BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8456
(353 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|342183833|emb|CCC93313.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 637
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 193/376 (51%), Gaps = 92/376 (24%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIGI 78
R+ R A+ C +++Y+KD RY E ++THDQ+ LTA VS +L+++ + DVI +
Sbjct: 221 RVNRNYLASQSCYVIKYSKDVRYSKEIISTHDQRTLTATVSVSKLSEIGNAWCEHDVIAV 280
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
D GQFFPD++ F ANAGK V+V+ALDG ++ F DI LIP AE V KL+AVCMSC
Sbjct: 281 DGGQFFPDILQFCSMAANAGKKVIVSALDGDYRNEPFEDIAKLIPAAESVTKLSAVCMSC 340
Query: 139 FR---DAAFTKRIGQEK-----------------------------------------EV 154
DA +T R Q + EV
Sbjct: 341 NLQSCDACYTHRTVQSEQRELIGGADMYIATCRACYNRLNNQGGSLVENPQSPQSGRIEV 400
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAVEL 213
++GPMF+GKTTEL+ R+ RY A Y C +++Y++D RY E +STHD++ L A VS +L
Sbjct: 401 VIGPMFAGKTTELMSRVNRYSLARYSCYVIKYSEDKRYSKENISTHDRRTLPATVSVTKL 460
Query: 214 NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
+++ D DVI +DEGQF
Sbjct: 461 SEVGEKWCDYDVIAVDEGQF---------------------------------------- 480
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
FPD++ F ANAGK V+VAALDG ++ F DI LIP AE V KL+AVCM
Sbjct: 481 ------FPDILEFCSMAANAGKKVIVAALDGDYRNEPFEDIAKLIPAAESVTKLSAVCML 534
Query: 334 CFRDAAFTKRIGQEKE 349
C DA +T R Q ++
Sbjct: 535 CGCDAYYTHRTVQSEQ 550
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 191/377 (50%), Gaps = 93/377 (24%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLT-AVSAVELNKLIPHTKDIDVIGI 78
R+ R A++ C +++Y+KD RY E ++THD++ L AVS +L ++ + DVI +
Sbjct: 28 RVNRNFLASHSCYVIKYSKDMRYSKEVISTHDRRALIIAVSVGKLGEVGDKWHEYDVIAV 87
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D++ F ANAGK V+VAALD ++ F +I LIP AE V KL+AVCMSC
Sbjct: 88 DEGQFFQDILEFCSMAANAGKKVIVAALDNEYRNAPFENIAKLIPAAESVTKLSAVCMSC 147
Query: 139 FR-DAAFTKRIGQEK-----------------------------------------EVIL 156
DA +T R Q + E+++
Sbjct: 148 KSCDAHYTHRTVQSEQRELIGGADMYNATCRACNNRLNSQGGSLAENPKGPQSGRIELVI 207
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAVELNK 215
GPMF+GKTTEL+ R+ R A+ C +++Y+KD RY E +STHDQ+ LTA VS +L++
Sbjct: 208 GPMFAGKTTELMSRVNRNYLASQSCYVIKYSKDVRYSKEIISTHDQRTLTATVSVSKLSE 267
Query: 216 LIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
+ + DVI +D GQF
Sbjct: 268 IGNAWCEHDVIAVDGGQF------------------------------------------ 285
Query: 276 PPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 335
FPD++ F ANAGK V+V+ALDG ++ F DI LIP AE V KL+AVCMSC
Sbjct: 286 ----FPDILQFCSMAANAGKKVIVSALDGDYRNEPFEDIAKLIPAAESVTKLSAVCMSCN 341
Query: 336 R---DAAFTKRIGQEKE 349
DA +T R Q ++
Sbjct: 342 LQSCDACYTHRTVQSEQ 358
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 93/141 (65%), Gaps = 3/141 (2%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIGI 78
R+ RY A Y C +++Y++D RY E ++THD++ L A VS +L+++ D DVI +
Sbjct: 416 RVNRYSLARYSCYVIKYSEDKRYSKENISTHDRRTLPATVSVTKLSEVGEKWCDYDVIAV 475
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F ANAGK V+VAALDG ++ F DI LIP AE V KL+AVCM C
Sbjct: 476 DEGQFFPDILEFCSMAANAGKKVIVAALDGDYRNEPFEDIAKLIPAAESVTKLSAVCMLC 535
Query: 139 FRDAAFTKRIGQ--EKEVILG 157
DA +T R Q ++E+I G
Sbjct: 536 GCDAYYTHRTVQSEQRELIGG 556
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 48/199 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL-TAVSAV 211
E+++GPMF+GKTTEL+ R+ R A++ C +++Y+KD RY E +STHD++ L AVS
Sbjct: 11 ELVIGPMFAGKTTELMSRVNRNFLASHSCYVIKYSKDMRYSKEVISTHDRRALIIAVSVG 70
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L ++ + DVI +DEGQF
Sbjct: 71 KLGEVGDKWHEYDVIAVDEGQF-------------------------------------- 92
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D++ F ANAGK V+VAALD ++ F +I LIP AE V KL+AVC
Sbjct: 93 --------FQDILEFCSMAANAGKKVIVAALDNEYRNAPFENIAKLIPAAESVTKLSAVC 144
Query: 332 MSCFR-DAAFTKRIGQEKE 349
MSC DA +T R Q ++
Sbjct: 145 MSCKSCDAHYTHRTVQSEQ 163
>gi|342183835|emb|CCC93315.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 849
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 190/374 (50%), Gaps = 90/374 (24%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIGI 78
R+ R A Y C ++ Y+KD RY E + T+D++ L A VS +L+++ D DVI +
Sbjct: 413 RVNRNYLARYSCYVIEYSKDMRYSKEIIPTYDRRTLPATVSVNKLSEVGNAWHDYDVIAV 472
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F +ANAGK V+VAALDG ++ F I LIP AE V KL+AVCMSC
Sbjct: 473 DEGQFFPDILEFCSMVANAGKKVIVAALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSC 532
Query: 139 -FRDAAFTKRIGQEK-----------------------------------------EVIL 156
+A +T RI Q + E+++
Sbjct: 533 RLSNAYYTHRIVQSEQRELIGGADMYIAACRACYNRLNSQGGSLAENPQSPQSGRIELVI 592
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAVELNK 215
GPMF+GKTTELI R+ R A Y C ++ Y+KD RY E +ST+D++ L A VS +L++
Sbjct: 593 GPMFAGKTTELISRVNRNYLARYSCYVIEYSKDMRYSKEIISTYDRRTLPATVSVNKLSE 652
Query: 216 LIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
+ D DVI +DEGQF
Sbjct: 653 VGNAWHDYDVIAVDEGQF------------------------------------------ 670
Query: 276 PPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 335
FPD++ F ANAGK V+VAALDG ++ F I LIP AE V KL+AVCMSC
Sbjct: 671 ----FPDILEFCSMAANAGKKVIVAALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSCG 726
Query: 336 RDAAFTKRIGQEKE 349
DA +T R Q ++
Sbjct: 727 CDAHYTHRTVQSEQ 740
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 189/374 (50%), Gaps = 90/374 (24%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIGI 78
R+ R A++ C ++ Y+K+ RY E + THD + L A VS +L+++ D DVI +
Sbjct: 221 RVNRNYLASHSCYVIEYSKNMRYSRENIPTHDGRTLPATVSVNKLSEVGNAWHDYDVIAV 280
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
D GQFFPD++ F ANAGK V+VAALDG ++ F I LIP AE V KL+AVCMSC
Sbjct: 281 DGGQFFPDILEFCSMAANAGKKVIVAALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSC 340
Query: 139 FRDAAFTKRI----------GQEK-------------------------------EVILG 157
DA +T R G EK E+++G
Sbjct: 341 GCDAYYTHRTVQSEQRELIGGAEKYEATCRACYNRLNNQGGSLVENPQIQQSGRIELVIG 400
Query: 158 PMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAVELNKL 216
PMF+GKTTELI R+ R A Y C ++ Y+KD RY E + T+D++ L A VS +L+++
Sbjct: 401 PMFAGKTTELISRVNRNYLARYSCYVIEYSKDMRYSKEIIPTYDRRTLPATVSVNKLSEV 460
Query: 217 IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPP 276
D DVI +DEGQF
Sbjct: 461 GNAWHDYDVIAVDEGQF------------------------------------------- 477
Query: 277 PPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-F 335
FPD++ F +ANAGK V+VAALDG ++ F I LIP AE V KL+AVCMSC
Sbjct: 478 ---FPDILEFCSMVANAGKKVIVAALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSCRL 534
Query: 336 RDAAFTKRIGQEKE 349
+A +T RI Q ++
Sbjct: 535 SNAYYTHRIVQSEQ 548
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 184/374 (49%), Gaps = 90/374 (24%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVA-THDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R+ RY A Y C ++ Y+K +RY + + H +T VS +L+++ D DVI +
Sbjct: 28 RVNRYSLAGYSCYVIEYSKHERYSKKIFSPQHRLSMITTVSVTKLSEVGNAWHDYDVIAV 87
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F ANAGK V+VAALDG ++ F +I LIP AE V KL+AVCMSC
Sbjct: 88 DEGQFFPDILEFCSMAANAGKKVIVAALDGDYRNEPFENIAKLIPAAESVTKLSAVCMSC 147
Query: 139 -FRDAAFTKRIGQEK-----------------------------------------EVIL 156
+A +T R Q + E+++
Sbjct: 148 RVSNAYYTHRTVQSEQRELIGGADKYEATCRACYNRLNNQGGSLVENPQIQQSGRIELVI 207
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAVELNK 215
GPMF+GKTTELI R+ R A++ C ++ Y+K+ RY E + THD + L A VS +L++
Sbjct: 208 GPMFAGKTTELISRVNRNYLASHSCYVIEYSKNMRYSRENIPTHDGRTLPATVSVNKLSE 267
Query: 216 LIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
+ D DVI +D GQF
Sbjct: 268 VGNAWHDYDVIAVDGGQF------------------------------------------ 285
Query: 276 PPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 335
FPD++ F ANAGK V+VAALDG ++ F I LIP AE V KL+AVCMSC
Sbjct: 286 ----FPDILEFCSMAANAGKKVIVAALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSCG 341
Query: 336 RDAAFTKRIGQEKE 349
DA +T R Q ++
Sbjct: 342 CDAYYTHRTVQSEQ 355
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 91/141 (64%), Gaps = 3/141 (2%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIGI 78
R+ R A Y C ++ Y+KD RY E ++T+D++ L A VS +L+++ D DVI +
Sbjct: 606 RVNRNYLARYSCYVIEYSKDMRYSKEIISTYDRRTLPATVSVNKLSEVGNAWHDYDVIAV 665
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F ANAGK V+VAALDG ++ F I LIP AE V KL+AVCMSC
Sbjct: 666 DEGQFFPDILEFCSMAANAGKKVIVAALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSC 725
Query: 139 FRDAAFTKRIGQ--EKEVILG 157
DA +T R Q ++E+I G
Sbjct: 726 GCDAHYTHRTVQSEQRELIGG 746
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 100/199 (50%), Gaps = 48/199 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS-THDQQKLTAVSAV 211
E+++GPMF+GKTTEL+ R+ RY A Y C ++ Y+K +RY + S H +T VS
Sbjct: 11 ELVIGPMFAGKTTELMSRVNRYSLAGYSCYVIEYSKHERYSKKIFSPQHRLSMITTVSVT 70
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L+++ D DVI +DEGQF
Sbjct: 71 KLSEVGNAWHDYDVIAVDEGQF-------------------------------------- 92
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD++ F ANAGK V+VAALDG ++ F +I LIP AE V KL+AVC
Sbjct: 93 --------FPDILEFCSMAANAGKKVIVAALDGDYRNEPFENIAKLIPAAESVTKLSAVC 144
Query: 332 MSC-FRDAAFTKRIGQEKE 349
MSC +A +T R Q ++
Sbjct: 145 MSCRVSNAYYTHRTVQSEQ 163
>gi|324504589|gb|ADY41981.1| Thymidine kinase [Ascaris suum]
Length = 405
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 179/372 (48%), Gaps = 84/372 (22%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ RY+ AN C IV+Y D RY + VATHD Q A+SAV++ ++ + V+ I
Sbjct: 23 RRLNRYKLANRTCRIVKYRNDTRYALDHVATHDLQMQEAISAVKVADVMDELSEAHVVAI 82
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+ +E++AN GKIV+V+ALDG F R F ++L + P +E + KL AVC C
Sbjct: 83 DEGQFFDDIAECSENLANQGKIVIVSALDGDFNRKRFKNVLDMCPFSEDIIKLNAVCTGC 142
Query: 139 FRDAAFTKRIGQEK-------------------------------------EVILGPMFS 161
DA+FTKR+ EVILGPMFS
Sbjct: 143 GEDASFTKRLTSNTALELIGGRDVYTAMCRQCYFDASQGFMRPHSPSRGRIEVILGPMFS 202
Query: 162 GKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTK 221
GKTTE++RR R+ A C +++Y D RYD KV THDQ V A + +
Sbjct: 203 GKTTEMLRRYNRHALAGRECRVIKYRGDTRYDANKVVTHDQLMHDGVIATHIADIFDELL 262
Query: 222 DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFP 281
VI IDEGQF F
Sbjct: 263 AYKVIAIDEGQF----------------------------------------------FQ 276
Query: 282 DVVSFAESMANAGKIVVVAALDGTFQRTGF-NDILSLIPLAECVEKLTAVCMSCFRDAAF 340
D+ E +AN GKIV+VAALDG + R F + +L L PLAE V KL AVC C DA+F
Sbjct: 277 DIAECCERLANMGKIVIVAALDGDYSRKEFASKVLDLCPLAEKVCKLRAVCTECGSDASF 336
Query: 341 TKRIGQEKEVRI 352
++R K I
Sbjct: 337 SRRTTAHKNQEI 348
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 46/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I GPMFSGKTTE++RR+ RY+ AN C IV+Y D RY + V+THD Q A+SAV+
Sbjct: 7 QLIFGPMFSGKTTEMLRRLNRYKLANRTCRIVKYRNDTRYALDHVATHDLQMQEAISAVK 66
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ + V+ IDEGQF
Sbjct: 67 VADVMDELSEAHVVAIDEGQF--------------------------------------- 87
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+ +E++AN GKIV+V+ALDG F R F ++L + P +E + KL AVC
Sbjct: 88 -------FDDIAECSENLANQGKIVIVSALDGDFNRKRFKNVLDMCPFSEDIIKLNAVCT 140
Query: 333 SCFRDAAFTKRI 344
C DA+FTKR+
Sbjct: 141 GCGEDASFTKRL 152
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR R+ A C +++Y D RYD KV THDQ V A + + VI I
Sbjct: 210 RRYNRHALAGRECRVIKYRGDTRYDANKVVTHDQLMHDGVIATHIADIFDELLAYKVIAI 269
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGF-NDILSLIPLAECVEKLTAVCMS 137
DEGQFF D+ E +AN GKIV+VAALDG + R F + +L L PLAE V KL AVC
Sbjct: 270 DEGQFFQDIAECCERLANMGKIVIVAALDGDYSRKEFASKVLDLCPLAEKVCKLRAVCTE 329
Query: 138 CFRDAAFTKRIGQEK--EVILG 157
C DA+F++R K E+I G
Sbjct: 330 CGSDASFSRRTTAHKNQEIIGG 351
>gi|261332022|emb|CBH15015.1| thymidine kinase, putative [Trypanosoma brucei gambiense DAL972]
Length = 455
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 192/386 (49%), Gaps = 99/386 (25%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIG 77
RR++R+++A C I+ Y+++ Y ++++THDQ LTA VS +L+++ +D DVI
Sbjct: 25 RRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANVSIAKLSEVCDEWRDYDVIA 83
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+D GQFFPDVV F AN GK V+V+ALD + T F+++ L+P AE V KL+AVCM
Sbjct: 84 VDNGQFFPDVVGFCARAANEGKTVIVSALDVDCRETPFDEVCRLVPRAESVLKLSAVCMK 143
Query: 138 CF-RDAAFTKRIGQEKE------------------------------------------- 153
C DA T R + E
Sbjct: 144 CHEHDAFLTYRTIESNERELYGGADMYLAVCRWCYKQLTMSHVDAQKTSASTAAVVPNGA 203
Query: 154 -----VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA- 207
+I+GPMF+GKTTEL+RR++R+++A C I++Y D RY +++HDQ+ LTA
Sbjct: 204 HGRIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIIKYTGDTRYSEGAITSHDQRALTAN 263
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
VS L+ + + DVI +DEGQF
Sbjct: 264 VSVSNLHDVGDEWRKYDVIAVDEGQF---------------------------------- 289
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
FPDV +F A++GK+V+V+ALD + + F +I L+ A+ V KL
Sbjct: 290 ------------FPDVAAFCSKAADSGKVVIVSALDADYLQEPFEEICLLVSRADSVVKL 337
Query: 328 TAVCMSCF-RDAAFTKRIGQEKEVRI 352
+AVCM C R A+FT R + E ++
Sbjct: 338 SAVCMECHNRKASFTYRTVKSDERKL 363
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 48/189 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
E+I+GPMF+GKTTEL+RR++R+++A C I+ Y+++ Y +++STHDQ LTA VS
Sbjct: 9 ELIIGPMFAGKTTELMRRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANVSIA 67
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L+++ +D DVI +D GQF
Sbjct: 68 KLSEVCDEWRDYDVIAVDNGQF-------------------------------------- 89
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPDVV F AN GK V+V+ALD + T F+++ L+P AE V KL+AVC
Sbjct: 90 --------FPDVVGFCARAANEGKTVIVSALDVDCRETPFDEVCRLVPRAESVLKLSAVC 141
Query: 332 MSCFRDAAF 340
M C AF
Sbjct: 142 MKCHEHDAF 150
>gi|22324517|gb|AAM95606.1|AF395663_1 thymidine kinase [Trypanosoma brucei]
Length = 455
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 192/386 (49%), Gaps = 99/386 (25%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIG 77
RR++R+++A C I+ Y+++ Y ++++THDQ LTA VS +L+++ +D DVI
Sbjct: 25 RRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANVSIAKLSEVCDEWRDYDVIA 83
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+D GQFFPDVV F AN GK V+V+ALD + T F+++ L+P AE V KL+AVCM
Sbjct: 84 VDNGQFFPDVVGFCARAANEGKTVIVSALDVDCRETPFDEVCRLVPRAESVLKLSAVCMK 143
Query: 138 CF-RDAAFTKRIGQEKE------------------------------------------- 153
C DA T R + E
Sbjct: 144 CHEHDAFLTYRTIESNERELYGGADMYLAVCRWCYKQLTMSHVDAQKTSASTAAVVPNGA 203
Query: 154 -----VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA- 207
+I+GPMF+GKTTEL+RR++R+++A C I++YA D RY +++HDQ+ LTA
Sbjct: 204 HGRIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIIKYAGDTRYSEGAITSHDQRALTAN 263
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
VS L+ + + DVI +DEGQF
Sbjct: 264 VSVSNLHDVGDEWRKYDVIAVDEGQF---------------------------------- 289
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
FP V +F A++GK+V+V+ALD + + F +I L+ A+ V KL
Sbjct: 290 ------------FPGVAAFCSKAADSGKVVIVSALDADYLQEPFEEICLLVSRADSVVKL 337
Query: 328 TAVCMSCF-RDAAFTKRIGQEKEVRI 352
+AVCM C R A+FT R + E ++
Sbjct: 338 SAVCMECHNRKASFTYRTVKSDERKL 363
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 48/189 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
E+I+GPMF+GKTTEL+RR++R+++A C I+ Y+++ Y +++STHDQ LTA VS
Sbjct: 9 ELIIGPMFAGKTTELMRRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANVSIA 67
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L+++ +D DVI +D GQF
Sbjct: 68 KLSEVCDEWRDYDVIAVDNGQF-------------------------------------- 89
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPDVV F AN GK V+V+ALD + T F+++ L+P AE V KL+AVC
Sbjct: 90 --------FPDVVGFCARAANEGKTVIVSALDVDCRETPFDEVCRLVPRAESVLKLSAVC 141
Query: 332 MSCFRDAAF 340
M C AF
Sbjct: 142 MKCHEHDAF 150
>gi|71746582|ref|XP_822346.1| thymidine kinase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70832014|gb|EAN77518.1| thymidine kinase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 455
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 191/386 (49%), Gaps = 99/386 (25%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIG 77
RR++R+++A C I+ Y+++ Y ++++THDQ LTA VS +L+++ +D DVI
Sbjct: 25 RRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANVSIAKLSEVCDEWRDYDVIA 83
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+D GQFFPDVV F AN GK V+V+ALD + T F+++ L+P AE V KL+AVCM
Sbjct: 84 VDNGQFFPDVVGFCARAANEGKTVIVSALDVDCRETPFDEVCRLVPRAESVLKLSAVCME 143
Query: 138 CF-RDAAFTKRIGQEKE------------------------------------------- 153
C DA T R + E
Sbjct: 144 CHEHDAFLTYRTIESNERELYGGADMYLAVCRWCYKQLTMSHVDAQKTSASTAAVVPNGA 203
Query: 154 -----VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA- 207
+I+GPMF+GKTTEL+RR++R+++A C I++Y D RY +++HDQ+ LTA
Sbjct: 204 HGRIELIIGPMFAGKTTELMRRVQRHKHAQRSCYIIKYTGDTRYSEGAITSHDQRALTAN 263
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
VS L+ + + DVI +DEGQF
Sbjct: 264 VSVSNLHDVGDEWRKYDVIAVDEGQF---------------------------------- 289
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
FP V +F A++GK+V+V+ALD + + F +I L+ A+ V KL
Sbjct: 290 ------------FPGVAAFCSKAADSGKVVIVSALDADYLQEPFEEICLLVSRADSVVKL 337
Query: 328 TAVCMSCF-RDAAFTKRIGQEKEVRI 352
+AVCM C R A+FT R + E ++
Sbjct: 338 SAVCMECHNRKASFTYRTVKSDERKL 363
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 48/189 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
E+I+GPMF+GKTTEL+RR++R+++A C I+ Y+++ Y +++STHDQ LTA VS
Sbjct: 9 ELIIGPMFAGKTTELMRRVQRHKHAQRSCYIINYSRNS-YQNQRLSTHDQLSLTANVSIA 67
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L+++ +D DVI +D GQF
Sbjct: 68 KLSEVCDEWRDYDVIAVDNGQF-------------------------------------- 89
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPDVV F AN GK V+V+ALD + T F+++ L+P AE V KL+AVC
Sbjct: 90 --------FPDVVGFCARAANEGKTVIVSALDVDCRETPFDEVCRLVPRAESVLKLSAVC 141
Query: 332 MSCFRDAAF 340
M C AF
Sbjct: 142 MECHEHDAF 150
>gi|324503582|gb|ADY41554.1| Thymidine kinase [Ascaris suum]
Length = 375
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 154/327 (47%), Gaps = 83/327 (25%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ RY+ AN C IV+Y D RY + VATHD Q A+SAV++ ++ + V+ I
Sbjct: 36 RRLNRYKLANRTCRIVKYRNDTRYALDHVATHDLQMQEAISAVKVADVMDELSEAHVVAI 95
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+ +E++AN GKIV+V+ALDG F R F ++L + P +E + KL AVC C
Sbjct: 96 DEGQFFDDIAECSENLANQGKIVIVSALDGDFNRKRFKNVLDMCPFSEDIIKLNAVCTGC 155
Query: 139 FRDAAFTKRIGQEK-------------------------------------EVILGPMFS 161
DA+FTKR+ EVILGPMFS
Sbjct: 156 GEDASFTKRLTSNTALELIGGRDVYTAMCRQCYFDASQGFVRPHSPSRGRIEVILGPMFS 215
Query: 162 GKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTK 221
GKTTE++RR R+ A C +++Y D RYD KV THDQ V A + +
Sbjct: 216 GKTTEMLRRYNRHALAGRECRVIKYRGDTRYDANKVVTHDQLMHDGVIATHIADIFDELL 275
Query: 222 DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFP 281
VI IDEGQF F
Sbjct: 276 AYKVIAIDEGQF----------------------------------------------FQ 289
Query: 282 DVVSFAESMANAGKIVVVAALDGTFQR 308
D+ E +AN GKIV+VAALDG + R
Sbjct: 290 DIAECCERLANMGKIVIVAALDGDYSR 316
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 46/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I GPMFSGKTTE++RR+ RY+ AN C IV+Y D RY + V+THD Q A+SAV+
Sbjct: 20 QLIFGPMFSGKTTEMLRRLNRYKLANRTCRIVKYRNDTRYALDHVATHDLQMQEAISAVK 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ + V+ IDEGQF
Sbjct: 80 VADVMDELSEAHVVAIDEGQF--------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+ +E++AN GKIV+V+ALDG F R F ++L + P +E + KL AVC
Sbjct: 101 -------FDDIAECSENLANQGKIVIVSALDGDFNRKRFKNVLDMCPFSEDIIKLNAVCT 153
Query: 333 SCFRDAAFTKRI 344
C DA+FTKR+
Sbjct: 154 GCGEDASFTKRL 165
>gi|212373999|emb|CAP19646.1| thymidine kinase [Suberites domuncula]
Length = 220
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 122/200 (61%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++ILGPMFSGKTTELIRR+RR+Q ANY C+IV+YAKDDRY + VSTHD+Q +SA E
Sbjct: 20 QLILGPMFSGKTTELIRRMRRFQVANYACLIVKYAKDDRYSNQDVSTHDKQMTAGISATE 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ K VIGIDEGQF
Sbjct: 80 LTEVKKKAKKYGVIGIDEGQF--------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MANAGK V+VAALDGTFQR F IL+L+P+AE V KL AVCM
Sbjct: 101 -------FPDIVDFCEEMANAGKTVIVAALDGTFQRKPFGPILNLVPMAESVVKLKAVCM 153
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C++DAAFTKR+G EK++ +
Sbjct: 154 VCYKDAAFTKRLGAEKQIEV 173
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/136 (62%), Positives = 105/136 (77%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q ANY C+IV+YAKDDRY + V+THD+Q +SA EL ++ K VIGI
Sbjct: 36 RRMRRFQVANYACLIVKYAKDDRYSNQDVSTHDKQMTAGISATELTEVKKKAKKYGVIGI 95
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MANAGK V+VAALDGTFQR F IL+L+P+AE V KL AVCM C
Sbjct: 96 DEGQFFPDIVDFCEEMANAGKTVIVAALDGTFQRKPFGPILNLVPMAESVVKLKAVCMVC 155
Query: 139 FRDAAFTKRIGQEKEV 154
++DAAFTKR+G EK++
Sbjct: 156 YKDAAFTKRLGAEKQI 171
>gi|340368544|ref|XP_003382811.1| PREDICTED: thymidine kinase, cytosolic-like [Amphimedon
queenslandica]
Length = 226
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 127/216 (58%), Gaps = 50/216 (23%)
Query: 137 SCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK 196
SC A +I +VILGPMFSGKTTEL+RR+RRYQ AN C+I++Y+KDDRYD
Sbjct: 9 SCISGALSKGQI----QVILGPMFSGKTTELMRRMRRYQVANQSCLIIKYSKDDRYDKNG 64
Query: 197 VSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAP 256
V+THD+Q +A++A +L +L D VIGIDEGQF
Sbjct: 65 VATHDKQVSSAMAATKLYELKKTVGDYGVIGIDEGQF----------------------- 101
Query: 257 IKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILS 316
FPD+V F E MANAGK V+VAALDGTFQR F +L+
Sbjct: 102 -----------------------FPDLVEFCEDMANAGKTVIVAALDGTFQRKAFGSVLN 138
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
LIP+AE V KL AVCM CF DAAFTKR+G EKE+ +
Sbjct: 139 LIPMAESVVKLKAVCMMCFNDAAFTKRLGSEKEIEV 174
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 105/136 (77%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ AN C+I++Y+KDDRYD VATHD+Q +A++A +L +L D VIGI
Sbjct: 37 RRMRRYQVANQSCLIIKYSKDDRYDKNGVATHDKQVSSAMAATKLYELKKTVGDYGVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MANAGK V+VAALDGTFQR F +L+LIP+AE V KL AVCM C
Sbjct: 97 DEGQFFPDLVEFCEDMANAGKTVIVAALDGTFQRKAFGSVLNLIPMAESVVKLKAVCMMC 156
Query: 139 FRDAAFTKRIGQEKEV 154
F DAAFTKR+G EKE+
Sbjct: 157 FNDAAFTKRLGSEKEI 172
>gi|391334485|ref|XP_003741634.1| PREDICTED: thymidine kinase, cytosolic-like [Metaseiulus
occidentalis]
Length = 202
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 122/200 (61%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I+GPMFSGKTTELIRR+RRY +N+RC +++YAKDDRYD E VSTHDQ K+TA +
Sbjct: 24 QLIVGPMFSGKTTELIRRMRRYDVSNHRCYLIKYAKDDRYDAENVSTHDQAKMTASVCLR 83
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + DVIG+DEGQF
Sbjct: 84 LADVEAAALNFDVIGVDEGQF--------------------------------------- 104
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPDVV FAE MA GK+V+VAALDGT+QR GF +I+ L+PL+E + KL AVCM
Sbjct: 105 -------FPDVVCFAEKMAGLGKVVIVAALDGTYQREGFPNIMKLLPLSESIIKLMAVCM 157
