RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy8454
(936 letters)
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can
range from 2 to over 20 (ankyrins, for example). ANK
repeats may occur in combinations with other types of
domains. The structural repeat unit contains two
antiparallel helices and a beta-hairpin, repeats are
stacked in a superhelical arrangement; this alignment
contains 4 consecutive repeats.
Length = 126
Score = 129 bits (325), Expect = 5e-35
Identities = 54/127 (42%), Positives = 79/127 (62%), Gaps = 2/127 (1%)
Query: 801 NICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLL 860
N + DG T LH+A S GH ++V+LL+ AD+N + TPLH+A +N +L IV+LL
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGR-TPLHLAAKNGHLEIVKLL 59
Query: 861 LAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTS 920
L +VNA+D GNT LH AA N + ++ LLLK GA ++ G+T LH+A +
Sbjct: 60 LEKG-ADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGH 118
Query: 921 LSLVRVL 927
L +V++L
Sbjct: 119 LEVVKLL 125
Score = 126 bits (319), Expect = 4e-34
Identities = 57/129 (44%), Positives = 80/129 (62%), Gaps = 6/129 (4%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSG 578
D+ G T LH+AA G ++VV L+LE GAD N++D G +PLH AA GH ++ LLL G
Sbjct: 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG 63
Query: 579 ASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWG 638
A +N D +GNT LHLA NG+ VK L+ ++NA + G +PLH AA+ G
Sbjct: 64 ADVNARDKDGNTPLHLAARNGNLDVVKLLLKH------GADVNARDKDGRTPLHLAAKNG 117
Query: 639 YTSIIQLLL 647
+ +++LLL
Sbjct: 118 HLEVVKLLL 126
Score = 121 bits (306), Expect = 2e-32
Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 9/131 (6%)
Query: 549 NSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALI 608
N++D G +PLH AA+ GH V+ LLL +GA +N DN+G T LHLA NGH VK L+
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60
Query: 609 YFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA- 667
++NA + G++PLH AAR G +++LLL HGA+ +K TPL A
Sbjct: 61 EKGA------DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAA 114
Query: 668 --NNLHVAKLL 676
+L V KLL
Sbjct: 115 KNGHLEVVKLL 125
Score = 105 bits (264), Expect = 9e-27
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 795 DECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNL 854
+ ++N ++DG T LH+A GH ++V+LL+ AD+N + TPLH+A +N NL
Sbjct: 28 ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGN-TPLHLAARNGNL 86
Query: 855 SIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLL 895
+V+LLL +VNA+D G T LH AA N H + LLL
Sbjct: 87 DVVKLLLKHG-ADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126
Score = 102 bits (255), Expect = 2e-25
Identities = 44/91 (48%), Positives = 59/91 (64%)
Query: 518 MDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHS 577
D+ G T LH+AA G +++V L+LE GAD N++D G +PLH AA G+ +V+ LLL
Sbjct: 36 KDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKH 95
Query: 578 GASINLTDNEGNTALHLATNNGHETCVKALI 608
GA +N D +G T LHLA NGH VK L+
Sbjct: 96 GADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies).
Length = 91
Score = 97.7 bits (244), Expect = 2e-24
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 811 LHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNA 870
LH+A G+ +LV+LL+ AD+N+ T LH+A +N NL IV+LLL +VNA
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLG---DTDTALHLAARNGNLEIVKLLLEHG-ADVNA 56
Query: 871 QDYRGNTALHYAAINNHTNLATLLLKSGARPQIKN 905
+D GNTALH AA N + + LLL+ GA +K+
Sbjct: 57 KDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 87.3 bits (217), Expect = 1e-20
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 559 LHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNL 618
LH AA G+ ++ LLL GA +NL D +TALHLA NG+ VK L+ E
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLL---EHGA--- 52
Query: 619 NINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLEN 657
++NA + G++ LH AAR G I++LLL+HGA+ L++
Sbjct: 53 DVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 84.6 bits (210), Expect = 8e-20
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 526 LHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTD 585
LH+AA G +++V L+LE GAD N D + LH AA G+ ++ LLL GA +N D
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGADVNAKD 58
Query: 586 NEGNTALHLATNNGHETCVKALI 608
+GNTALHLA NG+ VK L+
Sbjct: 59 KDGNTALHLAARNGNLEIVKLLL 81
Score = 74.6 bits (184), Expect = 2e-16
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 845 LHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIK 904
LH+A +N NL +V+LLL K +VN D +TALH AA N + + LLL+ GA K
Sbjct: 1 LHLAAKNGNLELVKLLLE-KGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAK 57
Query: 905 NHYGQTCLHMAQQMTSLSLVRVL 927
+ G T LH+A + +L +V++L
Sbjct: 58 DKDGNTALHLAARNGNLEIVKLL 80
Score = 70.0 bits (172), Expect = 1e-14
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 524 TVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINL 583
T LH+AA G +++V L+LE GAD N++D G + LH AA G+ ++ LLL GA INL
Sbjct: 30 TALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINL 89
Query: 584 TD 585
D
Sbjct: 90 KD 91
Score = 67.3 bits (165), Expect = 1e-13
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
++N+ ++D TALH+A G+ ++V+LL+ + AD+N + T LH+A +N NL IV+
Sbjct: 22 DVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKDKDGN-TALHLAARNGNLEIVK 78
Query: 859 LLLAAKQCNVNAQD 872
LLL ++N +D
Sbjct: 79 LLL-EHGADINLKD 91
Score = 60.0 bits (146), Expect = 3e-11
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 592 LHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGA 651
LHLA NG+ VK L+ E+ ++N + D+ LH AAR G I++LLL+HGA
Sbjct: 1 LHLAAKNGNLELVKLLL---EKGA---DVNLGDT--DTALHLAARNGNLEIVKLLLEHGA 52
Query: 652 NPTLENKRKVTPLQNA---NNLHVAKLL 676
+ ++K T L A NL + KLL
Sbjct: 53 DVNAKDKDGNTALHLAARNGNLEIVKLL 80
Score = 41.9 bits (99), Expect = 9e-05
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 460 LFEFARLGDGDKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAIN--LKHSQSKPTTQS 517
L A+ G+ + V+ +L++ ++ H L + + E + L+H +
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDTDTALH-LAARNGNLEIVKLLLEHGADV---NA 56
Query: 518 MDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQD 552
D G T LH+AA G +++V L+LE GAD N +D
Sbjct: 57 KDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction
only].
Length = 235
Score = 79.1 bits (194), Expect = 2e-16
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 8/139 (5%)
Query: 796 ECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLS 855
++ + DG LH A S G +V+LL+ AD+N TPLH+A N N
Sbjct: 62 VDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGD-TPLHLAALNGNPP 120
Query: 856 -----IVRLLLA--AKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYG 908
+ +LLL A N +D GNT LH+AA+N ++ LLL++GA P +N YG
Sbjct: 121 EGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYG 180
Query: 909 QTCLHMAQQMTSLSLVRVL 927
T L A + + LV++L
Sbjct: 181 VTALDPAAKNGRIELVKLL 199
Score = 74.5 bits (182), Expect = 8e-15
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Query: 502 EAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHY 561
A+ L S + L + ++ L L + ++DL G PLH
Sbjct: 21 VALLLLLSLDLSNPSDKKLNLYLELALLPAASLSEL-LLKLIVDRHLAARDLDGRLPLHS 79
Query: 562 AATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHET-----CVKALIYFNEQEVL 616
AA++G ++ LLL SGA +N D +G+T LHLA NG+ K L+
Sbjct: 80 AASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD--- 136
Query: 617 NLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLL 676
N + G++PLH AA G I++LLL+ GA+P N VT L A +L+
Sbjct: 137 LDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELV 196
Query: 677 N 677
Sbjct: 197 K 197
Score = 65.2 bits (158), Expect = 1e-11
Identities = 50/166 (30%), Positives = 69/166 (41%), Gaps = 10/166 (6%)
Query: 475 ILQEENKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGR 534
I+ D + H S D + L S + + D G T LH+AAL G
Sbjct: 61 IVDRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDAD--GDTPLHLAALNGN 118
Query: 535 -----IKVVDLVLELGADT---NSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDN 586
I+V L+LE GAD N +D G +PLH+AA G +++ LLL +GA N ++
Sbjct: 119 PPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNS 178
Query: 587 EGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLH 632
G TAL A NG VK L+ L +
Sbjct: 179 YGVTALDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGVANANVSKR 224
Score = 64.8 bits (157), Expect = 2e-11
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 798 LNINICNSDGYTALHIA-----TSLGHYDLVRLLINYRADINIVTR--VKQLTPLHIACQ 850
++N ++DG T LH+A G+ ++ +LL+ AD+++ TPLH A
Sbjct: 97 ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAAL 156
Query: 851 NNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSG 898
N + IV LLL A + N+++ G TAL AA N L LLL G
Sbjct: 157 NGDADIVELLLEAG-ADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203
Score = 51.0 bits (121), Expect = 8e-07
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 783 EDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQL 842
+ ++ + ++ + N + + Y L + + +L+ LI R
Sbjct: 17 DLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDG--R 74
Query: 843 TPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTN-----LATLLLKS 897
PLH A + IV+LLLA+ +VNA+D G+T LH AA+N + +A LLL++
Sbjct: 75 LPLHSAASKGDDKIVKLLLASGA-DVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA 133
Query: 898 GARPQI---KNHYGQTCLHMAQQMTSLSLVRVL 927
GA + ++ G T LH A +V +L
Sbjct: 134 GADLDVNNLRDEDGNTPLHWAALNGDADIVELL 166
Score = 50.6 bits (120), Expect = 1e-06
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
N+ + DG T LH A G D+V LL+ AD N T L A +N + +V+
Sbjct: 139 VNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGV-TALDPAAKNGRIELVK 197
Query: 859 LLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLK 896
LLL + A + N NL +L++
Sbjct: 198 LLLDKGLHLSLLKFNLEGVANANVSKRNILNLTSLIIA 235
Score = 36.3 bits (83), Expect = 0.042
Identities = 31/107 (28%), Positives = 42/107 (39%)
Query: 809 TALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNV 868
L I LV LL+ D++ + K L +A LL ++
Sbjct: 7 ALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHL 66
Query: 869 NAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA 915
A+D G LH AA + LLL SGA K+ G T LH+A
Sbjct: 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLA 113
>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional.
