 4gba_A 8 LEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKF-QAATMCKFTRKEFFDGCKAISA 73 (221)
T ss_dssp HHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHT-TCCSTTCEEHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHh-CCCccCcCcHHHHHHHHHHhCc
Confidence 5667766643344578877777777776544332 233334433 4445678888888887777643
No 344
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=83.27 E-value=1.2 Score=26.99 Aligned_cols=47 Identities=34% Similarity=0.488 Sum_probs=32.9
Q ss_pred cCCCCCcccHHHHHHHHHHH--hhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy8447 138 DLNNDGFITREEMFQLLRNS--LISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQS 198 (229)
Q Consensus 138 D~~~~G~I~~~e~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~ 198 (229)
|.|++|.|+..++..+-+.+ ....+ . .. ...|.|+||.|+-.+|..+
T Consensus 8 DvN~DG~vn~~D~~~l~~yl~~lg~~~--~---------~~---~~aDvN~DG~in~~D~~~l 56 (71)
T 2y3n_B 8 DLNGDGVINMADVMILAQSFGKAIGNP--G---------VN---EKADLNNDGVINSDDAIIL 56 (71)
T ss_dssp CTTSSSBCSHHHHHHHHHTTTCBC--------------------CTTCTTCSSBCSHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHHHhCCCc--C---------CC---ccccccCCCcccHHHHHHH
Confidence 78999999999987775443 21110 0 11 6779999999999988764
No 345
>2ecc_A Homeobox and leucine zipper protein homez; homeobox domain, transcription factor, leucine zipper- containing factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=83.19 E-value=1.6 Score=26.88 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=37.6
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-+.||.+++..|...|..- .. |...+-..++..++|++.+|..|+..
T Consensus 7 r~kfT~~Ql~~Le~~F~~~-----~Y--Ps~~er~~LA~~tgLte~qIkvWFqN 53 (76)
T 2ecc_A 7 GKRKTKEQLAILKSFFLQC-----QW--ARREDYQKLEQITGLPRPEIIQWFGD 53 (76)
T ss_dssp CCCCCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHC-----CC--CCHHHHHHHHHHHCcCHHHhhHHhHh
Confidence 3678999999999999832 22 55677888999999999999988743
No 346
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=83.02 E-value=1.5 Score=30.82 Aligned_cols=58 Identities=16% Similarity=0.139 Sum_probs=33.9
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccC-ChHHHHHHHHHHhcCCCCCcccHHHHHHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRG-TNEELIKFTFLIYDLNNDGFITREEMFQLLRN 156 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~-~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~ 156 (229)
+..+++.+|.|.+|.|+-.|=-.+++.-... ....+ .. .|.. ++..||.+|+-..+..
T Consensus 17 i~~lH~~lDdD~dG~Id~~Es~~flredl~~~d~~~~-~~---~fh~-~D~~Isv~eLw~~W~~ 75 (150)
T 2k60_A 17 VRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVK-HS---TFHG-EDKLISVEDLWKAWKS 75 (150)
T ss_dssp HHHHHHTTCTTCSSEECTTTTTTHHHHHTTSSCTHHH-HH---HHTS-SSCCEEHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCcccHHHHHHHHHHHhccccchhh-hh---cccC-CCCeeeHHHHHHHhcc
Confidence 5667777777777777777755555553322 22222 22 3332 4667777777776653
No 347
>3a03_A T-cell leukemia homeobox protein 2; homeodomain, developmental protein, DNA-binding, N gene regulation; 1.54A {Homo sapiens}
Probab=83.01 E-value=1.3 Score=25.21 Aligned_cols=45 Identities=13% Similarity=0.132 Sum_probs=34.3
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
|.||.+++..|...|..- . . |...+-..++..+++++..|..|+.
T Consensus 2 T~ft~~Ql~~Le~~F~~~---~--y--p~~~~r~~LA~~l~l~~~qV~~WFq 46 (56)
T 3a03_A 2 TSFSRSQVLELERRFLRQ---K--Y--LASAERAALAKALRMTDAQVKTWFQ 46 (56)
T ss_dssp --CCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHhc---C--C--cCHHHHHHHHHHhCcCHHHhhHhhH
Confidence 678999999999999742 1 2 5556677889999999999988864
No 348
>1daq_A Endoglucanase SS, CELS; cellulose degradation, cellulosome, calcium-binding, hydrolase; NMR {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1dav_A
Probab=82.97 E-value=1.2 Score=27.08 Aligned_cols=48 Identities=25% Similarity=0.344 Sum_probs=33.6
Q ss_pred cCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy8447 138 DLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQS 198 (229)
Q Consensus 138 D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~ 198 (229)
|.+++|.|+..++.-+-+.+....... -+...|.|+||.|+-.+|..+
T Consensus 8 DvN~Dg~vn~~D~~~l~~yllg~~~~~-------------~~~~aDvn~DG~in~~D~~~l 55 (71)
T 1daq_A 8 DVNDDGKVNSTDAVALKRYVLRSGISI-------------NTDNADLNEDGRVNSTDLGIL 55 (71)
T ss_dssp CSSSSSCSSGGGHHHHHHHHHCSCSCC-------------CGGGTCSSSSSSCSSHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHcCCCccc-------------cchhhcccCCCcccHHHHHHH
Confidence 788999999999877755544322110 035678999999988887653
No 349
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=82.97 E-value=6.8 Score=28.49 Aligned_cols=68 Identities=10% Similarity=0.263 Sum_probs=47.5
Q ss_pred HHHHHHHHHhcCCCCC-----cccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 128 ELIKFTFLIYDLNNDG-----FITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 128 ~~~~~~F~~~D~~~~G-----~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
..+..+|..|-.-+++ .++-..|..+++....- ....++... +..+|..+-..+...|+|++|+.+|.
T Consensus 8 ~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~li-Dgk~~T~td----vDIiF~KvK~k~~rkI~feqF~~aL~ 80 (184)
T 2jrf_A 8 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVA-DGKSVTGTD----VDIVFSKVKGKSARVINYEEFKKALE 80 (184)
T ss_dssp SHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCC-CSSSSCHHH----HHHHHHHHCCSCCSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCc-cCCCCChhh----cchhhheeccCcceeecHHHHHHHHH
Confidence 3567777777664443 58889999999886321 113444443 67788888666677899999999875
No 350
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=82.91 E-value=0.84 Score=36.24 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=39.6
Q ss_pred hcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHh
Q psy8447 137 YDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVT 200 (229)
Q Consensus 137 ~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~ 200 (229)
-|.++||.|+..++..+.+.++....... ..+..|.|.||.|+.+|..-+.+
T Consensus 250 GDvn~D~~i~i~D~~~i~~~~~~~~~~~~------------~~~~~DlN~DG~in~~Di~~v~k 301 (321)
T 3kcp_A 250 GDIVKDNSINLLDVAEVIRCFNATKGSAN------------YVEELDINRNGAINMQDIMIVHK 301 (321)
T ss_dssp EECSSSSBCCHHHHHHHHTTTTCBTTSTT------------CCGGGCTTCSSBCSHHHHHHHHT
T ss_pred ccccCCCcccHHHHHHHHHHhccccCCcc------------ccccccccccCcccHHHHHHHHH
Confidence 38899999999999999987765322221 23677999999999999876544
No 351
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=82.88 E-value=6.7 Score=27.58 Aligned_cols=68 Identities=10% Similarity=0.287 Sum_probs=46.7
Q ss_pred HHHHHHHHhcCCCC-----CcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 129 LIKFTFLIYDLNND-----GFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 129 ~~~~~F~~~D~~~~-----G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
.+..+|..|-.-|+ ..++-..|..+++....- ....++... +..+|..+-..+...|+|++|+.+|..
T Consensus 16 ~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~li-dgk~~T~td----vDiiF~KvK~k~~rkI~f~qF~~aL~~ 88 (151)
T 1wlm_A 16 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVA-DGKAVTGTD----VDIVFSKVKAKSARVINYEEFKKALEE 88 (151)
T ss_dssp SHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCC-CSSSSCHHH----HHHHHHHHSCSSCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCC-cCCCCChhh----cceehheeccCccceecHHHHHHHHHH
Confidence 46677777766443 358888999999875321 113344433 677888876566788999999998764
No 352
>1k61_A Mating-type protein alpha-2; protein-DNA complex, homeodomain, hoogsteen base PAIR, transcription/DNA complex; HET: 5IU; 2.10A {Synthetic} SCOP: a.4.1.1
Probab=82.55 E-value=2.2 Score=24.63 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=37.2
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.||.+++..|...|........ |...+...++..++++..+|..|+.
T Consensus 3 ~~ft~~q~~~Le~~f~~~~~~~y----p~~~~r~~La~~~gl~~~qV~~WFq 50 (60)
T 1k61_A 3 HRFTKENVRILESWFAKNIENPY----LDTKGLENLMKNTSLSRIQIKNWVS 50 (60)
T ss_dssp CSCCHHHHHHHHHHHHHTTTSCC----CCHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHcCCCCC----cCHHHHHHHHHHHCcCHHHHHHHHH
Confidence 56899999999999986432222 5566778899999999999988874
No 353
>1bw5_A ISL-1HD, insulin gene enhancer protein ISL-1; DNA-binding protein, homeodomain, LIM domain; NMR {Rattus norvegicus} SCOP: a.4.1.1
Probab=82.38 E-value=2.2 Score=25.18 Aligned_cols=46 Identities=15% Similarity=0.262 Sum_probs=36.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||.+++..|...|..- +. |...+...++..+++++..|..|+.
T Consensus 7 Rt~ft~~q~~~Le~~F~~~-----~y--p~~~~r~~La~~l~l~~~qV~~WFq 52 (66)
T 1bw5_A 7 RTVLNEKQLHTLRTCYAAN-----PR--PDALMKEQLVEMTGLSPRVIRVWFQ 52 (66)
T ss_dssp CCCCSHHHHHHHHHHHHHC-----SC--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcC-----CC--cCHHHHHHHHHHHCcCHHHHHHHhH
Confidence 3679999999999999751 22 5556677889999999999998874
No 354
>2da1_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=81.74 E-value=3 Score=24.89 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=37.1
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||.+++..|...|..- .. |...+...++..++++...|..|+.
T Consensus 11 Rt~ft~~q~~~Le~~F~~~-----~y--p~~~~r~~LA~~l~l~~~qV~~WFq 56 (70)
T 2da1_A 11 RTRITDDQLRVLRQYFDIN-----NS--PSEEQIKEMADKSGLPQKVIKHWFR 56 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHC-----SS--CCTTHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHC-----CC--CCHHHHHHHHHHhCCCHHHHHHHhh
Confidence 3679999999999999742 12 5566788999999999999998874
No 355
>1yz8_P Pituitary homeobox 2; DNA binding protein, transcription/DNA complex; NMR {Homo sapiens} SCOP: a.4.1.1 PDB: 2l7f_P 2lkx_A* 2l7m_P
Probab=81.05 E-value=3.3 Score=24.54 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=36.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|.. +.. |...+...++..+++++..|..|+.
T Consensus 7 Rt~ft~~Q~~~Le~~F~~-----~~y--p~~~~r~~La~~l~l~~~qV~~WFq 52 (68)
T 1yz8_P 7 RTHFTSQQLQQLEATFQR-----NRY--PDMSTREEIAVWTNLTEARVRVWFK 52 (68)
T ss_dssp CCCCCHHHHHHHHHHHTT-----CSS--CCTTTTTHHHHHTTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHc-----cCC--CCHHHHHHHHHHHCcCHHHHHHHHH
Confidence 367999999999999864 222 5566778999999999999988874
No 356
>2dmu_A Homeobox protein goosecoid; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.78 E-value=2.7 Score=25.15 Aligned_cols=46 Identities=15% Similarity=0.228 Sum_probs=36.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|.. +.. |...+...++..+++++.+|..|+.
T Consensus 11 Rt~ft~~q~~~Le~~F~~-----~~y--p~~~~r~~LA~~l~l~~~qV~~WFq 56 (70)
T 2dmu_A 11 RTIFTDEQLEALENLFQE-----TKY--PDVGTREQLARKVHLREEKVEVWFK 56 (70)
T ss_dssp CCCCCHHHHHHHHHHHHH-----CSS--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHc-----cCC--CCHHHHHHHHHHHCCCHHHeehccc
Confidence 367999999999999975 112 5566778889999999999988874
No 357
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=80.76 E-value=16 Score=27.46 Aligned_cols=70 Identities=9% Similarity=-0.013 Sum_probs=40.7
Q ss_pred ChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhcc
Q psy8447 53 PPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLR 123 (229)
Q Consensus 53 ~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~ 123 (229)
+...+..++..|...+.+.|+.+.+..++..++..+..-.. -.+--.+....-|.|+.++|+.++..+.-
T Consensus 4 ~~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~-LvLAw~l~A~~mg~ftr~eF~~G~~~l~~ 73 (221)
T 4gba_A 4 SLQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRV-LLLAWKFQAATMCKFTRKEFFDGCKAISA 73 (221)
T ss_dssp --CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHH-HHHHHHTTCCSTTCEEHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHH-HHHHHHhCCCccCcCcHHHHHHHHHHhCc
Confidence 34456666766665444457777777777777654443322 22233344455677777777777777543
No 358
>1ig7_A Homeotic protein MSX-1; helix-turn-helix, transcription/DNA complex; 2.20A {Mus musculus} SCOP: a.4.1.1
Probab=80.65 E-value=2.1 Score=24.46 Aligned_cols=45 Identities=9% Similarity=0.034 Sum_probs=36.0
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.||.+++..|...|..- .. |...+...++..+++++.+|..|+.
T Consensus 5 t~ft~~Q~~~Le~~F~~~-----~y--p~~~~r~~La~~l~l~~~qV~~WFq 49 (58)
T 1ig7_A 5 TPFTTAQLLALERKFRQK-----QY--LSIAERAEFSSSLSLTETQVKIWFQ 49 (58)
T ss_dssp CCCCHHHHHHHHHHHHHC-----SC--CCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcC-----CC--cCHHHHHHHHHHHCcCHHHhhhhhh
Confidence 679999999999999742 12 5566677889999999999988874
No 359
>1ahd_P Antennapedia protein mutant; DNA binding protein/DNA; HET: DNA; NMR {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 2hoa_A 1hom_A 1ftz_A
Probab=80.16 E-value=3.7 Score=24.39 Aligned_cols=46 Identities=11% Similarity=-0.022 Sum_probs=36.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..-. . |...+...++..+++++..|..|+.
T Consensus 6 Rt~ft~~Q~~~Le~~F~~~~-----y--p~~~~r~~La~~l~l~~~qV~vWFq 51 (68)
T 1ahd_P 6 RQTYTRYQTLELEKEFHFNR-----Y--LTRRRRIEIAHALSLTERQIKIWFQ 51 (68)
T ss_dssp TCCCCHHHHHHHHHHHHHCS-----S--CCTTHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHccCC-----C--CCHHHHHHHHHHHCcCHhhhhHHhH
Confidence 36799999999999997321 2 5566778899999999999988874
No 360
>2dn0_A Zinc fingers and homeoboxes protein 3; triple homeobox 1 protein, KIAA0395, TIX1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.23 E-value=3.1 Score=25.33 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=36.9
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||.+++..|...|..- .. |...+...++..+++++.+|..|+.
