RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8454
(936 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 193 bits (490), Expect = 1e-54
Identities = 111/435 (25%), Positives = 173/435 (39%), Gaps = 85/435 (19%)
Query: 524 TVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINL 583
T LHVA+ G + +V +L+ GA N ++ +PLH AA GH V LL + A +N
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61
Query: 584 TDNEGNTALHLATNNGHETCVKALI---------------------------YFNEQEVL 616
+ T LH A GH VK L+
Sbjct: 62 KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121
Query: 617 NLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVA 673
+ + +G +PLH AA++G + +LLL+ A+P K +TPL A NNL +
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181
Query: 674 KLLNAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRN 733
KLL + +
Sbjct: 182 KLLLP-------------------------------------RGGSPHSPAWNGYTPLHI 204
Query: 734 ITEIKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCK-EDVVESESRP 792
+ +VE +L++ +S G PL A+ ++V
Sbjct: 205 AAKQNQVEVARSLLQYGGSANAESVQG-----------VTPLHLAAQEGHAEMVA----L 249
Query: 793 VTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNN 852
+ + N N+ N G T LH+ GH + +LI + ++ TR+ TPLH+A
Sbjct: 250 LLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY-TPLHVASHYG 308
Query: 853 NLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCL 912
N+ +V+ L Q +VNA+ G + LH AA HT++ TLLLK+GA P + G T L
Sbjct: 309 NIKLVK-FLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPL 367
Query: 913 HMAQQMTSLSLVRVL 927
+A+++ +S+ VL
Sbjct: 368 AIAKRLGYISVTDVL 382
Score = 108 bits (270), Expect = 1e-25
Identities = 89/389 (22%), Positives = 144/389 (37%), Gaps = 56/389 (14%)
Query: 450 NYKKISSLTKLFEFARLGDGDKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAINLKHS 509
N K T L AR+G + V+ +L+ + + + + L
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALL 119
Query: 510 QSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQN 569
+ + + M +GFT LHVAA YG+++V +L+LE A N+ G +PLH A + +
Sbjct: 120 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLD 179
Query: 570 VLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDS 629
++ LLL G S + G T LH+A ++L+ + NA + QG +
Sbjct: 180 IVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS------ANAESVQGVT 233
Query: 630 PLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNY 689
PLH AA+ G+ ++ LLL AN L NK +TP L P+ +
Sbjct: 234 PLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTP-----------LHLVAQEGHVPVADV 282
Query: 690 LVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIEN 749
L+ + GV T + A
Sbjct: 283 LI----------------------------------KHGVMVDATTRMGYTPLHVASHYG 308
Query: 750 NEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCK-EDVVESESRPVTDECLNINICNSDGY 808
N + ++ PL Q A+ D+V + + N +SDG
Sbjct: 309 NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTL----LLKNGASPNEVSSDGT 364
Query: 809 TALHIATSLGHYDLVRLLINYRADINIVT 837
T L IA LG+ + +L + + V
Sbjct: 365 TPLAIAKRLGYISVTDVLKVVTDETSFVL 393
Score = 104 bits (259), Expect = 3e-24
Identities = 70/309 (22%), Positives = 109/309 (35%), Gaps = 58/309 (18%)
Query: 630 PLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLLNAYVHKPKPL 686
PLH A+ G+ I++ LL GA+P + N + TPL A + VAK L
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYL---------- 52
Query: 687 YNYLVPKEKVSRPPSPPPTQDKYLDY-SDVNEANISNVNVREGVRPRNITEIKKVEQLFA 745
L + VN ++ P L
Sbjct: 53 -----------------------LQNKAKVNAKA------KDDQTP-----------LHC 72
Query: 746 LIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNS 805
++K L N + + ++ +
Sbjct: 73 AARIGHTNMVK--LLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTK 130
Query: 806 DGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQ 865
G+T LH+A G + LL+ A N + LTPLH+A +NNL IV+LL +
Sbjct: 131 KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGK-NGLTPLHVAVHHNNLDIVKLL-LPRG 188
Query: 866 CNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVR 925
+ ++ + G T LH AA N +A LL+ G ++ G T LH+A Q +V
Sbjct: 189 GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVA 248
Query: 926 VLTHEAPFV 934
+L +
Sbjct: 249 LLLSKQANG 257
Score = 92.3 bits (228), Expect = 2e-20
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 842 LTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARP 901
LTPLH+A +L IV+ LL + N + + T LH AA HT +A LL++ A+
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 59
Query: 902 QIKNHYGQTCLHMAQQMTSLSLVRVL 927
K QT LH A ++ ++V++L
Sbjct: 60 NAKAKDDQTPLHCAARIGHTNMVKLL 85
>d2ot3a1 a.222.1.1 (A:139-387) Rab5 GDP/GTP exchange factor
(Rabex-5) {Human (Homo sapiens), gamma isoform [TaxId:
9606]}
Length = 249
Score = 115 bits (288), Expect = 3e-29
Identities = 47/261 (18%), Positives = 108/261 (41%), Gaps = 24/261 (9%)
Query: 167 RDCIDLLWT-ESKGKEIFEKMDEAIKMFLLTNDQFEYNPFDKQKYLVEKLYQNCLNICLK 225
++ I+ L T G+EI+++ ++ + + + + ++Q + Y N
Sbjct: 2 KEFIEFLKTFHKTGQEIYKQTKLFLEGM---HYKRDLSI-EEQSECAQDFYHNVAE---- 53
Query: 226 DNKLRQSISINKYLIDSIKLAVETYMHHGIYKTLIKGITACTALEDAQFNKMIRNLSDIQ 285
+++ + ++ I +E Y+ +YK + T +D K IR L +
Sbjct: 54 --RMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALRWVT 111
Query: 286 LKDLDIRED-----LYDTVPRARSEISHIDCYSTILGKIGCVRRCISAISKEDTRDKLQG 340
+ L + + + D V +A ++I +D K+ C+ +C I + +
Sbjct: 112 PQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF--NAIKITKN 169
Query: 341 NIITVDDLLPMIVFLVVKCALPNWIAHLTYMKQFHFSQSSNVCIDQDSFLITSLEASIEH 400
+ DD LP ++++V+K P +++ Y+ F S + +D + T+L ++
Sbjct: 170 EPASADDFLPTLIYIVLKGNPPRLQSNIQYIT--RFCNPSRLMTGEDGYYFTNLCCAVAF 227
Query: 401 IK----SGLLIGPSEPEALMS 417
I+ L + + + MS
Sbjct: 228 IEKLDAQSLNLSQEDFDRYMS 248
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 108 bits (269), Expect = 2e-26
Identities = 55/289 (19%), Positives = 99/289 (34%), Gaps = 18/289 (6%)
Query: 626 QGDSPLHAAARWGYTSIIQLLLDHGANPTLE-NKRKVTPLQNA---NNLHVAKLLNAYVH 681
+ + L A + ++Q LL+ GAN + + TPL NA + + +LL +
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 682 KPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVE 741
P ++ +L
Sbjct: 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 742 QLFALIENNEIKLIKSYFGLSNEEKVPDNACHPL-CQCAKCKEDVVESESRPVTDECLNI 800
N + K +E++ L K +V++ + + ++
Sbjct: 124 LYKRGANVNLRRKTKED-----QERLRKGGATALMDAAEKGHVEVLK---ILLDEMGADV 175
Query: 801 NICNSDGYTALHIATSLGHY----DLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSI 856
N C++ G AL A + LL+++ AD+N+ + TPL +A + +L +
Sbjct: 176 NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK-TPLILAVEKKHLGL 234
Query: 857 VRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKN 905
V+ LL + +N D G TAL A +A LL K GA +
Sbjct: 235 VQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 107 bits (268), Expect = 3e-26
Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 10/172 (5%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVL-ELGADTN 549
A ++K + + G T L AA G ++V+ ++L E+GAD N
Sbjct: 117 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 176
Query: 550 SQDLCG----CSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVK 605
+ D G L + + + LLL GA +N+ G T L LA H V+
Sbjct: 177 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQ 236
Query: 606 ALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLEN 657
L+ E ++ IN ++ G + L A I +LL GA+ +
Sbjct: 237 RLL-----EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 107 bits (267), Expect = 3e-26
Identities = 57/321 (17%), Positives = 94/321 (29%), Gaps = 49/321 (15%)
Query: 557 SPLHYAATRGHQNVLLLLLHSGASINLTDNE-GNTALHLATNNGHETCVKALIYFNEQEV 615
L A +++ LL GA++N + E G T LH A E V+ L+
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-- 64
Query: 616 LNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKL 675
G +P AA G +++L L GA+ + T A K
Sbjct: 65 ----PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120
Query: 676 LNAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNIT 735
L + + KE + G
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQ-------------------------ERLRKGGATA---- 151
Query: 736 EIKKVEQLFALIENNEIKLIK---SYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRP 792
L E ++++K G + + VE+ +
Sbjct: 152 -------LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHL 204
Query: 793 VTDECLNINICNSDGYTALHIATSLGHYDLVRLLI-NYRADINIVTRVKQLTPLHIACQN 851
+ D ++N+ G T L +A H LV+ L+ +IN T L +A +
Sbjct: 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALLLAVEL 263
Query: 852 NNLSIVRLLLAAKQCNVNAQD 872
I LL + + D
Sbjct: 264 KLKKIAELLCKRG-ASTDCGD 283
Score = 98.1 bits (243), Expect = 5e-23
Identities = 54/243 (22%), Positives = 92/243 (37%), Gaps = 17/243 (6%)
Query: 449 NNYKKISSLTKLFEFARLGDGDKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAINLKH 508
N ++ T L ++ D V +L+ + L + +
Sbjct: 32 NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLF 91
Query: 509 SQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLC----------GCSP 558
D GFT AA+YG++K + + + GA+ N + G +
Sbjct: 92 LSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 151
Query: 559 LHYAATRGHQNVL-LLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLN 617
L AA +GH VL +LL GA +N DN G AL A + ++ V+A+ +
Sbjct: 152 LMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH--G 209
Query: 618 LNINAVNNQGDSPLHAAARWGYTSIIQLLLDH-GANPTLENKRKVTPLQNA---NNLHVA 673
++N +G +PL A + ++Q LL+ + T L A +A
Sbjct: 210 ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA 269
Query: 674 KLL 676
+LL
Sbjct: 270 ELL 272
Score = 71.5 bits (174), Expect = 4e-14
Identities = 39/198 (19%), Positives = 80/198 (40%), Gaps = 15/198 (7%)
Query: 743 LFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINI 802
L ++ + +++ + + A + + ++N
Sbjct: 43 LHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGS--VKLLKLFLSKGADVNE 100
Query: 803 CNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQ---------LTPLHIACQNNN 853
C+ G+TA A G ++ L A++N+ + K+ T L A + +
Sbjct: 101 CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 160
Query: 854 LSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTN----LATLLLKSGARPQIKNHYGQ 909
+ ++++LL +VNA D G AL +A +++ + + LLL GA ++ G+
Sbjct: 161 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK 220
Query: 910 TCLHMAQQMTSLSLVRVL 927
T L +A + L LV+ L
Sbjct: 221 TPLILAVEKKHLGLVQRL 238
Score = 71.1 bits (173), Expect = 5e-14
Identities = 40/181 (22%), Positives = 67/181 (37%), Gaps = 41/181 (22%)
Query: 517 SMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQD-LCGCSPLHYAATRGHQNVLLLLL 575
+++D +L A + +V +LE GA+ N Q+ G +PLH A ++++ LLL
Sbjct: 2 AVEDN--HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59
Query: 576 H---------------------------------SGASINLTDNEGNTALHLATNNGHET 602
GA +N D G TA A G
Sbjct: 60 RHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVK 119
Query: 603 CVKALI----YFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDH-GANPTLEN 657
+K L N + + + G + L AA G+ ++++LLD GA+ +
Sbjct: 120 ALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACD 179
Query: 658 K 658
Sbjct: 180 N 180
Score = 70.0 bits (170), Expect = 1e-13
Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 6/147 (4%)
Query: 445 YNKYNNYKKISSLTKLFEFARLGDGDKVRAILQEEN-----KKEDSESLPLCHPLCSCDD 499
+ + T L + A G + ++ +L E + + L S D
Sbjct: 137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDS 196