Length = 422
Score = 77.0 bits (190), Expect = 1e-14
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 799 NINICNSDGYTALHIA--TSLGHYDLVRLLINYRADINIVTRVKQLTPLHIA--CQNNNL 854
N+N +++G T L A Y +V L++ A++NI LH+ +L
Sbjct: 98 NVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKN-SDGENLLHLYLESNKIDL 156
Query: 855 SIVRLL---------------LAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGA 899
I++LL L + +N +D G T LHYA NN+ LL GA
Sbjct: 157 KILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGA 216
Query: 900 RPQIKNHYGQTCLHMA 915
P + N YG T LH+A
Sbjct: 217 NPNLVNKYGDTPLHIA 232
Score = 76.2 bits (188), Expect = 2e-14
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 17/159 (10%)
Query: 535 IKVVDLVLELGADTNSQDLCGCSPLHYAATR--GHQNVLLLLLHSGASINLTDNEGNTAL 592
++V L+LE GA+ N+ D G +PL YA ++ +++ LL +GA++N+ +++G L
Sbjct: 86 KEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLL 145
Query: 593 HLATNNGH------ETCVKALIYFNEQEVLNL------NINAVNNQGDSPLHAAARWGYT 640
HL + + + + N + +N IN + G +PLH A
Sbjct: 146 HLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNP 205
Query: 641 SIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLL 676
++ LLD GANP L NK TPL A NN + KLL
Sbjct: 206 EFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLL 244
Score = 62.4 bits (152), Expect = 5e-10
Identities = 46/154 (29%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 519 DDRGFTVLHVAALY--GRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNV----LL 572
D+ G T L A +V+ +L+ GA+ N ++ G + LH ++ LL
Sbjct: 103 DNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLL 162
Query: 573 L--------------LLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNL 618
+ LL G IN+ D G T LH A N + VK L+ L
Sbjct: 163 IDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLD------LGA 216
Query: 619 NINAVNNQGDSPLHAAARWGYTSIIQLLLDHGAN 652
N N VN GD+PLH A I +LLL++G +
Sbjct: 217 NPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 250
Score = 60.8 bits (148), Expect = 1e-09
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 24/124 (19%)
Query: 521 RGFTVLHVAALYGRIKV------------------VDLVLELGADTNSQDLCGCSPLHYA 562
G +LH+ +I + V+ +L G N +D+ G +PLHYA
Sbjct: 140 DGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYA 199
Query: 563 ATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINA 622
+ + LL GA+ NL + G+T LH+A N ++ K L+ +I
Sbjct: 200 VYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP------SIKT 253
Query: 623 VNNQ 626
+
Sbjct: 254 IIET 257
Score = 58.9 bits (143), Expect = 7e-09
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 34/179 (18%)
Query: 526 LHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGH-----QNVLLLLLHSGAS 580
L++A I VV ++L+ GAD NS +PLHY + + + ++ LLL GA+
Sbjct: 39 LYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGAN 98
Query: 581 INLTDNEGNTALHLATNN--GHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWG 638
+N DN G T L A + + V+ L+ N+N N+ G++ LH
Sbjct: 99 VNAPDNNGITPLLYAISKKSNSYSIVEYLL------DNGANVNIKNSDGENLLHLYLESN 152
Query: 639 Y--TSIIQLLLDHGAN---------------PTLE-NKRKVTPLQNA---NNLHVAKLL 676
I++LL+D G + P + TPL A NN K L
Sbjct: 153 KIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYL 211
Score = 54.7 bits (132), Expect = 1e-07
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 534 RIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALH 593
++K + ++ + PL+ A + +V+ +LL +GA IN + +T LH
Sbjct: 14 KVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLH 73
Query: 594 LATNNGH-ETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAA--RWGYTSIIQLLLDHG 650
+N + T VK ++ + N+NA +N G +PL A + SI++ LLD+G
Sbjct: 74 YLSNIKYNLTDVKEIVKLLLE--YGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNG 131
Query: 651 ANPTLENKRKVTPL-----QNANNLHVAKLL 676
AN ++N L N +L + KLL
Sbjct: 132 ANVNIKNSDGENLLHLYLESNKIDLKILKLL 162
Score = 53.9 bits (130), Expect = 2e-07
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 27/154 (17%)
Query: 799 NINICNSDGYTALHIATSLGHY-----DLVRLLINYRADINIVTRVKQLTPLHIACQN-- 851
+IN + T LH +++ + ++V+LL+ Y A++N +TPL A
Sbjct: 60 DINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVN-APDNNGITPLLYAISKKS 118
Query: 852 NNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATL------------------ 893
N+ SIV LL NVN ++ G LH +N +L L
Sbjct: 119 NSYSIVEYLLD-NGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNY 177
Query: 894 LLKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
LL G IK+ YG T LH A + V+ L
Sbjct: 178 LLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYL 211
Score = 53.1 bits (128), Expect = 4e-07
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
INI + G+T LH A + + V+ L++ A+ N+V TPLHIA NNN I +
Sbjct: 184 PINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVN-KYGDTPLHIAILNNNKEIFK 242
Query: 859 LLL 861
LLL
Sbjct: 243 LLL 245
Score = 48.1 bits (115), Expect = 1e-05
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSG 578
D GFT LH A + V +L+LGA+ N + G +PLH A ++ + LLL++G
Sbjct: 189 DVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNG 248
Query: 579 ASIN 582
SI
Sbjct: 249 PSIK 252
>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional.
Length = 471
Score = 75.1 bits (185), Expect = 6e-14
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 522 GFTVLHVAALYG---RIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQ-NVLLLLLHS 577
G T LH+ Y +V L+LE GAD N+ + CG +PLH +V+ LL+ +
Sbjct: 47 GKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKA 106
Query: 578 GASINLTDNEGNTALH--LATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAA 635
GA +N D G T LH L+ N + ++ L+ ++NA++ G +PL
Sbjct: 107 GADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRK------GADVNALDLYGMTPLAVLL 160
Query: 636 RWGYTSI--IQLLLDHGANPT 654
+ ++ ++LL+D GA+
Sbjct: 161 KSRNANVELLRLLIDAGADVY 181
Score = 65.0 bits (159), Expect = 9e-11
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 518 MDDRGFTVLHVAALYG--------RIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQN 569
+D ++ AALY ++ V +L GAD N + G +PLH +
Sbjct: 2 EEDESVDIIMEAALYDYLLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEK 61
Query: 570 ---VLLLLLHSGASINLTDNEGNTALHL-ATNNGHETCVKALIYFNEQEVLNLNINAVNN 625
++ LLL +GA +N + G T LHL N +K LI ++NA +
Sbjct: 62 VKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIK------AGADVNAKDK 115
Query: 626 QGDSPLHAAAR--WGYTSIIQLLLDHGANPTLENKRKVTPL 664
G +PLH +I+LLL GA+ + +TPL
Sbjct: 116 VGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPL 156
Score = 62.7 bits (153), Expect = 5e-10
Identities = 76/352 (21%), Positives = 118/352 (33%), Gaps = 78/352 (22%)
Query: 569 NVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNL------NINA 622
+ LL +GA +N G T LHL + E +++ L ++NA
Sbjct: 28 EEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVK---------DIVRLLLEAGADVNA 78
Query: 623 VNNQGDSPLHAAARWGYT-SIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVH 681
G +PLH T +I+LL+ GA+ ++K TPL L ++
Sbjct: 79 PERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLH-------VYLSGFNIN 131
Query: 682 KPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVE 741
+ L+ K +DVN ++ +
Sbjct: 132 --PKVIRLLLRKG------------------ADVNALDLYGMT----------------- 154
Query: 742 QLFALIENNEIK------LIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTD 795
L L+++ LI + + + + H Q K + +V R D
Sbjct: 155 PLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCD 214
Query: 796 ECLNINICNSDGYTALHIA---TSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNN 852
+ G T LH +S ++ LLI IN R Q TPLH A N
Sbjct: 215 P----AATDMLGNTPLHSMATGSSCKRSLVLPLLIA-GISINARNRYGQ-TPLHYAAVFN 268
Query: 853 NLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIK 904
N R L+A ++NA GNT L NN+ L P +
Sbjct: 269 NPRACRRLIALG-ADINAVSSDGNTPLSLMVRNNNGRAVRAALAK--NPSAE 317
Score = 62.0 bits (151), Expect = 8e-10
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 519 DDRGFTVLHVAALYG---RIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLL 575
D G T LH A R V+ L++ G N+++ G +PLHYAA + L+
Sbjct: 219 DMLGNTPLHSMATGSSCKRSLVLPLLIA-GISINARNRYGQTPLHYAAVFNNPRACRRLI 277
Query: 576 HSGASINLTDNEGNTALHLATNNGHETCVKALI 608
GA IN ++GNT L L N + V+A +
Sbjct: 278 ALGADINAVSSDGNTPLSLMVRNNNGRAVRAAL 310
Score = 61.2 bits (149), Expect = 2e-09
Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 807 GYTALHIATSLGHY------DLVRLLINYRADINIVTRVKQLTPLHIACQNNN-LSIVRL 859
G T LH HY D+VRLL+ AD+N R TPLH+ N L +++L
Sbjct: 47 GKTPLH---LYLHYSSEKVKDIVRLLLEAGADVNAPERCG-FTPLHLYLYNATTLDVIKL 102
Query: 860 LLAAKQCNVNAQDYRGNTALH-YAA-INNHTNLATLLLKSGARPQIKNHYGQTCLH 913
L+ A +VNA+D G T LH Y + N + + LLL+ GA + YG T L
Sbjct: 103 LIKAG-ADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLA 157
Score = 59.7 bits (145), Expect = 4e-09
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 799 NINICNSDGYTALHI-ATSLG-HYDLVRLLINYRADINIVTRVKQLTPLHIACQNNN--L 854
++N + G T LH+ + + ++RLL+ AD+N + +TPL + ++ N +
Sbjct: 109 DVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN-ALDLYGMTPLAVLLKSRNANV 167
Query: 855 SIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATL--LLKSGARPQIKNHYGQTCL 912
++RLL+ A +V A D R + LH+ + + L+++G P + G T L
Sbjct: 168 ELLRLLIDAG-ADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPL 226
Query: 913 HMAQQMTS 920
H +S
Sbjct: 227 HSMATGSS 234
Score = 57.7 bits (140), Expect = 1e-08
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 774 PLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHI----ATSLGHYDLVRLLINY 829
PL + V+ R + + ++N G+T LH+ AT+L D+++LLI
Sbjct: 50 PLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTL---DVIKLLIKA 106
Query: 830 RADINIVTRVKQLTPLHIACQNNNL--SIVRLLLAAKQCNVNAQDYRGNTALHYAAINNH 887
AD+N +V + TPLH+ N+ ++RLLL +VNA D G T L + +
Sbjct: 107 GADVNAKDKVGR-TPLHVYLSGFNINPKVIRLLLRKG-ADVNALDLYGMTPLAVLLKSRN 164
Query: 888 TNLATL--LLKSGARPQIKNHYGQTCLH 913
N+ L L+ +GA + ++ LH
Sbjct: 165 ANVELLRLLIDAGADVYAVDDRFRSLLH 192
Score = 55.8 bits (135), Expect = 7e-08
Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 799 NINICNSDGYTALHIATSLGHYD--LVRLLINYRADINIVTRVKQLTPLHIACQN--NNL 854
++N + G T L + + + L+RLLI+ AD+ + + LH Q+
Sbjct: 144 DVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADV-YAVDDRFRSLLHHHLQSFKPRA 202
Query: 855 SIVRLLLAAKQCNVNAQDYRGNTALHYAAINN---HTNLATLLLKSGARPQIKNHYGQTC 911
IVR L+ A C+ A D GNT LH A + + + LL+ G +N YGQT
Sbjct: 203 RIVRELIRAG-CDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIA-GISINARNRYGQTP 260
Query: 912 LHMA 915
LH A
Sbjct: 261 LHYA 264
Score = 54.3 bits (131), Expect = 2e-07
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 518 MDDRGFTVLHVAALYGR--IKVVDLVLELGADTNSQDLCGCSPLHYAA--TRGHQNVLLL 573
+D G T L V ++++ L+++ GAD + D S LH+ + ++
Sbjct: 148 LDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRE 207
Query: 574 LLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVL--NLNINAVNNQGDSPL 631
L+ +G TD GNT LH +C ++L+ +L ++INA N G +PL
Sbjct: 208 LIRAGCDPAATDMLGNTPLHSMAT--GSSCKRSLV----LPLLIAGISINARNRYGQTPL 261
Query: 632 HAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA--NNLHVA 673
H AA + + L+ GA+ + TPL NN A
Sbjct: 262 HYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRA 305
Score = 46.2 bits (110), Expect = 6e-05
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 821 DLVRLLINYRADINIVTRVKQLTPLHIACQNNN---LSIVRLLLAAKQCNVNAQDYRGNT 877
+ VR L+ AD+N + TPLH+ ++ IVRLLL A +VNA + G T
Sbjct: 28 EEVRRLLAAGADVNFRGEYGK-TPLHLYLHYSSEKVKDIVRLLLEAG-ADVNAPERCGFT 85
Query: 878 ALHYAAINNHT-NLATLLLKSGARPQIKNHYGQTCLH 913
LH N T ++ LL+K+GA K+ G+T LH
Sbjct: 86 PLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLH 122
Score = 37.3 bits (87), Expect = 0.037
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 517 SMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLH 576
+ + G T LH AA++ + ++ LGAD N+ G +PL + + L
Sbjct: 252 ARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALA 311
Query: 577 SGASINLTDNEGNTALHLATNNGH 600
S L+ A+ G
Sbjct: 312 KNPSAETVAA----TLNTASVAGG 331
Score = 31.5 bits (72), Expect = 2.2
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 847 IACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLA---TLLLKSGARPQI 903
+ N + VR LLA +VN + G T LH + + LLL++GA
Sbjct: 20 LNASNVTVEEVRRLLA-AGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNA 78
Query: 904 KNHYGQTCLHM-AQQMTSLSLVRVL 927
G T LH+ T+L ++++L
Sbjct: 79 PERCGFTPLHLYLYNATTLDVIKLL 103
>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional.
