BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8455
(101 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1MIL|A Chain A, Transforming Protein
Length = 104
Score = 113 bits (283), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 61/77 (79%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
+GDFLVRES +PGQYVLTG Q G KHLLL+DPEGVVRTKD FESVSHL++YH N L
Sbjct: 26 NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 85
Query: 74 PIISAESALILRNPVAK 90
PIISA S L L+ PV +
Sbjct: 86 PIISAGSELCLQQPVER 102
>pdb|1TCE|A Chain A, Solution Nmr Structure Of The Shc Sh2 Domain Complexed
With A Tyrosine-Phosphorylated Peptide From The T-Cell
Receptor, Minimized Average Structure
Length = 107
Score = 113 bits (283), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 61/77 (79%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
+GDFLVRES +PGQYVLTG Q G KHLLL+DPEGVVRTKD FESVSHL++YH N L
Sbjct: 26 NGDFLVRESTTTPGQYVLTGSQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHL 85
Query: 74 PIISAESALILRNPVAK 90
PIISA S L L+ PV +
Sbjct: 86 PIISAGSELCLQQPVER 102
>pdb|2KK6|A Chain A, Solution Structure Of Sh2 Domain Of Proto-Oncogene
Tyrosine- Protein Kinase Fer From Homo Sapiens,
Northeast Structural Genomics Consortium (Nesg) Target
Hr3461d
Length = 116
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
++ GDFLVRES G PG+YVL+ Y G ++H ++ + + R + F ++ L+++H
Sbjct: 34 KKQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRFEGTGFSNIPQLIDHHYTT 93
Query: 72 QLPIISAESALILRNPVAK 90
+ +I+ +S ++L NP+ K
Sbjct: 94 K-QVITKKSGVVLLNPIPK 111
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLP 74
GDFLVRESQG +YVL+ G +H ++ + + R + F S+ L+++ Q P
Sbjct: 33 GDFLVRESQGK-QEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQP 91
Query: 75 IISAESALILRNPVAK 90
++ +S ++L V K
Sbjct: 92 -LTKKSGVVLHRAVPK 106
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLP 74
GDFLVRESQG +YVL+ G +H ++ + + R + F S+ L+++ Q P
Sbjct: 33 GDFLVRESQGK-QEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQP 91
Query: 75 IISAESALILRNPVAK 90
++ +S ++L V K
Sbjct: 92 -LTKKSGVVLHRAVPK 106
>pdb|1WQU|A Chain A, Solution Structure Of The Human Fes Sh2 Domain
pdb|2DCR|A Chain A, Fully Automated Solution Structure Determination Of The
Fes Sh2 Domain
Length = 114
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLP 74
GDFLVRESQG +YVL+ G +H ++ + + R + F S+ L+++ Q P
Sbjct: 36 GDFLVRESQGK-QEYVLSVLWDGLPRHFIIQSLDNLYRLEGEGFPSIPLLIDHLLSTQQP 94
Query: 75 IISAESALILRNPV 88
++ +S ++L V
Sbjct: 95 -LTKKSGVVLHRAV 107
>pdb|2LCT|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With
A Syk-Derived Doubly Phosphorylated Peptide
Length = 107
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 5 AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMFESVSH 63
A++ +R DG FLVR+ ++ ++ KH+ ++ EG+ R T+ + F ++
Sbjct: 21 AESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTE 80
Query: 64 LVNYHCQNQL 73
LV ++ QN L
Sbjct: 81 LVEFYQQNSL 90
>pdb|2DLY|A Chain A, Solution Structure Of The Sh2 Domain Of Murine
Fyn-Related Kinase
Length = 121
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 9 FPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVN 66
+ Q G FL+RES+ G + L+ G KH + +D G T+ ++F +++ VN
Sbjct: 34 YSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVN 93
Query: 67 YH 68
Y+
Sbjct: 94 YY 95
>pdb|1JYQ|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A
Highly Affine Phospho Peptide
pdb|1JYQ|B Chain B, Xray Structure Of Grb2 Sh2 Domain Complexed With A
Highly Affine Phospho Peptide
pdb|1JYR|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A
Phosphorylated Peptide
pdb|1JYU|A Chain A, Xray Structure Of Grb2 Sh2 Domain
Length = 96
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYH 68
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 23 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 80
>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto-
Oncogene Protein Vav1
pdb|2ROR|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A
Tyrosine-Phosphorylated Peptide From Slp76
Length = 138
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 5 AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR-TKDRMFESVSH 63
A++ +R DG FLVR+ ++ ++ KH+ ++ EG+ R T+ + F ++
Sbjct: 38 AESILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTE 97
Query: 64 LVNYHCQNQL 73
LV ++ QN L
Sbjct: 98 LVEFYQQNSL 107
>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2
Domain Complexed With Phosphotyrosyl Heptapeptide
Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2)
pdb|3N7Y|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 20-Membered Macrocyclic Ligand Having The Sequence
Pyvnv
pdb|3N7Y|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 20-Membered Macrocyclic Ligand Having The Sequence
Pyvnv
pdb|3N7Y|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 20-Membered Macrocyclic Ligand Having The Sequence
Pyvnv
Length = 98
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 24 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 83
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 84 TS---VSRNQQIFLRD 96
>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes
Reveal A Conformational Switch And Their Functional
Implications.