Query: 500 CEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLEL-GADTNSQDLCGCSP 558
EAI +RG T L +A + +V +LE + N D G +
Sbjct: 197 DVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTA 256
Query: 559 LHYAATRGHQNVLLLLLHSGASINLTD 585
L A + + LL GAS + D
Sbjct: 257 LLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 68.8 bits (167), Expect = 3e-13
Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 1/119 (0%)
Query: 806 DGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQ 865
+ L A DLV+ L+ A++N TPLH A Q + IV LLL
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 866 CNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLV 924
V + AAI L L L GA + YG T A + +
Sbjct: 64 DPVLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKAL 121
Score = 67.3 bits (163), Expect = 1e-12
Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 29/240 (12%)
Query: 458 TKLFEFARLGDGDKVRAILQE----ENKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKP 513
L + + D D V+ +L+ ++E+ PL + + E I +
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHN---AVQMSREDIVELLLRHGA 63
Query: 514 TTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLL 573
G T +AA+ G +K++ L L GAD N D G + AA G L
Sbjct: 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 574 LLHSGASINLTD----------NEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAV 623
L GA++NL G TAL A GH +K L+ + + ++NA
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL-----DEMGADVNAC 178
Query: 624 NNQGDSPLH----AAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLL 676
+N G + L ++ +I LLLDHGA+ + +R TPL A +L + + L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238
Score = 50.3 bits (119), Expect = 4e-07
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 13/145 (8%)
Query: 799 NINICNSD-GYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIV 857
N+N + G+T LH A + D+V LL+ + AD + + L A + +
Sbjct: 30 NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLK 89
Query: 858 RLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHY---------- 907
+K +VN D+ G TA AA+ L K GA ++
Sbjct: 90 L--FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKG 147
Query: 908 GQTCLHMAQQMTSLSLVRVLTHEAP 932
G T L A + + ++++L E
Sbjct: 148 GATALMDAAEKGHVEVLKILLDEMG 172
Score = 44.2 bits (103), Expect = 4e-05
Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Query: 480 NKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVD 539
N + + PL + Q D G T L +A K+ +
Sbjct: 213 NVRGERGKTPLIL--AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270
Query: 540 LVLELGADTNSQDL 553
L+ + GA T+ DL
Sbjct: 271 LLCKRGASTDCGDL 284
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 100 bits (249), Expect = 2e-24
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 15/223 (6%)
Query: 460 LFEFARLGDGDKVRAILQEE----NKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTT 515
+ A G ++++ + + + + L +C I Q
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHW---ACSAGHTEIVEFLLQLGVPV 63
Query: 516 QSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLL 575
DD G++ LH+AA GR ++V +L GA N+ + GC+PLHYAA++ + ++LL
Sbjct: 64 NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
Query: 576 HSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAA 635
GA+ + D+ TA+H A G+ + L+Y+ N + +G++PLH A
Sbjct: 124 EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAS------TNIQDTEGNTPLHLAC 177
Query: 636 RWGYTSIIQLLLDHGANPTLENKRKVTPLQNA--NNLHVAKLL 676
+LL+ GA+ +ENK + TPLQ A + K +
Sbjct: 178 DEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRM 220
Score = 86.6 bits (213), Expect = 1e-19
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 7/191 (3%)
Query: 458 TKLFEFARLGDGDKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTTQS 517
T L G + V +LQ D + + + I +
Sbjct: 39 TALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNA 98
Query: 518 MDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHS 577
++ G T LH AA R ++ ++LE GA+ +++D + +H AA +G+ ++ +LL+
Sbjct: 99 VNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYY 158
Query: 578 GASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARW 637
AS N+ D EGNT LHLA + K L+ +I N + +PL A
Sbjct: 159 KASTNIQDTEGNTPLHLACDEERVEEAKLLVSQ------GASIYIENKEEKTPLQVAKG- 211
Query: 638 GYTSIIQLLLD 648
G I++ +++
Sbjct: 212 GLGLILKRMVE 222
Score = 85.0 bits (209), Expect = 4e-19
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
+N N +G T LH A S +++ +L+ A+ + + T +H A NL ++
Sbjct: 95 QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH-YEATAMHRAAAKGNLKMIH 153
Query: 859 LLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQ 916
+L + + N QD GNT LH A A LL+ GA I+N +T L +A+
Sbjct: 154 IL-LYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK 210
Score = 71.9 bits (175), Expect = 1e-14
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
+ D TALH A S GH ++V + +PLHIA IV+
Sbjct: 29 LATRTDQDSRTALHWACSAGHTEIVEF-LLQLGVPVNDKDDAGWSPLHIAASAGRDEIVK 87
Query: 859 LLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQM 918
LL K VNA + G T LHYAA N +A +LL+ GA P K+HY T +H A
Sbjct: 88 ALLG-KGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAK 146
Query: 919 TSLSLVRVLTHEAPFV 934
+L ++ +L +
Sbjct: 147 GNLKMIHILLYYKAST 162
Score = 61.5 bits (148), Expect = 4e-11
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
N + + TA+H A + G+ ++ +L+ Y+A NI + TPLH+AC + +
Sbjct: 128 NPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDT-EGNTPLHLACDEERVEEAK 186
Query: 859 LLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLK 896
LL++ ++ ++ T L A + +++
Sbjct: 187 LLVSQG-ASIYIENKEEKTPLQVAK-GGLGLILKRMVE 222
Score = 58.1 bits (139), Expect = 6e-10
Identities = 35/232 (15%), Positives = 79/232 (34%), Gaps = 19/232 (8%)
Query: 631 LHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNYL 690
+ A + + +L + T ++ T L A + ++ + N
Sbjct: 8 CNLAYSGKLEELKESILADKSLATRTDQDSRTALHWAC-SAGHTEIVEFLLQLGVPVNDK 66
Query: 691 VPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIK-KVEQLFALIEN 749
+ +D+ + A ++ VN + G P + K + E L+E
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN-QNGCTPLHYAASKNRHEIAVMLLEG 125
Query: 750 NEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYT 809
K ++ + + + + NI +++G T
Sbjct: 126 GANPDAKDHYEATAMHRAAAKGNLKMIHILLYY--------------KASTNIQDTEGNT 171
Query: 810 ALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLL 861
LH+A + +LL++ A I I + ++ TPL +A + I++ ++
Sbjct: 172 PLHLACDEERVEEAKLLVSQGASIYIENK-EEKTPLQVA-KGGLGLILKRMV 221
Score = 52.3 bits (124), Expect = 6e-08
Identities = 19/116 (16%), Positives = 30/116 (25%), Gaps = 33/116 (28%)
Query: 845 LHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINN------------------ 886
+ + L ++ + A + D TALH+A
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 887 ---------------HTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
+ LL GA+ N G T LH A + +L
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVML 122
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 101 bits (252), Expect = 3e-24
Identities = 51/274 (18%), Positives = 82/274 (29%), Gaps = 23/274 (8%)
Query: 623 VNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVHK 682
V + AA G T + LL+ GA+ N +T L A ++ V
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVEN 95
Query: 683 PKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQ 742
+ + P + + V ++ +
Sbjct: 96 GANINQP---DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAME 152
Query: 743 LFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINI 802
E N + E + +A L
Sbjct: 153 ELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIN------------------DVR 194
Query: 803 CNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLA 862
G TALH+A + G+ ++++LLI R D+NI TPLH A R+L+
Sbjct: 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDY-DGWTPLHAAAHWGKEEACRILVE 253
Query: 863 AKQCNVNAQDYRGNTALHYAAINNHTNLATLLLK 896
C++ A + G TA A + L L K
Sbjct: 254 NL-CDMEAVNKVGQTAFDVADEDILGYLEELQKK 286
Score = 81.3 bits (199), Expect = 2e-17
Identities = 43/282 (15%), Positives = 90/282 (31%), Gaps = 32/282 (11%)
Query: 584 TDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSII 643
+ A ++G V L+ +IN N G + LH A ++
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLE------RGADINYANVDGLTALHQACIDDNVDMV 89
Query: 644 QLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNYLVPKEKVSRPPSPP 703
+ L+++GAN + P YL E + +
Sbjct: 90 KFLVENGANINQPDNEGWIP-----------------LHAAASCGYLDIAEYLISQGAHV 132
Query: 704 PTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEIKLIKSYFGLSN 763
+ D + + + R +I+ + I + + + +++
Sbjct: 133 GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND 192
Query: 764 EEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLV 823
AK +V+ + + ++NI + DG+T LH A G +
Sbjct: 193 VRHAKSGGTALHVAAAKGYTEVL----KLLIQARYDVNIKDYDGWTPLHAAAHWGKEEAC 248
Query: 824 RLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQ 865
R+L+ D+ V + T +A ++ I+ L ++
Sbjct: 249 RILVENLCDMEAVNK-VGQTAFDVADED----ILGYLEELQK 285
Score = 74.8 bits (182), Expect = 3e-15
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 549 NSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALI 608
N Q + + ++ L + G TALH+A G+ +K LI
Sbjct: 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI 219
Query: 609 YFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNAN 668
++N + G +PLHAAA WG ++L+++ + NK T A+
Sbjct: 220 QARY------DVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273
Query: 669 NLHVAKLL 676
+ L
Sbjct: 274 E-DILGYL 280
Score = 74.0 bits (180), Expect = 7e-15
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSG 578
G T LHVAA G +V+ L+++ D N +D G +PLH AA G + +L+ +
Sbjct: 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255
Query: 579 ASINLTDNEGNTALHLATNNGHE 601
+ + G TA +A +
Sbjct: 256 CDMEAVNKVGQTAFDVADEDILG 278
Score = 69.7 bits (169), Expect = 2e-13
Identities = 28/161 (17%), Positives = 48/161 (29%), Gaps = 10/161 (6%)
Query: 497 CDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGC 556
+ + + G
Sbjct: 141 TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG 200
Query: 557 SPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVL 616
+ LH AA +G+ VL LL+ + +N+ D +G T LH A + G E + L+
Sbjct: 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN------ 254
Query: 617 NLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLEN 657
++ AVN G + A I+ L + L +
Sbjct: 255 LCDMEAVNKVGQTAFDVADE----DILGYLEELQKKQNLLH 291
Score = 60.5 bits (145), Expect = 2e-10
Identities = 43/233 (18%), Positives = 76/233 (32%), Gaps = 59/233 (25%)
Query: 501 EEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLH 560
E + + K T DD V A G + V +LE GAD N ++ G + LH
Sbjct: 21 ETDLEPPVVKRKKTKVKFDDG--AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALH 78
Query: 561 YAATRGHQNVLLL---------------------------------LLHSGASINLTDNE 587
A + +++ L+ GA + ++E
Sbjct: 79 QACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE 138
Query: 588 GNTALHLATNNGHETCVKALIYFNEQEVLNLN---------------------INAVNNQ 626
G+T L +A E ++ + ++
Sbjct: 139 GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS 198
Query: 627 GDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLL 676
G + LH AA GYT +++LL+ + +++ TPL A ++L