T Consensus 12 R~~ft~~Ql~~Le~~F~~~-----~y--p~~~~r~~La~~~~l~~~qV~~WFq 57 (76)
T 2dn0_A 12 KNKKSHEQLSALKGSFCRN-----QF--PGQSEVEHLTKVTGLSTREVRKWFS 57 (76)
T ss_dssp CCCCCHHHHHHHHHHHHHS-----SS--CCSHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHhcC-----CC--cCHHHHHHHHHHhCCChHHhhHHhH
Confidence 3679999999999999642 12 5566778899999999999998874
No 361
>1jgg_A Segmentation protein EVEN-skipped; homeodomain, protein-DNA complex, transcription/DNA complex; 2.00A {Drosophila melanogaster} SCOP: a.4.1.1
Probab=79.16 E-value=2.3 Score=24.54 Aligned_cols=46 Identities=20% Similarity=0.130 Sum_probs=36.6
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- .. |...+...++..+++++..|..|+.
T Consensus 5 Rt~ft~~Q~~~Le~~F~~~-----~y--p~~~~r~~La~~l~l~~~qV~~WFq 50 (60)
T 1jgg_A 5 RTAFTRDQLGRLEKEFYKE-----NY--VSRPRRCELAAQLNLPESTIKVWFQ 50 (60)
T ss_dssp CCCCCHHHHHHHHHHHHHC-----SC--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHc-----CC--CCHHHHHHHHHHHCcCHHHHHHhhH
Confidence 3679999999999999742 12 5566677899999999999988874
No 362
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=78.78 E-value=21 Score=27.70 Aligned_cols=143 Identities=9% Similarity=0.008 Sum_probs=87.4
Q ss_pred CCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCC-CceeHHHHHHHHHhhccCChHH-
Q psy8447 51 GLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCD-GVIHLDEWVLGLSCFLRGTNEE- 128 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~-g~I~~~ef~~~~~~~~~~~~~~- 128 (229)
......+..++..|. +.+.|+.+.+..++..++..+..-..+- +--.+....- |.++.+||+.++..+.-.+.+.
T Consensus 70 ~~~~~~l~~lF~~Y~--~~d~I~~dG~~~~~~DLgv~ped~~~Lv-la~~l~a~~~~g~ftr~ef~~G~~~l~~dsi~~l 146 (270)
T 3bq3_A 70 PVYPKELTQVFEHYI--NNNLFDIDSLVKFIEELGYNLEDLATLC-LAHLLGYKKLEEPLKREDFLSTWFMQGCSTISDM 146 (270)
T ss_dssp CSSCHHHHHHHHHHC--BTTBCCHHHHHHHHHHHTCCTTCHHHHH-HHHHTTCSCTTSCCCHHHHHHHHHHTTCCSHHHH
T ss_pred cccHHHHHHHHHHhc--CCCccCHhhHHHHHHHcCCChhhHHHHH-HHHHcCCCccCceeeHHHHHHHHHHhCCCCHHHH
Confidence 345677888998887 5556999999999999987654444322 3334454555 9999999999998876543221
Q ss_pred --------------------HHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q psy8447 129 --------------------LIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDG 188 (229)
Q Consensus 129 --------------------~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg 188 (229)
--+.+|...=..|...|+.+--..+++-++...-....+... +..+++-+......
T Consensus 147 k~~l~~l~~~~~~d~~~Fk~~Y~f~F~~~r~~gqk~l~~d~Ai~~W~lll~~~~p~~~~~~~----l~~W~~FL~~~~~k 222 (270)
T 3bq3_A 147 QECIKTLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFFQPEYPVRMEPDL----LEAWFRFLRDEGKT 222 (270)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCTTCSEEEHHHHHHHHHHHTSTTSSCCCCHHH----HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHhcCcCcCcCcHHHHHHHHHHHcCCcccccccchH----HHHHHHHHHhcCCC
Confidence 123455555344566788887777777665432111112222 33333322223346
Q ss_pred cccHHHHHHHHh
Q psy8447 189 KISFQDFQQSVT 200 (229)
Q Consensus 189 ~Is~~ef~~~~~ 200 (229)
.|+.+.|..++.
T Consensus 223 ~IskDtW~~~l~ 234 (270)
T 3bq3_A 223 TISKDTWRMLLL 234 (270)
T ss_dssp EEEHHHHHHHHH
T ss_pred CcCHHHHHHHHH
Confidence 688887777654
No 363
>2hdd_A Protein (engrailed homeodomain Q50K); DNA binding, complex (DNA binding protein/DNA), transcription/DNA complex; HET: DNA; 1.90A {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 1hdd_C* 2jwt_A 3hdd_A 1p7j_A* 1p7i_A* 2hos_A 2hot_A 1du0_A* 1ztr_A 1enh_A 2p81_A
Probab=78.42 E-value=2.6 Score=24.41 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=36.2
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+...++..+++++..|..|+.
T Consensus 7 Rt~ft~~Q~~~Le~~F~~~---~--y--p~~~~r~~La~~l~l~~~qV~~WFq 52 (61)
T 2hdd_A 7 RTAFSSEQLARLKREFNEN---R--Y--LTERRRQQLSSELGLNEAQIKIWFK 52 (61)
T ss_dssp CCCCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHcc---C--C--CCHHHHHHHHHHHCcCHHHHHHHhh
Confidence 3679999999999999642 1 2 5556677889999999999988874
No 364
>2dmn_A Homeobox protein TGIF2LX; TGFB-induced factor 2-like protein, X-linked TGF(beta) induced transcription factor 2-like protein, TGIF-like on the X; NMR {Homo sapiens}
Probab=78.36 E-value=3.3 Score=25.82 Aligned_cols=50 Identities=10% Similarity=0.044 Sum_probs=38.6
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-+.|+...+..|...|........ |+..+-..++..++|+..+|..|+..
T Consensus 11 R~~~s~~q~~~L~~~f~~~~~~pY----Ps~~~r~~LA~~~gLs~~qV~~WFqN 60 (83)
T 2dmn_A 11 KGNLPAESVKILRDWMYKHRFKAY----PSEEEKQMLSEKTNLSLLQISNWFIN 60 (83)
T ss_dssp CSSCCHHHHHHHHHHHHHTTTTCC----CCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHhccCCC----CCHHHHHHHHHHHCcCHHHhhHHhhh
Confidence 367899999999999986543333 55677788999999999999888643
No 365
>3a02_A Homeobox protein aristaless; homeodomain, developmental protein, DNA-binding, N gene regulation; 1.00A {Drosophila melanogaster} PDB: 3lnq_A 3cmy_A
Probab=78.28 E-value=2.4 Score=24.44 Aligned_cols=45 Identities=16% Similarity=0.148 Sum_probs=35.0
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.||.+++..|...|..- . . |...+...++..+++++..|..|+.
T Consensus 4 t~ft~~Q~~~Le~~F~~~---~--y--p~~~~r~~La~~l~l~~~qV~~WFq 48 (60)
T 3a02_A 4 MTFTSFQLEELEKAFSRT---H--Y--PDVFTREELAMKIGLTEARIQVWFQ 48 (60)
T ss_dssp -CCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHcC---C--C--cCHHHHHHHHHHHCcCHHHHHHHhh
Confidence 678999999999999641 1 2 4556677889999999999988874
No 366
>2cra_A Homeobox protein HOX-B13; DNA-binding, transcription regulation, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=78.08 E-value=2.8 Score=25.10 Aligned_cols=46 Identities=7% Similarity=0.033 Sum_probs=36.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+...++..+++++.+|..|+.
T Consensus 11 Rt~ft~~Q~~~Le~~F~~~---~--y--p~~~~r~~LA~~l~l~~~qV~~WFq 56 (70)
T 2cra_A 11 RIPYSKGQLRELEREYAAN---K--F--ITKDKRRKISAATSLSERQITIWFQ 56 (70)
T ss_dssp CCCSCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhc---C--C--CCHHHHHHHHHHHCCCHHHhhHhhH
Confidence 3679999999999999742 1 2 5556678899999999999998874
No 367
>3nau_A Zinc fingers and homeoboxes protein 2; ZHX2, corepressor, homeodomain, domain swapping, structural oxford protein production facility, OPPF; 2.70A {Homo sapiens}
Probab=77.90 E-value=2.6 Score=25.14 Aligned_cols=44 Identities=16% Similarity=0.274 Sum_probs=34.2
Q ss_pred cCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 12 LSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 12 ~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
.-|.+++..|...|..-.- |+..+...++..++|++.+|..|+.
T Consensus 10 ~~~~~Ql~~LE~~F~~~~Y-------Ps~~er~eLA~~tgLt~~qVkvWFq 53 (66)
T 3nau_A 10 KKTKEQIAHLKASFLQSQF-------PDDAEVYRLIEVTGLARSEIKKWFS 53 (66)
T ss_dssp -CCHHHHHHHHHHHHGGGS-------CCHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhcCCC-------CCHHHHHHHHHHhCcCHHHhhHhcc
Confidence 3467888888888874332 5567788999999999999988874
No 368
>2vi6_A Homeobox protein nanog; homeodomain, DNA-binding, transcription, transcription facto developmental protein, transcription regulation, NUC homeobox; 2.6A {Mus musculus}
Probab=77.03 E-value=2.9 Score=24.25 Aligned_cols=46 Identities=11% Similarity=0.060 Sum_probs=35.8
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+...++..+++++..|..|+.
T Consensus 7 Rt~ft~~q~~~Le~~F~~~---~--y--p~~~~r~~LA~~l~l~~~qV~~WFq 52 (62)
T 2vi6_A 7 RTVFSQAQLCALKDRFQKQ---K--Y--LSLQQMQELSSILNLSYKQVKTWFQ 52 (62)
T ss_dssp -CCCCHHHHHHHHHHHHHC---S--C--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhC---C--C--CCHHHHHHHHHHhCCCHHHhhHHhH
Confidence 3679999999999999642 1 2 5556677889999999999988874
No 369
>1akh_A Protein (mating-type protein A-1); complex (TWO DNA-binding proteins/DNA), complex, DNA- binding protein, DNA; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: a.4.1.1 PDB: 1f43_A 1yrn_A*
Probab=76.90 E-value=2.6 Score=24.31 Aligned_cols=46 Identities=17% Similarity=0.172 Sum_probs=35.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- +. |+..+...++..++++..+|..|+.
T Consensus 9 Rt~ft~~q~~~Le~~f~~~-----~y--p~~~~r~~La~~~~l~~~qV~~WFq 54 (61)
T 1akh_A 9 KSSISPQARAFLEEVFRRK-----QS--LNSKEKEEVAKKCGITPLQVRVWFI 54 (61)
T ss_dssp ---CCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhC-----CC--cCHHHHHHHHHHHCcCHHHHHHHHH
Confidence 3678999999999999743 22 5566778899999999999988874
No 370
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=76.79 E-value=5.9 Score=24.16 Aligned_cols=48 Identities=17% Similarity=0.036 Sum_probs=35.3
Q ss_pred HHHHHHHHHhhccCChHHHHHHHHHHhcCCCCC--cccHHHHHHHHHHHh
Q psy8447 111 LDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDG--FITREEMFQLLRNSL 158 (229)
Q Consensus 111 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G--~I~~~e~~~~l~~~~ 158 (229)
|..|+..+..-....+-+++..+.++|-..+.+ .||.+|+..+|..+.
T Consensus 9 ~w~yI~GMLtN~~slpl~RIh~mLkmf~~~~~~~~~it~~eL~~fL~~~v 58 (74)
T 1ldd_A 9 SLPFIEGMLTNLGAMKLHKIHSFLKITVPKDWGYNRITLQQLEGYLNTLA 58 (74)
T ss_dssp HHHHHHHHHHHHCSEEHHHHHHHHHHHSCGGGCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHhCCCCCCCCcCCHHHHHHHHHHHH
Confidence 445666555555667788999999999776544 489999999998763
No 371
>2da2_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=76.63 E-value=3.2 Score=24.73 Aligned_cols=46 Identities=11% Similarity=0.131 Sum_probs=36.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+...++..+++++..|..|+.
T Consensus 11 Rt~ft~~q~~~Le~~F~~~---~--y--p~~~~r~~LA~~l~l~~~qV~~WFq 56 (70)
T 2da2_A 11 RTRFTDYQLRVLQDFFDAN---A--Y--PKDDEFEQLSNLLNLPTRVIVVWFQ 56 (70)
T ss_dssp CCCCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHcC---C--C--cCHHHHHHHHHHhCCCHHHhHHhhH
Confidence 4679999999999999752 1 2 5566677889999999999988874
No 372
>2h1k_A IPF-1, pancreatic and duodenal homeobox 1, homeodomain; protein-DNA complex, transcription/DNA complex; 2.42A {Mesocricetus auratus}
Probab=76.53 E-value=3.2 Score=24.18 Aligned_cols=46 Identities=11% Similarity=-0.010 Sum_probs=36.2
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- .. |...+...++..+++++..|..|+.
T Consensus 7 Rt~ft~~Q~~~Le~~F~~~-----~y--p~~~~r~~LA~~l~l~~~qV~~WFq 52 (63)
T 2h1k_A 7 RTAYTRAQLLELEKEFLFN-----KY--ISRPRRVELAVMLNLTERHIKIWFQ 52 (63)
T ss_dssp CCCCCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHhcC-----CC--cCHHHHHHHHHHhCcCHHHhhHHHH
Confidence 3679999999999999742 12 5556677889999999999988874
No 373
>2e1o_A Homeobox protein PRH; DNA binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=76.23 E-value=3.3 Score=24.76 Aligned_cols=46 Identities=11% Similarity=0.037 Sum_probs=36.3
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- .. |...+...++..+++++.+|..|+.
T Consensus 11 R~~ft~~q~~~Le~~F~~~-----~y--p~~~~r~~La~~l~l~~~qV~~WFq 56 (70)
T 2e1o_A 11 QVRFSNDQTIELEKKFETQ-----KY--LSPPERKRLAKMLQLSERQVKTWFQ 56 (70)
T ss_dssp CCCCCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHcC-----CC--cCHHHHHHHHHHHCCCHHHhhHhhH
Confidence 3679999999999999641 12 5566678899999999999988874
No 374
>1puf_B PRE-B-cell leukemia transcription factor-1; homeodomian, protein-DNA complex, HOX hexapeptide, TALE homeodomain, homeodomain interaction; 1.90A {Homo sapiens} SCOP: a.4.1.1 PDB: 1b8i_B* 2r5y_B* 2r5z_B*
Probab=76.21 E-value=4 Score=24.55 Aligned_cols=48 Identities=19% Similarity=0.236 Sum_probs=36.9
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.||..++..|...|....... . |+..+...++..++++..+|..|+.
T Consensus 6 ~~ft~~q~~~Le~~f~~~~~~~--y--P~~~~r~~La~~~~L~~~qV~~WFq 53 (73)
T 1puf_B 6 RNFNKQATEILNEYFYSHLSNP--Y--PSEEAKEELAKKCGITVSQVSNWFG 53 (73)
T ss_dssp CCCCHHHHHHHHHHHHHTTTSC--C--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHhccCC--C--cCHHHHHHHHHHHCcCHHHHHHHHH
Confidence 6789999999999996433222 2 5566778899999999999988874
No 375
>2dmq_A LIM/homeobox protein LHX9; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.85 E-value=3.4 Score=25.40 Aligned_cols=46 Identities=13% Similarity=0.116 Sum_probs=36.5
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||.+++..|...|.... . |...+...++..+++++..|..|+.
