Query psy8451
Match_columns 110
No_of_seqs 142 out of 861
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 19:13:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8451.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8451hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g4m_A Beta-arrestin1; sensory 99.9 1.1E-26 3.7E-31 172.1 8.1 103 3-110 106-218 (393)
2 1suj_A CONE arrestin; sensory 99.9 6.1E-25 2.1E-29 162.1 11.0 102 4-110 104-215 (392)
3 3ugu_A S-arrestin; arrestin fo 99.9 4.1E-22 1.4E-26 145.6 11.0 102 5-110 121-234 (380)
4 2r51_A Vacuolar protein sortin 99.9 5.7E-21 2E-25 139.0 13.6 95 2-109 102-196 (340)
5 2fau_A Vacuolar protein sortin 99.8 8.8E-19 3E-23 127.5 14.5 95 2-109 102-196 (341)
6 2r51_A Vacuolar protein sortin 94.6 0.18 6.3E-06 36.5 7.8 52 9-60 247-301 (340)
7 2fau_A Vacuolar protein sortin 93.2 0.51 1.8E-05 34.2 8.0 52 9-60 247-301 (341)
8 2pn5_A TEP1R, thioester-contai 71.7 5.9 0.0002 33.3 5.1 28 83-110 94-121 (1325)
9 2hr0_A Complement C3 beta chai 70.7 5.1 0.00018 30.8 4.3 24 87-110 104-127 (645)
10 4fxk_A Complement C4 beta chai 68.1 3.6 0.00012 31.4 3.0 21 90-110 121-141 (656)
11 2kps_A Uncharacterized protein 67.2 1.7 5.9E-05 25.6 0.8 32 3-38 55-87 (98)
12 3hrz_A Cobra venom factor; ser 63.9 5.1 0.00017 31.1 3.1 23 88-110 103-125 (627)
13 2ag4_A GM2-AP, ganglioside GM2 61.9 28 0.00095 22.1 6.4 35 3-41 111-147 (164)
14 2zou_A Spondin-1; beta-sandwic 61.2 5.8 0.0002 25.0 2.5 21 90-110 23-45 (149)
15 4acq_A Alpha-2-macroglobulin; 61.0 9.8 0.00033 32.5 4.5 27 84-110 99-125 (1451)
16 1nep_A EPV20, BNPC2, epididyma 59.3 25 0.00086 21.3 5.2 10 30-39 87-96 (130)
17 2cu9_A Spcia1, histone chapero 57.7 17 0.00058 23.5 4.2 40 3-42 65-121 (161)
18 3cu7_A Complement C5; Mg domai 55.3 8.8 0.0003 33.1 3.3 27 84-110 119-145 (1676)
19 3coo_A Spondin-1; reelin-N dom 55.1 9.3 0.00032 25.0 2.8 20 91-110 39-60 (180)
20 1xwv_A DER F II; beta sheets, 54.2 18 0.0006 22.0 3.8 14 8-21 86-99 (129)
21 3prx_B Cobra venom factor; imm 53.3 13 0.00043 32.4 3.9 27 84-110 121-147 (1642)
22 2kq1_A BH0266 protein; solutio 51.5 12 0.0004 22.5 2.6 18 3-20 64-82 (119)
23 1g4m_A Beta-arrestin1; sensory 49.8 48 0.0016 24.2 6.1 28 31-58 319-354 (393)
24 2b39_A C3; thioester, immune d 48.8 20 0.00069 31.0 4.5 23 88-110 126-148 (1661)
25 3kpa_A Probable ubiquitin fold 48.0 16 0.00055 23.6 2.9 17 7-23 84-100 (168)
26 1z0n_A 5'-AMP-activated protei 45.9 13 0.00044 21.5 2.1 13 2-14 50-62 (96)
27 2l3u_A YBBR family protein; be 44.4 5.4 0.00018 23.2 0.3 17 3-19 55-71 (98)
28 2io5_A ASF1A protein; chaperon 43.5 29 0.00099 22.7 3.7 39 3-41 68-122 (175)
29 3lyw_A YBBR family protein; st 38.2 18 0.00062 20.9 1.9 17 3-19 52-68 (90)
30 3nme_A Ptpkis1 protein, SEX4 g 38.0 14 0.00048 25.7 1.6 14 2-15 213-226 (294)
31 2qlv_B Protein SIP2, protein S 36.8 15 0.00052 25.3 1.6 29 2-31 47-79 (252)
32 2i32_A Anti-silencing factor 1 35.5 46 0.0016 21.9 3.7 39 3-41 90-144 (182)
33 2cio_B Inhibitor of cysteine p 34.6 75 0.0026 19.0 5.8 14 33-46 93-106 (121)
34 1roc_A Anti-silencing protein 34.1 67 0.0023 20.5 4.2 39 3-41 66-120 (155)
35 2idc_A Anti-silencing protein 34.0 63 0.0022 21.1 4.2 40 3-42 67-122 (179)
36 2h7w_A Chagasin; beta-strands, 33.7 83 0.0028 19.3 5.5 15 32-46 103-117 (131)
37 2z6o_A UFM1-conjugating enzyme 33.6 36 0.0012 22.2 2.9 17 7-23 82-98 (172)
38 2wgn_B Inhibitor of cysteine p 33.1 84 0.0029 19.2 4.5 15 32-46 104-118 (132)
39 2k75_A Uncharacterized protein 30.4 40 0.0014 19.7 2.6 23 85-109 47-69 (106)
40 3fo8_D Tail sheath protein GP1 29.7 58 0.002 22.7 3.5 24 86-109 14-37 (283)
41 2lv4_A Putative outer membrane 28.2 33 0.0011 21.4 1.9 18 92-109 52-69 (146)
42 2c34_A ICP, inhibitor of cyste 27.7 71 0.0024 19.0 3.4 13 33-45 89-101 (116)
43 3m86_A Amoebiasin-2; cysteine 26.9 1E+02 0.0035 18.1 5.7 14 33-46 84-97 (111)
44 2hue_A Anti-silencing protein 26.3 74 0.0025 20.8 3.4 40 3-42 71-126 (175)
45 2l9s_A PHD finger protein 12; 25.7 10 0.00035 19.2 -0.6 14 11-24 26-39 (45)
46 4aee_A Alpha amylase, catalyti 25.5 29 0.00098 27.1 1.6 14 1-14 60-73 (696)
47 1gvp_A Gene V protein; DNA-bin 24.4 46 0.0016 19.2 2.0 14 6-19 39-52 (87)
48 4aef_A Neopullulanase (alpha-a 23.9 39 0.0013 26.0 2.1 14 1-14 57-70 (645)
49 2p9r_A Alpha-2-M, alpha-2-macr 21.5 1.2E+02 0.004 17.0 5.6 36 10-57 63-98 (102)
50 2kbn_A Conserved protein; nucl 21.4 1.1E+02 0.0036 17.8 3.3 26 84-109 43-70 (109)
51 2hr0_A Complement C3 beta chai 20.9 56 0.0019 25.0 2.4 23 88-110 431-453 (645)
52 1yyc_A LEA protein, putative l 20.9 1.8E+02 0.006 18.7 4.7 35 6-40 109-146 (174)
No 1
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=99.93 E-value=1.1e-26 Score=172.12 Aligned_cols=103 Identities=22% Similarity=0.368 Sum_probs=77.3
Q ss_pred ecCeeeEEEeEEECCCCCCCcee--------cCCeEEEEEEEEEEeCCCC-CCceEEEEEEEEccccCCCCCCCC-Ccee
Q psy8451 3 IPQGSHVYPFSYTLPPTIPSSFD--------GEHGRVRYKVTARLDRPWK-FDKTTEAVFSVVTPYDLNTDMRAK-EPIN 72 (110)
Q Consensus 3 l~~G~h~fpF~f~LP~~lPsSf~--------~~~g~I~Y~i~a~i~~~~~-~~~~~~~~~~V~~~~~~~~~p~~~-~p~~ 72 (110)
+++|.|+|||+|+||.+||+||+ |++|+|+|.|+|.+++++. ...+....+.+.+.++.+ |..+ .|..