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251
Score = 52.8 bits (125), Expect = 7e-08
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 843 TPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQ 902
AC + + V LL ++N + G TALH A I+++ ++ L+++GA
Sbjct: 42 AVFLAACSSGDTEEVLRLLERG-ADINYANVDGLTALHQACIDDNVDMVKFLVENGANIN 100
Query: 903 IKNHYGQTCLHMAQQMTSLSLVRVLTH 929
++ G LH A L + L
Sbjct: 101 QPDNEGWIPLHAAASCGYLDIAEYLIS 127
Score = 52.0 bits (123), Expect = 1e-07
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 806 DGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQ 865
D A S G + V L+ ADIN LT LH AC ++N+ +V+ L
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANV-DGLTALHQACIDDNVDMVK-FLVENG 96
Query: 866 CNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQ 917
N+N D G LH AA + ++A L+ GA N G T L +A++
Sbjct: 97 ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE 148
Score = 44.3 bits (103), Expect = 4e-05
Identities = 12/44 (27%), Positives = 15/44 (34%)
Query: 872 DYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA 915
+ A + T LL+ GA N G T LH A
Sbjct: 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQA 80
Score = 43.6 bits (101), Expect = 7e-05
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 861 LAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTS 920
L + N G TALH AA +T + LL+++ IK++ G T LH A
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGK 244
Query: 921 LSLVRVL 927
R+L
Sbjct: 245 EEACRIL 251
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 103 bits (256), Expect = 3e-24
Identities = 43/300 (14%), Positives = 81/300 (27%), Gaps = 35/300 (11%)
Query: 535 IKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVL---LLLLHSGASINLTDNEGNTA 591
+L +D + + + AA G + L LLL S + + E A
Sbjct: 70 AHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQA 129
Query: 592 LHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGA 651
LA NGH + L + + + + AA G+ ++ L +
Sbjct: 130 FRLAAENGHLHVLNRLC----ELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAP 185
Query: 652 NPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLD 711
+ + A A + N+L+ L
Sbjct: 186 TEATAMIQ--------AENYYAFRWAAVGRGHHNVINFLL-------------DCPVMLA 224
Query: 712 YSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNA 771
Y++++E V + + + + L+ +E
Sbjct: 225 YAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVT-----KSECLQGFYM 279
Query: 772 CHPLCQCAKC-KEDVVES-ESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINY 829
L + D + S P D L +A LG+ LL++
Sbjct: 280 LRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339
Score = 84.6 bits (208), Expect = 4e-18
Identities = 34/190 (17%), Positives = 52/190 (27%), Gaps = 8/190 (4%)
Query: 504 INLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLEL---GADTNSQDLCGCSPLH 560
N Q + + VAA+ G +D + L
Sbjct: 72 YNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFR 131
Query: 561 YAATRGHQNVLLLLLHSGASINLTD--NEGNTALHLATNNGHETCVKALIYFNEQEVLNL 618
AA GH +VL L + + E A LA NGH + L E
Sbjct: 132 LAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLC---ELAPTEA 188
Query: 619 NINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNA 678
+ AA G+ ++I LLD + + N +A+ +N
Sbjct: 189 TAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNR 248
Query: 679 YVHKPKPLYN 688
Sbjct: 249 LKEMHDAFKL 258
Score = 82.6 bits (203), Expect = 2e-17
Identities = 43/358 (12%), Positives = 76/358 (21%), Gaps = 53/358 (14%)
Query: 557 SPLHYAATRGHQNVLLLLLHS-GASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEV 615
L +N+ + + S+ + + L E + L +
Sbjct: 14 PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYN 73
Query: 616 LNL-----NINAVNNQGDSPLHAAARWGYTSI---IQLLLDHGANPTLENKRKVTPLQNA 667
N + + + + AA G +S + LLL + + A
Sbjct: 74 RNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA 133
Query: 668 ---NNLHVAKLL---NAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANIS 721
+LHV L + L EA
Sbjct: 134 AENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVL--NRLCELAPTEATAM 191
Query: 722 NVNVREGVRPRNITEIKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKC 781
+ L++ A
Sbjct: 192 IQAENYYAFRWAAVGRGHHNVINFLLDCP-------------------------VMLAYA 226
Query: 782 KEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQ 841
+ E + V + + A ++ G +DLV +
Sbjct: 227 EIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGF-------YM 279
Query: 842 LTPLHIACQNNNLSIVRLLLAA----KQCNVNAQDYRGNTALHYAAINNHTNLATLLL 895
L L L +R LL+ N L A + LLL
Sbjct: 280 LRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL 337
Score = 75.7 bits (185), Expect = 4e-15
Identities = 21/144 (14%), Positives = 41/144 (28%), Gaps = 14/144 (9%)
Query: 798 LNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTR----------VKQLTPLHI 847
L++ + + + + + +LL Y A N + +K +
Sbjct: 37 LSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFV 96
Query: 848 ACQNNNLSIVRLL--LAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKN 905
A S + L L V A AA N H ++ L + +
Sbjct: 97 AAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM 156
Query: 906 --HYGQTCLHMAQQMTSLSLVRVL 927
+A + L ++ L
Sbjct: 157 IQAENYHAFRLAAENGHLHVLNRL 180
Score = 72.6 bits (177), Expect = 4e-14
Identities = 20/239 (8%), Positives = 51/239 (21%), Gaps = 22/239 (9%)
Query: 433 VEMSDLTTQLKVYNKYNNYKKISSLTKLFEFARLGDGDKVRAILQ-----EENKKEDSES 487
D L ++ + + A G + + + +
Sbjct: 103 SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENY 162
Query: 488 LPLCHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGAD 547
+ + + ++ T + + A G V++ +L+
Sbjct: 163 HAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 222
Query: 548 TNSQDLCGCSPLHYAATR---------GHQNVLLLLLHSGASINLTDNEGN-------TA 591
++ + L + +L
Sbjct: 223 LAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRN 282
Query: 592 LHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHG 650
L + ++ L+ + + + L A R G LLL
Sbjct: 283 LIRRNDEVLLDDIRFLLSIPGIKA-LAPTATIPGDANELLRLALRLGNQGACALLLSIP 340
Score = 69.2 bits (168), Expect = 4e-13
Identities = 26/214 (12%), Positives = 61/214 (28%), Gaps = 5/214 (2%)
Query: 706 QDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEIKLI-KSYFGLSNE 764
++ + + NE ++ ++ +E + + K +EQ+ L+ + S+
Sbjct: 25 ENLFQHFISANELSLMTLSYKEAI-HIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDA 83
Query: 765 EKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVR 824
K + A + + + ++ Y A +A GH ++
Sbjct: 84 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLN 143
Query: 825 LLINYRADINIVTRVKQ-LTPLHIACQNNNLSIVRLLLA--AKQCNVNAQDYRGNTALHY 881
L + + +A +N +L ++ L + Q
Sbjct: 144 RLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWA 203
Query: 882 AAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA 915
A H N+ LL +
Sbjct: 204 AVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKY 237
Score = 62.6 bits (151), Expect = 7e-11
Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 15/141 (10%)
Query: 801 NICNSDGYTALHIATSLGHYDLVRLLIN-YRADINIVTRVKQLTPLHIACQNNNLSIVRL 859
NI N + L + + +L + I+ + ++ K+ + + N + +L
Sbjct: 6 NIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSY-KEAIHIFLPGTKNMEQVRQL 64
Query: 860 LLAA----------KQCNVNAQDYRGNTALHYAAINNHTN---LATLLLKSGARPQIKNH 906
L + + + + AAI ++ LLL S ++
Sbjct: 65 LCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQA 124
Query: 907 YGQTCLHMAQQMTSLSLVRVL 927
+A + L ++ L
Sbjct: 125 ENYQAFRLAAENGHLHVLNRL 145
Score = 42.2 bits (98), Expect = 2e-04
Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 5/68 (7%)
Query: 522 GFTVLHVAALYGRIKVVDLVLELGAD-----TNSQDLCGCSPLHYAATRGHQNVLLLLLH 576
L + + +L + T + L A G+Q LLL
Sbjct: 279 MLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 338
Query: 577 SGASINLT 584
+ + LT
Sbjct: 339 IPSVLALT 346
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 98.7 bits (244), Expect = 3e-23
Identities = 50/341 (14%), Positives = 96/341 (28%), Gaps = 68/341 (19%)
Query: 557 SPLH-YAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEV 615
SP+ + G + + +I T LH +N + LI +E
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKE- 59
Query: 616 LNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKL 675
+ GA+ + + TPL A +L
Sbjct: 60 ------------------------------CIAAGADVNAMDCDENTPLMLAVLARRRRL 89
Query: 676 LNAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNIT 735
+ + Y N E
Sbjct: 90 VAYLMKAGADPTIY----------------------------------NKSERSALHQAA 115
Query: 736 EIKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTD 795
+ + ++ + ++K + + A + + +VE ++ D
Sbjct: 116 ANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD 175
Query: 796 ECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLS 855
+ G TALH A + + +V+ L+ + TP+ +A Q +
Sbjct: 176 GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE 235
Query: 856 IVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLK 896
+V L+ +V A D +TA A NNH N+ + +
Sbjct: 236 VVMYLIQQG-ASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 75.2 bits (183), Expect = 3e-15
Identities = 34/119 (28%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIK-VVDLVLELGADTN 549
+ S E S +G T LH AA + V LV E G++ +
Sbjct: 156 RDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD 215
Query: 550 SQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALI 608
QD G +P+ AA G V++ L+ GAS+ D +TA LA N H V
Sbjct: 216 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274
Score = 74.8 bits (182), Expect = 4e-15
Identities = 43/304 (14%), Positives = 93/304 (30%), Gaps = 35/304 (11%)
Query: 628 DSPLH-AAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLLNAYVHKP 683
+SP+ G +I + + N ++ + T L ++ ++ L + K
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVN-IIDPRHNRTVLHWIASNSSAEKSEDLIVHEAK- 58
Query: 684 KPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQL 743
A+++ ++ E ++ +
Sbjct: 59 ----------------------------ECIAAGADVNAMDCDENTPLMLAVLARRRRLV 90
Query: 744 FALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINIC 803
L++ I + S + N + + + + I
Sbjct: 91 AYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 150
Query: 804 NSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAA 863
+ + L ++ + A + K T LH A Q +N+ IV+ L+
Sbjct: 151 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKY-KGRTALHYAAQVSNMPIVKYLVGE 209
Query: 864 KQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSL 923
K N + QD G T + AA + L++ GA + + T +AQ ++
Sbjct: 210 KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI 269
Query: 924 VRVL 927
V +
Sbjct: 270 VDIF 273
Score = 69.0 bits (167), Expect = 3e-13
Identities = 39/313 (12%), Positives = 89/313 (28%), Gaps = 49/313 (15%)
Query: 526 LHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLH--------S 577
LH A G + + + + + LH+ A+ L+ +
Sbjct: 6 LHTEAA-GSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAA 63
Query: 578 GASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARW 637
GA +N D + NT L LA V L+ N S LH AA
Sbjct: 64 GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD------PTIYNKSERSALHQAAAN 117
Query: 638 GYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNYLVPKEKVS 697
++ +L+ + + + + + + +
Sbjct: 118 RDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGA 177
Query: 698 RPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEIKLIKS 757