T Consensus 11 Rt~ft~~Q~~~Le~~F~~~~-----y--p~~~~r~~La~~l~l~~~qV~~WFq 56 (80)
T 2dmq_A 11 RTSFKHHQLRTMKSYFAINH-----N--PDAKDLKQLAQKTGLTKRVLQVWFQ 56 (80)
T ss_dssp CCCCCHHHHHHHHHHHHHCS-----S--CCHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcC-----C--CCHHHHHHHHHHhCCCHHHhhHccH
Confidence 46899999999999997421 2 5566778899999999999988874
No 376
>1wh5_A ZF-HD homeobox family protein; structural genomics, zinc finger homeobox family protein, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: a.4.1.1
Probab=75.83 E-value=3.4 Score=25.60 Aligned_cols=51 Identities=8% Similarity=0.009 Sum_probs=37.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-+.||.+++..|...|..+-- .... |...+...++..++|++..|+.|+..
T Consensus 21 Rt~ft~~Ql~~Le~~f~~~~~-~~~y--p~~~~r~~La~~lgL~~~~VkvWFqN 71 (80)
T 1wh5_A 21 RTKFTAEQKERMLALAERIGW-RIQR--QDDEVIQRFCQETGVPRQVLKVWLHN 71 (80)
T ss_dssp SCCCCHHHHHHHHHHHHHHTS-CCCT--TTHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHhccC-cCCC--cCHHHHHHHHHHhCCCcccccCCccc
Confidence 478999999999998886410 0111 44556678899999999999988743
No 377
>1x2n_A Homeobox protein pknox1; homeobox domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=75.29 E-value=4.5 Score=24.31 Aligned_cols=49 Identities=6% Similarity=0.075 Sum_probs=37.1
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.|+..++..|...|....... . |+..+...++..++++..+|..|+.
T Consensus 11 R~~~~~~q~~~Le~~f~~~~~~~--y--p~~~~r~~La~~~~L~~~qV~~WFq 59 (73)
T 1x2n_A 11 RGVLPKHATNVMRSWLFQHIGHP--Y--PTEDEKKQIAAQTNLTLLQVNNWFI 59 (73)
T ss_dssp SCCCCHHHHHHHHHHHHHTTTSC--C--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHhCCCC--C--CCHHHHHHHHHHHCcCHHHHHHHhH
Confidence 36789999999999997532222 2 5566777889999999999988864
No 378
>2dmt_A Homeobox protein BARH-like 1; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.26 E-value=3.3 Score=25.52 Aligned_cols=46 Identities=17% Similarity=0.128 Sum_probs=36.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- .. |...+...++..+++++.+|..|+.
T Consensus 21 Rt~ft~~Q~~~Le~~F~~~-----~y--p~~~~r~~LA~~l~L~~~qV~vWFq 66 (80)
T 2dmt_A 21 RTVFTELQLMGLEKRFEKQ-----KY--LSTPDRIDLAESLGLSQLQVKTWYQ 66 (80)
T ss_dssp CCCCCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhc-----CC--CCHHHHHHHHHHhCCCHHHeeeccH
Confidence 3678999999999999742 12 5556677889999999999988874
No 379
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=75.26 E-value=3 Score=29.31 Aligned_cols=64 Identities=14% Similarity=0.108 Sum_probs=42.8
Q ss_pred CChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHh
Q psy8447 52 LPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSC 120 (229)
Q Consensus 52 l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~ 120 (229)
++-+.+..+...++..+.+.|+..|-..+++.-........ .. ..|.. ++..||-+|+-..+..
T Consensus 12 ~~~eAi~~lH~~lDdD~dG~Id~~Es~~flredl~~~d~~~-~~---~~fh~-~D~~Isv~eLw~~W~~ 75 (150)
T 2k60_A 12 LSFEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTV-KH---STFHG-EDKLISVEDLWKAWKS 75 (150)
T ss_dssp CHHHHHHHHHHTTCTTCSSEECTTTTTTHHHHHTTSSCTHH-HH---HHHTS-SSCCEEHHHHHHHHHH
T ss_pred hhhHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhccccchh-hh---hcccC-CCCeeeHHHHHHHhcc
Confidence 55577777777777666666888888888887544333222 12 34443 5679999998887765
No 380
>1du6_A PBX1, homeobox protein PBX1; homeodomain, gene regulation; NMR {Mus musculus} SCOP: a.4.1.1
Probab=75.14 E-value=2.8 Score=24.50 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=36.8
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
+.|+..++..|...|....... . |+..+...++..++++..+|..|+..
T Consensus 8 ~~ft~~q~~~Le~~f~~~~~~~--y--p~~~~r~~La~~~~L~~~qV~~WFqN 56 (64)
T 1du6_A 8 RHMNKQATEILNEYFYSHLSNP--Y--PSEEAKEELAKKCGITVSQVSNWFGN 56 (64)
T ss_dssp CSSTTTHHHHHHHHHHHTTTSC--C--CCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHcccCC--C--CCHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 5788889999988886333222 2 55667788999999999999988743
No 381
>1wi3_A DNA-binding protein SATB2; homeodomain, helix-turn-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=74.48 E-value=3.3 Score=24.94 Aligned_cols=48 Identities=8% Similarity=0.055 Sum_probs=38.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-|.|+.+++..|+..|...... |.......++..++|++..|..|+..
T Consensus 11 RT~~s~eQL~~Lqs~f~~~~~y------Pd~~~r~~La~~tGL~~~~IqVWFQN 58 (71)
T 1wi3_A 11 RTKISLEALGILQSFIHDVGLY------PDQEAIHTLSAQLDLPKHTIIKFFQN 58 (71)
T ss_dssp CCCCCSHHHHHHHHHHHHHCSC------CCHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHhcCCC------CCHHHHHHHHHHhCCCHHHHHHhhcc
Confidence 3688999999999999975543 33456789999999999999988754
No 382
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Probab=73.88 E-value=13 Score=31.62 Aligned_cols=87 Identities=15% Similarity=0.258 Sum_probs=55.7
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCC-cccHHHHHHHHhcCh-HHHHH
Q psy8447 131 KFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDG-KISFQDFQQSVTDEP-LLLEA 208 (229)
Q Consensus 131 ~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg-~Is~~ef~~~~~~~~-~~~~~ 208 (229)
..+|..| .++.|.|+...|..+|+..|....+. .+.+....+-+......+| .|+.+-|.+++...- .+.++
T Consensus 71 d~lf~~~-~~~~~~i~~~~f~~~l~~~Gl~~~Dp-----Rl~~~~~~l~~~~~~~~~~~~~d~~~F~~~i~~~~~li~~a 144 (534)
T 3uo9_A 71 DLLFYTI-AEGQEKIPVHKFITALKSTGLRTSDP-----RLKECMDMLRLTLQTTSDGVMLDKDLFKKCVQSNIVLLTQA 144 (534)
T ss_dssp HHHHHHH-HTTCSSEEHHHHHHHHHHTTCCTTCG-----GGHHHHHHHHHHHHHCSSTTEECHHHHHHHHGGGHHHHHHH
T ss_pred HHHHHHH-hCCCcEeeHHHHHHHHHHcCCCCCCc-----hHHHHHHHHHHHhhccCccccccHHHHHHHhhccHHHHHHH
Confidence 4568888 56789999999999998876544332 2333333333333333345 699999999998776 56778
Q ss_pred hcccC--CChHHHHHHH
Q psy8447 209 FGQCL--PSDAARQSFL 223 (229)
Q Consensus 209 ~~~~~--~~~~~~~~~~ 223 (229)
|+..+ |+-+.....+
T Consensus 145 ~~~~~vipdf~~~~~~L 161 (534)
T 3uo9_A 145 FRRKFVIPDFMSFTSHI 161 (534)
T ss_dssp HHTCSSSSSHHHHHHHH
T ss_pred HhcCCCcCCHHHHHHHH
Confidence 87766 4444343333
No 383
>1ftt_A TTF-1 HD, thyroid transcription factor 1 homeodomain; DNA binding protein; NMR {Rattus norvegicus} SCOP: a.4.1.1
Probab=73.57 E-value=4 Score=24.20 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=36.3
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..-. . |...+...++..+++++..|..|+.
T Consensus 6 Rt~ft~~Q~~~Le~~F~~~~-----y--p~~~~r~~LA~~l~l~~~qV~~WFq 51 (68)
T 1ftt_A 6 RVLFSQAQVYELERRFKQQK-----Y--LSAPEREHLASMIHLTPTQVKIWFQ 51 (68)
T ss_dssp CSSCCHHHHHHHHHHHHHSS-----S--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHhCC-----C--CCHHHHHHHHHHhCCCHHHhHHHhH
Confidence 36799999999999997321 2 5556677889999999999988874
No 384
>2ly9_A Zinc fingers and homeoboxes protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=73.48 E-value=4.1 Score=24.57 Aligned_cols=47 Identities=11% Similarity=0.228 Sum_probs=37.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-+.||..++..|...|..- . . |...+...++..++++..+|+.|+..
T Consensus 10 Rt~ft~~Ql~~Le~~F~~~---~--y--p~~~~r~~La~~l~l~~~qV~~WFqN 56 (74)
T 2ly9_A 10 RAKKTKEQLAELKVSYLKN---Q--F--PHDSEIIRLMKITGLTKGEIKKWFSD 56 (74)
T ss_dssp TCCCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHHHc---C--C--CCHHHHHHHHHHhCcCHHHeeeCChh
Confidence 4789999999999999741 1 2 45566778899999999999888753
No 385
>1daq_A Endoglucanase SS, CELS; cellulose degradation, cellulosome, calcium-binding, hydrolase; NMR {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1dav_A
Probab=73.48 E-value=1.4 Score=26.65 Aligned_cols=54 Identities=26% Similarity=0.167 Sum_probs=36.0
Q ss_pred ccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh
Q psy8447 102 DRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI 159 (229)
Q Consensus 102 d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~ 159 (229)
|.|++|.|+-.+|..+-..+...... .-....|.+++|.|+..++..+-+.+.+
T Consensus 8 DvN~Dg~vn~~D~~~l~~yllg~~~~----~~~~~aDvn~DG~in~~D~~~l~~~llg 61 (71)
T 1daq_A 8 DVNDDGKVNSTDAVALKRYVLRSGIS----INTDNADLNEDGRVNSTDLGILKRYILK 61 (71)
T ss_dssp CSSSSSCSSGGGHHHHHHHHHCSCSC----CCGGGTCSSSSSSCSSHHHHHHHHHTTT
T ss_pred CCCCCCcCCHHHHHHHHHHHcCCCcc----ccchhhcccCCCcccHHHHHHHHHHHhC
Confidence 56888888888776655444322211 0145779999999999999776655543
No 386
>1wh7_A ZF-HD homeobox family protein; homeobox domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.4.1.1
Probab=73.36 E-value=9.4 Score=23.55 Aligned_cols=51 Identities=8% Similarity=-0.009 Sum_probs=36.2
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-|.||.+++..|. .|..-..=.... |....-..++..++|++..|+-|+..
T Consensus 21 Rt~ft~~Ql~~Le-~F~~~~~w~~~y--p~~~~r~~La~~lgL~e~qVkvWFqN 71 (80)
T 1wh7_A 21 RTKFTAEQKEKML-AFAERLGWRIQK--HDDVAVEQFCAETGVRRQVLKIWMHN 71 (80)
T ss_dssp CCCCCHHHHHHHH-HHHHHHTSCCCS--STTHHHHHHHHHSCCCHHHHHHHHHT
T ss_pred CccCCHHHHHHHH-HHHHHcCcCCCC--CCHHHHHHHHHHhCcCcCcccccccc
Confidence 3679999999998 677632211112 44566778889999999999888743
No 387
>2hi3_A Homeodomain-only protein; transcription; NMR {Mus musculus} SCOP: a.4.1.1
Probab=72.62 E-value=4.4 Score=24.42 Aligned_cols=47 Identities=21% Similarity=0.276 Sum_probs=36.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|....+. |...+...++..+++++.+|..|+.
T Consensus 6 Rt~ft~~Q~~~Le~~F~~~~~y------p~~~~r~~LA~~~~l~~~qV~~WFq 52 (73)
T 2hi3_A 6 VSGPTEDQVEILEYNFNKVNKH------PDPTTLCLIAAEAGLTEEQTQKWFK 52 (73)
T ss_dssp CSSCCHHHHHHHHHHHHHTTSS------CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCC------CCHHHHHHHHHHHCcCHHHHHHHHH
Confidence 4789999999999999643321 4455677889999999999988873
No 388
>2k40_A Homeobox expressed in ES cells 1; thermostable homeodomain variant, DNA binding protein, developmental protein, disease mutation, DNA-binding; NMR {Homo sapiens}
Probab=72.56 E-value=5.4 Score=23.46 Aligned_cols=45 Identities=13% Similarity=0.133 Sum_probs=35.3
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.||..++..|...|.. ++. |...+...++..+++++..|..|+.
T Consensus 6 t~ft~~q~~~Le~~F~~-----~~y--p~~~~r~~La~~l~l~~~qV~~WFq 50 (67)
T 2k40_A 6 TAFTQNQIEVLENVFRV-----NCY--PGIDILEDLAQKLNLELDRIQIWFQ 50 (67)
T ss_dssp CCCCHHHHHHHHHHHTT-----CSS--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh-----cCC--CCHHHHHHHHHHHCcCHHHhhHhhH
Confidence 67899999999998852 222 5566677889999999999988874
No 389
>3rkq_A Homeobox protein NKX-2.5; helix-turn-helix, DNA binding, nucleus, transcription-DNA CO; 1.70A {Homo sapiens}
Probab=72.34 E-value=5 Score=22.68 Aligned_cols=46 Identities=17% Similarity=0.130 Sum_probs=35.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|. .+.. |...+...++..++++..+|..|+.
T Consensus 6 Rt~~t~~q~~~Le~~F~-----~~~y--p~~~~r~~La~~l~l~~~qV~~WFq 51 (58)
T 3rkq_A 6 RVLFSQAQVYELERRFK-----QQRY--LSAPERDQLASVLKLTSTQVKIWFQ 51 (58)
T ss_dssp CCCCCHHHHHHHHHHHT-----TCSS--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHH-----HcCC--CCHHHHHHHHHHhCcCHHHHHHhhH
Confidence 36789999999998885 1222 5556677888999999999988874
No 390
>2dms_A Homeobox protein OTX2; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=71.83 E-value=4.9 Score=24.69 Aligned_cols=46 Identities=24% Similarity=0.206 Sum_probs=36.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+...++..+++++..|..|+.
T Consensus 11 Rt~ft~~Q~~~Le~~F~~~---~--y--p~~~~r~~La~~l~l~~~qV~~WFq 56 (80)
T 2dms_A 11 RTTFTRAQLDVLEALFAKT---R--Y--PDIFMREEVALKINLPESRVQVWFK 56 (80)
T ss_dssp CSSCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHcc---C--C--CCHHHHHHHHHHHCcCHHHhhhhhH
Confidence 3679999999999999752 1 2 5556677889999999999988874
No 391
>2djn_A Homeobox protein DLX-5; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.66 E-value=3 Score=24.92 Aligned_cols=47 Identities=13% Similarity=0.156 Sum_probs=36.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-+.||..++..|...|.. ... |...+...++..+++++.+|..|+..
T Consensus 11 Rt~ft~~Q~~~Le~~F~~-----~~y--p~~~~r~~La~~l~l~~~qV~~WFqN 57 (70)
T 2djn_A 11 RTIYSSFQLAALQRRFQK-----TQY--LALPERAELAASLGLTQTQVKIWFQN 57 (70)
T ss_dssp SCSSCHHHHHHHHHHHTT-----CSS--CCHHHHHHHHHHSSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHcC-----CCC--CCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 467999999999999853 122 55666788899999999999988743
No 392
>1fjl_A Paired protein; DNA-binding protein, paired BOX, transcription regulation; HET: DNA; 2.00A {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 3a01_B
Probab=71.22 E-value=6.3 Score=24.23 Aligned_cols=46 Identities=11% Similarity=0.185 Sum_probs=35.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|.. ... |...+...++..++++...|..|+.