pdb|3MXY|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes
Reveal A Conformational Switch And Their Functional
Implications
Length = 101
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 27 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 86
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 87 TS---VSRNQQIFLRD 99
>pdb|1CJ1|A Chain A, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|B Chain B, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|C Chain C, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|D Chain D, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|F Chain F, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|G Chain G, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|H Chain H, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|I Chain I, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|J Chain J, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|K Chain K, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|L Chain L, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
Length = 96
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 22 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 81
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 82 TS---VSRNQQIFLRD 94
>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOA|B Chain B, Crystal Structures Of A High-affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|A Chain A, Crystal Structures Of A High-Affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|B Chain B, Crystal Structures Of A High-Affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|C Chain C, Crystal Structures Of A High-Affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|D Chain D, Crystal Structures Of A High-Affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
Length = 99
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 24 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 83
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 84 TS---VSRNQQIFLRD 96
>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
Complexed With A Phosphotyrosyl Pentapeptide
Length = 98
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 23 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 82
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 83 TS---VSRNQQIFLRD 95
>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|D Chain D, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|E Chain E, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|F Chain F, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
Length = 112
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 27 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 86
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 87 TS---VSRNQQIFLRD 99
>pdb|1GHU|A Chain A, Nmr Solution Structure Of Growth Factor Receptor-Bound
Protein 2 (Grb2) Sh2 Domain, 24 Structures
Length = 107
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYH 68
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 21 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 78
>pdb|1X0N|A Chain A, Nmr Structure Of Growth Factor Receptor Binding Protein
Sh2 Domain Complexed With The Inhibitor
pdb|1QG1|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
Complexed With An Shc-Derived Peptide
Length = 104
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 23 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 82
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 83 TS---VSRNQQIFLRD 95
>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src
Homology Domain-2 Of The Growth Factor Receptor Bound
Protein-2, Nmr, 18 Structures
Length = 112
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 27 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 86
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 87 TS---VSRNQQIFLRD 99
>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Pyxn- Derived Tripeptide
Length = 117
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 26 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 85
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 86 TS---VSRNQQIFLRD 98
>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IMD|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IMJ|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Cyclopropyl-Constrained Ac-Ptyr-Ile-Asn-Nh2
Tripeptide Mimic
pdb|3IMJ|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Cyclopropyl-Constrained Ac-Ptyr-Ile-Asn-Nh2
Tripeptide Mimic
pdb|3IN7|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Cyclopropyl-Constrained Ac-Py-Q-N-Nh2 Tripeptide
Mimic
pdb|3IN7|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Cyclopropyl-Constrained Ac-Py-Q-N-Nh2 Tripeptide
Mimic
pdb|3IN8|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Flexible Ac-Ptyr-Ile-Asn-Nh2 Tripeptide Mimic
pdb|3KFJ|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Flexible Ac-py-e-n-nh2 Tripeptide Mimic
pdb|3N8M|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
An Acyclic Ligand Having The Sequence Pyvnvp
pdb|3OV1|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Pyxn- Derived Tripeptide
pdb|3S8L|A Chain A, Protein-Ligand Interactions: Thermodynamic Effects
Associated With Increasing Hydrophobic Surface Area
pdb|3S8N|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Pyxn- Derived Tripeptide
pdb|3S8O|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Pyxn- Derived Tripeptide
Length = 117
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 26 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 85
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 86 TS---VSRNQQIFLRD 98
>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974)
Length = 123
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 33 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 92
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 93 TS---VSRNQQIFLRD 105
>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With
Cyclo-[n-Alpha-Acetyl-L-Thi
Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl]
(Pkf273-791)
Length = 117
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 32 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 91
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 92 TS---VSRNQQIFLRD 104
>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|B Chain B, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|C Chain C, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|D Chain D, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