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C+R+AAFTKRIG E EV I
Sbjct: 158 VCYREAAFTKRIGSETEVEI 177
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRY +N+RC +++YAKDDRYD E V+THDQ K+TA + L + + DVIG+
Sbjct: 40 RRMRRYDVSNHRCYLIKYAKDDRYDAENVSTHDQAKMTASVCLRLADVEAAALNFDVIGV 99
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPDVV FAE MA GK+V+VAALDGT+QR GF +I+ L+PL+E + KL AVCM C
Sbjct: 100 DEGQFFPDVVCFAEKMAGLGKVVIVAALDGTYQREGFPNIMKLLPLSESIIKLMAVCMVC 159
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
+R+AAFTKRIG E EV I+G
Sbjct: 160 YREAAFTKRIGSETEVEIIG 179
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSP 261
VE+IGG+DKYMAVCR+CY P K +P
Sbjct: 175 VEIIGGTDKYMAVCRKCYNSSDP-KSAP 201
>gi|62637452|ref|YP_227450.1| Thymidine kinase [Deerpox virus W-848-83]
gi|115503312|gb|ABI99230.1| thymidine kinase [Deerpox virus W-848-83]
Length = 191
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 127/201 (63%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAV 211
++ILGPMFSGK+TELIR +RRYQ A Y+C I++Y+KDDRY + E + THD+ + A+S+
Sbjct: 17 QLILGPMFSGKSTELIRLLRRYQLAKYKCNIIKYSKDDRYGNDEFLYTHDKLSIPAISSK 76
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
LN+ H D+DVIGIDEGQF
Sbjct: 77 TLNEAYSHIIDVDVIGIDEGQF-------------------------------------- 98
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+V+F+ESMAN GKIV++AALDGT++R+ FNDIL LIPL+E V KL AVC
Sbjct: 99 --------FPDIVNFSESMANIGKIVIIAALDGTYKRSPFNDILQLIPLSEKVIKLNAVC 150
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
M+C+ DA+F+KRI EKE+ I
Sbjct: 151 MNCYGDASFSKRISDEKEIEI 171
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 113/141 (80%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R +RRYQ A Y+C I++Y+KDDRY + E + THD+ + A+S+ LN+ H D+DVIG
Sbjct: 33 RLLRRYQLAKYKCNIIKYSKDDRYGNDEFLYTHDKLSIPAISSKTLNEAYSHIIDVDVIG 92
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFFPD+V+F+ESMAN GKIV++AALDGT++R+ FNDIL LIPL+E V KL AVCM+
Sbjct: 93 IDEGQFFPDIVNFSESMANIGKIVIIAALDGTYKRSPFNDILQLIPLSEKVIKLNAVCMN 152
Query: 138 CFRDAAFTKRIGQEKEV-ILG 157
C+ DA+F+KRI EKE+ I+G
Sbjct: 153 CYGDASFSKRISDEKEIEIIG 173
>gi|58332754|ref|NP_001011452.1| thymidine kinase 1 [Xenopus (Silurana) tropicalis]
gi|56971912|gb|AAH88552.1| thymidine kinase 1, soluble [Xenopus (Silurana) tropicalis]
gi|89273919|emb|CAJ81483.1| thymidine kinase 1, soluble [Xenopus (Silurana) tropicalis]
Length = 236
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y+CM+++YAKD RY E ++THDQ + AVSA +
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQIAQYKCMLIKYAKDTRYSKEHLATHDQNTMAAVSACQ 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 82 LRDVSAEALACSVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL +VCM
Sbjct: 103 -------FPDIVDFCEEMANRGKTMIVAALDGTFQRKAFGNILNLVPLAESVVKLNSVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C+R+AA+TKR+G EKEV +
Sbjct: 156 ECYREAAYTKRLGAEKEVEV 175
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 122/198 (61%), Gaps = 15/198 (7%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+CM+++YAKD RY E +ATHDQ + AVSA +L + VIGI
Sbjct: 38 RRVRRFQIAQYKCMLIKYAKDTRYSKEHLATHDQNTMAAVSACQLRDVSAEALACSVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL +VCM C
Sbjct: 98 DEGQFFPDIVDFCEEMANRGKTMIVAALDGTFQRKAFGNILNLVPLAESVVKLNSVCMEC 157
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS 198
+R+AA+TKR+G EKEV E+I +Y C + K+ + EK +
Sbjct: 158 YREAAYTKRLGAEKEV-----------EVIGGAEKYHSVCRLC----FFKNQQLPVEKEN 202
Query: 199 THDQQKLTAVSAVELNKL 216
L +S NKL
Sbjct: 203 VLSHNALDTISLKLSNKL 220
>gi|321461976|gb|EFX73003.1| hypothetical protein DAPPUDRAFT_200671 [Daphnia pulex]
Length = 254
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 125/203 (61%), Gaps = 49/203 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDT---EKVSTHDQQKLTAVS 209
++I GPMFSGKTTELIRR++RY+ AN++C+IV+YAKD RY++ + V+THDQQ AV+
Sbjct: 18 QIIFGPMFSGKTTELIRRLKRYEVANHKCLIVKYAKDLRYESKCGQGVATHDQQTRAAVA 77
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A L+ + VIGIDEGQF
Sbjct: 78 ATVLSSIAHLADSCSVIGIDEGQF------------------------------------ 101
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
FPDVV F E+MANAGKIVVVAALDGT+QR+GF + L+L+PLAE V KLTA
Sbjct: 102 ----------FPDVVEFCEAMANAGKIVVVAALDGTYQRSGFGNFLNLVPLAENVVKLTA 151
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
VCM C+ +AAFT+R+G E EV +
Sbjct: 152 VCMRCYGEAAFTQRLGSETEVEL 174
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 110/141 (78%), Gaps = 3/141 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDT---EKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR++RY+ AN++C+IV+YAKD RY++ + VATHDQQ AV+A L+ + V
Sbjct: 34 RRLKRYEVANHKCLIVKYAKDLRYESKCGQGVATHDQQTRAAVAATVLSSIAHLADSCSV 93
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IGIDEGQFFPDVV F E+MANAGKIVVVAALDGT+QR+GF + L+L+PLAE V KLTAVC
Sbjct: 94 IGIDEGQFFPDVVEFCEAMANAGKIVVVAALDGTYQRSGFGNFLNLVPLAENVVKLTAVC 153
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
M C+ +AAFT+R+G E EV L
Sbjct: 154 MRCYGEAAFTQRLGSETEVEL 174
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
VE+IGGS+KYMAVCRECY++ S +TLA++ N P
Sbjct: 172 VELIGGSEKYMAVCRECYRK---FSESNVETLADDCCHGNRMSSP 213
>gi|344291108|ref|XP_003417278.1| PREDICTED: thymidine kinase, cytosolic-like [Loxodonta africana]
Length = 234
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 123/200 (61%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + +STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYGS-GLSTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ + VIGIDEGQF
Sbjct: 81 LRDVVQEALAVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFSETMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGAEKEVEV 174
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + ++THD+ + A+ A L ++ + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYGS-GLSTHDRNTMEALPACLLRDVVQEALAVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFSETMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGAEKEV 172
>gi|225713226|gb|ACO12459.1| Thymidine kinase [Lepeophtheirus salmonis]
gi|290462321|gb|ADD24208.1| Thymidine kinase [Lepeophtheirus salmonis]
Length = 195
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 126/207 (60%), Gaps = 46/207 (22%)
Query: 146 KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
K + + ++I+GPMFSGK+TELIRR++RYQ A Y+C+ ++YAKD RYD+ +STHD+ L
Sbjct: 18 KMLPAQIQLIIGPMFSGKSTELIRRLKRYQIAKYKCLNIKYAKDTRYDSNAISTHDRIVL 77
Query: 206 TAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
AVS++ L+ L D DVIGIDEGQF
Sbjct: 78 DAVSSLSLDTLKERAMDFDVIGIDEGQF-------------------------------- 105
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FPD+VSF E+MAN+GKIVV+AALDGTFQR GF +I+ L+PL+E V
Sbjct: 106 --------------FPDIVSFCETMANSGKIVVIAALDGTFQRKGFPNIMELVPLSESVT 151
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KL +VCM C+ + ++TKR EKE+ +
Sbjct: 152 KLNSVCMICYGEGSYTKRTTNEKEIEV 178
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 106/136 (77%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++RYQ A Y+C+ ++YAKD RYD+ ++THD+ L AVS++ L+ L D DVIGI
Sbjct: 41 RRLKRYQIAKYKCLNIKYAKDTRYDSNAISTHDRIVLDAVSSLSLDTLKERAMDFDVIGI 100
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+VSF E+MAN+GKIVV+AALDGTFQR GF +I+ L+PL+E V KL +VCM C
Sbjct: 101 DEGQFFPDIVSFCETMANSGKIVVIAALDGTFQRKGFPNIMELVPLSESVTKLNSVCMIC 160
Query: 139 FRDAAFTKRIGQEKEV 154
+ + ++TKR EKE+
Sbjct: 161 YGEGSYTKRTTNEKEI 176
>gi|410981864|ref|XP_003997286.1| PREDICTED: thymidine kinase, cytosolic [Felis catus]
Length = 237
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FSTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFSETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGAEKEVEV 174
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FSTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFSETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGAEKEV 172
>gi|395533305|ref|XP_003768701.1| PREDICTED: thymidine kinase, cytosolic [Sarcophilus harrisii]
Length = 234
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 122/200 (61%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYG-KSFSTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQDALAVTVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+ESMANAGK V+VAALDGTFQR F +IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFSESMANAGKTVIVAALDGTFQRKAFGNILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGVEKEVEV 174
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYG-KSFSTHDRNTMEALPACLLRDVAQDALAVTVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+ESMANAGK V+VAALDGTFQR F +IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFSESMANAGKTVIVAALDGTFQRKAFGNILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGVEKEV 172
>gi|126308689|ref|XP_001371195.1| PREDICTED: thymidine kinase, cytosolic [Monodelphis domestica]
Length = 234
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 124/200 (62%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY ++ STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SKNFSTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + + VIGIDEGQF
Sbjct: 81 LRDVAQNALAVTVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E+MANAGK ++VAALDGTFQR F +IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFSETMANAGKTIIVAALDGTFQRKAFGNILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGIEKEVEV 174
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY ++ +THD+ + A+ A L + + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SKNFSTHDRNTMEALPACLLRDVAQNALAVTVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK ++VAALDGTFQR F +IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFSETMANAGKTIIVAALDGTFQRKAFGNILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGIEKEV 172
>gi|359320229|ref|XP_003639284.1| PREDICTED: thymidine kinase, cytosolic-like [Canis lupus
familiaris]
Length = 242
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFSETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGSEKEVEV 174
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFSETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGSEKEV 172
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN-ENAALNVPPPP 278
VEVIGG+DKY +VCR CY +KA + N EN + VP P
Sbjct: 172 VEVIGGADKYHSVCRLCYFKKASGPPMGLDSRENKENVLVLVPGKP 217
>gi|405971403|gb|EKC36242.1| Thymidine kinase, cytosolic [Crassostrea gigas]
Length = 230
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 121/200 (60%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I GPMFSGKTTEL+RR++RYQ ANY+C++V+Y+KDDRYD E ++THD+Q L A+ A
Sbjct: 22 QLIFGPMFSGKTTELMRRMKRYQIANYKCLVVKYSKDDRYDKEGIATHDRQTLAAIPADV 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+++ ++ DVIGIDEGQF
Sbjct: 82 LDQVKSQAENFDVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F DVV F + MA GK V+VAALDGTFQ+ GF DIL+L+PLAE V KLTAVCM
Sbjct: 103 -------FKDVVEFCDEMAERGKTVIVAALDGTFQKKGFGDILNLVPLAESVIKLTAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
SC + +FTKR G E V +
Sbjct: 156 SCNHEGSFTKRKGMETAVEV 175
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 108/141 (76%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++RYQ ANY+C++V+Y+KDDRYD E +ATHD+Q L A+ A L+++ ++ DVIGI
Sbjct: 38 RRMKRYQIANYKCLVVKYSKDDRYDKEGIATHDRQTLAAIPADVLDQVKSQAENFDVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF DVV F + MA GK V+VAALDGTFQ+ GF DIL+L+PLAE V KLTAVCMSC
Sbjct: 98 DEGQFFKDVVEFCDEMAERGKTVIVAALDGTFQKKGFGDILNLVPLAESVIKLTAVCMSC 157
Query: 139 FRDAAFTKRIGQEK--EVILG 157
+ +FTKR G E EVI G
Sbjct: 158 NHEGSFTKRKGMETAVEVIGG 178
>gi|211956346|ref|YP_002302415.1| thymidine kinase [Deerpox virus W-1170-84]
gi|115503141|gb|ABI99059.1| thymidine kinase [Deerpox virus W-1170-84]
Length = 191
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 126/201 (62%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAV 211
++ILGPMFSGK+TELIR +RRYQ A Y+C I++Y+KDDRY + E + THD+ + A+S+
Sbjct: 17 QLILGPMFSGKSTELIRLLRRYQLAKYKCNIIKYSKDDRYGNDEFLYTHDKLSIPAISSK 76
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
LN+ H D+DVIGIDEGQF
Sbjct: 77 TLNEAYSHIIDVDVIGIDEGQF-------------------------------------- 98
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+V+F+ESMAN GKIV++AALDGT++R+ FNDIL LIPL+E V KL AVC
Sbjct: 99 --------FPDIVNFSESMANIGKIVIIAALDGTYKRSPFNDILQLIPLSEKVIKLNAVC 150
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
M+C +A+F+KRI EKE+ I
Sbjct: 151 MNCCGEASFSKRISDEKEIEI 171
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 112/141 (79%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R +RRYQ A Y+C I++Y+KDDRY + E + THD+ + A+S+ LN+ H D+DVIG
Sbjct: 33 RLLRRYQLAKYKCNIIKYSKDDRYGNDEFLYTHDKLSIPAISSKTLNEAYSHIIDVDVIG 92
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFFPD+V+F+ESMAN GKIV++AALDGT++R+ FNDIL LIPL+E V KL AVCM+
Sbjct: 93 IDEGQFFPDIVNFSESMANIGKIVIIAALDGTYKRSPFNDILQLIPLSEKVIKLNAVCMN 152
Query: 138 CFRDAAFTKRIGQEKEV-ILG 157
C +A+F+KRI EKE+ I+G
Sbjct: 153 CCGEASFSKRISDEKEIEIIG 173
>gi|301766016|ref|XP_002918437.1| PREDICTED: LOW QUALITY PROTEIN: thymidine kinase, cytosolic-like,
partial [Ailuropoda melanoleuca]
Length = 249
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 120/198 (60%), Gaps = 47/198 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 37 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FSTHDRNTMEALPACL 95
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 96 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 116
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 117 -------FPDIVEFSETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 169
Query: 333 SCFRDAAFTKRIGQEKEV 350
CFR+AA+TKR+G EKEV
Sbjct: 170 ECFREAAYTKRLGSEKEV 187
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 53 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FSTHDRNTMEALPACLLRDVAQEALGVAVIGI 111
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 112 DEGQFFPDIVEFSETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 171
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 172 FREAAYTKRLGSEKEV 187
>gi|152941146|gb|ABS45010.1| thymidine kinase 1, soluble [Bos taurus]
gi|440892460|gb|ELR45640.1| Thymidine kinase, cytosolic [Bos grunniens mutus]
Length = 266
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 136/234 (58%), Gaps = 54/234 (23%)
Query: 125 AEC-VEKLTAVCMSCFR-----DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYAN 178
AEC V +L MSC + +K GQ +VILGPMFSGK+TEL+RR+RR+Q A
Sbjct: 17 AECLVCQLPEGAMSCINLPNVLPGSPSKTRGQ-IQVILGPMFSGKSTELMRRVRRFQVAQ 75
Query: 179 YRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIG 238
Y+C++++YAKD RY + STHD+ + A+ A L +I + + VIGIDEGQF
Sbjct: 76 YKCLVIKYAKDTRYSS-LFSTHDRNTMEALPACLLRDVIQDAQRVAVIGIDEGQF----- 129
Query: 239 GSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVV 298
FPD+V F E+MAN+GK V+
Sbjct: 130 -----------------------------------------FPDIVEFCENMANSGKTVI 148
Query: 299 VAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV +
Sbjct: 149 VAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGVEKEVEV 202
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L +I + + VIGI
Sbjct: 66 RRVRRFQVAQYKCLVIKYAKDTRYSS-LFSTHDRNTMEALPACLLRDVIQDAQRVAVIGI 124
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 125 DEGQFFPDIVEFCENMANSGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 184
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 185 FREAAYTKRLGVEKEV 200
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + V + VEVIGG+DKY +VCR CY +KA + +
Sbjct: 176 KLTAV-CMECFREAAYTKRLGV-----EKEVEVIGGADKYHSVCRLCYFKKASGQPAVLD 229
Query: 264 TLAN-ENAALNVPPPPEFPDV 283
+ N EN + + P E P V
Sbjct: 230 SEENKENCPMTLGKPAEAPGV 250
>gi|444727784|gb|ELW68262.1| Thymidine kinase, cytosolic [Tupaia chinensis]
Length = 234
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 120/200 (60%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FSTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FSTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|291226621|ref|XP_002733254.1| PREDICTED: thymidine kinase-like [Saccoglossus kowalevskii]
Length = 248
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 126/219 (57%), Gaps = 49/219 (22%)
Query: 136 MSCF--RDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD 193
MSC D + + GQ +VI GPMFSGKTTELIRRI+R+Q AN+ C+IV+YA DDRYD
Sbjct: 2 MSCITTSDVICSSKKGQ-IQVIFGPMFSGKTTELIRRIKRFQIANHSCLIVKYANDDRYD 60
Query: 194 TEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQ 253
++THD++ AVSA EL L DVIGIDEGQF
Sbjct: 61 KNGIATHDREVKAAVSATELCPLRKTAMKYDVIGIDEGQF-------------------- 100
Query: 254 KAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFND 313
FPD V F+E MA+ GK V+VAALDGTFQR GF +
Sbjct: 101 --------------------------FPDCVEFSEEMASKGKKVIVAALDGTFQRKGFGN 134
Query: 314 ILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
IL+L+PLAE V KL AVCM C+ +A++TKR+G E V I
Sbjct: 135 ILNLVPLAESVIKLNAVCMHCYSEASYTKRLGVETAVEI 173
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI+R+Q AN+ C+IV+YA DDRYD +ATHD++ AVSA EL L DVIGI
Sbjct: 36 RRIKRFQIANHSCLIVKYANDDRYDKNGIATHDREVKAAVSATELCPLRKTAMKYDVIGI 95
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F+E MA+ GK V+VAALDGTFQR GF +IL+L+PLAE V KL AVCM C
Sbjct: 96 DEGQFFPDCVEFSEEMASKGKKVIVAALDGTFQRKGFGNILNLVPLAESVIKLNAVCMHC 155
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
+ +A++TKR+G E V I+G
Sbjct: 156 YSEASYTKRLGVETAVEIIG 175
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 17/18 (94%)
Query: 234 VEVIGGSDKYMAVCRECY 251
VE+IGG+DKYMAVCR CY
Sbjct: 171 VEIIGGTDKYMAVCRACY 188
>gi|431908720|gb|ELK12312.1| Thymidine kinase, cytosolic [Pteropus alecto]
Length = 243
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 121/200 (60%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A YRC++++YAKD RY ++ THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRLRRFQIAQYRCLMIKYAKDTRY-SDSFCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVTVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFSEAMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGMEKEVEV 174
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A YRC++++YAKD RY ++ THD+ + A+ A L + + VIGI
Sbjct: 38 RRLRRFQIAQYRCLMIKYAKDTRY-SDSFCTHDRNTMEALPACLLRDVAQEALGVTVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFSEAMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGMEKEV 172
>gi|327264601|ref|XP_003217101.1| PREDICTED: thymidine kinase, cytosolic [Anolis carolinensis]
Length = 233
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 118/200 (59%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY VSTHD+ + AVSA
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQIAQYKCLLIKYAKDTRYCVNGVSTHDRNTMEAVSACC 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 82 LKDVHQEALSSAVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD++ F E+MANAGK V+VAALDGTFQR F +IL L+PLAE V KL AVCM
Sbjct: 103 -------FPDIIEFCEAMANAGKTVIVAALDGTFQRKAFGNILHLVPLAESVVKLNAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+A++TKR+G EKEV +
Sbjct: 156 ECFREASYTKRLGAEKEVEV 175
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY V+THD+ + AVSA L + VIGI
Sbjct: 38 RRVRRFQIAQYKCLLIKYAKDTRYCVNGVSTHDRNTMEAVSACCLKDVHQEALSSAVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F E+MANAGK V+VAALDGTFQR F +IL L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDIIEFCEAMANAGKTVIVAALDGTFQRKAFGNILHLVPLAESVVKLNAVCMEC 157
Query: 139 FRDAAFTKRIGQEKEV 154
FR+A++TKR+G EKEV
Sbjct: 158 FREASYTKRLGAEKEV 173
>gi|148229735|ref|NP_001091041.1| thymidine kinase, cytosolic [Bos taurus]
gi|182705238|sp|A5D7R8.1|KITH_BOVIN RecName: Full=Thymidine kinase, cytosolic
gi|146186560|gb|AAI40659.1| MGC148510 protein [Bos taurus]
gi|296476077|tpg|DAA18192.1| TPA: thymidine kinase 1 [Bos taurus]
Length = 238
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 122/200 (61%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYSS-LFSTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L +I + + VIGIDEGQF
Sbjct: 81 LRDVIQDAQRVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCENMANSGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGVEKEVEV 174
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L +I + + VIGI
Sbjct: 38 RRVRRFQVAQYKCLVIKYAKDTRYSS-LFSTHDRNTMEALPACLLRDVIQDAQRVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCENMANSGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGVEKEV 172
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + V + VEVIGG+DKY +VCR CY +KA + +
Sbjct: 148 KLTAV-CMECFREAAYTKRLGV-----EKEVEVIGGADKYHSVCRLCYFKKASGQPAVLD 201
Query: 264 TLAN-ENAALNVPPPPEFPDV 283
+ N EN + + P E P V
Sbjct: 202 SEENKENCPMTLGKPAEAPGV 222
>gi|156342067|ref|XP_001620868.1| hypothetical protein NEMVEDRAFT_v1g2938 [Nematostella vectensis]
gi|156206273|gb|EDO28768.1| predicted protein [Nematostella vectensis]
Length = 155
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 120/200 (60%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGKTTEL+RRI+RYQ AN++C++++YAKD RYD E V+THD+Q L A
Sbjct: 2 QVIFGPMFSGKTTELLRRIKRYQVANHKCLLIKYAKDIRYDEEGVATHDRQILRATPCTV 61
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L L + VIGIDEGQF
Sbjct: 62 LEDLKNKAINHSVIGIDEGQF--------------------------------------- 82
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E MA+ GK +++AALDGTFQR F +IL L+PLAE V KL+AVCM
Sbjct: 83 -------FPDIVEFSEEMASEGKTIIIAALDGTFQRKAFGNILHLVPLAESVVKLSAVCM 135
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
+CF+DA+FTKR+G +K V I
Sbjct: 136 NCFKDASFTKRLGYDKRVSI 155
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 104/136 (76%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI+RYQ AN++C++++YAKD RYD E VATHD+Q L A L L + VIGI
Sbjct: 18 RRIKRYQVANHKCLLIKYAKDIRYDEEGVATHDRQILRATPCTVLEDLKNKAINHSVIGI 77
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E MA+ GK +++AALDGTFQR F +IL L+PLAE V KL+AVCM+C
Sbjct: 78 DEGQFFPDIVEFSEEMASEGKTIIIAALDGTFQRKAFGNILHLVPLAESVVKLSAVCMNC 137
Query: 139 FRDAAFTKRIGQEKEV 154
F+DA+FTKR+G +K V
Sbjct: 138 FKDASFTKRLGYDKRV 153
>gi|156381164|ref|XP_001632136.1| predicted protein [Nematostella vectensis]
gi|156219187|gb|EDO40073.1| predicted protein [Nematostella vectensis]
Length = 212
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 120/200 (60%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGKTTEL+RRI+RYQ AN++C++++YAKD RYD E V+THD+Q L A
Sbjct: 26 QVIFGPMFSGKTTELLRRIKRYQVANHKCLLIKYAKDIRYDEEGVATHDRQILRATPCTV 85
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L L + VIGIDEGQF
Sbjct: 86 LEDLKNKAINHSVIGIDEGQF--------------------------------------- 106
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E MA+ GK +++AALDGTFQR F +IL L+PLAE V KL+AVCM
Sbjct: 107 -------FPDIVEFSEEMASEGKTIIIAALDGTFQRKAFGNILHLVPLAESVVKLSAVCM 159
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
+CF+DA+FTKR+G +K V +
Sbjct: 160 NCFKDASFTKRLGYDKRVEV 179
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 104/136 (76%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI+RYQ AN++C++++YAKD RYD E VATHD+Q L A L L + VIGI
Sbjct: 42 RRIKRYQVANHKCLLIKYAKDIRYDEEGVATHDRQILRATPCTVLEDLKNKAINHSVIGI 101
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E MA+ GK +++AALDGTFQR F +IL L+PLAE V KL+AVCM+C