T Consensus 22 Rt~ft~~Q~~~Le~~F~~-----~~y--p~~~~r~~LA~~l~l~~~qV~~WFq 67 (81)
T 1fjl_A 22 RTTFSASQLDELERAFER-----TQY--PDIYTREELAQRTNLTEARIQVWFQ 67 (81)
T ss_dssp CCCCCHHHHHHHHHHHHH-----CSS--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-----cCC--CCHHHHHHHHHHHCcCHHHHHHHHH
Confidence 367899999999998864 112 4556667888899999999888874
No 393
>1mnm_C Protein (MAT alpha-2 transcriptional repressor); transcription regulation, transcriptional repression, DNA- binding protein; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.1
Probab=70.86 E-value=6.1 Score=24.69 Aligned_cols=49 Identities=10% Similarity=0.039 Sum_probs=37.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.|+..++..|...|..-..... |...+...++..++++..+|..|+.
T Consensus 31 r~~ft~~q~~~Le~~f~~~~~~~y----P~~~~r~~La~~~gL~~~qV~~WFq 79 (87)
T 1mnm_C 31 GHRFTKENVRILESWFAKNIENPY----LDTKGLENLMKNTSLSRIQIKNWVS 79 (87)
T ss_dssp TCCCCHHHHHHHHHHHHHTTSSCC----CCHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHhCCCCC----cCHHHHHHHHHHHCcCHHHHHHHHH
Confidence 367899999999999975332222 5566777889999999999988874
No 394
>2l7z_A Homeobox protein HOX-A13; gene regulation; NMR {Homo sapiens} PDB: 2ld5_A*
Probab=70.77 E-value=4.9 Score=24.21 Aligned_cols=46 Identities=9% Similarity=0.053 Sum_probs=36.5
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- .. |...+...++..+++++.+|..|+.
T Consensus 11 Rt~ft~~Q~~~Le~~F~~~-----~y--p~~~~r~~LA~~l~l~~~qV~vWFq 56 (73)
T 2l7z_A 11 RVPYTKVQLKELEREYATN-----KF--ITKDKRRRISATTNLSERQVTIWFQ 56 (73)
T ss_dssp CCCSCHHHHHHHHHHHHHT-----SC--CCHHHHHHHHHHHTSCSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhhC-----CC--cCHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4679999999999999752 12 5556677889999999999988874
No 395
>1nk2_P Homeobox protein VND; homeodomain, DNA-binding protein, embryonic development, complex (homeodomain/DNA); HET: DNA; NMR {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 1nk3_P* 1vnd_A 1qry_A
Probab=70.08 E-value=5.4 Score=24.30 Aligned_cols=46 Identities=13% Similarity=0.149 Sum_probs=35.9
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+...++..+++++..|..|+.
T Consensus 13 Rt~ft~~Q~~~Le~~F~~~---~--y--p~~~~r~~La~~l~l~~~qV~~WFq 58 (77)
T 1nk2_P 13 RVLFTKAQTYELERRFRQQ---R--Y--LSAPEREHLASLIRLTPTQVKIWFQ 58 (77)
T ss_dssp CCCCCHHHHHHHHHHHHHC---S--C--CCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHhhc---C--C--CCHHHHHHHHHHhCCCHHHHHHHhH
Confidence 3678999999999999742 1 1 4556677889999999999988874
No 396
>3k2a_A Homeobox protein MEIS2; homeobox domain, DNA-binding, transcription, nucleus, phosphoprotein, DNA bindi protein; 1.95A {Homo sapiens} SCOP: a.4.1.1
Probab=69.66 E-value=6.5 Score=23.24 Aligned_cols=48 Identities=13% Similarity=0.126 Sum_probs=35.5
Q ss_pred cCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 12 LSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 12 ~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
.||.+.+..|...|........ |+..+-..++..++++..+|..|+..
T Consensus 4 ~f~~~~~~~L~~~f~~h~~~py----p~~~~r~~La~~~~l~~~qV~~WFqN 51 (67)
T 3k2a_A 4 IFPKVATNIMRAWLFQHLTHPY----PSEEQKKQLAQDTGLTILQVNNWFIN 51 (67)
T ss_dssp --CHHHHHHHHHHHHHTTTSCC----CCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhccCCC----CCHHHHHHHHHHhCcCHHHhhhhhHH
Confidence 5788899999888885543333 55667788999999999999888754
No 397
>2kt0_A Nanog, homeobox protein nanog; homeodomain, structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; NMR {Homo sapiens}
Probab=69.47 E-value=5.8 Score=24.54 Aligned_cols=46 Identities=9% Similarity=0.036 Sum_probs=35.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..-. . |...+...++..++++...|..|+.
T Consensus 26 Rt~ft~~Q~~~Le~~F~~~~-----y--p~~~~r~~La~~l~l~~~qV~vWFq 71 (84)
T 2kt0_A 26 RTVFSSTQLCVLNDRFQRQK-----Y--LSLQQMQELSNILNLSYKQVKTWFQ 71 (84)
T ss_dssp SSCCCHHHHHHHHHHHHHSS-----S--CCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCC-----C--CCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 46789999999999996421 1 4455677889999999999988874
No 398
>1le8_B Mating-type protein alpha-2; matalpha2, isothermal titration calorimetry, protein-DNA complex, transcription/DNA complex; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.1.1 PDB: 1akh_B* 1apl_C* 1yrn_B*
Probab=68.10 E-value=7.4 Score=24.09 Aligned_cols=49 Identities=10% Similarity=0.069 Sum_probs=37.8
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
+.||..++..|...|........ |...+...++..++++..+|..|+..
T Consensus 7 ~rft~~q~~~Le~~f~~h~~~~y----P~~~~r~~La~~~gLt~~qV~~WFqN 55 (83)
T 1le8_B 7 HRFTKENVRILESWFAKNIENPY----LDTKGLENLMKNTSLSRIQIKNWVAA 55 (83)
T ss_dssp CCCCHHHHHHHHHHHHHTSSSCC----CCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhCCCCC----cCHHHHHHHHHHHCCCHHHcccccHH
Confidence 34899999999999985333232 55667788999999999999988744
No 399
>2da3_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=68.03 E-value=2.8 Score=25.77 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=34.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||.+++..|...|... . . |...+...++..+++++..|..|+.
T Consensus 21 Rt~ft~~Ql~~Le~~f~~~---~--y--p~~~~r~~La~~l~l~~~qV~~WFq 66 (80)
T 2da3_A 21 RTTITPEQLEILYQKYLLD---S--N--PTRKMLDHIAHEVGLKKRVVQVWFQ 66 (80)
T ss_dssp CSSCCTTTHHHHHHHHHHC---S--S--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhc---C--C--CCHHHHHHHHHHHCcCHHHhHHHhH
Confidence 3678888888888888643 1 1 4455667888889999988888874
No 400
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=68.00 E-value=16 Score=22.80 Aligned_cols=26 Identities=31% Similarity=0.509 Sum_probs=21.2
Q ss_pred cHHHHHHHHhcChHHHHHhcccCCCh
Q psy8447 191 SFQDFQQSVTDEPLLLEAFGQCLPSD 216 (229)
Q Consensus 191 s~~ef~~~~~~~~~~~~~~~~~~~~~ 216 (229)
-+++-..++..+|++++-|..++|++
T Consensus 58 V~~~V~~Lf~~hpDLl~~F~~FLP~~ 83 (85)
T 1e91_A 58 VFTEVANLFRGQEDLLSEFGQFLPEA 83 (85)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHccCHHHHHHHHHHCcCc
Confidence 34556667889999999999999875
No 401
>1b72_B Protein (PBX1); homeodomain, DNA, complex, DNA-binding protein, protein/DNA complex; HET: DNA; 2.35A {Homo sapiens} SCOP: a.4.1.1 PDB: 1lfu_P
Probab=67.99 E-value=5.9 Score=24.70 Aligned_cols=49 Identities=18% Similarity=0.234 Sum_probs=36.9
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
+.|+..++..|...|....... . |...+...++..++++..+|..|+..
T Consensus 6 ~~ft~~q~~~Le~~f~~h~~~~--y--p~~~~r~~La~~~~l~~~qV~~WFqN 54 (87)
T 1b72_B 6 RNFNKQATEILNEYFYSHLSNP--Y--PSEEAKEELAKKCGITVSQVSNWFGN 54 (87)
T ss_dssp CCCCHHHHHHHHHHHHTTTTSC--C--CCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccCC--C--CCHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 6789999999999985322222 2 55667788999999999999888743
No 402
>1puf_A HOX-1.7, homeobox protein HOX-A9; homeodomian, protein-DNA complex, HOX hexapeptide, TALE homeodomain, homeodomain interaction; 1.90A {Mus musculus} SCOP: a.4.1.1 PDB: 1san_A
Probab=67.94 E-value=6.3 Score=23.98 Aligned_cols=46 Identities=13% Similarity=-0.041 Sum_probs=35.7
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+...++..+++++..|..|+.
T Consensus 17 Rt~ft~~Q~~~Le~~F~~~---~--y--p~~~~r~~LA~~l~l~~~qV~vWFq 62 (77)
T 1puf_A 17 RCPYTKHQTLELEKEFLFN---M--Y--LTRDRRYEVARLLNLTERQVKIWFQ 62 (77)
T ss_dssp CCCCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcc---C--C--CCHHHHHHHHHHHCcCHHHHHHHHH
Confidence 4678999999999999742 1 1 4556677889999999999988874
No 403
>1uhs_A HOP, homeodomain only protein; structural genomics, cardiac development, riken structural genomics/proteomics initiative, RSGI, transcription; NMR {Mus musculus} SCOP: a.4.1.1
Probab=66.89 E-value=4.7 Score=24.16 Aligned_cols=46 Identities=22% Similarity=0.273 Sum_probs=35.6
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.||..++..|...|....+ . |...+...++..+++++.+|..|+.
T Consensus 6 t~ft~~Q~~~Le~~F~~~~~----y--p~~~~r~~LA~~l~l~~~qV~~WFq 51 (72)
T 1uhs_A 6 ATMTEDQVEILEYNFNKVNK----H--PDPTTLCLIAAEAGLTEEQTQKWFK 51 (72)
T ss_dssp CCCCHHHHHHHHHHHHSSCS----S--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHccCC----C--CCHHHHHHHHHHHCcCHHHhhHHhH
Confidence 67999999999999963221 2 4455677889999999999988873
No 404
>2da5_A Zinc fingers and homeoboxes protein 3; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.84 E-value=6.8 Score=23.73 Aligned_cols=45 Identities=7% Similarity=0.116 Sum_probs=35.3
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.+|.+++..|...|..-. . |...+...++..++++..+|..|+.
T Consensus 12 ~~~t~~Ql~~Le~~F~~~~-----y--p~~~~r~~LA~~l~l~~~qV~~WFq 56 (75)
T 2da5_A 12 KERAPEQLRALESSFAQNP-----L--PLDEELDRLRSETKMTRREIDSWFS 56 (75)
T ss_dssp CCCCHHHHHHHHHHHHHCS-----S--CCHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhccC-----C--CCHHHHHHHHHHhCCCHHHhhHhhH
Confidence 4689999999999996421 1 4556677889999999999998874
No 405
>1zq3_P PRD-4, homeotic bicoid protein; protein-DNA complex, double helix, helix-turn-helix; NMR {Drosophila melanogaster} SCOP: a.4.1.1
Probab=66.35 E-value=4.1 Score=24.14 Aligned_cols=46 Identities=11% Similarity=0.037 Sum_probs=35.6
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|.. ... |...+...++..+++++..|..|+.
T Consensus 6 Rt~ft~~Q~~~Le~~F~~-----~~y--p~~~~r~~La~~l~l~~~qV~~WFq 51 (68)
T 1zq3_P 6 RTTFTSSQIAELEQHFLQ-----GRY--LTAPRLADLSAKLALGTAQVKIWFK 51 (68)
T ss_dssp SCCCCHHHHHHHHHHHTT-----CSS--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHhc-----CCC--cCHHHHHHHHHHhCcCHHHhhHhhH
Confidence 367999999999998863 112 5556677889999999999988874
No 406
>2cue_A Paired box protein PAX6; homeobox domain, transcription factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=65.82 E-value=4.7 Score=24.80 Aligned_cols=46 Identities=15% Similarity=0.223 Sum_probs=35.6
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|.. ... |...+...++..+++++..|..|+.
T Consensus 11 Rt~ft~~Q~~~Le~~F~~-----~~y--p~~~~r~~LA~~l~l~~~qV~vWFq 56 (80)
T 2cue_A 11 RTSFTQEQIEALEKEFER-----THY--PDVFARERLAAKIDLPEARIQVWFS 56 (80)
T ss_dssp CCCSCHHHHHHHHHHHTT-----CSS--CCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHhc-----cCC--CCHHHHHHHHHHhCCCHHHhhHHHH
Confidence 367999999999998863 112 5556677889999999999988874
No 407
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=65.60 E-value=45 Score=25.81 Aligned_cols=170 Identities=12% Similarity=0.085 Sum_probs=100.8
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhcc--CccCC-CCCCHHHHHHHHhhhcCCCc
Q psy8447 13 SFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGF--SPFSF-QGLDRVVFRELLHNTFDLVT 89 (229)
Q Consensus 13 ~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f--~~~d~-~~i~~~ef~~~l~~~~~~~~ 89 (229)
.+...+..+.+.|. .. ..+...-+.++...++++++++.-+.-.+ ..-.. +.+++.+|...+..++....
T Consensus 71 ~~~~~l~~lF~~Y~-----~~--d~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~a~~~~g~ftr~ef~~G~~~l~~dsi 143 (270)
T 3bq3_A 71 VYPKELTQVFEHYI-----NN--NLFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQGCSTI 143 (270)
T ss_dssp SSCHHHHHHHHHHC-----BT--TBCCHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTSCCCHHHHHHHHHHTTCCSH
T ss_pred ccHHHHHHHHHHhc-----CC--CccCHhhHHHHHHHcCCChhhHHHHHHHHHcCCCccCceeeHHHHHHHHHHhCCCCH
Confidence 34566666666664 11 22455556777788899998887665443 33444 55999999999988765321
Q ss_pred HH----------------HHHHHH----HHHHccCCCCceeHHHHHHHHHhhccCCh-----HHHHHHHHHHhcCCCCCc
Q psy8447 90 EE----------------ILMERI----FCAFDRLCDGVIHLDEWVLGLSCFLRGTN-----EELIKFTFLIYDLNNDGF 144 (229)
Q Consensus 90 ~~----------------~~~~~l----f~~~d~~~~g~I~~~ef~~~~~~~~~~~~-----~~~~~~~F~~~D~~~~G~ 144 (229)
.. ...+.+ |...-..+...|+.+-=+.++..+..+.. ...+....+.....+...
T Consensus 144 ~~lk~~l~~l~~~~~~d~~~Fk~~Y~f~F~~~r~~gqk~l~~d~Ai~~W~lll~~~~p~~~~~~~l~~W~~FL~~~~~k~ 223 (270)
T 3bq3_A 144 SDMQECIKTLDVKLHEDLQYFTQIYNYAFNLILDPNRKDIDTDEGIQYWKLFFQPEYPVRMEPDLLEAWFRFLRDEGKTT 223 (270)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCTTCSEEEHHHHHHHHHHHTSTTSSCCCCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhcCcCcCcCcHHHHHHHHHHHcCCcccccccchHHHHHHHHHHhcCCCC
Confidence 11 001112 22222234557777777777777664422 134555555555556677
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhc
Q psy8447 145 ITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTD 201 (229)
Q Consensus 145 I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~ 201 (229)
|+++.+..++.-. ...+. ...-+..+|.++.=-+-++||+.+++.