Length = 114
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 31 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 90
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 91 TS---VSRNQQIFLRD 103
>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The
Grb2 Sh2 Domain
pdb|2H5K|A Chain A, Crystal Structure Of Complex Between The Domain-Swapped
Dimeric Grb2 Sh2 Domain And Shc-Derived Ligand,
Ac-Nh-Ptyr-Val-Asn-Nh2
pdb|2H5K|B Chain B, Crystal Structure Of Complex Between The Domain-Swapped
Dimeric Grb2 Sh2 Domain And Shc-Derived Ligand,
Ac-Nh-Ptyr-Val-Asn-Nh2
pdb|2HUW|A Chain A, X-Ray Crystal Structure Of The Grb2 Sh2 Domain Complexed
To A Constrained And Cyclopropane-Derived Ligand
pdb|2HUW|B Chain B, X-Ray Crystal Structure Of The Grb2 Sh2 Domain Complexed
To A Constrained And Cyclopropane-Derived Ligand
pdb|3C7I|A Chain A, X-Ray Crystal Structure Of The Complex Between The
Grb2-Sh2 Domain And A Flexible Ligand, Fptvn
Length = 116
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQ 70
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 26 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRS 85
Query: 71 NQLPIISAESALILRN 86
+S + LR+
Sbjct: 86 TS---VSRNQQIFLRD 98
>pdb|1GRI|A Chain A, Grb2
pdb|1GRI|B Chain B, Grb2
Length = 217
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYH 68
R DG FL+RES+ +PG + L+ G +H +L D G F S++ LV+YH
Sbjct: 78 RHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYH 135
>pdb|2CI8|A Chain A, Sh2 Domain Of Human Nck1 Adaptor Protein - Uncomplexed
Length = 99
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 5 AKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSH 63
A+ A R +GDFL+R+S+ SP + ++ G KH + E V R F ++
Sbjct: 13 AEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQRKFSTMEE 72
Query: 64 LVNYHCQNQLPIISAE 79
LV ++ + PI ++E
Sbjct: 73 LVEHY--KKAPIFTSE 86
>pdb|3GQI|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 226
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG-----VVRTKDRMFESVSHLVNYH 68
DG FLVRES+ G Y L+ ++ G +H + + T + +F+S+ L+ ++
Sbjct: 36 DGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHY 95
Query: 69 CQNQLPIISAESALILRNPVAKCATGAHTGQSL 101
Q+P+ E + L PV + T AH +
Sbjct: 96 --QQVPLRCNEFEMRLSEPVPQ--TNAHESKEW 124
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
+DG FLVR+ + P Y ++ G KH + V + F+S+ L++Y+ ++
Sbjct: 143 RDGAFLVRK-RNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHP 201
Query: 73 LPIISAESALILRNPVAKCA 92
L + LR P+ + A
Sbjct: 202 L-----YRKMKLRYPINEEA 216
>pdb|2CI9|A Chain A, Nck1 Sh2-Domain In Complex With A Dodecaphosphopeptide
From Epec Protein Tir
pdb|2CI9|B Chain B, Nck1 Sh2-Domain In Complex With A Dodecaphosphopeptide
From Epec Protein Tir
Length = 102
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 5 AKTAFPSR-QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSH 63
A+ A R +GDFL+R+S+ SP + ++ G KH + E V R F ++
Sbjct: 17 AEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQRKFSTMEE 76
Query: 64 LVNYHCQNQLPIISAE 79
LV ++ + PI ++E
Sbjct: 77 LVEHY--KKAPIFTSE 90
>pdb|4EY0|A Chain A, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|B Chain B, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|C Chain C, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|D Chain D, Structure Of Tandem Sh2 Domains From Plcgamma1
Length = 246
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG-----VVRTKDRMFESVSHLVNYH 68
DG FLVRES+ G Y L+ ++ G +H + + T + +F+S+ L+ ++
Sbjct: 36 DGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHY 95
Query: 69 CQNQLPIISAESALILRNPVAKCATGAHTGQSL 101
Q+P+ E + L PV + T AH +
Sbjct: 96 --QQVPLRCNEFEMRLSEPVPQ--TNAHESKEW 124
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
+DG FLVR+ + P Y ++ G KH + V + F+S+ L++Y+ ++
Sbjct: 143 RDGAFLVRK-RNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHP 201
Query: 73 LPIISAESALILRNPVAKCA 92
L + LR P+ + A
Sbjct: 202 L-----YRKMKLRYPINEEA 216
>pdb|1RQQ|C Chain C, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|D Chain D, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
Length = 114
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL-IDPEGVVRTKDRMFESVSHLVNYHCQ 70
R G F++R+S+ PG+ VLT G KHL L ++ G + F+SV ++ +
Sbjct: 33 RSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHFHT 92
Query: 71 NQLPIISAESA-LILRNPV 88
+ +P+ S SA + LR+ V
Sbjct: 93 HPIPLESGGSADITLRSYV 111
>pdb|4FBN|A Chain A, Insights Into Structural Integration Of The Plcgamma
Regulatory Region And Mechanism Of Autoinhibition And
Activation Based On Key Roles Of Sh2 Domains
Length = 246
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEG-----VVRTKDRMFESVSHLVNYH 68
DG FLVRES+ G Y L+ ++ G +H + + T + +F+S+ L+ ++
Sbjct: 36 DGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHY 95
Query: 69 CQNQLPIISAESALILRNPVAKCATGAHTGQSL 101
Q+P+ E + L PV + T AH +
Sbjct: 96 --QQVPLRCNEFEMRLSEPVPQ--TNAHESKEW 124
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
+DG FLVR+ + P Y ++ G KH + V + F+S+ L++Y+ ++
Sbjct: 143 RDGAFLVRK-RNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHP 201
Query: 73 LPIISAESALILRNPVAKCA 92
L + LR P+ + A
Sbjct: 202 L-----YRKMKLRYPINEEA 216
>pdb|1Z3K|A Chain A, Structural Insight Into The Binding Diversity Between
The Tyr-Phosphorylated Human Ephrinbs And Nck2 Sh2
Domain
Length = 98
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
+GDFL+R+S+ SP + ++ G KH + + V R F ++ LV ++ +
Sbjct: 23 EGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHY--KKA 80
Query: 74 PIISAE 79
PI ++E
Sbjct: 81 PIFTSE 86
>pdb|2DX0|A Chain A, Crystal Structure Of The N-Terminal Sh2 Domain Of Mouse
Phospholipase C-Gamma 2
pdb|2DX0|B Chain B, Crystal Structure Of The N-Terminal Sh2 Domain Of Mouse
Phospholipase C-Gamma 2
Length = 138
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLID--PEGVVR---TKDRMFESVSHLVNY 67
+DG FLVRES+ P Y L+ ++ G +H + GV++ T + F S+ L+ +
Sbjct: 49 KDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQH 108
Query: 68 HCQNQLPIISAESALILRNPV 88
+ + L AE L L +PV
Sbjct: 109 YREAHLRC--AEFELRLTDPV 127
>pdb|2CIA|A Chain A, Human Nck2 Sh2-Domain In Complex With A
Decaphosphopeptide From Translocated Intimin Receptor
(Tir) Of Epec
Length = 102
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
+GDFL+R+S+ SP + ++ G KH + + V R F ++ LV ++ +
Sbjct: 27 EGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHY--KKA 84
Query: 74 PIISAE 79
PI ++E
Sbjct: 85 PIFTSE 90
>pdb|2ECD|A Chain A, Solution Structure Of The Human Abl2 Sh2 Domain