Sbjct: 102 DEGQFFPDIVEFSEEMASEGKTIIIAALDGTFQRKAFGNILHLVPLAESVVKLSAVCMNC 161
Query: 139 FRDAAFTKRIGQEKEV 154
F+DA+FTKR+G +K V
Sbjct: 162 FKDASFTKRLGYDKRV 177
>gi|355724315|gb|AES08189.1| thymidine kinase 1, soluble [Mustela putorius furo]
Length = 240
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 120/200 (60%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + + STHD+ + A+ A
Sbjct: 24 QVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYSS-RFSTHDRNTMEALPASL 82
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 83 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 103
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 104 -------FPDXXXFSETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 156
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 157 ECFREAAYTKRLGSEKEVEV 176
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + + +THD+ + A+ A L + + VIGI
Sbjct: 40 RRVRRFQVAQYKCLVIKYAKDTRYSS-RFSTHDRNTMEALPASLLRDVAQEALGVAVIGI 98
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 99 DEGQFFPDXXXFSETMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 158
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 159 FREAAYTKRLGSEKEV 174
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 234 VEVIGGSDKYMAVCRECY-KQKAPIKRSPFKTLANENAALNVPPPP 278
VEVIGG+DKY +VCR CY K+ A + +P EN + VP P
Sbjct: 174 VEVIGGADKYHSVCRLCYFKKPAGLPAAPDGKENKENCPVPVPARP 219
>gi|332849156|ref|XP_003315799.1| PREDICTED: thymidine kinase, cytosolic isoform 3 [Pan troglodytes]
gi|410052228|ref|XP_003953250.1| PREDICTED: thymidine kinase, cytosolic [Pan troglodytes]
gi|410339535|gb|JAA38714.1| thymidine kinase 1, soluble [Pan troglodytes]
Length = 276
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 130/230 (56%), Gaps = 53/230 (23%)
Query: 128 VEKLTAVCMSCFR-----DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCM 182
V +L MSC + +K GQ +VILGPMFSGK+TEL+RR+RR+Q A Y+C+
Sbjct: 35 VRELPGGAMSCINLPTVLPGSPSKTRGQ-IQVILGPMFSGKSTELMRRVRRFQIAQYKCL 93
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDK 242
+++YAKD RY + THD+ + A+ A L + + VIGIDEGQF
Sbjct: 94 VIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQF--------- 143
Query: 243 YMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAAL 302
FPD+V F E+MANAGK V+VAAL
Sbjct: 144 -------------------------------------FPDIVEFCEAMANAGKTVIVAAL 166
Query: 303 DGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
DGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV +
Sbjct: 167 DGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEV 216
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 80 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 138
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 139 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 198
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 199 FREAAYTKRLGTEKEV 214
>gi|397494933|ref|XP_003818321.1| PREDICTED: thymidine kinase, cytosolic [Pan paniscus]
Length = 276
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 130/230 (56%), Gaps = 53/230 (23%)
Query: 128 VEKLTAVCMSCFR-----DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCM 182
V +L MSC + +K GQ +VILGPMFSGK+TEL+RR+RR+Q A Y+C+
Sbjct: 35 VRELPGGAMSCINLPTVLPGSPSKTRGQ-IQVILGPMFSGKSTELMRRVRRFQIAQYKCL 93
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDK 242
+++YAKD RY + THD+ + A+ A L + + VIGIDEGQF
Sbjct: 94 VIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQF--------- 143
Query: 243 YMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAAL 302
FPD+V F E+MANAGK V+VAAL
Sbjct: 144 -------------------------------------FPDIVEFCEAMANAGKTVIVAAL 166
Query: 303 DGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
DGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV +
Sbjct: 167 DGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEV 216
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 80 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 138
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 139 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 198
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 199 FREAAYTKRLGTEKEV 214
>gi|443712089|gb|ELU05548.1| hypothetical protein CAPTEDRAFT_182750 [Capitella teleta]
Length = 233
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 119/201 (59%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDT-EKVSTHDQQKLTAVSAV 211
+VI GPMFSGKTTEL+RR++R+Q ANY C++++YA D RY E ++THD+Q + AV A
Sbjct: 21 QVIFGPMFSGKTTELVRRMKRFQIANYSCLLIKYANDTRYTGDEGLATHDKQVVPAVPAT 80
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L L ++ DVIG+DEGQF
Sbjct: 81 KLKDLWTKAEEADVIGVDEGQF-------------------------------------- 102
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD V F E+MAN GK V+VAALDGTFQR GF DIL L+PLAE V KLTAVC
Sbjct: 103 --------FPDTVEFCEAMANKGKTVIVAALDGTFQREGFGDILKLVPLAESVIKLTAVC 154
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
M C+ +AAFTKR G E ++ +
Sbjct: 155 MQCYGEAAFTKRKGHEMKLEV 175
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/142 (60%), Positives = 105/142 (73%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDT-EKVATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
RR++R+Q ANY C++++YA D RY E +ATHD+Q + AV A +L L ++ DVIG
Sbjct: 37 RRMKRFQIANYSCLLIKYANDTRYTGDEGLATHDKQVVPAVPATKLKDLWTKAEEADVIG 96
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+DEGQFFPD V F E+MAN GK V+VAALDGTFQR GF DIL L+PLAE V KLTAVCM
Sbjct: 97 VDEGQFFPDTVEFCEAMANKGKTVIVAALDGTFQREGFGDILKLVPLAESVIKLTAVCMQ 156
Query: 138 CFRDAAFTKRIGQEK--EVILG 157
C+ +AAFTKR G E EVI G
Sbjct: 157 CYGEAAFTKRKGHEMKLEVIGG 178
>gi|403280450|ref|XP_003931731.1| PREDICTED: thymidine kinase, cytosolic [Saimiri boliviensis
boliviensis]
Length = 234
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVTQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVTQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|119609911|gb|EAW89505.1| thymidine kinase 1, soluble, isoform CRA_a [Homo sapiens]
gi|119609914|gb|EAW89508.1| thymidine kinase 1, soluble, isoform CRA_a [Homo sapiens]
Length = 276
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/230 (44%), Positives = 130/230 (56%), Gaps = 53/230 (23%)
Query: 128 VEKLTAVCMSCFR-----DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCM 182
V +L MSC + +K GQ +VILGPMFSGK+TEL+RR+RR+Q A Y+C+
Sbjct: 35 VRELPGGAMSCINLPTVLPGSPSKTRGQ-IQVILGPMFSGKSTELMRRVRRFQIAQYKCL 93
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDK 242
+++YAKD RY + THD+ + A+ A L + + VIGIDEGQF
Sbjct: 94 VIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQF--------- 143
Query: 243 YMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAAL 302
FPD+V F E+MANAGK V+VAAL
Sbjct: 144 -------------------------------------FPDIVEFCEAMANAGKTVIVAAL 166
Query: 303 DGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
DGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV +
Sbjct: 167 DGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEV 216
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 80 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 138
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 139 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 198
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 199 FREAAYTKRLGTEKEV 214
>gi|296203311|ref|XP_002748857.1| PREDICTED: thymidine kinase, cytosolic [Callithrix jacchus]
Length = 234
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|88854142|gb|ABD52560.1| thymidine kinase [Vaccinia virus]
Length = 177
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 123/204 (60%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLELITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E++I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIKI 159
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLELITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIKIIG 161
>gi|6646891|gb|AAF21104.1|AF163844_1 thymidine kinase [Cowpox virus]
Length = 176
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 2 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 60
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D V+GIDEGQF
Sbjct: 61 EATKLYDVLESITDFSVVGIDEGQF----------------------------------- 85
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 86 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 134
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 135 AVCMKCFKEASFSKRLGEETEIEI 158
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D V+GI
Sbjct: 22 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLYDVLESITDFSVVGI 80
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 81 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 140
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 141 FKEASFSKRLGEETEIEIIG 160
>gi|20178469|ref|NP_619890.1| CPXV105 protein [Cowpox virus]
gi|20153087|gb|AAM13548.1|AF482758_99 CPXV105 protein [Cowpox virus]
Length = 177
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLYDVLESITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLYDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|26351495|dbj|BAC39384.1| unnamed protein product [Mus musculus]
Length = 233
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + + VIGIDEGQF
Sbjct: 81 LRDVTQESLGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQESLGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172
>gi|6646887|gb|AAF21102.1|AF163842_1 thymidine kinase [Cotia virus]
gi|2570632|gb|AAB82192.1| thymidine kinase [BeAn 58058 virus]
Length = 176
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 2 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 60
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 61 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 85
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 86 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 134
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 135 AVCMKCFKEASFSKRLGEETEIEI 158
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 22 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 80
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 81 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 140
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 141 FKEASFSKRLGEETEIEIIG 160
>gi|66275891|ref|YP_232976.1| thymidine kinase [Vaccinia virus]
gi|56405060|sp|P68563.1|KITH_VACCV RecName: Full=Thymidine kinase
gi|56405061|sp|P68564.1|KITH_VACCC RecName: Full=Thymidine kinase
gi|61395|emb|CAA26016.1| F8 polypeptide thymidine kinase [2] [Vaccinia virus]
gi|335430|gb|AAA48082.1| putative J2R [Vaccinia virus Copenhagen]
gi|29692200|gb|AAO89373.1| thymidine kinase [Vaccinia virus WR]
gi|37551539|gb|AAQ93191.1| thymidine kinase [Vaccinia virus]
gi|38348961|gb|AAR17937.1| thymidine kinase [Vaccinia virus]
gi|44971446|gb|AAS49796.1| RPXV083 [Rabbitpox virus]
gi|56713465|gb|AAW23505.1| thymidine kinase [Vaccinia virus]
gi|56713749|gb|AAW23787.1| thymidine kinase [Vaccinia virus]
gi|71024940|gb|AAZ17453.1| thymidine kinase [Cowpox virus]
gi|88900712|gb|ABD57624.1| VACV090 [Vaccinia virus]
gi|90660332|gb|ABD97446.1| thymidine kinase [Cowpox virus]
gi|90819754|gb|ABD98564.1| VACV-DUKE-102 [Vaccinia virus]
gi|325558695|gb|ADZ30073.1| thymidine kinase [Cowpox virus]
gi|373447281|gb|AEY72667.1| thymidine kinase [Vaccinia virus]
gi|373447520|gb|AEY72905.1| thymidine kinase [Vaccinia virus]
gi|373447756|gb|AEY73140.1| thymidine kinase [Vaccinia virus]
gi|373447999|gb|AEY73382.1| thymidine kinase [Vaccinia virus]
gi|373448240|gb|AEY73622.1| thymidine kinase [Vaccinia virus]
gi|373448712|gb|AEY74092.1| thymidine kinase [Vaccinia virus]
gi|373448954|gb|AEY74333.1| thymidine kinase [Vaccinia virus]
gi|373449424|gb|AEY74801.1| thymidine kinase [Vaccinia virus]
gi|373449665|gb|AEY75041.1| thymidine kinase [Vaccinia virus]
gi|439965941|gb|AGB75815.1| thymidine kinase [Vaccinia virus]
Length = 177
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161
>gi|226958341|ref|NP_033413.2| thymidine kinase, cytosolic isoform 1 [Mus musculus]
gi|172046775|sp|P04184.3|KITH_MOUSE RecName: Full=Thymidine kinase, cytosolic
gi|252871|gb|AAB22782.1| thymidine kinase, TK {EC 2.7.1.21} [mice, Peptide, 233 aa]
gi|298946|gb|AAB26001.1| thymidine kinase [Mus sp.]
gi|15126565|gb|AAH12215.1| Thymidine kinase 1 [Mus musculus]
gi|26352894|dbj|BAC40077.1| unnamed protein product [Mus musculus]
gi|74226516|dbj|BAE23931.1| unnamed protein product [Mus musculus]
gi|148702690|gb|EDL34637.1| mCG19309, isoform CRA_b [Mus musculus]
gi|737917|prf||1923398A thymidine kinase
Length = 233
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + + VIGIDEGQF
Sbjct: 81 LRDVTQESLGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQESLGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 11/66 (16%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 148 KLTAV-CMECFREAAYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 196
Query: 264 TLANEN 269
T ++N
Sbjct: 197 TAGSDN 202
>gi|22095787|sp|O57203.1|KITH_VACCA RecName: Full=Thymidine kinase
gi|2772764|gb|AAB96503.1| thymidine kinase [Vaccinia virus]
gi|47088414|gb|AAT10484.1| thymidine kinase [Vaccinia virus]
gi|160857976|emb|CAM58264.1| thymidine kinase [Vaccinia virus Ankara]
gi|373448471|gb|AEY73852.1| thymidine kinase [Vaccinia virus]
Length = 177
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161
>gi|257167810|gb|ACV49687.1| thymidine kinase [Vaccinia virus]
Length = 175
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 1 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 59
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 60 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 84
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 85 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 133
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 134 AVCMKCFKEASFSKRLGEETEIEI 157
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 21 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 79
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 80 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 139
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 140 FKEASFSKRLGEETEIEIIG 159
>gi|325557834|gb|ADZ29216.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161
>gi|257167812|gb|ACV49688.1| thymidine kinase [Vaccinia virus]
Length = 174
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 1 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 59
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 60 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 84
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 85 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 133
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 134 AVCMKCFKEASFSKRLGEETEIEI 157
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 21 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 79
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 80 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 139
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 140 FKEASFSKRLGEETEIEIIG 159
>gi|325559335|gb|ADZ30710.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLCDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|224074420|ref|XP_002193289.1| PREDICTED: thymidine kinase, cytosolic [Taeniopygia guttata]
Length = 223
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y+C++V+YAKD RY + VSTHD+ + A+ A
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQLAQYQCLLVKYAKDTRYSSSGVSTHDKSTMEALPAGL 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 82 LQDVYQEALGAAVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MAN GK V+VAALDGTFQR F IL+L+PLAE V KL AVCM
Sbjct: 103 -------FPDIVEFCETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLNAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+A++TKR+G E+EV +
Sbjct: 156 ECFREASYTKRLGAEREVEV 175
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 101/136 (74%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++V+YAKD RY + V+THD+ + A+ A L + VIGI
Sbjct: 38 RRVRRFQLAQYQCLLVKYAKDTRYSSSGVSTHDKSTMEALPAGLLQDVYQEALGAAVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MAN GK V+VAALDGTFQR F IL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDIVEFCETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLNAVCMEC 157
Query: 139 FRDAAFTKRIGQEKEV 154
FR+A++TKR+G E+EV
Sbjct: 158 FREASYTKRLGAEREV 173
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSP 261
VEVIGG+DKY +VCR CY +K P + P
Sbjct: 173 VEVIGGADKYHSVCRACYFRKRPQQAGP 200
>gi|226838235|gb|ACO83358.1| thymidine kinase 1 [Anolis carolinensis]
Length = 233
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 117/200 (58%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY VSTHD+ + AVSA
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQIAQYKCLLIKYAKDTRYCVNGVSTHDRNTMEAVSACC 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 82 LKDVHQEALSSAVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD++ F E+MANAGK V+VAAL GTFQR F +IL L+PLAE V KL AVCM
Sbjct: 103 -------FPDIIEFCEAMANAGKTVIVAALGGTFQRKAFGNILHLVPLAESVVKLNAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+A++TKR+G EKEV +
Sbjct: 156 ECFREASYTKRLGAEKEVEV 175
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY V+THD+ + AVSA L + VIGI
Sbjct: 38 RRVRRFQIAQYKCLLIKYAKDTRYCVNGVSTHDRNTMEAVSACCLKDVHQEALSSAVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F E+MANAGK V+VAAL GTFQR F +IL L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDIIEFCEAMANAGKTVIVAALGGTFQRKAFGNILHLVPLAESVVKLNAVCMEC 157
Query: 139 FRDAAFTKRIGQEKEV 154
FR+A++TKR+G EKEV
Sbjct: 158 FREASYTKRLGAEKEV 173
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAP 256
VEVIGG+DKY +VCR CY +K P
Sbjct: 173 VEVIGGADKYHSVCRVCYFKKRP 195
>gi|158186787|ref|NP_434687.1| thymidine kinase, cytosolic [Rattus norvegicus]
gi|149054919|gb|EDM06736.1| rCG32815, isoform CRA_b [Rattus norvegicus]
Length = 232
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LKDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+A++TKR+G EKEV +
Sbjct: 155 ECFREASYTKRLGLEKEVEV 174
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLKDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+A++TKR+G EKEV
Sbjct: 157 FREASYTKRLGLEKEV 172
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 148 KLTAV-CMECFREASYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 196
Query: 264 TLANENAALNVPPPPEFPDV 283
T N+ + P E P V
Sbjct: 197 TADNKENYSVLGQPIEIPAV 216
>gi|202079|gb|AAA40454.1| thymidine kinase [Mus musculus]
Length = 233
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 118/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVTQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 11/66 (16%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 148 KLTAV-CMECFREAAYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 196
Query: 264 TLANEN 269
T ++N
Sbjct: 197 TAGSDN 202
>gi|297273738|ref|XP_001107944.2| PREDICTED: thymidine kinase, cytosolic isoform 3, partial [Macaca
mulatta]
Length = 304
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 129/230 (56%), Gaps = 53/230 (23%)
Query: 128 VEKLTAVCMSCFR-----DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCM 182
+ +L MSC + +K GQ +VILGPMFSGK+TEL+RR+RR+Q A Y+C+
Sbjct: 63 IRELPGGAMSCINLPTVLPGSPSKTRGQ-IQVILGPMFSGKSTELMRRVRRFQVAQYKCL 121
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDK 242
+++YAKD RY + THD+ + A+ A L + VIGIDEGQF
Sbjct: 122 VIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDAAQEALGVAVIGIDEGQF--------- 171
Query: 243 YMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAAL 302
FPD+V F E+MANAGK V+VAAL
Sbjct: 172 -------------------------------------FPDIVEFCEAMANAGKTVIVAAL 194
Query: 303 DGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
DGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV +
Sbjct: 195 DGTFQRKPFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEV 244
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + VIGI
Sbjct: 108 RRVRRFQVAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDAAQEALGVAVIGI 166
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 167 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGTILNLVPLAESVVKLTAVCMEC 226
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 227 FREAAYTKRLGTEKEV 242
>gi|164698438|ref|NP_003249.3| thymidine kinase, cytosolic [Homo sapiens]
gi|332849154|ref|XP_003315798.1| PREDICTED: thymidine kinase, cytosolic isoform 2 [Pan troglodytes]
gi|23503074|sp|P04183.2|KITH_HUMAN RecName: Full=Thymidine kinase, cytosolic
gi|14043853|gb|AAH07872.1| Thymidine kinase 1, soluble [Homo sapiens]
gi|14124928|gb|AAH07986.1| TK1 protein [Homo sapiens]
gi|30582721|gb|AAP35587.1| thymidine kinase 1, soluble [Homo sapiens]
gi|52632392|gb|AAH06484.1| Thymidine kinase 1, soluble [Homo sapiens]
gi|60656369|gb|AAX32748.1| thymidine kinase 1 [synthetic construct]
gi|60656371|gb|AAX32749.1| thymidine kinase 1 [synthetic construct]
gi|189067473|dbj|BAG37455.1| unnamed protein product [Homo sapiens]
gi|307686491|dbj|BAJ21176.1| thymidine kinase 1, soluble [synthetic construct]
gi|410217390|gb|JAA05914.1| thymidine kinase 1, soluble [Pan troglodytes]
gi|410254542|gb|JAA15238.1| thymidine kinase 1, soluble [Pan troglodytes]
Length = 234
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|345317661|ref|XP_001521037.2| PREDICTED: thymidine kinase, cytosolic-like [Ornithorhynchus
anatinus]
Length = 247
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 118/199 (59%), Gaps = 47/199 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY STHD+ + A+ A L
Sbjct: 37 VILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDVRYG-HSFSTHDRNTMEALPACVL 95
Query: 214 NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
+ + VIGIDEGQF
Sbjct: 96 RDVTQDALGVAVIGIDEGQF---------------------------------------- 115
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
FPD V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 116 ------FPDTVEFSEAMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCME 169
Query: 334 CFRDAAFTKRIGQEKEVRI 352
CFRDA++TKR+G EKEV +
Sbjct: 170 CFRDASYTKRLGAEKEVEV 188
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY +THD+ + A+ A L + + VIGI
Sbjct: 52 RRVRRFQIAQYKCLVIKYAKDVRYG-HSFSTHDRNTMEALPACVLRDVTQDALGVAVIGI 110
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 111 DEGQFFPDTVEFSEAMANAGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 170
Query: 139 FRDAAFTKRIGQEKEV 154
FRDA++TKR+G EKEV
Sbjct: 171 FRDASYTKRLGAEKEV 186
>gi|30584167|gb|AAP36332.1| Homo sapiens thymidine kinase 1, soluble [synthetic construct]
gi|33303757|gb|AAQ02392.1| thymidine kinase 1, soluble, partial [synthetic construct]
gi|60653309|gb|AAX29349.1| thymidine kinase 1 soluble [synthetic construct]
Length = 235
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|145580142|pdb|2ORV|A Chain A, Human Thymidine Kinase 1 In Complex With Tp4a
gi|145580143|pdb|2ORV|B Chain B, Human Thymidine Kinase 1 In Complex With Tp4a
Length = 234