T Consensus 224 IskDtW~~~l~F~-~~~~~-----------~~~dls~YDe~~AWP~liDeFVe~~~~ 268 (270)
T 3bq3_A 224 ISKDTWRMLLLFF-KRYPT-----------IQKIISDYDETAAWPFIIDEFYECLQD 268 (270)
T ss_dssp EEHHHHHHHHHHH-HHCCS-----------HHHHHHHCCTTSSCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH-HHhcc-----------CCCccccCCccCccHHHHHHHHHHHhc
Confidence 8888888877532 11000 123467777655556889999998764
No 408
>1b8i_A Ultrabithorax, protein (ultrabithorax homeotic protein IV); DNA binding, homeodomain, homeotic proteins, development, specificity; HET: DNA; 2.40A {Drosophila melanogaster} SCOP: a.4.1.1 PDB: 9ant_A*
Probab=65.40 E-value=7.2 Score=24.01 Aligned_cols=46 Identities=11% Similarity=0.006 Sum_probs=35.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+...++..++++...|..|+.
T Consensus 24 Rt~ft~~Ql~~Le~~F~~~---~--y--p~~~~r~~LA~~l~l~~~qV~vWFq 69 (81)
T 1b8i_A 24 RQTYTRYQTLELEKEFHTN---H--Y--LTRRRRIEMAHALSLTERQIKIWFQ 69 (81)
T ss_dssp CCCCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHhcC---C--C--CCHHHHHHHHHHhCCCHHHHHHHhH
Confidence 4678999999999998742 1 1 4455677888999999999988864
No 409
>3a01_A Homeodomain-containing protein; homeodomain, protein-DNA complex, DNA-binding, homeobox, NUC developmental protein; 2.70A {Drosophila melanogaster}
Probab=64.89 E-value=7.4 Score=24.73 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=36.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|..- . . |...+-..++..+++++..|..|+.
T Consensus 21 Rt~ft~~Ql~~Le~~F~~~---~--y--p~~~~r~~LA~~l~L~~~qV~vWFq 66 (93)
T 3a01_A 21 RTSFTRIQVAELEKRFHKQ---K--Y--LASAERAALARGLKMTDAQVKTWFQ 66 (93)
T ss_dssp CCCCCHHHHHHHHHHHHHC---S--C--CCHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHHHcC---C--C--cCHHHHHHHHHHhCCChhhcccccH
Confidence 3678999999999999742 1 2 5556677888999999999988874
No 410
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=64.22 E-value=4.8 Score=28.87 Aligned_cols=28 Identities=11% Similarity=0.027 Sum_probs=23.4
Q ss_pred HHHHHHcCCCCCCcccHHHHHHHHhcCh
Q psy8447 176 ELALRKMDYDKDGKISFQDFQQSVTDEP 203 (229)
Q Consensus 176 ~~~~~~~d~~~dg~Is~~ef~~~~~~~~ 203 (229)
..++..+|++..|.|.|.++..++...+
T Consensus 23 ~~~W~~fDP~ATgfI~~~~L~~~l~~L~ 50 (168)
T 4dck_A 23 YEIWEKFDPEATQFIEYSVLSDFADALS 50 (168)
T ss_dssp HHHHHHHCTTCCSEEEGGGHHHHHHHSC
T ss_pred HHHHHHhCCCCcceeeHHHHHHHHHhcC
Confidence 3478999999999999999999877553
No 411
>2m0c_A Homeobox protein aristaless-like 4; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=63.57 E-value=8.7 Score=23.03 Aligned_cols=47 Identities=17% Similarity=0.174 Sum_probs=36.1
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-+.||..++..|...|..- . . |...+...++..++++...|..|+..
T Consensus 13 Rt~ft~~q~~~Le~~F~~~---~--y--p~~~~r~~La~~l~l~~~qV~~WFqN 59 (75)
T 2m0c_A 13 RTTFTSYQLEELEKVFQKT---H--Y--PDVYAREQLAMRTDLTEARVQVWFQN 59 (75)
T ss_dssp SCSSCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhc---C--C--CCHHHHHHHHHHhCCCHHHHHHHhHH
Confidence 3678999999999999632 1 2 45566778899999999999888743
No 412
>2lk2_A Homeobox protein TGIF1; NESG, structural genomics, northeast structural genomics CON PSI-biology, transcription; NMR {Homo sapiens}
Probab=62.90 E-value=10 Score=24.00 Aligned_cols=49 Identities=12% Similarity=0.140 Sum_probs=37.3
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
.-|+.+.+..|+..|..-..... |+..+-..++..++|+..+|..|+..
T Consensus 10 ~~l~~~~~~iL~~W~~~h~~npY----Ps~~ek~~LA~~tgLt~~QV~~WF~N 58 (89)
T 2lk2_A 10 HMLPKESVQILRDWLYEHRYNAY----PSEQEKALLSQQTHLSTLQVCNWFIN 58 (89)
T ss_dssp CCCCHHHHHHHHHHHHHTSGGGS----CCHHHHHHHHHHSSSCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHhccCCC----CCHHHHHHHHHHHCcCHHHHHHHHHH
Confidence 35788888999998886543333 55677788999999999999887643
No 413
>2da4_A Hypothetical protein DKFZP686K21156; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.69 E-value=3.5 Score=25.36 Aligned_cols=50 Identities=12% Similarity=-0.005 Sum_probs=36.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||.+++..|...|..-... ... |...+...++..++++...|..|+.
T Consensus 12 Rt~ft~~Q~~~Le~~F~~~~~~-~~y--p~~~~r~~La~~lgL~~~qV~vWFq 61 (80)
T 2da4_A 12 RTQFSDRDLATLKKYWDNGMTS-LGS--VCREKIEAVATELNVDCEIVRTWIG 61 (80)
T ss_dssp SCCCCHHHHHHHHHHHTTTTTC-CSH--HHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCCCC-CCC--cCHHHHHHHHHHhCCCHHHhhHhHH
Confidence 3679999999999999643100 011 4455667888999999999988874
No 414
>2l9r_A Homeobox protein NKX-3.1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=61.54 E-value=11 Score=22.58 Aligned_cols=45 Identities=11% Similarity=0.044 Sum_probs=35.0
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
.++|..++..|...|..-. . |...+-..++..+++++..|+.|+.
T Consensus 9 ~~~t~~ql~~LE~~F~~~~-----y--p~~~~r~~LA~~l~Lte~qVqvWFq 53 (69)
T 2l9r_A 9 SHMSHTQVIELERKFSHQK-----Y--LSAPERAHLAKNLKLTETQVKIWFQ 53 (69)
T ss_dssp CCCCHHHHHHHHHHHHHCS-----C--CCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhcCC-----C--CCHHHHHHHHHHhCCChhheeecch
Confidence 5678999999999996322 1 4455677889999999999998874
No 415
>2dmp_A Zinc fingers and homeoboxes protein 2; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.68 E-value=9.7 Score=23.95 Aligned_cols=45 Identities=16% Similarity=0.137 Sum_probs=35.0
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
..+|.+++..|...|..- . . |...+...++..++++..+|+.|+.
T Consensus 18 k~~t~~Ql~~Le~~F~~~---~--y--p~~~~r~~La~~~~l~~~qV~vWFq 62 (89)
T 2dmp_A 18 KEKTQGQVKILEDSFLKS---S--F--PTQAELDRLRVETKLSRREIDSWFS 62 (89)
T ss_dssp CCCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHccC---C--C--CCHHHHHHHHHHhCCCHHhccHhhH
Confidence 448999999999999752 1 1 4456677889999999999988873
No 416
>3nar_A ZHX1, zinc fingers and homeoboxes protein 1; corepressor, homeodomain, structural genomics, oxford production facility, OPPF, transcription; 2.60A {Homo sapiens}
Probab=60.53 E-value=10 Score=24.18 Aligned_cols=47 Identities=13% Similarity=0.225 Sum_probs=35.0
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhc
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKG 63 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 63 (229)
-+.||..++..|...|.. .. . |...+...++..++++..+|+.|+..
T Consensus 29 Rt~ft~~Ql~~Le~~F~~---~~--y--p~~~~r~~LA~~l~L~~~qV~vWFqN 75 (96)
T 3nar_A 29 ICKKTPEQLHMLKSAFVR---TQ--W--PSPEEYDKLAKESGLARTDIVSWFGD 75 (96)
T ss_dssp SSSSCHHHHHHHHHHHHH---CS--S--CCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHH---cC--C--CCHHHHHHHHHHhCCCHHHeeecchh
Confidence 367889999999988863 11 1 44556678888899999888888753
No 417
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB: 3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Probab=60.02 E-value=29 Score=29.51 Aligned_cols=61 Identities=11% Similarity=0.192 Sum_probs=38.9
Q ss_pred HHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHH----HhcCCCCC-cccHHHHHHHHHH
Q psy8447 95 ERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFL----IYDLNNDG-FITREEMFQLLRN 156 (229)
Q Consensus 95 ~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~----~~D~~~~G-~I~~~e~~~~l~~ 156 (229)
..+|..+ .++.+.|+...|+.++....-...+-+++..++ ..+...+| .|+++-|++.+..
T Consensus 71 d~lf~~~-~~~~~~i~~~~f~~~l~~~Gl~~~DpRl~~~~~~l~~~~~~~~~~~~~d~~~F~~~i~~ 136 (534)
T 3uo9_A 71 DLLFYTI-AEGQEKIPVHKFITALKSTGLRTSDPRLKECMDMLRLTLQTTSDGVMLDKDLFKKCVQS 136 (534)
T ss_dssp HHHHHHH-HTTCSSEEHHHHHHHHHHTTCCTTCGGGHHHHHHHHHHHHHCSSTTEECHHHHHHHHGG
T ss_pred HHHHHHH-hCCCcEeeHHHHHHHHHHcCCCCCCchHHHHHHHHHHHhhccCccccccHHHHHHHhhc
Confidence 4467777 556789999999999988665444333333333 23333344 6888888887753
No 418
>2f05_A Paired amphipathic helix protein SIN3B; helix bundle, transcription repressor; NMR {Mus musculus} SCOP: a.59.1.1
Probab=59.98 E-value=18 Score=23.65 Aligned_cols=27 Identities=30% Similarity=0.485 Sum_probs=21.9
Q ss_pred cHHHHHHHHhcChHHHHHhcccCCChH
Q psy8447 191 SFQDFQQSVTDEPLLLEAFGQCLPSDA 217 (229)
Q Consensus 191 s~~ef~~~~~~~~~~~~~~~~~~~~~~ 217 (229)
-+++-..++..+|+++.-|..+||++.
T Consensus 58 V~~~V~~LF~~hpDLl~eFn~FLP~~~ 84 (105)
T 2f05_A 58 VFTEVANLFRGQEDLLSEFGQFLPEAK 84 (105)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHSCGGG
T ss_pred HHHHHHHHHccCHHHHHHHHHHCCCcc
Confidence 445666688899999999999998854
No 419
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=57.70 E-value=69 Score=25.36 Aligned_cols=101 Identities=15% Similarity=0.190 Sum_probs=68.1
Q ss_pred cCCChhHHHHHHhccC-ccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHH
Q psy8447 50 SGLPPSNVTERYKGFS-PFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEE 128 (229)
Q Consensus 50 ~~l~~~~~~~l~~~f~-~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~ 128 (229)
..++..+...+|+..- .... +.=.+|...+....+..+..+ ...+=...|...++.|+..||-.+...+.. .+.
T Consensus 157 frItK~~A~eFW~~~FG~r~i--VpW~~F~~~L~~~~~i~sg~~-~laLK~tiDlT~~d~VSifeFdvFtr~FqP-w~~- 231 (329)
T 3bux_B 157 FRITKADAAEFWRKAFGEKTI--VPWKSFRQALHEVHPISSGLE-AMALKSTIDLTCNDYISVFEFDIFTRLFQP-WSS- 231 (329)
T ss_dssp CCCSSHHHHHHHHHHHTTCSE--EEHHHHHHHHHHHSCCCCHHH-HHHHHHHHCTTCSSEEEHHHHHHHHHHTCC-GGG-
T ss_pred eeecChHHHHHHHHhCCCCcC--CcHHHHHHHHHHhCCCCCCch-hhhhhheeCCCcCCceeeeecccHHHhhCc-hHH-
Confidence 3456666666655432 2222 677888888888766554433 344445788899999999999998887632 221
Q ss_pred HHHHHHHHhcCCCCC---cccHHHHHHHHHH
Q psy8447 129 LIKFTFLIYDLNNDG---FITREEMFQLLRN 156 (229)
Q Consensus 129 ~~~~~F~~~D~~~~G---~I~~~e~~~~l~~ 156 (229)
+..-|+.+-....| .||++|..+.|..
T Consensus 232 -ll~nw~~la~~hpGy~aFlTydEv~~~L~~ 261 (329)
T 3bux_B 232 -LLRNWNSLAVTHPGYMAFLTYDEVKARLQK 261 (329)
T ss_dssp -HHHHHHHHTTSCTTBCTTCCHHHHHHHHGG
T ss_pred -HHHHHHHHHhcCcchhheeeHHHHHHHHHH
Confidence 22344556778888 9999999999976
No 420
>2r5y_A Homeotic protein sex combs reduced; homeodomain; HET: DNA; 2.60A {Drosophila melanogaster} PDB: 2r5z_A*
Probab=56.30 E-value=8.1 Score=24.16 Aligned_cols=46 Identities=11% Similarity=0.021 Sum_probs=32.6
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|.. +.. |...+...++..++++...|..|+.
T Consensus 32 Rt~ft~~Ql~~Le~~F~~-----~~y--p~~~~r~~La~~l~l~~~qV~vWFq 77 (88)
T 2r5y_A 32 RTSYTRYQTLELEKEFHF-----NRY--LTRRRRIEIAHALSLTERQIKIWFQ 77 (88)
T ss_dssp CCCCCHHHHHHHHHHHTT-----CSS--CCHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHhc-----cCC--CCHHHHHHHHHHhCcCHHHhhHHhH
Confidence 367888888888888852 111 4455667788888888888887763
No 421
>2ecb_A Zinc fingers and homeoboxes protein 1; homeobox domain, transcription factor, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=55.61 E-value=13 Score=23.47 Aligned_cols=46 Identities=9% Similarity=0.070 Sum_probs=35.6
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
...+|.+++..|...|..- . . |...+-..++..++|++.+|+.|+.
T Consensus 15 ~k~~t~~Ql~~Le~~F~~~---~--y--p~~~~r~~LA~~lgLte~qVkvWFq 60 (89)
T 2ecb_A 15 FKEKTAEQLRVLQASFLNS---S--V--LTDEELNRLRAQTKLTRREIDAWFT 60 (89)
T ss_dssp CCCCCHHHHHHHHHHHHHC---S--S--CCHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHhc---C--C--CCHHHHHHHHHHhCcChHHCeeccc
Confidence 3478999999999998531 2 2 5566777899999999999988764
No 422
>1b72_A Protein (homeobox protein HOX-B1); homeodomain, DNA, complex, DNA-binding protein, protein/DNA complex; HET: DNA; 2.35A {Homo sapiens} SCOP: a.4.1.1
Probab=55.35 E-value=8 Score=24.73 Aligned_cols=46 Identities=11% Similarity=0.022 Sum_probs=31.4
Q ss_pred cCcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 10 LPLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 10 ~~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
-+.||..++..|...|.. ... |...+...++..++++..+|+.|+.
