RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8448
(482 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 120 bits (301), Expect = 3e-31
Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 13/178 (7%)
Query: 97 FGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLK------------YQAQD 144
G + V R + DG + + S D + VW T + + +L+ ++
Sbjct: 140 TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSY 199
Query: 145 NFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRD 204
+ + + + L SGS+ +K+W ++TG CL L H V + F
Sbjct: 200 SSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHSG 258
Query: 205 NSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMW 262
IL+ + D +R+ K+ + +K H FV + F V++ S D TVK+W
Sbjct: 259 GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
Score = 112 bits (279), Expect = 3e-28
Identities = 57/319 (17%), Positives = 114/319 (35%), Gaps = 63/319 (19%)
Query: 88 PTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLK-------- 139
P K G +S V F P +++ S D I+VW++ TG + LK
Sbjct: 5 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64
Query: 140 --------------------------YQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGK 173
++ + V S++ + + + S S+
Sbjct: 65 ISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 124
Query: 174 VKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRG 233
+K+W++ TG C++ H V ++ ++D + I + S D VR+ + + + E R
Sbjct: 125 IKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 183
Query: 234 HSSFVNDITFTAD--------------------GHSVLSASSDGTVKMWNLKTTECTSTF 273
H V I++ + G +LS S D T+KMW++ T C T
Sbjct: 184 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 243
Query: 274 KSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQ-GQIVRSLSSGKREGGDFLCCT 332
D V + + + C T+ + + + + +++L++ +
Sbjct: 244 V---GHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRCMKTLNAHE---HFVTSLD 296
Query: 333 TSPRGEWIYCVGEDMVLVV 351
++ D + V
Sbjct: 297 FHKTAPYVVTGSVDQTVKV 315
Score = 72.9 bits (177), Expect = 8e-15
Identities = 58/349 (16%), Positives = 100/349 (28%), Gaps = 76/349 (21%)
Query: 175 KIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGH 234
K W I L H VT + F S +++AS D +++ ++G + +GH
Sbjct: 1 KEW-IPRPPEKYAL-SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGH 58
Query: 235 SSFVNDITFTA------------------------------------------DGHSVLS 252
+ V DI+F +G ++S
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118
Query: 253 ASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQG 312
AS D T+KMW ++T C TF ++ C+ TV + +
Sbjct: 119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRM----VRPNQDGTLIASCSNDQTVRVWVVAT 174
Query: 313 QIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQE 372
+ ++ R + + I +L + KT++
Sbjct: 175 KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 234
Query: 373 ETGVSLNTVDSVDGFIADINNGHWDTVLKSVQSLKLPEKKLIDLYEQVVLELIELRELGA 432
TG+ L T+ D ++ + + S A
Sbjct: 235 STGMCLMTLVGHDNWVRGVLFHSGGKFILS----------------------------CA 266
Query: 433 ARSLLRQTDPMIFMKQHEPEVHEKLVIGLTHHPHQNLLGTYSEDGLLRF 481
LR D HE V L H + T S D ++
Sbjct: 267 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 315
Score = 70.2 bits (170), Expect = 7e-14
Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLA 157
G + V F G+++++ + D + VW++ + K L E V SL
Sbjct: 245 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH--------EHFVTSLD 296
Query: 158 YSRDSEMLASGSQSGKVKIWK 178
+ + + + +GS VK+W+
Sbjct: 297 FHKTAPYVVTGSVDQTVKVWE 317
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 107 bits (268), Expect = 3e-26
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 18/182 (9%)
Query: 101 SHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSR 160
A DG+Y+ GS+D + VW+ TG + + L + + + +++V S+ ++R
Sbjct: 206 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE-SGTGHKDSVYSVVFTR 264
Query: 161 DSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSL-----------GVTCIQFSRDNSQIL 209
D + + SGS VK+W + + +S V + ++++ IL
Sbjct: 265 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL 324
Query: 210 TASFDTYVRIHGLKSGKMLKEFRGHSS------FVNDITFTADGHSVLSASSDGTVKMWN 263
+ S D V KSG L +GH + N + + + + S D ++W
Sbjct: 325 SGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Query: 264 LK 265
K
Sbjct: 385 YK 386
Score = 91.8 bits (226), Expect = 8e-21
Identities = 52/285 (18%), Positives = 90/285 (31%), Gaps = 54/285 (18%)
Query: 81 DQEEEKYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVD------------------- 121
D K P L+ S ++ FSPDG++L TG+ D
Sbjct: 102 DSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG 161
Query: 122 ---------------GFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEMLA 166
+ T +I Q + + D + +A
Sbjct: 162 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA 221
Query: 167 SGSQSGKVKIWKIATGQCLRKLE------KAHSLGVTCIQFSRDNSQILTASFDTYVRIH 220
+GS V++W TG + +L+ H V + F+RD +++ S D V++
Sbjct: 222 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281
Query: 221 GLKSGK------------MLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTE 268
L++ + GH FV + T + +LS S D V W+ K+
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 269 CTSTFK--SLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQ 311
+ +AV + L F + I +
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 84.5 bits (207), Expect = 2e-18
Identities = 52/282 (18%), Positives = 104/282 (36%), Gaps = 27/282 (9%)
Query: 94 QIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLM---- 149
S V C +FS DG+YL TG + +V+ + G + L + N
Sbjct: 56 HKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNT 114
Query: 150 ------EEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSR 203
+ + S+ +S D + LA+G++ ++IW I + + + H + + +
Sbjct: 115 SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMI-LQGHEQDIYSLDYFP 173
Query: 204 DNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWN 263
++++ S D VRI L++G+ DG + + S D V++W+
Sbjct: 174 SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWD 233
Query: 264 LKTTECTSTFKS----LGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRS-- 317
+T S +V S+ + + V + +V + N+Q +S
Sbjct: 234 SETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDS 292
Query: 318 --------LSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVV 351
+ L T+ E+I +D ++
Sbjct: 293 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF 334
Score = 44.4 bits (103), Expect = 2e-05
Identities = 39/281 (13%), Positives = 79/281 (28%), Gaps = 28/281 (9%)
Query: 228 LKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFK------------- 274
L + H+S V + F+ DG L+ + T +++ + +
Sbjct: 55 LHKSLDHTSVVCCVKFSNDG-EYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLN 113
Query: 275 --SLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCT 332
S +SD+ + S+ P + +IV L +++
Sbjct: 114 TSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP 173
Query: 333 TSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQEETGVSLNTVDSVDGFI--AD 390
+ + + +R Q L S S+D + D
Sbjct: 174 SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWD 233
Query: 391 INNGHWDTVLKSVQSLKLPEKKLI-----DLYEQVVL-----ELIELRELGAARSLLRQT 440
G L S K + Q V+ ++L L A +
Sbjct: 234 SETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 293
Query: 441 DPMIFMKQHEPEVHEKLVIGLTHHPHQNLLGTYSEDGLLRF 481
P + H+ V+ + + + + S+D + F
Sbjct: 294 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLF 334
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 107 bits (266), Expect = 3e-26
Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 9/163 (5%)
Query: 102 HVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD 161
V +PD + ++G+ D ++W+ G R+ E + ++ + +
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH--------ESDINAICFFPN 237
Query: 162 SEMLASGSQSGKVKIWKIATGQCLRKLEKAHSL-GVTCIQFSRDNSQILTASFDTYVRIH 220
A+GS +++ + Q L + + G+T + FS+ +L D +
Sbjct: 238 GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 221 GLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWN 263
GH + V+ + T DG +V + S D +K+WN
Sbjct: 298 DALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 88.3 bits (217), Expect = 9e-20
Identities = 41/299 (13%), Positives = 92/299 (30%), Gaps = 58/299 (19%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLA 157
G + + + D + L++ S DG + +W+ T L VM+ A
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH--------AIPLRSSWVMTCA 104
Query: 158 YSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKA-------------------------- 191
Y+ +A G I+ + T + ++ +
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 192 ------------------HSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRG 233
H+ V + + D ++ + D ++ ++ G + F G
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 234 HSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNT 293
H S +N I F +G++ + S D T ++++L+ + T+ + S+ +
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC-GITSVSFSK-SG 282
Query: 294 EHFVVCNKTNTVVIMNMQ-GQIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVV 351
+ + + L+ C + G + D L +
Sbjct: 283 RLLLAGYDDFNCNVWDALKADRAGVLAGHD---NRVSCLGVTDDGMAVATGSWDSFLKI 338
Score = 67.8 bits (164), Expect = 5e-13
Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 8/77 (10%)
Query: 101 SHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSR 160
+ FS G+ L+ G D VW+ L + V L +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH--------DNRVSCLGVTD 322
Query: 161 DSEMLASGSQSGKVKIW 177
D +A+GS +KIW
Sbjct: 323 DGMAVATGSWDSFLKIW 339
Score = 54.0 bits (128), Expect = 2e-08
Identities = 23/122 (18%), Positives = 51/122 (41%), Gaps = 7/122 (5%)
Query: 149 MEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQI 208
+ +A + A + S++ + G++++ + R L + H + + + D+ +
Sbjct: 18 IRDARKACADATLSQITNNIDPVGRIQM------RTRRTL-RGHLAKIYAMHWGTDSRLL 70
Query: 209 LTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTE 268
++AS D + I + + SS+V + G+ V D ++NLKT E
Sbjct: 71 VSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130
Query: 269 CT 270
Sbjct: 131 GN 132
Score = 52.8 bits (125), Expect = 3e-08
Identities = 41/333 (12%), Positives = 86/333 (25%), Gaps = 50/333 (15%)
Query: 150 EEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQIL 209
+ ++ + DS +L S SQ GK+ IW T + + S V ++ + +
Sbjct: 55 LAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP-LRSSWVMTCAYAPSGNYVA 113
Query: 210 TASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTEC 269
D I+ LK+ + + + L E
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173
Query: 270 TSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQ-GQIVRSLSSGKREGGDF 328
+ V S+ L +T FV + + +++ G ++ + + D
Sbjct: 174 GQQTTTFTGHTGDVMSLSL-APDTRLFVSGACDASAKLWDVREGMCRQTFTGHE---SDI 229
Query: 329 LCCTTSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQEETGVSLNTVDSVDGFI 388
P G +D + ++ + T G++ + +
Sbjct: 230 NAICFFPNGNAFATGSDDATCRLFDLRAD----QELMTYSHDNIICGITSVSFSKSGRLL 285
Query: 389 ADINNGHWDTVLKSVQSLKLPEKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIFMKQ 448
G+ D + + +
Sbjct: 286 L---AGYDD---FNCNVWDALKADRAGVLAG----------------------------- 310
Query: 449 HEPEVHEKLVIGLTHHPHQNLLGTYSEDGLLRF 481
H+ V L + T S D L+
Sbjct: 311 -----HDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Score = 46.7 bits (109), Expect = 3e-06
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 226 KMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFK 274
+ + RGH + + + + D ++SAS DG + +W+ TT