Length = 434
Score = 74.2 bits (182), Expect = 9e-14
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 537 VVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLAT 596
++ +L+ G D N +D + LHYA +G + +L GA +N+ D+ G +H+A
Sbjct: 106 MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAI 165
Query: 597 NNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLE 656
+ +K L+ ++ N+ +N G+SPLH AA +G + I+LL+DHG + +
Sbjct: 166 KHNFFDIIKLLL----EKGAYANVK--DNNGESPLHNAAEYGDYACIKLLIDHGNHIMNK 219
Query: 657 NKRKVTPLQNA 667
K TPL NA
Sbjct: 220 CKNGFTPLHNA 230
Score = 69.6 bits (170), Expect = 3e-12
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 499 DCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSP 558
DC +N+K ++ K T LH A G ++ + ++ E GAD N +D GC P
Sbjct: 112 DCGIDVNIKDAELK-----------TFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYP 160
Query: 559 LHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNL 618
+H A +++ LLL GA N+ DN G + LH A G C+K LI
Sbjct: 161 IHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGN------ 214
Query: 619 NINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANN 669
+I G +PLH A S I+LL+++ A+ ++ TPL +A N
Sbjct: 215 HIMNKCKNGFTPLHNAIIHN-RSAIELLINN-ASINDQDIDGSTPLHHAIN 263
Score = 60.7 bits (147), Expect = 2e-09
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 793 VTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNN 852
+ D +++NI +++ T LH A G + +++L Y AD+NI P+HIA ++N
Sbjct: 110 ILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNI-EDDNGCYPIHIAIKHN 168
Query: 853 NLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCL 912
I++LLL K N +D G + LH AA LL+ G K G T L
Sbjct: 169 FFDIIKLLL-EKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPL 227
Query: 913 HMA 915
H A
Sbjct: 228 HNA 230
Score = 51.5 bits (123), Expect = 1e-06
Identities = 28/110 (25%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 821 DLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALH 880
D+++ +++ D+NI + T LH A + +L +++L +VN +D G +H
Sbjct: 105 DMIKTILDCGIDVNIKDA-ELKTFLHYAIKKGDLESIKMLFEYG-ADVNIEDDNGCYPIH 162
Query: 881 YAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVR-VLTH 929
A +N ++ LLL+ GA +K++ G++ LH A + + ++ ++ H
Sbjct: 163 IAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDH 212
Score = 50.0 bits (119), Expect = 4e-06
Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 29/158 (18%)
Query: 533 GRIKVVDLVLELGADTNSQDLCGCSPLHYA-ATRGHQNVLLLL----------------- 574
G K+V+L ++ GAD N + PL A H + LL+
Sbjct: 46 GDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKD 105
Query: 575 -----LHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDS 629
L G +N+ D E T LH A G +K L + ++NI N G
Sbjct: 106 MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGA----DVNIEDDN--GCY 159
Query: 630 PLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA 667
P+H A + + II+LLL+ GA +++ +PL NA
Sbjct: 160 PIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNA 197
Score = 48.0 bits (114), Expect = 2e-05
Identities = 77/347 (22%), Positives = 142/347 (40%), Gaps = 75/347 (21%)
Query: 573 LLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLH 632
++ + G IN++ +E T L A +G V+ I IN +N + PL
Sbjct: 20 IIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGAD------INHINTKIPHPLL 73
Query: 633 AAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNYLVP 692
A + G II+LL+D+G + + + P+ + +L+ +
Sbjct: 74 TAIKIGAHDIIKLLIDNGVDTS------ILPIPCIEKDMIKTILDCGI------------ 115
Query: 693 KEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEI 752
+VN+++ E+K L I+ ++
Sbjct: 116 -----------------------------DVNIKD-------AELKTF--LHYAIKKGDL 137
Query: 753 KLIKSYFGLSNEEKVPD-NACHPLCQCAKCKE-DVVESESRPVTDECLNINICNSDGYTA 810
+ IK F + + D N C+P+ K D++ + + ++ N+ +++G +
Sbjct: 138 ESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDII----KLLLEKGAYANVKDNNGESP 193
Query: 811 LHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNA 870
LH A G Y ++LLI++ I + TPLH A +N S + LL+ ++N
Sbjct: 194 LHNAAEYGDYACIKLLIDHGNHIMNKCK-NGFTPLHNAIIHNR-SAIELLI--NNASIND 249
Query: 871 QDYRGNTALHYAAINN--HTNLATLLLKSGARPQIKNHYGQTCLHMA 915
QD G+T LH+ AIN ++ +LL A IK++ G+ + A
Sbjct: 250 QDIDGSTPLHH-AINPPCDIDIIDILLYHKADISIKDNKGENPIDTA 295
Score = 43.4 bits (102), Expect = 4e-04
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 520 DRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRG-HQNVLLLLLHSG 578
GFT LH A ++ R ++L++ A N QD+ G +PLH+A +++ +LL+
Sbjct: 221 KNGFTPLHNAIIHNR-SAIELLIN-NASINDQDIDGSTPLHHAINPPCDIDIIDILLYHK 278
Query: 579 ASINLTDNEGNTALHLA 595
A I++ DN+G + A
Sbjct: 279 ADISIKDNKGENPIDTA 295
Score = 42.3 bits (99), Expect = 0.001
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 25/160 (15%)
Query: 797 CLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSI 856
C+NI++ + T L A G +V L I + ADIN + K PL A + I
Sbjct: 27 CINISV--DETTTPLIDAIRSGDAKIVELFIKHGADINHIN-TKIPHPLLTAIKIGAHDI 83
Query: 857 VRLLL--------------------AAKQC--NVNAQDYRGNTALHYAAINNHTNLATLL 894
++LL+ C +VN +D T LHYA +L
Sbjct: 84 IKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKML 143
Query: 895 LKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVLTHEAPFV 934
+ GA I++ G +H+A + ++++L + +
Sbjct: 144 FEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA 183
>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional.
Length = 682
Score = 67.8 bits (165), Expect = 2e-11
Identities = 84/359 (23%), Positives = 155/359 (43%), Gaps = 54/359 (15%)
Query: 535 IKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHL 594
+ + +++LE GAD N++D+ +P+HYAA RG+ ++ LLL GA +N+ + + L
Sbjct: 158 LLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLEC 217
Query: 595 ATNNGHETCVKAL------IYFNEQEVLN-----------------LNINAVNNQGDSPL 631
A ++ + +KA+ I N+ +L ++N++++ ++PL
Sbjct: 218 AVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPL 277
Query: 632 HAAARW-GYTSIIQLLLDHGANPTLENKRKVTPL-------QNANNLHVAKLLNAYVHKP 683
H A++ + ++ LL+ GA+ +N + TPL + N+ +L A V+
Sbjct: 278 HHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAA 337
Query: 684 KPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQL 743
LY P T D+ D +NVN R+ K
Sbjct: 338 DRLYI---------TPLHQASTLDRNKDIVITLLELGANVNARD--------YCDKTPIH 380
Query: 744 FALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINIC 803
+A + NN + +I + + + A C + S + + D N+N
Sbjct: 381 YAAVRNN-VVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMS-VKTLIDRGANVNSK 438
Query: 804 NSDGYTALHIATSLG-HYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLL 861
N D T LH A D++ +L++ AD+N + ++ PL IA + + IV +LL
Sbjct: 439 NKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAIN-IQNQYPLLIALEYH--GIVNILL 494
Score = 52.4 bits (125), Expect = 1e-06
Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 798 LNINICNSDGYTALHIATSLGHYDL--VRLLINYRADINIVTRVKQLTPLHIAC---QNN 852
++N N G T L++ G YD +R LI AD+N R+ +TPLH A +N
Sbjct: 298 ADVNAKNIKGETPLYLMAKNG-YDTENIRTLIMLGADVNAADRL-YITPLHQASTLDRNK 355
Query: 853 NLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCL 912
++ I L L A NVNA+DY T +HYAA+ N+ + LL GA + + T L
Sbjct: 356 DIVITLLELGA---NVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTAL 412
Query: 913 HMA 915
H A
Sbjct: 413 HFA 415
Score = 42.7 bits (100), Expect = 8e-04
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 12/147 (8%)
Query: 524 TVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYA--ATRGHQNVLLLLLHSGASI 581
T +H AA+ + +++ +L+ GAD + + LH+A T + +V L+ GA++
Sbjct: 377 TPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSV-KTLIDRGANV 435
Query: 582 NLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTS 641
N + + +T LH A + V ++ N +V NA+N Q PL A Y
Sbjct: 436 NSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADV-----NAINIQNQYPLLIAL--EYHG 488
Query: 642 IIQLLLDHGANPTLENKRKVTPLQNAN 668
I+ +LL +GA L + R + N N
Sbjct: 489 IVNILLHYGAE--LRDSRVLHKSLNDN 513
Score = 38.5 bits (89), Expect = 0.017
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 713 SDVNEANISNVNVRE-GVRPRNITEIKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNA 771
+DVN + +++V E V +NI IK + + I N++ L+K+ + NE+
Sbjct: 202 ADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKA---IRNED------ 252
Query: 772 CHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYD-LVRLLINYR 830
+E+ S + D ++N + T LH A+ LV L+
Sbjct: 253 --------------LET-SLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERG 297
Query: 831 ADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAA-INNHTN 889
AD+N +K TPL++ +N + L +VNA D T LH A+ ++ + +
Sbjct: 298 ADVN-AKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKD 356
Query: 890 LATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
+ LL+ GA +++ +T +H A ++ ++ L
Sbjct: 357 IVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTL 394
Score = 34.3 bits (78), Expect = 0.32
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 850 QNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQ 909
Q + L I +LL +VNA+D T +HYAA + + LLL GA I
Sbjct: 154 QQDELLIAEMLLE-GGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDL 212
Query: 910 TCLHMAQQMTSLSLVRVL 927
+ L A ++ ++ +
Sbjct: 213 SVLECAVDSKNIDTIKAI 230
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies).
Length = 54
Score = 58.4 bits (142), Expect = 4e-11
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 557 SPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALI 608
+ LH AA G ++ LL G IN TD +GNTALH+A NG+ +K L+
Sbjct: 3 TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 55.7 bits (135), Expect = 4e-10
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 522 GFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLL 575
G T LH AA+ GR+++V +LE G D N D G + LH AA G+ VL LLL
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 55.3 bits (134), Expect = 6e-10
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 841 QLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLL 895
T LH A + L +V+ LL K ++N D GNTALH AA N + + LLL
Sbjct: 1 GRTALHKAAISGRLELVKYLLE-KGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 54.2 bits (131), Expect = 2e-09
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 807 GYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLL 861
G TALH A G +LV+ L+ DIN T LHIA +N NL +++LLL
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDE-DGNTALHIAAENGNLEVLKLLL 54
Score = 46.1 bits (110), Expect = 1e-06
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 875 GNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
G TALH AAI+ L LL+ G + G T LH+A + +L ++++L
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLL 53
Score = 45.3 bits (108), Expect = 2e-06
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 588 GNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLL 647
G TALH A +G VK L+ ++IN + G++ LH AA G +++LLL
Sbjct: 1 GRTALHKAAISGRLELVKYLLE------KGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 42.6 bits (101), Expect = 2e-05
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 627 GDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLL 676
G + LH AA G +++ LL+ G + ++ T L A NL V KLL
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLL 53
Score = 38.0 bits (89), Expect = 7e-04
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 798 LNINICNSDGYTALHIATSLGHYDLVRLLI 827
++IN + DG TALHIA G+ ++++LL+
Sbjct: 25 VDINRTDEDGNTALHIAAENGNLEVLKLLL 54
>gnl|CDD|216928 pfam02204, VPS9, Vacuolar sorting protein 9 (VPS9) domain.