T Consensus 38 Rt~ft~~Ql~~Le~~F~~-----~~y--p~~~~r~~LA~~l~l~~~qV~vWFq 83 (97)
T 1b72_A 38 RTNFTTRQLTELEKEFHF-----NKY--LSRARRVEIAATLELNETQVKIWFQ 83 (97)
T ss_dssp CCCCCHHHHHHHHHHHTT-----CSS--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHHhc-----cCC--CCHHHHHHHHHHhCCCHHHhHHHHH
Confidence 356888888888877753 111 4455566777888888888877763
No 423
>3d1n_I POU domain, class 6, transcription factor 1; protein-DNA complex, helix-turn-helix (HTH), DNA-binding, homeobox, nucleus, transcription regulation; 2.51A {Homo sapiens}
Probab=51.97 E-value=18 Score=25.14 Aligned_cols=45 Identities=16% Similarity=0.147 Sum_probs=30.8
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.|+..++..|...|.. .+. |...+...++..+++++..|..|+.
T Consensus 98 t~ft~~q~~~Le~~F~~-----~~y--p~~~~r~~LA~~l~L~~~qV~vWFq 142 (151)
T 3d1n_I 98 TSFTPQAIEALNAYFEK-----NPL--PTGQEITEMAKELNYDREVVRVWFS 142 (151)
T ss_dssp CCCCHHHHHHHHHHHHH-----CSS--CCHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHh-----cCC--CCHHHHHHHHHHHCCCHHHhHHHHH
Confidence 56778888888777765 111 4455566777788888887777763
No 424
>2cuf_A FLJ21616 protein; homeobox domain, hepatocyte transcription factor, structural genomics, loop insertion, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=51.42 E-value=17 Score=23.07 Aligned_cols=44 Identities=7% Similarity=0.097 Sum_probs=29.6
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcC---------------CChhHHHHHH
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSG---------------LPPSNVTERY 61 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~---------------l~~~~~~~l~ 61 (229)
+.|++.++..|...|.. ... |...+...++..++ +++..|..|+
T Consensus 12 ~~ft~~ql~~Le~~F~~---~~y----P~~~~r~~lA~~l~~~~~~~~~~~~~~~~ls~~qV~~WF 70 (95)
T 2cuf_A 12 FTWRKECLAVMESYFNE---NQY----PDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWF 70 (95)
T ss_dssp CCCCHHHHHHHHHHHHH---CSS----CCHHHHHHHHHHHHHHHCCTTCCCCTTTCCCHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhc---CCC----CCHHHHHHHHHHHCchhhcccccccccCcCCHHHHHHHH
Confidence 57889999999888886 122 44445556666666 6666666665
No 425
>3bux_B E3 ubiquitin-protein ligase CBL; TKB, signal transduction, proto-oncogene, complex, ATP-binding, glycoprotein, kinase, membrane, nucleotide-binding; HET: PTR; 1.35A {Homo sapiens} SCOP: a.39.1.7 a.48.1.1 d.93.1.1 PDB: 1yvh_A* 3bun_B* 3buo_B* 3bum_B* 3buw_B* 3ob1_B* 3ob2_B* 3plf_B* 2cbl_A* 1b47_A 3pfv_A*
Probab=50.32 E-value=93 Score=24.64 Aligned_cols=95 Identities=7% Similarity=-0.019 Sum_probs=64.5
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+...|+..-.++. .|.|.+|...+..............+=..+|.-.+++|+..||..+++-++... .
T Consensus 164 A~eFW~~~FG~r~-iVpW~~F~~~L~~~~~i~sg~~~laLK~tiDlT~~d~VSifeFdvFtr~FqPw~--------~--- 231 (329)
T 3bux_B 164 AAEFWRKAFGEKT-IVPWKSFRQALHEVHPISSGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWS--------S--- 231 (329)
T ss_dssp HHHHHHHHHTTCS-EEEHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCCGG--------G---
T ss_pred HHHHHHHhCCCCc-CCcHHHHHHHHHHhCCCCCCchhhhhhheeCCCcCCceeeeecccHHHhhCchH--------H---
Confidence 5555655444343 599999999999977654443333344478999999999999999997653211 1
Q ss_pred HHHHHHHHcCCCCCC---cccHHHHHHHHhc
Q psy8447 174 LVELALRKMDYDKDG---KISFQDFQQSVTD 201 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg---~Is~~ef~~~~~~ 201 (229)
.-..++..-.+..| .|||+|-.+.+..
T Consensus 232 -ll~nw~~la~~hpGy~aFlTydEv~~~L~~ 261 (329)
T 3bux_B 232 -LLRNWNSLAVTHPGYMAFLTYDEVKARLQK 261 (329)
T ss_dssp -HHHHHHHHTTSCTTBCTTCCHHHHHHHHGG
T ss_pred -HHHHHHHHHhcCcchhheeeHHHHHHHHHH
Confidence 12233334566777 8999998887765
No 426
>1au7_A Protein PIT-1, GHF-1; complex (DNA-binding protein/DNA), pituitary, CPHD, POU domain, transcription factor, transcription/DNA complex; HET: DNA; 2.30A {Rattus norvegicus} SCOP: a.4.1.1 a.35.1.1
Probab=47.52 E-value=25 Score=24.37 Aligned_cols=44 Identities=14% Similarity=0.071 Sum_probs=26.1
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHH
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERY 61 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 61 (229)
+.||..++..|...|..- +. |...+...++..+++++..|+.|+
T Consensus 92 t~ft~~Q~~~Le~~F~~~-----~y--p~~~~r~~LA~~l~L~~~qV~vWF 135 (146)
T 1au7_A 92 TTISIAAKDALERHFGEH-----SK--PSSQEIMRMAEELNLEKEVVRVWF 135 (146)
T ss_dssp CCCCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHc-----CC--CCHHHHHHHHHHhCCChhhchhhh
Confidence 456667777766666541 11 334445566666777776666665
No 427
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=45.65 E-value=6.6 Score=31.19 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=41.4
Q ss_pred HccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhh
Q psy8447 101 FDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLI 159 (229)
Q Consensus 101 ~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~ 159 (229)
-|.++||.|+..+...+...+........ .-+..|.|.||.|+.+++.-+-+.++.
T Consensus 250 GDvn~D~~i~i~D~~~i~~~~~~~~~~~~---~~~~~DlN~DG~in~~Di~~v~k~f~~ 305 (321)
T 3kcp_A 250 GDIVKDNSINLLDVAEVIRCFNATKGSAN---YVEELDINRNGAINMQDIMIVHKHFGA 305 (321)
T ss_dssp EECSSSSBCCHHHHHHHHTTTTCBTTSTT---CCGGGCTTCSSBCSHHHHHHHHTTTTC
T ss_pred ccccCCCcccHHHHHHHHHHhccccCCcc---ccccccccccCcccHHHHHHHHHHhcc
Confidence 46789999999999998888764211110 116789999999999999888776543
No 428
>1e3o_C Octamer-binding transcription factor 1; transcription factor, POU domain, dimer, DNA binding; 1.9A {Homo sapiens} SCOP: a.4.1.1 a.35.1.1 PDB: 1gt0_C 1hf0_A* 1cqt_A* 1o4x_A 1oct_C* 1pou_A 1pog_A 1hdp_A
Probab=45.21 E-value=27 Score=24.53 Aligned_cols=44 Identities=11% Similarity=0.079 Sum_probs=26.4
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHH
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERY 61 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 61 (229)
+.||..++..|...|..- .. |...+...++..+++++..|+.|+
T Consensus 106 t~ft~~Q~~~Le~~F~~~-----~y--p~~~~r~~LA~~l~L~~~qV~vWF 149 (160)
T 1e3o_C 106 TSIETNIRVALEKSFMEN-----QK--PTSEDITLIAEQLNMEKEVIRVWF 149 (160)
T ss_dssp CCCCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred cccCHHHHHHHHHHHhhc-----CC--CCHHHHHHHHHHHCCChHHhhHhh
Confidence 456677777776666541 11 334455566667777777666665
No 429
>2xsd_C POU domain, class 3, transcription factor 1; transcription-DNA complex, SOX; 2.05A {Mus musculus}
Probab=43.36 E-value=28 Score=24.67 Aligned_cols=44 Identities=14% Similarity=-0.019 Sum_probs=27.0
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHH
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERY 61 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 61 (229)
+.||..++..|...|... .. |...+...++..+++++..|+.|+
T Consensus 104 t~ft~~Ql~~LE~~F~~~-----~y--p~~~~r~~LA~~l~L~~~qV~vWF 147 (164)
T 2xsd_C 104 TSIEVGVKGALESHFLKC-----PK--PSAHEITGLADSLQLEKEVVRVWF 147 (164)
T ss_dssp --CCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHHTCCHHHHHHHH
T ss_pred eeccHHHHHHHHHHHhcC-----CC--CCHHHHHHHHHHHCCChhhhhhhh
Confidence 567777777777777541 11 444555667777777777777665
No 430
>2d5v_A Hepatocyte nuclear factor 6; transcription factor, transcription-DNA complex; 2.00A {Rattus norvegicus} PDB: 1s7e_A
Probab=40.31 E-value=27 Score=24.59 Aligned_cols=45 Identities=24% Similarity=0.219 Sum_probs=31.0
Q ss_pred CcCcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 11 PLSFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 11 ~~~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
+.||..++..|...|..- .. |....-..++..++++...|..|+.
T Consensus 102 t~ft~~q~~~Le~~F~~~-----~y--p~~~~r~~la~~l~L~~~qV~~WFq 146 (164)
T 2d5v_A 102 LVFTDVQRRTLHAIFKEN-----KR--PSKELQITISQQLGLELSTVSNFFM 146 (164)
T ss_dssp CCCCHHHHHHHHHHHHHC-----SS--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhcC-----CC--CCHHHHHHHHHHHCcCHHHhhhcCh
Confidence 567888888888777643 11 4455566777888888888877764
No 431
>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}
Probab=39.77 E-value=1.4e+02 Score=23.58 Aligned_cols=94 Identities=11% Similarity=-0.047 Sum_probs=62.2
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+...++..-.++ -.|.|.+|...+.....-........+=..+|.-.+|+|+..||..+++-++... .
T Consensus 149 A~~FWk~~FG~r-~iVpW~~F~~~l~~~~~i~s~~~~~aLk~tiDlT~~~~VSifeFdvFtrlFqPw~-----------~ 216 (323)
T 3op0_A 149 AHTFWRESCGAR-CVLPWAEFESLLGTCHPVEPGATALALRTTIDLTCSGHVSIFEFDVFTRLFQPWP-----------T 216 (323)
T ss_dssp HHHHHHHHHTTC-SEEEHHHHHHHHHTTSCCCTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCCGG-----------G
T ss_pred HHHHHHHhcCCC-ceecHHHHHHHHHHhcCCCCcchHHHHHHhcccccCCceeeeecchHHHhhCcCH-----------H
Confidence 455554433333 3599999999999877654444444455788999999999999999997653211 1
Q ss_pred HHHHHHHHcCCCC---CCcccHHHHHHHHh
Q psy8447 174 LVELALRKMDYDK---DGKISFQDFQQSVT 200 (229)
Q Consensus 174 ~~~~~~~~~d~~~---dg~Is~~ef~~~~~ 200 (229)
.++.+... -.+. -|.|||+|-.+.+.
T Consensus 217 lL~nw~~l-av~hpGy~aFlTydEV~~~L~ 245 (323)
T 3op0_A 217 LLKNWQLL-AVNHPGYMAFLTYDEVQERLQ 245 (323)
T ss_dssp HHHHHHHH-TTTCTTBCTTCCHHHHHHHTT
T ss_pred HhhhHHHH-hhcCcceeeeeeHHHHHHHHH
Confidence 23433333 2233 46799999888766
No 432
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=39.65 E-value=21 Score=22.47 Aligned_cols=25 Identities=28% Similarity=0.537 Sum_probs=20.9
Q ss_pred HHHHHHHHhcChHHHHHhcccCCCh
Q psy8447 192 FQDFQQSVTDEPLLLEAFGQCLPSD 216 (229)
Q Consensus 192 ~~ef~~~~~~~~~~~~~~~~~~~~~ 216 (229)
+++...++..+|+++.-|.+.+|++
T Consensus 65 ~~~V~~LF~~h~DLl~~F~~FLP~~ 89 (89)
T 1g1e_B 65 YAQVARLFKNQEDLLSEFGQFLPDA 89 (89)
T ss_dssp HHHHHHHTTTCHHHHHHHHTTCCCC
T ss_pred HHHHHHHHccCHHHHHHHHHHCcCC
Confidence 4566778889999999999999864
No 433
>3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens}
Probab=38.73 E-value=1.4e+02 Score=23.48 Aligned_cols=102 Identities=17% Similarity=0.175 Sum_probs=66.9
Q ss_pred CCChhHHHHHHh-ccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHH
Q psy8447 51 GLPPSNVTERYK-GFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEEL 129 (229)
Q Consensus 51 ~l~~~~~~~l~~-~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 129 (229)
.++..+...+|+ .|..... +.=.+|...+....+..+..+ ...+=..+|...+|.|+..||-.+...+.. .+ ..
T Consensus 143 ~itk~~A~~FWk~~FG~r~i--VpW~~F~~~l~~~~~i~s~~~-~~aLk~tiDlT~~~~VSifeFdvFtrlFqP-w~-~l 217 (323)
T 3op0_A 143 QLTKAPAHTFWRESCGARCV--LPWAEFESLLGTCHPVEPGAT-ALALRTTIDLTCSGHVSIFEFDVFTRLFQP-WP-TL 217 (323)
T ss_dssp CCSSHHHHHHHHHHHTTCSE--EEHHHHHHHHHTTSCCCTTHH-HHHHHHHHCTTCSSEEEHHHHHHHHHHTCC-GG-GH
T ss_pred EEcChHHHHHHHHhcCCCce--ecHHHHHHHHHHhcCCCCcch-HHHHHHhcccccCCceeeeecchHHHhhCc-CH-HH
Confidence 455555555553 3442222 778889888888766444333 344557789999999999999998887632 22 23
Q ss_pred HHHHHHH-hcCCC-CCcccHHHHHHHHHHH
Q psy8447 130 IKFTFLI-YDLNN-DGFITREEMFQLLRNS 157 (229)
Q Consensus 130 ~~~~F~~-~D~~~-~G~I~~~e~~~~l~~~ 157 (229)
++....+ ....| -|.||++|....|...
T Consensus 218 L~nw~~lav~hpGy~aFlTydEV~~~L~~~ 247 (323)
T 3op0_A 218 LKNWQLLAVNHPGYMAFLTYDEVQERLQAC 247 (323)
T ss_dssp HHHHHHHTTTCTTBCTTCCHHHHHHHTTGG
T ss_pred hhhHHHHhhcCcceeeeeeHHHHHHHHHHh
Confidence 4444444 33332 6789999999999843
No 434
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=37.43 E-value=85 Score=20.49 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=39.0
Q ss_pred eeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCC--CcccHHHHHHHHHHHhhcCCCCCCChHHHHHH
Q psy8447 109 IHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNND--GFITREEMFQLLRNSLISHPQDEDPDEGVRDL 174 (229)
Q Consensus 109 I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~--G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~ 174 (229)
|.-.+|..++..+....+++++..+-..+..++. +.|+..++..++..+-...+ +++.++.+
T Consensus 28 VP~~Dy~PLlALL~R~Ltddev~~Va~~L~~~~~~~~pi~~~dI~~~It~vT~~~P----~~eDi~RV 91 (107)
T 3ol3_A 28 VPPKDYFALLALLKRSLTEDEVVRAAQAILRSTDGQSPVTDDDIRNAVHQIIEKEP----TAEEINQV 91 (107)
T ss_dssp BCGGGHHHHHHHHTCCCCHHHHHHHHHHHHHHCCSSSCBCHHHHHHHHHHHHSSCC----CHHHHHHH
T ss_pred CCCCccHHHHHHhcccCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHhcCCc----CHHHHHHH
Confidence 4555666677766666777766665555544333 35889999888887755444 45555543
No 435
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.20 E-value=28 Score=20.93 Aligned_cols=44 Identities=18% Similarity=0.259 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHhccC
Q psy8447 15 RQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYKGFS 65 (229)
Q Consensus 15 ~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~f~ 65 (229)
.+.+..|+..|..... |+..+...++..++|+.+-|+.|+....