+ + + +N+ V K +
Sbjct: 178 ARKDSEKYKGRTALHYAAQVSNMPIV-----------------------------KYLVG 208
Query: 758 YFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSL 817
G + +++ D + + + +VV + + ++ ++ +TA +A +
Sbjct: 209 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY----LIQQGASVEAVDATDHTARQLAQAN 264
Query: 818 GHYDLVRLLINYR 830
H+++V + R
Sbjct: 265 NHHNIVDIFDRCR 277
Score = 65.1 bits (157), Expect = 5e-12
Identities = 41/245 (16%), Positives = 76/245 (31%), Gaps = 30/245 (12%)
Query: 458 TKLFEFARLGDGDKVRAILQEE-----------NKKEDSESLPLCHPLCSCDDCEEAINL 506
T L A +K ++ E N + E+ PL + + A +
Sbjct: 35 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLM 94
Query: 507 KHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRG 566
K + +G + + +L D D G + L A
Sbjct: 95 KAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNE 154
Query: 567 HQ-----------NVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEV 615
+ + A + +G TALH A + VK L+
Sbjct: 155 GRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK---- 210
Query: 616 LNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHV 672
N + + G +P+ AA+ G ++ L+ GA+ + T Q A N+ ++
Sbjct: 211 -GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNI 269
Query: 673 AKLLN 677
+ +
Sbjct: 270 VDIFD 274
Score = 29.3 bits (64), Expect = 2.2
Identities = 5/25 (20%), Positives = 8/25 (32%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLE 543
D T +A +VD+
Sbjct: 251 DATDHTARQLAQANNHHNIVDIFDR 275
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 99.0 bits (245), Expect = 3e-23
Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 53/199 (26%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLELGADTN----------------------------- 549
D+ G T LH +++V +++ G++
Sbjct: 104 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALL 163
Query: 550 --------SQDLCGCSPLHYAATRGHQN-------------VLLLLLHSGASINLTDNEG 588
+D + LH+ + ++ I NE
Sbjct: 164 DYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEK 223
Query: 589 NTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLD 648
+ + ++ ++ L + + ++ +NA ++ GD+ L+ AAR G SI+ LLD
Sbjct: 224 ESKPNDKNGERKDSILENL---DLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 280
Query: 649 HGANPTLENKRKVTPLQNA 667
+GA+P + NK + P+
Sbjct: 281 YGADPFIANKSGLRPVDFG 299
Score = 89.7 bits (221), Expect = 4e-20
Identities = 49/314 (15%), Positives = 97/314 (30%), Gaps = 33/314 (10%)
Query: 535 IKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHL 594
+K++ + + N Q + + L Q + L + ++ N N
Sbjct: 19 LKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQH 78
Query: 595 ATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPT 654
+ ++ ++ + LNLNI V+ G++PLH +++ L+ HG+N
Sbjct: 79 VSF---DSLLQEVNDAFPNTQLNLNI-PVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL 134
Query: 655 LENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSD 714
+ + L A + LY L
Sbjct: 135 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCL------------------------ 170
Query: 715 VNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACHP 774
+ + R + IT A + + + +
Sbjct: 171 ----ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 226
Query: 775 LCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADIN 834
++D + +N +S+G T L+IA LG+ +V L++Y AD
Sbjct: 227 PNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 286
Query: 835 IVTRVKQLTPLHIA 848
I + L P+
Sbjct: 287 IANK-SGLRPVDFG 299
Score = 83.6 bits (205), Expect = 5e-18
Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 16/165 (9%)
Query: 767 VPDNACHPLCQCAKCKEDVVESESRPVTDECL--NINICNSDGYTALHIATSLGHYDL-- 822
DN A + +S + + L + + +S T LH
Sbjct: 135 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCS 194
Query: 823 ----------VRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLL--AAKQCNVNA 870
+ ++ + ++ + + SI+ L +NA
Sbjct: 195 AAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNA 254
Query: 871 QDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA 915
QD G+T L+ AA + ++ LL GA P I N G +
Sbjct: 255 QDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299
Score = 69.7 bits (169), Expect = 2e-13
Identities = 28/198 (14%), Positives = 59/198 (29%), Gaps = 26/198 (13%)
Query: 458 TKLFEFARLGDGDKVRAILQE--ENKKEDSESLPLCHPLCSCDDCEEAINLKHSQS--KP 513
T L + + + V+ +++ D+ + ++ + P
Sbjct: 109 TPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP 168
Query: 514 TTQSMDDRGFTVLHVAALYGRIKVVD-------------LVLELGADTNSQDLCGCSPLH 560
D T+LH + + +V + S S +
Sbjct: 169 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN 228
Query: 561 YAATRGHQNVLLLLLHS---GASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLN 617
++L L +N D+ G+T L++A G+ + V AL+ +
Sbjct: 229 DKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG------ 282
Query: 618 LNINAVNNQGDSPLHAAA 635
+ N G P+ A
Sbjct: 283 ADPFIANKSGLRPVDFGA 300
Score = 67.4 bits (163), Expect = 1e-12
Identities = 37/316 (11%), Positives = 82/316 (25%), Gaps = 42/316 (13%)
Query: 574 LLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHA 633
++ + S + DNE L ++ + + N N ++ H
Sbjct: 21 IMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSS-NQQQQHV 79
Query: 634 AARWGYTSIIQLLLDHGANPTLE-NKRKVTPLQNA---NNLHVAKLLNAYVHKPKPLYNY 689
+ + + N + ++ TPL NL + K L +
Sbjct: 80 SFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH---------- 129
Query: 690 LVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIEN 749
S+ + + +
Sbjct: 130 ----------------------GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY 167
Query: 750 NEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYT 809
+ L S + + AK D++ V + I ++ +
Sbjct: 168 PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG--WIVKKQNRPIQSGTNEKES 225
Query: 810 ALHIATSLGHYDLVR-LLINYRADINIVTRVKQ-LTPLHIACQNNNLSIVRLLLAAKQCN 867
+ ++ L + + + + T L+IA + N+SIV LL +
Sbjct: 226 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG-AD 284
Query: 868 VNAQDYRGNTALHYAA 883
+ G + + A
Sbjct: 285 PFIANKSGLRPVDFGA 300
Score = 65.1 bits (157), Expect = 8e-12
Identities = 30/241 (12%), Positives = 76/241 (31%), Gaps = 52/241 (21%)
Query: 739 KVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECL 798
K+E + EI+ + + + + + Q + +++ + + L
Sbjct: 38 KLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQL 97
Query: 799 NINI-CNSDGYTALHIATSLGHYDLVRLLINYRADINIVTR------------------- 838
N+NI + G T LH TS+ + +LV+ L+ + ++
Sbjct: 98 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 157
Query: 839 -----------------VKQLTPLHIACQNNNL------------SIVRLLLAAKQCNVN 869
T LH + + ++ ++ + +
Sbjct: 158 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQ 217
Query: 870 AQDYRGNTALHYAAINNHTNLATLLLKS---GARPQIKNHYGQTCLHMAQQMTSLSLVRV 926
+ + + ++ L ++ G TCL++A ++ ++S+V
Sbjct: 218 SGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDA 277
Query: 927 L 927
L
Sbjct: 278 L 278
Score = 61.2 bits (147), Expect = 1e-10
Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 2/122 (1%)
Query: 798 LNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIV 857
+N N L ++ L N ++ N ++ L V
Sbjct: 30 VNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRN-SEGGSSNQQQQHVSFDSLLQEV 88
Query: 858 RLLLAAKQCNVNAQ-DYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQ 916
Q N+N D GNT LH+ + L L+K G+ ++ G++CL A
Sbjct: 89 NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAV 148
Query: 917 QM 918
+
Sbjct: 149 KS 150
Score = 30.8 bits (68), Expect = 0.82
Identities = 13/91 (14%), Positives = 26/91 (28%), Gaps = 1/91 (1%)
Query: 838 RVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKS 897
++K L + L + H + + + +
Sbjct: 36 KMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT 95
Query: 898 GARPQIK-NHYGQTCLHMAQQMTSLSLVRVL 927
I + +G T LH + +L LV+ L
Sbjct: 96 QLNLNIPVDEHGNTPLHWLTSIANLELVKHL 126
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 92.8 bits (229), Expect = 2e-21
Identities = 58/283 (20%), Positives = 96/283 (33%), Gaps = 38/283 (13%)
Query: 620 INAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKR---KVTPLQNANNLHVAKLL 676
V GD+ LH A + + LL A + + T LH+A +L
Sbjct: 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTA------LHLAAIL 55
Query: 677 NAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITE 736
K + ++ ++ A
Sbjct: 56 GEASTVEKLYAAG------------AGVLVAERGGHTALHLACRVR-------------- 89
Query: 737 IKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDE 796
+ + + + +++ PD + P ++ + E D
Sbjct: 90 AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDE--DW 147
Query: 797 CLNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSI 856
L + N DG+T LH+A ++VRLL + AD+N TPLH+A + S+
Sbjct: 148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASV 207
Query: 857 VRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGA 899
+ LLL A + A+ Y G T L A + + LA LL GA
Sbjct: 208 LELLLKAG-ADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 85.1 bits (209), Expect = 7e-19
Identities = 43/286 (15%), Positives = 75/286 (26%), Gaps = 48/286 (16%)
Query: 555 GCSPLHYAATRGHQNVLLLLLHSGAS---INLTDNEGNTALHLATNNGHETCVKALIYFN 611
G + LH A H+ L LL A ++L ++ G TALHLA G + V+ L
Sbjct: 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68
Query: 612 EQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQ---NAN 668
+ G + LH A R + +LL + + +
Sbjct: 69 AG------VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122
Query: 669 NLHVAKLLNAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREG 728
H +++ + + N
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWR------------------LQLEAENYDGHTPLHV 164
Query: 729 VRPRNITEIKKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVES 788
E+ ++L++ N+ + V+E
Sbjct: 165 AVIHKDAEM--------------VRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLEL 210
Query: 789 ESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRADIN 834
+ + G T L A + L RLL + A
Sbjct: 211 ----LLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
Score = 70.5 bits (171), Expect = 6e-14
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 11/145 (7%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLELGADT---NSQDLCGCSPLHYAATRGHQNVLLLLL 575
+ G T LH+A ++ +D +L A + Q+ G + LH AA G + + L
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65
Query: 576 HSGASINLTDNEGNTALHLATNNGHETCVKALI----YFNEQEVLNLNINAVNNQGDSPL 631
+GA + + + G+TALHLA TC L+ + + D+
Sbjct: 66 AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSH 125
Query: 632 HAAARW----GYTSIIQLLLDHGAN 652
AA D
Sbjct: 126 APAAVDSQPNPENEEEPRDEDWRLQ 150
Score = 67.8 bits (164), Expect = 5e-13
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 843 TPLHIACQNNNLSIVRLLLA--AKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGAR 900
T LH+A + + + LL A ++ Q+ G TALH AAI + L +GA
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70
Query: 901 PQIKNHYGQTCLHMAQQMTSLSLVRVL 927
+ G T LH+A ++ + + VL
Sbjct: 71 VLVAERGGHTALHLACRVRAHTCACVL 97
Score = 64.3 bits (155), Expect = 7e-12
Identities = 46/216 (21%), Positives = 69/216 (31%), Gaps = 45/216 (20%)
Query: 506 LKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATR 565
L S +D G T LH+AA+ G V+ + GA + G + LH A
Sbjct: 29 LGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRV 88
Query: 566 GHQNVLLLLLHSGASINLTDNE----------GNTALHLATNNGHETCVKALIYFNEQEV 615