Length = 104
Score = 59.5 bits (145), Expect = 6e-11
Identities = 24/104 (23%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 300 PRARSEISHIDCYSTILGKIGCVRRCISAISKEDTRDKLQGNIITVDDLLPMIVFLVVKC 359
+A+ E+ ++ + K+ C+ R I+ E G + DDLLP+++++++K
Sbjct: 2 EKAQEELKKLNEAKSPREKLKCLLRTCKLIT-EALSKSNPGEPLGADDLLPILIYVLIKA 60
Query: 360 ALPNWIAHLTYMKQFHFSQSSNVCIDQDSFLITSLEASIEHIKS 403
PN ++L ++ F + ++ ++ + +T+LEA++E I++
Sbjct: 61 NPPNLYSNLQFISLF---RDPDLLSGEEGYYLTTLEAALEFIEN 101
>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel;
Provisional.
Length = 823
Score = 64.9 bits (158), Expect = 1e-10
Identities = 44/157 (28%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 523 FTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASIN 582
+L VA+ G +++ +L+ D + D G +PLH AA++G+++ +L+LL +++
Sbjct: 527 SNLLTVAST-GNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVH 585
Query: 583 LTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSI 642
+ D GNTAL A + H + L +F +I+ + GD L AA+ +
Sbjct: 586 IRDANGNTALWNAISAKHHKIFRILYHFA-------SISDPHAAGDL-LCTAAKRNDLTA 637
Query: 643 IQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLL 676
++ LL G N E+ + T LQ A +++ + +LL
Sbjct: 638 MKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLL 674
Score = 50.6 bits (121), Expect = 4e-06
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 41/161 (25%)
Query: 798 LNINICNSDGYTALHIATSLGHYDLVRLLINYRADIN----------------------- 834
L+ +I +S G T LHIA S G+ D V +L+ + +++
Sbjct: 549 LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFR 608
Query: 835 IVTRVKQLTPLHI-------ACQNNNLSIVRLLLAAKQ-CNVNAQDYRGNTALHYAAINN 886
I+ ++ H A + N+L+ ++ LL KQ NV+++D++G TAL A +
Sbjct: 609 ILYHFASISDPHAAGDLLCTAAKRNDLTAMKELL--KQGLNVDSEDHQGATALQVAMAED 666
Query: 887 HTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
H ++ LL+ +GA + + L +L
Sbjct: 667 HVDMVRLLIMNGA--------DVDKANTDDDFSPTELRELL 699
Score = 48.3 bits (115), Expect = 2e-05
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSG 578
D +G T LH+AA G V ++L+ + + +D G + L A + H + +L H
Sbjct: 555 DSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFA 614
Query: 579 ASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWG 638
+ + + L A T +K L+ LN+++ ++QG + L A
Sbjct: 615 SISD--PHAAGDLLCTAAKRNDLTAMKELLK------QGLNVDSEDHQGATALQVAMAED 666
Query: 639 YTSIIQLLLDHGANPTLEN 657
+ +++LL+ +GA+ N
Sbjct: 667 HVDMVRLLIMNGADVDKAN 685
Score = 36.8 bits (85), Expect = 0.067
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 845 LHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIK 904
L +A N + LL A ++ D +G T LH AA + + +LLK I+
Sbjct: 530 LTVASTGNAALLEELLKAKLDPDIG--DSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR 587
Query: 905 NHYGQTCLHMAQQMTSLSLVRVLTHEA 931
+ G T L A + R+L H A
Sbjct: 588 DANGNTALWNAISAKHHKIFRILYHFA 614
>gnl|CDD|140343 PTZ00322, PTZ00322,
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase;
Provisional.
Length = 664
Score = 64.5 bits (157), Expect = 2e-10
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 538 VDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATN 597
++L GAD N +D G +PLH A GH V+ +LL GA L D +G T L LA
Sbjct: 98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157
Query: 598 NGHETCVKALIYFNEQEVLNLNINAV--------NNQGDSPLHAAA 635
NG V+ L + Q L NA + DSP+ +
Sbjct: 158 NGFREVVQLLSRHS-QCHFELGANAKPDSFTGKPPSLEDSPISSHH 202
Score = 54.5 bits (131), Expect = 2e-07
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 736 EIKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACH----PLCQCAKCKEDVVESESR 791
EI +++ +E E K L+ EE + H LCQ A + V +R
Sbjct: 43 EIARIDTHLEALEATENKDATPDHNLTTEEVIDPVVAHMLTVELCQLAASGDAV---GAR 99
Query: 792 PVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQN 851
+ + N + DG T LHIA + GH +VR+L+ + AD ++ + + TPL +A +N
Sbjct: 100 ILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGK-TPLELAEEN 158
Query: 852 NNLSIVRLLLAAKQCNVNA 870
+V+LL QC+
Sbjct: 159 GFREVVQLLSRHSQCHFEL 177
Score = 43.3 bits (102), Expect = 6e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 857 VRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQ 916
R+LL + N +DY G T LH A N H + +LL+ GA P + + G+T L +A+
Sbjct: 98 ARILLTGG-ADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAE 156
Query: 917 QMTSLSLVRVL 927
+ +V++L
Sbjct: 157 ENGFREVVQLL 167
Score = 42.2 bits (99), Expect = 0.001
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 621 NAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLLN 677
N + G +PLH A G+ ++++LL+ GA+PTL +K TPL+ A V +LL+
Sbjct: 109 NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168
Query: 678 AYVHKPKPLYNYLVPKEKVSRPPS 701
+ L P +PPS
Sbjct: 169 RHSQCHFELGANAKPDSFTGKPPS 192
>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies).
Length = 56
Score = 56.6 bits (137), Expect = 2e-10
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 540 LVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLA 595
L+ D N+ D G +PLH AA G ++ LL G +NL D++G TAL LA
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 52.4 bits (126), Expect = 6e-09
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 860 LLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA 915
LL ++NA D GNT LH AA L LLK G +++ G T L +A
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 50.4 bits (121), Expect = 3e-08
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 826 LINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYA 882
L+ + T TPLH+A + L +V+ LL ++N +D G TAL A
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLL-KPGVDLNLRDSDGLTALDLA 56
Score = 44.7 bits (106), Expect = 3e-06
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 573 LLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLH 632
LL H +N TD GNT LHLA G V+ L+ +++N ++ G + L
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLL------KPGVDLNLRDSDGLTALD 54
Query: 633 AA 634
A
Sbjct: 55 LA 56
Score = 43.9 bits (104), Expect = 8e-06
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYA 562
D G T LH+AA YG +++V +L+ G D N +D G + L A
Sbjct: 13 DGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 42.3 bits (100), Expect = 2e-05
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIA 848
++N + +G T LH+A G +LV+ L+ D+N+ T L +A
Sbjct: 8 DLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGL-TALDLA 56
Score = 42.0 bits (99), Expect = 3e-05
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 617 NLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA 667
+++NA + G++PLH AA++G ++Q LL G + L + +T L A
Sbjct: 6 PIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional.
Length = 477
Score = 62.2 bits (151), Expect = 7e-10
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 821 DLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALH 880
++ +LL++Y ADIN+ R K T LH A +N + + LLL + NVN D N+ LH
Sbjct: 148 EITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLL-SYGANVNIPDKTNNSPLH 206
Query: 881 YAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA 915
+A + + + +LL++GA ++ G T LH++
Sbjct: 207 HAVKHYNKPIVHILLENGASTDARDKCGNTPLHIS 241
Score = 62.2 bits (151), Expect = 7e-10
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 520 DRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGA 579
+G T LH A ++ +L+L GA+ N D SPLH+A ++ ++ +LL +GA
Sbjct: 166 HKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGA 225
Query: 580 SINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQ----GDSPLHAAA 635
S + D GNT LH++ V ++ ++L + VN + G + LH++
Sbjct: 226 STDARDKCGNTPLHIS--------VGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSI 277
Query: 636 RWGYTSIIQLLLDHGANPTLENKRKVTPLQNA 667
+ ++LLL++GA+ N K+TPL +A
Sbjct: 278 K--SERKLKLLLEYGADINSLNSYKLTPLSSA 307
Score = 45.3 bits (107), Expect = 1e-04
Identities = 71/337 (21%), Positives = 129/337 (38%), Gaps = 40/337 (11%)
Query: 601 ETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRK 660
ET +K + Y + E + + + + PLH A +++ LL G N + R
Sbjct: 14 ETILKYIEYIDHTENYSTSASLIPF---IPLHQAVEARNLDVVKSLLTRGHNVNQPDHRD 70
Query: 661 VTPLQNA----NNLHVAKLLNAYVHKPKPLYNYLVPKEK-------------VSRPPSPP 703
+TPL N L + +++ + K Y + K+ +R +
Sbjct: 71 LTPLHIICKEPNKLGMKEMIRSIN-KCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQ 129
Query: 704 PTQDKYL---DYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEIKLIKSYFG 760
Y+ D+ EA I+ + + G K L EN + +L +
Sbjct: 130 TIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLS 189
Query: 761 LSNEEKVPDNA-CHPLCQCAK-CKEDVVESESRPVTDECLNINICNSDGYTALHIATS-L 817
+PD PL K + +V + + + + + G T LHI+
Sbjct: 190 YGANVNIPDKTNNSPLHHAVKHYNKPIVHI----LLENGASTDARDKCGNTPLHISVGYC 245
Query: 818 GHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNT 877
YD+++LL+ + D+N + + LT LH + ++ ++LLL ++N+ + T
Sbjct: 246 KDYDILKLLLEHGVDVNAKSYILGLTALHSSIKSER--KLKLLLEYG-ADINSLNSYKLT 302
Query: 878 AL-----HYAAINNHTNLAT-LLLKSGARPQIKNHYG 908
L Y IN L + + L +P IKN G
Sbjct: 303 PLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEG 339
Score = 39.9 bits (93), Expect = 0.005
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 856 IVRLLLAAKQCNVNAQD-YRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHM 914
I +LLL+ ++N +D ++GNTALHYA N L LLL GA I + + LH
Sbjct: 149 ITKLLLS-YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHH 207
Query: 915 AQQMTSLSLVRVL 927
A + + +V +L
Sbjct: 208 AVKHYNKPIVHIL 220
Score = 29.8 bits (67), Expect = 8.5
Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 29/165 (17%)
Query: 548 TNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKAL 607
+ S L PLH A + +V+ LL G ++N D+ T LH+ ++ +K +
Sbjct: 30 STSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEM 89
Query: 608 I-------YFNEQEVLN-------------LNINAVNNQGDSPLHAAARWGY-----TSI 642
I F + + N N L + I
Sbjct: 90 IRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEI 149
Query: 643 IQLLLDHGANPTLENKRKV-TPLQNAN---NLHVAKLLNAYVHKP 683
+LLL +GA+ ++++ K T L A + + +LL +Y
Sbjct: 150 TKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV 194
>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional.
Length = 154
Score = 53.3 bits (128), Expect = 3e-08
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 804 NSDGYTALHIATSLGHYD---LVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLL 860
N G +HI ++ D ++LL+ + ADIN RV TPLHIA N + L
Sbjct: 52 NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWL 111
Query: 861 LAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGAR 900
N+ +Y T + A + + +L GA+
Sbjct: 112 CNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQ 151
>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional.