T Consensus 106 ~~~G~h~fPF~f~LP~~lPsSfelq~~~~d~G~~g~IrY~Vka~i~~~~~~k~~K~~~v~l~i~~l~~~--p~~~~~~~~ 183 (393)
T 1g4m_A 106 KKLGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYA--PERPGPQPT 183 (393)
T ss_dssp HHSCTTEEEEEECCCTTSCCCEEEECCGGGGGGCEEEEEEEEEEEESSTTSCCCGGGEEEEEEEEEECC--CCCCSSCCC
T ss_pred ccCCceEEEEEeeCCCCCCceEEEccccccCCCcEEEEEEEEEEEcCCcccccceEEEEEEeccccccC--chhhcCCCc
Confidence 35999999999999999999999 8899999999999998831 112222233444555543 4332 3334
Q ss_pred EEEeeeEEEEEccCccEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 73 QNVSKNFRFLWRQSGPLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 73 ~~~~~~~~~~~~~~g~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
.+.++.+ ||++|++++++++||++|+|||+|+++|
T Consensus 184 ~e~~k~f---c~~sG~l~l~~sldk~~Y~pGE~I~v~v 218 (393)
T 1g4m_A 184 AETTRQF---LMSDKPLHLEASLDKEIYYHGEPISVNV 218 (393)
T ss_dssp CEEEEEC---BSSSSCEEEEEEESCSEEETTCCEEEEE
T ss_pred eEEEEEE---EEcCCCEEEEEEECCceEcCCCEEEEEE
Confidence 4555543 6899999999999999999999999875
No 2
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=99.92 E-value=6.1e-25 Score=162.14 Aligned_cols=102 Identities=20% Similarity=0.322 Sum_probs=75.5
Q ss_pred cCeeeEEEeEEECCCCCCCce--------ecCCeEEEEEEEEEEeCCCC-CCceEEEEEEEEccccCCCCCCCCCce-eE
Q psy8451 4 PQGSHVYPFSYTLPPTIPSSF--------DGEHGRVRYKVTARLDRPWK-FDKTTEAVFSVVTPYDLNTDMRAKEPI-NQ 73 (110)
Q Consensus 4 ~~G~h~fpF~f~LP~~lPsSf--------~~~~g~I~Y~i~a~i~~~~~-~~~~~~~~~~V~~~~~~~~~p~~~~p~-~~ 73 (110)
++|.|.|||+|+||.+||+|| +|++|+|+|.|+|.++++|. ...+......+++.++. .|....|. ..
T Consensus 104 ~~G~h~fPFsFqLP~~lPsSf~lqp~~~~eGk~g~VrY~VKa~i~~~~~dk~~Kr~tv~l~ir~l~~--~P~~~~~~p~~ 181 (392)
T 1suj_A 104 KLGAHAYPFCFKMGTNLPCSVTLQPGPDDTGKSCGVDFEVKAFCAENLEEKIHKRNSVQLVIRKVQF--APANLGVAPKT 181 (392)
T ss_dssp HHCSSEEEEEECCCSSCCCCEEECCCTTCCSCCEEEEEEEEEEEESCTTSCCCGGGEEEEEEEEEEC--CCSSCCCCCCC
T ss_pred cccCeeEeEEeeCCCCCCCeEEeccCCccCCCceeEEEEEEEEEcCChhhccceEEEEEEeeecccc--CccccCCCCee
Confidence 689999999999999999999 58899999999999999863 11221222222333332 34333222 23
Q ss_pred EEeeeEEEEEccCccEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 74 NVSKNFRFLWRQSGPLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 74 ~~~~~~~~~~~~~g~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
+.++.+ ||++|++++++++||++|+|||+|+|+|
T Consensus 182 e~~k~f---~~ssGpl~l~vsLdK~~Y~pGE~I~V~v 215 (392)
T 1suj_A 182 EITRQF---MLSDRPLHLEASLDKEIYYHGEPINVNV 215 (392)
T ss_dssp EEEEEE---EETTEEEEEEEEESCSEEETTCCEEEEE
T ss_pred EEEEEe---EecCCCEEEEEEeCCccccCCCEEEEEE
Confidence 444543 6899999999999999999999999975
No 3
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=99.87 E-value=4.1e-22 Score=145.60 Aligned_cols=102 Identities=22% Similarity=0.311 Sum_probs=78.5
Q ss_pred CeeeEEEeEEECCCCCCCcee--------cCCeEEEEEEEEEEeCCCC----CCceEEEEEEEEccccCCCCCCCCCcee
Q psy8451 5 QGSHVYPFSYTLPPTIPSSFD--------GEHGRVRYKVTARLDRPWK----FDKTTEAVFSVVTPYDLNTDMRAKEPIN 72 (110)
Q Consensus 5 ~G~h~fpF~f~LP~~lPsSf~--------~~~g~I~Y~i~a~i~~~~~----~~~~~~~~~~V~~~~~~~~~p~~~~p~~ 72 (110)
.|.|.|||.|+||.+||+||. |+.|.|+|.|+|.++++|. ...+......+++.++.+. +....+..
T Consensus 121 lG~nayPF~f~LP~~lPsSv~LQp~p~d~Gk~cgV~YeVKafia~~~~~~~dk~~Kr~sV~L~Irklq~aP-~~~~~~P~ 199 (380)
T 3ugu_A 121 LGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAP-RDMGPQPR 199 (380)
T ss_dssp HCTTEEEEEECCCSSCCCSEEECCCTTCCSCCEEEEEEEEEEEEBCCSSSSSBCCGGGEEEEEEEEEEBCC-SCCCCCCE
T ss_pred hCcCceeEEEeCCCCCCCEEEeccCCccCCCccceEEEEEEEEccCcccccccccccceEEEeeeecccCC-cccCCCCc
Confidence 399999999999999999996 6778999999999998762 2233334444555555542 22222335
Q ss_pred EEEeeeEEEEEccCccEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 73 QNVSKNFRFLWRQSGPLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 73 ~~~~~~~~~~~~~~g~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
.+.+|.| ++++|+++++++|||.+|+|||+|+++|
T Consensus 200 ~e~~K~F---~~ssGpl~L~vsLdK~~Y~pGE~I~V~v 234 (380)
T 3ugu_A 200 AEASWQF---FMSDKPLRLAVSLSKEIYYHGEPIPVTV 234 (380)
T ss_dssp EEEEEEC---TTCCCEEEEEEEESCSEEETTCCEEEEE
T ss_pred ceEEEEe---EecCCCEEEEEEeCCccCcCCCEEEEEE
Confidence 6777877 5799999999999999999999999975
No 4
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=99.86 E-value=5.7e-21 Score=138.98 Aligned_cols=95 Identities=22% Similarity=0.214 Sum_probs=81.9
Q ss_pred eecCeeeEEEeEEECCCCCCCceecCCeEEEEEEEEEEeCCCCCCceEEEEEEEEccccCCCCCCCCCceeEEEeeeEEE
Q psy8451 2 EIPQGSHVYPFSYTLPPTIPSSFDGEHGRVRYKVTARLDRPWKFDKTTEAVFSVVTPYDLNTDMRAKEPINQNVSKNFRF 81 (110)
Q Consensus 2 ~l~~G~h~fpF~f~LP~~lPsSf~~~~g~I~Y~i~a~i~~~~~~~~~~~~~~~V~~~~~~~~~p~~~~p~~~~~~~~~~~ 81 (110)
.|++|.| |||+|+||..+|+||+|.+|+|||.|+|.++|||. +...+++|.|... +..|+...|...+. ++
T Consensus 102 ~L~~G~~-fpF~F~lp~~l~eSy~G~~g~IrY~vkv~i~Rp~~-di~~~~eF~V~~~---~~~p~~~~pIk~Ev----gi 172 (340)
T 2r51_A 102 EITQSQA-FDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLN-DVVKEMDIVVHTL---STYPELNSSIKMEV----GI 172 (340)
T ss_dssp EECSCEE-EEEEECSBCCCSCCEECSSEEEEEEEEEEECCSSC-CEEEEEEEEEECC---CCCCCCCCCEEEEE----EE
T ss_pred ccCCCcE-EeeEeCCCCCCCcCeEeeeEEEEEEEEEEEEecCC-CceEEEEEEEEeC---CCCCccCCCEeccc----cC
Confidence 4899999 99999999999999999999999999999999998 9999999999874 33466677777764 33
Q ss_pred EEccCccEEEEEEeCCeeeeCCCeEEEE
Q psy8451 82 LWRQSGPLTLSVSAPFSGFVPGQTIPCM 109 (110)
Q Consensus 82 ~~~~~g~v~~~~~l~k~~y~pGe~i~i~ 109 (110)
.+| +++++.+++++|.+||.|.-+
T Consensus 173 ~~c----l~Ie~~~~ks~y~lgd~I~G~ 196 (340)