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|202073|gb|AAA40451.1| cytosolic thymidine kinase [Mus musculus]
Length = 233
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 118/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVTQELLGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQELLGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 11/66 (16%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 148 KLTAV-CMECFREAAYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 196
Query: 264 TLANEN 269
T ++N
Sbjct: 197 TAGSDN 202
>gi|291415764|ref|XP_002724120.1| PREDICTED: thymidine kinase 1 [Oryctolagus cuniculus]
Length = 256
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 44 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDVRY-SHSFCTHDRNTMDALPACL 102
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 103 LRDVAQEALAVAVIGIDEGQF--------------------------------------- 123
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 124 -------FPDIVEFCEAMANSGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 176
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 177 ECFREAAYTKRLGSEKEVEV 196
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 60 RRVRRFQIAQYKCLVIKYAKDVRY-SHSFCTHDRNTMDALPACLLRDVAQEALAVAVIGI 118
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 119 DEGQFFPDIVEFCEAMANSGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 178
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 179 FREAAYTKRLGSEKEV 194
>gi|325558478|gb|ADZ29857.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|145687744|gb|ABP88849.1| thymidine kinase [Cowpox virus]
gi|325514109|gb|ADZ24103.1| thymidine kinase [Cowpox virus]
Length = 176
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|61680155|pdb|1W4R|A Chain A, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680156|pdb|1W4R|B Chain B, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680157|pdb|1W4R|C Chain C, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680158|pdb|1W4R|D Chain D, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680159|pdb|1W4R|E Chain E, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680160|pdb|1W4R|F Chain F, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680161|pdb|1W4R|G Chain G, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
gi|61680162|pdb|1W4R|H Chain H, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
Length = 195
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 23 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 82 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 103 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 156 ECFREAAYTKRLGTEKEVEV 175
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 39 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 98 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 157
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 158 FREAAYTKRLGTEKEV 173
>gi|6646889|gb|AAF21103.1|AF163843_1 thymidine kinase [Ectromelia virus]
Length = 176
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 2 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 60
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 61 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 85
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD++ F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 86 -----------FPDILEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 134
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 135 AVCMKCFKEASFSKRLGEETEIEI 158
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 22 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 80
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 81 DEGQFFPDILEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 140
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 141 FKEASFSKRLGEETEIEIIG 160
>gi|402901237|ref|XP_003913561.1| PREDICTED: thymidine kinase, cytosolic [Papio anubis]
gi|383421181|gb|AFH33804.1| thymidine kinase, cytosolic [Macaca mulatta]
Length = 234
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 118/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 81 LRDAAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + VIGI
Sbjct: 38 RRVRRFQVAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDAAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|22095806|sp|Q9JFB7.1|KITH_VACCT RecName: Full=Thymidine kinase
gi|6969741|gb|AAF33953.1| TJ2R [Vaccinia virus Tian Tan]
Length = 177
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++++GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLMIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161
>gi|22087365|gb|AAM90949.1| thymidine kinase [Aracatuba virus]
gi|71841844|gb|AAZ43191.1| thymidine kinase [Vaccinia virus]
Length = 164
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 120/199 (60%), Gaps = 47/199 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L
Sbjct: 1 LIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKL 59
Query: 214 NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
++ D VIGIDEGQF
Sbjct: 60 CDVLESITDFSVIGIDEGQF---------------------------------------- 79
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM
Sbjct: 80 ------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMK 133
Query: 334 CFRDAAFTKRIGQEKEVRI 352
CF++A+F+KR+G+E E+ I
Sbjct: 134 CFKEASFSKRLGEETEIEI 152
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 16 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 74
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 75 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 134
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 135 FKEASFSKRLGEETEIEIIG 154
>gi|148679866|gb|EDL11813.1| mCG10091 [Mus musculus]
Length = 234
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 118/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTIDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + + VIGIDEGQF
Sbjct: 81 LRDVTQESLSVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTIDALPACMLRDVTQESLSVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172
>gi|348558240|ref|XP_003464926.1| PREDICTED: thymidine kinase, cytosolic-like [Cavia porcellus]
Length = 233
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 120/201 (59%), Gaps = 48/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FSTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 81 LRDTTQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCEAMANSGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFR-DAAFTKRIGQEKEVRI 352
CFR +AA+TKR+GQEKEV +
Sbjct: 155 ECFRGEAAYTKRLGQEKEVEV 175
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/137 (59%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FSTHDRNTMEALPACLLRDTTQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCEAMANSGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FR-DAAFTKRIGQEKEV 154
FR +AA+TKR+GQEKEV
Sbjct: 157 FRGEAAYTKRLGQEKEV 173
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
VEVIGG+DKY +VCR CY +K+ ++ + TL N+ VP
Sbjct: 173 VEVIGGADKYHSVCRLCYFKKSSVQSA---TLDNKENCPMVP 211
>gi|197692237|dbj|BAG70082.1| thymidine kinase 1 soluble isoform [Homo sapiens]
Length = 234
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQGALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQGALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|30519468|emb|CAD90643.1| S2R protein [Cowpox virus]
gi|325559122|gb|ADZ30498.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|58177292|pdb|1XBT|A Chain A, Crystal Structure Of Human Thymidine Kinase 1
gi|58177293|pdb|1XBT|B Chain B, Crystal Structure Of Human Thymidine Kinase 1
gi|58177294|pdb|1XBT|C Chain C, Crystal Structure Of Human Thymidine Kinase 1
gi|58177295|pdb|1XBT|D Chain D, Crystal Structure Of Human Thymidine Kinase 1
gi|58177296|pdb|1XBT|E Chain E, Crystal Structure Of Human Thymidine Kinase 1
gi|58177297|pdb|1XBT|F Chain F, Crystal Structure Of Human Thymidine Kinase 1
gi|58177298|pdb|1XBT|G Chain G, Crystal Structure Of Human Thymidine Kinase 1
gi|58177299|pdb|1XBT|H Chain H, Crystal Structure Of Human Thymidine Kinase 1
Length = 193
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|77862254|gb|ABB04423.1| thymidine kinase, partial [Guarani P1 virus]
gi|77862256|gb|ABB04424.1| thymidine kinase, partial [Guarani P2 virus]
gi|267847121|gb|ACY80701.1| thymidine kinase [Vaccinia virus Mariana]
Length = 163
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 119/198 (60%), Gaps = 47/198 (23%)
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELN 214
I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L
Sbjct: 1 IIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLC 59
Query: 215 KLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
++ D VIGIDEGQF
Sbjct: 60 DVLESITDFSVIGIDEGQF----------------------------------------- 78
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 79 -----FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 133
Query: 335 FRDAAFTKRIGQEKEVRI 352
F++A+F+KR+G+E E+ I
Sbjct: 134 FKEASFSKRLGEETEIEI 151
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 15 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 73
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 74 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 133
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 134 FKEASFSKRLGEETEIEIIG 153
>gi|325558048|gb|ADZ29429.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD++ F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIIEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIIEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|355568969|gb|EHH25250.1| hypothetical protein EGK_09036 [Macaca mulatta]
gi|355754420|gb|EHH58385.1| hypothetical protein EGM_08220 [Macaca fascicularis]
Length = 269
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 117/198 (59%), Gaps = 47/198 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 81 LRDAAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGTILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEV 350
CFR+AA+TKR+G EKEV
Sbjct: 155 ECFREAAYTKRLGTEKEV 172
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + VIGI
Sbjct: 38 RRVRRFQVAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDAAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGTILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|339709|gb|AAA61187.1| thymidine kinase (EC 2.7.1.21) [Homo sapiens]
gi|339719|gb|AAA61191.1| thymidine kinase [Homo sapiens]
Length = 234
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD++ F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIMEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIMEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|225602|prf||1307188A thymidine kinase
Length = 234
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD++ F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIMEFKEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD++ F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIMEFKEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|53933295|ref|NP_990229.1| thymidine kinase, cytosolic [Gallus gallus]
gi|125427|sp|P04047.1|KITH_CHICK RecName: Full=Thymidine kinase, cytosolic
gi|212776|gb|AAA49096.1| thymidine kinase [Gallus gallus]
Length = 224
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 115/200 (57%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A YRC++V+YAKD RY T VSTHD+ + A A
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDRNTMEARPACA 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 82 LQDVYQEALGSAVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KL AVCM
Sbjct: 103 -------FPDIVEFCEKMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLNAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C+R+A++TKR+G E+EV +
Sbjct: 156 ECYREASYTKRLGAEREVEV 175
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 99/136 (72%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A YRC++V+YAKD RY T V+THD+ + A A L + VIGI
Sbjct: 38 RRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDRNTMEARPACALQDVYQEALGSAVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDIVEFCEKMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLNAVCMEC 157
Query: 139 FRDAAFTKRIGQEKEV 154
+R+A++TKR+G E+EV
Sbjct: 158 YREASYTKRLGAEREV 173
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 7/42 (16%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
VEVIGG+DKY +VCR CY QK P + L +EN NVP
Sbjct: 173 VEVIGGADKYHSVCRACYFQKRP------QQLGSENKE-NVP 207
>gi|197692491|dbj|BAG70209.1| thymidine kinase 1 soluble isoform [Homo sapiens]
Length = 234
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CF++AA+TKR+G EKEV +
Sbjct: 155 ECFQEAAYTKRLGTEKEVEV 174
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
F++AA+TKR+G EKEV
Sbjct: 157 FQEAAYTKRLGTEKEV 172
>gi|262118466|pdb|2WVJ|A Chain A, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118467|pdb|2WVJ|B Chain B, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118468|pdb|2WVJ|C Chain C, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118469|pdb|2WVJ|D Chain D, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118470|pdb|2WVJ|E Chain E, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118471|pdb|2WVJ|F Chain F, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118472|pdb|2WVJ|G Chain G, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
gi|262118473|pdb|2WVJ|H Chain H, Mutation Of Thr163 To Ser In Human Thymidine Kinase Shifts
The Specificity From Thymidine Towards The Nucleoside
Analogue Azidothymidine
Length = 193
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 119/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA++KR+G EKEV +
Sbjct: 155 ECFREAAYSKRLGTEKEVEV 174
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA++KR+G EKEV
Sbjct: 157 FREAAYSKRLGTEKEV 172
>gi|22164683|ref|NP_671596.1| EVM078 [Ectromelia virus]
gi|22123824|gb|AAM92382.1|AF523264_78 EVM078 [Ectromelia virus]
gi|383866798|gb|AFH54641.1| thymidine kinase [Ectromelia virus]
Length = 177
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVMDAVTDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETEIEI 159
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVMDAVTDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGTETEIEIIG 161
>gi|332176|gb|AAA80529.1| thymidine kinase [Monkeypox virus]
Length = 177
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+L ++ D VIGIDEGQF
Sbjct: 62 EVTKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPDVV F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDVVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETEIEI 159
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEVTKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPDVV F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDVVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGTETEIEIIG 161
>gi|410917293|ref|XP_003972121.1| PREDICTED: thymidine kinase, cytosolic-like [Takifugu rubripes]
Length = 231
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 116/200 (58%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY ++THD+ + AV A
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQLAQYKCLVIKYAKDTRYSDSGMATHDKNTMEAVPANR 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIG+DEGQF
Sbjct: 82 LGDVHSQALQVCVIGVDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK ++VAALDGTFQR F IL+L+PLAE V KL AVCM
Sbjct: 103 -------FPDIVEFCEEMANLGKTIIVAALDGTFQRKPFGSILNLVPLAESVVKLNAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CF++AA+TKRIG EKEV +
Sbjct: 156 QCFKEAAYTKRIGAEKEVEV 175
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 108/163 (66%), Gaps = 11/163 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY +ATHD+ + AV A L + + VIG+
Sbjct: 38 RRVRRFQLAQYKCLVIKYAKDTRYSDSGMATHDKNTMEAVPANRLGDVHSQALQVCVIGV 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK ++VAALDGTFQR F IL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDIVEFCEEMANLGKTIIVAALDGTFQRKPFGSILNLVPLAESVVKLNAVCMQC 157
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRC 181
F++AA+TKRIG EKEV E+I +YQ +C
Sbjct: 158 FKEAAYTKRIGAEKEV-----------EVIGGADKYQAVCRKC 189
>gi|51342246|gb|AAU01290.1| MPXV-WRAIR080 [Monkeypox virus]
gi|58220550|gb|AAW67838.1| MPXV-SL-080 [Monkeypox virus]
gi|59858886|gb|AAX09181.1| MPXV-COP-080 [Monkeypox virus]
gi|68448762|gb|AAY96885.1| thymidine kinase [Monkeypox virus]
gi|68449364|gb|AAY97484.1| thymidine kinase [Monkeypox virus]
gi|68449564|gb|AAY97683.1| thymidine kinase [Monkeypox virus]
Length = 177
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+L ++ D VIGIDEGQF
Sbjct: 62 EVTKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETEIEI 159
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEVTKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGTETEIEIIG 161
>gi|68448963|gb|AAY97085.1| thymidine kinase [Monkeypox virus]
gi|68449165|gb|AAY97286.1| thymidine kinase [Monkeypox virus]
gi|300872709|gb|ADK39111.1| thymidine kinase [Monkeypox virus]
gi|323098495|gb|ADX22733.1| thymidine kinase [Monkeypox virus]
gi|451327770|gb|AGF36642.1| thymidine kinase [Monkeypox virus]
gi|451327978|gb|AGF36849.1| thymidine kinase [Monkeypox virus]
gi|451328120|gb|AGF36990.1| thymidine kinase [Monkeypox virus]
Length = 177
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+L ++ D VIGIDEGQF
Sbjct: 62 EVTKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEVTKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|257167814|gb|ACV49689.1| thymidine kinase [Vaccinia virus]
Length = 161
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 118/197 (59%), Gaps = 47/197 (23%)
Query: 156 LGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNK 215
+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L
Sbjct: 1 IGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCD 59
Query: 216 LIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
++ D VIGIDEGQF
Sbjct: 60 VLESITDFSVIGIDEGQF------------------------------------------ 77
Query: 276 PPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 335
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM CF
Sbjct: 78 ----FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKCF 133
Query: 336 RDAAFTKRIGQEKEVRI 352
++A+F+KR+G+E E+ I
Sbjct: 134 KEASFSKRLGEETEIEI 150
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 14 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 72
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 73 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 132
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 133 FKEASFSKRLGEETEIEIIG 152
>gi|41054161|ref|NP_956126.1| thymidine kinase, cytosolic [Danio rerio]
gi|326672070|ref|XP_003199583.1| PREDICTED: thymidine kinase, cytosolic-like [Danio rerio]
gi|28277511|gb|AAH44148.1| Thymidine kinase 1, soluble [Danio rerio]
gi|37780420|gb|AAO64437.1| thymidine kinase 1 [Danio rerio]
gi|182891336|gb|AAI64324.1| Tk1 protein [Danio rerio]
Length = 230
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 114/200 (57%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y C++++YAKD RY ++THD + AV A
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQVAQYSCLLIKYAKDTRYSCTGMATHDMNTMEAVPANR 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + P VIGIDEGQF
Sbjct: 82 LRDVAPLALQACVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL AVCM
Sbjct: 103 -------FPDTVEFCEEMANMGKTIIVAALDGTFQRKAFGNILNLVPLAESVVKLNAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CF++AA+TKR+G EKEV +
Sbjct: 156 QCFKEAAYTKRLGAEKEVEV 175
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 98/136 (72%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y C++++YAKD RY +ATHD + AV A L + P VIGI
Sbjct: 38 RRVRRFQVAQYSCLLIKYAKDTRYSCTGMATHDMNTMEAVPANRLRDVAPLALQACVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDTVEFCEEMANMGKTIIVAALDGTFQRKAFGNILNLVPLAESVVKLNAVCMQC 157
Query: 139 FRDAAFTKRIGQEKEV 154
F++AA+TKR+G EKEV
Sbjct: 158 FKEAAYTKRLGAEKEV 173
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 19/28 (67%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSP 261
VEVIGGSDKY AVCR CY RSP
Sbjct: 173 VEVIGGSDKYHAVCRCCYGGLMKENRSP 200
>gi|18640326|ref|NP_570482.1| CMLV092 [Camelpox virus]
gi|18483002|gb|AAL73799.1|AF438165_89 thymidine kinase [Camelpox virus M-96]
gi|262219|gb|AAB24618.1| thymidine kinase [Camelpox virus]
gi|19718038|gb|AAG37563.1| CMP91R [Camelpox virus CMS]
Length = 177
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL +IPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDIIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL +IPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDIIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|373449183|gb|AEY74561.1| thymidine kinase [Vaccinia virus]
Length = 177
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN KIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEEKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN KIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEEKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161
>gi|335843|gb|AAA80461.1| thymidine kinase [Variola major virus]
Length = 177
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPDVV F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLT
Sbjct: 87 -----------FPDVVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E ++ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETKIEI 159
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPDVV F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDVVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E ++ I+G
Sbjct: 142 FKEASFSKRLGTETKIEIIG 161
>gi|325558264|gb|ADZ29644.1| thymidine kinase [Cowpox virus]
gi|325558910|gb|ADZ30287.1| thymidine kinase [Cowpox virus]
Length = 177
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGM-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGM-GLWTHDKNNFEALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|238231569|ref|NP_001153968.1| thymidine kinase [Oncorhynchus mykiss]
gi|223049427|gb|ACM80353.1| thymidine kinase [Oncorhynchus mykiss]
Length = 233
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 121/207 (58%), Gaps = 47/207 (22%)
Query: 146 KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
K IGQ +VI GPMFSGK+TELIRR+RR+Q A Y C++V+YAKD RY + ++THD+ +
Sbjct: 16 KAIGQ-IQVIFGPMFSGKSTELIRRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTM 74
Query: 206 TAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
AV A L+ + VIGIDEGQF
Sbjct: 75 EAVPANCLSDVRSLALQACVIGIDEGQF-------------------------------- 102
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FPD+V F E MAN GK ++VAALDGTFQR F DIL+L+PLAE V
Sbjct: 103 --------------FPDIVQFCEEMANMGKTIIVAALDGTFQRKPFGDILNLVPLAESVV 148
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KL AVCM C+++AA+TKR+G EKEV +
Sbjct: 149 KLNAVCMQCYKEAAYTKRLGAEKEVEV 175
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y C++V+YAKD RY + +ATHD+ + AV A L+ + VIGI