T Consensus 14 k~ql~~Lk~yF~~n~~-------Ps~eei~~LA~~lgL~~~VVrVWFqNrR 57 (71)
T 2da7_A 14 KDHMSVLKAYYAMNME-------PNSDELLKISIAVGLPQEFVKEWFEQRK 57 (71)
T ss_dssp THHHHHHHHHHHHCSS-------CCHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-------CCHHHHHHHHHHhCCCHHHHHHHHhhcc
Confidence 3456666666664332 6677889999999999999999886643
No 436
>2kzs_A Death-associated protein 6; helical bundle,DHB domain, FAS death-domain associated prote rassf1C interacting domain, apoptosis; NMR {Homo sapiens} PDB: 2kzu_A
Probab=34.91 E-value=35 Score=21.43 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=33.4
Q ss_pred HHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 111 LDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 111 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
|+||+..+.....+-+ +.+..+-..+-.-..-+++..||++.|...+
T Consensus 17 feEFv~~C~~~t~d~P-eV~~fL~~r~~kas~~fL~SveF~n~L~rcL 63 (94)
T 2kzs_A 17 FEEFLELCKMQTADHP-EVVPFLYNRQQRAHSLFLASAEFCNILSRVL 63 (94)
T ss_dssp HHHHHHHHHHHCTTCT-THHHHHHHHHHTBCHHHHTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCc-HHHHHHHHHhccCCchhhhHHHHHHHHHHHH
Confidence 6788888876655555 5566666666666667888899888887653
No 437
>2e19_A Transcription factor 8; homeobox domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.11 E-value=27 Score=20.25 Aligned_cols=43 Identities=12% Similarity=0.251 Sum_probs=31.3
Q ss_pred CcHHHHHHHHHHHHHHhhcCCCCCCCCCCchhhhHhhcCCChhHHHHHHh
Q psy8447 13 SFRQEVETLCKIFKKLLNSSSNAGVPISTSTPVVVQVSGLPPSNVTERYK 62 (229)
Q Consensus 13 ~~~~~i~~l~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 62 (229)
.+.+++..|...|.. .. . |...+...++..+++++..|+.|+.
T Consensus 10 p~~~Ql~~Le~~F~~---~~--y--p~~~~r~~LA~~l~L~e~qVqvWFq 52 (64)
T 2e19_A 10 PLKNLLSLLKAYYAL---NA--Q--PSAEELSKIADSVNLPLDVVKKWFE 52 (64)
T ss_dssp CCHHHHHHHHHHHTT---CS--S--CCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhc---CC--C--cCHHHHHHHHHHhCcChhhcCcchh
Confidence 457788888888852 11 2 4455677888999999999988874
No 438
>2ld7_B Paired amphipathic helix protein SIN3A; transcription; NMR {Mus musculus}
Probab=32.97 E-value=17 Score=22.09 Aligned_cols=30 Identities=23% Similarity=0.185 Sum_probs=20.7
Q ss_pred CCcccHHHHHH----HHhcChHHHHHhcccCCCh
Q psy8447 187 DGKISFQDFQQ----SVTDEPLLLEAFGQCLPSD 216 (229)
Q Consensus 187 dg~Is~~ef~~----~~~~~~~~~~~~~~~~~~~ 216 (229)
.+.|+..+... ++..+|.++..|...++..
T Consensus 40 q~~Id~~eLv~~V~~~lg~~pdL~~~Fk~Fl~~~ 73 (75)
T 2ld7_B 40 QEVISRAELVQLVSPFLGKFPELFNWFKNFLGYK 73 (75)
T ss_dssp TTCSCHHHHHHHTHHHHTTCHHHHHHHHHHHTCC
T ss_pred hcCcCHHHHHHHHHHHHccCHHHHHHHHHHcCCC
Confidence 45566666655 4558899999888877654
No 439
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=32.02 E-value=63 Score=21.29 Aligned_cols=60 Identities=13% Similarity=0.083 Sum_probs=36.5
Q ss_pred eeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHH
Q psy8447 109 IHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDL 174 (229)
Q Consensus 109 I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~ 174 (229)
|--.++..++..+....+++++..+-..+-.+ |.|+..|+..++..+-...+ +++.+..+
T Consensus 25 VP~~Dy~PLLALL~r~Ltdeev~~Va~~L~~~--~~i~~~dI~~~I~~vt~~~P----s~eDI~RV 84 (112)
T 2lky_A 25 VPGPDRVPLLALLTRRLTNDEIKAIAEDLEKR--AHFDHIDIGVLITQMTDEMP----REEDIERV 84 (112)
T ss_dssp CCHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH--CCCSCCCSHHHHHHHTTCCC----CHHHHHHH
T ss_pred CCCcchHHHHHHHcccCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHhccCC----CHHHHHHH
Confidence 55566666666666666666666655555433 34888888888777654433 44455543
No 440
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=31.99 E-value=93 Score=19.31 Aligned_cols=20 Identities=10% Similarity=0.125 Sum_probs=16.1
Q ss_pred CCCCCcccHHHHHHHHHHHh
Q psy8447 139 LNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 139 ~~~~G~I~~~e~~~~l~~~~ 158 (229)
..+++.|+.+++.+++.+++
T Consensus 62 ~e~~~~le~e~LEki~pQLl 81 (84)
T 4dra_E 62 AEDALRVDVDQLEKVLPQLL 81 (84)
T ss_dssp HTTCSSBCHHHHHHHHHHHH
T ss_pred hcCCCcccHHHHHHHHHHHh
Confidence 35788999999999887763
No 441
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=31.61 E-value=92 Score=19.15 Aligned_cols=65 Identities=15% Similarity=0.020 Sum_probs=34.6
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHh
Q psy8447 93 LMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSL 158 (229)
Q Consensus 93 ~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~ 158 (229)
.+.+||..+-.+.+-+|+-+-...... +..-...+-+.++-.....++.+.|+.+++.+++.+++
T Consensus 13 lI~ril~~~f~~~ktrI~~dAl~l~ae-yl~iFV~EAv~RA~~~a~~e~~~~le~~~LEki~pqLl 77 (81)
T 3b0b_C 13 TVERLLRLHFRDGRTRVNGDALLLMAE-LLKVFVREAAARAARQAQAEDLEKVDIEHVEKVLPQLL 77 (81)
T ss_dssp HHHHHHHHHCCSTTCEECHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcccccHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCeecHHHHHHHHHHHH
Confidence 355566555444455665543322221 11111123333333333456788999999999988764
No 442
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A
Probab=29.90 E-value=32 Score=25.29 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=24.1
Q ss_pred CChHHHHHHHHHHHHHcCCCCCCcccHHHHHH
Q psy8447 166 DPDEGVRDLVELALRKMDYDKDGKISFQDFQQ 197 (229)
Q Consensus 166 ~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~ 197 (229)
++++.++.+++.+++.++.|+.|+++|.-+..
T Consensus 4 ~~~~~v~~~v~~~l~~~~~D~~g~~DyAl~s~ 35 (198)
T 4dxt_A 4 VTEEQVHHIVKQALQRYSEDRIGLADYALESG 35 (198)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTTCCCCTTCGGG
T ss_pred CCHHHHHHHHHHHHHHHhccccCCcCeEcccC
Confidence 35666777788888999999998888765443
No 443
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=28.42 E-value=55 Score=21.59 Aligned_cols=59 Identities=12% Similarity=0.198 Sum_probs=36.2
Q ss_pred HHHHHHhhccCChHHHHHHHHHHhcCCCC-----CcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHH
Q psy8447 114 WVLGLSCFLRGTNEELIKFTFLIYDLNND-----GFITREEMFQLLRNSLISHPQDEDPDEGVRDLVE 176 (229)
Q Consensus 114 f~~~~~~~~~~~~~~~~~~~F~~~D~~~~-----G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~ 176 (229)
|..++..+.+..+++++..+-..+-.+++ +.|+..++..++..+-...+ +++.+..+..
T Consensus 30 y~PLLALL~R~LtdeEV~~Va~~L~~~~~~~~~~~~i~~~dI~v~It~VT~e~P----~peDI~RV~a 93 (112)
T 2m0n_A 30 RFPLLALLRRTLTEEQVQEVVAKLTDPESSAQIDGVVSKDEIEKFIADVTKDEP----TAQDISRVAS 93 (112)
T ss_dssp CCGGGGCCCSSCCHHHHHHHHHHHTCTTTHHHHTSCCCTTHHHHHHHHTTTCCC----CHHHHHHHHH
T ss_pred cHHHHHHhhccCCHHHHHHHHHHHHhccCcccCCCCCCHHHHHHHHHHHhccCc----CHHHHHHHHH
Confidence 33444445555666777666666655544 57899999888887644333 5556655433
No 444
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=28.39 E-value=59 Score=21.09 Aligned_cols=59 Identities=10% Similarity=-0.059 Sum_probs=33.0
Q ss_pred eeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 109 IHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 109 I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
|.-.++..++..+....+++++..+-..+-.++ .|+..|+..++..+-. +.-+++.+..
T Consensus 23 VP~~Dy~PLlALL~r~Ltdeev~~Va~~L~~~~--~i~~~dI~~~I~~vt~----~~Ps~eDI~R 81 (103)
T 2kvc_A 23 IPPTDSFAVLALLCRRLSHDEVKAVANELMRLG--DFDQIDIGVVITHFTD----ELPSPEDVER 81 (103)
T ss_dssp CCHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHT--SSCSSCHHHHHHSCCS----SCSCHHHHHH
T ss_pred CCCcchHHHHHHHhccCCHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHhc----cCCCHHHHHH
Confidence 455556666666655666666665555554332 3777777777765433 2234445444
No 445
>3nph_B Phycobilisome 32.1 kDa linker polypeptide, phycoc associated, ROD 2; PFAM00427 domain, linker protein, phycobiliprotein, photosyn; 1.85A {Synechocystis SP} PDB: 2l3w_A
Probab=27.94 E-value=85 Score=21.82 Aligned_cols=23 Identities=26% Similarity=0.414 Sum_probs=18.6
Q ss_pred CCcccHHHHHHHHhcChHHHHHh
Q psy8447 187 DGKISFQDFQQSVTDEPLLLEAF 209 (229)
Q Consensus 187 dg~Is~~ef~~~~~~~~~~~~~~ 209 (229)
+|.||..||++.+.+.+.+.+.|
T Consensus 47 nG~ItVReFVR~LakSe~Yr~~f 69 (148)
T 3nph_B 47 GREISVRDFVRAVALSEVYRQKF 69 (148)
T ss_dssp TTSSCHHHHHHHHHTSHHHHHHH
T ss_pred cCCccHHHHHHHHHccHHHHHHh
Confidence 68899999999998887755544
No 446
>2czy_A Paired amphipathic helix protein SIN3B; SIN3, PAH1, transcriptional repressor, gene regulation; NMR {Mus musculus}
Probab=27.63 E-value=1e+02 Score=18.54 Aligned_cols=24 Identities=25% Similarity=0.418 Sum_probs=19.1
Q ss_pred HHHHHHHhcChHHHHHhcccCCCh
Q psy8447 193 QDFQQSVTDEPLLLEAFGQCLPSD 216 (229)
Q Consensus 193 ~ef~~~~~~~~~~~~~~~~~~~~~ 216 (229)
++-..++..+|+++.-|...+|++
T Consensus 47 ~rv~~Lf~~hpdLi~gFn~FLP~~ 70 (77)
T 2czy_A 47 RRVSQLFHEHPDLIVGFNAFLPLG 70 (77)
T ss_dssp HHHHHHTTTCHHHHHHHHTTSCSS
T ss_pred HHHHHHHcCCHHHHHHHHHHCCCC
Confidence 344456778999999999999875
No 447
>2cr7_A Paired amphipathic helix protein SIN3B; paired amphipathic helix repeat, transcriptional repressor, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rmr_A 2rms_A
Probab=27.40 E-value=94 Score=18.94 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=19.1
Q ss_pred HHHHHHHhcChHHHHHhcccCCCh
Q psy8447 193 QDFQQSVTDEPLLLEAFGQCLPSD 216 (229)
Q Consensus 193 ~ef~~~~~~~~~~~~~~~~~~~~~ 216 (229)
++-..++..+|+++.-|...+|++
T Consensus 53 ~rV~~Lf~~hpdLi~gFn~FLP~~ 76 (80)
T 2cr7_A 53 RRVSQLFHEHPDLIVGFNAFLPSG 76 (80)
T ss_dssp HHHHHHGGGCHHHHHHHHHHSSCS
T ss_pred HHHHHHHcCCHHHHHHHHHHCcCC
Confidence 344557778999999999999864
No 448
>2k9m_A RNA polymerase sigma factor RPON; core binding domain, transcription; NMR {Aquifex aeolicus}
Probab=27.18 E-value=26 Score=23.79 Aligned_cols=42 Identities=12% Similarity=0.032 Sum_probs=25.0
Q ss_pred CchhhhHhhcCCChhHHHHHHhccCccCCCCCCHHHHHHHHh
Q psy8447 41 TSTPVVVQVSGLPPSNVTERYKGFSPFSFQGLDRVVFRELLH 82 (229)
Q Consensus 41 ~~~~~~~~~~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~ 82 (229)
.+...+....+.+..+++.+++....+++.||...++.+++.
T Consensus 40 ~~l~eia~~l~~~~~eve~vL~~iQ~~dP~GVgArdL~ECLl 81 (130)
T 2k9m_A 40 KSVEEISDVLRCSVEELEKVRQKVLRLEPLGVCSKDVWEFLE 81 (130)
T ss_dssp SCHHHHHHHTTCCHHHHHHHHHHHHTSSSCCTTTSCTTHHHH
T ss_pred CCHHHHHHHcCCCHHHHHHHHHHHhcCCCCccccCCHHHHHH
Confidence 445556666666666666666666666666655444444443
No 449
>3ohw_B Phycobilisome LCM core-membrane linker polypeptid; structural genomics, PSI-biology; 2.70A {Synechocystis SP}
Probab=27.15 E-value=89 Score=21.71 Aligned_cols=23 Identities=17% Similarity=0.517 Sum_probs=18.4
Q ss_pred CCcccHHHHHHHHhcChHHHHHh
Q psy8447 187 DGKISFQDFQQSVTDEPLLLEAF 209 (229)
Q Consensus 187 dg~Is~~ef~~~~~~~~~~~~~~ 209 (229)
+|.||..||++.+...+.+.+-|
T Consensus 59 nG~IsVReFVR~LakS~~Yr~~f 81 (148)
T 3ohw_B 59 NNEINVKEFIEGLGTSELYMKEF 81 (148)
T ss_dssp TTSSCHHHHHHHHHTSHHHHHHH
T ss_pred cCCcCHHHHHHHHHcCHHHHHHh
Confidence 68899999999998877655443
No 450
>3te3_A Polycystic kidney disease 2-like 1 protein; trimeric coiled-coil, oligomerization domain, C-terminal CYT regulatory domain, metal transport; 2.69A {Homo sapiens}
Probab=26.92 E-value=74 Score=16.58 Aligned_cols=16 Identities=38% Similarity=0.779 Sum_probs=13.1
Q ss_pred CcccHHHHHHHHHHHh
Q psy8447 143 GFITREEMFQLLRNSL 158 (229)
Q Consensus 143 G~I~~~e~~~~l~~~~ 158 (229)
+.++.+||..+.+.+.