T 2r51_A 173 EDC----LHIEFEYNKSKYHLKDVIVGK 196 (340)
T ss_dssp TTT----EEEEEEESCSEEETTCEEEEE
T ss_pred Cce----EEEEEEECcccccCCCeEEEE
Confidence 222 899999999999999998743
No 5
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=99.81 E-value=8.8e-19 Score=127.49 Aligned_cols=95 Identities=20% Similarity=0.198 Sum_probs=81.2
Q ss_pred eecCeeeEEEeEEECCCCCCCceecCCeEEEEEEEEEEeCCCCCCceEEEEEEEEccccCCCCCCCCCceeEEEeeeEEE
Q psy8451 2 EIPQGSHVYPFSYTLPPTIPSSFDGEHGRVRYKVTARLDRPWKFDKTTEAVFSVVTPYDLNTDMRAKEPINQNVSKNFRF 81 (110)
Q Consensus 2 ~l~~G~h~fpF~f~LP~~lPsSf~~~~g~I~Y~i~a~i~~~~~~~~~~~~~~~V~~~~~~~~~p~~~~p~~~~~~~~~~~ 81 (110)
.|++| |+|||+|++|..+|+||+|.+|+|||.|+|+++|||. +...+++|.|... +..|+...|...+..
T Consensus 102 ~L~~g-~~fpF~F~~~~~~~eSy~G~~~~IrY~vrv~i~R~~~-di~~~~eF~V~~~---~~~p~~~~pi~~evg----- 171 (341)
T 2fau_A 102 ELTQS-RSYDFEFMQVEKPYESYIGANVRLRYFLKVTIVRRLT-DLVKEYDLIVHQL---ATYPDVNNSIKMEVG----- 171 (341)
T ss_dssp EECSC-EEEEEEECSCCCCSCCEECSSEEEEEEEEEEECCSSS-CEEEEEEEEECCC---BCCCCCCCCEEEEEE-----
T ss_pred ccCCC-cEEeeEeCCCCCCCcceEeeEEEEEEEEEEEEEecCc-ceeEEEEEEEEeC---CCCCCCCCCeEEEEe-----
Confidence 47899 9999999999889999999999999999999999998 9999999999873 333666677666532
Q ss_pred EEccCccEEEEEEeCCeeeeCCCeEEEE
Q psy8451 82 LWRQSGPLTLSVSAPFSGFVPGQTIPCM 109 (110)
Q Consensus 82 ~~~~~g~v~~~~~l~k~~y~pGe~i~i~ 109 (110)
.++.+++++.+++++|.+||.|..+
T Consensus 172 ---ied~L~ieF~~~ks~y~l~d~I~G~ 196 (341)
T 2fau_A 172 ---IEDXLHIEFEYNKSKYHLKDVIVGK 196 (341)
T ss_dssp ---ETTTEEEEEEESCSEEETTCEEEEE
T ss_pred ---ccccEEEEEEEccccccCCCeEEEE
Confidence 2566789999999999999999844
No 6
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A
Probab=94.60 E-value=0.18 Score=36.53 Aligned_cols=52 Identities=13% Similarity=0.052 Sum_probs=43.7
Q ss_pred EEEeEEECC-CCCCCcee--cCCeEEEEEEEEEEeCCCCCCceEEEEEEEEcccc
Q psy8451 9 VYPFSYTLP-PTIPSSFD--GEHGRVRYKVTARLDRPWKFDKTTEAVFSVVTPYD 60 (110)
Q Consensus 9 ~fpF~f~LP-~~lPsSf~--~~~g~I~Y~i~a~i~~~~~~~~~~~~~~~V~~~~~ 60 (110)
+.||.+.|| -++++|+. ...=+|+|.|.+.+............+|++.+.-|
T Consensus 247 ~IPirl~Lp~~~l~PT~~~~~~~fsV~Y~Lnlvl~~e~~~~~~kq~pI~L~R~~~ 301 (340)
T 2r51_A 247 SIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVLIDEEERRYFKQQEVVLWRKGD 301 (340)
T ss_dssp EEEEEEEGGGSCCCCCEEEETTTEEEEEEEEEEEEETTCCEEEEEEEEEEECCC-
T ss_pred EEEEEEECCCCCCCCCccccCCeEEEEEEEEEEEEeCCCcEEEEEeeEEEEECCC
Confidence 689999999 68999998 67789999999999876656777888999988765
No 7
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens}
Probab=93.24 E-value=0.51 Score=34.21 Aligned_cols=52 Identities=12% Similarity=-0.010 Sum_probs=39.7
Q ss_pred EEEeEEECC-CCCCCcee--cCCeEEEEEEEEEEeCCCCCCceEEEEEEEEcccc
Q psy8451 9 VYPFSYTLP-PTIPSSFD--GEHGRVRYKVTARLDRPWKFDKTTEAVFSVVTPYD 60 (110)
Q Consensus 9 ~fpF~f~LP-~~lPsSf~--~~~g~I~Y~i~a~i~~~~~~~~~~~~~~~V~~~~~ 60 (110)
+.||.+.|| -.+++|+. ...=+|+|.|.+.+..-........+++++.+.-+
T Consensus 247 ~IPirl~Lp~~~l~PT~~~~~~~fsV~Y~Lnlvlvde~~rryfk~~EI~L~R~~~ 301 (341)
T 2fau_A 247 SIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNLVLVDEEDRRYFKQQEIILWRKAP 301 (341)
T ss_dssp CEEEEEESTTTCCCCCEEEEETTEEEEEEEEEEEEETTCCEEEEEEEEEEECBCC
T ss_pred EEEEEEEcCCCCCCCcchhcCCeEEEEEEEEEEEEeCCCCeeeeeeEEEEEECCC
Confidence 789999999 58999999 67889999999999544332344456688877543
No 8
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=71.69 E-value=5.9 Score=33.26 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=23.6
Q ss_pred EccCccEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 83 WRQSGPLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 83 ~~~~g~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
....-...+-+..||..|.|||+|.+++
T Consensus 94 ~~~~~~~~~fi~TDr~iYrPGqtV~~r~ 121 (1325)
T 2pn5_A 94 VYLSKSISGLIQVDKPVFKPGDTVNFRV 121 (1325)
T ss_dssp EECSCSEEEEEEESCSEECTTCEEEEEE
T ss_pred EEEcccccEEEecCCCccCCCCEEEEEE
Confidence 3566677889999999999999998763
No 9
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=70.73 E-value=5.1 Score=30.84 Aligned_cols=24 Identities=21% Similarity=0.221 Sum_probs=20.1
Q ss_pred ccEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 87 GPLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 87 g~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
....+-+..||..|.|||+|.+++
T Consensus 104 ~~~~~fi~TDR~iYrPGqtV~~r~ 127 (645)
T 2hr0_A 104 QSGYLFIQTDKTIYTPGSTVLYRI 127 (645)
T ss_dssp CCCEEEEEESCSBCCTTSEEEEEE
T ss_pred CCccEEEEcCCccCCCCCEEEEEE
Confidence 344678999999999999998864
No 10
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=68.07 E-value=3.6 Score=31.43 Aligned_cols=21 Identities=19% Similarity=0.300 Sum_probs=18.2
Q ss_pred EEEEEeCCeeeeCCCeEEEEC
Q psy8451 90 TLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 90 ~~~~~l~k~~y~pGe~i~i~v 110 (110)
.+-++.||..|.|||+|.+++
T Consensus 121 ~vFIqTDr~iYrPGqtV~~r~ 141 (656)
T 4fxk_A 121 HLFLQTDQPIYNPGQRVRYRV 141 (656)
T ss_dssp EEEEEESCSEECTTCEEEEEE
T ss_pred cEEEECCCCCcCCCCEEEEEE
Confidence 467889999999999999864
No 11
>2kps_A Uncharacterized protein; beta strand, figure eight, figure 8, structural genomics, PSI-2, protein structure initiative; NMR {Desulfitobacterium hafniense Y51} PDB: 2l3u_A
Probab=67.25 E-value=1.7 Score=25.57 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=22.8
Q ss_pred ecCeeeEEEeEEECCCCCCCceec-CCeEEEEEEEEE
Q psy8451 3 IPQGSHVYPFSYTLPPTIPSSFDG-EHGRVRYKVTAR 38 (110)
Q Consensus 3 l~~G~h~fpF~f~LP~~lPsSf~~-~~g~I~Y~i~a~ 38 (110)
|.+|+|+.|.++.+|.++ +- ....|.|.|++.