Length = 119
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG-VVRTKDRMFESVSHLVNYHCQN 71
+G FLVRES+ SPGQ ++ Y+G + + +G V T + F +++ LV++H
Sbjct: 37 NGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVHHHSTV 96
Query: 72 QLPIISAESALILRNPVAKC 91
+++ L P KC
Sbjct: 97 ADGLVT-----TLHYPAPKC 111
>pdb|1RPY|A Chain A, Crystal Structure Of The Dimeric Sh2 Domain Of Aps
pdb|1RPY|B Chain B, Crystal Structure Of The Dimeric Sh2 Domain Of Aps
Length = 114
Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 12 RQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL-IDPEGVVRTKDRMFESVSHLVNYHCQ 70
R G F++R+S+ PG+ VLT G KHL L ++ G + F+SV + +
Sbjct: 33 RSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDXLRHFHT 92
Query: 71 NQLPIISAESA-LILRNPV 88
+ +P+ S SA + LR+ V
Sbjct: 93 HPIPLESGGSADITLRSYV 111
>pdb|2GE9|A Chain A, Solution Structures Of The Sh2 Domain Of Bruton's Tyrosine
Kinase
Length = 125
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 26/92 (28%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVR--------------TKDRMF 58
++G F+VR+S + G+Y ++ + T DP+GV+R + +F
Sbjct: 32 KEGGFIVRDSSKA-GKYTVSVFAKSTG------DPQGVIRHYVVCSTPQSQYYLAEKHLF 84
Query: 59 ESVSHLVNYHCQNQLPIISAESALILRNPVAK 90
++ L+NYH N +IS L+ PV++
Sbjct: 85 STIPELINYHQHNSAGLISR-----LKYPVSQ 111
>pdb|2HDV|A Chain A, Crystal Structure Of The Src Homology-2 Domain Of The
Adapter Protein Sh2-B
pdb|2HDV|B Chain B, Crystal Structure Of The Src Homology-2 Domain Of The
Adapter Protein Sh2-B
pdb|2HDX|A Chain A, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|B Chain B, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|C Chain C, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|D Chain D, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|E Chain E, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|F Chain F, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
Length = 111
Score = 32.3 bits (72), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLL-IDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
G FLVR+S+ G+ VLT G KHL L ++ G R + F+S+ ++ + + +
Sbjct: 34 GVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEHFRVHPI 93
Query: 74 PIISAESA 81
P+ S S+
Sbjct: 94 PLESGGSS 101
>pdb|2AUG|A Chain A, Crystal Structure Of The Grb14 Sh2 Domain
pdb|2AUG|B Chain B, Crystal Structure Of The Grb14 Sh2 Domain
Length = 126
Score = 32.3 bits (72), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPE 48
DG FLVR+SQ +P +VL+ G KH +I E
Sbjct: 49 DGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVE 83
>pdb|4F59|A Chain A, Triple Mutant Src Sh2 Domain
pdb|4F5A|A Chain A, Triple Mutant Src Sh2 Domain Bound To Phosphate Ion
pdb|4F5B|A Chain A, Triple Mutant Src Sh2 Domain Bound To Phosphotyrosine
Length = 112
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ G Y L+ +G KH L+ +D G T F S+ LV Y
Sbjct: 33 GTFLVRESETVKGAYALSVSDFDNAKGLNVKHYLIRKLDSGGFYITSRTQFNSLQQLVAY 92
Query: 68 HCQN 71
+ ++
Sbjct: 93 YSKH 96
>pdb|3T04|A Chain A, Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN
COMPLEX
pdb|3UYO|A Chain A, Crystal Structure Of Monobody Sh13ABL1 SH2 DOMAIN
COMPLEX
Length = 123
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG-VVRTKDRMFESVSHLVNYHC 69
+G FLVRES+ SPGQ ++ Y+G + + +G + + + F +++ LV++H
Sbjct: 37 NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 94
>pdb|3K2M|A Chain A, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
pdb|3K2M|B Chain B, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
Length = 112
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG-VVRTKDRMFESVSHLVNYHC 69
+G FLVRES+ SPGQ ++ Y+G + + +G + + + F +++ LV++H
Sbjct: 26 NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 83
>pdb|3PQZ|A Chain A, Grb7 Sh2 With Peptide
pdb|3PQZ|B Chain B, Grb7 Sh2 With Peptide
pdb|3PQZ|C Chain C, Grb7 Sh2 With Peptide
pdb|3PQZ|D Chain D, Grb7 Sh2 With Peptide
Length = 117
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRM------FESVSHLVNY 67
DG FLVRESQ +P +VL+ KH L++ E R M F + LV +
Sbjct: 37 DGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEF 96
Query: 68 HCQNQ 72
H N+
Sbjct: 97 HQLNR 101
>pdb|2EO3|A Chain A, Solution Structure Of The Sh2 Domain From Human Crk-Like
Protein
Length = 111
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 5 AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLID-PEGVVRTKDRMFESVSH 63
A+T ++ G FLVR+S PG YVL+ + H ++ P + D+ F+ +
Sbjct: 31 AQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPA 90
Query: 64 LVNYH 68
L+ ++
Sbjct: 91 LLEFY 95
>pdb|1AB2|A Chain A, Three-Dimensional Solution Structure Of The Src Homology
2 Domain Of C-Abl
Length = 109
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG-VVRTKDRMFESVSHLVNYHC 69
+G FLVRES+ SPGQ ++ Y+G + + +G + + + F +++ LV++H
Sbjct: 30 NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 87
>pdb|1MW4|A Chain A, Solution Structure Of The Human Grb7-Sh2 Domain In Complex
With A 10 Amino Acid Peptide Py1139
pdb|2QMS|A Chain A, Crystal Structure Of A Signaling Molecule
pdb|2QMS|B Chain B, Crystal Structure Of A Signaling Molecule
pdb|2QMS|C Chain C, Crystal Structure Of A Signaling Molecule
pdb|2QMS|D Chain D, Crystal Structure Of A Signaling Molecule
pdb|2L4K|A Chain A, Water Refined Solution Structure Of The Human Grb7-Sh2
Domain In Complex With The 10 Amino Acid Peptide Py1139
Length = 120
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRM------FESVSHLVNY 67
DG FLVRESQ +P +VL+ KH L++ E R M F + LV +
Sbjct: 40 DGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEF 99
Query: 68 HCQNQ 72
H N+
Sbjct: 100 HQLNR 104
>pdb|2C9W|A Chain A, Crystal Structure Of Socs-2 In Complex With Elongin-B And
Elongin-C At 1.9a Resolution
Length = 169
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 20/80 (25%)
Query: 5 AKTAFPSRQDGDFLVRESQGSPGQYVLT--------------GYQGGTKKHLLLIDPEGV 50
AK +G FL+R+S S Y+LT YQ G + +D
Sbjct: 29 AKEKLKEAPEGTFLIRDSSHS--DYLLTISVKTSAGPTNLRIEYQDGKFR----LDSIIC 82
Query: 51 VRTKDRMFESVSHLVNYHCQ 70
V++K + F+SV HL++Y+ Q
Sbjct: 83 VKSKLKQFDSVVHLIDYYVQ 102
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG-VVRTKDRMFESVSHLVNYH 68
+G FLVRES+ SPGQ ++ Y+G + + +G + + + F +++ LV++H
Sbjct: 126 NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHH 182
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG-VVRTKDRMFESVSHLVNYH 68
+G FLVRES+ SPGQ ++ Y+G + + +G + + + F +++ LV++H
Sbjct: 165 NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHH 221
>pdb|1BKM|A Chain A, Cocrystal Structure Of D-Amino Acid Substituted
Phosphopeptide Complex
Length = 113