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP 94
Score = 44.7 bits (104), Expect = 1e-05
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWN 128
G + V C + DG + TGS D F+++WN
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 82.2 bits (201), Expect = 1e-17
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 19/169 (11%)
Query: 105 CARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEM 164
DG ++++GS+D I VW+ TG L ++ +
Sbjct: 180 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----------LTSGMELKDNI 229
Query: 165 LASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKS 224
L SG+ VKIW I TGQCL+ L+ + + + ++T+S D V++ LK+
Sbjct: 230 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 289
Query: 225 GKMLKEFR-----GHSSFVNDITFTADGHSVLSASSDGT----VKMWNL 264
G+ ++ G V I + S +GT + + +
Sbjct: 290 GEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
Score = 77.2 bits (188), Expect = 4e-16
Identities = 51/284 (17%), Positives = 100/284 (35%), Gaps = 43/284 (15%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLK------------------ 139
G HV G +++GS D ++VW+ TGK + L
Sbjct: 14 GHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIIS 72
Query: 140 ------------YQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRK 187
+ L + + SGS+ +++W I TGQCL
Sbjct: 73 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHV 132
Query: 188 LEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADG 247
L + D ++++ ++D V++ ++ L +GH++ V + F DG
Sbjct: 133 LMGHVA---AVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DG 187
Query: 248 HSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVI 307
V+S S D ++++W+++T C T + + L V N +TV I
Sbjct: 188 IHVVSGSLDTSIRVWDVETGNCIHTLTG---HQSLTSGMELKDN---ILVSGNADSTVKI 241
Query: 308 MNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVV 351
+++ G + ++ +D + +
Sbjct: 242 WDIKTGQCLQTLQGPNKHQSA-VTCLQFNKNFVITSSDDGTVKL 284
Score = 65.2 bits (157), Expect = 3e-12
Identities = 47/233 (20%), Positives = 97/233 (41%), Gaps = 17/233 (7%)
Query: 78 AMKDQEEEKYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKD 137
+D + + + + DG+ +++G+ D ++VW+ T
Sbjct: 113 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 172
Query: 138 LKYQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVT 197
L+ + D + SGS +++W + TG C+ L SL +
Sbjct: 173 LQGHTNRVYS----------LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL-TS 221
Query: 198 CIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTA-DGHSVLSASSD 256
++ ++ +++ + D+ V+I +K+G+ L+ +G + + +T + + V+++S D
Sbjct: 222 GMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD 279
Query: 257 GTVKMWNLKTTECTSTFKSL--GASDIAVNSIHLLPKNTEHFVVCNKTNTVVI 307
GTVK+W+LKT E +L G S V I V ++ T
Sbjct: 280 GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEET 331
Score = 57.5 bits (137), Expect = 1e-09
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 177 WKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSS 236
W+ + + L K H V ++I++ S D +++ +GK L+ GH+
Sbjct: 1 WRRGELKSPKVL-KGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 237 FVNDITFTADGH 248
V +
Sbjct: 59 GVWSSQMRDNII 70
Score = 38.6 bits (88), Expect = 0.001
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 81 DQEEEKYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDG----FIEVWNF 129
D + ++ L GS V R S GS +G + V +F
Sbjct: 286 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 81.8 bits (200), Expect = 1e-17
Identities = 22/185 (11%), Positives = 49/185 (26%), Gaps = 11/185 (5%)
Query: 94 QIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAV 153
SH F D + L S + ++ + L+ +
Sbjct: 172 FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPF-VIPLIPGSP 230
Query: 154 MSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKA------HSLGVTCIQFSRDNSQ 207
S +G + + + L + +
Sbjct: 231 NPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAY 290
Query: 208 ILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTT 267
A + + +K+ K+ + + D+ +AD +V+ DG + + L+
Sbjct: 291 YQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 346
Query: 268 ECTST 272
E T
Sbjct: 347 EDERT 351
Score = 63.3 bits (152), Expect = 2e-11
Identities = 12/92 (13%), Positives = 27/92 (29%), Gaps = 12/92 (13%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLA 157
S Y G + ++ T K+ + ++ + L
Sbjct: 274 SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE------------VKNNLTDLR 321
Query: 158 YSRDSEMLASGSQSGKVKIWKIATGQCLRKLE 189
S D + + GK+ + + + R +E
Sbjct: 322 LSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
Score = 63.3 bits (152), Expect = 2e-11
Identities = 25/275 (9%), Positives = 68/275 (24%), Gaps = 11/275 (4%)
Query: 87 YPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDG--FIEVWNFTTGKIRKDLKYQAQD 144
+ +K + R D + F+ ++++ TGK K +
Sbjct: 29 QDVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNV 88
Query: 145 NFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRD 204
M ++ + D + + + + +
Sbjct: 89 FAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 148
Query: 205 NSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNL 264
+ ++ ++ K+ +S F AD ++ S +
Sbjct: 149 KHGETDGYVMQAIHVYDMEGRKI-FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 207
Query: 265 KTTEC----TSTFKSLGASDIAVNSIHLLPKNTE----HFVVCNKTNTVVIMNMQGQIVR 316
S + + N L+P++ + + + +N+ R
Sbjct: 208 VVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYR 267
Query: 317 SLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVV 351
+ + + + E VL+
Sbjct: 268 MIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK 302
Score = 47.9 bits (112), Expect = 2e-06
Identities = 22/161 (13%), Positives = 51/161 (31%), Gaps = 16/161 (9%)
Query: 106 ARFSP-DGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEM 164
FSP DG + S G + + + + K + + + D+++
Sbjct: 8 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK----------VPEPLRIRYVRRGGDTKV 56
Query: 165 LASGSQSGK--VKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGL 222
+ I+ TG+ + E + V + R+ + A+ + L
Sbjct: 57 AFIHGTREGDFLGIYDYRTGKAEKFEE--NLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 114
Query: 223 KSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWN 263
++GK R + + D T + + + +
Sbjct: 115 ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 155
Score = 26.7 bits (57), Expect = 6.6
Identities = 7/99 (7%), Positives = 20/99 (20%), Gaps = 7/99 (7%)
Query: 245 ADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKT-N 303
DG + S G + ++ T + + + F+ + +
Sbjct: 13 LDGDLIAFVS-RGQAFIQDVSGTYVLKV-----PEPLRIRYVRRGGDTKVAFIHGTREGD 66
Query: 304 TVVIMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIYC 342
+ I + +
Sbjct: 67 FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND 105
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 77.1 bits (188), Expect = 4e-16
Identities = 29/212 (13%), Positives = 60/212 (28%), Gaps = 23/212 (10%)
Query: 97 FGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSL 156
F V R + DG + G I + TGK L + + V+
Sbjct: 141 FPMPRQVYLMRAADDGSLYVAGP---DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF 197
Query: 157 AYSR-----------------DSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCI 199
+ D + A+ + TG+ + +
Sbjct: 198 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTG 257
Query: 200 QFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTV 259
S + + + + + LK K++K + F G + + +
Sbjct: 258 LRSPKDPNQIYGVLNR-LAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLGGTFNDL 315
Query: 260 KMWNLKTTECTSTFKSLGASDIAVNSIHLLPK 291
++N T E K L D++ + + +
Sbjct: 316 AVFNPDTLEKVKNIK-LPGGDMSTTTPQVFIR 346
Score = 65.9 bits (159), Expect = 2e-12
Identities = 28/341 (8%), Positives = 80/341 (23%), Gaps = 51/341 (14%)
Query: 108 FSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD-SEMLA 166
+Y+I + + V + + + K + + + D
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFG-------PGTAMMAPDNRTAYV 56
Query: 167 SGSQSGKVKIWKIATGQCLRKLEKA-----HSLGVTCIQFSRDNSQILTASFDT------ 215
+ G + + T + + + S D ++ T
Sbjct: 57 LNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 116
Query: 216 ------YVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTEC 269
+ + G K R + + + ++KT +
Sbjct: 117 YVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGSLYVAGPDIYKMDVKTGKY 175
Query: 270 TSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFL 329
T + P + + + ++ + +
Sbjct: 176 TVALP----LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 231
Query: 330 C-----CTTSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQEETGVSLNTVD-- 382
T + + E +R + + ++ L + + +
Sbjct: 232 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLD 291
Query: 383 --------SVDG---FIADINNGH--WDTV-LKSVQSLKLP 409
G ++ N ++ L+ V+++KLP
Sbjct: 292 HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332
Score = 65.9 bits (159), Expect = 2e-12
Identities = 15/206 (7%), Positives = 45/206 (21%), Gaps = 19/206 (9%)
Query: 156 LAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQIL-TASFD 214
A E + + + + +A+ + G + DN +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 215 TYVRIHGLKSGKMLKEFR------GHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTE 268
+ L + K + + DG V + + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 269 C--------TSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSS 320
+ ++L+ + + + + G+ +L
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPL 181
Query: 321 GKREGGDFLCCTTSPRGEWIYCVGED 346
++P + +
Sbjct: 182 RNWNRK----GYSAPDVLYFWPHQSP 203
Score = 64.8 bits (156), Expect = 5e-12
Identities = 33/302 (10%), Positives = 81/302 (26%), Gaps = 53/302 (17%)
Query: 90 QLSKQIKFGSKSHVECARFSPDGQYL-ITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFML 148
+ K K A +PD + + + G I + T K
Sbjct: 29 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL--SSVPGE 86
Query: 149 MEEAVMSLAYSRDSEMLASGSQS------------GKVKIWKIATGQCLRKLEKAHSL-G 195
+ ++ S A S D + + + +++++ A G + +
Sbjct: 87 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ 146
Query: 196 VTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSS------------------- 236
V ++ + D S + + + +GK +
Sbjct: 147 VYLMRAADDGSLYVAGPDIYKMDVK---TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSP 203
Query: 237 ------FVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLP 290
F D +A +LKT + + +
Sbjct: 204 RHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS--- 260
Query: 291 KNTEHFVVCNKTNTVVIMNMQ-GQIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVL 349
+ + N + +++ +++++ + + C +G+ +Y G L
Sbjct: 261 -PKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHT----YYCVAFDKKGDKLYLGGTFNDL 315
Query: 350 VV 351
V
Sbjct: 316 AV 317
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 77.2 bits (188), Expect = 5e-16
Identities = 24/322 (7%), Positives = 82/322 (25%), Gaps = 25/322 (7%)
Query: 103 VECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDS 162
+ C ++ D + + + ++ + K + + + + V + ++ DS
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG------QVTGVDWAPDS 63
Query: 163 EMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDT-----YV 217
+ + +W + L N + +
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Query: 218 RIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTE--------- 268
+ S V + + + + + S D ++++ E
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP 183