T Consensus 55 l~~G~~~vpv~v~lP~gv----~vv~~~~v~vtl~~~ 87 (98)
T 2kps_A 55 KAVGEHTVKIYWQLPAGI----EMVSIPDVTYTLKAK 87 (98)
T ss_dssp CCSSCEEEECCCBCSSCC----CCCCCCEEEECEEEC
T ss_pred CCCCeEEEeEEEECCCCE----EEEecCcEEEEEEEC
Confidence 578999999998877554 32 356777777764
No 12
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=63.87 E-value=5.1 Score=31.10 Aligned_cols=23 Identities=13% Similarity=0.210 Sum_probs=19.2
Q ss_pred cEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 88 PLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 88 ~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
.-.+-+..||..|.|||+|.+++
T Consensus 103 ~~~~fi~TDr~iYrPGqtV~~r~ 125 (627)
T 3hrz_A 103 SSFLFIQTDKGIYTPGSPVLYRV 125 (627)
T ss_dssp CSCEEEEESCSEECTTCEECEEE
T ss_pred CCcEEEECCCCccCCCCEEEEEE
Confidence 44567899999999999998764
No 13
>2ag4_A GM2-AP, ganglioside GM2 activator; complex of single chain lipid and fatty acids, lipid binding; HET: LP3 OLA; 1.80A {Homo sapiens} SCOP: b.95.1.1 PDB: 1tjj_A* 2af9_A* 2ag2_A* 1pu5_A* 2ag9_A* 1g13_A* 1pub_A* 2agc_A*
Probab=61.92 E-value=28 Score=22.15 Aligned_cols=35 Identities=26% Similarity=0.591 Sum_probs=23.7
Q ss_pred ecCeeeEEEeE-EECCC-CCCCceecCCeEEEEEEEEEEeC
Q psy8451 3 IPQGSHVYPFS-YTLPP-TIPSSFDGEHGRVRYKVTARLDR 41 (110)
Q Consensus 3 l~~G~h~fpF~-f~LP~-~lPsSf~~~~g~I~Y~i~a~i~~ 41 (110)
+++|.|..+-+ |.||. .+|+-.. .| .|.+++.+..
T Consensus 111 i~~G~Y~l~~~~~~lp~~~lP~~l~--~G--~Y~v~~~~~~ 147 (164)
T 2ag4_A 111 FKEGTYSLPKSEFVVPDLELPSWLT--TG--NYRIESVLSS 147 (164)
T ss_dssp BCSEEEEEEEEEEEECCCCCCTTCS--SE--EEEEEEEEEE
T ss_pred CCCcEEEEeeeEeecCcccccCccC--Cc--eEEEEEEEec
Confidence 57999999975 88886 7776432 34 4666666654
No 14
>2zou_A Spondin-1; beta-sandwich, extracellular protein, cell adhesion, extrace matrix, glycoprotein, secreted; 1.45A {Homo sapiens}
Probab=61.16 E-value=5.8 Score=25.05 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=16.2
Q ss_pred EEEEEe--CCeeeeCCCeEEEEC
Q psy8451 90 TLSVSA--PFSGFVPGQTIPCMI 110 (110)
Q Consensus 90 ~~~~~l--~k~~y~pGe~i~i~v 110 (110)
-+.+.+ +...|.||+++.|++
T Consensus 23 py~i~i~~~~~~y~pG~~~~VtL 45 (149)
T 2zou_A 23 EFSLRVEGDPDFYKPGTSYRVTL 45 (149)
T ss_dssp SEEEEETTCCSSBCTTCEEEEEE
T ss_pred CEEEEEecCCceEcCCCcEEEEE
Confidence 456666 778999999988864
No 15
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=61.03 E-value=9.8 Score=32.54 Aligned_cols=27 Identities=22% Similarity=0.228 Sum_probs=22.0
Q ss_pred ccCccEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 84 RQSGPLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 84 ~~~g~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
+..-.-.+-++.||..|.|||+|.++|
T Consensus 99 v~~~~~~~fiqTDK~iY~Pgq~V~~rv 125 (1451)
T 4acq_A 99 VKNEDSLVFVQTDKSIYKPGQTVKFRV 125 (1451)
T ss_dssp EECCCCEEEEEESCSEECTTCEEEEEE
T ss_pred EEccCccEEEECCCCcCCCCCEEEEEE
Confidence 444455688999999999999999874
No 16
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=59.27 E-value=25 Score=21.32 Aligned_cols=10 Identities=10% Similarity=0.092 Sum_probs=4.8
Q ss_pred EEEEEEEEEE
Q psy8451 30 RVRYKVTARL 39 (110)
Q Consensus 30 ~I~Y~i~a~i 39 (110)
...|.....+
T Consensus 87 ~~~y~~~lpV 96 (130)
T 1nep_A 87 TYNYVNKLPV 96 (130)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEeEe
Confidence 5555543333
No 17
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=57.67 E-value=17 Score=23.46 Aligned_cols=40 Identities=28% Similarity=0.537 Sum_probs=28.9
Q ss_pred ecCeeeEEEeEEECC--CCCCC--------------ceec-CCeEEEEEEEEEEeCC
Q psy8451 3 IPQGSHVYPFSYTLP--PTIPS--------------SFDG-EHGRVRYKVTARLDRP 42 (110)
Q Consensus 3 l~~G~h~fpF~f~LP--~~lPs--------------Sf~~-~~g~I~Y~i~a~i~~~ 42 (110)
++.|.|+|-|+-.-| ..+|. |+++ ++-+|-|.+.-....+
T Consensus 65 i~~G~~kFv~~adpPd~~~IP~~~dilGvTvillt~sY~~qEFiRVGYYVnneY~d~ 121 (161)
T 2cu9_A 65 IPIGINKFVFEADPPNIDLLPQLSDVLGVTVILLSCAYEDNEFVRVGYYVNNEMEGL 121 (161)
T ss_dssp CCSEEEEEEEEECCCCGGGSSCGGGGSEEEEEEEEEEETTEEEEEEEEEEEEEETTC
T ss_pred ccceEEEEEEEcCCCChhHCCCcccceeeEEEEEEEEECCeEEEEEEEEEeceeCCh
Confidence 578999999999999 68887 2222 3457777777776644
No 18
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=55.30 E-value=8.8 Score=33.12 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=22.1
Q ss_pred ccCccEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 84 RQSGPLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 84 ~~~g~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
+.+-...+-+..||..|.|||+|.+++
T Consensus 119 ~~~~~~~~fiqTDR~iYrPGqtV~~r~ 145 (1676)
T 3cu7_A 119 ITYDNGFLFIHTDKPVYTPDQSVKVRV 145 (1676)
T ss_dssp EECCCSEEEEEESCSEECTTCEECEEE
T ss_pred EEcCCCcEEEECCCCccCCCCEEEEEE
Confidence 455556788999999999999998763
No 19
>3coo_A Spondin-1; reelin-N domain, cell adhesion, extracellular MAT glycoprotein, secreted; 2.00A {Homo sapiens} PDB: 2zot_A
Probab=55.08 E-value=9.3 Score=25.02 Aligned_cols=20 Identities=15% Similarity=0.278 Sum_probs=15.7
Q ss_pred EEEEeC--CeeeeCCCeEEEEC