Length = 413
Score = 55.0 bits (132), Expect = 1e-07
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 442 LKVYNKYNNYKKISSLTKLFEFARLGDGDKVRAILQEEN------KKEDSESLPLCHPLC 495
L + + K ++L + GD V +L K+ L L L
Sbjct: 54 LMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILK 113
Query: 496 SCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCG 555
D + I P T D+ F+ LH+A + G IK ++L+++ A + +D CG
Sbjct: 114 KLDIMKLLIARGADPDIPNT----DK-FSPLHLAVMMGDIKGIELLIDHKACLDIEDCCG 168
Query: 556 CSPLHYAATRGHQNVLLLLLHSGASINLTDNEGN-TALHLATNNGHETCVKALI 608
C+PL A +G + +LL SGA+I+ G AL A N V+ I
Sbjct: 169 CTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFI 222
Score = 50.4 bits (120), Expect = 3e-06
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 526 LHVAALYGRIKVVDLVLELGA---DTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASIN 582
LH A G +K V+ +L+LG D +D G +PLH A +++ LL+ GA +
Sbjct: 72 LHDAVEEGDVKAVEELLDLGKFADDVFYKD--GMTPLHLATILKKLDIMKLLIARGADPD 129
Query: 583 LTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSI 642
+ + + + LHLA G ++ LI + + L++ + G +PL A G +I
Sbjct: 130 IPNTDKFSPLHLAVMMGDIKGIELLI--DHKACLDIE----DCCGCTPLIIAMAKGDIAI 183
Query: 643 IQLLLDHGANPTLENKR 659
++LLD GAN K
Sbjct: 184 CKMLLDSGANIDYFGKN 200
Score = 49.2 bits (117), Expect = 6e-06
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 801 NICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLL 860
+I N+D ++ LH+A +G + LLI+++A ++I TPL IA +++I ++L
Sbjct: 129 DIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI-EDCCGCTPLIIAMAKGDIAICKML 187
Query: 861 LAAKQCNVNAQDYRGN-TALHYAAINNHTNLATLLLKSGARPQI 903
L + N++ G AL YA NN ++ L +K GA I
Sbjct: 188 LDSG-ANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI 230
Score = 48.1 bits (114), Expect = 2e-05
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Query: 522 GFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASI 581
G + + +A + + + L+++ GA + + S LH A G + LL G
Sbjct: 35 GISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFA 94
Query: 582 N-LTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYT 640
+ + +G T LHLAT +K LI + + N SPLH A G
Sbjct: 95 DDVFYKDGMTPLHLATILKKLDIMKLLIARGA------DPDIPNTDKFSPLHLAVMMGDI 148
Query: 641 SIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLL 676
I+LL+DH A +E+ TPL A ++ + K+L
Sbjct: 149 KGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKML 187
Score = 47.3 bits (112), Expect = 2e-05
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 791 RPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQ 850
R + D +N N DG + + +A + ++LL+ + A + V + LH A +
Sbjct: 19 RRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPD-VKYPDIESELHDAVE 77
Query: 851 NNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQT 910
++ V LL + + G T LH A I ++ LL+ GA P I N +
Sbjct: 78 EGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFS 137
Query: 911 CLHMAQQMTSLSLVRVL 927
LH+A M + + +L
Sbjct: 138 PLHLAVMMGDIKGIELL 154
Score = 46.1 bits (109), Expect = 7e-05
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 811 LHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNA 870
LH A G V L++ + V +TPLH+A L I++LL+A + +
Sbjct: 72 LHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG-ADPDI 130
Query: 871 QDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
+ + LH A + LL+ A I++ G T L +A +++ ++L
Sbjct: 131 PNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKML 187
Score = 42.3 bits (99), Expect = 0.001
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 529 AALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEG 588
A L+G + + +L++G + N + G SP+ A + LL+ GA ++ +
Sbjct: 9 AILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDI 68
Query: 589 NTALHLATNNGHETCVKALIYFNEQEVLNLNINAV-NNQGDSPLHAAARWGYTSIIQLLL 647
+ LH A G V+ L+ L + V G +PLH A I++LL+
Sbjct: 69 ESELHDAVEEGDVKAVEELL------DLGKFADDVFYKDGMTPLHLATILKKLDIMKLLI 122
Query: 648 DHGANPTLENKRKVTPLQNA 667
GA+P + N K +PL A
Sbjct: 123 ARGADPDIPNTDKFSPLHLA 142
Score = 41.9 bits (98), Expect = 0.001
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 797 CLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSI 856
CL+I C G T L IA + G + ++L++ A+I+ + + L A +NN + I
Sbjct: 160 CLDIEDCC--GCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDI 217
Query: 857 VRLLLA-AKQCNV 868
VRL + CN+
Sbjct: 218 VRLFIKRGADCNI 230
>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities. Repeats 13-24 are especially active,
with known sites of interaction for the Na/K ATPase,
Cl/HCO(3) anion exchanger, voltage-gated sodium channel,
clathrin heavy chain and L1 family cell adhesion
molecules. The ANK repeats are found to form a
contiguous spiral stack such that ion transporters like
the anion exchanger associate in a large central cavity
formed by the ANK repeat spiral, while clathrin and cell
adhesion molecules associate with specific regions
outside this cavity.
Length = 33
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 806 DGYTALHIATSLGHYDLVRLLINYRADINIVTR 838
DG T LH+A GH ++V+LL+ AD+N +
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 46.4 bits (111), Expect = 6e-07
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 626 QGDSPLHAAARWGYTSIIQLLLDHGANPTLENK 658
G++PLH AAR G+ +++LLL+ GA+ +K
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 44.1 bits (105), Expect = 3e-06
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 555 GCSPLHYAATRGHQNVLLLLLHSGASINLTDN 586
G +PLH AA GH V+ LLL +GA +N D
Sbjct: 2 GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 43.3 bits (103), Expect = 5e-06
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 875 GNTALHYAAINNHTNLATLLLKSGARPQIKNH 906
GNT LH AA N H + LLL++GA ++
Sbjct: 2 GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 42.5 bits (101), Expect = 1e-05
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 843 TPLHIACQNNNLSIVRLLLAAKQCNVNAQD 872
TPLH+A +N +L +V+LLL A +VNA+D
Sbjct: 4 TPLHLAARNGHLEVVKLLLEAG-ADVNARD 32
Score = 40.2 bits (95), Expect = 7e-05
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 522 GFTVLHVAALYGRIKVVDLVLELGADTNSQD 552
G T LH+AA G ++VV L+LE GAD N++D
Sbjct: 2 GNTPLHLAARNGHLEVVKLLLEAGADVNARD 32
Score = 36.0 bits (84), Expect = 0.003
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 587 EGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNN 625
+GNT LHLA NGH VK L+ ++NA +
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGA------DVNARDK 33
>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities.
Length = 30
Score = 42.6 bits (101), Expect = 9e-06
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 806 DGYTALHIATSLGHYDLVRLLINYRADINI 835
DG T LH+A G+ +LV+LL+ + ADIN
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 35.3 bits (82), Expect = 0.004
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 522 GFTVLHVAALYGRIKVVDLVLELGADTN 549
G T LH+AA G +++V L+LE GAD N
Sbjct: 2 GNTPLHLAARNGNLELVKLLLEHGADIN 29
Score = 35.3 bits (82), Expect = 0.004
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 627 GDSPLHAAARWGYTSIIQLLLDHGANP 653
G++PLH AAR G +++LLL+HGA+
Sbjct: 2 GNTPLHLAARNGNLELVKLLLEHGADI 28
Score = 32.2 bits (74), Expect = 0.043
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 843 TPLHIACQNNNLSIVRLLLAAKQCNVNA 870
TPLH+A +N NL +V+LLL ++NA
Sbjct: 4 TPLHLAARNGNLELVKLLLEHG-ADINA 30
Score = 31.8 bits (73), Expect = 0.070
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 875 GNTALHYAAINNHTNLATLLLKSGA 899
GNT LH AA N + L LLL+ GA
Sbjct: 2 GNTPLHLAARNGNLELVKLLLEHGA 26
Score = 30.3 bits (69), Expect = 0.22
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 554 CGCSPLHYAATRGHQNVLLLLLHSGASIN 582
G +PLH AA G+ ++ LLL GA IN
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADIN 29
Score = 28.4 bits (64), Expect = 1.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 587 EGNTALHLATNNGHETCVKALI 608
+GNT LHLA NG+ VK L+
Sbjct: 1 DGNTPLHLAARNGNLELVKLLL 22
>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel
protein. The Transient Receptor Potential Ca2+ Channel
(TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also
been called the store-operated calcium channel (SOC)
family. The prototypical members include the Drosophila
retinal proteinsTRP and TRPL (Montell and Rubin, 1989;
Hardie and Minke, 1993). SOC members of the family
mediate the entry of extracellular Ca2+ into cells in
responseto depletion of intracellular Ca2+ stores
(Clapham, 1996) and agonist stimulated production of
inositol-1,4,5 trisphosphate (IP3). One member of the
TRP-CCfamily, mammalian Htrp3, has been shown to form a
tight complex with the IP3 receptor (TC #1.A.3.2.1).
This interaction is apparently required for IP3
tostimulate Ca2+ release via Htrp3. The vanilloid
receptor subtype 1 (VR1), which is the receptor for
capsaicin (the ?hot? ingredient in chili peppers) and
servesas a heat-activated ion channel in the pain
pathway (Caterina et al., 1997), is also a member of
this family. The stretch-inhibitable non-selective
cation channel(SIC) is identical to the vanilloid
receptor throughout all of its first 700 residues, but
it exhibits a different sequence in its last 100
residues. VR1 and SICtransport monovalent cations as
well as Ca2+. VR1 is about 10x more permeable to Ca2+
than to monovalent ions. Ca2+ overload probably causes
cell deathafter chronic exposure to capsaicin.
(McCleskey and Gold, 1999) [Transport and binding
proteins, Cations and iron carrying compounds].