Query: 269 ---CTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREG 325
+ + S + +H + + V ++ + ++++ E
Sbjct: 184 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
Query: 326 GDFLCCTTSPRGEWIYCVGEDMVLV--VRLIQQYLKESNLMKTLQCLQEETGVSLNTVDS 383
L T + + ++ L + + + + +
Sbjct: 244 LPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 303
Query: 384 VDGFIADINNGHWDTVLKSVQS 405
+D + + L S+
Sbjct: 304 LDKKASSEGSAAAGAGLDSLHK 325
Score = 74.9 bits (182), Expect = 3e-15
Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 5/212 (2%)
Query: 192 HSLG---VTCIQFSRDNSQILTASFDTYVRIHGLKSGKM--LKEFRGHSSFVNDITFTAD 246
HS ++C +++D +QI + V I+ K + E + H+ V + + D
Sbjct: 3 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD 62
Query: 247 GHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVV 306
+ +++ +D +W LK T L + A + ++ ++
Sbjct: 63 SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 122
Query: 307 IMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKT 366
+ K L P + D + E T
Sbjct: 123 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT 182
Query: 367 LQCLQEETGVSLNTVDSVDGFIADINNGHWDT 398
+ G + S G++ + +
Sbjct: 183 PWGSKMPFGELMFESSSSCGWVHGVCFSANGS 214
Score = 72.2 bits (175), Expect = 2e-14
Identities = 26/203 (12%), Positives = 68/203 (33%), Gaps = 7/203 (3%)
Query: 148 LMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLE-KAHSLGVTCIQFSRDNS 206
+ E + A+++D +A + +V I++ + + ++ E K H+ VT + ++ D++
Sbjct: 5 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN 64
Query: 207 QILTASFDTYVRI--HGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNL 264
+I+T D + ++ K + + + + S + +
Sbjct: 65 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124
Query: 265 KTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVR----SLSS 320
+ K + + N+ + I + + V
Sbjct: 125 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 184
Query: 321 GKREGGDFLCCTTSPRGEWIYCV 343
G + L +S W++ V
Sbjct: 185 GSKMPFGELMFESSSSCGWVHGV 207
Score = 62.6 bits (150), Expect = 3e-11
Identities = 25/183 (13%), Positives = 58/183 (31%), Gaps = 17/183 (9%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLA 157
S V FS +G + S D + + + K A ++++
Sbjct: 199 SSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD--------KKMAVATLASETLPLLAVT 250
Query: 158 YSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYV 217
+ +S ++A+G ++ + ++ + D
Sbjct: 251 FITESSLVAAGH-DCFPVLFTYDSAAGKLSF-GGRLDVPKQSSQRGLTARERFQNLDKKA 308
Query: 218 RIHGLKSGKMLKEFRGHSSFVNDITFTADGHS----VLSASSDGTVKMWNLKTTECTSTF 273
G + H + V+ I+ + G + + DG + +W++++ E S
Sbjct: 309 SSEG-SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE--SAL 365
Query: 274 KSL 276
K L
Sbjct: 366 KDL 368
Score = 49.9 bits (117), Expect = 3e-07
Identities = 30/235 (12%), Positives = 67/235 (28%), Gaps = 58/235 (24%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIR---------------------- 135
V ++PD ++T D VW +
Sbjct: 49 EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK 108
Query: 136 ------------------KDLKYQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIW 177
++ + + + V+SL + +S +LA+GS K +I+
Sbjct: 109 KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF 168
Query: 178 KIATGQCLRKLEKAHSL-----------------GVTCIQFSRDNSQILTASFDTYVRIH 220
+ + V + FS + S++ S D+ V +
Sbjct: 169 SAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLA 228
Query: 221 GLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKS 275
+ + + +TF + S+++A D ++ + +F
Sbjct: 229 DADKKMAVATLASETLPLLAVTFITES-SLVAAGHDCFPVLFTYDSAAGKLSFGG 282
Score = 37.1 bits (84), Expect = 0.003
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Query: 88 PTQLSKQIKFGSKSHVECARFSPDGQY----LITGSVDGFIEVWNFTTGKIR-KDLK 139
+ K+ V G+ T +DG + +W+ + + KDLK
Sbjct: 313 SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLK 369
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 74.8 bits (182), Expect = 2e-15
Identities = 20/198 (10%), Positives = 54/198 (27%), Gaps = 16/198 (8%)
Query: 101 SHVECARFSPDGQYLITGSVDGFIEVWN-------------FTTGKIRKDLKYQAQDNFM 147
+ ++ DG L D + + D+ +
Sbjct: 135 RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES 194
Query: 148 LMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQ 207
A +D + + + + TG+ + + V + + ++
Sbjct: 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM--DVFYFSTAVNPAK 252
Query: 208 ILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTT 267
+ L+ +K + + DG +V + G + ++ +T
Sbjct: 253 TRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311
Query: 268 ECTSTFKSLGASDIAVNS 285
E G + +++ S
Sbjct: 312 EKKGQVDLPGNASMSLAS 329
Score = 59.0 bits (141), Expect = 4e-10
Identities = 31/325 (9%), Positives = 83/325 (25%), Gaps = 34/325 (10%)
Query: 113 QYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD-SEMLASGSQS 171
Y++ + + V + + K + M + A+ ++S
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGP------TPMVPMVAPGGRIAYATVNKS 55
Query: 172 GKVKIWKIATGQCLRKLE----KAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKM 227
+ + TG+ L +++ + + S D + + + +
Sbjct: 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115
Query: 228 -----------LKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWN----LKTTECTST 272
++ + + + DG + D V ++ S
Sbjct: 116 RVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSW 175
Query: 273 FKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCT 332
A + + + + L + E G+
Sbjct: 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235
Query: 333 TSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQE-ETGVSLNTVD-SVDG---F 387
+ + + + ES ++ ++ S +V+ S DG +
Sbjct: 236 VRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVW 295
Query: 388 IADINN--GHWDTV-LKSVQSLKLP 409
+ +D L+ + LP
Sbjct: 296 LGGALGDLAAYDAETLEKKGQVDLP 320
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 73.0 bits (177), Expect = 6e-15
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 24/168 (14%)
Query: 105 CARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEM 164
D +Y+++ S D I+VWN +T + + L + +
Sbjct: 141 VNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC----------LQYRDRL 190
Query: 165 LASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKS 224
+ SGS +++W I G CLR LE L DN +I++ ++D +++ L +
Sbjct: 191 VVSGSSDNTIRLWDIECGACLRVLEGHEEL---VRCIRFDNKRIVSGAYDGKIKVWDLVA 247
Query: 225 G---------KMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWN 263
L+ HS V + F D ++S+S D T+ +W+
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
Score = 69.1 bits (167), Expect = 1e-13
Identities = 35/289 (12%), Positives = 91/289 (31%), Gaps = 45/289 (15%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLK------------------ 139
+ V C D Q +++G D I++W+ T + ++ L
Sbjct: 13 ETSKGVYC--LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIIT 70
Query: 140 ------------YQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRK 187
+ L+ L ++ M+ + S+ + +W +A+ +
Sbjct: 71 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITL 130
Query: 188 LEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADG 247
D+ I++AS D +++ + + ++ GH + + +
Sbjct: 131 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RD 188
Query: 248 HSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVI 307
V+S SSD T+++W+++ C + + + + + V + +
Sbjct: 189 RLVVSGSSDNTIRLWDIECGACLRVLEG------HEELVRCIRFDNKRIVSGAYDGKIKV 242
Query: 308 MNMQGQIVRSLSSGKR-----EGGDFLCCTTSPRGEWIYCVGEDMVLVV 351
++ + +G I D +++
Sbjct: 243 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILI 291
Score = 51.8 bits (122), Expect = 6e-08
Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 183 QCLRKLE--KAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVND 240
L+++ S GV C+Q+ D+ +I++ D ++I + + + GH+ V
Sbjct: 3 HSLQRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC 60
Query: 241 ITF 243
+ +
Sbjct: 61 LQY 63
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 73.3 bits (178), Expect = 8e-15
Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 12/163 (7%)
Query: 102 HVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD 161
C S DG L TG +D + W+ + Q + SL Y
Sbjct: 185 GASCIDISNDGTKLWTGGLDNTVRSWDL---------REGRQLQQHDFTSQIFSLGYCPT 235
Query: 162 SEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHG 221
E LA G +S V++ + + H V ++F+ ++ D +
Sbjct: 236 GEWLAVGMESSNVEVLHVNKPDKYQL--HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR 293
Query: 222 LKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNL 264
G + + SS V + D +++ S D ++ +
Sbjct: 294 TPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 61.7 bits (148), Expect = 5e-11
Identities = 43/265 (16%), Positives = 93/265 (35%), Gaps = 13/265 (4%)
Query: 88 PTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 147
P + V S +++ TG G ++VW+ + + + +Q + +
Sbjct: 39 PRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV---SQLDCL 94
Query: 148 LMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKL-EKAHSLGVTCIQFSRDNS 206
+ + S D L G ++ + IW +A K + + + S D+
Sbjct: 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK 154
Query: 207 QILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKT 266
+ D + + L + ++++F+GH+ + I + DG + + D TV+ W+L+
Sbjct: 155 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214
Query: 267 TECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGG 326
+ S+ P V +N V+ + +
Sbjct: 215 GRQLQQHDFTS----QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL----HLHES 266
Query: 327 DFLCCTTSPRGEWIYCVGEDMVLVV 351
L + G+W G+D +L
Sbjct: 267 CVLSLKFAYCGKWFVSTGKDNLLNA 291
Score = 56.7 bits (135), Expect = 2e-09
Identities = 23/261 (8%), Positives = 62/261 (23%), Gaps = 40/261 (15%)
Query: 81 DQEEEKYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKY 140
D + +S+ +++ + PDG LI G + +W+ R +
Sbjct: 78 DISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137
Query: 141 QAQD----------------------------------NFMLMEEAVMSLAYSRDSEMLA 166
+ + ++
Sbjct: 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197
Query: 167 SGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGK 226
+ + + + + + + + + + + V + +
Sbjct: 198 LWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD 257
Query: 227 MLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSI 286
+ H S V + F G +S D + W K +V S
Sbjct: 258 K-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSC 312
Query: 287 HLLPKNTEHFVVCNKTNTVVI 307
+ + ++ V + +
Sbjct: 313 DISV-DDKYIVTGSGDKKATV 332
Score = 44.0 bits (102), Expect = 2e-05
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 92 SKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWN 128
+ + S V S D +Y++TGS D V+
Sbjct: 298 ASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 72.6 bits (176), Expect = 1e-14
Identities = 17/144 (11%), Positives = 50/144 (34%), Gaps = 13/144 (9%)
Query: 102 HVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEA-------VM 154
+ A + + S+DG + V F + + + V
Sbjct: 196 IRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN 255
Query: 155 SLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFD 214
S+ +S + L + G + W + T + ++ K + + ++ + ++ + A+ D
Sbjct: 256 SIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE--DSVVKIACSDNILCLATSD 313
Query: 215 TYVRIHGLKSGKMLKEFRGHSSFV 238
+ + + + ++S +
Sbjct: 314 DTFKTN----AAIDQTIELNASSI 333
Score = 69.5 bits (168), Expect = 1e-13
Identities = 36/278 (12%), Positives = 88/278 (31%), Gaps = 25/278 (8%)
Query: 94 QIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAV 153