Q psy8451 91 LSVSAP--FSGFVPGQTIPCMI 110 (110)
Q Consensus 91 ~~~~l~--k~~y~pGe~i~i~v 110 (110)
+.+.++ ...|.||+++.|++
T Consensus 39 y~I~i~~~~~~y~pG~~~~VtL 60 (180)
T 3coo_A 39 FSLRVEGDPDFYKPGTSYRVTL 60 (180)
T ss_dssp EEEEETTCCSEECTTCEEEEEE
T ss_pred EEEEEcCCCceecCCCcEEEEE
Confidence 456666 89999999998864
No 20
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=54.16 E-value=18 Score=22.04 Aligned_cols=14 Identities=14% Similarity=0.437 Sum_probs=6.1
Q ss_pred eEEEeEEECCCCCC
Q psy8451 8 HVYPFSYTLPPTIP 21 (110)
Q Consensus 8 h~fpF~f~LP~~lP 21 (110)
|.|-+++.++...|
T Consensus 86 ~~y~~~~~v~~~~P 99 (129)
T 1xwv_A 86 YDAKYTWNVPKIAP 99 (129)
T ss_dssp EEEEEEEECCTTSC
T ss_pred EEEEEEeEecccCC
Confidence 44444444444444
No 21
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=53.27 E-value=13 Score=32.40 Aligned_cols=27 Identities=11% Similarity=0.119 Sum_probs=21.5
Q ss_pred ccCccEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 84 RQSGPLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 84 ~~~g~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
++.-.-.+-+..||..|.|||+|.++|
T Consensus 121 v~~~~~~~FiqTDk~iYrPGqtV~~rv 147 (1642)
T 3prx_B 121 LSYQSSFLFIQTDKGIYTPGSPVLYRV 147 (1642)
T ss_dssp EECCCCCEEEEESCSEECTTCEEEEEE
T ss_pred EEcCCCeEEEEcCCCcCCCCCEEEEEE
Confidence 344445677899999999999999864
No 22
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=51.54 E-value=12 Score=22.50 Aligned_cols=18 Identities=22% Similarity=0.390 Sum_probs=14.6
Q ss_pred ecCeeeEEEeEEE-CCCCC
Q psy8451 3 IPQGSHVYPFSYT-LPPTI 20 (110)
Q Consensus 3 l~~G~h~fpF~f~-LP~~l 20 (110)
+.+|+|+.|.+.. ||.++
T Consensus 64 l~~G~~~vpv~v~~lp~~v 82 (119)
T 2kq1_A 64 AGEGSHTVDVEHRGFPGDL 82 (119)
T ss_dssp CCBEEEEEECEEESSCTTS
T ss_pred CCCCeEEEEEEEecCCCCe
Confidence 5689999999998 66554
No 23
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=49.76 E-value=48 Score=24.20 Aligned_cols=28 Identities=32% Similarity=0.452 Sum_probs=22.3
Q ss_pred EEEEEEEEEeCCCC--------CCceEEEEEEEEcc
Q psy8451 31 VRYKVTARLDRPWK--------FDKTTEAVFSVVTP 58 (110)
Q Consensus 31 I~Y~i~a~i~~~~~--------~~~~~~~~~~V~~~ 58 (110)
|.|.|++.+..++. .+...+-+|++..+
T Consensus 319 VsY~vkV~l~v~~gg~~~~~~~~~l~~~lPi~i~~p 354 (393)
T 1g4m_A 319 VSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHP 354 (393)
T ss_dssp EEEEEEEEEEECCC--------CEEEEEEEEEEECC
T ss_pred EEEEEEEEEEecCCCcccccccccEEEEeCEEEecC
Confidence 99999999988753 37778888888764
No 24
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=48.83 E-value=20 Score=30.96 Aligned_cols=23 Identities=17% Similarity=0.232 Sum_probs=19.3
Q ss_pred cEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 88 PLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 88 ~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
.-.+-+..||..|.|||+|.+++
T Consensus 126 ~~~~fiqTDR~iYrPGqtV~~r~ 148 (1661)
T 2b39_A 126 SGYLFIQTDKTIYTPGSTVLYRV 148 (1661)
T ss_dssp CCEEEEEESCSEECTTSEEEEEE
T ss_pred CCcEEEecCCCccCCCCEEEEEE
Confidence 33478999999999999998864
No 25
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=48.04 E-value=16 Score=23.56 Aligned_cols=17 Identities=18% Similarity=0.540 Sum_probs=13.6
Q ss_pred eeEEEeEEECCCCCCCc
Q psy8451 7 SHVYPFSYTLPPTIPSS 23 (110)
Q Consensus 7 ~h~fpF~f~LP~~lPsS 23 (110)
.|.|.++|.+|.+.|.+
T Consensus 84 kyeFkLefdiP~tYP~t 100 (168)
T 3kpa_A 84 KYEFEMNFDIPVTYPQA 100 (168)
T ss_dssp EEEEEEEEECCTTTTTS
T ss_pred eeEEEEEEeCCccCCCC
Confidence 58899999999877753
No 26
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=45.93 E-value=13 Score=21.50 Aligned_cols=13 Identities=38% Similarity=0.933 Sum_probs=7.5
Q ss_pred eecCeeeEEEeEE
Q psy8451 2 EIPQGSHVYPFSY 14 (110)
Q Consensus 2 ~l~~G~h~fpF~f 14 (110)
.|++|.|.|.|..
T Consensus 50 ~l~~G~~~YKf~V 62 (96)
T 1z0n_A 50 DLPEGEHQYKFFV 62 (96)
T ss_dssp EECSEEEEEEEEE
T ss_pred EccCCCEEEEEEE
Confidence 3566666665554
No 27
>2l3u_A YBBR family protein; beta strand, figure eight, figure 8, structural genomics, PS biology, protein structure initiative; NMR {Desulfitobacterium hafniense}
Probab=44.39 E-value=5.4 Score=23.21 Aligned_cols=17 Identities=24% Similarity=0.428 Sum_probs=12.7
Q ss_pred ecCeeeEEEeEEECCCC
Q psy8451 3 IPQGSHVYPFSYTLPPT 19 (110)
Q Consensus 3 l~~G~h~fpF~f~LP~~ 19 (110)
+.+|+|..|-++.+|.+
T Consensus 55 l~~G~~~v~v~v~~P~~ 71 (98)
T 2l3u_A 55 KAVGEHTVKIYWQLPAG 71 (98)
T ss_dssp CCSBCCEECCCCBCSSS
T ss_pred CcCceEEEeEEEECCCC
Confidence 56899998887766543
No 28
>2io5_A ASF1A protein; chaperone, chaperone-structural protein complex; 2.70A {Homo sapiens} SCOP: b.1.22.1
Probab=43.53 E-value=29 Score=22.69 Aligned_cols=39 Identities=33% Similarity=0.663 Sum_probs=29.6
Q ss_pred ecCeeeEEEeEEECC--CCCCC-------------ceec-CCeEEEEEEEEEEeC
Q psy8451 3 IPQGSHVYPFSYTLP--PTIPS-------------SFDG-EHGRVRYKVTARLDR 41 (110)
Q Consensus 3 l~~G~h~fpF~f~LP--~~lPs-------------Sf~~-~~g~I~Y~i~a~i~~ 41 (110)
++.|.|+|-|+-.-| ..+|. ||++ ++-+|-|.+......