Sbjct: 38 RRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTMEAVPANCLSDVRSLALQACVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK ++VAALDGTFQR F DIL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDIVQFCEEMANMGKTIIVAALDGTFQRKPFGDILNLVPLAESVVKLNAVCMQC 157
Query: 139 FRDAAFTKRIGQEKEV 154
+++AA+TKR+G EKEV
Sbjct: 158 YKEAAYTKRLGAEKEV 173
>gi|426239221|ref|XP_004013524.1| PREDICTED: thymidine kinase, cytosolic [Ovis aries]
Length = 251
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 110/148 (74%), Gaps = 1/148 (0%)
Query: 7 DDRINPYIVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL 66
++ + P+ RR+RR+Q A Y+C++++YA+D RY + +THD+ + A+ A L +
Sbjct: 39 EEALLPFSTELMRRVRRFQIAQYKCLVIKYARDTRYSS-LFSTHDRNTMEALPACLLRDV 97
Query: 67 IPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
I + + VIGIDEGQFFPD+V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE
Sbjct: 98 IQDAQGVAVIGIDEGQFFPDIVEFCENMANSGKTVIVAALDGTFQRKAFGTILNLVPLAE 157
Query: 127 CVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
V KLTAVCM CFR+AA+TKR+G EKEV
Sbjct: 158 SVVKLTAVCMECFREAAYTKRLGVEKEV 185
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 111/189 (58%), Gaps = 47/189 (24%)
Query: 164 TTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDI 223
+TEL+RR+RR+Q A Y+C++++YA+D RY + STHD+ + A+ A L +I + +
Sbjct: 46 STELMRRVRRFQIAQYKCLVIKYARDTRYSS-LFSTHDRNTMEALPACLLRDVIQDAQGV 104
Query: 224 DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDV 283
VIGIDEGQF FPD+
Sbjct: 105 AVIGIDEGQF----------------------------------------------FPDI 118
Query: 284 VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKR 343
V F E+MAN+GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR
Sbjct: 119 VEFCENMANSGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMECFREAAYTKR 178
Query: 344 IGQEKEVRI 352
+G EKEV +
Sbjct: 179 LGVEKEVEV 187
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + V + VEVIGG+DKY +VCR CY +K + +
Sbjct: 161 KLTAV-CMECFREAAYTKRLGV-----EKEVEVIGGADKYHSVCRLCYFKKPSGQPAVLD 214
Query: 264 TLAN-ENAALNVPPPPEFPDV 283
+ N EN + + P E V
Sbjct: 215 SEENKENCPMTLGKPAEAAGV 235
>gi|61403504|gb|AAH91758.1| Thymidine kinase 1 [Mus musculus]
Length = 233
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 118/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILG MFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGLMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + + VIGIDEGQF
Sbjct: 81 LRDVTQESLGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQESLGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 11/66 (16%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 148 KLTAV-CMECFREAAYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 196
Query: 264 TLANEN 269
T ++N
Sbjct: 197 TAGSDN 202
>gi|9627600|ref|NP_042123.1| hypothetical protein VARVgp079 [Variola virus]
gi|417222|sp|P04364.2|KITH_VAR67 RecName: Full=Thymidine kinase
gi|62355|emb|CAA47578.1| thymidine kinase [Variola virus]
gi|262438|gb|AAB24675.1| thymidine kinase [Variola major virus]
gi|297259|emb|CAA49020.1| L2R [Variola virus]
gi|438997|gb|AAA60827.1| homolog of vaccinia virus CDS J2R (thymidine kinase); putative
[Variola major virus]
gi|94483930|gb|ABF23046.1| thymidine kinase [Variola virus]
gi|94484133|gb|ABF23248.1| thymidine kinase [Variola virus]
gi|94484542|gb|ABF23655.1| thymidine kinase [Variola virus]
gi|94484740|gb|ABF23852.1| thymidine kinase [Variola virus]
gi|94484938|gb|ABF24049.1| thymidine kinase [Variola virus]
gi|94485136|gb|ABF24246.1| thymidine kinase [Variola virus]
gi|94485338|gb|ABF24447.1| thymidine kinase [Variola virus]
gi|94485541|gb|ABF24649.1| thymidine kinase [Variola virus]
gi|94485946|gb|ABF25052.1| thymidine kinase [Variola virus]
gi|94486147|gb|ABF25252.1| thymidine kinase [Variola virus]
gi|94486350|gb|ABF25454.1| thymidine kinase [Variola virus]
gi|94486553|gb|ABF25656.1| thymidine kinase [Variola virus]
gi|94486755|gb|ABF25857.1| thymidine kinase [Variola virus]
gi|94486958|gb|ABF26059.1| thymidine kinase [Variola virus]
gi|94487161|gb|ABF26261.1| thymidine kinase [Variola virus]
gi|94487567|gb|ABF26665.1| thymidine kinase [Variola virus]
gi|94487768|gb|ABF26865.1| thymidine kinase [Variola virus]
gi|94488175|gb|ABF27270.1| thymidine kinase [Variola virus]
gi|94488375|gb|ABF27469.1| thymidine kinase [Variola virus]
gi|94488575|gb|ABF27668.1| thymidine kinase [Variola virus]
gi|94488776|gb|ABF27868.1| thymidine kinase [Variola virus]
gi|94489176|gb|ABF28266.1| thymidine kinase [Variola virus]
gi|94489376|gb|ABF28465.1| thymidine kinase [Variola virus]
gi|94489578|gb|ABF28666.1| thymidine kinase [Variola virus]
gi|94489778|gb|ABF28865.1| thymidine kinase [Variola virus]
gi|94490187|gb|ABF29272.1| thymidine kinase [Variola virus]
gi|109724122|gb|ABG43248.1| thymidine kinase [Variola virus]
gi|109724326|gb|ABG43451.1| thymidine kinase [Variola virus]
gi|109724528|gb|ABG43652.1| thymidine kinase [Variola virus]
gi|109724733|gb|ABG43856.1| thymidine kinase [Variola virus]
gi|109724936|gb|ABG44058.1| thymidine kinase [Variola virus]
gi|109725140|gb|ABG44261.1| thymidine kinase [Variola virus]
gi|109725345|gb|ABG44465.1| thymidine kinase [Variola virus]
gi|109725548|gb|ABG44667.1| thymidine kinase [Variola virus]
gi|109725752|gb|ABG44870.1| thymidine kinase [Variola virus]
gi|109725955|gb|ABG45072.1| thymidine kinase [Variola virus]
gi|109726159|gb|ABG45275.1| thymidine kinase [Variola virus]
gi|109726565|gb|ABG45679.1| thymidine kinase [Variola virus]
gi|745197|prf||2015436CN L2R gene
Length = 177
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E ++ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETKIEI 159
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 111/165 (67%), Gaps = 12/165 (7%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMI 183
F++A+F+KR+G E ++ E+I I YQ +C I
Sbjct: 142 FKEASFSKRLGTETKI-----------EIIGGIDMYQSVCRKCYI 175
>gi|5830640|emb|CAB54679.1| M2R protein [Variola minor virus]
gi|94483725|gb|ABF22842.1| thymidine kinase [Variola virus]
gi|94484338|gb|ABF23452.1| thymidine kinase [Variola virus]
gi|94485743|gb|ABF24850.1| thymidine kinase [Variola virus]
gi|94487363|gb|ABF26462.1| thymidine kinase [Variola virus]
gi|94487972|gb|ABF27068.1| thymidine kinase [Variola virus]
gi|94489982|gb|ABF29068.1| thymidine kinase [Variola virus]
Length = 177
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E ++ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETKIEI 159
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 111/165 (67%), Gaps = 12/165 (7%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMI 183
F++A+F+KR+G E ++ E+I I YQ +C I
Sbjct: 142 FKEASFSKRLGAETKI-----------EIIGGIDMYQSVCRKCYI 175
>gi|111184281|gb|ABH08201.1| HSPV095 [Horsepox virus]
Length = 177
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLELITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN KIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEEKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLELITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN KIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEEKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161
>gi|347300224|ref|NP_001231423.1| thymidine kinase, cytosolic [Cricetulus griseus]
gi|125428|sp|P09768.1|KITH_CRIGR RecName: Full=Thymidine kinase, cytosolic
gi|457429|gb|AAA37022.1| thymidine kinase [Cricetulus griseus]
gi|344241789|gb|EGV97892.1| Thymidine kinase, cytosolic [Cricetulus griseus]
Length = 234
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 117/200 (58%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A +C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQNKCLVIKYAKDTRYSSS-FSTHDRNTMDALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 81 LRDVAQEALGAAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEVMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A +C++++YAKD RY + +THD+ + A+ A L + VIGI
Sbjct: 38 RRVRRFQIAQNKCLVIKYAKDTRYSSS-FSTHDRNTMDALPACLLRDVAQEALGAAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCEVMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIK 258
VEVIGG+DKY +VCR CY +K+ ++
Sbjct: 172 VEVIGGADKYHSVCRVCYFKKSSVQ 196
>gi|320166035|gb|EFW42934.1| thymidine kinase [Capsaspora owczarzaki ATCC 30864]
Length = 215
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 113/200 (56%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGKTTELIRR+RR+Q A CM+V+YAKD+RY +STHD+ L A +A
Sbjct: 20 QVIFGPMFSGKTTELIRRLRRFQVAQQSCMVVKYAKDNRYSEAGISTHDRSILKATAATV 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + +VIGIDEGQF
Sbjct: 80 LQDIATEARHFNVIGIDEGQF--------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPDVV F+E MA AGK V+VAALDGTFQR F +L L+PLAE V KLTAVCM
Sbjct: 101 -------FPDVVEFSEQMAKAGKTVIVAALDGTFQRKPFGRVLELVPLAESVVKLTAVCM 153
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
+C DA FTKR+G E + +
Sbjct: 154 NCANDAPFTKRLGAETAIEV 173
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/141 (58%), Positives = 100/141 (70%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A CM+V+YAKD+RY ++THD+ L A +A L + + +VIGI
Sbjct: 36 RRLRRFQVAQQSCMVVKYAKDNRYSEAGISTHDRSILKATAATVLQDIATEARHFNVIGI 95
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPDVV F+E MA AGK V+VAALDGTFQR F +L L+PLAE V KLTAVCM+C
Sbjct: 96 DEGQFFPDVVEFSEQMAKAGKTVIVAALDGTFQRKPFGRVLELVPLAESVVKLTAVCMNC 155
Query: 139 FRDAAFTKRIGQEK--EVILG 157
DA FTKR+G E EVI G
Sbjct: 156 ANDAPFTKRLGAETAIEVIGG 176
>gi|196013900|ref|XP_002116810.1| hypothetical protein TRIADDRAFT_31584 [Trichoplax adhaerens]
gi|190580528|gb|EDV20610.1| hypothetical protein TRIADDRAFT_31584, partial [Trichoplax
adhaerens]
Length = 201
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 116/199 (58%), Gaps = 46/199 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+ILGPMFSGKTTEL+RR+RR Q N C+I++YA D+RYD + V+THD Q A+S+ +L
Sbjct: 1 LILGPMFSGKTTELMRRVRRLQIGNQSCVIIKYANDNRYDKDGVATHDLQIAKAISSNDL 60
Query: 214 NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
+ + VIGIDEGQF
Sbjct: 61 FSIESQAESYGVIGIDEGQF---------------------------------------- 80
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
FPDVV FAE MAN GK+V+VAALDGTFQR GF D L+LIPLAE V KL+AVCM
Sbjct: 81 ------FPDVVPFAEHMANKGKLVIVAALDGTFQRKGFGDFLNLIPLAEDVMKLSAVCML 134
Query: 334 CFRDAAFTKRIGQEKEVRI 352
C+ + AFTKR+ E+ V +
Sbjct: 135 CYSEGAFTKRLSSEQTVEV 153
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 103/141 (73%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q N C+I++YA D+RYD + VATHD Q A+S+ +L + + VIGI
Sbjct: 16 RRVRRLQIGNQSCVIIKYANDNRYDKDGVATHDLQIAKAISSNDLFSIESQAESYGVIGI 75
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPDVV FAE MAN GK+V+VAALDGTFQR GF D L+LIPLAE V KL+AVCM C
Sbjct: 76 DEGQFFPDVVPFAEHMANKGKLVIVAALDGTFQRKGFGDFLNLIPLAEDVMKLSAVCMLC 135
Query: 139 FRDAAFTKRIGQEK--EVILG 157
+ + AFTKR+ E+ EVI G
Sbjct: 136 YSEGAFTKRLSSEQTVEVIGG 156
>gi|119390440|pdb|2J87|A Chain A, Structure Of Vaccinia Virus Thymidine Kinase In Complex
With Dttp: Insights For Drug Design
gi|119390441|pdb|2J87|B Chain B, Structure Of Vaccinia Virus Thymidine Kinase In Complex
With Dttp: Insights For Drug Design
gi|119390442|pdb|2J87|C Chain C, Structure Of Vaccinia Virus Thymidine Kinase In Complex
With Dttp: Insights For Drug Design
gi|119390443|pdb|2J87|D Chain D, Structure Of Vaccinia Virus Thymidine Kinase In Complex
With Dttp: Insights For Drug Design
Length = 177
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 121/204 (59%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLQSITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+L+ L+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLLILSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLQSITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+L+ L+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLLILSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161
>gi|94488977|gb|ABF28068.1| thymidine kinase [Variola virus]
gi|109726362|gb|ABG45477.1| thymidine kinase [Variola virus]
Length = 177
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEVITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E ++ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETKIEI 159
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 111/165 (67%), Gaps = 12/165 (7%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEVITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMI 183
F++A+F+KR+G E ++ E+I I YQ +C I
Sbjct: 142 FKEASFSKRLGTETKI-----------EIIGGIDMYQSVCRKCYI 175
>gi|113195274|ref|YP_717404.1| thymidine kinase [Taterapox virus]
gi|71024938|gb|AAZ17452.1| thymidine kinase [Taterapox virus]
gi|90660550|gb|ABD97663.1| thymidine kinase [Taterapox virus]
Length = 177
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 119/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+ RYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVTRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 104/140 (74%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ RYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVTRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|82408797|gb|ABB73192.1| thymidine kinase, partial [Vaccinia virus]
Length = 163
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 117/198 (59%), Gaps = 47/198 (23%)
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELN 214
I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D RY T + THD+ A+ A +L
Sbjct: 1 IIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDSRYGT-GLWTHDKNNFEALEATKLC 59
Query: 215 KLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
++ D VIGIDEGQF
Sbjct: 60 DVLESITDFSVIGIDEGQF----------------------------------------- 78
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
FPD+V F E AN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 79 -----FPDIVEFCERTANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 133
Query: 335 FRDAAFTKRIGQEKEVRI 352
F++A+F+KR+G+E E+ I
Sbjct: 134 FKEASFSKRLGEETEIEI 151
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 15 RRVRRYQIAQYKCVTIKYSNDSRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 73
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E AN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 74 DEGQFFPDIVEFCERTANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 133
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G+E E+ I+G
Sbjct: 134 FKEASFSKRLGEETEIEIIG 153
>gi|194216594|ref|XP_001491131.2| PREDICTED: thymidine kinase, cytosolic-like [Equus caballus]
Length = 210
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 104/136 (76%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A +L + VIGI
Sbjct: 11 RRVRRFQIAQYKCLVIKYAKDTRYSS-NFSTHDRNTMEALPACQLRDAAQEALGVAVIGI 69
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 70 DEGQFFPDIVEFSEAMANAGKTVIVAALDGTFQRKAFGAILNLVPLAESVVKLTAVCMEC 129
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 130 FREAAYTKRLGTEKEV 145
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 115/194 (59%), Gaps = 47/194 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A +L
Sbjct: 1 MFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSS-NFSTHDRNTMEALPACQLRDAAQ 59
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
+ VIGIDEGQF
Sbjct: 60 EALGVAVIGIDEGQF--------------------------------------------- 74
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
FPD+V F+E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+A
Sbjct: 75 -FPDIVEFSEAMANAGKTVIVAALDGTFQRKAFGAILNLVPLAESVVKLTAVCMECFREA 133
Query: 339 AFTKRIGQEKEVRI 352
A+TKR+G EKEV +
Sbjct: 134 AYTKRLGTEKEVEV 147
>gi|17974999|ref|NP_536513.1| L2R [Monkeypox virus Zaire-96-I-16]
gi|22096356|sp|P04363.2|KITH_MONPV RecName: Full=Thymidine kinase
gi|17529866|gb|AAL40544.1|AF380138_86 L2R [Monkeypox virus Zaire-96-I-16]
Length = 177
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 119/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPM SGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMLSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+L ++ D VIGIDEGQF
Sbjct: 62 EVTKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEVTKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|442750309|gb|JAA67314.1| Putative thymidine kinase [Ixodes ricinus]
Length = 204
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 119/200 (59%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I+GPMFS KTTEL+RR++RYQ AN++C+I++Y D RY+ E +STHD Q + A+ A
Sbjct: 25 QLIIGPMFSRKTTELMRRLKRYQVANHKCLIIKYVGDTRYEEEHISTHDSQAMPAIKART 84
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L++L D VIGIDEGQF
Sbjct: 85 LSELGNLQADFRVIGIDEGQF--------------------------------------- 105
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F+E MA GKIVVVAALDGT+QR GF I+ L+PL+E V KLTAVCM
Sbjct: 106 -------FADIVEFSEKMAELGKIVVVAALDGTYQRKGFPTIMELVPLSESVIKLTAVCM 158
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C+ +A++TKR+G EKEV I
Sbjct: 159 VCYAEASYTKRLGMEKEVEI 178
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 106/140 (75%), Gaps = 1/140 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++RYQ AN++C+I++Y D RY+ E ++THD Q + A+ A L++L D VIGI
Sbjct: 41 RRLKRYQVANHKCLIIKYVGDTRYEEEHISTHDSQAMPAIKARTLSELGNLQADFRVIGI 100
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+V F+E MA GKIVVVAALDGT+QR GF I+ L+PL+E V KLTAVCM C
Sbjct: 101 DEGQFFADIVEFSEKMAELGKIVVVAALDGTYQRKGFPTIMELVPLSESVIKLTAVCMVC 160
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
+ +A++TKR+G EKEV I+G
Sbjct: 161 YAEASYTKRLGMEKEVEIIG 180
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 19/21 (90%)
Query: 234 VEVIGGSDKYMAVCRECYKQK 254
VE+IGG+DKYMAVCR CY ++
Sbjct: 176 VEIIGGADKYMAVCRSCYSKE 196
>gi|225708976|gb|ACO10334.1| Thymidine kinase [Caligus rogercresseyi]
Length = 195
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 117/200 (58%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I+GPMFSGK+TELIRR+RRYQ A Y+CM ++YAKD RYD ++THD+ L A+ V
Sbjct: 25 QLIIGPMFSGKSTELIRRLRRYQSATYKCMSIKYAKDVRYDNGGIATHDKTVLEAIPVVS 84
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ K+ VIGIDEGQF
Sbjct: 85 LEEITERAKEYHVIGIDEGQF--------------------------------------- 105
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+VSF E+MANAGKIV+VAALD TFQR GF +I+ LIPL+E V KL +VCM
Sbjct: 106 -------FPDIVSFCENMANAGKIVLVAALDATFQRKGFPNIMELIPLSENVTKLNSVCM 158
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C + ++TKR KEV +
Sbjct: 159 VCHGEGSYTKRTTDSKEVEL 178
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 101/138 (73%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+CM ++YAKD RYD +ATHD+ L A+ V L ++ K+ VIGI
Sbjct: 41 RRLRRYQSATYKCMSIKYAKDVRYDNGGIATHDKTVLEAIPVVSLEEITERAKEYHVIGI 100
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+VSF E+MANAGKIV+VAALD TFQR GF +I+ LIPL+E V KL +VCM C
Sbjct: 101 DEGQFFPDIVSFCENMANAGKIVLVAALDATFQRKGFPNIMELIPLSENVTKLNSVCMVC 160
Query: 139 FRDAAFTKRIGQEKEVIL 156
+ ++TKR KEV L
Sbjct: 161 HGEGSYTKRTTDSKEVEL 178
>gi|323098692|gb|ADX22929.1| thymidine kinase [Monkeypox virus]
Length = 177
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 119/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+L ++ D VIGIDEGQF
Sbjct: 62 EVTKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR FN+I +LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNIXNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 104/140 (74%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEVTKLCDVLEAITDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+I +LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNIXNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161
>gi|225719542|gb|ACO15617.1| Thymidine kinase, cytosolic [Caligus clemensi]
Length = 196
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 116/201 (57%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDT-EKVSTHDQQKLTAVSAV 211
++I+GPMFSGK+TELIRR+RRYQ A Y C+ V+YAKD RYD E +STHD+ L AV AV
Sbjct: 25 QLIIGPMFSGKSTELIRRLRRYQSATYTCLNVKYAKDTRYDNGESISTHDKIALEAVPAV 84
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L + KD VIGIDEGQF
Sbjct: 85 SLEDIREKAKDFQVIGIDEGQF-------------------------------------- 106
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+VSF ESMAN GKIV+VAALD TFQR GF +I+ LIPL+E V KL +VC
Sbjct: 107 --------FPDIVSFCESMANEGKIVLVAALDATFQRKGFPNIMELIPLSENVTKLNSVC 158
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
M C + ++TKR KEV +
Sbjct: 159 MVCHGEGSYTKRTTDSKEVEV 179
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDT-EKVATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
RR+RRYQ A Y C+ V+YAKD RYD E ++THD+ L AV AV L + KD VIG
Sbjct: 41 RRLRRYQSATYTCLNVKYAKDTRYDNGESISTHDKIALEAVPAVSLEDIREKAKDFQVIG 100
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFFPD+VSF ESMAN GKIV+VAALD TFQR GF +I+ LIPL+E V KL +VCM
Sbjct: 101 IDEGQFFPDIVSFCESMANEGKIVLVAALDATFQRKGFPNIMELIPLSENVTKLNSVCMV 160
Query: 138 CFRDAAFTKRIGQEKEV 154
C + ++TKR KEV
Sbjct: 161 CHGEGSYTKRTTDSKEV 177
>gi|225709914|gb|ACO10803.1| Thymidine kinase [Caligus rogercresseyi]
Length = 195
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 117/200 (58%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I+GPMFSGK+TELIRR+RRYQ A Y+CM ++YAKD RYD ++THD+ L A+ V
Sbjct: 25 QLIIGPMFSGKSTELIRRLRRYQSATYKCMNIKYAKDVRYDNGGIATHDKTVLEAIPVVS 84
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ K+ VIGIDEGQF
Sbjct: 85 LEEITERAKEYHVIGIDEGQF--------------------------------------- 105
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+VSF E+MANAGKIV+VAALD TFQR GF +I+ LIPL+E V KL +VCM
Sbjct: 106 -------FPDIVSFCENMANAGKIVLVAALDATFQRKGFPNIMELIPLSENVTKLNSVCM 158
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C + ++TKR KEV +
Sbjct: 159 VCHGEGSYTKRTTDSKEVEL 178
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 101/138 (73%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+CM ++YAKD RYD +ATHD+ L A+ V L ++ K+ VIGI
Sbjct: 41 RRLRRYQSATYKCMNIKYAKDVRYDNGGIATHDKTVLEAIPVVSLEEITERAKEYHVIGI 100
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+VSF E+MANAGKIV+VAALD TFQR GF +I+ LIPL+E V KL +VCM C
Sbjct: 101 DEGQFFPDIVSFCENMANAGKIVLVAALDATFQRKGFPNIMELIPLSENVTKLNSVCMVC 160
Query: 139 FRDAAFTKRIGQEKEVIL 156
+ ++TKR KEV L
Sbjct: 161 HGEGSYTKRTTDSKEVEL 178
>gi|348532604|ref|XP_003453796.1| PREDICTED: thymidine kinase, cytosolic-like [Oreochromis niloticus]
Length = 231
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 115/200 (57%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y C++++YAKD RY ++THD+ + AV A
Sbjct: 22 QVIFGPMFSGKSTELMRRVRRFQIAQYNCLVIKYAKDTRYSDAGMATHDKSTMEAVPANS 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + P VIGIDEGQF
Sbjct: 82 LRDVRPLALRACVIGIDEGQF--------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL AVCM
Sbjct: 103 -------FPDAVEFCEEMANLGKTIIVAALDGTFQRKPFGNILNLVPLAESVVKLHAVCM 155
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CF++AA+TKRIG EKEV +
Sbjct: 156 QCFKEAAYTKRIGAEKEVEV 175
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 99/136 (72%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y C++++YAKD RY +ATHD+ + AV A L + P VIGI
Sbjct: 38 RRVRRFQIAQYNCLVIKYAKDTRYSDAGMATHDKSTMEAVPANSLRDVRPLALRACVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDAVEFCEEMANLGKTIIVAALDGTFQRKPFGNILNLVPLAESVVKLHAVCMQC 157