+LL S ++ +T+ A + +E
Sbjct: 89 RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148
Query: 616 LNLNINAVN--------------------------------NQGDSPLHAAARWGYTSII 643
L L + G +PLH A S++
Sbjct: 149 LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVL 208
Query: 644 QLLLDHGANPTLENKRKVTPLQNA---NNLHVAKLL 676
+LLL GA+PT TPL +A N +A+LL
Sbjct: 209 ELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL 244
Score = 60.1 bits (144), Expect = 2e-10
Identities = 28/242 (11%), Positives = 52/242 (21%), Gaps = 51/242 (21%)
Query: 458 TKLFEFARLGDGDKVRAILQEE------NKKEDSESLPLCHPLCSCDDCEEAINLKHSQS 511
T L + +L + + D L +
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70
Query: 512 KPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTN--------------SQDLCGCS 557
+ H+A ++L+ + D
Sbjct: 71 VLVAERGGHTAL---HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127
Query: 558 PLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLAT--------------------- 596
+ + + +G+T LH+A
Sbjct: 128 AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP 187
Query: 597 -NNGHETCVKALIYFNEQEVLNL------NINAVNNQGDSPLHAAARWGYTSIIQLLLDH 649
T + + VL L + A G +PL +A + +LL H
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247
Query: 650 GA 651
GA
Sbjct: 248 GA 249
Score = 55.9 bits (133), Expect = 5e-09
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Query: 804 NSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAA 863
++ A + + ++R + TPLH+A + + +VRLL A
Sbjct: 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA-ENYDGHTPLHVAVIHKDAEMVRLLRDA 180
Query: 864 KQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSL 923
+ G T LH A ++ LLLK+GA P + + G+T L A + L
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPIL 240
Query: 924 VRVL-THEAP 932
R+L H AP
Sbjct: 241 ARLLRAHGAP 250
Score = 51.2 bits (121), Expect = 2e-07
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 875 GNTALHYAAINNHTNLATLLLKSGARPQ---IKNHYGQTCLHMA 915
G+TALH A I+ H LL A + ++N GQT LH+A
Sbjct: 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLA 52
Score = 35.1 bits (79), Expect = 0.027
Identities = 8/31 (25%), Positives = 10/31 (32%)
Query: 519 DDRGFTVLHVAALYGRIKVVDLVLELGADTN 549
G T L A L + L+ GA
Sbjct: 222 MYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 79.1 bits (193), Expect = 5e-17
Identities = 42/236 (17%), Positives = 71/236 (30%), Gaps = 15/236 (6%)
Query: 627 GDSPLHAAARWGYTSIIQLLLD----HGANPTLENKRKVTPLQNANNLHVAKLLNAYVHK 682
GD+PLH A G + L++ G + N + TPL A +
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAV-------ITTLPSV 55
Query: 683 PKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQ 742
+ L + R A + + +
Sbjct: 56 VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALH 115
Query: 743 LFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINI 802
+ E E + G + + PL + + + + N+N
Sbjct: 116 VAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV---QLLLQHGANVNA 172
Query: 803 CNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
G +ALH A+ G LVR L+ AD ++ TPL +A + I+R
Sbjct: 173 QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC-HNDTPLMVARSRRVIDILR 227
Score = 67.6 bits (163), Expect = 4e-13
Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 12/238 (5%)
Query: 587 EGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLL 646
+G+T LH+A G+ V L+ +Q ++ NN +PLH A S+++LL
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQG--GRELDIYNNLRQTPLHLAVITTLPSVVRLL 59
Query: 647 LDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNYLVPKEKVSRPPSPPPTQ 706
+ GA+P ++ T A L A + P L +
Sbjct: 60 VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 119
Query: 707 DKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEIKLIKSYFGLSNEEK 766
+ + + ++++ +I + + + + G + +
Sbjct: 120 TECQETVQLLLERGADID------AVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQ 173
Query: 767 VPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVR 824
+ + + +V + + + ++ N T L +A S D++R
Sbjct: 174 MYSGSSALHSASGRGLLPLVRT----LVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 66.0 bits (159), Expect = 2e-12
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 772 CHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRA 831
C + + L++ N DG TALH+A + + V+LL+ A
Sbjct: 75 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGA 134
Query: 832 DINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLA 891
DI+ V +PL A +NN+LS+V+LLL Q Y G++ALH A+ L
Sbjct: 135 DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA-QMYSGSSALHSASGRGLLPLV 193
Query: 892 TLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVR 925
L++SGA +KN + T L +A+ + ++R
Sbjct: 194 RTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 65.6 bits (158), Expect = 2e-12
Identities = 28/115 (24%), Positives = 51/115 (44%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNS 550
+ +C+E + L + G + L A + +V L+L+ GA+ N+
Sbjct: 113 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA 172
Query: 551 QDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVK 605
Q G S LH A+ RG ++ L+ SGA +L + +T L +A + ++
Sbjct: 173 QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 52.5 bits (124), Expect = 5e-08
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 555 GCSPLHYAATRGHQNVLLLLL----HSGASINLTDNEGNTALHLATNNGHETCVKALIYF 610
G +PLH A +G+ + L+ G +++ +N T LHLA + V+ L+
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 611 NEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANP 653
A++ G + H A + ++ LLD A
Sbjct: 63 GAS------PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPG 99
Score = 52.2 bits (123), Expect = 7e-08
Identities = 39/132 (29%), Positives = 53/132 (40%), Gaps = 10/132 (7%)
Query: 806 DGYTALHIATSLGHYDLVRLLINYR----ADINIVTRVKQLTPLHIACQNNNLSIVRLLL 861
DG T LHIA G+ V L+N +++I ++Q TPLH+A V LL
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITTL-PSVVRLL 59
Query: 862 AAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHY----GQTCLHMAQQ 917
+ A D G TA H A + LL S A + G T LH+A
Sbjct: 60 VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 119
Query: 918 MTSLSLVRVLTH 929
V++L
Sbjct: 120 TECQETVQLLLE 131
Score = 50.6 bits (119), Expect = 2e-07
Identities = 48/232 (20%), Positives = 85/232 (36%), Gaps = 24/232 (10%)
Query: 458 TKLFEFARLGDGDKVRAILQEE-------NKKEDSESLPLCHPLCSCDDCEEAINLKHSQ 510
T L G+ V ++ + + PL + + +
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPS---VVRLLVT 61
Query: 511 SKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLC----GCSPLHYAATRG 566
+ + ++D G T H+A + + +L+ A G + LH A
Sbjct: 62 AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121
Query: 567 HQNVLLLLLHSGASINLTDN-EGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNN 625
Q + LLL GA I+ D G + L A N + V+ L+ +NA
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN------VNAQMY 175
Query: 626 QGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA---NNLHVAK 674
G S LH+A+ G +++ L+ GA+ +L+N TPL A + + +
Sbjct: 176 SGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 50.6 bits (119), Expect = 2e-07
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 520 DRGFTVLHVAALYGRIKVVDLVLEL----GADTNSQDLCGCSPLHYAATRGHQNVLLLLL 575
+ G T LH+A + G + V ++ L G + + + +PLH A +V+ LL+
Sbjct: 1 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60
Query: 576 HSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAA 635
+GAS D G TA HLA + TC++AL+ L++ A N G + LH A
Sbjct: 61 TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPG--TLDLEARNYDGLTALHVAV 118
Query: 636 RWGYTSIIQLLLDHGANP 653
+QLLL+ GA+
Sbjct: 119 NTECQETVQLLLERGADI 136
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 67.5 bits (163), Expect = 4e-13
Identities = 42/274 (15%), Positives = 69/274 (25%), Gaps = 52/274 (18%)
Query: 589 NTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLD 648
N LH A V+ L+ + + G PLH + + I LL
Sbjct: 1 NYPLHQACMENEFFKVQELL-----HSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLS 55
Query: 649 HGANPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPLYNYLVPKEKVSRPPSPPPTQDK 708
+ Y S +
Sbjct: 56 KM-----------------------------ENVNLDDYPDDSGWTPFHIACSVGNLEVV 86
Query: 709 YLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFALIENNEIKLIKSYFGLSNEEKVP 768
Y + +++ + + K E LIEN IK F +
Sbjct: 87 KSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAA 146
Query: 769 DNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLI- 827
L + +N + G+T L A + GH D LL+
Sbjct: 147 SVGSLKLIELLCGL-------------GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVE 193
Query: 828 NYRADINIVTRVKQLTPLHIACQNNNLSIVRLLL 861
Y A+ ++V K +A + + L
Sbjct: 194 KYGAEYDLVDN-KGAKAEDVALNEQ---VKKFFL 223
Score = 67.2 bits (162), Expect = 6e-13
Identities = 16/76 (21%), Positives = 28/76 (36%)
Query: 843 TPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQ 902
PLH AC N V+ LL +K + +D G LH++ + + LL
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 903 IKNHYGQTCLHMAQQM 918
+ ++ +
Sbjct: 62 LDDYPDDSGWTPFHIA 77
Score = 66.4 bits (160), Expect = 1e-12
Identities = 34/273 (12%), Positives = 63/273 (23%), Gaps = 47/273 (17%)
Query: 628 DSPLHAAARWGYTSIIQLLLD-HGANPTLENKRKVTPLQNANNLHVAKLLNAYVHKPKPL 686
+ PLH A +Q LL + +++ PL H + A+ L
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPL------HWSVSFQAHEITSFLL 54
Query: 687 YNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQLFAL 746
S ++ + +
Sbjct: 55 SKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKIT------------ 102
Query: 747 IENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSD 806
+ S+ + + ++ I +
Sbjct: 103 -------------------------NQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKF 137
Query: 807 GYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQC 866
LH A S+G L+ LL + TPL A + LL+
Sbjct: 138 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA 197
Query: 867 NVNAQDYRGNTALHYAAINNHTNLATLLLKSGA 899
+ D +G A A + + L +
Sbjct: 198 EYDLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227
Score = 58.3 bits (139), Expect = 6e-10
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNS 550
H CS + E +L KP + ++G T LH+A +V ++E GA
Sbjct: 74 FHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI 133
Query: 551 QDLCGCSPLHYAATRGHQNVLLLLLHSGAS-INLTDNEGNTALHLATNNGHETCVKALIY 609
+D PLH AA+ G ++ LL G S +N D +G T L A GH L+
Sbjct: 134 KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV- 192
Query: 610 FNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGAN 652
E + V+N+G A + + L++ +
Sbjct: 193 ----EKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD 228
Score = 57.9 bits (138), Expect = 8e-10
Identities = 47/226 (20%), Positives = 86/226 (38%), Gaps = 12/226 (5%)
Query: 458 TKLFEFARLGDGDKVRAILQEE----NKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKP 513
L + + KV+ +L + +K+ +PL + + L ++
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 514 TTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGC--SPLHYAATRGHQNVL 571
DD G+T H+A G ++VV + + + + + LH A + V
Sbjct: 62 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121
Query: 572 LLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPL 631
L+ +GAS+ + D LH A + G ++ L + +N + QG +PL
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKS-----AVNWQDKQGWTPL 176