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G T F S+
Sbjct: 23 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ 82
Query: 63 HLVNYHCQN 71
LV Y+ ++
Sbjct: 83 QLVAYYSKH 91
>pdb|2ABL|A Chain A, Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine Kinase
Length = 163
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG-VVRTKDRMFESVSHLVNYHC 69
+G FLVRES+ SPGQ ++ Y+G + + +G + + + F +++ LV++H
Sbjct: 91 NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 148
>pdb|1NZL|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyepyipi
pdb|1NZL|B Chain B, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyepyipi
pdb|1NZV|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyipyvpa
pdb|1NZV|B Chain B, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyipyvpa
Length = 103
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G T F S+
Sbjct: 21 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ 80
Query: 63 HLVNYH 68
LV Y+
Sbjct: 81 QLVAYY 86
>pdb|1BKL|A Chain A, Self-Associated Apo Src Sh2 Domain
Length = 113
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G T F S+
Sbjct: 23 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ 82
Query: 63 HLVNYHCQN 71
LV Y+ ++
Sbjct: 83 QLVAYYSKH 91
>pdb|1SHA|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition
Domain Sh2 Of V-Src Complexed With
Tyrosine-Phosphorylated Peptides
pdb|1SHB|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition
Domain Sh2 Of V-Src Complexed With
Tyrosine-Phosphorylated Peptides
pdb|1SPR|A Chain A, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|B Chain B, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|C Chain C, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|D Chain D, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|A Chain A, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|B Chain B, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|C Chain C, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
Length = 104
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G T F S+
Sbjct: 22 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ 81
Query: 63 HLVNYH 68
LV Y+
Sbjct: 82 QLVAYY 87
>pdb|1P13|A Chain A, Crystal Structure Of The Src Sh2 Domain Complexed With
Peptide (Sdpyanfk)
pdb|1P13|B Chain B, Crystal Structure Of The Src Sh2 Domain Complexed With
Peptide (Sdpyanfk)
Length = 102
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G T F S+
Sbjct: 21 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ 80
Query: 63 HLVNYH 68
LV Y+
Sbjct: 81 QLVAYY 86
>pdb|1IS0|A Chain A, Crystal Structure Of A Complex Of The Src Sh2 Domain
With Conformationally Constrained Peptide Inhibitor
pdb|1IS0|B Chain B, Crystal Structure Of A Complex Of The Src Sh2 Domain
With Conformationally Constrained Peptide Inhibitor
pdb|2JYQ|A Chain A, Nmr Structure Of The Apo V-Src Sh2 Domain
Length = 106
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G T F S+
Sbjct: 22 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ 81
Query: 63 HLVNYH 68
LV Y+
Sbjct: 82 QLVAYY 87
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 14 DGDFLVRESQGSPGQYVLT-GYQGGTKKHLLLIDPEG-VVRTKDRMFESVSHLVNYH 68
+G FLVRES+ SPGQ ++ Y+G + + +G + + + F +++ LV++H
Sbjct: 123 NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHH 179
>pdb|1SKJ|A Chain A, Cocrystal Structure Of Urea-Substituted Phosphopeptide
Complex
Length = 113
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G T F S+
Sbjct: 23 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ 82
Query: 63 HLVNYHCQN 71
LV Y+ ++
Sbjct: 83 QLVAYYSKH 91
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G T F S+
Sbjct: 85 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ 144
Query: 63 HLVNYHCQN 71
LV Y+ ++
Sbjct: 145 QLVAYYSKH 153
>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl
Length = 303
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 5 AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLID-PEGVVRTKDRMFESVSH 63
A+T ++ G FLVR+S PG YVL+ + H ++ P + D+ F+ +
Sbjct: 24 AQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPA 83
Query: 64 LVNYH 68
L+ ++
Sbjct: 84 LLEFY 88
>pdb|2LQN|A Chain A, Solution Structure Of Crkl
Length = 303
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 5 AKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLID-PEGVVRTKDRMFESVSH 63
A+T ++ G FLVR+S PG YVL+ + H ++ P + D+ F+ +
Sbjct: 24 AQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPA 83
Query: 64 LVNYH 68
L+ ++
Sbjct: 84 LLEFY 88
>pdb|3CXL|A Chain A, Crystal Structure Of Human Chimerin 1 (Chn1)
Length = 463
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 1 MSRIAKTAFPSRQDGDFLVRESQGSPGQYVLTGYQGG-TKKHLLLIDPEGVVRTKDRMFE 59
+SR A +G +L+RESQ PG Y L G T+ L D + V ++ FE
Sbjct: 58 ISREAADQLLIVAEGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFV--GEKRFE 115
Query: 60 SVSHLV 65
S+ LV
Sbjct: 116 SIHDLV 121
>pdb|1O41|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78300.
pdb|1O42|A Chain A, Crystal Structure Of Sh2 In Complex With Ru81843.
pdb|1O43|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82129.
pdb|1O44|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85052
pdb|1O45|A Chain A, Crystal Structure Of Sh2 In Complex With Ru84687.
pdb|1O46|A Chain A, Crystal Structure Of Sh2 In Complex With Ru90395.
pdb|1O47|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82209.
pdb|1O48|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85053.
pdb|1O49|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85493.
pdb|1O4A|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82197.
pdb|1O4B|A Chain A, Crystal Structure Of Sh2 In Complex With Ru83876.
pdb|1O4D|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78262.
pdb|1O4E|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78299.
pdb|1O4H|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79072.
pdb|1O4I|A Chain A, Crystal Structure Of Sh2 In Complex With Pas219.
pdb|1O4J|A Chain A, Crystal Structure Of Sh2 In Complex With Iso24.
pdb|1O4K|A Chain A, Crystal Structure Of Sh2 In Complex With Pasbn.
pdb|1O4L|A Chain A, Crystal Structure Of Sh2 In Complex With Fragment2.
pdb|1O4M|A Chain A, Crystal Structure Of Sh2 In Complex With Malonicacid.
pdb|1O4N|A Chain A, Crystal Structure Of Sh2 In Complex With Oxalic Acid.
pdb|1O4O|A Chain A, Crystal Structure Of Sh2 In Complex With
Phenylphosphate.
pdb|1O4P|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78791.
pdb|1O4Q|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79256.