Query: 139 FRDAAFTKRIGQEKEV 154
F++AA+TKRIG EKEV
Sbjct: 158 FKEAAYTKRIGAEKEV 173
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKR--SPFKTLANENAALN 273
VEVIGG+DKY AVCR+CY K SPF+ +NA +
Sbjct: 173 VEVIGGADKYQAVCRKCYGGLMVDKENSSPFRNETPQNALIG 214
>gi|209731272|gb|ACI66505.1| Thymidine kinase, cytosolic [Salmo salar]
Length = 243
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 120/207 (57%), Gaps = 47/207 (22%)
Query: 146 KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
K IGQ +VI GPMFSGK+TELIRR+RR+Q A Y C++V+YAKD RY + ++THD+ +
Sbjct: 26 KAIGQ-IQVIFGPMFSGKSTELIRRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTM 84
Query: 206 TAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
AV A L+ + VIGIDEGQF
Sbjct: 85 EAVPANCLSDVRSLALQACVIGIDEGQF-------------------------------- 112
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FPD V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V
Sbjct: 113 --------------FPDTVEFCEEMANMGKTIIVAALDGTFQRKPFGNILNLVPLAESVV 158
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KL AVCM C+++AA+TKR+G EKEV +
Sbjct: 159 KLNAVCMQCYKEAAYTKRLGAEKEVEV 185
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 100/136 (73%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y C++V+YAKD RY + +ATHD+ + AV A L+ + VIGI
Sbjct: 48 RRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTMEAVPANCLSDVRSLALQACVIGI 107
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL AVCM C
Sbjct: 108 DEGQFFPDTVEFCEEMANMGKTIIVAALDGTFQRKPFGNILNLVPLAESVVKLNAVCMQC 167
Query: 139 FRDAAFTKRIGQEKEV 154
+++AA+TKR+G EKEV
Sbjct: 168 YKEAAYTKRLGAEKEV 183
>gi|213512420|ref|NP_001134920.1| Thymidine kinase, cytosolic [Salmo salar]
gi|209737200|gb|ACI69469.1| Thymidine kinase, cytosolic [Salmo salar]
Length = 243
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 120/207 (57%), Gaps = 47/207 (22%)
Query: 146 KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
K IGQ +VI GPMFSGK+TELIRR+RR+Q A Y C++V+YAKD RY + ++THD+ +
Sbjct: 26 KAIGQ-IQVIFGPMFSGKSTELIRRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTM 84
Query: 206 TAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
AV A L+ + VIGIDEGQF
Sbjct: 85 EAVPANCLSDVRSLALQACVIGIDEGQF-------------------------------- 112
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FPD V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V
Sbjct: 113 --------------FPDTVEFCEEMANMGKTIIVAALDGTFQRKPFGNILNLVPLAESVV 158
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KL AVCM C+++AA+TKR+G EKEV +
Sbjct: 159 KLNAVCMQCYKEAAYTKRLGAEKEVEV 185
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 100/136 (73%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y C++V+YAKD RY + +ATHD+ + AV A L+ + VIGI
Sbjct: 48 RRVRRFQIAQYNCLVVKYAKDTRYSEKGMATHDKNTMEAVPANCLSDVRSLALQACVIGI 107
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F E MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL AVCM C
Sbjct: 108 DEGQFFPDTVEFCEEMANMGKTIIVAALDGTFQRKPFGNILNLVPLAESVVKLNAVCMQC 167
Query: 139 FRDAAFTKRIGQEKEV 154
+++AA+TKR+G EKEV
Sbjct: 168 YKEAAYTKRLGAEKEV 183
>gi|154412901|ref|XP_001579482.1| ThyB [Trichomonas vaginalis G3]
gi|121913689|gb|EAY18496.1| ThyB, putative [Trichomonas vaginalis G3]
Length = 348
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 169/357 (47%), Gaps = 89/357 (24%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD---IDV 75
RRI R + RC++++Y KD RY T+KV+THDQ A+ N+L+PH + +
Sbjct: 23 RRIDRAELGRRRCVVMKYDKDQRYSTDKVSTHDQYMHDAIPC---NELMPHFNECLAYET 79
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IGIDEGQFFPDVV F+E +AN GK V+VAALDGTFQR F +L L+ E + KLTAVC
Sbjct: 80 IGIDEGQFFPDVVEFSEKLANYGKTVIVAALDGTFQRKPFGSVLELMAKCESLTKLTAVC 139
Query: 136 MSCFRDAAFTKR---------IG-------------------QEKEVILGPMFSGKTTEL 167
+AAF+KR IG E + +GP+ SGKTTEL
Sbjct: 140 CKTGGEAAFSKRTVNSDSIELIGGAESYTAASRSAFFGTNTSGEIHLTVGPVKSGKTTEL 199
Query: 168 IRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIG 227
+R + RY A + + +R E V H K +L I + DVIG
Sbjct: 200 LRVLNRYVIAGRKVVCIR--------PEDVVDHHNPKFEMKLVRDLPD-IASLSNYDVIG 250
Query: 228 IDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFA 287
IDE Q FK LA+ +A
Sbjct: 251 IDEAQ----------------------------KFKNLAD------------------WA 264
Query: 288 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
+ +AN+GKIV+V+A+DG Q + I+ L P E V KL +VC A F+ I
Sbjct: 265 DELANSGKIVMVSAVDGDEQHHAYPGIIELFPRCEKVMKLDSVCPLTGLPAPFSAVI 321
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 104/194 (53%), Gaps = 52/194 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV++GPMF+GKTTE++RRI R + RC++++Y KD RY T+KVSTHDQ A+
Sbjct: 7 EVVVGPMFAGKTTEMLRRIDRAELGRRRCVVMKYDKDQRYSTDKVSTHDQYMHDAIPC-- 64
Query: 213 LNKLIPHTKD---IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
N+L+PH + + IGIDEGQF
Sbjct: 65 -NELMPHFNECLAYETIGIDEGQF------------------------------------ 87
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
FPDVV F+E +AN GK V+VAALDGTFQR F +L L+ E + KLTA
Sbjct: 88 ----------FPDVVEFSEKLANYGKTVIVAALDGTFQRKPFGSVLELMAKCESLTKLTA 137
Query: 330 VCMSCFRDAAFTKR 343
VC +AAF+KR
Sbjct: 138 VCCKTGGEAAFSKR 151
>gi|395826830|ref|XP_003786617.1| PREDICTED: thymidine kinase, cytosolic [Otolemur garnettii]
Length = 236
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 117/200 (58%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR++R+Q A Y+C++++Y+KD RY + THD+ + A+ A
Sbjct: 22 QVIFGPMFSGKSTELMRRVQRFQIAQYKCLVIKYSKDTRYSSN-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + VIGIDEGQF
Sbjct: 81 LRDVAQEALGAAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+P+AE V KLTAVCM
Sbjct: 102 -------FPDIVEFCETMANAGKTVIVAALDGTFQRKAFGPILNLVPVAESVVKLTAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/136 (57%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R+Q A Y+C++++Y+KD RY + THD+ + A+ A L + VIGI
Sbjct: 38 RRVQRFQIAQYKCLVIKYSKDTRYSSN-FCTHDRNTMEALPACLLRDVAQEALGAAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+P+AE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVEFCETMANAGKTVIVAALDGTFQRKAFGPILNLVPVAESVVKLTAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172
>gi|432847927|ref|XP_004066219.1| PREDICTED: thymidine kinase, cytosolic-like [Oryzias latipes]
Length = 223
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 115/200 (57%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI GPMFSGK+TEL+RR+RR+Q A Y+C++++YA D RY V+THD+ + A+ A
Sbjct: 21 QVIFGPMFSGKSTELLRRVRRFQVAQYKCLVIKYAGDTRYSDTGVATHDKNTMEAIPANS 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+ + VIGIDEGQF
Sbjct: 81 LSDVRAAALKACVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD V F+E MAN GK V+VAALD TFQR F +ILSL+PLAE V KL AVCM
Sbjct: 102 -------FPDTVEFSEEMANLGKTVIVAALDATFQRKPFGNILSLVPLAESVVKLHAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C+R+AA+TKRIG EKEV +
Sbjct: 155 QCYREAAYTKRIGVEKEVEV 174
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 113/178 (63%), Gaps = 14/178 (7%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YA D RY VATHD+ + A+ A L+ + VIGI
Sbjct: 37 RRVRRFQVAQYKCLVIKYAGDTRYSDTGVATHDKNTMEAIPANSLSDVRAAALKACVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F+E MAN GK V+VAALD TFQR F +ILSL+PLAE V KL AVCM C
Sbjct: 97 DEGQFFPDTVEFSEEMANLGKTVIVAALDATFQRKPFGNILSLVPLAESVVKLHAVCMQC 156
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK 196
+R+AA+TKRIG EKEV E+I +YQ C ++D+ +T K
Sbjct: 157 YREAAYTKRIGVEKEV-----------EVIGGADKYQAV---CRTCYGGQEDKENTRK 200
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 226 IGIDEGQFVEVIGGSDKYMAVCRECY---KQKAPIKRSPFKTLANENAAL 272
IG+++ VEVIGG+DKY AVCR CY + K +++P + A+L
Sbjct: 166 IGVEKE--VEVIGGADKYQAVCRTCYGGQEDKENTRKTPIRAGKEVEASL 213
>gi|22095802|sp|Q90029.1|KITH_RACVI RecName: Full=Thymidine kinase
gi|473607|gb|AAA93128.1| thymidine kinase [Raccoonpox virus]
gi|71024942|gb|AAZ17454.1| thymidine kinase [Raccoonpox virus]
Length = 177
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 116/204 (56%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y D RY T + THD+ +A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCITIKYTNDTRYGT-GLWTHDKHNFSAM 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+L +I D VIGIDEGQF
Sbjct: 62 ETTKLLNIIDAVTDFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR F I +LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCEYMANNGKIVIVAALDGTFQRKPFTTISNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETEIEI 159
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 101/140 (72%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y D RY T + THD+ +A+ +L +I D VIGI
Sbjct: 23 RRVRRYQIAQYKCITIKYTNDTRYGT-GLWTHDKHNFSAMETTKLLNIIDAVTDFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR F I +LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCEYMANNGKIVIVAALDGTFQRKPFTTISNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGTETEIEIIG 161
>gi|123475775|ref|XP_001321063.1| thymidine kinase family protein [Trichomonas vaginalis G3]
gi|121903882|gb|EAY08840.1| thymidine kinase family protein [Trichomonas vaginalis G3]
Length = 350
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 167/354 (47%), Gaps = 89/354 (25%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD---IDV 75
RRI R ++ + R ++++Y KD RY KV+THD+ A+ N L+PH ++ +V
Sbjct: 23 RRINRAEHGHRRVVVMKYDKDQRYSVNKVSTHDEYMHDAIPC---NMLLPHLEECLGYEV 79
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IG+DEGQFFPDVV F+E +AN G+ V+VAALDGTFQR F +L L+ E + KL+AVC
Sbjct: 80 IGVDEGQFFPDVVEFSEKLANFGRTVIVAALDGTFQRKPFGKVLDLMSKCESITKLSAVC 139
Query: 136 MSCFRDAAFTKRI----------GQEKEV------------------ILGPMFSGKTTEL 167
+AAF+KRI G E V +GP+ SGKTTEL
Sbjct: 140 SQTGSEAAFSKRIVNSTDVELIGGSESYVAASRAAFFGIQTSGMINLTVGPIKSGKTTEL 199
Query: 168 IRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIG 227
+R + RY A + + +R + V Q L ++ ELN+ D+IG
Sbjct: 200 LRVLNRYLIAGRKAICLRPESAHDFHKSNVEIKFIQNLPSIE--ELNQY-------DIIG 250
Query: 228 IDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFA 287
IDE Q F ++ +A
Sbjct: 251 IDEAQ----------------------------------------------NFENIADWA 264
Query: 288 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFT 341
+ +AN+GK+V+V+A+DG + I+ L P E V KL ++C A FT
Sbjct: 265 DELANSGKVVMVSAVDGNENHVAYPSIVELFPRCEKVTKLDSICPLTGLPAPFT 318
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 108/203 (53%), Gaps = 52/203 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPMF+GKTTE++RRI R ++ + R ++++Y KD RY KVSTHD+ A+
Sbjct: 7 EVIVGPMFAGKTTEMLRRINRAEHGHRRVVVMKYDKDQRYSVNKVSTHDEYMHDAIPC-- 64
Query: 213 LNKLIPHTKD---IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
N L+PH ++ +VIG+DEGQF
Sbjct: 65 -NMLLPHLEECLGYEVIGVDEGQF------------------------------------ 87
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
FPDVV F+E +AN G+ V+VAALDGTFQR F +L L+ E + KL+A
Sbjct: 88 ----------FPDVVEFSEKLANFGRTVIVAALDGTFQRKPFGKVLDLMSKCESITKLSA 137
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
VC +AAF+KRI +V +
Sbjct: 138 VCSQTGSEAAFSKRIVNSTDVEL 160
>gi|328866111|gb|EGG14497.1| hypothetical protein DFA_12272 [Dictyostelium fasciculatum]
Length = 215
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 113/200 (56%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+TEL+RRIRR AN +C++++Y D RY EK+STHD Q AV +
Sbjct: 12 EVIFGPMFSGKSTELLRRIRRQTIANKKCLVIKYQGDTRYSVEKMSTHDHQMWAAVPCDK 71
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + DVIG+DEGQF
Sbjct: 72 LENVQLDCLQFDVIGVDEGQF--------------------------------------- 92
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+VSF E+MAN GKIV+VAALDGTFQR F +L LIPLAE V KL AVCM
Sbjct: 93 -------FPDIVSFCETMANLGKIVIVAALDGTFQRRPFGSVLELIPLAENVTKLHAVCM 145
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C++DAAF+KR+ EV++
Sbjct: 146 ICYQDAAFSKRMTSSTEVQL 165
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 97/138 (70%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRIRR AN +C++++Y D RY EK++THD Q AV +L + DVIG+
Sbjct: 28 RRIRRQTIANKKCLVIKYQGDTRYSVEKMSTHDHQMWAAVPCDKLENVQLDCLQFDVIGV 87
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+VSF E+MAN GKIV+VAALDGTFQR F +L LIPLAE V KL AVCM C
Sbjct: 88 DEGQFFPDIVSFCETMANLGKIVIVAALDGTFQRRPFGSVLELIPLAENVTKLHAVCMIC 147
Query: 139 FRDAAFTKRIGQEKEVIL 156
++DAAF+KR+ EV L
Sbjct: 148 YQDAAFSKRMTSSTEVQL 165
>gi|119609913|gb|EAW89507.1| thymidine kinase 1, soluble, isoform CRA_c [Homo sapiens]
Length = 207
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 11 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 69
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 70 DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 129
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 130 FREAAYTKRLGTEKEV 145
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 113/194 (58%), Gaps = 47/194 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L +
Sbjct: 1 MFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQ 59
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
+ VIGIDEGQF
Sbjct: 60 EALGVAVIGIDEGQF--------------------------------------------- 74
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+A
Sbjct: 75 -FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREA 133
Query: 339 AFTKRIGQEKEVRI 352
A+TKR+G EKEV +
Sbjct: 134 AYTKRLGTEKEVEV 147
>gi|15150505|ref|NP_150500.1| LSDV066 thymidine kinase [Lumpy skin disease virus NI-2490]
gi|125426|sp|P16600.1|KITH_SHEVK RecName: Full=Thymidine kinase
gi|221123|dbj|BAA00324.1| thymidine kinase [Sheeppox virus]
gi|15149077|gb|AAK85027.1| LSDV066 thymidine kinase [Lumpy skin disease virus NI-2490]
gi|22595601|gb|AAN02634.1| thymidine kinase [Lumpy skin disease virus NW-LW]
gi|22595759|gb|AAN02791.1| thymidine kinase [lumpy skin disease virus]
Length = 177
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 117/200 (58%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I+GPMFSGK+TELIR ++RYQ A Y+C +V+Y KD RY V THD ++A+S
Sbjct: 7 HLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLKDIRYGNS-VYTHDNNHVSAISTTL 65
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ + D+IGIDEGQF
Sbjct: 66 LYDVVDKIMNFDIIGIDEGQF--------------------------------------- 86
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+VSF+E+MAN GKI+++AALD TFQR FNDIL LIPL+E V KL AVCM
Sbjct: 87 -------FKDIVSFSENMANMGKIIIIAALDSTFQRKEFNDILKLIPLSEKVTKLNAVCM 139
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C++DAAF+KRI +EKE+ +
Sbjct: 140 ECYKDAAFSKRITKEKEIEL 159
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y+C +V+Y KD RY V THD ++A+S L ++ + D+IGI
Sbjct: 23 RIVKRYQIAQYKCCVVKYLKDIRYGNS-VYTHDNNHVSAISTTLLYDVVDKIMNFDIIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+VSF+E+MAN GKI+++AALD TFQR FNDIL LIPL+E V KL AVCM C
Sbjct: 82 DEGQFFKDIVSFSENMANMGKIIIIAALDSTFQRKEFNDILKLIPLSEKVTKLNAVCMEC 141
Query: 139 FRDAAFTKRIGQEKEVIL 156
++DAAF+KRI +EKE+ L
Sbjct: 142 YKDAAFSKRITKEKEIEL 159
>gi|432118114|gb|ELK38004.1| Thymidine kinase, cytosolic [Myotis davidii]
Length = 368
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 103/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R+Q A Y+C++++YAKD RY ++ +THD+ + A+ A L + + VIGI
Sbjct: 2 RRVQRFQIAQYKCLVIKYAKDTRYSSQ-FSTHDRNTMEALPASLLRDVAQEAMGVAVIGI 60
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK V+VAALDGTFQR F IL L+PLAE V KL AVCM C
Sbjct: 61 DEGQFFPDIVEFSEAMANAGKTVIVAALDGTFQRKAFGTILHLVPLAESVVKLNAVCMEC 120
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 121 FREAAYTKRLGLEKEV 136
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 104/183 (56%), Gaps = 47/183 (25%)
Query: 168 IRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIG 227
+RR++R+Q A Y+C++++YAKD RY ++ STHD+ + A+ A L + + VIG
Sbjct: 1 MRRVQRFQIAQYKCLVIKYAKDTRYSSQ-FSTHDRNTMEALPASLLRDVAQEAMGVAVIG 59
Query: 228 IDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFA 287
IDEGQF FPD+V F+
Sbjct: 60 IDEGQF----------------------------------------------FPDIVEFS 73
Query: 288 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQE 347
E+MANAGK V+VAALDGTFQR F IL L+PLAE V KL AVCM CFR+AA+TKR+G E
Sbjct: 74 EAMANAGKTVIVAALDGTFQRKAFGTILHLVPLAESVVKLNAVCMECFREAAYTKRLGLE 133
Query: 348 KEV 350
KEV
Sbjct: 134 KEV 136
>gi|411147447|ref|NP_001258658.1| thymidine kinase, cytosolic isoform 2 [Mus musculus]
gi|148702689|gb|EDL34636.1| mCG19309, isoform CRA_a [Mus musculus]
Length = 197
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + + VIGI
Sbjct: 2 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQESLGVAVIGI 60
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 61 DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 120
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 121 FREAAYTKRLGLEKEV 136
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 104/185 (56%), Gaps = 47/185 (25%)
Query: 168 IRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIG 227
+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A L + + + VIG
Sbjct: 1 MRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQESLGVAVIG 59
Query: 228 IDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFA 287
IDEGQF FPD+V F
Sbjct: 60 IDEGQF----------------------------------------------FPDIVDFC 73
Query: 288 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQE 347
E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G E
Sbjct: 74 EMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLE 133
Query: 348 KEVRI 352
KEV +
Sbjct: 134 KEVEV 138
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 112 KLTAV-CMECFREAAYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 160
Query: 264 TLANENAALNVPPPP 278
T ++N V P
Sbjct: 161 TAGSDNKNCLVLGQP 175
>gi|345107262|ref|YP_004821427.1| thymidine kinase [Yoka poxvirus]
gi|344267336|gb|AEN03663.1| thymidine kinase [Yoka poxvirus]
Length = 177
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 116/200 (58%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++ILGPMFSGK+TELIR ++RYQ A Y C+++ ++ D RY V THD +A+ +
Sbjct: 7 QLILGPMFSGKSTELIRIVKRYQIAKYNCIVINHSSDIRYGISNVFTHDNNSYSAIQTSK 66
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+ LI ++ VIGIDEGQF
Sbjct: 67 LSDLIDIVENFTVIGIDEGQF--------------------------------------- 87
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F E+MAN GKIV+VAALDGTF+R F ++L+LIPL+E V KLTAVCM
Sbjct: 88 -------FQDIVEFCENMANKGKIVIVAALDGTFKRKPFGNVLNLIPLSETVTKLTAVCM 140
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CF+DA+F+KRIG E E+ I
Sbjct: 141 KCFKDASFSKRIGTETEIEI 160
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 102/140 (72%), Gaps = 1/140 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y C+++ ++ D RY V THD +A+ +L+ LI ++ VIGI
Sbjct: 23 RIVKRYQIAKYNCIVINHSSDIRYGISNVFTHDNNSYSAIQTSKLSDLIDIVENFTVIGI 82
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+V F E+MAN GKIV+VAALDGTF+R F ++L+LIPL+E V KLTAVCM C
Sbjct: 83 DEGQFFQDIVEFCENMANKGKIVIVAALDGTFKRKPFGNVLNLIPLSETVTKLTAVCMKC 142
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F+DA+F+KRIG E E+ I+G
Sbjct: 143 FKDASFSKRIGTETEIEIIG 162
>gi|326930815|ref|XP_003211536.1| PREDICTED: thymidine kinase, cytosolic-like [Meleagris gallopavo]
Length = 193
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 100/136 (73%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++V+YAKD RY T V+THD+ + A A L + VIGI
Sbjct: 7 RRVRRFQLAQYQCLLVKYAKDTRYCTTGVSTHDRNTMEARPACALKDVYQEALGSAVIGI 66
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MANAGK V+VAALDGTFQR F IL+L+PLAE V KL AVCM C
Sbjct: 67 DEGQFFPDIVEFCEKMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLNAVCMEC 126
Query: 139 FRDAAFTKRIGQEKEV 154
+R+A++TKR+G E+EV
Sbjct: 127 YREASYTKRLGAEREV 142
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 106/189 (56%), Gaps = 46/189 (24%)
Query: 164 TTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDI 223
TTEL+RR+RR+Q A Y+C++V+YAKD RY T VSTHD+ + A A L +
Sbjct: 2 TTELMRRVRRFQLAQYQCLLVKYAKDTRYCTTGVSTHDRNTMEARPACALKDVYQEALGS 61
Query: 224 DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDV 283
VIGIDEGQF FPD+
Sbjct: 62 AVIGIDEGQF----------------------------------------------FPDI 75
Query: 284 VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKR 343
V F E MANAGK V+VAALDGTFQR F IL+L+PLAE V KL AVCM C+R+A++TKR
Sbjct: 76 VEFCEKMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLNAVCMECYREASYTKR 135
Query: 344 IGQEKEVRI 352
+G E+EV +
Sbjct: 136 LGAEREVEV 144
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 7/42 (16%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
VEVIGG+DKY +VCR CY QK P + L +EN NVP
Sbjct: 142 VEVIGGADKYHSVCRACYFQKRP------QQLGSENKE-NVP 176
>gi|21492519|ref|NP_659638.1| Thymidine kinase [Sheeppox virus]
Length = 177
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 117/200 (58%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I+GPMFSGK+TELIR ++RYQ A Y+C +V+Y KD RY V THD ++A+S
Sbjct: 7 HLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLKDIRYGNS-VYTHDNNHISAISTTL 65
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ + D+IGIDEGQF
Sbjct: 66 LYDVVDKIMNFDIIGIDEGQF--------------------------------------- 86
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+VSF+E+MAN GKI++++ALD TFQR FNDIL LIPL+E V KL AVCM
Sbjct: 87 -------FKDIVSFSENMANMGKIIIISALDSTFQRKEFNDILKLIPLSEKVTKLNAVCM 139
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C++DAAF+KRI +EKE+ +
Sbjct: 140 ECYKDAAFSKRITKEKEIEL 159
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y+C +V+Y KD RY V THD ++A+S L ++ + D+IGI
Sbjct: 23 RIVKRYQIAQYKCCVVKYLKDIRYGNS-VYTHDNNHISAISTTLLYDVVDKIMNFDIIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+VSF+E+MAN GKI++++ALD TFQR FNDIL LIPL+E V KL AVCM C
Sbjct: 82 DEGQFFKDIVSFSENMANMGKIIIISALDSTFQRKEFNDILKLIPLSEKVTKLNAVCMEC 141
Query: 139 FRDAAFTKRIGQEKEVIL 156
++DAAF+KRI +EKE+ L
Sbjct: 142 YKDAAFSKRITKEKEIEL 159
>gi|351698088|gb|EHB01007.1| Thymidine kinase, cytosolic [Heterocephalus glaber]
Length = 240
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/136 (59%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L VIGI
Sbjct: 46 RRVRRFQIAQYKCLVIKYAKDTRYSS-GFSTHDRNTMEALPACLLRDTAQEALGAAVIGI 104
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 105 DEGQFFPDIVEFCEGMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 164
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 165 FREAAYTKRLGLEKEV 180
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 106/189 (56%), Gaps = 47/189 (24%)
Query: 164 TTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDI 223
+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A L
Sbjct: 41 STELMRRVRRFQIAQYKCLVIKYAKDTRYSS-GFSTHDRNTMEALPACLLRDTAQEALGA 99
Query: 224 DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDV 283
VIGIDEGQF FPD+
Sbjct: 100 AVIGIDEGQF----------------------------------------------FPDI 113
Query: 284 VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKR 343
V F E MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR
Sbjct: 114 VEFCEGMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKR 173
Query: 344 IGQEKEVRI 352
+G EKEV +
Sbjct: 174 LGLEKEVEV 182
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 6/57 (10%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRS 260