Query: 632 HAAARWGYTSIIQLLLD-HGANPTLENKRKVTPLQNANNLHVAKLL 676
A G+ LL++ +GA L + + A N V K
Sbjct: 177 FHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFF 222
Score = 55.6 bits (132), Expect = 5e-09
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 772 CHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRA 831
A ++ +S ++N + G T LH+A +++ + LI A
Sbjct: 70 GWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGA 129
Query: 832 DINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLA 891
+ I + Q PLH A +L ++ LL + VN QD +G T L +A H + A
Sbjct: 130 SVRIKDKFNQ-IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA 188
Query: 892 TLLL-KSGARPQIKNHYGQTCLHMAQQ 917
LL+ K GA + ++ G +A
Sbjct: 189 VLLVEKYGAEYDLVDNKGAKAEDVALN 215
Score = 47.1 bits (110), Expect = 3e-06
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 876 NTALHYAAINNHTNLATLLLKS-GARPQIKNHYGQTCLHMA 915
N LH A + N LL S + K+ G+ LH +
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWS 41
Score = 42.5 bits (98), Expect = 1e-04
Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
+ + DG LH + S +++ L++ ++N+ + ++
Sbjct: 26 LLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEV 85
Query: 859 LLL---AAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMA 915
+ + ++N +G T LH A ++ L+++GA +IK+ + Q LH A
Sbjct: 86 VKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 145
Query: 916 QQM 918
+
Sbjct: 146 ASV 148
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 64.9 bits (156), Expect = 3e-12
Identities = 24/210 (11%), Positives = 49/210 (23%), Gaps = 12/210 (5%)
Query: 627 GDSPLHAAARWGYTS----IIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLNAYVHK 682
GDS LH A + +I+ + A +N + TPL A + + +
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITN-----QPEIAE 56
Query: 683 PKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEIKKVEQ 742
++ S +
Sbjct: 57 ALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 116
Query: 743 LFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINI 802
L ++ I + G + P N L + + ++N
Sbjct: 117 LASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN---PDLVSLLLKCGADVNR 173
Query: 803 CNSDGYTALHIATSLGHYDLVRLLINYRAD 832
GY+ + + + L +
Sbjct: 174 VTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 61.1 bits (146), Expect = 7e-11
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Query: 772 CHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRA 831
H C+ V ++S + N +G+T LH+A+ G+ +V LL++ A
Sbjct: 76 LHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA 135
Query: 832 DINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLA 891
D+N T LH+A N +V LLL +VN Y+G + T +
Sbjct: 136 DVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPSTRIQ 194
Query: 892 TLLLKSGA 899
L +
Sbjct: 195 QQLGQLTL 202
Score = 55.3 bits (131), Expect = 5e-09
Identities = 23/99 (23%), Positives = 29/99 (29%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNS 550
C L S + L S G T LH+A +V L+L+ GAD N
Sbjct: 114 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 173
Query: 551 QDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGN 589
G SP R + L E
Sbjct: 174 VTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESE 212
Score = 52.6 bits (124), Expect = 4e-08
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNS 550
C C + ++ + G T LH+A+++G + +V+L++ LGAD N+
Sbjct: 80 CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA 139
Query: 551 QDLC-GCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALI 608
Q+ C G + LH A + +++ LLL GA +N +G + L + L
Sbjct: 140 QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLG 198
Score = 52.2 bits (123), Expect = 5e-08
Identities = 36/204 (17%), Positives = 63/204 (30%), Gaps = 51/204 (25%)
Query: 522 GFTVLHVAALYGRIKVVDLVLEL----GADTNSQDLCGCSPLHYAATRGHQNV------- 570
G + LH+A ++ + V+ A N Q+ +PLH A +
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61
Query: 571 --------------------------------LLLLLHSGASINLTDNEGNTALHLATNN 598
H + + T+ G+T LHLA+ +
Sbjct: 62 GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121
Query: 599 GHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENK 658
G+ V+ L+ N G + LH A ++ LLL GA+
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCN-----GRTALHLAVDLQNPDLVSLLLKCGADVNRVTY 176
Query: 659 RKVTPLQNA---NNLHVAKLLNAY 679
+ +P Q + + + L
Sbjct: 177 QGYSPYQLTWGRPSTRIQQQLGQL 200
Score = 52.2 bits (123), Expect = 6e-08
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 7/106 (6%)
Query: 556 CSPLHYAATRGHQNVLLLLLHSGASI-NLTDNEGNTALHLATNNGHETCVKALIYFNEQE 614
+ LH A+ G+ ++ LL+ GA + G TALHLA + + V L+
Sbjct: 112 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA-- 169
Query: 615 VLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRK 660
++N V QG SP T I Q L
Sbjct: 170 ----DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPES 211
Score = 49.1 bits (115), Expect = 5e-07
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 875 GNTALHYAAINNHTNLATLLLK----SGARPQIKNHYGQTCLHMAQQM 918
G++ LH A I+ L +++ A +N+ QT LH+A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVIT 49
Score = 48.7 bits (114), Expect = 1e-06
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 844 PLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQI 903
LH+A + L IV LL++ + G TALH A + +L +LLLK GA
Sbjct: 114 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 173
Query: 904 KNHYGQTCLHMAQQMTSLSLVRVL 927
+ G + + S + + L
Sbjct: 174 VTYQGYSPYQLTWGRPSTRIQQQL 197
Score = 48.4 bits (113), Expect = 1e-06
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 843 TPLHIACQNNNLSIVRLL---LAAKQCNVNAQDYRGNTALHYAAINNH 887
+ LH+A + ++ + + +N Q+ T LH A I N
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQ 51
Score = 44.5 bits (103), Expect = 2e-05
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 806 DGYTALHIATSLGHYD----LVRLLINYRADINIVTRVKQLTPLHIACQNNN 853
DG + LH+A ++R + A +N ++Q TPLH+A N
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAVITNQ 51
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 63.3 bits (152), Expect = 9e-12
Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 43/198 (21%)
Query: 517 SMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLL--- 573
+MD G T LH+AA + R +L+ GAD NSQD G +PLH A V +
Sbjct: 18 TMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLR 77
Query: 574 -------------------------------LLHSGASINLTDNEGNTALHLATNNGHET 602
L+ + A IN DN G TALH A +
Sbjct: 78 NRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTE 137
Query: 603 CVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVT 662
V L+ + N +A +++ ++PL AAR G + LLD+ AN + +
Sbjct: 138 AVNILLMHHA------NRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRL 191
Query: 663 PLQNA---NNLHVAKLLN 677
P A + + +LL+
Sbjct: 192 PRDVASERLHHDIVRLLD 209
Score = 63.3 bits (152), Expect = 9e-12
Identities = 27/117 (23%), Positives = 48/117 (41%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNS 550
+ + E + + + D+ G T LH AA + V+++L A+ ++
Sbjct: 92 TPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDA 151
Query: 551 QDLCGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKAL 607
QD +PL AA G LL + A+ +TD+ +A+ H V+ L
Sbjct: 152 QDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208
Score = 57.9 bits (138), Expect = 5e-10
Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 7/190 (3%)
Query: 458 TKLFEFARLGDGDKVRAILQEENKKEDSESLPLCHPLCSCD-DCEEAINLKHSQSKPTTQ 516
T L AR D + +L ++ + D +
Sbjct: 25 TSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLN 84
Query: 517 SMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLH 576
+ G T L +AA +V+ ++ AD N+ D G + LH+AA + + +LL
Sbjct: 85 ARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLM 144
Query: 577 SGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAAR 636
A+ + D++ T L LA G KAL+ N ++ P A+
Sbjct: 145 HHANRDAQDDKDETPLFLAAREGSYEASKALLDNF------ANREITDHMDRLPRDVASE 198
Query: 637 WGYTSIIQLL 646
+ I++LL
Sbjct: 199 RLHHDIVRLL 208
Score = 54.8 bits (130), Expect = 7e-09
Identities = 44/185 (23%), Positives = 65/185 (35%), Gaps = 3/185 (1%)
Query: 743 LFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINI 802
L K + + + A D + + + N+N
Sbjct: 27 LHLAARFARADAAK-RLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNA 85
Query: 803 CNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLA 862
DG T L +A L +V LI ADIN T LH A NN V +L
Sbjct: 86 RMHDGTTPLILAARLAIEGMVEDLITADADINAADN-SGKTALHWAAAVNNTEAVNIL-L 143
Query: 863 AKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLS 922
N +AQD + T L AA + LL + A +I +H + +A +
Sbjct: 144 MHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHD 203
Query: 923 LVRVL 927
+VR+L
Sbjct: 204 IVRLL 208
Score = 54.4 bits (129), Expect = 8e-09
Identities = 37/243 (15%), Positives = 72/243 (29%), Gaps = 49/243 (20%)
Query: 619 NINA-VNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLLN 677
+NA ++ G++ LH AAR+ + LLD GA+ ++ TPL A +
Sbjct: 14 ELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQ 73
Query: 678 AYVHKPKPLYNYLVPKEKVSRPPSPPPTQDKYLDYSDVNEANISNVNVREGVRPRNITEI 737
+ N + + + ++ +A+I+ +
Sbjct: 74 ILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAAD------------- 120
Query: 738 KKVEQLFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDEC 797
++ L A +
Sbjct: 121 -------------------------------NSGKTALHWAAAVNNTEAVNILLMHHANR 149
Query: 798 LNINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIV 857
+ + T L +A G Y+ + L++ A+ I P +A + + IV
Sbjct: 150 ---DAQDDKDETPLFLAAREGSYEASKALLDNFANREITDH-MDRLPRDVASERLHHDIV 205
Query: 858 RLL 860
RLL
Sbjct: 206 RLL 208
Score = 46.7 bits (109), Expect = 4e-06
Identities = 20/113 (17%), Positives = 37/113 (32%)
Query: 822 LVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHY 881
++ L+ A++N T LH+A + + LL A + +
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 882 AAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQMTSLSLVRVLTHEAPFV 934
A + LL + H G T L +A ++ +V L +
Sbjct: 64 VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADI 116
Score = 43.2 bits (100), Expect = 6e-05
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 570 VLLLLLHSGASINLT-DNEGNTALHLATNNGHETCVKALIYFN 611
V+ LL GA +N T D G T+LHLA K L+
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAG 46
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 60.6 bits (145), Expect = 2e-11
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 458 TKLFEFARLGDGDKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTTQS 517
KL E AR G D+VR ++ ++ L + + ++ + +
Sbjct: 4 KKLLEAARAGQDDEVRILM-ANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62
Query: 518 MDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHS 577
T LH+AA G +V+++L+ GAD N++D+ + LH+A HQ V+ LL+
Sbjct: 63 RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122
Query: 578 GASINLTDNEGNTALHLATNNGHETCVKAL 607
GA ++ TA ++ +NG+E + L
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 50.6 bits (119), Expect = 6e-08
Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 38/155 (24%)
Query: 524 TVLHVAALYGRIKVVDLVLELGADTNSQDL------------------------------ 553
L AA G+ V +++ GA + L
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63
Query: 554 --CGCSPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFN 611