QI+ K ++ + P L+ S DG + V+ F DL + + +
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-----YKHPL 59
Query: 154 MSLAYSRDSE-MLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTAS 212
+ + +++ + G+ G++ + + L + C + +++ AS
Sbjct: 60 LCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAAS 119
Query: 213 FDTYVRIHGLKSGKMLKEFRGHSSFV------NDITFTADGHSVLSASSDGTVKMWNLKT 266
+D + + ++ + + T + ++ ++ V+ + L
Sbjct: 120 WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPL 179
Query: 267 TECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVI-------------MNMQGQ 313
E + + + LLPK E + + V + +
Sbjct: 180 CEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239
Query: 314 IVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVV 351
R SPR +++Y G D ++
Sbjct: 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISC 277
Score = 69.5 bits (168), Expect = 1e-13
Identities = 26/176 (14%), Positives = 53/176 (30%), Gaps = 19/176 (10%)
Query: 102 HVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD 161
+ + LI G + ++ + + + L + ++
Sbjct: 150 KNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE----DDNGTIEESGLKYQIRDVALLPKE 205
Query: 162 SEMLASGSQSGKVKIWKIATGQCLRKLEK--------------AHSLGVTCIQFSRDNSQ 207
E A S G+V + K + V I+FS +
Sbjct: 206 QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF 265
Query: 208 ILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWN 263
+ TA D + L++ K +K F + + + + + A+SD T K
Sbjct: 266 LYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKIACSDNILCLATSDDTFKTNA 320
Score = 61.8 bits (148), Expect = 5e-11
Identities = 8/88 (9%), Positives = 29/88 (32%)
Query: 226 KMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNS 285
++++ + +++DI +L S DG++ ++ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 286 IHLLPKNTEHFVVCNKTNTVVIMNMQGQ 313
+ + V ++ +++ G
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGS 89
Score = 48.7 bits (114), Expect = 7e-07
Identities = 16/82 (19%), Positives = 23/82 (28%), Gaps = 9/82 (10%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLA 157
V FSP ++L T DG I WN T K K+ +
Sbjct: 249 NLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA---------KFNEDSVVK 299
Query: 158 YSRDSEMLASGSQSGKVKIWKI 179
+ +L + K
Sbjct: 300 IACSDNILCLATSDDTFKTNAA 321
Score = 31.7 bits (70), Expect = 0.17
Identities = 3/33 (9%), Positives = 8/33 (24%)
Query: 96 KFGSKSHVECARFSPDGQYLITGSVDGFIEVWN 128
F + + + L + D +
Sbjct: 288 NFAKFNEDSVVKIACSDNILCLATSDDTFKTNA 320
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 71.0 bits (172), Expect = 5e-14
Identities = 37/343 (10%), Positives = 104/343 (30%), Gaps = 65/343 (18%)
Query: 109 SPDGQYLITGSVDGFIEVWNFTTGK----IRKDLKYQAQDNFMLMEEAVMSLA-YSRDSE 163
S + ++ S DG+++VW+ K + + + + + ++ + +
Sbjct: 21 SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80
Query: 164 MLASGSQSGKVKIWKIATGQCLRKL---------EKAHSLGVTCIQFSRDNSQ-----IL 209
++A+ S SG + ++I +K+ +++ N + ++
Sbjct: 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 140
Query: 210 TASFDTYVRIHGLKSGKM------------------LKEFRGHSSFVNDITFTADGHSVL 251
I ++ S F + + G +
Sbjct: 141 ATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGL-IA 199
Query: 252 SASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVC------------ 299
+ ++GTV++ L T F+S + NSI + + + ++
Sbjct: 200 TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 259
Query: 300 ----NKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVVRLIQ 355
+ +++ ++ + + + GE + G D +R
Sbjct: 260 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG--KLRFWD 317
Query: 356 QYLKESNLMKTLQCLQEETGVSLNTVDSVDGFIADINNGHWDT 398
+KT + + + ++ + +A +G
Sbjct: 318 --------VKTKERITTLNMHC-DDIEIEEDILAVDEHGDSLA 351
Score = 69.5 bits (168), Expect = 2e-13
Identities = 31/219 (14%), Positives = 70/219 (31%), Gaps = 25/219 (11%)
Query: 84 EEKYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQ 143
Q + + S G + TG +G +++ +T + + +++Q
Sbjct: 168 SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYN--FESQ 224
Query: 144 DNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLE-------------- 189
+ + ++ S+ +S +LA S + + ++
Sbjct: 225 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLG 284
Query: 190 -KAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVND----ITFT 244
AHS V + F+ + +A +D +R +K+ + + H + +
Sbjct: 285 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVD 344
Query: 245 ADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAV 283
G S+ G + LK + L S V
Sbjct: 345 EHGDSLAEP---GVFDVKFLKKGWRSGMGADLNESLCCV 380
Score = 61.8 bits (148), Expect = 6e-11
Identities = 40/213 (18%), Positives = 70/213 (32%), Gaps = 37/213 (17%)
Query: 98 GSKSHVECARFSPDG-----QYLITGSVDGFIEVWNF-TTGKIRKDLKYQAQDNFMLMEE 151
K ++ L+ V G +W F L L
Sbjct: 117 MKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGT 176
Query: 152 A---------VMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSL-----GVT 197
S+ S ++A+G +G V+I +++T + L E HS+ +
Sbjct: 177 VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 235
Query: 198 CIQFSRDNSQILTASFDTYVRIH----------------GLKSGKMLKEFRGHSSFVNDI 241
++FS S + A S + HSS+V +
Sbjct: 236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 295
Query: 242 TFTADGHSVLSASSDGTVKMWNLKTTECTSTFK 274
+F G ++ SA DG ++ W++KT E +T
Sbjct: 296 SFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 328
Score = 58.3 bits (139), Expect = 7e-10
Identities = 24/197 (12%), Positives = 52/197 (26%), Gaps = 35/197 (17%)
Query: 175 KIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGK------ML 228
K++ IAT KAH + + NS ++ S D Y+++ K
Sbjct: 1 KVF-IATANAG----KAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKS 53
Query: 229 KEFRGHSSFVNDITF-------TADGHSVLSASSDGTVKMWNLKTTECTSTFK------- 274
H S ++ + + V + S G + + + + T
Sbjct: 54 YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLL 113
Query: 275 SLGASDIAVNSIHLLP----KNTEHFVVCNKTNTVVIMNMQG----QIVRSLSSGKREGG 326
+ ++ + V + T I +L+
Sbjct: 114 DSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 173
Query: 327 DFLCCTTSPRGEWIYCV 343
+ ++ V
Sbjct: 174 QGTVESPMTPSQFATSV 190
Score = 57.9 bits (138), Expect = 9e-10
Identities = 35/309 (11%), Positives = 89/309 (28%), Gaps = 45/309 (14%)
Query: 105 CARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQD--NFMLMEEAVMSLAYSRDS 162
R + + + T S G + + T K + ++ D + + + + +L + +
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 131
Query: 163 E-----MLASGSQSGKVKIWKIATGQCLRKLEKAHSLG-----------------VTCIQ 200
+ L + G IWK + T +
Sbjct: 132 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVD 191
Query: 201 FSRDNSQILTASFDTYVRI------HGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSAS 254
S I T + V+I L + + +S+ + + F+ G + A
Sbjct: 192 ISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 250
Query: 255 SDGTV---KMWNLKTTECTSTFKSLGASDIAVNSIHLLPK---------NTEHFVVCNKT 302
+ ++ + E + S A + E
Sbjct: 251 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 310
Query: 303 NTVVIMNMQ-GQIVRSLSSGKRE-GGDFLCCTTSPRGEWIYCVGEDMVLVVRLIQQYLKE 360
+ +++ + + +L+ + + G+ + G V ++ +
Sbjct: 311 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMG 370
Query: 361 SNLMKTLQC 369
++L ++L C
Sbjct: 371 ADLNESLCC 379
Score = 47.5 bits (111), Expect = 2e-06
Identities = 15/125 (12%), Positives = 35/125 (28%), Gaps = 13/125 (10%)
Query: 231 FRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFK--------SLGASDIA 282
+ H + + ++ +S S DG +K+W+ K + + G +
Sbjct: 10 GKAHDADIFSVSACNSF--TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 283 -VNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIY 341
+ +I + + ++ + + E D L W
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRITRE--DETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 342 CVGED 346
G
Sbjct: 126 KWGAS 130
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 67.6 bits (163), Expect = 6e-13
Identities = 27/167 (16%), Positives = 62/167 (37%), Gaps = 7/167 (4%)
Query: 150 EEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQIL 209
+V++ + + +G+ ++++ + L +L H GV ++++ ++
Sbjct: 12 MTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGG-ILV 68
Query: 210 TASFDTYVRIHGLKSGKMLKEFRGH--SSFVNDITFTADGHSVLSASSDGTVKMWNLKTT 267
+ S D VR+ +K G F GH + DI + +++ S D T+ +W L
Sbjct: 69 SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 128
Query: 268 ECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQI 314
+ ++ P +V ++ G I
Sbjct: 129 SSVPDHGEEHDYPLVFHTPEENPYFVGVL--RGHMASVRTVSGHGNI 173
Score = 59.5 bits (142), Expect = 3e-10
Identities = 20/137 (14%), Positives = 42/137 (30%), Gaps = 9/137 (6%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLA 157
G + V + Y+ITG+ D I V++ K L + V +L
Sbjct: 10 GHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGH--------DGGVWALK 60
Query: 158 YSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYV 217
Y+ +++ + ++ I ++ I+T S D +
Sbjct: 61 YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120
Query: 218 RIHGLKSGKMLKEFRGH 234
+ L + +
Sbjct: 121 HVWKLPKESSVPDHGEE 137
Score = 56.8 bits (135), Expect = 2e-09
Identities = 8/81 (9%), Positives = 24/81 (29%), Gaps = 2/81 (2%)
Query: 140 YQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCI 199
++ + +L SGS+ + I+ + +G+ + + + +
Sbjct: 272 DYSRKFSYHHTNLSAITTFYVSDNILVSGSE-NQFNIYNLRSGKLVHANILKDADQIWSV 330
Query: 200 QFSRDNSQILTASFDTYVRIH 220
F + D +
Sbjct: 331 NFKGKT-LVAAVEKDGQSFLE 350
Score = 55.7 bits (132), Expect = 4e-09
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Query: 195 GVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLK-EFRGHSSFVNDITFTADGHSVLSA 253
++ I + IL + + I+ L+SGK++ + + + F V +
Sbjct: 283 NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAAV 341
Query: 254 SSDGTVKMWNL 264
DG + L
Sbjct: 342 EKDGQSFLEIL 352
Score = 53.0 bits (125), Expect = 3e-08
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 190 KAHSLGV-TCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGH 248
+ H V TC+QF +++ ++T + D +R++ + K L + GH V + + G
Sbjct: 9 RGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66
Query: 249 SVLSASSDGTVKMWNLKTTEC 269
++S S+D TV++W++K C
Sbjct: 67 -LVSGSTDRTVRVWDIKKGCC 86
Score = 42.6 bits (98), Expect = 6e-05
Identities = 32/220 (14%), Positives = 70/220 (31%), Gaps = 17/220 (7%)
Query: 88 PTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 147
P + + S G +++GS D + VW+ K L +
Sbjct: 147 PEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYS 206
Query: 148 LMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQ 207
+ Y + + S S ++IW + G+ + L+ + S
Sbjct: 207 TI--------YDHERKRCISASMDTTIRIWDLENGELMYTLQGHT-----ALVGLLRLSD 253
Query: 208 ILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTT 267
S I G + ++F H + ++ IT ++L + S+ ++NL++
Sbjct: 254 KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSG 313
Query: 268 ECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVI 307
+ + + S++ K K +
Sbjct: 314 KLVHAN--ILKDADQIWSVNFKGKTL--VAAVEKDGQSFL 349
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 67.1 bits (162), Expect = 9e-13
Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 18/168 (10%)
Query: 96 KFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIR----KDLKYQAQDNFMLMEE 151
+ + +S L+ + G I + ++G + + +A+
Sbjct: 190 HPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249
Query: 152 AVMSLAYSRDSEML----------ASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQF 201