T Consensus 68 i~~G~~kFv~~adpPd~~~IP~~dilGvTvillt~sY~~qEFiRVGYYVnneY~d 122 (175)
T 2io5_A 68 VPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTE 122 (175)
T ss_dssp CCSEEEEEEEEECCCCGGGSCHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEESS
T ss_pred ccceEEEEEEEeCCCChhhCChhhcceeEEEEEEEEECCcEEEEEEEEEeeeeCC
Confidence 568999999999998 56773 3333 356888999988753
No 29
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=38.24 E-value=18 Score=20.92 Aligned_cols=17 Identities=24% Similarity=0.333 Sum_probs=12.6
Q ss_pred ecCeeeEEEeEEECCCC
Q psy8451 3 IPQGSHVYPFSYTLPPT 19 (110)
Q Consensus 3 l~~G~h~fpF~f~LP~~ 19 (110)
+.+|++.+|-++.+|.+
T Consensus 52 ~~~G~~~~~V~v~~P~G 68 (90)
T 3lyw_A 52 SEPGEHDYEVKVEPIPN 68 (90)
T ss_dssp CCSEEEEEECEECCCTT
T ss_pred CCCCcEeEEEEEECCCC
Confidence 46799988888766643
No 30
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=37.95 E-value=14 Score=25.75 Aligned_cols=14 Identities=29% Similarity=0.721 Sum_probs=10.3
Q ss_pred eecCeeeEEEeEEE
Q psy8451 2 EIPQGSHVYPFSYT 15 (110)
Q Consensus 2 ~l~~G~h~fpF~f~ 15 (110)
.|++|.|.|.|-..
T Consensus 213 ~L~~G~y~YkFiVD 226 (294)
T 3nme_A 213 ELPEGQFEYKYIID 226 (294)
T ss_dssp EECSEEEEEEEEET
T ss_pred ECCCceEEEEEEEC
Confidence 58888888877543
No 31
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=36.83 E-value=15 Score=25.25 Aligned_cols=29 Identities=17% Similarity=0.430 Sum_probs=18.1
Q ss_pred eecCeeeEEEeEE----ECCCCCCCceecCCeEE
Q psy8451 2 EIPQGSHVYPFSY----TLPPTIPSSFDGEHGRV 31 (110)
Q Consensus 2 ~l~~G~h~fpF~f----~LP~~lPsSf~~~~g~I 31 (110)
.|++|.|.|.|-. ..-.+.| +..+..|.+
T Consensus 47 ~LppG~y~YKFiVDG~w~~Dp~~p-~~~d~~G~~ 79 (252)
T 2qlv_B 47 RLLPGTHRFRFIVDNELRVSDFLP-TATDQMGNF 79 (252)
T ss_dssp EECSEEEEEEEEETTEEECCTTSC-EEBCSSCCC
T ss_pred ECCCCEEEEEEEECCEEEeCCCCC-EEecCCCcC
Confidence 5899999999843 3444555 344445543
No 32
>2i32_A Anti-silencing factor 1 paralog A; histone deposition, chromatin regulation, histone chaperones, ASF1, HIRA, CAF-1, replication chaperone; 2.70A {Homo sapiens} SCOP: b.1.22.1 PDB: 1tey_A 2iij_A 3aad_B
Probab=35.53 E-value=46 Score=21.88 Aligned_cols=39 Identities=33% Similarity=0.663 Sum_probs=28.1
Q ss_pred ecCeeeEEEeEEECC--CCCCC-------------ceec-CCeEEEEEEEEEEeC
Q psy8451 3 IPQGSHVYPFSYTLP--PTIPS-------------SFDG-EHGRVRYKVTARLDR 41 (110)
Q Consensus 3 l~~G~h~fpF~f~LP--~~lPs-------------Sf~~-~~g~I~Y~i~a~i~~ 41 (110)
++.|.|+|-|+-.-| ..+|. |+++ ++-+|-|.+......
T Consensus 90 i~~G~~kFvfeadpPd~~kIP~~dilGVTviLlt~sY~~qEFiRVGYYVnneY~d 144 (182)
T 2i32_A 90 VPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTE 144 (182)
T ss_dssp CCSEEEEEEEEECCCCGGGSCHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEESS
T ss_pred ccceEEEEEEEeCCCCcccCChhhcceeEEEEEEEEECCeEEEEEEEEEeeeeCC
Confidence 578999999999998 56773 2333 356778888877753
No 33
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=34.59 E-value=75 Score=19.05 Aligned_cols=14 Identities=21% Similarity=0.349 Sum_probs=7.6
Q ss_pred EEEEEEEeCCCCCC
Q psy8451 33 YKVTARLDRPWKFD 46 (110)
Q Consensus 33 Y~i~a~i~~~~~~~ 46 (110)
+.|+....|||...
T Consensus 93 ~~i~~~Y~RpWe~~ 106 (121)
T 2cio_B 93 HTLSLAYGRPWVGF 106 (121)
T ss_pred EEEEEEEECccCCC
Confidence 44555556666543
No 34
>1roc_A Anti-silencing protein 1; beta-sandwich, replication, chaperone; 1.50A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 2ygv_A
Probab=34.07 E-value=67 Score=20.52 Aligned_cols=39 Identities=41% Similarity=0.697 Sum_probs=28.9
Q ss_pred ecCeeeEEEeEEECC--CCCCCc-------------eec-CCeEEEEEEEEEEeC
Q psy8451 3 IPQGSHVYPFSYTLP--PTIPSS-------------FDG-EHGRVRYKVTARLDR 41 (110)
Q Consensus 3 l~~G~h~fpF~f~LP--~~lPsS-------------f~~-~~g~I~Y~i~a~i~~ 41 (110)
++.|.|+|-|+-.-| ..+|.+ +++ ++-+|-|.+......