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY +K+ ++ +
Sbjct: 156 KLTAV-CMECFREAAYTKRL---GLEKE--VEVIGGADKYHSVCRLCYFKKSSVQNA 206
>gi|149054920|gb|EDM06737.1| rCG32815, isoform CRA_c [Rattus norvegicus]
Length = 196
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 2 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLKDVAQEALGVAVIGI 60
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 61 DEGQFFPDIVDFCETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 120
Query: 139 FRDAAFTKRIGQEKEV 154
FR+A++TKR+G EKEV
Sbjct: 121 FREASYTKRLGLEKEV 136
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 104/185 (56%), Gaps = 47/185 (25%)
Query: 168 IRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIG 227
+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A L + + VIG
Sbjct: 1 MRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLKDVAQEALGVAVIG 59
Query: 228 IDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFA 287
IDEGQF FPD+V F
Sbjct: 60 IDEGQF----------------------------------------------FPDIVDFC 73
Query: 288 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQE 347
E+MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+A++TKR+G E
Sbjct: 74 ETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREASYTKRLGLE 133
Query: 348 KEVRI 352
KEV +
Sbjct: 134 KEVEV 138
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 112 KLTAV-CMECFREASYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 160
Query: 264 TLANENAALNVPPPPEFPDV 283
T N+ + P E P V
Sbjct: 161 TADNKENYSVLGQPIEIPAV 180
>gi|202075|gb|AAA40452.1| cytosolic thymidine kinase [Mus musculus]
Length = 206
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 11 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQELLGVAVIGI 69
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 70 DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 129
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 130 FREAAYTKRLGLEKEV 145
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 112/194 (57%), Gaps = 47/194 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A L +
Sbjct: 1 MFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQ 59
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
+ VIGIDEGQF
Sbjct: 60 ELLGVAVIGIDEGQF--------------------------------------------- 74
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
FPD+V F E MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+A
Sbjct: 75 -FPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREA 133
Query: 339 AFTKRIGQEKEVRI 352
A+TKR+G EKEV +
Sbjct: 134 AYTKRLGLEKEVEV 147
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 121 KLTAV-CMECFREAAYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 169
Query: 264 TLANENAALNVPPPP 278
T ++N V P
Sbjct: 170 TAGSDNKNCLVLGQP 184
>gi|390345617|ref|XP_784788.3| PREDICTED: thymidine kinase, cytosolic-like [Strongylocentrotus
purpuratus]
Length = 232
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 105/140 (75%), Gaps = 1/140 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI+RYQ AN+ C++V+Y KD RYD + VATHD Q A S +L+ + ++ +VIGI
Sbjct: 35 RRIKRYQIANHYCLLVKYDKDTRYDKDGVATHDMQVCKATSTSDLSSIAELAEEYEVIGI 94
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F E MAN GK+++VAALDGT+QR GF DIL+L+P+AE V KL AVCM C
Sbjct: 95 DEGQFFPDCVKFCEEMANQGKVIIVAALDGTYQRKGFGDILNLVPIAESVIKLNAVCMHC 154
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
+ +A++T+RIG E V I+G
Sbjct: 155 YNEASYTRRIGCETAVEIIG 174
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 107/188 (56%), Gaps = 46/188 (24%)
Query: 165 TELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDID 224
TELIRRI+RYQ AN+ C++V+Y KD RYD + V+THD Q A S +L+ + ++ +
Sbjct: 31 TELIRRIKRYQIANHYCLLVKYDKDTRYDKDGVATHDMQVCKATSTSDLSSIAELAEEYE 90
Query: 225 VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVV 284
VIGIDEGQF FPD V
Sbjct: 91 VIGIDEGQF----------------------------------------------FPDCV 104
Query: 285 SFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
F E MAN GK+++VAALDGT+QR GF DIL+L+P+AE V KL AVCM C+ +A++T+RI
Sbjct: 105 KFCEEMANQGKVIIVAALDGTYQRKGFGDILNLVPIAESVIKLNAVCMHCYNEASYTRRI 164
Query: 345 GQEKEVRI 352
G E V I
Sbjct: 165 GCETAVEI 172
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 234 VEVIGGSDKYMAVCRECY 251
VE+IGG+DKYMAVCR+CY
Sbjct: 170 VEIIGGADKYMAVCRDCY 187
>gi|126290351|ref|XP_001368151.1| PREDICTED: thymidine kinase, cytosolic-like [Monodelphis domestica]
Length = 234
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 118/200 (59%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFS K+TEL+ R++R+Q A Y+C++++Y KD RY ++ STHDQ + A+ A
Sbjct: 22 QVILGPMFSRKSTELMHRVQRFQIAQYKCLVIKYTKDTRY-SKNFSTHDQNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + + VIGIDEGQF
Sbjct: 81 LWDVAQNALAVTVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F+E+MANAGK ++VAALDGTFQR +IL+L+PL E + KL AVCM
Sbjct: 102 -------FPDIVEFSETMANAGKTIIVAALDGTFQRKALGNILNLMPLTESMVKLIAVCM 154
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGMEKEVEV 174
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 102/136 (75%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R++R+Q A Y+C++++Y KD RY ++ +THDQ + A+ A L + + + VIGI
Sbjct: 38 HRVQRFQIAQYKCLVIKYTKDTRY-SKNFSTHDQNTMEALPACLLWDVAQNALAVTVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F+E+MANAGK ++VAALDGTFQR +IL+L+PL E + KL AVCM C
Sbjct: 97 DEGQFFPDIVEFSETMANAGKTIIVAALDGTFQRKALGNILNLMPLTESMVKLIAVCMEC 156
Query: 139 FRDAAFTKRIGQEKEV 154
FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGMEKEV 172
>gi|317601883|ref|NP_001187508.1| thymidine kinase cytosolic [Ictalurus punctatus]
gi|308323197|gb|ADO28735.1| thymidine kinase cytosolic [Ictalurus punctatus]
Length = 231
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 118/206 (57%), Gaps = 46/206 (22%)
Query: 147 RIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLT 206
+I + +VI GPMFSGK+TEL+RR+RR+Q A Y C++++YA+D RY ++THD+ +
Sbjct: 16 KIRGQIQVIFGPMFSGKSTELMRRVRRFQVAQYNCLVIKYARDTRYSDTGMATHDKNTME 75
Query: 207 AVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
AV A L + VIGIDEGQF
Sbjct: 76 AVPANCLRDVYSRALQACVIGIDEGQF--------------------------------- 102
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
FPD V F E+MAN GK ++VAALDGTFQR F +IL+L+PLAE V K
Sbjct: 103 -------------FPDTVEFCEAMANMGKTIIVAALDGTFQRKPFGNILNLVPLAESVVK 149
Query: 327 LTAVCMSCFRDAAFTKRIGQEKEVRI 352
L AVCM CF++A++TKR+G E+EV +
Sbjct: 150 LNAVCMQCFKEASYTKRLGAEQEVEV 175
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 99/136 (72%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y C++++YA+D RY +ATHD+ + AV A L + VIGI
Sbjct: 38 RRVRRFQVAQYNCLVIKYARDTRYSDTGMATHDKNTMEAVPANCLRDVYSRALQACVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F E+MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDTVEFCEAMANMGKTIIVAALDGTFQRKPFGNILNLVPLAESVVKLNAVCMQC 157
Query: 139 FRDAAFTKRIGQEKEV 154
F++A++TKR+G E+EV
Sbjct: 158 FKEASYTKRLGAEQEV 173
>gi|308322327|gb|ADO28301.1| thymidine kinase cytosolic [Ictalurus furcatus]
Length = 231
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 118/206 (57%), Gaps = 46/206 (22%)
Query: 147 RIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLT 206
+I + +VI GPMFSGK+TEL+RR+RR+Q A Y C++++YA+D RY ++THD+ +
Sbjct: 16 KIRGQIQVIFGPMFSGKSTELMRRVRRFQVAQYNCLVIKYARDTRYSDTGMATHDKNTME 75
Query: 207 AVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
AV A L + VIGIDEGQF
Sbjct: 76 AVPANCLRDVYSRALQACVIGIDEGQF--------------------------------- 102
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
FPD V F E+MAN GK ++VAALDGTFQR F +IL+L+PLAE V K
Sbjct: 103 -------------FPDTVEFCEAMANMGKTIIVAALDGTFQRKPFGNILNLVPLAESVVK 149
Query: 327 LTAVCMSCFRDAAFTKRIGQEKEVRI 352
L AVCM CF++A++TKR+G E+EV +
Sbjct: 150 LNAVCMQCFKEASYTKRLGAEQEVEV 175
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/136 (55%), Positives = 99/136 (72%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y C++++YA+D RY +ATHD+ + AV A L + VIGI
Sbjct: 38 RRVRRFQVAQYNCLVIKYARDTRYSDTGMATHDKNTMEAVPANCLRDVYSRALQACVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD V F E+MAN GK ++VAALDGTFQR F +IL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQFFPDTVEFCEAMANMGKTIIVAALDGTFQRKPFGNILNLVPLAESVVKLNAVCMQC 157
Query: 139 FRDAAFTKRIGQEKEV 154
F++A++TKR+G E+EV
Sbjct: 158 FKEASYTKRLGAEQEV 173
>gi|297701905|ref|XP_002827935.1| PREDICTED: thymidine kinase, cytosolic [Pongo abelii]
Length = 237
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 118/203 (58%), Gaps = 50/203 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LRDVAQEALGVTVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRT---GFNDILSLIPLAECVEKLTA 329
FPD++ F E+MANAGK V+VAALDGTF + F IL+L+PLAE V KLTA
Sbjct: 102 -------FPDIMEFCEAMANAGKTVIVAALDGTFLSSMSQPFGAILNLVPLAESVVKLTA 154
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
VCM CFR+AA+TKR+G EKEV +
Sbjct: 155 VCMECFREAAYTKRLGTEKEVEV 177
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 101/139 (72%), Gaps = 4/139 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVTVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRT---GFNDILSLIPLAECVEKLTAVC 135
DEGQFFPD++ F E+MANAGK V+VAALDGTF + F IL+L+PLAE V KLTAVC
Sbjct: 97 DEGQFFPDIMEFCEAMANAGKTVIVAALDGTFLSSMSQPFGAILNLVPLAESVVKLTAVC 156
Query: 136 MSCFRDAAFTKRIGQEKEV 154
M CFR+AA+TKR+G EKEV
Sbjct: 157 MECFREAAYTKRLGTEKEV 175
>gi|71024944|gb|AAZ17455.1| thymidine kinase [Volepox virus]
Length = 177
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 115/204 (56%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ +A
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCITIKYSNDNRYGT-GLWTHDRNNFSAT 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L ++ + VIGIDEGQF
Sbjct: 62 ETTNLLTIVDTVANFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR F I +LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCELMANNGKIVIVAALDGTFQRKPFTTISNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM CF++A+F+KR+G E + +
Sbjct: 136 AVCMKCFKEASFSKRLGSETAIEV 159
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/141 (55%), Positives = 100/141 (70%), Gaps = 3/141 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ +A L ++ + VIGI
Sbjct: 23 RRVRRYQIAQYKCITIKYSNDNRYGT-GLWTHDRNNFSATETTNLLTIVDTVANFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR F I +LIPL+E V KLTAVCM C
Sbjct: 82 DEGQFFPDIVEFCELMANNGKIVIVAALDGTFQRKPFTTISNLIPLSEMVVKLTAVCMKC 141
Query: 139 FRDAAFTKRIGQEK--EVILG 157
F++A+F+KR+G E EVI G
Sbjct: 142 FKEASFSKRLGSETAIEVIGG 162
>gi|9633697|ref|NP_051775.1| m61R [Myxoma virus]
gi|21759250|sp|Q9Q8N6.1|KITH_MYXVL RecName: Full=Thymidine kinase
gi|6523916|gb|AAF14949.1|AF170726_65 m61R [Myxoma virus]
gi|170664527|gb|ACB28684.1| m61R [Myxoma virus]
gi|170664699|gb|ACB28855.1| m61R [recombinant virus 6918VP60-T2]
gi|301134587|gb|ADK63701.1| m61R [Myxoma virus]
gi|408685227|gb|AFU77662.1| m61R [Myxoma virus]
gi|408685900|gb|AFU78331.1| m61R [Myxoma virus]
gi|408686234|gb|AFU78663.1| m61R [Myxoma virus]
Length = 178
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G + +I+GPMF+GK+TELIR ++RYQ A Y+C++V+Y KD RY V THD ++AV
Sbjct: 5 GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVKYEKDARYGN-GVRTHDNTCISAV 63
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L+ + ++ ++VIGIDEGQF
Sbjct: 64 PTASLDDVESISEHVEVIGIDEGQF----------------------------------- 88
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FP++VSF E MANAGK+++VAALDGTFQR F +I LIPLAE V KL
Sbjct: 89 -----------FPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLN 137
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM C++DA+F+KR+G E E+ I
Sbjct: 138 AVCMYCYKDASFSKRLGNETEIEI 161
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 104/140 (74%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y+C++V+Y KD RY V THD ++AV L+ + ++ ++VIGI
Sbjct: 25 RLVKRYQIARYKCLVVKYEKDARYGN-GVRTHDNTCISAVPTASLDDVESISEHVEVIGI 83
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFP++VSF E MANAGK+++VAALDGTFQR F +I LIPLAE V KL AVCM C
Sbjct: 84 DEGQFFPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLNAVCMYC 143
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
++DA+F+KR+G E E+ I+G
Sbjct: 144 YKDASFSKRLGNETEIEIIG 163
>gi|125455|sp|P28851.1|KITH_MYXVU RecName: Full=Thymidine kinase
gi|60616|emb|CAA36880.1| thymidine kinase [Myxoma virus]
gi|408684554|gb|AFU76993.1| m61R [Myxoma virus]
gi|408684722|gb|AFU77160.1| m61R [Myxoma virus]
gi|408684888|gb|AFU77325.1| m61R [Myxoma virus]
gi|408685057|gb|AFU77493.1| m61R [Myxoma virus]
gi|408685397|gb|AFU77831.1| m61R [Myxoma virus]
gi|408685562|gb|AFU77995.1| m61R [Myxoma virus]
gi|408685731|gb|AFU78163.1| m61R [Myxoma virus]
gi|408686065|gb|AFU78495.1| m61R [Myxoma virus]
gi|408686402|gb|AFU78830.1| m61R [Myxoma virus]
gi|408686570|gb|AFU78997.1| m61R [Myxoma virus]
gi|408686737|gb|AFU79163.1| m61R [Myxoma virus]
gi|408686905|gb|AFU79330.1| m61R [Myxoma virus]
gi|408687074|gb|AFU79498.1| m61R [Myxoma virus]
gi|408687409|gb|AFU79831.1| m61R [Myxoma virus]
gi|408687576|gb|AFU79997.1| m61R [Myxoma virus]
gi|408687744|gb|AFU80164.1| m61R [Myxoma virus]
gi|408687912|gb|AFU80331.1| m61R [Myxoma virus]
gi|408688080|gb|AFU80498.1| m61R [Myxoma virus]
gi|408688249|gb|AFU80666.1| m61R [Myxoma virus]
Length = 178
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 118/204 (57%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G + +I+GPMF+GK+TELIR ++RYQ A Y+C++V Y KD RY V THD ++AV
Sbjct: 5 GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVNYEKDARYGN-GVRTHDNTCISAV 63
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L+ + ++ ++VIGIDEGQF
Sbjct: 64 PTASLDDVESISEHVEVIGIDEGQF----------------------------------- 88
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FP++VSF E MANAGK+++VAALDGTFQR F +I LIPLAE V KL
Sbjct: 89 -----------FPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLN 137
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM C++DA+F+KR+G E E+ I
Sbjct: 138 AVCMYCYKDASFSKRLGNETEIEI 161
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 103/140 (73%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y+C++V Y KD RY V THD ++AV L+ + ++ ++VIGI
Sbjct: 25 RLVKRYQIARYKCLVVNYEKDARYGN-GVRTHDNTCISAVPTASLDDVESISEHVEVIGI 83
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFP++VSF E MANAGK+++VAALDGTFQR F +I LIPLAE V KL AVCM C
Sbjct: 84 DEGQFFPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLNAVCMYC 143
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
++DA+F+KR+G E E+ I+G
Sbjct: 144 YKDASFSKRLGNETEIEIIG 163
>gi|71024946|gb|AAZ17456.1| thymidine kinase [Skunkpox virus]
Length = 176
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 114/204 (55%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ Y+C+ ++Y D+RY T V THD+ +A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQITQYKCITIKYTNDNRYGT-GVWTHDRNNFSAI 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L ++ + VIGIDEGQF
Sbjct: 62 ETTNLLTIVDTVANFSVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPD+V F E MAN GKIV+VAALDGTFQR F I +LIPL+E V KLT
Sbjct: 87 -----------FPDIVEFCELMANNGKIVIVAALDGTFQRKPFTTISNLIPLSEMVVKLT 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
VCM CF++A+F+KR+G E ++ I
Sbjct: 136 PVCMKCFKEASFSKRLGIETKIEI 159
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ Y+C+ ++Y D+RY T V THD+ +A+ L ++ + VIGI
Sbjct: 23 RRVRRYQITQYKCITIKYTNDNRYGT-GVWTHDRNNFSAIETTNLLTIVDTVANFSVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR F I +LIPL+E V KLT VCM C
Sbjct: 82 DEGQFFPDIVEFCELMANNGKIVIVAALDGTFQRKPFTTISNLIPLSEMVVKLTPVCMKC 141
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
F++A+F+KR+G E ++ I+G
Sbjct: 142 FKEASFSKRLGIETKIEIIG 161
>gi|55274605|gb|AAV49156.1| thymidine kinase [Goatpox virus]
gi|55274607|gb|AAV49157.1| thymidine kinase [Goatpox virus]
gi|62530406|gb|AAX85429.1| thymidine kinase [Goatpox virus]
gi|73427762|gb|AAZ76364.1| thymidine kinase [Goatpox virus]
Length = 177
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 115/200 (57%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I+GPMFSGK+TELIR ++RYQ A Y+C +V+Y D RY V THD ++A+S
Sbjct: 7 HLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLNDIRYGNS-VYTHDNNHVSAMSTTL 65
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ + D+IGIDEGQF
Sbjct: 66 LYDVVDKIMNFDIIGIDEGQF--------------------------------------- 86
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F+E+MAN GKI+++AALD TFQR FNDIL LIPL+E V KL AVCM
Sbjct: 87 -------FKDIVPFSENMANMGKIIIIAALDSTFQRKEFNDILKLIPLSEKVTKLNAVCM 139
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C++DAAF+KRI +EKE+ +
Sbjct: 140 ECYKDAAFSKRITKEKEIEL 159
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 100/138 (72%), Gaps = 1/138 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y+C +V+Y D RY V THD ++A+S L ++ + D+IGI
Sbjct: 23 RIVKRYQIAQYKCCVVKYLNDIRYGNS-VYTHDNNHVSAMSTTLLYDVVDKIMNFDIIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+V F+E+MAN GKI+++AALD TFQR FNDIL LIPL+E V KL AVCM C
Sbjct: 82 DEGQFFKDIVPFSENMANMGKIIIIAALDSTFQRKEFNDILKLIPLSEKVTKLNAVCMEC 141
Query: 139 FRDAAFTKRIGQEKEVIL 156
++DAAF+KRI +EKE+ L
Sbjct: 142 YKDAAFSKRITKEKEIEL 159
>gi|408687241|gb|AFU79664.1| m61R [Myxoma virus]
Length = 181
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 118/204 (57%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G + +I+GPMF+GK+TELIR ++RYQ A Y+C++V Y KD RY V THD ++AV
Sbjct: 5 GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVNYEKDARYGN-GVRTHDNTCISAV 63
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L+ + ++ ++VIGIDEGQF
Sbjct: 64 PTASLDDVESISEHVEVIGIDEGQF----------------------------------- 88
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FP++VSF E MANAGK+++VAALDGTFQR F +I LIPLAE V KL
Sbjct: 89 -----------FPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLN 137
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM C++DA+F+KR+G E E+ I
Sbjct: 138 AVCMYCYKDASFSKRLGNETEIEI 161
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 103/140 (73%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y+C++V Y KD RY V THD ++AV L+ + ++ ++VIGI
Sbjct: 25 RLVKRYQIARYKCLVVNYEKDARYGN-GVRTHDNTCISAVPTASLDDVESISEHVEVIGI 83
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFP++VSF E MANAGK+++VAALDGTFQR F +I LIPLAE V KL AVCM C
Sbjct: 84 DEGQFFPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLNAVCMYC 143
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
++DA+F+KR+G E E+ I+G
Sbjct: 144 YKDASFSKRLGNETEIEIIG 163
>gi|148912943|ref|YP_001293257.1| hypothetical protein GTPV_gp062 [Goatpox virus Pellor]
Length = 177
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 114/200 (57%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I+GPMFSGK+TELIR ++RYQ A Y+C +V+Y D RY V THD ++A+S
Sbjct: 7 HLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLNDIRYGNS-VYTHDNNHVSAMSTTL 65
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ D+IGIDEGQF
Sbjct: 66 LYDVVDKIMKFDIIGIDEGQF--------------------------------------- 86
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F+E+MAN GKI+++AALD TFQR FNDIL LIPL+E V KL AVCM
Sbjct: 87 -------FKDIVPFSENMANMGKIIIIAALDSTFQRKEFNDILKLIPLSEKVTKLNAVCM 139
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C++DAAF+KRI +EKE+ +
Sbjct: 140 ECYKDAAFSKRITKEKEIEL 159
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y+C +V+Y D RY V THD ++A+S L ++ D+IGI
Sbjct: 23 RIVKRYQIAQYKCCVVKYLNDIRYGNS-VYTHDNNHVSAMSTTLLYDVVDKIMKFDIIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+V F+E+MAN GKI+++AALD TFQR FNDIL LIPL+E V KL AVCM C
Sbjct: 82 DEGQFFKDIVPFSENMANMGKIIIIAALDSTFQRKEFNDILKLIPLSEKVTKLNAVCMEC 141
Query: 139 FRDAAFTKRIGQEKEVIL 156
++DAAF+KRI +EKE+ L
Sbjct: 142 YKDAAFSKRITKEKEIEL 159
>gi|313215181|emb|CBY42860.1| unnamed protein product [Oikopleura dioica]
gi|313238594|emb|CBY13640.1| unnamed protein product [Oikopleura dioica]
Length = 214
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 116/202 (57%), Gaps = 48/202 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I GPMFSGK++EL+RRI RYQYAN RC+ V+YAKD RY ++THDQ+ + A+S +
Sbjct: 17 QLIFGPMFSGKSSELMRRIVRYQYANKRCLAVKYAKDTRYHDSAMATHDQRTIEALSVMN 76
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L L D +DVIGIDEGQF
Sbjct: 77 LGALRGDKLDEVDVIGIDEGQF-------------------------------------- 98
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+PD + FAE MA GKIV++AALDG ++R GFN I L+PLAE V KL AVC
Sbjct: 99 --------YPDCIQFAEDMARKGKIVIIAALDGDYRRQGFNKITDLVPLAESVIKLNAVC 150
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
M C DAAFTKRI ++ E R+E
Sbjct: 151 MICGDDAAFTKRI-EQNEHRLE 171
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 102/150 (68%), Gaps = 3/150 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRI RYQYAN RC+ V+YAKD RY +ATHDQ+ + A+S + L L D +DVIG
Sbjct: 33 RRIVRYQYANKRCLAVKYAKDTRYHDSAMATHDQRTIEALSVMNLGALRGDKLDEVDVIG 92
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQF+PD + FAE MA GKIV++AALDG ++R GFN I L+PLAE V KL AVCM
Sbjct: 93 IDEGQFYPDCIQFAEDMARKGKIVIIAALDGDYRRQGFNKITDLVPLAESVIKLNAVCMI 152
Query: 138 CFRDAAFTKRIGQEKEVILGPMFSGKTTEL 167
C DAAFTKRI Q + + + G T L
Sbjct: 153 CGDDAAFTKRIEQNEHRL--ELIGGADTYL 180
>gi|260817475|ref|XP_002603612.1| hypothetical protein BRAFLDRAFT_126922 [Branchiostoma floridae]
gi|229288932|gb|EEN59623.1| hypothetical protein BRAFLDRAFT_126922 [Branchiostoma floridae]
Length = 196
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 100/136 (73%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI+RY+ A C++++YA DDRYD + +ATHD+ AV+ +L + VIG+
Sbjct: 36 RRIQRYKIAKQSCVLIKYAGDDRYDKDGIATHDRYVTEAVATTKLYDIKDDVLSCQVIGV 95
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPDVV F + MAN GK V+VAALDGTFQ+ GF DIL+L+PLAE V KL AVCMSC
Sbjct: 96 DEGQFFPDVVPFCDEMANQGKTVIVAALDGTFQKKGFGDILNLVPLAESVIKLQAVCMSC 155
Query: 139 FRDAAFTKRIGQEKEV 154
+ A++TKR+GQE +V
Sbjct: 156 YNHASYTKRLGQETKV 171
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 112/201 (55%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKT-TELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV 211
+++ P G++ TEL+RRI+RY+ A C++++YA DDRYD + ++THD+ AV+
Sbjct: 19 DLVTKPPRKGRSRTELVRRIQRYKIAKQSCVLIKYAGDDRYDKDGIATHDRYVTEAVATT 78
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L + VIG+DEGQF
Sbjct: 79 KLYDIKDDVLSCQVIGVDEGQF-------------------------------------- 100
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPDVV F + MAN GK V+VAALDGTFQ+ GF DIL+L+PLAE V KL AVC
Sbjct: 101 --------FPDVVPFCDEMANQGKTVIVAALDGTFQKKGFGDILNLVPLAESVIKLQAVC 152
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
MSC+ A++TKR+GQE +V +
Sbjct: 153 MSCYNHASYTKRLGQETKVEV 173
>gi|198423054|ref|XP_002127533.1| PREDICTED: similar to thymidine kinase 1, soluble [Ciona
intestinalis]
Length = 222
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 118/203 (58%), Gaps = 53/203 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RRIRRYQ +C++++YA D+RY + ++THD+Q AV A
Sbjct: 21 QVILGPMFSGKSTELLRRIRRYQITERKCLVIKYAHDNRYSDDSMATHDKQITKAVKATH 80
Query: 213 LNKLIPHTKDID---VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L L K++D VIG+DEGQF