T Consensus 2 ~~Vs~eeF~~L~rRVl 17 (39)
T 3te3_A 2 GWVSGEEFYMLTRRVL 17 (39)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHH
Confidence 5689999999888764
No 451
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=24.96 E-value=2.8e+02 Score=22.61 Aligned_cols=103 Identities=15% Similarity=0.141 Sum_probs=68.5
Q ss_pred cCCChhHHHHHHhccCccCCCCCCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHH
Q psy8447 50 SGLPPSNVTERYKGFSPFSFQGLDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEEL 129 (229)
Q Consensus 50 ~~l~~~~~~~l~~~f~~~d~~~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~ 129 (229)
..++..+...+|+..-....- +.=.+|...+....+..+..+ ...+=..+|...++.|+..||-.+...+.. -. .
T Consensus 133 ~~i~k~~A~~fW~~~fg~~~~-v~W~~f~~~~~~~~~~~~~~~-~~~lk~~~~~t~~~~vs~~~f~~f~~~f~p--~~-~ 207 (389)
T 2y1n_A 133 FRITKADAAEFWRKAFGEKTI-VPWKSFRQALHEVHPISSGLE-AMALKSTIDLTCNDYISVFEFDIFTRLFQP--WS-S 207 (389)
T ss_dssp CCCSSHHHHHHHHHHHTTCSE-EEHHHHHHHHHTTSCCCCHHH-HHHHHHHHCTTCSSEEEHHHHHHHHHHTCC--GG-G
T ss_pred eEecChHHHHHHHHhCCCCee-eeHHHHHHHHHHhcCCCCCch-hhhHhhccCcccCCccchhhhchHHHHhcc--HH-H
Confidence 456666666666543321111 677788888888766544433 344556688889999999999988887632 11 2
Q ss_pred HHHHHHHhcCCCCC---cccHHHHHHHHHHH
Q psy8447 130 IKFTFLIYDLNNDG---FITREEMFQLLRNS 157 (229)
Q Consensus 130 ~~~~F~~~D~~~~G---~I~~~e~~~~l~~~ 157 (229)
+..-+........| +++++|+.+.+...
T Consensus 208 l~~~~~~~~~~hpg~~af~ty~ev~~~Lk~~ 238 (389)
T 2y1n_A 208 LLRNWNSLAVTHPGYMAFLTYDEVKARLQKF 238 (389)
T ss_dssp HHHHHHHHTTSCTTBCTTCCHHHHHHHHGGG
T ss_pred HHHHHHHHHhcCCchhhcccHHHHHHHHHHh
Confidence 33344446778888 99999999888765
No 452
>2ky4_A Phycobilisome linker polypeptide; NESG, PSI, structural genomics, protein structure initiative northeast structural genomics consortium; NMR {Nostoc SP}
Probab=24.56 E-value=75 Score=22.11 Aligned_cols=23 Identities=26% Similarity=0.586 Sum_probs=18.4
Q ss_pred CCcccHHHHHHHHhcChHHHHHh
Q psy8447 187 DGKISFQDFQQSVTDEPLLLEAF 209 (229)
Q Consensus 187 dg~Is~~ef~~~~~~~~~~~~~~ 209 (229)
+|.||..||++.+...+.+.+-|
T Consensus 50 nG~IsVReFVR~LakS~~Yr~~f 72 (149)
T 2ky4_A 50 NGEITVKEFIEGLGYSNLYLKEF 72 (149)
T ss_dssp HTSSCHHHHHHHHHHCHHHHHHH
T ss_pred cCCccHHHHHHHHHcCHHHHHHh
Confidence 68899999999998887655443
No 453
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=24.04 E-value=66 Score=21.24 Aligned_cols=63 Identities=16% Similarity=0.198 Sum_probs=38.2
Q ss_pred HhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHH
Q psy8447 136 IYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLL 206 (229)
Q Consensus 136 ~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~ 206 (229)
..|...+ .++.+++..++..++.....+.++. -...++..+.. +..++-++..++|..+|.++
T Consensus 34 ~~di~~~-~~~~~eL~~~l~~~g~~~~~~l~n~------~~~~~k~l~l~-~~~ls~~~~~~lm~~~p~Li 96 (121)
T 3rdw_A 34 VVLYLET-PPSVDKLKELLQQLGFSDARQLMRT------KEDLYKTLNLD-DRGLTQDQLLQAMADNPKLI 96 (121)
T ss_dssp EECTTTS-CCCHHHHHHHHHHTTCSSGGGGBCT------TSHHHHHTTTT-CTTCCHHHHHHHHHHCGGGB
T ss_pred EEeeccC-CCcHHHHHHHHHhcCCcCHHHHhcC------CChhhhhcCcc-cccCCHHHHHHHHHhCccce
Confidence 3444443 4688888888887653111111111 12255665544 34589999999999999873
No 454
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=22.68 E-value=3.2e+02 Score=22.34 Aligned_cols=94 Identities=7% Similarity=-0.021 Sum_probs=62.9
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHhhccCChHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHhhcCCCCCCChHHHHH
Q psy8447 94 MERIFCAFDRLCDGVIHLDEWVLGLSCFLRGTNEELIKFTFLIYDLNNDGFITREEMFQLLRNSLISHPQDEDPDEGVRD 173 (229)
Q Consensus 94 ~~~lf~~~d~~~~g~I~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~~~~G~I~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 173 (229)
+...|+..-.++. .|.|.+|...+.....-........+=..+|.-.+++|+..||-.+++-++... .
T Consensus 140 A~~fW~~~fg~~~-~v~W~~f~~~~~~~~~~~~~~~~~~lk~~~~~t~~~~vs~~~f~~f~~~f~p~~--------~--- 207 (389)
T 2y1n_A 140 AAEFWRKAFGEKT-IVPWKSFRQALHEVHPISSGLEAMALKSTIDLTCNDYISVFEFDIFTRLFQPWS--------S--- 207 (389)
T ss_dssp HHHHHHHHHTTCS-EEEHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTCCGG--------G---
T ss_pred HHHHHHHhCCCCe-eeeHHHHHHHHHHhcCCCCCchhhhHhhccCcccCCccchhhhchHHHHhccHH--------H---
Confidence 5555655444443 599999999999977654444344455567888999999999999997653211 1
Q ss_pred HHHHHHHHcCCCCCC---cccHHHHHHHHh
Q psy8447 174 LVELALRKMDYDKDG---KISFQDFQQSVT 200 (229)
Q Consensus 174 ~~~~~~~~~d~~~dg---~Is~~ef~~~~~ 200 (229)
+-..+.....+..| .++|++..+.+.
T Consensus 208 -l~~~~~~~~~~hpg~~af~ty~ev~~~Lk 236 (389)
T 2y1n_A 208 -LLRNWNSLAVTHPGYMAFLTYDEVKARLQ 236 (389)
T ss_dssp -HHHHHHHHTTSCTTBCTTCCHHHHHHHHG
T ss_pred -HHHHHHHHHhcCCchhhcccHHHHHHHHH
Confidence 22233334566677 889988776655
No 455
>3pru_C Phycobilisome 32.1 kDa linker polypeptide, phycoc associated, ROD 1; structural genomics, PSI-biology; 2.68A {Synechocystis SP} PDB: 2l8v_A
Probab=22.18 E-value=91 Score=21.83 Aligned_cols=23 Identities=30% Similarity=0.606 Sum_probs=18.4
Q ss_pred CCcccHHHHHHHHhcChHHHHHh
Q psy8447 187 DGKISFQDFQQSVTDEPLLLEAF 209 (229)
Q Consensus 187 dg~Is~~ef~~~~~~~~~~~~~~ 209 (229)
+|.||..||++.+.+.+.+.+.|
T Consensus 52 nG~ItVReFVR~LakSe~Yr~~f 74 (154)
T 3pru_C 52 NGSISVREFVRTVAKSELYKKKF 74 (154)
T ss_dssp HTSSCHHHHHHHHHTSHHHHHHH
T ss_pred cCCcCHHHHHHHHHcCHHHHHHh
Confidence 58899999999998887755543
No 456
>3l1p_A POU domain, class 5, transcription factor 1; POU, transcription factor DNA complex, pore, stem cells; HET: DNA; 2.80A {Mus musculus} PDB: 1ocp_A
Probab=21.96 E-value=49 Score=23.05 Aligned_cols=15 Identities=7% Similarity=-0.203 Sum_probs=7.3
Q ss_pred CCChhHHHHHHhccC
Q psy8447 51 GLPPSNVTERYKGFS 65 (229)
Q Consensus 51 ~l~~~~~~~l~~~f~ 65 (229)
.++..++..+...|.
T Consensus 102 ~ft~~Q~~~Le~~F~ 116 (155)
T 3l1p_A 102 SIENRVRWSLETMFL 116 (155)
T ss_dssp CCCHHHHHHHHTTTT
T ss_pred ccCHHHHHHHHHHHc
Confidence 344455555555554
No 457
>4gif_A Polycystic kidney disease 2-like 1 protein; coiled-coil, trimer, Trp channel, transient receptor potenti channel, polycystic kidney disease (PKD); 2.80A {Homo sapiens}
Probab=21.95 E-value=1.1e+02 Score=16.57 Aligned_cols=16 Identities=38% Similarity=0.779 Sum_probs=13.0
Q ss_pred CcccHHHHHHHHHHHh
Q psy8447 143 GFITREEMFQLLRNSL 158 (229)
Q Consensus 143 G~I~~~e~~~~l~~~~ 158 (229)
+.++.+||..+.+.+.
T Consensus 2 ~~Vs~eeF~~L~rRVl 17 (45)
T 4gif_A 2 GWVSGEEFYMLTRRVL 17 (45)
T ss_dssp CCCCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHH
Confidence 5688999999888764
No 458
>3osj_A Phycobilisome LCM core-membrane linker polypeptid; structural genomics, PSI-biology; 2.30A {Synechocystis SP} PDB: 2l06_A
Probab=21.83 E-value=89 Score=21.68 Aligned_cols=23 Identities=30% Similarity=0.704 Sum_probs=18.0
Q ss_pred CCcccHHHHHHHHhcChHHHHHh
Q psy8447 187 DGKISFQDFQQSVTDEPLLLEAF 209 (229)
Q Consensus 187 dg~Is~~ef~~~~~~~~~~~~~~ 209 (229)
+|.||..||++.+.+.+.+.+.|
T Consensus 58 nG~ItVReFIR~LakS~~Yr~~f 80 (147)
T 3osj_A 58 NGDISMKEFVRRLAKSPLYRKQF 80 (147)
T ss_dssp HTSSCHHHHHHHHHHSHHHHHHH
T ss_pred cCCccHHHHHHHHHcCHHHHHHh
Confidence 58899999999998877655433
No 459
>3v9r_A MHF1, uncharacterized protein YOL086W-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=21.72 E-value=1.6e+02 Score=18.50 Aligned_cols=28 Identities=21% Similarity=0.223 Sum_probs=23.8
Q ss_pred CCCCCcccHHHHHHHHhcChHHHHHhcc
Q psy8447 184 YDKDGKISFQDFQQSVTDEPLLLEAFGQ 211 (229)
Q Consensus 184 ~~~dg~Is~~ef~~~~~~~~~~~~~~~~ 211 (229)
.-+...|+-+|..-+++++|.+.+.++.
T Consensus 62 HAgRkTI~~eDV~L~~Rrn~~L~~~l~~ 89 (90)
T 3v9r_A 62 HAGRGVVNKSDLMLYLRKQPDLQERVTQ 89 (90)
T ss_dssp HTTCSEECHHHHHHHTTTCHHHHHHHCC
T ss_pred HcCCCccCHHHHHHHHHhChHHHHHhhc
Confidence 4567789999999999999999887653
No 460
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=20.43 E-value=1.3e+02 Score=18.81 Aligned_cols=22 Identities=23% Similarity=0.434 Sum_probs=15.6
Q ss_pred ChHHHHHHHHHHhcCCCCCccc
Q psy8447 125 TNEELIKFTFLIYDLNNDGFIT 146 (229)
Q Consensus 125 ~~~~~~~~~F~~~D~~~~G~I~ 146 (229)
+++.++..|++.+..+++..++
T Consensus 62 sSd~EL~eAl~l~~~n~~~~l~ 83 (89)
T 1vd2_A 62 SSQLELEEAFRLYELNKDSELL 83 (89)
T ss_dssp CSHHHHHHHHHHHHHTSCCCEE
T ss_pred cCHHHHHHHHHHHHccCCCCEE
Confidence 4567778888888777776553
No 461
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=20.43 E-value=1.9e+02 Score=18.87 Aligned_cols=55 Identities=13% Similarity=0.169 Sum_probs=33.7
Q ss_pred ccHHHHHHHHHHHhhcCCCCCCChHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHhcChHHH
Q psy8447 145 ITREEMFQLLRNSLISHPQDEDPDEGVRDLVELALRKMDYDKDGKISFQDFQQSVTDEPLLL 206 (229)
Q Consensus 145 I~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~dg~Is~~ef~~~~~~~~~~~ 206 (229)
++.+|+..++..++.......++. -...++..+... -.++-++..++|..+|.++
T Consensus 41 ~t~~eL~~~l~~~g~~~~~~l~n~------~~~~~k~l~l~~-~~ls~~~~~~lm~~~p~Li 95 (119)
T 3f0i_A 41 PSVEELKRLYQQLGLNEVRAMMRC------KEELYKELNLGD-SQLSDDALFAAMAEHPKLI 95 (119)
T ss_dssp CCHHHHHHHHHHHTCSSGGGGBCT------TSHHHHHTTTTC-TTCCHHHHHHHHHHCGGGB
T ss_pred CcHHHHHHHHHHcCCccHHHHhcC------CCchhhhcCccc-ccCCHHHHHHHHHhChhhe
Confidence 577888888877653201111111 122556655433 3589999999999999873
No 462
>2oy9_A UPF0223 protein BH2638; PFAM, structural genomics, PSI-2, protein structure initiative; 1.60A {Bacillus halodurans c-125} SCOP: a.276.1.1
Probab=20.41 E-value=1.8e+02 Score=18.59 Aligned_cols=40 Identities=13% Similarity=0.177 Sum_probs=18.6
Q ss_pred CCHHHHHHHHhhhcCCCcHHHHHHHHHHHHccCCCCceeHH
Q psy8447 72 LDRVVFRELLHNTFDLVTEEILMERIFCAFDRLCDGVIHLD 112 (229)
Q Consensus 72 i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~I~~~ 112 (229)
|+..+|...++.+....+....-.++++.|.. .+|.-.|.
T Consensus 36 V~r~~ll~~Y~~FK~VVPsKsEEKql~reFE~-~SGYS~Y~ 75 (98)
T 2oy9_A 36 IAREDLLGKYRRFKEIVPSKSEEKQLFRAYEQ-ENDVSCYQ 75 (98)
T ss_dssp EEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHT-TSSCCHHH
T ss_pred CcHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-HhCCcHHH
Confidence 55666666655553322222223455555543 23444444
Done!