T Consensus 66 i~~G~~kFv~~adpPd~~~Ip~~dilGvTvillt~sY~~qEFiRVGYYVnn~Y~d 120 (155)
T 1roc_A 66 VPVGVNKFVFSADPPSAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDE 120 (155)
T ss_dssp CCSEEEEEEEEECCCCGGGCCTHHHHSCEEEEEEEEETTEEEEEEEEEEEEEESS
T ss_pred ccceeEEEEEEcCCCCcccCChhhcceeEEEEEEEEECCcEEEEEEEEEeeeeCC
Confidence 568999999999998 567763 323 356788888887754
No 35
>2idc_A Anti-silencing protein 1 and histone H3 chimera; IG-like fold, ASF1, chaperone, chromatin, repli chaperone complex; 2.20A {Saccharomyces cerevisiae}
Probab=33.99 E-value=63 Score=21.14 Aligned_cols=40 Identities=40% Similarity=0.675 Sum_probs=29.4
Q ss_pred ecCeeeEEEeEEECC--CCCCCc-------------eec-CCeEEEEEEEEEEeCC
Q psy8451 3 IPQGSHVYPFSYTLP--PTIPSS-------------FDG-EHGRVRYKVTARLDRP 42 (110)
Q Consensus 3 l~~G~h~fpF~f~LP--~~lPsS-------------f~~-~~g~I~Y~i~a~i~~~ 42 (110)
++.|.|.|-|+-.-| ..+|.+ |++ ++-+|-|.+....+.+
T Consensus 67 i~~G~~kFv~~adpPd~~~IP~~dilGvTviLlt~sY~~qEFiRVGYYVnneY~d~ 122 (179)
T 2idc_A 67 VPVGVNKFVFSADPPSAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEE 122 (179)
T ss_dssp CCSEEEEEEEEECCCCGGGSCTTTTTSCEEEEEEEEETTEEEEEEEEEEEEEESSH
T ss_pred ccceeEEEEEEcCCCCcccCChhhcceeEEEEEEEEECCeEEEEEEEEEecccCCh
Confidence 568999999999988 566653 222 3568889988887643
No 36
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=33.67 E-value=83 Score=19.26 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=9.2
Q ss_pred EEEEEEEEeCCCCCC
Q psy8451 32 RYKVTARLDRPWKFD 46 (110)
Q Consensus 32 ~Y~i~a~i~~~~~~~ 46 (110)
.+.|+....|||...
T Consensus 103 ~~~i~~~Y~RpWE~~ 117 (131)
T 2h7w_A 103 THAVNLTYMRPWTGP 117 (131)
T ss_dssp EEEEEEEEECTTTCC
T ss_pred eEEEEEEEECccCCC
Confidence 355666667777644
No 37
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=33.60 E-value=36 Score=22.16 Aligned_cols=17 Identities=18% Similarity=0.528 Sum_probs=14.1
Q ss_pred eeEEEeEEECCCCCCCc
Q psy8451 7 SHVYPFSYTLPPTIPSS 23 (110)
Q Consensus 7 ~h~fpF~f~LP~~lPsS 23 (110)
.|.|..+|.+|.+-|.+
T Consensus 82 ~y~F~L~~~fPe~YP~~ 98 (172)
T 2z6o_A 82 KYEFDIEFDIPITYPTT 98 (172)
T ss_dssp EEEEEEEEECCTTTTTS
T ss_pred ceEEEEEEECCCCCCCC
Confidence 38999999999888764
No 38
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=33.11 E-value=84 Score=19.25 Aligned_cols=15 Identities=27% Similarity=0.598 Sum_probs=9.4
Q ss_pred EEEEEEEEeCCCCCC
Q psy8451 32 RYKVTARLDRPWKFD 46 (110)
Q Consensus 32 ~Y~i~a~i~~~~~~~ 46 (110)
.+.|+....|||..+
T Consensus 104 ~~~i~~~Y~RpWE~~ 118 (132)
T 2wgn_B 104 DDRLELVYRRPWEKD 118 (132)
T ss_dssp EEEEEEEEECTTSSS
T ss_pred eEEEEEEEECccCCC
Confidence 455666667777644
No 39
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=30.36 E-value=40 Score=19.67 Aligned_cols=23 Identities=4% Similarity=0.036 Sum_probs=19.7
Q ss_pred cCccEEEEEEeCCeeeeCCCeEEEE
Q psy8451 85 QSGPLTLSVSAPFSGFVPGQTIPCM 109 (110)
Q Consensus 85 ~~g~v~~~~~l~k~~y~pGe~i~i~ 109 (110)
.+|.|.++++=+. +.+|+.|.+.
T Consensus 47 eTG~I~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 47 DTARIRISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp SSCEEEEEEESSC--CCTTEEEEEE
T ss_pred CCCeEEEEEEcCc--cCCCCEEEEE
Confidence 6888999999887 9999998874
No 40
>3fo8_D Tail sheath protein GP18; mostly beta, viral structural protein, bacteriophage T4, viral protein; 1.80A {Enterobacteria phage T4}
Probab=29.74 E-value=58 Score=22.74 Aligned_cols=24 Identities=25% Similarity=0.495 Sum_probs=21.6
Q ss_pred CccEEEEEEeCCeeeeCCCeEEEE
Q psy8451 86 SGPLTLSVSAPFSGFVPGQTIPCM 109 (110)
Q Consensus 86 ~g~v~~~~~l~k~~y~pGe~i~i~ 109 (110)
-|.|+.+++.+-..|.-||+|.|.
T Consensus 14 ~~ni~~TIt~~GsnY~VGD~i~Vk 37 (283)
T 3fo8_D 14 AGNIEYTISTPGSNYAVGDKITVK 37 (283)
T ss_dssp TTCEEEEEEECCBSCCTTCEEEEE
T ss_pred cCcEEEEEecCCCCceeCCEEEEE
Confidence 478999999999999999999874
No 41
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=28.17 E-value=33 Score=21.36 Aligned_cols=18 Identities=22% Similarity=0.241 Sum_probs=15.4
Q ss_pred EEEeCCeeeeCCCeEEEE
Q psy8451 92 SVSAPFSGFVPGQTIPCM 109 (110)
Q Consensus 92 ~~~l~k~~y~pGe~i~i~ 109 (110)
-+++||....|||...|+
T Consensus 52 visiDk~vL~PGESA~it 69 (146)
T 2lv4_A 52 VMSIDKSVLSPGESATIT 69 (146)
T ss_dssp EEECCCCCBCTTCEEEEE
T ss_pred EEecCccccCCCcceEEE
Confidence 378999999999988765
No 42
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=27.73 E-value=71 Score=18.98 Aligned_cols=13 Identities=15% Similarity=0.215 Sum_probs=7.3
Q ss_pred EEEEEEEeCCCCC
Q psy8451 33 YKVTARLDRPWKF 45 (110)
Q Consensus 33 Y~i~a~i~~~~~~ 45 (110)
..|+....|||..
T Consensus 89 ~~i~~~Y~R~We~ 101 (116)
T 2c34_A 89 HTLELVYTRPFEG 101 (116)
T ss_dssp EEEEEEEEBTTTB
T ss_pred EEEEEEEECccCC
Confidence 4455555667654
No 43
>3m86_A Amoebiasin-2; cysteine protease inhibitor, protease, protein binding; HET: 1PE; 1.65A {Entamoeba histolytica} PDB: 3m88_A
Probab=26.86 E-value=1e+02 Score=18.10 Aligned_cols=14 Identities=21% Similarity=0.577 Sum_probs=9.5
Q ss_pred EEEEEEEeCCCCCC
Q psy8451 33 YKVTARLDRPWKFD 46 (110)
Q Consensus 33 Y~i~a~i~~~~~~~ 46 (110)
+.|+....|||..+
T Consensus 84 ~~i~~~Y~RpWe~~ 97 (111)
T 3m86_A 84 TTIKLGYSRPWEKG 97 (111)
T ss_dssp EEEEEEEECTTCCS
T ss_pred EEEEEEEECccCCC
Confidence 56666777887653
No 44
>2hue_A Anti-silencing protein 1; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Saccharomyces cerevisiae} SCOP: b.1.22.1 PDB: 1wg3_A
Probab=26.31 E-value=74 Score=20.75 Aligned_cols=40 Identities=40% Similarity=0.675 Sum_probs=29.0
Q ss_pred ecCeeeEEEeEEECC--CCCCCc-------------eec-CCeEEEEEEEEEEeCC
Q psy8451 3 IPQGSHVYPFSYTLP--PTIPSS-------------FDG-EHGRVRYKVTARLDRP 42 (110)
Q Consensus 3 l~~G~h~fpF~f~LP--~~lPsS-------------f~~-~~g~I~Y~i~a~i~~~ 42 (110)
++.|.|+|-|+-.-| ..+|.+ +++ ++-+|-|.+....+.+
T Consensus 71 i~~G~~kFv~~adpPd~~~IP~~dilGvTviLlt~sY~~qEFiRVGYYVnneY~d~ 126 (175)
T 2hue_A 71 VPVGVNKFVFSADPPSAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEE 126 (175)
T ss_dssp CCSEEEEEEEEECCCCGGGSCHHHHTSCEEEEEEEEETTEEEEEEEEEEEEEESSH
T ss_pred ccceeEEEEEEcCCCChhhCChhhccceEEEEEEEEECCeEEEEEEEEEecccCCh
Confidence 568999999999988 466653 222 3568889988887643
No 45
>2l9s_A PHD finger protein 12; protein-peptide complex, amphipathic helix motif, transcript; NMR {Homo sapiens} PDB: 2lkm_A
Probab=25.65 E-value=10 Score=19.20 Aligned_cols=14 Identities=21% Similarity=0.562 Sum_probs=10.1
Q ss_pred EeEEECCCCCCCce
Q psy8451 11 PFSYTLPPTIPSSF 24 (110)
Q Consensus 11 pF~f~LP~~lPsSf 24 (110)
|=+|+||+.|+.++
T Consensus 26 P~qF~LP~el~~~~ 39 (45)
T 2l9s_A 26 PTQFQLPNELTCTT 39 (45)
T ss_dssp CCCSSCCCSSCSSS
T ss_pred hhhhcCCccccccc
Confidence 44688998877665
No 46
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=25.48 E-value=29 Score=27.07 Aligned_cols=14 Identities=21% Similarity=0.373 Sum_probs=11.1
Q ss_pred CeecCeeeEEEeEE
Q psy8451 1 MEIPQGSHVYPFSY 14 (110)
Q Consensus 1 ~~l~~G~h~fpF~f 14 (110)
+.|++|+|+|.|-.