Length = 743
Score = 48.2 bits (115), Expect = 2e-05
Identities = 66/283 (23%), Positives = 103/283 (36%), Gaps = 50/283 (17%)
Query: 408 GPSEPEALMSYDDQEELANAKFKPTVEMSDLTTQLKVYNKYNNYKKIS-------SLTKL 460
GP + +E F P E DL + VY KK++ + L
Sbjct: 2 GPLDIVPAEESPLSDE--EKAFLPAAERGDLAS---VYRDLEEPKKLNINCPDRLGRSAL 56
Query: 461 FEFARLGDGDKVRAILQEENKK-EDSESLPLCHPLCSCDDCEEAINLK---HSQSKPTTQ 516
F A + ++ +L + + ++L L D E + +S P
Sbjct: 57 FVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLEL 116
Query: 517 SMDD------RGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGC-------------- 556
+ D G T LH+AA ++V L+LE GA ++
Sbjct: 117 ANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPAR--ACGDFFVKSQGVDSFYH 174
Query: 557 --SPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLAT-NNGHETCVKALIYFNEQ 613
SPL+ AA G +++ LL A I D+ GNT LHL N + + L
Sbjct: 175 GESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYN 234
Query: 614 EVLNLNINA---------VNNQGDSPLHAAARWGYTSIIQLLL 647
L+L +N+QG +PL AA+ G + +L L
Sbjct: 235 FALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKL 277
Score = 43.9 bits (104), Expect = 4e-04
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 14/93 (15%)
Query: 807 GYTALHIATSLGHYDLVRLLINYRADINI-----VTRVKQLT--------PLHIACQNNN 853
G TALH+A +Y++V+LL+ A + Q PL+ A +
Sbjct: 128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS 187
Query: 854 LSIVRLLLAAKQCNVNAQDYRGNTALHYAAINN 886
SIV LL ++ D GNT LH + N
Sbjct: 188 PSIVALLSE-DPADILTADSLGNTLLHLLVMEN 219
Score = 41.2 bits (97), Expect = 0.003
Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 44/162 (27%)
Query: 784 DVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLT 843
+E+E+ +T+ LN++ + G T LH SL + D V ++ + K
Sbjct: 59 AAIENENLELTELLLNLSCRGAVGDTLLHAI-SLEYVDAVEAILLHLLAA----FRKSGP 113
Query: 844 PLHIACQNNNLSIVRLLLAAKQCNVNAQD----YRGNTALHYAAINNHTNLATLLLKSGA 899
N Q G TALH AA + + LLL+ GA
Sbjct: 114 LEL---------------------ANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGA 152
Query: 900 RPQIKNH--------------YGQTCLHMAQQMTSLSLVRVL 927
+ +G++ L+ A + S S+V +L
Sbjct: 153 SVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALL 194
Score = 35.8 bits (83), Expect = 0.13
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 29/120 (24%)
Query: 559 LHYAATRGHQNVLLLLLHSGASINLTDN-------------EGNTALHLATNNGHETCVK 605
LH + V +LLH A+ + G TALHLA + + VK
Sbjct: 86 LHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVK 145
Query: 606 ALIYFNEQEVLNLNINAVNNQ------------GDSPLHAAARWGYTSIIQLLLDHGANP 653
L+ + ++ A + G+SPL+AAA G SI+ LL + A+
Sbjct: 146 LLL----ERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI 201
Score = 34.3 bits (79), Expect = 0.40
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 848 ACQNNNLSIV-RLLLAAKQCNVNAQDYRGNTALHYAAI-NNHTNLATLLLKSGARPQIKN 905
A + +L+ V R L K+ N+N D G +AL AAI N + L LLL R +
Sbjct: 24 AAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAV-- 81
Query: 906 HYGQTCLHMAQQMTSLSLVRVL 927
G T LH SL V +
Sbjct: 82 --GDTLLHAI----SLEYVDAV 97
Score = 32.0 bits (73), Expect = 1.7
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 12/112 (10%)
Query: 549 NSQDLCGCSPLHYAATRG-HQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKAL 607
N D G S L AA + + LLL+ G+T LH + + L
Sbjct: 46 NCPDRLGRSALFVAAIENENLELTELLLNLSCRGA----VGDTLLHAISLEYVDAVEAIL 101
Query: 608 IYFNEQEVLNLNINAVNNQ-------GDSPLHAAARWGYTSIIQLLLDHGAN 652
++ + + N+Q G + LH AA I++LLL+ GA+
Sbjct: 102 LHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGAS 153
>gnl|CDD|197603 smart00248, ANK, ankyrin repeats. Ankyrin repeats are about 33
amino acids long and occur in at least four consecutive
copies. They are involved in protein-protein
interactions. The core of the repeat seems to be an
helix-loop-helix structure.
Length = 30
Score = 39.9 bits (94), Expect = 9e-05
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 806 DGYTALHIATSLGHYDLVRLLINYRADINI 835
DG T LH+A G+ ++V+LL++ ADIN
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 37.2 bits (87), Expect = 9e-04
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 626 QGDSPLHAAARWGYTSIIQLLLDHGANPTL 655
G +PLH AA G +++LLLD GA+
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 36.4 bits (85), Expect = 0.002
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 555 GCSPLHYAATRGHQNVLLLLLHSGASINL 583
G +PLH AA G+ V+ LLL GA IN
Sbjct: 2 GRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 33.3 bits (77), Expect = 0.020
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 874 RGNTALHYAAINNHTNLATLLLKSGA 899
G T LH AA N + + LLL GA
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGA 26
Score = 33.3 bits (77), Expect = 0.021
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 521 RGFTVLHVAALYGRIKVVDLVLELGADTN 549
G T LH+AA G ++VV L+L+ GAD N
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29
Score = 32.2 bits (74), Expect = 0.045
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 843 TPLHIACQNNNLSIVRLLL 861
TPLH+A +N NL +V+LLL
Sbjct: 4 TPLHLAAENGNLEVVKLLL 22
Score = 31.0 bits (71), Expect = 0.13
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 587 EGNTALHLATNNGHETCVKALI 608
+G T LHLA NG+ VK L+
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLL 22
>gnl|CDD|165108 PHA02741, PHA02741, hypothetical protein; Provisional.
Length = 169
Score = 42.0 bits (98), Expect = 4e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 516 QSMDDRGFTVLHVAAL----YGRIKVVDLVLELGADTNSQD-LCGCSPLHYAAT-RGHQN 569
+ DD G +H+AA +++D ++ELGAD N+Q+ L G + LH AA R H
Sbjct: 54 NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDL 113
Query: 570 VLLLLLHSGASINLTDNEGNTALHLATNN 598
L G ++ + + + LA +N
Sbjct: 114 AEWLCCQPGIDLHFCNADNKSPFELAIDN 142
Score = 32.7 bits (74), Expect = 0.45
Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 800 INICNSDGYTALHIA--TSLGHY--DLVRLLINYRADINIVTRVKQLTPLHIACQNNNLS 855
+N + G +HIA +++ LI ADIN ++ T LH+A +
Sbjct: 53 LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHD 112
Query: 856 IVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLK 896
+ L +++ + + A N + +L +
Sbjct: 113 LAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILRE 153
>gnl|CDD|128469 smart00167, VPS9, Domain present in VPS9. Domain present in yeast
vacuolar sorting protein 9 and other proteins.
Length = 117
Score = 40.5 bits (95), Expect = 5e-04
Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 299 VPRARSEISHIDCYSTILGKIGCVRRCISAI--SKEDTRDKLQGNIITVDDLLPMIVFLV 356
V + E+ + Y + KI C+ R I E ++ G DD LP++++++
Sbjct: 2 VEIEQIELKFLQLYKSPSDKIKCLLRACKLIYTLLETQSGEVAGA----DDFLPVLIYVI 57
Query: 357 VKCALPNWIAHLTYMKQFHFSQSSNVCIDQDSFLITSLEASIEHIKS 403
+KC + + + YM++F ++ + + +TSL A++ IK
Sbjct: 58 IKCDPRDLLLNAEYMEEF---LEPSLLTGEGGYYLTSLSAALALIKG 101
>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional.
Length = 300
Score = 41.5 bits (97), Expect = 0.001
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 16/142 (11%)
Query: 531 LYGRIK-----VVDLVLELGADTNSQ----DLCGCSPLHYAATRGHQNVLLLLLHSGASI 581
LY IK ++D +L+LGAD + + +PL YA + + LL+ GA +
Sbjct: 37 LYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV 96
Query: 582 NLTDNEGN-TALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYT 640
N E T L+++ +G C++ L+ + +IN N +P+ A
Sbjct: 97 NRYAEEAKITPLYISVLHGCLKCLEILLSYGA------DINIQTNDMVTPIELALMICNN 150
Query: 641 SIIQLLLDHGANPTLENKRKVT 662
+ ++ D+ + ++ +K+
Sbjct: 151 FLAFMICDNEISNFYKHPKKIL 172
Score = 35.3 bits (81), Expect = 0.13
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 809 TALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNV 868
L A + D +LLI Y AD+N ++TPL+I+ + L + +LL+ ++
Sbjct: 72 NPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGA-DI 130
Query: 869 NAQDYRGNTALHYAAINNHTNLATLL 894
N Q T + A + + LA ++
Sbjct: 131 NIQTNDMVTPIELALMICNNFLAFMI 156
>gnl|CDD|165154 PHA02791, PHA02791, ankyrin-like protein; Provisional.
Length = 284
Score = 40.4 bits (94), Expect = 0.003
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 506 LKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATR 565
LK S D G + L+ A +++V +L GA N L PLH AAT
Sbjct: 14 LKSFLSSKDAFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNL--LENEFPLHQAATL 71
Query: 566 GHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFN 611
++ +LL SG + D++GNTAL+ A ++G+ VK + N
Sbjct: 72 EDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKN 117
Score = 38.1 bits (88), Expect = 0.014
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 807 GYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQC 866
G++AL+ A + + LV L+N A N++ + PLH A + IV++LL +
Sbjct: 30 GHSALYYAIADNNVRLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFSGMD 86
Query: 867 NVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYG-QTCLHMAQQMTSLSLVR 925
+ D +GNTAL+YA + + L +K R G +T + A + +S+V
Sbjct: 87 DSQFDD-KGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVS 145
Query: 926 VLTHEAP 932
E P
Sbjct: 146 YFLSEIP 152
Score = 29.6 bits (66), Expect = 8.0
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 872 DYRGNTALHYAAINNHTNLATLLLKSGA-RPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
D G++AL+YA +N+ L LL +GA + ++N + LH A + +V++L
Sbjct: 27 DVHGHSALYYAIADNNVRLVCTLLNAGALKNLLENEFP---LHQAATLEDTKIVKIL 80
>gnl|CDD|165231 PHA02917, PHA02917, ankyrin-like protein; Provisional.
Length = 661
Score = 39.6 bits (92), Expect = 0.008
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 867 NVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA-QQMTSLSLVR 925
++N D RG T LH A N +L +LLL+SG+ I+++ G TC+ +A + ++ L++
Sbjct: 444 DINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLK 503
Query: 926 VLTHEAP 932
+L P
Sbjct: 504 MLLCHKP 510
Score = 34.6 bits (79), Expect = 0.28
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 535 IKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHL 594
+ +++ L D N D G + LH A Q+++ LLL SG+ +N+ N G T + +
Sbjct: 432 LSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAI 491
Query: 595 ATN 597
A N
Sbjct: 492 AIN 494
Score = 33.4 bits (76), Expect = 0.70
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 619 NINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVT----PLQNANNLHVAK 674
+IN ++ +G++ LH A R+ S++ LLL+ G++ + + T + + N+ + K
Sbjct: 444 DINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLK 503
Query: 675 LLNAYVHKP 683
+L HKP
Sbjct: 504 ML--LCHKP 510
Score = 31.9 bits (72), Expect = 1.7
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 518 MDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCG--CSPLHYAATRGHQNVLLLLL 575
+D RG T+LH A Y + +V L+LE G+D N + G C + +R + + +LL
Sbjct: 448 IDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLC 507
Query: 576 H 576
H
Sbjct: 508 H 508
Score = 30.4 bits (68), Expect = 5.3
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 642 IIQLLLDHGANPTLENKRKVTPLQNANN 669
+++LLLD G NP +N R++TPL+ N
Sbjct: 50 VVKLLLDSGTNPLHKNWRQLTPLEEYTN 77
>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional.
Length = 446
Score = 38.1 bits (88), Expect = 0.018
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 18/191 (9%)
Query: 483 EDSESLPLCHPLCSCDDCEEAI--NLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDL 540
E S + + H C +E L H P DD G LH+A+ ++V +
Sbjct: 33 EPSGNYHILHAYCGIKGLDERFVEELLHRGYSP--NETDDDGNYPLHIASKINNNRIVAM 90
Query: 541 VLELGADTNSQDLCGCSPLHYAATRGHQNV--LLLLLHSGASINLTDNEGNTALHLATNN 598
+L GAD N+ D +PL+Y + + + + LL+ GA IN + +E LA +
Sbjct: 91 LLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTD 150
Query: 599 GHETCVKAL--IYFNEQEVLNLNINAVNNQ--GDSPLHAAARWGYTSIIQLLLDHGANPT 654
E K + I F + V N ++ D+P + W ++ G +P+
Sbjct: 151 PSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISW--------MMKLGISPS 202
Query: 655 LENKRKVTPLQ 665
+ TPL
Sbjct: 203 KPDHDGNTPLH 213
Score = 33.5 bits (76), Expect = 0.55
Identities = 57/265 (21%), Positives = 103/265 (38%), Gaps = 38/265 (14%)
Query: 422 EELANAKFKPTVEMSDLTTQLKVYNKYNNYKKISSL---------------TKLFEFARL 466
EEL + + P D L + +K NN + ++ L T L+ +
Sbjct: 56 EELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGT 115
Query: 467 GDG--DKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFT 524
D +++ ++Q K +S C PL +C D E + K + +D G
Sbjct: 116 DDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKN 175
Query: 525 VLHVAALYGRIK--VVDLVLELGADTNSQDLCGCSPLHYAATRGHQNV-LLLLLHSGASI 581
+H + K + +++LG + D G +PLH ++ +NV ++ LL +
Sbjct: 176 HIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPSTDV 235
Query: 582 NLTDNEGNTALHL----------------ATNNGHETCVKALIYFNEQEVLNLNINAVNN 625
N + G++ L L +N + V I+++ +VL + IN
Sbjct: 236 NKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEI-INDKGK 294
Query: 626 QGDSP-LHAAARWGYTSIIQLLLDH 649
Q DS A G ++ LLD+
Sbjct: 295 QYDSTDFKMAVEVGSIRCVKYLLDN 319
>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional.