pdb|1O4R|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78783
Length = 108
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ + G Y L+ +G KH + +D G T F S+ LV Y
Sbjct: 29 GTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 88
Query: 68 H 68
+
Sbjct: 89 Y 89
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTK 39
G FLVRESQ PG +VL+ G K
Sbjct: 133 GSFLVRESQSHPGDFVLSVRTGDDK 157
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLL 44
DG FL R S+ +PG L+ + G H+ +
Sbjct: 26 DGSFLARPSKSNPGDLTLSVRRNGAVTHIKI 56
>pdb|1JWO|A Chain A, Crystal Structure Analysis Of The Sh2 Domain Of The Csk
Homologous Kinase Chk
Length = 97
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMF 58
+DG FLVRES PG YVL G H ++ +G + + +F
Sbjct: 24 EDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVF 69
>pdb|1SHD|A Chain A, Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein
Interactions
pdb|1HCT|B Chain B, Nmr Structure Of The Human Src Sh2 Domain Complex
pdb|1HCS|B Chain B, Nmr Structure Of The Human Src Sh2 Domain Complex
pdb|1A07|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Malonyl
Tyr-Glu-(N,N- Dipentyl Amine)
pdb|1A07|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Malonyl
Tyr-Glu-(N,N- Dipentyl Amine)
pdb|1A08|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Difluoro
Phosphotyr- Glu-(N,N-Dipentyl Amine)
pdb|1A08|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Difluoro
Phosphotyr- Glu-(N,N-Dipentyl Amine)
pdb|1A09|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Formyl
Phosphotyr-Glu- (N,N-Dipentyl Amine)
pdb|1A09|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Formyl
Phosphotyr-Glu- (N,N-Dipentyl Amine)
pdb|1A1B|A Chain A, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N,N- Dipentyl Amine)
pdb|1A1B|B Chain B, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N,N- Dipentyl Amine)
pdb|1A1C|A Chain A, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N-Me(- (Ch2)3-Cyclopentyl))
pdb|1A1C|B Chain B, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N-Me(- (Ch2)3-Cyclopentyl))
pdb|1A1E|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(3-
Butylpiperidine)
pdb|1A1E|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(3-
Butylpiperidine)
Length = 107
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ + G Y L+ +G KH + +D G T F S+ LV Y
Sbjct: 31 GTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 90
Query: 68 H 68
+
Sbjct: 91 Y 91
>pdb|1O4C|A Chain A, Crystal Structure Of Sh2 In Complex With Phosphate.
pdb|1O4F|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79073.
pdb|1O4G|A Chain A, Crystal Structure Of Sh2 In Complex With Dpi59
Length = 108
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ + G Y L+ +G KH + +D G T F S+ LV Y
Sbjct: 29 GTFLVRESETTKGAYXLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 88
Query: 68 HCQN 71
+ ++
Sbjct: 89 YSKH 92
>pdb|1KC2|A Chain A, Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c8ala,
Aspcd2ala) Mutant Of The Src Sh2 Domain Bound To The
Pqpyeeipi Peptide
Length = 103
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL-------IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ K L + +D G T F S+
Sbjct: 21 PENPRGTFLVRESETTKGAYCLSVSAFANAKGLNVAHYKIRKLDSGGFYITSRTQFSSLQ 80
Query: 63 HLVNYH 68
LV Y+
Sbjct: 81 QLVAYY 86
>pdb|1R1P|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|B Chain B, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|C Chain C, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|D Chain D, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (lat) By The Adaptor Protein Gads
pdb|1R1Q|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1Q|B Chain B, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|A Chain A, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|C Chain C, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|E Chain E, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|G Chain G, Structural Basis For Differential Recognition Of Tyrosine
Phosphorylated Sites In The Linker For Activation Of T
Cells (Lat) By The Adaptor Protein Gads
Length = 100
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQNQL 73
G F++R SQ SPG + ++ +H ++ D +G F S++ LV+Y+
Sbjct: 31 GFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTS- 89
Query: 74 PIISAESALILRN 86
IS + + LR+
Sbjct: 90 --ISKQKQVFLRD 100
>pdb|3US4|A Chain A, Crystal Structure Of A Sh2 Domain Of A
Megakaryocyte-Associated Tyrosine Kinase (Matk) From
Homo Sapiens At 1.50 A Resolution
Length = 98
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMF 58
+DG FLVRES PG YVL G H ++ +G + + +F
Sbjct: 25 EDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVF 70
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ + G Y L+ +G KH + +D G T F S+ LV Y
Sbjct: 89 GTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 148
Query: 68 HCQN 71
+ ++
Sbjct: 149 YSKH 152
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ + G Y L+ +G KH + +D G T F S+ LV Y
Sbjct: 89 GTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 148
Query: 68 HCQN 71
+ ++
Sbjct: 149 YSKH 152
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ + G Y L+ +G KH + +D G T F S+ LV Y
Sbjct: 89 GTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 148
Query: 68 HCQN 71
+ ++
Sbjct: 149 YSKH 152
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ + G Y L+ +G KH + +D G T F S+ LV Y
Sbjct: 172 GTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 231
Query: 68 HCQN 71
+ ++
Sbjct: 232 YSKH 235
>pdb|1A1A|A Chain A, C-Src (Sh2 Domain With C188a Mutation) Complexed With
Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine)
pdb|1A1A|B Chain B, C-Src (Sh2 Domain With C188a Mutation) Complexed With
Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine)
Length = 107
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FLVRES+ + G Y L+ +G KH + +D G T F S+ LV Y
Sbjct: 31 GTFLVRESETTKGAYSLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 90
Query: 68 HCQN 71
+ ++
Sbjct: 91 YSKH 94
>pdb|1F1W|A Chain A, Src Sh2 Thref1trp Mutant Complexed With The