+AY R + + + S V + TG+ L K E + I
Sbjct: 250 GWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE--MGHEIDSINV 307
Query: 202 SRDNSQIL--TASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADG 247
S+D +L ++ D + IH +SG+ L+ IT G
Sbjct: 308 SQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 57.1 bits (136), Expect = 2e-09
Identities = 26/276 (9%), Positives = 68/276 (24%), Gaps = 42/276 (15%)
Query: 108 FSPDGQYLI-----TGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDS 162
+PD + + + V + G++ M+ + + + D
Sbjct: 9 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG----------MIDGGFLPNPVVADDG 58
Query: 163 EMLA----------SGSQSGKVKIWKIATGQCLRKLEK------AHSLGVTCIQFSRDNS 206
+A G ++ V+++ T +E + D
Sbjct: 59 SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK 118
Query: 207 QILTASF--DTYVRIHGLKSGKMLKEFRGHSSF-------VNDITFTADGHSVLSASS-D 256
+L F V + L+ + + DG A +
Sbjct: 119 TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTE 178
Query: 257 GTVKMWNLKTTECTSTFK-SLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIV 315
GT ++ + + F + A + + + + + +
Sbjct: 179 GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALT 238
Query: 316 RSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVV 351
+ + G + + IY + +
Sbjct: 239 EAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR 274
Score = 53.3 bits (126), Expect = 3e-08
Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 12/113 (10%)
Query: 94 QIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAV 153
Q ++ + F+ V + TG+ + M +
Sbjct: 252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---------MGHEI 302
Query: 154 MSLAYSRDSE--MLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRD 204
S+ S+D + + A + + I +G+ LR + G I +
Sbjct: 303 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV-NQLGHGPQVITTADM 354
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 66.1 bits (159), Expect = 2e-12
Identities = 37/275 (13%), Positives = 79/275 (28%), Gaps = 54/275 (19%)
Query: 89 TQLSKQIKFGSKSHVECARFSP--DGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNF 146
Q S V +FSP QYL +G G + VW +T K ++ + F
Sbjct: 52 VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF 111
Query: 147 MLMEEAVMSLAYSRDSEMLA--SGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRD 204
++ + +++ + L + +G L ++ C
Sbjct: 112 QVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR 171
Query: 205 NSQILTASFDTYVRIHGLKSGK---MLKEFRGHSSFVNDITFT----------------- 244
+ +T D V + K + SFV D+ F+
Sbjct: 172 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 231
Query: 245 -----------------------------ADGHSVLSASSDGTVKMWNLKTTECTSTFKS 275
D + +D T+++W++ T++C +
Sbjct: 232 CFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT- 290
Query: 276 LGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNM 310
L + + ++ + + T+ +
Sbjct: 291 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 61.5 bits (147), Expect = 6e-11
Identities = 30/312 (9%), Positives = 80/312 (25%), Gaps = 64/312 (20%)
Query: 99 SKSHVECARFSPDGQYLITGSVDG-FIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLA 157
++ + P + F+ + K+ +++ + V ++
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGS-----SVVTTVK 70
Query: 158 YS--RDSEMLASGSQSGKVKIWKIATGQCLRKL-------EKAHSLGVTCIQFSRDNSQI 208
+S + S+ L SG +SGKV +W + + + + ++ I + + ++
Sbjct: 71 FSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL 130
Query: 209 LTASFDTYVRIHGLKSGKMLKE-------------------------------------- 230
+
Sbjct: 131 CVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGP 190
Query: 231 ----------FRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASD 280
SFV D+ F+ D + + +
Sbjct: 191 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP 250
Query: 281 IAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQ-GQIVRSLSSGKREGGDFLCCTTSPRGEW 339
+ L +++ F T+ + ++ + V+ + K++ G+ +
Sbjct: 251 VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR 310
Query: 340 IYCVGEDMVLVV 351
I + D L
Sbjct: 311 IISLSLDGTLNF 322
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 64.6 bits (156), Expect = 6e-12
Identities = 18/233 (7%), Positives = 52/233 (22%), Gaps = 25/233 (10%)
Query: 106 ARFSPDGQYLI----------TGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMS 155
A G G ++EV++ T D++ F + +
Sbjct: 70 AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI- 128
Query: 156 LAYSRD-SEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVT------CIQFSRDNSQI 208
+ + +L S + + + A + S S
Sbjct: 129 IGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLA 188
Query: 209 LTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTE 268
+ + + G V + +S
Sbjct: 189 ASDLAAAPAAAG----IVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGAT 244
Query: 269 CTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSG 321
+ ++ + + + T+ ++I+ ++ ++
Sbjct: 245 MKAAID---GNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAE 294
Score = 56.1 bits (134), Expect = 3e-09
Identities = 20/207 (9%), Positives = 49/207 (23%), Gaps = 29/207 (14%)
Query: 101 SHVECARFSPDGQ-YLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYS 159
C P GS + + + + +
Sbjct: 163 KSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAA--AGIVGAQCTGAQNCSSQAAQAN 220
Query: 160 RDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDT---- 215
++ + + S A ++ + G F Q++ +T
Sbjct: 221 YPGMLVWAVASSILQGDIPAAGATMKAAID-GNESGRKADNFRSAGFQMVAKLKNTDGIM 279
Query: 216 ---------------YVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASS--DGT 258
G+ + + I DG S A+S
Sbjct: 280 ILTVEHSRSCLAAAENTSSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEV 338
Query: 259 VKMWNLKTTECTSTFKSLGA--SDIAV 283
+ +++ + + S+ + L ++V
Sbjct: 339 LDIYDAASDQDQSSVE-LDKGPESLSV 364
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 64.8 bits (157), Expect = 7e-12
Identities = 35/272 (12%), Positives = 76/272 (27%), Gaps = 28/272 (10%)
Query: 164 MLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLK 223
+ +G++ + +T + L+ + V + S + D V + L
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLW 91
Query: 224 SGKM-----LKEFRGHSSFVNDITFTADGHSVL-SASSDGTVKMWNLKTTECTSTFKSLG 277
+ +K S + + A + + +T E + G
Sbjct: 92 MKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG 151
Query: 278 AS--------DIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQ---------GQIVRSLSS 320
+ + V +I E V +T +++++ R L
Sbjct: 152 MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHD 211
Query: 321 GKREGGDFLCCTTSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQEETGVSLNT 380
G +G T + + + +V + + + + + G T
Sbjct: 212 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWAT 271
Query: 381 VDSVDGFIADIN---NGHWDTVLKSVQSLKLP 409
D +A I GH D K + S
Sbjct: 272 SHMGDDSVALIGTDPEGHPDNAWKILDSFPAL 303
Score = 57.5 bits (138), Expect = 2e-09
Identities = 30/228 (13%), Positives = 71/228 (31%), Gaps = 26/228 (11%)
Query: 108 FSPDGQ--YLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEML 165
D + + +T G I + + +T +I+ L AV S L
Sbjct: 26 NDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLD---------TGYAVHISRLSASGRYL 76
Query: 166 ASGSQSGKVKIWKIATGQCLRKLE----KAHSLGVTCIQFSRDNSQIL-TASFDTYVRIH 220
+ GKV + + + E T ++ + A + I
Sbjct: 77 FVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM 136
Query: 221 GLKSGKMLKEFRGHSSFVNDITFTADGHSV-LSASSDGTVKMWNLKTTEC-----TSTFK 274
++ + K ++ + + + AS + N+K T +
Sbjct: 137 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN 196
Query: 275 SLGASDIAV----NSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSL 318
+L ++I+ + L + N N +V+++ + + ++
Sbjct: 197 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI 244
Score = 57.1 bits (137), Expect = 2e-09
Identities = 23/187 (12%), Positives = 53/187 (28%), Gaps = 18/187 (9%)
Query: 90 QLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLM 149
++ + G V +R S G+YL DG + + + + + +
Sbjct: 53 EIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE---A 107
Query: 150 EEAVMSLAYSRDSEML-ASGSQSGKVKIWKIATGQCLR----------KLEKAHSLGVTC 198
S + + A + I T + + + E V
Sbjct: 108 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA 167
Query: 199 IQFSRDNSQILTASFDT-YVRIHGLKSGKMLKEFRGHS-SFVNDITFTADGHSVLSASSD 256
I S + + +T + + LK + F++D ++A++
Sbjct: 168 ILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA 227
Query: 257 GTVKMWN 263
+
Sbjct: 228 RNKLVVI 234
Score = 53.6 bits (128), Expect = 2e-08
Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 5/157 (3%)
Query: 199 IQFSRDNSQIL--TASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSD 256
D + T + + + ++ + V+ +A G + D
Sbjct: 24 QMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRD 82
Query: 257 GTVKMWNLKTTECT--STFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQI 314
G V M +L E T + K + S ++ VIM+ +
Sbjct: 83 GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 142
Query: 315 VRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVV 351
+ + S + D PR I +V
Sbjct: 143 PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 179
Score = 27.8 bits (61), Expect = 3.2
Identities = 8/93 (8%), Positives = 26/93 (27%), Gaps = 16/93 (17%)
Query: 96 KFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMS 155
++ + + D + + D + + + V+
Sbjct: 324 TLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQ-----------PRVVQ 372
Query: 156 LAYSRD-SEMLAS----GSQSGKVKIWKIATGQ 183
+++D +E+ S Q + + T +
Sbjct: 373 GEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 405
Score = 27.1 bits (59), Expect = 5.9
Identities = 15/175 (8%), Positives = 41/175 (23%), Gaps = 15/175 (8%)
Query: 93 KQIKFGSKSHVECARFSPDGQYLITGSVDGF-IEVWNFTTGKIRKDLKYQAQDNFMLMEE 151
K + ++ + +Y IT + + V + GK+ Q
Sbjct: 199 KTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA 258
Query: 152 AVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTA 211
+ + G + I T + ++ + + +
Sbjct: 259 NFVHPTFGPVWATSHMGDD----SVALIGTDP---EGHPDNAWKILDSFPALGGGSLFIK 311
Query: 212 SFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKT 266
+ + + + + D ++ SD K +
Sbjct: 312 THPN------SQYLYVDATLNPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAE 359
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 63.4 bits (152), Expect = 1e-11
Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Query: 105 CARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEM 164
R++PDG + DG I ++N G + +V L +S D
Sbjct: 194 SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV-FEDDSLKNVAHSGSVFGLTWSPDGTK 252
Query: 165 LASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRI 219
+AS S +KIW +AT + + + + + +++ S + ++
Sbjct: 253 IASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINF 307
Score = 58.8 bits (140), Expect = 4e-10
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 101 SHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSR 160
V +SPDG + + S D I++WN T K+ K + + L
Sbjct: 239 GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI-------EDQQLGIIW 291
Query: 161 DSEMLASGSQSGKVKIW 177
+ L S S +G +
Sbjct: 292 TKQALVSISANGFINFV 308
Score = 57.6 bits (137), Expect = 8e-10
Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 198 CIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDIT-FTADGHSVLSASSD 256
+ +S D ++I +AS D ++I + + K+ K + + +++S S++
Sbjct: 243 GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 302
Query: 257 GTVKMWNL 264
G + N
Sbjct: 303 GFINFVNP 310
Score = 57.2 bits (136), Expect = 1e-09
Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Query: 196 VTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASS 255
+ + +I + + V + S + + HS + G+ S
Sbjct: 20 AVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
Query: 256 DGTVKMWNLKTTEC 269
G V++W+ T
Sbjct: 79 HGNVRIWDTTQTTH 92
Score = 56.8 bits (135), Expect = 2e-09
Identities = 38/258 (14%), Positives = 73/258 (28%), Gaps = 48/258 (18%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQA--------------- 142
A+ SP G Y +G V G + +W+ T
Sbjct: 56 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK 115
Query: 143 -----------------------QDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKI 179
N A+ S+ +
Sbjct: 116 RIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFE 175
Query: 180 ATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKE-------FR 232
+ H+ V ++++ D S + D + ++ G
Sbjct: 176 GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV 235
Query: 233 GHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKN 292
HS V +T++ DG + SAS+D T+K+WN+ T + T + I + ++
Sbjct: 236 AHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP--VGTRIEDQQLGIIWTK 293
Query: 293 TEHFVVCNKTNTVVIMNM 310
+ V + + +N
Sbjct: 294 -QALVSISANGFINFVNP 310
Score = 54.9 bits (130), Expect = 7e-09
Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 4/93 (4%)
Query: 153 VMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTAS 212
+ L + + + + V + + HS T + S +
Sbjct: 20 AVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIY-TEHSHQTTVAKTSPSGYYCASGD 77
Query: 213 FDTYVRIHGLKSG--KMLKEFRGHSSFVNDITF 243
VRI + S V DI++
Sbjct: 78 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISW 110
Score = 44.5 bits (103), Expect = 2e-05
Identities = 35/307 (11%), Positives = 68/307 (22%), Gaps = 21/307 (6%)
Query: 99 SKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAY 158
++ +P G + + + + +
Sbjct: 16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEH--------SHQTTVAKT 66
Query: 159 SRDSEMLASGSQSGKVKIWKIATG-QCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYV 217
S ASG G V+IW L+ S V I + ++ +I
Sbjct: 67 SPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRER 126
Query: 218 RIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLG 277
H + S + + G
Sbjct: 127 FGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG 186
Query: 278 ASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGK----REGGDFLCCTT 333
V+S+ P + V+ + G G T
Sbjct: 187 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 246
Query: 334 SPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQEETGVSLNTVDSVDGFIADINN 393
SP G I D +++ + + KT+ L + + ++ N
Sbjct: 247 SPDGTKIASASADK--TIKIWN--VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 302
Query: 394 GH---WD 397
G +
Sbjct: 303 GFINFVN 309
Score = 43.0 bits (99), Expect = 5e-05
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 90 QLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWN 128
++ K I G++ + Q L++ S +GFI N
Sbjct: 271 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 62.3 bits (149), Expect = 3e-11
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 225 GKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFK 274
G + + GH+ + ++ +ADG ++ SA ++G + W++ T F
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP 51
Score = 61.9 bits (148), Expect = 4e-11
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 2/122 (1%)
Query: 150 EEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQIL 209
+A+ +L+ S D + L S G + W I+TG R H+ +T I+ +
Sbjct: 12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 210 TASFDT--YVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTT 267
+ D V G SS + +ADG ++A + K T
Sbjct: 72 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 131
Query: 268 EC 269
E
Sbjct: 132 EV 133
Score = 58.5 bits (139), Expect = 4e-10
Identities = 17/131 (12%), Positives = 41/131 (31%), Gaps = 3/131 (2%)
Query: 182 GQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFR-GHSSFVND 240
G + H+ +T + S D + +A + ++ + +G + F H++ +
Sbjct: 2 GSIDQVRY-GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 60
Query: 241 ITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCN 300
I T + + S D +K+ + S+ + + C
Sbjct: 61 IKTT-SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY 119
Query: 301 KTNTVVIMNMQ 311
K +
Sbjct: 120 KHIAIYSHGKL 130
Score = 53.1 bits (125), Expect = 2e-08
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 93 KQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLK 139
Q+++G + S DG+ L + +G I W+ +TG +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP 51
Score = 48.4 bits (113), Expect = 8e-07
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 7/167 (4%)
Query: 100 KSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYS 159
+ C S D Q++ G D + V+ + + + + +
Sbjct: 136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLV 195
Query: 160 RDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRI 219
+ + H+ V C+ +S DN ++ T S D V +
Sbjct: 196 ATDQS-----RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 250
Query: 220 HGLKSGK--MLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNL 264
+ + H+ + + +++SA D +K WN+
Sbjct: 251 WNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 38.8 bits (88), Expect = 0.001
Identities = 7/45 (15%), Positives = 14/45 (31%)
Query: 86 KYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFT 130
P+ IK + + +++ D I+ WN
Sbjct: 254 NKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
Score = 34.6 bits (77), Expect = 0.019
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 248 HSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVI 307
+ + S D +V +WN+ + +VNS+ L + T V + + +
Sbjct: 237 VRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT--IVSAGQDSNIKF 294
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 62.3 bits (150), Expect = 3e-11
Identities = 21/232 (9%), Positives = 45/232 (19%), Gaps = 46/232 (19%)
Query: 87 YPTQLSKQIKFGSKSHVECARFSPDGQYL-ITGSVDG-FIEVWNFTTGKIRKDLKYQAQD 144
+ C P G G + V GK K A
Sbjct: 101 TVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFI 160
Query: 145 NFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQ-CLRKLEKAHSLGVTCIQFSR 203
+ + SR + G V+ + + K + +
Sbjct: 161 DVDKD---PAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRP 217
Query: 204 DNSQILTASFD------------------------------TYVRIHGLKSGKMLKEFRG 233
Q + + ++
Sbjct: 218 GGMQQTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLVS 277
Query: 234 HSSFVNDITFTADGHSVL--SASSDGTVKMWNLKTTECTSTFKSLGASDIAV 283
I + D + ++ V + + +T K +G + +
Sbjct: 278 -------IQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTSSLL 321
Score = 61.2 bits (147), Expect = 6e-11
Identities = 34/240 (14%), Positives = 69/240 (28%), Gaps = 26/240 (10%)
Query: 90 QLSKQIKFGSKSHVECARFSPDGQYL----------ITGSVDGFIEVWNFTTGKIRKDLK 139
+L QI G +PD + G+ +E+ + TT ++
Sbjct: 9 KLLGQIDGGFGPGFA---IAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIV 65
Query: 140 YQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCI 199
A+ + + A+S D + L + + + I E C+
Sbjct: 66 IPAKHAQ--HVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEID---TAACV 120
Query: 200 QFSRDNSQILTASFDTY--VRIHGLKSGKMLKEF---RGHSSFVNDITFTADGHS--VLS 252
TA ++ + + +GK K + A + L
Sbjct: 121 LAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLF 180
Query: 253 ASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQG 312
+ G V+ + + +D A + P + V K N ++ +G
Sbjct: 181 TTYGGNVRSADFSGDKPAFGKPWSLLTD-AERAEGWRPGGMQQTAVQAKQNRYYVLMHKG 239
Score = 54.6 bits (130), Expect = 7e-09
Identities = 13/201 (6%), Positives = 39/201 (19%), Gaps = 10/201 (4%)
Query: 159 SRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTC--IQFSRDNSQ-ILTASF-- 213
+ + G+++ V+I T ++ + ++
Sbjct: 35 TTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANI 94
Query: 214 DTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVL-SASSDG-TVKMWNLKTTECTS 271
+ + + + G + G + + +
Sbjct: 95 TPAASVTVIDAVSKKML--SEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAK 152
Query: 272 TFKSLGASDIAVNSIHLLPKNTE-HFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLC 330
S D+ + + + ++ V + G
Sbjct: 153 RTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERA 212
Query: 331 CTTSPRGEWIYCVGEDMVLVV 351
P G V
Sbjct: 213 EGWRPGGMQQTAVQAKQNRYY 233
Score = 47.3 bits (111), Expect = 2e-06
Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 18/137 (13%)
Query: 222 LKSGKMLKEFRGHSSFVNDITFTADGHSVLSASS----------DGTVKMWNLKTTECTS 271
+ K+L + G F D + + A++ V++ + T +
Sbjct: 5 ADAKKLLGQIDGG--FGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAG 62
Query: 272 TFKSLGASDIAVNSIHLLPKNTEHFVVCN--KTNTVVIMNMQGQIVRSLSSGKREGGDFL 329
V S + + + + T + + + LS E
Sbjct: 63 EIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLS----EIDTAA 118
Query: 330 CCTTSPRGEWIYCVGED 346
C P G+ + +
Sbjct: 119 CVLAYPAGDDRFTALCE 135
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 60.7 bits (146), Expect = 1e-10
Identities = 21/199 (10%), Positives = 64/199 (32%), Gaps = 15/199 (7%)
Query: 156 LAYSRDSE--MLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASF 213
D + +G++ + + + ++ ++ V + S +L
Sbjct: 24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID--TGYAVHISRMSASGRYLLVIGR 81
Query: 214 DTYVRIHGLKSGKM-----LKEFRGHSSFVNDITFTADGHSVLSAS-SDGTVKMWNLKTT 267
D + + L + + +K S + + ++ + + + +T
Sbjct: 82 DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 141
Query: 268 ECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGD 327
E + G + V++ P+ ++ + + I+N++ + + D
Sbjct: 142 EPKQIVSTRGMT---VDTQTYHPEPRVAAIIASHEHPEFIVNVKET--GKVLLVNYKDID 196
Query: 328 FLCCTTSPRGEWIYCVGED 346
L T+ ++ G D
Sbjct: 197 NLTVTSIGAAPFLADGGWD 215
Score = 59.6 bits (143), Expect = 4e-10
Identities = 22/168 (13%), Positives = 50/168 (29%), Gaps = 17/168 (10%)
Query: 108 FSPDGQ--YLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEML 165
D + +T G I + + + KI K + AV S L
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID---------TGYAVHISRMSASGRYL 76
Query: 166 ASGSQSGKVKIWKIATGQCLRKLE----KAHSLGVTCIQFSRD-NSQILTASFDTYVRIH 220
+ ++ + + + + E + + I A + I
Sbjct: 77 LVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 136
Query: 221 GLKSGKMLKEFRGHSSFVNDITFTADGH-SVLSASSDGTVKMWNLKTT 267
++ + + V+ T+ + + + AS + + N+K T
Sbjct: 137 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 184
Score = 54.2 bits (129), Expect = 2e-08
Identities = 18/168 (10%), Positives = 46/168 (27%), Gaps = 4/168 (2%)
Query: 96 KFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMS 155
+ V +R S G+YL+ D I++ + + K + + S
Sbjct: 57 VIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIE---ARSVESS 113
Query: 156 LAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNS-QILTASFD 214
+ +G+ +++ + V + + + AS +
Sbjct: 114 KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 173
Query: 215 TYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMW 262
I +K + +T + D + + +
Sbjct: 174 HPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYF 221
Score = 34.2 bits (77), Expect = 0.032
Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 17/141 (12%)
Query: 59 QHQGLLPPGTTIDLFRGKAAMKDQEEEKYPTQLSKQIK--FGSKSHVECARFSPDGQYLI 116
H P +T L G ++ + + +P K++ G + P +L
Sbjct: 260 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLY 319
Query: 117 -------TGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEA--VMSLAYSRD-SEMLA 166