+PLH AA+ GH N++ +LL GA +N D TALH AT + H+ V+ LI +
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123
Query: 612 EQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLL 646
+++ + + + G + ++L
Sbjct: 124 A------DVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 46.0 bits (107), Expect = 2e-06
Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 30/152 (19%)
Query: 806 DGYTALHIATSLGHYDLVRLLINYRADINI------------------------------ 835
D L A G D VR+L+ A
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60
Query: 836 VTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLL 895
R K + + + +L +VNA+D TALH+A +NH + LL+
Sbjct: 61 DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120
Query: 896 KSGARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
K GA ++ + +T ++ + L +L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 44.8 bits (104), Expect = 6e-06
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 799 NINICNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVR 858
++N + TALH AT H ++V LLI Y AD++ ++ T I+ N N +
Sbjct: 92 DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK-FCKTAFDISIDNGNEDLAE 150
Query: 859 LL 860
+L
Sbjct: 151 IL 152
Score = 40.6 bits (93), Expect = 2e-04
Identities = 13/69 (18%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Query: 758 YFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSL 817
G K ++VVE + D ++ + TA I+
Sbjct: 88 KHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD----VHTQSKFCKTAFDISIDN 143
Query: 818 GHYDLVRLL 826
G+ DL +L
Sbjct: 144 GNEDLAEIL 152
Score = 35.2 bits (79), Expect = 0.012
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 630 PLHAAARWGYTSIIQLLLDHGAN 652
L AAR G +++L+ +GA
Sbjct: 5 KLLEAARAGQDDEVRILMANGAP 27
Score = 29.4 bits (64), Expect = 1.1
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 587 EGNTALHLATNNGHETCVKALI 608
+ L A G + V+ L+
Sbjct: 1 DLGKKLLEAARAGQDDEVRILM 22
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 60.4 bits (145), Expect = 3e-11
Identities = 22/135 (16%), Positives = 52/135 (38%), Gaps = 8/135 (5%)
Query: 773 HPLCQCAKCK--EDVVESESRPV-TDECLNINICNSDGYTALHI---ATSLGHYDLVRLL 826
H LC+ K + ++++ + V E + + + TALH+ + +V L
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 827 INYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINN 886
+ +++ + + + C + + LL + ++ + G T L A
Sbjct: 68 VQNSGNLDK--QTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLK 125
Query: 887 HTNLATLLLKSGARP 901
H + LL ++ +
Sbjct: 126 HEHCEELLTQALSGR 140
Score = 59.2 bits (142), Expect = 6e-11
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 15/123 (12%)
Query: 519 DDRGFTVLHVAAL---YGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLL 575
+ T LH+A + +VD +++ + + Q G + LHY + L LLL
Sbjct: 42 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL 101
Query: 576 HSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAA 635
ASI + + G T L +A HE C + L A++ + +S +H
Sbjct: 102 RGKASIEIANESGETPLDIAKRLKHEHCEELL------------TQALSGRFNSHVHVEY 149
Query: 636 RWG 638
W
Sbjct: 150 EWR 152
Score = 58.4 bits (140), Expect = 1e-10
Identities = 27/138 (19%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 526 LHVAALYGRIKVVDLVLELGADTNSQ------DLCGCSPLHYAA---TRGHQNVLLLLLH 576
L A I + G D + + LH A R +++ L+
Sbjct: 10 LCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ 69
Query: 577 SGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAAR 636
+ +++ +G+TALH + C+K L+ I N G++PL A R
Sbjct: 70 NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS------IEIANESGETPLDIAKR 123
Query: 637 WGYTSIIQLLLDHGANPT 654
+ +LL +
Sbjct: 124 LKHEHCEELLTQALSGRF 141
Score = 51.9 bits (123), Expect = 3e-08
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 805 SDGYTALHI---ATSLGHYDLVRLLINYRADINIVTRVKQ-----LTPLHIACQN---NN 853
+D LH A + D+ + T LH+A ++ +
Sbjct: 1 ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS 60
Query: 854 LSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLH 913
L IV L+ N++ Q +G+TALHY + ++ LLL+ A +I N G+T L
Sbjct: 61 LHIVDFLVQNS-GNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLD 119
Query: 914 MAQQMTSLSLVRVLTH 929
+A+++ +LT
Sbjct: 120 IAKRLKHEHCEELLTQ 135
Score = 39.6 bits (91), Expect = 4e-04
Identities = 13/66 (19%), Positives = 18/66 (27%)
Query: 767 VPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLL 826
+ C + + +I I N G T L IA L H LL
Sbjct: 74 LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELL 133
Query: 827 INYRAD 832
+
Sbjct: 134 TQALSG 139
Score = 35.0 bits (79), Expect = 0.015
Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 3/99 (3%)
Query: 458 TKLFEFARLGDG---DKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPT 514
T L R D V ++Q + C + K +
Sbjct: 47 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS 106
Query: 515 TQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDL 553
+ ++ G T L +A +L+ + + + +
Sbjct: 107 IEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHV 145
Score = 33.8 bits (76), Expect = 0.036
Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 3/67 (4%)
Query: 590 TALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAAR---WGYTSIIQLL 646
+L A + + + + ++ LH A R I+ L
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 647 LDHGANP 653
+ + N
Sbjct: 68 VQNSGNL 74
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 55.3 bits (131), Expect = 2e-09
Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 27/154 (17%)
Query: 524 TVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINL 583
L AA G ++ + +L+ + N+Q+ G + L + LLL
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 584 TDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLN------------------------ 619
A +T L + + + +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 620 ---INAVNNQGDSPLHAAARWGYTSIIQLLLDHG 650
+ N++GD+ A +G ++ L+ +G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 42.6 bits (98), Expect = 4e-05
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 846 HIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSG 898
H+A + +L +V L+ NV ++++G+TA A + + +L+ +G
Sbjct: 104 HLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 42.2 bits (97), Expect = 6e-05
Identities = 13/60 (21%), Positives = 20/60 (33%)
Query: 770 NACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINY 829
+ L KE + V N+ N G TA +A G ++V L+
Sbjct: 96 DNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 41.0 bits (94), Expect = 1e-04
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 877 TALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQM 918
L AA T LL++ +N +G+T L + +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLG 44
Score = 40.3 bits (92), Expect = 3e-04
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 843 TPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNH 887
L A +L + LL NVNAQ+ G TAL + N
Sbjct: 3 NELASAAARGDLEQLTSLLQNN-VNVNAQNGFGRTALQVMKLGNP 46
Score = 40.3 bits (92), Expect = 3e-04
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Query: 460 LFEFARLGDGDKVRAILQEE---NKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTTQ 516
L A GD +++ ++LQ N + L I +
Sbjct: 5 LASAAARGDLEQLTSLLQNNVNVNAQNGFG----RTALQVMKLGNPEIARRLLLRGANPD 60
Query: 517 SMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGH-QNVLLLLL 575
D GF V+H AA G + + +LE AD N +D G PLH AA GH + V L+
Sbjct: 61 LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 120
Query: 576 HSGASINLTDNEGNTALHLATNNGHETCVKALI 608
H+ +++ +++G+TA LA G V +
Sbjct: 121 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 153
Score = 39.1 bits (89), Expect = 6e-04
Identities = 18/150 (12%), Positives = 41/150 (27%), Gaps = 31/150 (20%)
Query: 809 TALHIATSLGHYDLVRLLINYRADINIVTR------------------------------ 838
L A + G + + L+ ++N
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 839 -VKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKS 897
+H A + L ++ LL + + A + + L+ +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 898 GARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
+ +NH G T +A+ +V ++
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLM 152
Score = 37.6 bits (85), Expect = 0.002
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 629 SPLHAAARWGYTSIIQLLLDHGANPTLENKR 659
+ L +AA G + LL + N +N
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGF 33
Score = 35.6 bits (80), Expect = 0.009
Identities = 12/55 (21%), Positives = 21/55 (38%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELG 545
L + + + + + +G T +A LYGR +VV L+ G
Sbjct: 102 PLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 34.9 bits (78), Expect = 0.018
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 843 TPLHIACQNNNLSIVRLLLAA 863
T +A +V L+ A
Sbjct: 135 TACDLARLYGRNEVVSLMQAN 155
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 54.8 bits (130), Expect = 2e-09
Identities = 31/162 (19%), Positives = 52/162 (32%), Gaps = 40/162 (24%)
Query: 521 RGFTVLHVAALYGRIKVV-DLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLH--- 576
R L AA G ++ V L+ ++ + G + L L LL
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGAS 60
Query: 577 -----------------------------SGASINLTDNEGNTALHLATNNGHETCVKAL 607
GA +N+ D G +HLA GH V L
Sbjct: 61 PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120
Query: 608 IYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDH 649
+ +++ + +G +PL A + G ++ +L H
Sbjct: 121 AAES-------DLHRRDARGLTPLELALQRGAQDLVDILQGH 155
Score = 42.1 bits (97), Expect = 7e-05
Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 772 CHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLINYRA 831
+ + + ++N+ + G +H+A GH +V L +
Sbjct: 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S 124
Query: 832 DINIVTRVKQLTPLHIACQNNNLSIVRLLL 861
D++ + LTPL +A Q +V +L
Sbjct: 125 DLHRRDA-RGLTPLELALQRGAQDLVDILQ 153
Score = 41.7 bits (96), Expect = 7e-05
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 864 KQCNVNAQDYRGNTALHYAAINNHTNLATLLL 895
+ +++ +D RG T L A +L +L
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQ 153
Score = 41.7 bits (96), Expect = 8e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 796 ECLNINICNSDGYTALHIATSLGHYDLVRLLIN 828
+++ ++ G T L +A G DLV +L
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 40.2 bits (92), Expect = 3e-04
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 843 TPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNH 887
L A ++ VR LL + + +A + G TAL +
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGST 48
Score = 39.4 bits (90), Expect = 4e-04
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 31/149 (20%)
Query: 558 PLHYAATRGHQNVLLLLLHS-GASINLTDNEGNTALHLATNNGHETCVKA---------- 606
L AA RG + LLH + + G TAL + ++
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64
Query: 607 ----------------LIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHG 650
L ++N + G P+H A + G+T+++ L
Sbjct: 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE- 123
Query: 651 ANPTLENKRKVTPLQNA---NNLHVAKLL 676
++ + R +TPL+ A + +L
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDIL 152
Score = 38.6 bits (88), Expect = 0.001
Identities = 27/152 (17%), Positives = 41/152 (26%), Gaps = 32/152 (21%)
Query: 807 GYTALHIATSLGHYDLVR-LLINYRADINIVTR--------------------------- 838