Phosphopeptide S(Ptr)vnvqn
pdb|1F2F|A Chain A, Src Sh2 Thref1trp Mutant
Length = 104
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G FLVRES+ + G Y L+ +G KH + +D G F S+
Sbjct: 22 PENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYIWSRTQFSSLQ 81
Query: 63 HLVNYHCQN 71
LV Y+ ++
Sbjct: 82 QLVAYYSKH 90
>pdb|1JU5|A Chain A, Ternary Complex Of An Crk Sh2 Domain, Crk-Derived
Phophopeptide, And Abl Sh3 Domain By Nmr Spectroscopy
Length = 109
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLL 44
G FLVR+S SPG YVL+ + H ++
Sbjct: 22 GVFLVRDSSTSPGDYVLSVSENSRVSHYII 51
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 29.3 bits (64), Expect = 0.64, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKH--LLLIDPEGVVRTKDRMFESVS 62
P G F++R+S+ + G Y L+ QG T KH + +D G + F ++
Sbjct: 89 PGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQ 148
Query: 63 HLVNYH 68
LV+++
Sbjct: 149 ELVDHY 154
>pdb|2EOB|A Chain A, Solution Structure Of The Second Sh2 Domain From Rat Plc
Gamma-2
Length = 124
Score = 28.9 bits (63), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLL-IDPEGVVRTKDRMFESVSHLVNYHCQN 71
+DG FL+R+ +G+ Y +T G KH + D V FES+ LV+Y+ ++
Sbjct: 40 RDGAFLIRKREGT-DSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELVSYYEKH 98
Query: 72 QLPIISAESALILRNPVAKCATGAHTGQS 100
L + LR PV ++G S
Sbjct: 99 AL-----YRKMRLRYPVTPELLERYSGPS 122
>pdb|2EO6|A Chain A, Solution Structure Of The Sh2 Domain From Mouse B-Cell
Linker Protein Blnk
Length = 141
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 19/84 (22%)
Query: 11 SRQDGDFLVRESQG--SPGQYVLTGYQG------------GTKKHLLLIDPEGVVRTKDR 56
S +DG FL+R+S G S Y L + TK++ L G + +
Sbjct: 42 SNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYAL-----GKKKNGEE 96
Query: 57 MFESVSHLVNYHCQNQLPIISAES 80
F SV +VN H N L +I +++
Sbjct: 97 YFGSVVEIVNSHQHNPLVLIDSQN 120
>pdb|3EAZ|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl-
Terminal Src Kinase), C122s Mutant
Length = 106
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHL-LLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
+ G FLVRES PG Y L G +H ++ + ++ FE++ LV ++ +
Sbjct: 28 ETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSD 87
>pdb|2EYY|A Chain A, Ct10-Regulated Kinase Isoform I
Length = 204
Score = 28.9 bits (63), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLL 44
G FLVR+S SPG YVL+ + H ++
Sbjct: 33 GVFLVRDSSTSPGDYVLSVSENSRVSHYII 62
>pdb|2DVJ|A Chain A, Phosphorylated Crk-Ii
Length = 230
Score = 28.5 bits (62), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLL 44
G FLVR+S SPG YVL+ + H ++
Sbjct: 35 GVFLVRDSSTSPGDYVLSVSENSRVSHYII 64
>pdb|2EYV|A Chain A, Sh2 Domain Of Ct10-Regulated Kinase
Length = 124
Score = 28.5 bits (62), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLL 44
G FLVR+S SPG YVL+ + H ++
Sbjct: 32 GVFLVRDSSTSPGDYVLSVSENSRVSHYII 61
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 13 QDGDFLVRESQGSPGQYVL-TGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYH 68
+ G FLVRES PG Y L +G + + ++ + ++ FE++ LV ++
Sbjct: 100 ETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHY 156
>pdb|2EYZ|A Chain A, Ct10-Regulated Kinase Isoform Ii
Length = 304
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 15 GDFLVRESQGSPGQYVLTGYQGGTKKHLLL 44
G FLVR+S SPG YVL+ + H ++
Sbjct: 33 GVFLVRDSSTSPGDYVLSVSENSRVSHYII 62
>pdb|3EAC|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl-
Terminal Src Kinase), Oxidized Form
Length = 106
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 13 QDGDFLVRESQGSPGQYVL-TGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQN 71
+ G FLVRES PG Y L G + + ++ + ++ FE++ LV ++ +
Sbjct: 28 ETGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSD 87
>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2
pdb|1G83|B Chain B, Crystal Structure Of Fyn Sh3-Sh2
Length = 165
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FL+RES+ + G Y L+ +G KH + +D G T FE++ LV +
Sbjct: 90 GTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQH 149
Query: 68 HCQ 70
+ +
Sbjct: 150 YSE 152
>pdb|1AOT|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A
Phosphotyrosyl Peptide, Minimized Average Structure
pdb|1AOU|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A
Phosphotyrosyl Peptide, 22 Structures
Length = 106
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FL+RES+ + G Y L+ +G KH + +D G T FE++ LV +
Sbjct: 29 GTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQH 88
Query: 68 HCQ 70
+ +
Sbjct: 89 YSE 91
>pdb|3UF4|A Chain A, Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn Protein
(Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus
Musculus At 1.98 A Resolution
Length = 164
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 15 GDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSHLVNY 67
G FL+RES+ + G Y L+ +G KH + +D G T FE++ LV +
Sbjct: 91 GTFLIRESETTKGAYSLSIRDWDDXKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQH 150
Query: 68 HCQ 70
+ +
Sbjct: 151 YSE 153
>pdb|3M7F|A Chain A, Crystal Structure Of The Nedd4 C2GRB10 SH2 COMPLEX
Length = 108
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 14 DGDFLVRESQGSPGQYVLT 32
DG FL+R+SQ +P +VLT
Sbjct: 28 DGLFLLRDSQSNPKAFVLT 46
>pdb|1NRV|A Chain A, Crystal Structure Of The Sh2 Domain Of Grb10
pdb|1NRV|B Chain B, Crystal Structure Of The Sh2 Domain Of Grb10
Length = 105
Score = 27.3 bits (59), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 14 DGDFLVRESQGSPGQYVLT 32
DG FL+R+SQ +P +VLT
Sbjct: 28 DGLFLLRDSQSNPKAFVLT 46
>pdb|3TL0|A Chain A, Structure Of Shp2 N-Sh2 Domain In Complex With Rlnpyaqlwhr
Peptide
pdb|3TKZ|A Chain A, Structure Of The Shp-2 N-Sh2 Domain In A 1:2 Complex With
Rvipyfvplnr Peptide
Length = 109
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTK-DRMFESVSHLVNYHCQNQ 72
DG FL R S+ +PG + L+ + G H+ + + F +++ LV Y+ ++
Sbjct: 29 DGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHH 88
Query: 73 LPIISAESALI-LRNPVAKCA 92
+ +I L+ P+ CA
Sbjct: 89 GQLKEKNGDVIELKYPL-NCA 108
>pdb|2LRN|A Chain A, Solution Structure Of A Thiol:disulfide Interchange
Protein From Bacteroides Sp.