Length = 209
Score = 35.6 bits (82), Expect = 0.078
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 821 DLVRLLINYRADINIVTRVKQLTPLHIAC---QNNNLSIVRLLLAAKQCNVNAQDYRGNT 877
++++ LI AD+N TR L+ LH +N I+++L+ + ++ +D G
Sbjct: 67 EILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGS-SITEEDEDGKN 125
Query: 878 ALH--YAAINNHTNLATLLLKSGARPQIKNHYGQTCLH 913
LH N N+ LL+ SG K+ L+
Sbjct: 126 LLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILY 163
Score = 32.9 bits (75), Expect = 0.52
Identities = 21/122 (17%), Positives = 51/122 (41%), Gaps = 22/122 (18%)
Query: 520 DRGFTVLHVAALYGR---IKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQN--VLLLL 574
D + LH + + +++ ++++ G+ +D G + LH + V+ LL
Sbjct: 85 DNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLL 144
Query: 575 LHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLN------LNINAVNNQGD 628
+ SG S D + N L+ +++ +++++ + ++IN N G
Sbjct: 145 IDSGVSFLNKDFDNNNILY-----------SYILFHSDKKIFDFLTSLGIDINETNKSGY 193
Query: 629 SP 630
+
Sbjct: 194 NC 195
Score = 29.4 bits (66), Expect = 6.3
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 532 YGRIKVVDLVLELGADTNSQDLC-GCSPLHYAATRG---HQNVLLLLLHSGASINLTDNE 587
++++ ++E GAD N + S LH+ + +L +L+ SG+SI D +
Sbjct: 63 KVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDED 122
Query: 588 GNTALHLATNN 598
G LH+ N
Sbjct: 123 GKNLLHMYMCN 133
>gnl|CDD|222925 PHA02743, PHA02743, Viral ankyrin protein; Provisional.
Length = 166
Score = 34.8 bits (80), Expect = 0.081
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 519 DDRGFTVLHVAALYGR---IKVVDLVLELGADTNSQDL-CGCSPLHYAA-TRGHQNVLLL 573
D G H+ A Y R + ++L++ +GAD N+++L G + LH AA T+ ++ L
Sbjct: 54 DHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWL 113
Query: 574 LLHSGASINLTDNEGNTALHLA 595
G ++ + + TA H+A
Sbjct: 114 CRQLGVNLGAINYQHETAYHIA 135
Score = 32.5 bits (74), Expect = 0.52
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 573 LLLHSGASINLTD-NEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPL 631
LL++ GA IN + GNT LH+A + + + L L +N+ A+N Q ++
Sbjct: 78 LLVNMGADINARELGTGNTLLHIAASTKNYELAEWLC-----RQLGVNLGAINYQHETAY 132
Query: 632 HAAARWGYTSIIQLLLDHGA 651
H A + ++++L +GA
Sbjct: 133 HIAYKMRDRRMMEILRANGA 152
Score = 29.0 bits (65), Expect = 7.7
Identities = 24/77 (31%), Positives = 33/77 (42%)
Query: 823 VRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYA 882
+ LL+N ADIN T LHIA N + L N+ A +Y+ TA H A
Sbjct: 76 IELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIA 135
Query: 883 AINNHTNLATLLLKSGA 899
+ +L +GA
Sbjct: 136 YKMRDRRMMEILRANGA 152
>gnl|CDD|165089 PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provisional.
Length = 764
Score = 34.1 bits (78), Expect = 0.38
Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 33/172 (19%)
Query: 503 AINLKHSQSKPTTQSMDDRGFT----VLHV---AALYGRIKVVDLVLELGADTNSQDLCG 555
N+ + +S+D +LH A I VV L+ G + +D G
Sbjct: 258 IDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAG 317
Query: 556 CSPLHYAATRGH--QNVLLLLLHSGASINLTDNEGNTALHL--------------ATNNG 599
+ LH R + +++ LL G +N DN GNT LH N+
Sbjct: 318 RTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDI 377
Query: 600 HETCVKALIYFNEQEVLNLNINAVNNQGDSPLHA----AARWGYTSIIQLLL 647
++ LI L +I AVN G +PL + A + Y II L+
Sbjct: 378 RLDVIQCLIS------LGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLI 423
>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional.
Length = 489
Score = 33.7 bits (77), Expect = 0.44
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 535 IKVVDLVLELGADTNSQDLCGCSPL-----HYAATRGHQNVLLLLLHSGASINLTDNEGN 589
+V L + LGA+ N D +PL + + +++ +L+ +GA IN +++G
Sbjct: 51 TDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGE 110
Query: 590 TALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYT---SIIQLL 646
T L+ +NG+ ++ L++ E + ++ G + L + + II+LL
Sbjct: 111 TPLYCLLSNGYINNLEILLFMIENGA---DTTLLDKDGFTMLQVYLQSNHHIDIEIIKLL 167
Query: 647 LDHGAN-PTLENKRKVTPL 664
L+ G + T NK K L
Sbjct: 168 LEKGVDINTHNNKEKYDTL 186
Score = 32.1 bits (73), Expect = 1.6
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 537 VVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLAT 596
++D + D N D G +PL+Y+ + ++ + LL G IN+ GNT L A
Sbjct: 241 ILDFIFSY-IDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAF 299
Query: 597 NN 598
N
Sbjct: 300 EN 301
Score = 31.7 bits (72), Expect = 2.0
Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 45/162 (27%)
Query: 799 NINICNSDGYTALHIATSLGHY---DLVRLLINYRADINIVTRVKQLTPLHIACQNN--- 852
+ + + DG+T L + H+ ++++LL+ DIN ++ LH + N
Sbjct: 137 DTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDR 196
Query: 853 -NLSIVRLL--------------------------------------LAAKQCNVNAQDY 873
+ I++L ++N D
Sbjct: 197 IDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDE 256
Query: 874 RGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA 915
G L+Y+ +N+ + LL+ G I G TCL A
Sbjct: 257 LGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTA 298
>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional.
Length = 494
Score = 33.2 bits (76), Expect = 0.75
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 535 IKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHL 594
KV++ +L+ N +D G +PL +A + LL G I +G+T L
Sbjct: 237 FKVLNFILKY-IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTY 295
Query: 595 ATNNGHETCV 604
A +G+ +
Sbjct: 296 AIKHGNIDML 305
Score = 32.0 bits (73), Expect = 1.6
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 15/119 (12%)
Query: 821 DLVRLLINYRADINIVTRVKQLTPLHIACQNNNLS------IVRLLLAAKQCNVNAQDYR 874
+V+LLI+ AD+N ++ TPL +N ++ IV+LLL ++N + +
Sbjct: 51 KIVKLLIDNGADVNYKGYIE--TPLCAVLRNREITSNKIKKIVKLLLKFG-ADINLKTFN 107
Query: 875 GNTA----LHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQ--MTSLSLVRVL 927
G + ++ + INN L LL K +KN G LHM + ++++L
Sbjct: 108 GVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKIL 166
Score = 31.6 bits (72), Expect = 2.1
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 798 LNIN-ICNSDGYTALHI--ATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQN--N 852
+N+N + NS GY LH+ + D++++L+++ ++ T + LTP++I +N +
Sbjct: 135 INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDID 194
Query: 853 NLSI-VRLLLAAKQCNVNAQDYRGNTAL 879
+SI V L K N+ + + L
Sbjct: 195 VISIKVIKYLIKKGVNIETNNNGSESVL 222
Score = 30.1 bits (68), Expect = 7.2
Identities = 69/334 (20%), Positives = 124/334 (37%), Gaps = 74/334 (22%)
Query: 568 QNVLLLLLHSGASINLT-DNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQ 626
+N L LL +G +N L+L + VK LI N VN +
Sbjct: 16 KNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLID---------NGADVNYK 66
Query: 627 G--DSPLHAAARWGYTS------IIQLLLDHGANPTLENKRKVTPL------QNANNLHV 672
G ++PL A R + I++LLL GA+ L+ V+P+ N NN +
Sbjct: 67 GYIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDM 126
Query: 673 AKLL---NAYVHKPKPL--YNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVRE 727
+ L V+ K YN L YL+ V + ++ + +
Sbjct: 127 LRFLLSKGINVNDVKNSRGYNLL----------------HMYLESFSVKK-DVIKILLSF 169
Query: 728 GVRPRNITEIKKVEQLFALIENN----EIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKE 783
GV T + + + + N+ IK+IK + + + N E
Sbjct: 170 GVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIK--YLIKKGVNIETN--------NNGSE 219
Query: 784 DVVES---ESRPVTDECLNI----------NICNSDGYTALHIATSLGHYDLVRLLINYR 830
V+ES ++ ++ + + N + G+ L I+ + +Y+ L+
Sbjct: 220 SVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLG 279
Query: 831 ADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAK 864
DI V++ T L A ++ N+ ++ +L K
Sbjct: 280 DDIYNVSK-DGDTVLTYAIKHGNIDMLNRILQLK 312
Score = 29.7 bits (67), Expect = 9.2
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 536 KVVDLVLELGADTNSQDLCGCSPLH---YAATRGHQNVLLLLLHSGASIN-LTDNEGNTA 591
K+V L+L+ GAD N + G SP+ Y + + ++L LL G ++N + ++ G
Sbjct: 89 KIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNL 148
Query: 592 LHL 594
LH+
Sbjct: 149 LHM 151
>gnl|CDD|217957 pfam04196, Bunya_RdRp, Bunyavirus RNA dependent RNA polymerase.
The bunyaviruses are enveloped viruses with a genome
consisting of 3 ssRNA segments (called L, M and S). The
nucleocapsid protein is encode on the small (S) genomic
RNA. The L segment codes for an RNA polymerase. This
family contains the RNA dependent RNA polymerase on the
L segment.
Length = 735
Score = 32.4 bits (74), Expect = 1.3
Identities = 32/212 (15%), Positives = 63/212 (29%), Gaps = 24/212 (11%)
Query: 33 EDLSENIFFKALKTEHGELFEKATQDGWIICIPRVCSLPKYALTYEDFFNHI-LIPSEEL 91
E ++ F+ L K ++ ++ L + + L
Sbjct: 111 EQNNKTPFYSKLTLSGLNDDWKGIKNSGVLPSITSSVLYTLKSLISNVYLGFYLKNKGLH 170
Query: 92 PETHFRTLNDQEIRICNRIISIEADGGSTFSTQILFEETYYTDEMLK------YKVLCID 145
E + ++ +I+ E + +E+ D + K LC
Sbjct: 171 GEVN------VLAKLLKKILEWERKFREKEPKYLGYEDPVNGDIKVHLLSESYLKDLCRH 224
Query: 146 NPLDINLENTND--ASISNIQTLRDCIDLLWTESKGKEIFEKMDEAIKMFLLTNDQFEYN 203
L + LE A I+ + TL LL K + +A+ F + Y
Sbjct: 225 ALLRLRLEYQEGFCAPITELSTLESSKLLLERIEKSAVL-----KALSNF----SKHWYE 275
Query: 204 PFDKQKYLVEKLYQNCLNICLKDNKLRQSISI 235
P + +L + L + + L + I
Sbjct: 276 PKGSDLRNISELKEMSLEVGEDNYHLSKVIET 307
>gnl|CDD|237615 PRK14121, PRK14121, tRNA (guanine-N(7)-)-methyltransferase;
Provisional.