T Consensus 60 ~~L~~g~~~y~f~v 73 (696)
T 4aee_A 60 LKLWPGEYGYGFQI 73 (696)
T ss_dssp EEECSEEEEEEEEE
T ss_pred EEcCCceEEEEEEE
Confidence 46999999888844
No 47
>1gvp_A Gene V protein; DNA-binding protein, DNA replication; 1.60A {Escherichia coli} SCOP: b.40.4.7 PDB: 1vqb_A 2gn5_A 1vqj_A 1vqi_A 1vqg_A 1vqh_A 1vqf_A 1yhb_A 1yha_A 2gva_A 2gvb_A 1vqd_A 1vqe_A 1gkh_A 1vqc_A 1ae2_A 1vqa_A 1ae3_A
Probab=24.42 E-value=46 Score=19.15 Aligned_cols=14 Identities=14% Similarity=-0.071 Sum_probs=10.8
Q ss_pred eeeEEEeEEECCCC
Q psy8451 6 GSHVYPFSYTLPPT 19 (110)
Q Consensus 6 G~h~fpF~f~LP~~ 19 (110)
|.|-.+|.+.|-.+
T Consensus 39 G~fp~~~~v~Le~g 52 (87)
T 1gvp_A 39 NEYPVLVKITLDEG 52 (87)
T ss_dssp SSSCEEEEEECCTT
T ss_pred CCccEEEEEecCCC
Confidence 66788888888755
No 48
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=23.91 E-value=39 Score=25.96 Aligned_cols=14 Identities=36% Similarity=0.809 Sum_probs=11.5
Q ss_pred CeecCeeeEEEeEE
Q psy8451 1 MEIPQGSHVYPFSY 14 (110)
Q Consensus 1 ~~l~~G~h~fpF~f 14 (110)
+.|++|.|.|.|.+
T Consensus 57 v~L~~G~y~Y~f~v 70 (645)
T 4aef_A 57 IALPEGVWHYAFSI 70 (645)
T ss_dssp EEECSEEEEEEEEE
T ss_pred EEeCCceEEEEEEE
Confidence 46899999988865
No 49
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=21.54 E-value=1.2e+02 Score=17.00 Aligned_cols=36 Identities=31% Similarity=0.403 Sum_probs=20.6
Q ss_pred EEeEEECCCCCCCceecCCeEEEEEEEEEEeCCCCCCceEEEEEEEEc
Q psy8451 10 YPFSYTLPPTIPSSFDGEHGRVRYKVTARLDRPWKFDKTTEAVFSVVT 57 (110)
Q Consensus 10 fpF~f~LP~~lPsSf~~~~g~I~Y~i~a~i~~~~~~~~~~~~~~~V~~ 57 (110)
|.++|+||.+.+. | .|+|+|..+. ....++.|.|.+
T Consensus 63 ~~~~f~Lp~~~~~------G--~y~i~~~~~~----~~~~~~~F~Vee 98 (102)
T 2p9r_A 63 KQFSFPLSSEPFQ------G--SYKVVVQKKS----GGRTEHPFTVEE 98 (102)
T ss_dssp EEEEEECCSSCCC------E--EEEEEEECTT----SCEEEEEEEECC
T ss_pred EEEEEECCCCCCC------e--eEEEEEEECC----CCeEEEEEEEEE
Confidence 4567788877653 2 3566666532 114566777644
No 50
>2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=21.45 E-value=1.1e+02 Score=17.82 Aligned_cols=26 Identities=8% Similarity=0.177 Sum_probs=20.4
Q ss_pred ccCccEEEEEEe--CCeeeeCCCeEEEE
Q psy8451 84 RQSGPLTLSVSA--PFSGFVPGQTIPCM 109 (110)
Q Consensus 84 ~~~g~v~~~~~l--~k~~y~pGe~i~i~ 109 (110)
=.+|.|.++++= ....+.+|+.|.|.
T Consensus 43 DeTG~I~~t~W~~~~~~~~~~G~~V~i~ 70 (109)
T 2kbn_A 43 DETGIIKFTIWKNAELPLLEQGESYLLR 70 (109)
T ss_dssp CTTCCEEEEEEGGGCCCCCCTTCEEEEE
T ss_pred CCCCeEEEEEECcccccccCCCCEEEEE
Confidence 367888988886 45688899988874
No 51
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=20.92 E-value=56 Score=25.04 Aligned_cols=23 Identities=22% Similarity=0.239 Sum_probs=19.6
Q ss_pred cEEEEEEeCCeeeeCCCeEEEEC
Q psy8451 88 PLTLSVSAPFSGFVPGQTIPCMI 110 (110)
Q Consensus 88 ~v~~~~~l~k~~y~pGe~i~i~v 110 (110)
.-.+.+.+++..|.+||++.++|
T Consensus 431 ~~~l~i~~~~~~~~~Ge~~~v~v 453 (645)
T 2hr0_A 431 NNYLHLSVLRTELRPGETLNVNF 453 (645)
T ss_dssp CCEEEEEECCCCCCTTSEEEEEE
T ss_pred CCeEEEecCCCCcCCCCEEEEEE
Confidence 45778899999999999998864
No 52
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=20.87 E-value=1.8e+02 Score=18.71 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=20.8
Q ss_pred eeeEEEeEEECC-CCCCCceec--CCeEEEEEEEEEEe
Q psy8451 6 GSHVYPFSYTLP-PTIPSSFDG--EHGRVRYKVTARLD 40 (110)
Q Consensus 6 G~h~fpF~f~LP-~~lPsSf~~--~~g~I~Y~i~a~i~ 40 (110)
|+-.+.....++ .++.+.+.+ ....|.|.+++.+.
T Consensus 109 g~~~v~Vpv~v~~~~l~~~~~~l~~~~~i~Y~L~g~L~ 146 (174)
T 1yyc_A 109 GTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLT 146 (174)
T ss_dssp EEEEEEEEEEESHHHHHHTCCCCCSSEEECEEEEEEEE
T ss_pred CcEEEEEEEEEEHHHHHHHHHhcCCCCccceEEEEEEE
Confidence 555555555555 444444432 45788888888764
Done!