L A + G VR LL + + R
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 839 ---VKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLL 895
T +L +VN D G +H A HT + + L
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 896 KSGARPQIKNHYGQTCLHMAQQMTSLSLVRVL 927
+ ++ G T L +A Q + LV +L
Sbjct: 122 AE-SDLHRRDARGLTPLELALQRGAQDLVDIL 152
Score = 38.3 bits (87), Expect = 0.001
Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLELGADTNS 550
+ + D G +H+A G VV + +D +
Sbjct: 70 SPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHR 128
Query: 551 QDLCGCSPLHYAATRGHQNVLLLLL 575
+D G +PL A RG Q+++ +L
Sbjct: 129 RDARGLTPLELALQRGAQDLVDILQ 153
Score = 36.7 bits (83), Expect = 0.004
Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Query: 874 RGNTALHYAAINNHTN-LATLLLKSGARPQIKNHYGQTCLHMAQQM 918
R L AA + LL + P N +G+T L +
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFG 46
Score = 33.2 bits (74), Expect = 0.066
Identities = 10/53 (18%), Positives = 18/53 (33%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLE 543
P+ + ++ D RG T L +A G +VD++
Sbjct: 102 ALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQG 154
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 52.4 bits (124), Expect = 1e-08
Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 9/132 (6%)
Query: 524 TVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINL 583
+L ++L G +V ++ D + + G + LH A GH ++ L+ G ++N
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 584 TDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNN---QGDSPLHAAARWGYT 640
D++G T LH A + + K L+ + A+ Q + GYT
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGA------AVFAMTYSDMQTAADKCEEMEEGYT 116
Query: 641 SIIQLLLDHGAN 652
Q L
Sbjct: 117 QCSQFLYGVQEK 128
Score = 45.4 bits (106), Expect = 3e-06
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 3/128 (2%)
Query: 457 LTKLFEFARLGDGDKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTTQ 516
L L + + G+ D V+ I+ E + + + I Q
Sbjct: 2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN 61
Query: 517 SMDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQ---DLCGCSPLHYAATRGHQNVLLL 573
+ D G+T LH AA ++V ++E GA + D+ + G+
Sbjct: 62 AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121
Query: 574 LLHSGASI 581
L +
Sbjct: 122 LYGVQEKM 129
Score = 43.1 bits (100), Expect = 1e-05
Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 4/125 (3%)
Query: 743 LFALIENNEIKLIKSYFGLSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINI 802
L E L++ + + + + + +N+N
Sbjct: 5 LLDSSLEGEFDLVQRI--IYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 803 CNSDGYTALHIATSLGHYDLVRLLINYRADINIVTRVKQLTP--LHIACQNNNLSIVRLL 860
+SDG+T LH A S + + + L+ A + +T T + + L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 861 LAAKQ 865
++
Sbjct: 123 YGVQE 127
Score = 41.6 bits (96), Expect = 6e-05
Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 12/126 (9%)
Query: 557 SPLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVL 616
+ L ++ G +++ +++ +L ++ T + C
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPND------EGITALHNAVCAGHTEIVKFLVQF 56
Query: 617 NLNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANP-TLENKRKVTPLQNA-----NNL 670
+N+NA ++ G +PLH AA + + L++ GA + T
Sbjct: 57 GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 116
Query: 671 HVAKLL 676
++ L
Sbjct: 117 QCSQFL 122
Score = 40.0 bits (92), Expect = 2e-04
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 809 TALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNV 868
L ++ G +DLV+ +I D ++ + C + + L NV
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKF--LVQFGVNV 60
Query: 869 NAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHY-GQTCLHMA 915
NA D G T LH AA N+ + L++SGA + QT
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 108
Score = 33.5 bits (75), Expect = 0.040
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 842 LTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLLKSGARP 901
L L + +V+ ++ + + + + G TALH A HT + L++ G
Sbjct: 2 LALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV 60
Query: 902 QIKNHYGQTCLHMAQQMTSLSLVRVL 927
+ G T LH A ++ + + L
Sbjct: 61 NAADSDGWTPLHCAASCNNVQVCKFL 86
Score = 32.3 bits (72), Expect = 0.098
Identities = 6/38 (15%), Positives = 13/38 (34%), Gaps = 3/38 (7%)
Query: 799 NIN-ICNSDGYTALHIATSL--GHYDLVRLLINYRADI 833
+ + SD TA + G+ + L + +
Sbjct: 92 AVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 49.6 bits (116), Expect = 1e-07
Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 6/129 (4%)
Query: 520 DRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGA 579
+ L AA GR++ V +LE GA+ N+ + G P+ +
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARV------AELL 54
Query: 580 SINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGY 639
++ + L L ++ + G P+ A G+
Sbjct: 55 LLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGH 114
Query: 640 TSIIQLLLD 648
+ + L
Sbjct: 115 RDVARYLRA 123
Score = 42.6 bits (98), Expect = 3e-05
Identities = 17/122 (13%), Positives = 30/122 (24%), Gaps = 31/122 (25%)
Query: 807 GYTALHIATSLGHYDLVRLLINYRADINI------------------------------- 835
L A + G + VR L+ A+ N
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 836 VTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNVNAQDYRGNTALHYAAINNHTNLATLLL 895
LT ++L ++ +D G + A H ++A L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Query: 896 KS 897
+
Sbjct: 123 AA 124
Score = 36.1 bits (81), Expect = 0.004
Identities = 8/57 (14%), Positives = 18/57 (31%)
Query: 772 CHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLLIN 828
+ + +++ ++ G + +A LGH D+ R L
Sbjct: 67 ATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123
Score = 33.0 bits (73), Expect = 0.052
Identities = 11/44 (25%), Positives = 16/44 (36%)
Query: 875 GNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQM 918
L AA LL++GA P N YG+ + +
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMG 46
Score = 30.3 bits (66), Expect = 0.41
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 627 GDSPLHAAARWGYTSIIQLLLDHGANP 653
L AA G ++ LL+ GANP
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANP 29
Score = 28.4 bits (61), Expect = 1.8
Identities = 5/53 (9%), Positives = 13/53 (24%)
Query: 491 CHPLCSCDDCEEAINLKHSQSKPTTQSMDDRGFTVLHVAALYGRIKVVDLVLE 543
+ + + ++ D G + +A G V +
Sbjct: 71 RPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 34.5 bits (77), Expect = 0.014
Identities = 25/109 (22%), Positives = 35/109 (32%), Gaps = 2/109 (1%)
Query: 809 TALHIATSLGHYDLVRLLINYRADINIVTRVKQLTPLHIACQNNNLSIVRLLLAAKQCNV 868
A G D V+ + D+N + + A + L K ++
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEF--LLLKGADI 61
Query: 869 NAQDYRGNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQ 917
NA D T L A H + LLL GA +K G T L
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDN 110
Score = 34.1 bits (76), Expect = 0.021
Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
Query: 558 PLHYAATRGHQNVLLLLLHSGASINLTDNEGNTALHLATNNGHETCVKALIYFNEQEVLN 617
+A G + + + ++ T + L +
Sbjct: 5 EFMWALKNGDLDEVKDYVAK------GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 58
Query: 618 LNINAVNNQGDSPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNANNLHVAKLL 676
+INA + +PL +A G+ S ++LLL GA+ T++ +T L+ +N + LL
Sbjct: 59 ADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALL 117
Score = 33.0 bits (73), Expect = 0.047
Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 3/117 (2%)
Query: 458 TKLFEFARLGDGDKVRAILQEENKKEDSESLPLCHPLCSCDDCEEAINLKHSQSKPTTQS 517
+ + GD D+V+ + + + + D + I +
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 518 MDDRGFTVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLL 574
D T L A G + V L+L GAD + G + L +Q + LL
Sbjct: 64 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD---NQAIKALL 117
Score = 30.3 bits (66), Expect = 0.39
Identities = 35/121 (28%), Positives = 44/121 (36%), Gaps = 6/121 (4%)
Query: 524 TVLHVAALYGRIKVVDLVLELGADTNSQDLCGCSPLHYAATRGHQNVLLLLLHSGASINL 583
A G + V + G D N G PLHYAA G +L LL GA IN
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 584 TDNEGNTALHLATNNGHETCVKALIYFNEQEVLNLNINAVNNQGDSPLHAAARWGYTSII 643
D T L A GH +CVK L+ G + L A +++
Sbjct: 64 PDKHHITPLLSAVYEGHVSCVKLLLSKGAD------KTVKGPDGLTALEATDNQAIKALL 117
Query: 644 Q 644
Q
Sbjct: 118 Q 118
Score = 29.1 bits (63), Expect = 1.0
Identities = 7/44 (15%), Positives = 12/44 (27%)
Query: 875 GNTALHYAAINNHTNLATLLLKSGARPQIKNHYGQTCLHMAQQM 918
+ +A N + + G G+ LH A
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADC 45
Score = 27.6 bits (59), Expect = 3.8
Identities = 3/23 (13%), Positives = 7/23 (30%)
Query: 627 GDSPLHAAARWGYTSIIQLLLDH 649
D A + G ++ +
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAK 24
Score = 27.2 bits (58), Expect = 4.1
Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Query: 767 VPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGYTALHIATSLGHYDLVRLL 826
+ H + + S + + + + + DG TAL ++ L
Sbjct: 61 INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT----DNQAIKAL 116
Query: 827 I 827
+
Sbjct: 117 L 117
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 29.4 bits (65), Expect = 0.97
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 629 SPLHAAARWGYTSIIQLLLDHGANPTLENKRKVTPLQNA--NNLHVAKLLNAYVHKPKPL 686
S H + ++ + N N+ ++ PL+ + +L +K
Sbjct: 48 SRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAE 107
Query: 687 YNYLVPKEKVSR--PPSPP 703
Y Y V +E P P
Sbjct: 108 YEYEVTEEDWETIYPCLSP 126
>d1g9ga_ a.102.1.2 (A:) Processive endocellulase CelF (Cel48F)
{Clostridium cellulolyticum [TaxId: 1521]}
Length = 629
Score = 28.2 bits (63), Expect = 4.8
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 173 LWTESKGKEIFEKMDEAIKMFLLTNDQFEYNPFDK 207
W + +GK + + +A KM D Y+ FDK
Sbjct: 244 QWAKEQGKSVSTSVGKATKM----GDYLRYSFFDK 274
>d2bvla1 c.68.1.22 (A:1-542) Toxin B {Clostridium difficile [TaxId:
1496]}
Length = 542
Score = 28.0 bits (62), Expect = 6.6
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 179 GKEIFEKMDEAIKMFLLTNDQFEYNPF-DKQKYLVEKLYQNCLNICLKDNKLRQSISINK 237
G +I + I + N + N F D +L+ L + + + D ++N
Sbjct: 104 GGQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINTLKKTVVESAINDTLESFRENLND 163
Query: 238 YLIDSIKLAVETY 250
D K +
Sbjct: 164 PRFDYNKFFRKRM 176
>d1l5pa_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Trichomonas vaginalis
[TaxId: 5722]}
Length = 93
Score = 26.1 bits (57), Expect = 7.3
Identities = 7/48 (14%), Positives = 10/48 (20%)
Query: 761 LSNEEKVPDNACHPLCQCAKCKEDVVESESRPVTDECLNINICNSDGY 808
D+ C C KC V + D+
Sbjct: 27 TEAGLMSADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANA 74
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.394
Gapped
Lambda K H
0.267 0.0483 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,367,896
Number of extensions: 160114
Number of successful extensions: 870
Number of sequences better than 10.0: 1
Number of HSP's gapped: 592
Number of HSP's successfully gapped: 227
Length of query: 936
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 842
Effective length of database: 1,116,976
Effective search space: 940493792
Effective search space used: 940493792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.3 bits)