pdb|4GRF|A Chain A, Crystal Structure Of Thioredoxin Domain Of Thiol-Disulfide
Oxidoreductase Bvu-2223 (Target Efi-501010) From
Bacteroides Vulgatus
Length = 152
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 41 HLLLIDPEGVVRTK----DRMFESVSHLVN 66
H++L+DPEG + K D ++ +V VN
Sbjct: 112 HIILVDPEGKIVAKELRGDDLYNTVEKFVN 141
>pdb|1T5E|A Chain A, The Structure Of Mexa
pdb|1T5E|B Chain B, The Structure Of Mexa
pdb|1T5E|C Chain C, The Structure Of Mexa
pdb|1T5E|D Chain D, The Structure Of Mexa
pdb|1T5E|E Chain E, The Structure Of Mexa
pdb|1T5E|F Chain F, The Structure Of Mexa
pdb|1T5E|G Chain G, The Structure Of Mexa
pdb|1T5E|H Chain H, The Structure Of Mexa
pdb|1T5E|I Chain I, The Structure Of Mexa
pdb|1T5E|J Chain J, The Structure Of Mexa
pdb|1T5E|K Chain K, The Structure Of Mexa
pdb|1T5E|L Chain L, The Structure Of Mexa
pdb|1T5E|M Chain M, The Structure Of Mexa
Length = 360
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 26 PGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESAL 82
PG +V Q G K+ +L +GV T+D ++ + +VN + +L +I A+ +
Sbjct: 251 PGMFVHAQLQEGVKQKAILAPQQGV--TRDLKGQATALVVNAQNKVELRVIKADRVI 305
>pdb|2V4D|A Chain A, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|B Chain B, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|C Chain C, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|D Chain D, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|E Chain E, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|F Chain F, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|G Chain G, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|H Chain H, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|I Chain I, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|J Chain J, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|K Chain K, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|L Chain L, Re-Refinement Of Mexa Adaptor Protein
pdb|2V4D|M Chain M, Re-Refinement Of Mexa Adaptor Protein
Length = 360
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 26 PGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESAL 82
PG +V Q G K+ +L +GV T+D ++ + +VN + +L +I A+ +
Sbjct: 251 PGMFVHAQLQEGVKQKAILAPQQGV--TRDLKGQATALVVNAQNKVELRVIKADRVI 305
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT-----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G F++R+S+ + G Y L+ QG T KH + +D G + F ++
Sbjct: 83 PGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQ 142
Query: 63 HLVNYH 68
LV+++
Sbjct: 143 ELVDHY 148
>pdb|1VF7|A Chain A, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|B Chain B, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|C Chain C, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|D Chain D, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|E Chain E, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|F Chain F, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|G Chain G, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|H Chain H, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|I Chain I, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|J Chain J, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|K Chain K, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|L Chain L, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
pdb|1VF7|M Chain M, Crystal Structure Of The Membrane Fusion Protein, Mexa Of
The Multidrug Transporter
Length = 369
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 26 PGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQLPIISAESAL 82
PG +V Q G K+ +L +GV T+D ++ + +VN + +L +I A+ +
Sbjct: 254 PGMFVHAQLQEGVKQKAILAPQQGV--TRDLKGQATALVVNAQNKVELRVIKADRVI 308
>pdb|2FCI|A Chain A, Structural Basis For The Requirement Of Two
Phosphotyrosines In Signaling Mediated By Syk Tyrosine
Kinase
pdb|2PLD|A Chain A, Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of
Phospholipase C-gamma1 Complexed With A High Affinity
Binding Peptide
pdb|2PLE|A Chain A, Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of
Phospholipase C-Gamma1 Complexed With A High Affinity
Binding Peptide
Length = 105
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 13 QDGDFLVRESQGSPGQYVLTGYQGGTKKHLLLIDPEGVVRTKDRMFESVSHLVNYHCQNQ 72
+DG FLVR+ + P Y ++ G KH + V + F+S+ L++Y+ ++
Sbjct: 30 RDGAFLVRK-RNEPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSEFDSLVDLISYYEKHP 88
Query: 73 L 73
L
Sbjct: 89 L 89
>pdb|1XA6|A Chain A, Crystal Structure Of The Human Beta2-Chimaerin
Length = 466
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGG-TKKHLLLIDPEGVVRTKDRMFESVSHLV 65
+G +++RESQ PG Y L G T + L D + V ++ FES+ LV
Sbjct: 75 EGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFV--GEKRFESIHDLV 125
>pdb|1AYA|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYA|B Chain B, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYB|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYC|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYD|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
Length = 101
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 14 DGDFLVRESQGSPGQYVLTGYQGGTKKHL 42
DG FL R S+ +PG + L+ + G H+
Sbjct: 24 DGSFLARPSKSNPGDFTLSVRRNGAVTHI 52
>pdb|3HCK|A Chain A, Nmr Ensemble Of The Uncomplexed Human Hck Sh2 Domain, 20
Structures
Length = 107
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT--GY---QGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G F++R+S+ + G Y L+ Y QG T KH + +D G + F ++
Sbjct: 23 PGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQ 82
Query: 63 HLVNYH 68
LV+++
Sbjct: 83 ELVDHY 88
>pdb|3NHN|A Chain A, Crystal Structure Of The Src-Family Kinase Hck
Sh3-Sh2-Linker Regulatory Region
Length = 193
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT--GY---QGGTKKHLLL--IDPEGVVRTKDRMFESVS 62
P G F++R+S+ + G Y L+ Y QG T KH + +D G + F ++
Sbjct: 90 PGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQ 149
Query: 63 HLVNYH 68
LV+++
Sbjct: 150 ELVDHY 155
>pdb|2QBY|B Chain B, Crystal Structure Of A Heterodimer Of Cdc6ORC1 INITIATORS
Bound To Origin Dna (From S. Solfataricus)
Length = 384
Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 33 GYQGGTKKHLLLIDPEGVVRTKDRMFE 59
G GG KK+ L+ D E V+R + FE
Sbjct: 344 GRAGGVKKYALVEDKEKVLRALNETFE 370
>pdb|1BLJ|A Chain A, Nmr Ensemble Of Blk Sh2 Domain, 20 Structures
pdb|1BLK|A Chain A, Nmr Ensemble Of Blk Sh2 Domain Using Chemical Shift
Refinement, 20 Structures
Length = 114
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 10 PSRQDGDFLVRESQGSPGQYVLT----GYQGGTKKHLLL--IDPEGVVRTKDRMFESVSH 63
P + G FL+RES+ + G + L+ QG KH + +D G + F ++
Sbjct: 31 PMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQA 90
Query: 64 LVNYHCQ 70
LV ++ +
Sbjct: 91 LVQHYSK 97
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,016,029
Number of Sequences: 62578
Number of extensions: 105475
Number of successful extensions: 439
Number of sequences better than 100.0: 117
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 367
Number of HSP's gapped (non-prelim): 121
length of query: 101
length of database: 14,973,337
effective HSP length: 67
effective length of query: 34
effective length of database: 10,780,611
effective search space: 366540774
effective search space used: 366540774
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)