+ + V++ + + A+ L E A V+ Y++ E+
Sbjct: 320 VDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWAD-LGEGAKRVVQPEYNKRGDEVWF 378
Query: 167 S----GSQSGKVKIWKIATGQ 183
S + S + + T +
Sbjct: 379 SVWNGKNDSSALVVVDDKTLK 399
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 58.4 bits (139), Expect = 4e-10
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 195 GVTCIQFSRDNSQILTASFDTYVRIHGLKS-GKMLKEFRGHSSFVNDITFTADGHSVLSA 253
+ + + T S DT + I+ +K K++K H VN++ + ++S+
Sbjct: 217 EKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSS 275
Query: 254 SSDGTVKMWN 263
+D +K WN
Sbjct: 276 GADACIKRWN 285
Score = 57.7 bits (137), Expect = 8e-10
Identities = 21/144 (14%), Positives = 55/144 (38%), Gaps = 4/144 (2%)
Query: 79 MKDQEEEKYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKI---R 135
Q + ++S +K ++ SP Y+ G V G I +++ + ++ R
Sbjct: 141 NTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR 200
Query: 136 KDLKYQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLG 195
+ + + + +++A+GS + I+ + + K AH G
Sbjct: 201 WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDG 260
Query: 196 VTCIQFSRDNSQILTASFDTYVRI 219
V + + + ++++ D ++
Sbjct: 261 VNNLLWETPS-TLVSSGADACIKR 283
Score = 49.2 bits (115), Expect = 4e-07
Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 12/119 (10%)
Query: 224 SGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAV 283
++LK GH+ + +T + ++S S DG + W+ + + +
Sbjct: 2 HDEVLKTISGHNKGITALTV----NPLISGSYDGRIMEWSSSSMHQDHSN--------LI 49
Query: 284 NSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIYC 342
S+ + + T V + + + G T +
Sbjct: 50 VSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQS 108
Score = 46.5 bits (108), Expect = 4e-06
Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 10/80 (12%)
Query: 101 SHVECARFSPDGQYLITGSVDGFIEVWNF-TTGKIRKDLKYQAQDNFMLMEEAVMSLAYS 159
+ + + TGS+D I +++ KI K L ++ V +L +
Sbjct: 216 AEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAH--------KDGVNNLLWE 267
Query: 160 RDSEMLASGSQSGKVKIWKI 179
S L S +K W +
Sbjct: 268 TPS-TLVSSGADACIKRWNV 286
Score = 45.0 bits (104), Expect = 9e-06
Identities = 9/68 (13%), Positives = 26/68 (38%), Gaps = 10/68 (14%)
Query: 181 TGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVND 240
+ L+ + H+ G+T + + +++ S+D + S + HS+ +
Sbjct: 2 HDEVLKTI-SGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVS 51
Query: 241 ITFTADGH 248
+ +
Sbjct: 52 LDNSKAQE 59
Score = 43.0 bits (99), Expect = 4e-05
Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 10/56 (17%)
Query: 150 EEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDN 205
+ + +L + L SGS G++ W ++ HS + + S+
Sbjct: 13 NKGITALTVNP----LISGSYDGRIMEWSSSSMHQ------DHSNLIVSLDNSKAQ 58
Score = 35.3 bits (79), Expect = 0.011
Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 15/144 (10%)
Query: 175 KIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGH 234
+++K++ + L+ + I S + I + ++ L+S ++
Sbjct: 144 QVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF 203
Query: 235 SSFVND-----------ITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAV 283
+ + + V + S D + ++++K K+L A V
Sbjct: 204 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM--KIIKALNAHKDGV 261
Query: 284 NSIHLLPKNTEHFVVCNKTNTVVI 307
N++ +T V +
Sbjct: 262 NNLLWETPST--LVSSGADACIKR 283
Score = 34.9 bits (78), Expect = 0.014
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 4/36 (11%)
Query: 98 GSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGK 133
G + +P LI+GS DG I W+ ++
Sbjct: 11 GHNKGITALTVNP----LISGSYDGRIMEWSSSSMH 42
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 47.6 bits (111), Expect = 1e-06
Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Query: 220 HGLKSGKMLKEFRGHSSFVNDITFTADGHSVL-SASSDGTVKMWNLKTTECTSTFK 274
+ K+ I T DG V + S TV + + T T+T
Sbjct: 229 IDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 44.1 bits (102), Expect = 2e-05
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 10/70 (14%)
Query: 116 ITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD-SEMLASGSQSGKV 174
I S I V + T+ K+ + + M S D +++ + + S V
Sbjct: 6 IANSESDNISVIDVTSNKVTATIP---------VGSNPMGAVISPDGTKVYVANAHSNDV 56
Query: 175 KIWKIATGQC 184
I AT
Sbjct: 57 SIIDTATNNV 66
Score = 43.7 bits (101), Expect = 3e-05
Identities = 7/40 (17%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 101 SHVECARFSPDGQYL-ITGSVDGFIEVWNFTTGKIRKDLK 139
+PDG+ + + S + V + T I +
Sbjct: 244 PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 39.1 bits (89), Expect = 8e-04
Identities = 6/38 (15%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 153 VMSLAYSRD-SEMLASGSQSGKVKIWKIATGQCLRKLE 189
+A + D ++ + S V + AT +
Sbjct: 246 PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 39.1 bits (89), Expect = 8e-04
Identities = 37/279 (13%), Positives = 85/279 (30%), Gaps = 45/279 (16%)
Query: 90 QLSKQIKFGSKSHVECARFSPDGQYL-ITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFML 148
+++ I GS + A SPDG + + + + + + T + + + +
Sbjct: 23 KVTATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA 80
Query: 149 MEEAVMSLAYSRDSEMLAS----------GSQSGKVKIWKIATGQCLRKLEK-------- 190
+ + + + S G+ +A +KL
Sbjct: 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTV 140
Query: 191 --------------AHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSS 236
+ I + D +++ A+FD+ + + +
Sbjct: 141 SVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA 200
Query: 237 FVNDITFTADGHSVLSASS---DGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNT 293
+ I +G + TV M + T + T+ I + P
Sbjct: 201 APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP----VGPDPAGIAVTPDGK 256
Query: 294 EHFVVCNKTNTVVIMNMQ-GQIVRSLSSGK--REGGDFL 329
+ +V + NTV +++ I +++ GK G F+
Sbjct: 257 KVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFI 295
Score = 37.9 bits (86), Expect = 0.002
Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
Query: 167 SGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTA-SFDTYVRIHGLKSG 225
+ S+S + + + + + + S D +++ A + V I +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIP--VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 226 KMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFK 274
++ SS ++ + T+ + + + T K
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK 113
Score = 36.8 bits (83), Expect = 0.005
Identities = 11/91 (12%), Positives = 30/91 (32%), Gaps = 4/91 (4%)
Query: 252 SASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQ 311
+ S + + ++ + + T+T +G++ + P T+ +V +N V I++
Sbjct: 7 ANSESDNISVIDVTSNKVTATIP-VGSN---PMGAVISPDGTKVYVANAHSNDVSIIDTA 62
Query: 312 GQIVRSLSSGKREGGDFLCCTTSPRGEWIYC 342
V + +
Sbjct: 63 TNNVIATVPAGSSPQGVAVSPDGKQVYVTNM 93
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 44.9 bits (106), Expect = 1e-05
Identities = 30/247 (12%), Positives = 76/247 (30%), Gaps = 39/247 (15%)
Query: 164 MLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLK 223
SG G+V++ + + + L + + V F+ D++ + ++ + G +
Sbjct: 13 GFWSGGHQGEVRVLGVPSMRELMR------IPV----FNVDSATGWGITNESKEILGGDQ 62
Query: 224 SGKMLKEFRGHSSFVNDITFTADGHSVLSASS-DGTVKMWNLKTTECTSTFKSLGASDIA 282
H S + DG + + V L + I
Sbjct: 63 QYLNGDCHHPHISMTD---GRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAI- 118
Query: 283 VNSIHLLPKNTEHFVVCNKTNTVVIMNM--------QGQIVRSLSSGKRE-------GGD 327
+ + L ++V CN + N + ++ + + G+
Sbjct: 119 -HGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGN 177
Query: 328 FLCCTTSPRGEWIY--CVGEDMVLVV----RLIQQYLKESNLMKTLQCLQEETGVSL--N 379
G++ C + + + R + ++ N+ + ++ ++ +
Sbjct: 178 LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDS 237
Query: 380 TVDSVDG 386
V VDG
Sbjct: 238 KVPVVDG 244
Score = 37.6 bits (87), Expect = 0.003
Identities = 31/234 (13%), Positives = 58/234 (24%), Gaps = 32/234 (13%)
Query: 57 WQQHQGLLPP-GTTIDLFRGKAAMKDQEEEKYPTQLSKQIKFGSKSHVECARFSPDGQYL 115
+ P GT L + E ++ Q+ ++ G+Y
Sbjct: 135 NAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMD--VAWQVIVDGN--LDNTDADYTGKYA 190
Query: 116 ITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVK 175
+ + V T R D + N + AV + G S
Sbjct: 191 TSTCYNSERAVDLAGTM--RNDRDWVVVFNVERIAAAV------KAGNFKTIGD-SKVPV 241
Query: 176 IWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTA-SFDTYVRIHGLKSGKMLKEFRGH 234
+ + R + + + S D + V + + K+ F
Sbjct: 242 VDGRGESEFTRYIPVPKN--PHGLNTSPDGKYFIANGKLSPTVSVIAID--KLDDLFEDK 297
Query: 235 ----SSFV---------NDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKS 275
+ V TF G++ + D V WN+
Sbjct: 298 IELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDR 351
Score = 34.1 bits (78), Expect = 0.036
Identities = 23/262 (8%), Positives = 55/262 (20%), Gaps = 77/262 (29%)
Query: 102 HVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD 161
H+ DG+YL
Sbjct: 73 HISMTDGRYDGKYLF--------------------------------------------- 87
Query: 162 SEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHG 221
+ + +V ++ + + + + ++ + + I
Sbjct: 88 ----INDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEF-VIPQ 142
Query: 222 LKSGKMLKEFRGHSSF-------------------VNDITFTADGHSVLSASSDGTVKMW 262
G ++ F +++ G S + +
Sbjct: 143 PNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVD 202
Query: 263 NLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGK 322
T + + + K + + VV + + R + K
Sbjct: 203 LAGTMRNDRDWVVVFNVERIA----AAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPK 258
Query: 323 REGGDFLCCTTSPRGEWIYCVG 344
G TSP G++ G
Sbjct: 259 NPHG----LNTSPDGKYFIANG 276
Score = 29.1 bits (65), Expect = 1.4
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 3/32 (9%)
Query: 98 GSKSHVECARFSPDGQYLITG---SVDGFIEV 126
G DG++L+ S D F+ V
Sbjct: 366 GHNHASLTESRDADGKWLVVLSKFSKDRFLPV 397
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 40.2 bits (93), Expect = 4e-04
Identities = 20/236 (8%), Positives = 61/236 (25%), Gaps = 17/236 (7%)
Query: 88 PTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 147
+ + ++ + + F P YL + + ++W + + D
Sbjct: 132 LEKNVQNYEYQENTGIHGMVFDPTETYLYSADL-TANKLWTHRKLASGEVELVGSVDAPD 190
Query: 148 LMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQ 207
+ + + + A ++ + I + HS + + +
Sbjct: 191 PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT-HMPVYTHHSFPLIPPGIPDRDPE 249
Query: 208 ILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTT 267
+ SGK + + + +
Sbjct: 250 TGKGLYRAD-VCALTFSGKYMF-------ASSRANKFELQGYIAGFKLRDCGSIEKQLFL 301
Query: 268 ECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCN-KTNTVVIMNMQGQIVRSLSSGK 322
T T S N++ P + E + + + + I + + + ++ +
Sbjct: 302 SPTPT------SGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVARVR 351
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 37.9 bits (86), Expect = 0.002
Identities = 11/85 (12%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Query: 228 LKEFRGHSSFVNDITFTADGHSVLSASS-DGTVKMWNLKTTECTSTFKSLGASDIAVNSI 286
L + V + + D + + V + + + TF + A ++ I
Sbjct: 29 LTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHI 88
Query: 287 HLLPKNTEHFVVCNKTNTVVIMNMQ 311
+ FV V + ++
Sbjct: 89 STDHQGQFVFVGSYNAGNVSVTRLE 113
Score = 32.1 bits (71), Expect = 0.14
Identities = 18/258 (6%), Positives = 60/258 (23%), Gaps = 24/258 (9%)
Query: 108 FSPDGQYL-ITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD----- 161
SPD +YL + + + + ++ + ++ ++
Sbjct: 44 VSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-----LPGSLTHISTDHQGQFVF 98