Length = 390
Score = 31.1 bits (71), Expect = 2.8
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 688 NYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANI--SNVNVREGVRPRNITEIKKVEQLFA 745
+L+ +K +RP + +S++ A+I N+ I ++
Sbjct: 57 GFLIKGDKATRPSKVGILKKALKIFSELFCADIISHNLAENSKKLSLKKPYILDIDNFLD 116
Query: 746 LI-ENNEIKLIKSYFG 760
I +N E LI+ FG
Sbjct: 117 FISKNQEKILIEIGFG 132
>gnl|CDD|224497 COG1581, Ssh10b, Archaeal DNA-binding protein [Transcription].
Length = 91
Score = 28.9 bits (65), Expect = 2.8
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 245 LAVETYMHHGIYKTLIK--GITACTALEDAQFNKMIRN--LSDIQLKDLDIREDLYDTVP 300
LAV T + G + +IK G A++ A+ ++RN + D+Q+KD+ I + +
Sbjct: 19 LAVLTQFNEGADEVIIKARGRAISKAVDVAE---IVRNRFIPDVQIKDIKIGTEELEGED 75
Query: 301 RARSEISHI 309
+S I
Sbjct: 76 GRTRNVSTI 84
>gnl|CDD|182227 PRK10079, PRK10079, phosphonate metabolism transcriptional
regulator PhnF; Provisional.
Length = 241
Score = 30.5 bits (69), Expect = 3.1
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 8/49 (16%)
Query: 628 DSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLL 676
D PL+A AR+ Q LLD G++PT E + ++ L+ A+ HVA L
Sbjct: 81 DYPLNAQARFS-----QNLLDQGSHPTSE--KLLSVLRPASG-HVADAL 121
>gnl|CDD|182360 PRK10293, PRK10293, acyl-CoA esterase; Provisional.
Length = 136
Score = 29.6 bits (66), Expect = 3.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 22/72 (30%)
Query: 574 LLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVN----NQGD- 628
LLH GAS+ L ++ G+ A +L T EQ+V+ L INA + +G
Sbjct: 52 LLHGGASVVLAESIGSVAGYLCTE-------------GEQKVVGLEINANHVRSAREGRV 98
Query: 629 ----SPLHAAAR 636
PLH +R
Sbjct: 99 RGVCKPLHLGSR 110
>gnl|CDD|188760 cd09374, LIM2_Isl, The second LIM domain of Isl, a member of LHX
protein family. The second LIM domain of Isl: Isl is a
member of LHX protein family, which features two tandem
N-terminal LIM domains and a C-terminal DNA binding
homeodomain. Isl1 and Isl2 are the two conserved members
of this family. Proteins in this group are found in the
nucleus and act as transcription factors or cofactors.
LHX proteins are critical for the development of
specialized cells in multiple tissue types, including
the nervous system, skeletal muscle, the heart, the
kidneys, and endocrine organs, such as the pituitary
gland and the pancreas. Isl-1 is one of the LHX proteins
isolated originally by virtue of its ability to bind DNA
sequences from the 5'-flanking region of the rat insulin
gene in pancreatic insulin-producing cells. Mice
deficient in Isl-1 fail to form the dorsal exocrine
pancreas and islet cells fail to differentiate. On the
other hand, Isl-1 takes part in the pituitary
development by activating the gonadotropin-releasing
hormone receptor gene together with LHX3 and
steroidogenic factor 1. Mouse Isl2 is expressed in the
retinal ganglion cells and the developing spinal cord
where it plays a role in motor neuron development. Same
as Isl1, Isl2 may also be able to bind to the insulin
gene enhancer to promote gene activation. All LIM
domains are 50-60 amino acids in size and share two
characteristic zinc finger motifs. The two zinc fingers
contain eight conserved residues, mostly cysteines and
histidines, which coordinately bond to two zinc atoms.
LIM domains function as adaptors or scaffolds to support
the assembly of multimeric protein complexes.
Length = 55
Score = 27.8 bits (62), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Query: 297 DTVPRARSEISHIDCYSTILGKIGCVRRCI 326
D V RAR++I HI+C+ C R+ I
Sbjct: 12 DFVMRARTKIYHIECFRCSA----CSRQLI 37
>gnl|CDD|227663 COG5369, COG5369, Uncharacterized conserved protein [Function
unknown].
Length = 743
Score = 30.7 bits (69), Expect = 4.1
Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 11/147 (7%)
Query: 104 IRICNRIISIEADGGSTFSTQILFEETYYTDEMLKYKVLCIDNPLDINLENTNDASI--- 160
I + ++ + D S +L Y + K+K L ++ L TND
Sbjct: 475 IDVLVNLVMSKDDALQANSEWVLRHLMYNCQKNEKFKFLA-KIGVEKVLSYTNDPCFKVQ 533
Query: 161 -SNIQTLRDCIDLLWTESKGKEIFEKMDEAIKMFLLTNDQFEY-NPFDKQKYLVEKLYQN 218
+Q LR+ K K++F K +F D++E NP + E Y
Sbjct: 534 HQVLQILRNFTCDTSKNEKSKDVFIKATPRRYLFKRLIDKYEENNPMEIL----EGCY-I 588
Query: 219 CLNICLKDNKLRQSISINKYLIDSIKL 245
+ D+ L + + ++DSI
Sbjct: 589 LVRNAACDDTLDYIVQSQEDMLDSIFE 615
>gnl|CDD|130543 TIGR01478, STEVOR, variant surface antigen, stevor family. This
model represents the stevor branch of the rifin/stevor
family (pfam02009) of predicted variant surface antigens
as found in Plasmodium falciparum. This model is based
on a set of stevor sequences kindly provided by Matt
Berriman from the Sanger Center. This is a global model
and assesses a penalty for incomplete sequence.
Additional fragmentary sequences may be found with the
fragment model and a cutoff of 8 bits.
Length = 295
Score = 30.2 bits (68), Expect = 4.8
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 136 MLKYKVLCIDNPLDINLENTNDASISNIQTLRDCIDLL-----WTESKGKEIFEKMD-EA 189
+L V C + +++ N S L I + + KEI +K++ EA
Sbjct: 12 LLSQNVNCHNKKYNVSYIQNNTQMTSTKSRLLAEIQRPKNPHYHNDPELKEIIDKLNEEA 71
Query: 190 IKMFLLTNDQFEYNPFDKQKYLVEK 214
IK + T+D P+++ + LVEK
Sbjct: 72 IKKYQETHD-----PYEQLQELVEK 91
>gnl|CDD|235845 PRK06647, PRK06647, DNA polymerase III subunits gamma and tau;
Validated.
Length = 563
Score = 30.1 bits (68), Expect = 6.5
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 25/92 (27%)
Query: 181 EIFEKMDEAIKMFLLTNDQFEYNPFDKQKYLVEKLYQNCLN------ICLKDNKLRQSIS 234
+I KM LT D+F +EKL + LN +C+ D+ +S
Sbjct: 236 QIRSKMG-------LTGDEF-----------LEKLASSILNEDAKELLCVLDSVFLSGVS 277
Query: 235 INKYLIDSIKLAVET-YMHHGIYKTLIKGITA 265
+ ++L+D I+ E ++ HGI GI A
Sbjct: 278 VEQFLLDCIEFFRELLFLKHGIKNEAFIGIKA 309
>gnl|CDD|113452 pfam04684, BAF1_ABF1, BAF1 / ABF1 chromatin reorganising factor.
ABF1 is a sequence-specific DNA binding protein involved
in transcription activation, gene silencing and
initiation of DNA replication. ABF1 is known to remodel
chromatin, and it is proposed that it mediates its
effects on transcription and gene expression by
modifying local chromatin architecture. These functions
require a conserved stretch of 20 amino acids in the
C-terminal region of ABF1 (amino acids 639 to 662 S.
cerevisiae). The N-terminal two thirds of the protein
are necessary for DNA binding, and the N-terminus (amino
acids 9 to 91 in S. cerevisiae) is thought to contain a
novel zinc-finger motif which may stabilise the protein
structure.
Length = 508
Score = 30.1 bits (67), Expect = 6.5
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 839 VKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTN------LAT 892
V ++ P H +NLS+ R +L+ K + D + + L + N+ N +A
Sbjct: 170 VTKIEPYHNHPLESNLSLQRFVLS-KIPKILQVDLKFDAILE-SLCNDDDNTVAKFRVAQ 227
Query: 893 LLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVLTHEAPFVLK 936
+ +SG IK YG T M ++M S RV T +A FVLK
Sbjct: 228 YVEESGIIDIIKQRYGLTDAEMDKKMLSNIARRVTTDKARFVLK 271
>gnl|CDD|204376 pfam10017, DUF2260, Uncharacterized conserved protein (DUF2260).
This domain, found in various hypothetical bacterial
proteins, has no known function.
Length = 125
Score = 28.6 bits (65), Expect = 6.5
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
Query: 93 ETHFRTLNDQEIRICNRIISIEADGGSTFSTQILFEETY-YTDEMLK 138
E H + DQ +R+ I A G T I E +Y YT E +
Sbjct: 60 EMHLVSRRDQTVRLGGETIHFAA--GET----IHTENSYKYTLEDFR 100
>gnl|CDD|165157 PHA02795, PHA02795, ankyrin-like protein; Provisional.
Length = 437
Score = 30.0 bits (67), Expect = 7.3
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 535 IKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHL 594
+++ L + D N D G + L+ A G+ +++ LL +GA++N + G T L +
Sbjct: 201 LEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDV 260
Query: 595 ATNNG 599
A + G
Sbjct: 261 AVDRG 265
>gnl|CDD|227942 COG5655, COG5655, Plasmid rolling circle replication initiator
protein and truncated derivatives [DNA replication,
recombination, and repair].
Length = 256
Score = 29.1 bits (65), Expect = 9.0
Identities = 23/138 (16%), Positives = 43/138 (31%), Gaps = 3/138 (2%)
Query: 126 LFEETYYTDEMLKYKVLCIDNPLDINLENTNDASISNIQTLRDCIDLLWTESKGKEIFEK 185
++ Y ++ Y L L +NL+N D + N +L + K+I +
Sbjct: 95 DLQDGLYVKRVISYGPLLKWKHLKLNLKNVEDGDLLNK-SLDEMALGFKRTMGFKKIAKN 153
Query: 186 MDEAIKMFLLT--NDQFEYNPFDKQKYLVEKLYQNCLNICLKDNKLRQSISINKYLIDSI 243
+K +T YN + E+ Y + S L
Sbjct: 154 FVGFMKSTEITYNEKDNSYNQHMHVLFCSEQTYFKNFINNTPQEFWNKRWSKAMKLDYDP 213
Query: 244 KLAVETYMHHGIYKTLIK 261
++ M+ K I+
Sbjct: 214 QVMKLWTMYKKEIKNYIQ 231
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.318 0.134 0.394
Gapped
Lambda K H
0.267 0.0786 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 46,205,187
Number of extensions: 4506189
Number of successful extensions: 4015
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3761
Number of HSP's successfully gapped: 204
Length of query: 936
Length of database: 10,937,602
Length adjustment: 106
Effective length of query: 830
Effective length of database: 6,236,078
Effective search space: 5175944740
Effective search space used: 5175944740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (28.3 bits)