Query: 162 --SEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRI 219
S + S + + + L+ HS ++ + + +
Sbjct: 99 VGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 158
Query: 220 HGLKSGKMLKEFRG--HSSFVNDITFTADGHSVLSASSDG--------TVKMWNLKTTEC 269
+ + F + + N++ +
Sbjct: 159 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT 218
Query: 270 TSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFL 329
+ IH+ P + + + + ++ G +
Sbjct: 219 LDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQP 278
Query: 330 CC-TTSPRGEWIYCVGED 346
G+++ G+
Sbjct: 279 RGFNVDHSGKYLIAAGQK 296
Score = 31.7 bits (70), Expect = 0.20
Identities = 8/100 (8%), Positives = 25/100 (25%), Gaps = 10/100 (10%)
Query: 196 VTCIQFSRDNSQILTASF-DTYVRIHGLKSGKMLKEFRGHSS---FVNDITFTADGHSVL 251
I + D + + + + + + G G ++
Sbjct: 232 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLI 291
Query: 252 SASSD-GTVKMW--NLKTTECTSTFKSL---GASDIAVNS 285
+A + ++ + + G + VN+
Sbjct: 292 AAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 331
Score = 30.2 bits (66), Expect = 0.52
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 3/31 (9%)
Query: 108 FSPDGQYLI-TGSVDGFIEVW--NFTTGKIR 135
G+YLI G I V+ G +
Sbjct: 283 VDHSGKYLIAAGQKSHHISVYEIVGEQGLLH 313
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 34.3 bits (77), Expect = 0.029
Identities = 8/112 (7%), Positives = 27/112 (24%), Gaps = 5/112 (4%)
Query: 236 SFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEH 295
+F+ ++ DG ++ G + ++ V+ +
Sbjct: 28 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHATVEG---KVSGLAFTSNGDLV 82
Query: 296 FVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDM 347
N + V+ ++ + T +++
Sbjct: 83 ATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRG 134
Score = 28.9 bits (63), Expect = 1.3
Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 88 PTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFM 147
P ++ + +E +PDG +T G I G +
Sbjct: 17 PAKIITSFPVNT--FLENLASAPDGTIFVTNHEVGEIVSIT-PDGNQQ---------IHA 64
Query: 148 LMEEAVMSLAYSRDSEMLASGSQSGKVKIW 177
+E V LA++ + +++A+G + + +
Sbjct: 65 TVEGKVSGLAFTSNGDLVATGWNADSIPVV 94
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain
{Methylobacterium extorquens [TaxId: 408]}
Length = 596
Score = 34.2 bits (77), Expect = 0.034
Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 18/174 (10%)
Query: 79 MKDQEEEKYPTQLSKQIKFGSKSHVE--CARFSPDGQYLITGSVDGFIEVWNFTTGKIRK 136
++D E L+K I + + + P + G ++ F
Sbjct: 369 VRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAG 428
Query: 137 DLKYQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCL-RKLEKAHSLG 195
A N + + G++K + TG K+E+ G
Sbjct: 429 QFFVGATLNMYPGPKG-----------DRQNYEGLGQIKAYNAITGDYKWEKMERFAVWG 477
Query: 196 VTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFR-GHSSFVNDITFTADGH 248
T + + + D Y++ +G +L +F+ + +T+T G
Sbjct: 478 GT---MATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGT 528
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 33.8 bits (76), Expect = 0.051
Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 12/133 (9%)
Query: 229 KEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECT-----STFKSLGASDIAV 283
++F+ H + + +D + GTV++WN++T T +SL A +
Sbjct: 13 EDFKIHDP---EAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI 68
Query: 284 N---SIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWI 340
+ L N E + T V+ + +SL + P+G+ +
Sbjct: 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQL 128
Query: 341 YCVGEDMVLVVRL 353
+ E+ +
Sbjct: 129 IFIFENNIYYCAH 141
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain
{Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Length = 571
Score = 33.0 bits (74), Expect = 0.096
Identities = 23/144 (15%), Positives = 46/144 (31%), Gaps = 18/144 (12%)
Query: 106 ARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEML 165
+ P+ + L G ++ F A
Sbjct: 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNG------------- 437
Query: 166 ASGSQSGKVKIWKIATGQCL-RKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKS 224
+ + G+++ + + TG+ K EK + G T + A+ D Y++ K
Sbjct: 438 PTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGT---LYTKGGLVWYATLDGYLKALDNKD 494
Query: 225 GKMLKEFR-GHSSFVNDITFTADG 247
GK L F+ + +T++ G
Sbjct: 495 GKELWNFKMPSGGIGSPMTYSFKG 518
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase,
N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Length = 573
Score = 31.1 bits (69), Expect = 0.35
Identities = 15/146 (10%), Positives = 39/146 (26%), Gaps = 14/146 (9%)
Query: 106 ARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEML 165
F+P + + + + + + + + + Q +
Sbjct: 398 MSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW-------NTAKFFNAEP 450
Query: 166 ASGSQSGKVKIWKIATGQCLRKLEKAHSL--GVTCIQFSRDNSQILTASFDTYVRIHGLK 223
G++ W + +E G + + + + D + +
Sbjct: 451 PKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTL----TTAGNVVFQGTADGRLVAYHAA 506
Query: 224 SGKMLKEFR-GHSSFVNDITFTADGH 248
+G+ L E G T+ DG
Sbjct: 507 TGEKLWEAPTGTGVVAAPSTYMVDGR 532
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 582
Score = 30.7 bits (68), Expect = 0.47
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 168 GSQSGKVKIWKIATGQCLRKLEKAHSL--GVTCIQFSRDNSQILTASFDTYVRIHGLKSG 225
G ++ +G+ + + ++ L GV + + + T + D Y + KSG
Sbjct: 462 DDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVL----ATAGNLVFTGTGDGYFKAFDAKSG 517
Query: 226 KMLKEFR-GHSSFVNDITFTADGHS--VLSASSDGTVKMW 262
K L +F+ G IT+ DG ++ G V +W
Sbjct: 518 KELWKFQTGSGIVSPPITWEQDGEQYLGVTVGYGGAVPLW 557
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 30.1 bits (66), Expect = 0.73
Identities = 21/187 (11%), Positives = 55/187 (29%), Gaps = 24/187 (12%)
Query: 107 RFSPDGQYLITG---------SVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLA 157
SPDGQ+++ S ++++ ++ + + ++ LA
Sbjct: 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLA 127
Query: 158 YSRDSEMLASGSQSGKVKIWKIAT-------GQCLRKLEKAHSLGVTCIQFSRDNSQILT 210
Y ++++ + G E+ + + +S + + +
Sbjct: 128 YVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAY 187
Query: 211 ASFD-TYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTEC 269
A F+ T V + + F S T + + + N +
Sbjct: 188 AQFNDTEVPL-------IEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS 240
Query: 270 TSTFKSL 276
+ S+
Sbjct: 241 VTNATSI 247
Score = 28.2 bits (61), Expect = 2.3
Identities = 6/37 (16%), Positives = 13/37 (35%), Gaps = 3/37 (8%)
Query: 106 ARFSPDGQYLI---TGSVDGFIEVWNFTTGKIRKDLK 139
FS + +Y +G + + K + L+
Sbjct: 421 VSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457
Score = 27.4 bits (59), Expect = 5.0
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 173 KVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQ-ILTASFDT--YVRIHGLKSGKMLK 229
K+++ CL + FS++ L S +H + K L+
Sbjct: 395 KIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLR 454
Query: 230 E 230
Sbjct: 455 V 455
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 29.7 bits (65), Expect = 0.76
Identities = 19/189 (10%), Positives = 55/189 (29%), Gaps = 13/189 (6%)
Query: 88 PTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDG------FIEVWNFTTGKIRKDLKYQ 141
++ + + ARF PDG+ + + G + +N G+I++ + Y
Sbjct: 33 TRKIV-----SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR-ITYF 86
Query: 142 AQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQC-LRKLEKAHSLGVTCIQ 200
+ + ++ + ++++ + + + + + T I
Sbjct: 87 SGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHIL 146
Query: 201 FSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVK 260
F+ I +F+ + +S I + S
Sbjct: 147 FADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYF 206
Query: 261 MWNLKTTEC 269
+ ++
Sbjct: 207 ITDIDGFGQ 215
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId:
9606]}
Length = 61
Score = 26.8 bits (59), Expect = 1.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 323 REGGDFLCCTTSPRGEWIYCVGEDM 347
++GG+ LCC T P I+C+ +
Sbjct: 16 KDGGELLCCDTCPSSYHIHCLNPPL 40
>d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH
alpha) N-terminal domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 76
Score = 27.0 bits (60), Expect = 1.1
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 354 IQQYLKESNLMKTLQCLQEETGVSLNTVDSVDGFIADINNGHWDTVLKSVQSLKLPEKKL 413
I YL+ + + ++E + +N + +D A + W +V++ +KK+
Sbjct: 14 IADYLRSNGYEEAYSVFKKEAELDMN--EELDKKYAGLLEKKWTSVIRL-------QKKV 64
Query: 414 IDLYEQV 420
++L ++
Sbjct: 65 MELESKL 71
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 28.3 bits (61), Expect = 1.7
Identities = 24/230 (10%), Positives = 62/230 (26%), Gaps = 11/230 (4%)
Query: 99 SKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAY 158
S + +SPDG L ++ + + + + L A + A+
Sbjct: 37 SPQPLMSPAWSPDGSKLA------YVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF 90
Query: 159 SRDSEMLASGS-QSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYV 217
S D LA ++G + ++ + + T + D+ + S
Sbjct: 91 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 150
Query: 218 RIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLG 277
+ R + ++ + + +
Sbjct: 151 PQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 210
Query: 278 ASDIAVNSIHLLPKNTEHFVVC---NKTNTVVIMNMQGQIVRSLSSGKRE 324
+S + L P N + + + +++ G+ L + +
Sbjct: 211 SSTFLDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQ 259
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase,
N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Length = 560
Score = 28.0 bits (61), Expect = 2.8
Identities = 17/111 (15%), Positives = 36/111 (32%), Gaps = 5/111 (4%)
Query: 140 YQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCL-RKLEKAHSLGVTC 198
Y+ + + +A + A D+ + + SG + W + + H G T
Sbjct: 406 YRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGT- 464
Query: 199 IQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFR-GHSSFVNDITFTADGH 248
S + + + + + G+ L +F +TF G
Sbjct: 465 --LSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR 513
>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase
{Acinetobacter calcoaceticus [TaxId: 471]}
Length = 450
Score = 27.7 bits (60), Expect = 4.0
Identities = 11/54 (20%), Positives = 21/54 (38%)
Query: 108 FSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRD 161
+ PD Q +T G I N +G ++ + N + ++ A+ D
Sbjct: 34 WGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87
>d1w36c3 c.52.1.25 (C:818-1121) Exodeoxyribonuclease V beta chain
(RecC), C-terminal domain {Escherichia coli [TaxId:
562]}
Length = 304
Score = 26.5 bits (58), Expect = 6.6
Identities = 10/70 (14%), Positives = 23/70 (32%), Gaps = 7/70 (10%)
Query: 53 QALKWQQHQGLLPPGTTIDLFRGKAAMKDQEEEKYPTQLSKQIKFGSKSHVECARFSPDG 112
+ + + G LP G ++F + + ++ + I + +G
Sbjct: 79 RLFRRFRAAGDLPYGAFGEIFW------ETQCQEMQQLADRVIACRQPGQSMEIDLACNG 132
Query: 113 QYLITGSVDG 122
ITG +
Sbjct: 133 -VQITGWLPQ 141
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.133 0.387
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,755,453
Number of extensions: 79565
Number of successful extensions: 598
Number of sequences better than 10.0: 1
Number of HSP's gapped: 423
Number of HSP's successfully gapped: 163
Length of query: 482
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 393
Effective length of database: 1,185,626
Effective search space: 465951018
Effective search space used: 465951018
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)