Sbjct: 81 LLAL----KNLDSFSVIGVDEGQF------------------------------------ 100
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
FPD+V F +SM+++GK V+VAALDGTF+R F +L LIP+AE V KL+A
Sbjct: 101 ----------FPDIVQFCDSMSSSGKTVIVAALDGTFERKPFGAVLGLIPIAETVVKLSA 150
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
VC SC R+AAFTKR+G E V +
Sbjct: 151 VCNSCHREAAFTKRLGLETAVEV 173
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/144 (55%), Positives = 104/144 (72%), Gaps = 9/144 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDID---V 75
RRIRRYQ +C++++YA D+RY + +ATHD+Q AV A L L K++D V
Sbjct: 37 RRIRRYQITERKCLVIKYAHDNRYSDDSMATHDKQITKAVKATHLLAL----KNLDSFSV 92
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IG+DEGQFFPD+V F +SM+++GK V+VAALDGTF+R F +L LIP+AE V KL+AVC
Sbjct: 93 IGVDEGQFFPDIVQFCDSMSSSGKTVIVAALDGTFERKPFGAVLGLIPIAETVVKLSAVC 152
Query: 136 MSCFRDAAFTKRIGQEK--EVILG 157
SC R+AAFTKR+G E EVI G
Sbjct: 153 NSCHREAAFTKRLGLETAVEVIGG 176
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 13/49 (26%)
Query: 234 VEVIGGSDKYMAVCRECYK-------------QKAPIKRSPFKTLANEN 269
VEVIGG+DKYMA CR C+ +K R P L NEN
Sbjct: 171 VEVIGGTDKYMAACRSCFSLSPCKQLKFQSKDEKVNRVRIPLGVLTNEN 219
>gi|18640149|ref|NP_570223.1| SPV063 thymidine kinase [Swinepox virus]
gi|335134|gb|AAA47894.1| thymidine kinase [Swinepox virus]
gi|18448556|gb|AAL69802.1| SPV063 thymidine kinase [Swinepox virus]
Length = 181
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 115/200 (57%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+ILGPMFSGK+TELIR + RYQ A Y C +++Y+KD+RY + V THD+ ++AVS
Sbjct: 11 HLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVSTDS 70
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + D+D++GIDEGQF
Sbjct: 71 LFDIKDTLDDVDIVGIDEGQF--------------------------------------- 91
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F E +AN GKIV+VAALDGT++R F +IL+LIPL+E V KL A+CM
Sbjct: 92 -------FNDIVEFCEYIANKGKIVIVAALDGTYERKPFGNILNLIPLSEKVTKLNAICM 144
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C RDA+F+KR+ EKE+ +
Sbjct: 145 ICHRDASFSKRLSDEKEIEL 164
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 100/138 (72%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R + RYQ A Y C +++Y+KD+RY + V THD+ ++AVS L + D+D++GI
Sbjct: 27 RLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVSTDSLFDIKDTLDDVDIVGI 86
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+V F E +AN GKIV+VAALDGT++R F +IL+LIPL+E V KL A+CM C
Sbjct: 87 DEGQFFNDIVEFCEYIANKGKIVIVAALDGTYERKPFGNILNLIPLSEKVTKLNAICMIC 146
Query: 139 FRDAAFTKRIGQEKEVIL 156
RDA+F+KR+ EKE+ L
Sbjct: 147 HRDASFSKRLSDEKEIEL 164
>gi|221126198|ref|XP_002157900.1| PREDICTED: thymidine kinase, cytosolic-like [Hydra magnipapillata]
Length = 237
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 118/214 (55%), Gaps = 46/214 (21%)
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS 198
+R ++ + ++I GPMFSGKTTEL+RRI RY +A Y+C++++Y KD RY VS
Sbjct: 9 YRQHSYPHVNNGQIQLIFGPMFSGKTTELLRRITRYSFARYKCLLIKYEKDIRYSNNGVS 68
Query: 199 THDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIK 258
THDQ+ AV+ L + TK+ DVIG+DEGQF
Sbjct: 69 THDQRVHEAVACTVLRDVKHLTKEFDVIGVDEGQF------------------------- 103
Query: 259 RSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLI 318
+PDVV F E MA K V+VAALDG FQR F +++ L+
Sbjct: 104 ---------------------YPDVVQFCEEMAGMKKTVIVAALDGDFQRKPFGNVIDLV 142
Query: 319 PLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
PLAE V KL+AVCM C+ +A+FTKR+G + +V I
Sbjct: 143 PLAESVIKLSAVCMCCYGEASFTKRLGSDTKVEI 176
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 100/140 (71%), Gaps = 1/140 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI RY +A Y+C++++Y KD RY V+THDQ+ AV+ L + TK+ DVIG+
Sbjct: 39 RRITRYSFARYKCLLIKYEKDIRYSNNGVSTHDQRVHEAVACTVLRDVKHLTKEFDVIGV 98
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQF+PDVV F E MA K V+VAALDG FQR F +++ L+PLAE V KL+AVCM C
Sbjct: 99 DEGQFYPDVVQFCEEMAGMKKTVIVAALDGDFQRKPFGNVIDLVPLAESVIKLSAVCMCC 158
Query: 139 FRDAAFTKRIGQEKEV-ILG 157
+ +A+FTKR+G + +V I+G
Sbjct: 159 YGEASFTKRLGSDTKVEIIG 178
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPI 257
VE+IGG+DKYMA CR C+K++ +
Sbjct: 174 VEIIGGADKYMAACRGCHKKQIDV 197
>gi|125459|sp|P23335.1|KITH_SWPVK RecName: Full=Thymidine kinase
gi|335130|gb|AAA47891.1| thymidine kinase [Swinepox virus]
Length = 177
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 115/200 (57%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+ILGPMFSGK+TELIR + RYQ A Y C +++Y+KD+RY + V THD+ ++AVS
Sbjct: 7 HLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVSTDS 66
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + D+D++GIDEGQF
Sbjct: 67 LFDIKDTLDDVDIVGIDEGQF--------------------------------------- 87
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F E +AN GKIV+VAALDGT++R F +IL+LIPL+E V KL A+CM
Sbjct: 88 -------FNDIVEFCEYIANKGKIVIVAALDGTYERKPFGNILNLIPLSEKVTKLNAICM 140
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C RDA+F+KR+ EKE+ +
Sbjct: 141 ICHRDASFSKRLSDEKEIEL 160
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 100/138 (72%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R + RYQ A Y C +++Y+KD+RY + V THD+ ++AVS L + D+D++GI
Sbjct: 23 RLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVSTDSLFDIKDTLDDVDIVGI 82
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+V F E +AN GKIV+VAALDGT++R F +IL+LIPL+E V KL A+CM C
Sbjct: 83 DEGQFFNDIVEFCEYIANKGKIVIVAALDGTYERKPFGNILNLIPLSEKVTKLNAICMIC 142
Query: 139 FRDAAFTKRIGQEKEVIL 156
RDA+F+KR+ EKE+ L
Sbjct: 143 HRDASFSKRLSDEKEIEL 160
>gi|281205299|gb|EFA79491.1| thymidine kinase [Polysphondylium pallidum PN500]
Length = 201
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 121/203 (59%), Gaps = 44/203 (21%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD---TEKVSTHDQQKLTAVS 209
+VI GPMFSGKTTELIRRI+R+ +AN +C++++Y+KD RY+ T+ + THD+Q TA+
Sbjct: 12 QVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDIRYNGAETDILYTHDKQNYTALP 71
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L ++ + DVIG+DEGQF+ VI
Sbjct: 72 CSRLEEVKQQALEYDVIGVDEGQFINVI-------------------------------- 99
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+FPD+VSF+E +AN GK V+VAALDGTFQR F L L+P AE + KL+A
Sbjct: 100 --------LKFPDIVSFSEDLANNGKTVIVAALDGTFQRKSF-PALELVPKAEEITKLSA 150
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
+CM C+RDA F+KRI +E+ +
Sbjct: 151 ICMVCYRDAPFSKRIVPNEEIEL 173
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 104/150 (69%), Gaps = 12/150 (8%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYD---TEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RRI+R+ +AN +C++++Y+KD RY+ T+ + THD+Q TA+ L ++ + DV
Sbjct: 28 RRIKRFNFANKKCLLIKYSKDIRYNGAETDILYTHDKQNYTALPCSRLEEVKQQALEYDV 87
Query: 76 IGIDEGQF------FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
IG+DEGQF FPD+VSF+E +AN GK V+VAALDGTFQR F L L+P AE +
Sbjct: 88 IGVDEGQFINVILKFPDIVSFSEDLANNGKTVIVAALDGTFQRKSF-PALELVPKAEEIT 146
Query: 130 KLTAVCMSCFRDAAFTKRI--GQEKEVILG 157
KL+A+CM C+RDA F+KRI +E E+I G
Sbjct: 147 KLSAICMVCYRDAPFSKRIVPNEEIELIGG 176
>gi|12085049|ref|NP_073451.1| 66R protein [Yaba-like disease virus]
gi|157939689|ref|YP_001497061.1| thymidine kinase [Tanapox virus]
gi|12056225|emb|CAC21304.1| 66R protein [Yaba-like disease virus]
gi|146746405|gb|ABQ43541.1| thymidine kinase [Tanapox virus]
gi|146746561|gb|ABQ43696.1| thymidine kinase [Tanapox virus]
Length = 183
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 112/200 (56%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++ILGPMFSGK+TELIR ++RYQ A Y C +++Y+KD RY V THD + A+
Sbjct: 9 QIILGPMFSGKSTELIRILKRYQIARYTCFVIKYSKDTRYGKGLV-THDNNSIPAIPVNS 67
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+++ DVIGIDEGQF
Sbjct: 68 LSEINCDKIKADVIGIDEGQF--------------------------------------- 88
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E MAN GKIV+VAALDGTF R F +IL LIP AE V KLTAVCM
Sbjct: 89 -------FPDIVEFCERMANDGKIVIVAALDGTFLREPFGNILKLIPCAEYVSKLTAVCM 141
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
+CF A+F+KRIG E+E+ +
Sbjct: 142 NCFNSASFSKRIGDEQEIEV 161
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 96/136 (70%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y C +++Y+KD RY + + THD + A+ L+++ DVIGI
Sbjct: 25 RILKRYQIARYTCFVIKYSKDTRYG-KGLVTHDNNSIPAIPVNSLSEINCDKIKADVIGI 83
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E MAN GKIV+VAALDGTF R F +IL LIP AE V KLTAVCM+C
Sbjct: 84 DEGQFFPDIVEFCERMANDGKIVIVAALDGTFLREPFGNILKLIPCAEYVSKLTAVCMNC 143
Query: 139 FRDAAFTKRIGQEKEV 154
F A+F+KRIG E+E+
Sbjct: 144 FNSASFSKRIGDEQEI 159
>gi|377830073|ref|YP_005296270.1| unnamed protein product [Cotia virus SPAn232]
gi|1060872|dbj|BAA08118.1| thymidine kinase [Cotia virus]
gi|302635715|gb|ADL60426.1| thymidine kinase [Cotia virus]
gi|377814316|gb|AFB76935.1| thymidine kinase [Cotia virus SPAn232]
Length = 178
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 117/200 (58%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++ILGPMFSGKTTEL+R ++RY+ ANY+C +++Y D+R D V THD + ++S ++
Sbjct: 6 KLILGPMFSGKTTELVRIVKRYKIANYKCCVIKYYNDNRCDESIVKTHDGVYIDSISTLK 65
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
LN +I ++DVIGIDEGQF
Sbjct: 66 LNDIIYEMDNVDVIGIDEGQF--------------------------------------- 86
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F+E+MAN GKIV+V+ALD T+QR F +IL+LIPL+E V KL A+C
Sbjct: 87 -------FNDIVEFSENMANKGKIVIVSALDATYQRKTFGNILNLIPLSEKVIKLNAICK 139
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CF DAAFTKR+ + ++ +
Sbjct: 140 ICFNDAAFTKRLCDDTKIEL 159
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 101/138 (73%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RY+ ANY+C +++Y D+R D V THD + ++S ++LN +I ++DVIGI
Sbjct: 22 RIVKRYKIANYKCCVIKYYNDNRCDESIVKTHDGVYIDSISTLKLNDIIYEMDNVDVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D+V F+E+MAN GKIV+V+ALD T+QR F +IL+LIPL+E V KL A+C C
Sbjct: 82 DEGQFFNDIVEFSENMANKGKIVIVSALDATYQRKTFGNILNLIPLSEKVIKLNAICKIC 141
Query: 139 FRDAAFTKRIGQEKEVIL 156
F DAAFTKR+ + ++ L
Sbjct: 142 FNDAAFTKRLCDDTKIEL 159
>gi|149054918|gb|EDM06735.1| rCG32815, isoform CRA_a [Rattus norvegicus]
Length = 241
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 106/185 (57%), Gaps = 47/185 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LKDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154
Query: 333 SCFRD 337
CFR+
Sbjct: 155 ECFRE 159
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLKDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM C
Sbjct: 97 DEGQFFPDIVDFCETMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156
Query: 139 FRD 141
FR+
Sbjct: 157 FRE 159
>gi|9633870|ref|NP_051950.1| gp061R [Rabbit fibroma virus]
gi|363548427|sp|P07605.2|KITH_RFVKA RecName: Full=Thymidine kinase
gi|6578589|gb|AAF17943.1|AF170722_61 gp061R [Rabbit fibroma virus]
Length = 178
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 117/204 (57%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G +I+GPMF+GK+TELIR +RRYQ A ++C++V+Y KD RY V THD +TAV
Sbjct: 5 GGHIHLIIGPMFAGKSTELIRLVRRYQIAKHKCLVVKYEKDIRYGN-GVCTHDNMSITAV 63
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L+K+ ++ +VIGIDEGQF
Sbjct: 64 CTPSLDKIDSVAENAEVIGIDEGQF----------------------------------- 88
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FP++ +F E MANAGK+++VAALDGTFQR F++I LIPLAE V KL
Sbjct: 89 -----------FPNIATFCERMANAGKVLIVAALDGTFQRKPFSNISELIPLAENVTKLN 137
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM C+++ +F+KR+G + E+ +
Sbjct: 138 AVCMYCYKNGSFSKRLGDKMEIEV 161
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/136 (52%), Positives = 100/136 (73%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R +RRYQ A ++C++V+Y KD RY V THD +TAV L+K+ ++ +VIGI
Sbjct: 25 RLVRRYQIAKHKCLVVKYEKDIRYGN-GVCTHDNMSITAVCTPSLDKIDSVAENAEVIGI 83
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFP++ +F E MANAGK+++VAALDGTFQR F++I LIPLAE V KL AVCM C
Sbjct: 84 DEGQFFPNIATFCERMANAGKVLIVAALDGTFQRKPFSNISELIPLAENVTKLNAVCMYC 143
Query: 139 FRDAAFTKRIGQEKEV 154
+++ +F+KR+G + E+
Sbjct: 144 YKNGSFSKRLGDKMEI 159
>gi|290973965|ref|XP_002669717.1| thymidine kinase [Naegleria gruberi]
gi|284083268|gb|EFC36973.1| thymidine kinase [Naegleria gruberi]
Length = 275
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/200 (42%), Positives = 110/200 (55%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I G MF+GKT+EL+RR+RRYQYA ++V+Y DDRY E VSTHD + A+
Sbjct: 66 QLIFGNMFAGKTSELLRRLRRYQYAQKETVLVKYINDDRYSKENVSTHDLVQQKAIPTDR 125
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L K+ VIGIDEGQF
Sbjct: 126 LEKIASQLLGYHVIGIDEGQF--------------------------------------- 146
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F E+ AN GKIV+V+ALDGTFQR F ++LSL+P+AE V KL AVCM
Sbjct: 147 -------FPDLVEFCEAAANGGKIVIVSALDGTFQRKQFGNVLSLVPMAESVVKLKAVCM 199
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C +DAAF+KRI E++ +
Sbjct: 200 VCGKDAAFSKRITDEQQTEV 219
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 98/141 (69%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQYA ++V+Y DDRY E V+THD + A+ L K+ VIGI
Sbjct: 82 RRLRRYQYAQKETVLVKYINDDRYSKENVSTHDLVQQKAIPTDRLEKIASQLLGYHVIGI 141
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F E+ AN GKIV+V+ALDGTFQR F ++LSL+P+AE V KL AVCM C
Sbjct: 142 DEGQFFPDLVEFCEAAANGGKIVIVSALDGTFQRKQFGNVLSLVPMAESVVKLKAVCMVC 201
Query: 139 FRDAAFTKRIG--QEKEVILG 157
+DAAF+KRI Q+ EVI G
Sbjct: 202 GKDAAFSKRITDEQQTEVIGG 222
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 228 IDEGQFVEVIGGSDKYMAVCRECY 251
I + Q EVIGGSDKY+A CR+CY
Sbjct: 211 ITDEQQTEVIGGSDKYIATCRKCY 234
>gi|38229228|ref|NP_938321.1| 66R [Yaba monkey tumor virus]
gi|11133048|sp|Q90033.1|KITH_YMTV5 RecName: Full=Thymidine kinase
gi|38000499|gb|AAR07422.1| 66R [Yaba monkey tumor virus]
Length = 181
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 114/200 (57%), Gaps = 47/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+ILGPMFSGK+TELIR ++RYQ A Y C++++Y+KD+RY V THD + A+
Sbjct: 9 HIILGPMFSGKSTELIRLLKRYQVAMYTCLVIKYSKDERYGRGLV-THDNDSVPAIPVNS 67
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
LN++ + + DVIGIDEGQF
Sbjct: 68 LNEINCNDINADVIGIDEGQF--------------------------------------- 88
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V F + MAN GKI++VAALDGTF R F +IL+LIP AE V KLTAVCM
Sbjct: 89 -------FPDIVEFCDYMANNGKILIVAALDGTFLRQPFGNILNLIPRAEYVLKLTAVCM 141
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CF A+F+KRI E+E+ I
Sbjct: 142 ICFGSASFSKRISDEQEIEI 161
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R ++RYQ A Y C++++Y+KD+RY + THD + A+ LN++ + + DVIGI
Sbjct: 25 RLLKRYQVAMYTCLVIKYSKDERYG-RGLVTHDNDSVPAIPVNSLNEINCNDINADVIGI 83
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V F + MAN GKI++VAALDGTF R F +IL+LIP AE V KLTAVCM C
Sbjct: 84 DEGQFFPDIVEFCDYMANNGKILIVAALDGTFLRQPFGNILNLIPRAEYVLKLTAVCMIC 143
Query: 139 FRDAAFTKRIGQEKEV 154
F A+F+KRI E+E+
Sbjct: 144 FGSASFSKRISDEQEI 159
>gi|313219539|emb|CBY30462.1| unnamed protein product [Oikopleura dioica]
gi|313226348|emb|CBY21492.1| unnamed protein product [Oikopleura dioica]
Length = 244
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I+GPMFSGK+TEL+RR+RR Q A ++C++V++ +DDRY ++THD QK+ A+ A +
Sbjct: 26 QLIIGPMFSGKSTELLRRLRRSQNACFKCLVVKFNEDDRYSDLDMATHDGQKVAAIKAAK 85
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+ + KD DVIG+DEGQF
Sbjct: 86 LDDVYDAAKDFDVIGVDEGQF--------------------------------------- 106
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D++ F E++AN+GK V+VAALDG ++R F + LIPL+E V KLTA+CM
Sbjct: 107 -------FEDLLEFCENLANSGKTVIVAALDGDYKRQPFEKTIQLIPLSESVTKLTAICM 159
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
+C DAAF++R+G + + ++
Sbjct: 160 NCRADAAFSRRLGAQTQQKV 179
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/140 (50%), Positives = 104/140 (74%), Gaps = 1/140 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q A ++C++V++ +DDRY +ATHD QK+ A+ A +L+ + KD DVIG+
Sbjct: 42 RRLRRSQNACFKCLVVKFNEDDRYSDLDMATHDGQKVAAIKAAKLDDVYDAAKDFDVIGV 101
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D++ F E++AN+GK V+VAALDG ++R F + LIPL+E V KLTA+CM+C
Sbjct: 102 DEGQFFEDLLEFCENLANSGKTVIVAALDGDYKRQPFEKTIQLIPLSESVTKLTAICMNC 161
Query: 139 FRDAAFTKRIG-QEKEVILG 157
DAAF++R+G Q ++ ++G
Sbjct: 162 RADAAFSRRLGAQTQQKVIG 181
>gi|333616|gb|AAA47227.1| thymidine kinase (EC 2.1.7.21) [Rabbit fibroma virus]
Length = 176
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 47/204 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G +I+GPMF+GK+TELIR +RRYQ A ++C++V+Y KD RY V THD +TAV
Sbjct: 3 GGHIHLIIGPMFAGKSTELIRLVRRYQIAKHKCLVVKYEKDIRYGN-GVCTHDNMSITAV 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L+K+ ++ +VIGIDEGQF
Sbjct: 62 CTPSLDKIDSVAENAEVIGIDEGQF----------------------------------- 86
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FP++ +F E MAN GK+++VAALDGTFQR F++I LIPLAE V KL
Sbjct: 87 -----------FPNIATFCERMANRGKVLIVAALDGTFQRKPFSNISELIPLAENVTKLN 135
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM C+++ +F+KR+G + E+ +
Sbjct: 136 AVCMYCYKNGSFSKRLGDKMEIEV 159
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 99/136 (72%), Gaps = 1/136 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R +RRYQ A ++C++V+Y KD RY V THD +TAV L+K+ ++ +VIGI
Sbjct: 23 RLVRRYQIAKHKCLVVKYEKDIRYGN-GVCTHDNMSITAVCTPSLDKIDSVAENAEVIGI 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFP++ +F E MAN GK+++VAALDGTFQR F++I LIPLAE V KL AVCM C
Sbjct: 82 DEGQFFPNIATFCERMANRGKVLIVAALDGTFQRKPFSNISELIPLAENVTKLNAVCMYC 141
Query: 139 FRDAAFTKRIGQEKEV 154
+++ +F+KR+G + E+
Sbjct: 142 YKNGSFSKRLGDKMEI 157
>gi|225711222|gb|ACO11457.1| Thymidine kinase [Caligus rogercresseyi]
Length = 185
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 92/128 (71%)
Query: 27 ANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFFPD 86
A ++C+IV+Y+KDDRYD +ATHD+ + AVS + L +D VIGIDEGQFFPD
Sbjct: 31 AKFKCLIVKYSKDDRYDENGIATHDRTTMDAVSCLTPESLAEKAEDFHVIGIDEGQFFPD 90
Query: 87 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
+V FAE MA+ KIV++AALD TFQR GF IL LIPLAE V K +VCM CF++ +F K
Sbjct: 91 IVPFAERMASQNKIVIIAALDSTFQRKGFPHILELIPLAERVTKFNSVCMKCFKEGSFNK 150
Query: 147 RIGQEKEV 154
RI QE E+
Sbjct: 151 RITQEMEL 158
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 114/200 (57%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I+GPMFSGK+TELIRR+RR A ++C+IV+Y+KDDRYD ++THD+ + AVS +
Sbjct: 7 QLIIGPMFSGKSTELIRRLRRLLCAKFKCLIVKYSKDDRYDENGIATHDRTTMDAVSCLT 66
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L +D VIGIDEGQF
Sbjct: 67 PESLAEKAEDFHVIGIDEGQF--------------------------------------- 87
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V FAE MA+ KIV++AALD TFQR GF IL LIPLAE V K +VCM
Sbjct: 88 -------FPDIVPFAERMASQNKIVIIAALDSTFQRKGFPHILELIPLAERVTKFNSVCM 140
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
CF++ +F KRI QE E+ +
Sbjct: 141 KCFKEGSFNKRITQEMELEV 160
>gi|66805237|ref|XP_636351.1| thymidine kinase [Dictyostelium discoideum AX4]
gi|74967354|sp|Q27564.1|KITH_DICDI RecName: Full=Thymidine kinase 1; Short=TK1; AltName:
Full=Calmodulin-binding protein ThyB
gi|21239412|gb|AAM44288.1|AF510846_1 calmodulin-binding protein ThyB [Dictyostelium discoideum]
gi|1408308|gb|AAB03673.1| ThyB [Dictyostelium discoideum]
gi|37780193|gb|AAO64434.1| thymidine kinase 1 [Dictyostelium discoideum]
gi|60464697|gb|EAL62823.1| thymidine kinase [Dictyostelium discoideum AX4]
Length = 227
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 50/210 (23%)
Query: 147 RIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY----DTEKVSTHDQ 202
+I + +VI GPMFSGKTTELIRRI+R+ +AN +C++++Y+KD RY D + THD+
Sbjct: 5 QIAGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDK 64
Query: 203 QKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPF 262
Q A L + ++ DVIGIDEGQF
Sbjct: 65 QNYQAFPCSILEDVKEQAQNYDVIGIDEGQF----------------------------- 95
Query: 263 KTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
FPDVV F+E +AN GK V++AALDGTFQR F ++ L+ AE
Sbjct: 96 -----------------FPDVVQFSEDLANQGKTVIIAALDGTFQRKPFQSVIDLVSKAE 138
Query: 323 CVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
+ KLTAVCM C+ +AAF+KRI + ++ +
Sbjct: 139 YITKLTAVCMVCYNEAAFSKRIVESDDIEL 168
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 97/142 (68%), Gaps = 4/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY----DTEKVATHDQQKLTAVSAVELNKLIPHTKDID 74
RRI+R+ +AN +C++++Y+KD RY D + THD+Q A L + ++ D
Sbjct: 27 RRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDKQNYQAFPCSILEDVKEQAQNYD 86
Query: 75 VIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
VIGIDEGQFFPDVV F+E +AN GK V++AALDGTFQR F ++ L+ AE + KLTAV
Sbjct: 87 VIGIDEGQFFPDVVQFSEDLANQGKTVIIAALDGTFQRKPFQSVIDLVSKAEYITKLTAV 146
Query: 135 CMSCFRDAAFTKRIGQEKEVIL 156
CM C+ +AAF+KRI + ++ L
Sbjct: 147 CMVCYNEAAFSKRIVESDDIEL 168
>gi|440799111|gb|ELR20172.1| thymidine kinase [Acanthamoeba castellanii str. Neff]
Length = 252
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 108/203 (53%), Gaps = 49/203 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL---TAVS 209
EVILGPMFSGK+TELIRRIRR+ A RC +++YA D RY E ++THD+ + S
Sbjct: 12 EVILGPMFSGKSTELIRRIRRHTIAKQRCFVIKYAADSRYSKENMATHDRYLIPHKNKPS 71
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L ++ D IGIDEGQF
Sbjct: 72 IRNLREVKQEAALFDCIGIDEGQF------------------------------------ 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
F D+V F E MA+ GKIV+VAALDGTFQR F +L LIPLAE V KL+A
Sbjct: 96 ----------FCDIVPFCELMASLGKIVIVAALDGTFQRKPFGTVLELIPLAESVSKLSA 145
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
VCM C DA+FT+R+G E V +
Sbjct: 146 VCMCCSNDASFTQRLGSETAVEV 168
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 94/144 (65%), Gaps = 5/144 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL---TAVSAVELNKLIPHTKDIDV 75
RRIRR+ A RC +++YA D RY E +ATHD+ + S L ++ D
Sbjct: 28 RRIRRHTIAKQRCFVIKYAADSRYSKENMATHDRYLIPHKNKPSIRNLREVKQEAALFDC 87
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IGIDEGQFF D+V F E MA+ GKIV+VAALDGTFQR F +L LIPLAE V KL+AVC
Sbjct: 88 IGIDEGQFFCDIVPFCELMASLGKIVIVAALDGTFQRKPFGTVLELIPLAESVSKLSAVC 147
Query: 136 MSCFRDAAFTKRIGQEK--EVILG 157
M C DA+FT+R+G E EVI G
Sbjct: 148 MCCSNDASFTQRLGSETAVEVIGG 171
>gi|330804641|ref|XP_003290301.1| calmodulin-binding protein ThyB [Dictyostelium purpureum]
gi|325079588|gb|EGC33181.1| calmodulin-binding protein ThyB [Dictyostelium purpureum]
Length = 234
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 110/204 (53%), Gaps = 50/204 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY----DTEKVSTHDQQKLTAV 208
+VI GPMFSGKTTELIRRI+R+ +AN +C++++Y+KD RY D + THD+Q A
Sbjct: 12 QVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDKQNYQAF 71
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L + + DVIGIDEGQF
Sbjct: 72 PCSILEDIREQAEKYDVIGIDEGQF----------------------------------- 96
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
FPDVV F+E +AN GK V++AALDGTFQR F ++ L+ AE + KLT
Sbjct: 97 -----------FPDVVQFSEELANQGKTVIIAALDGTFQRKPFASVIDLVSKAEVITKLT 145
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
AVCM C+ DAAF+KRI + + +
Sbjct: 146 AVCMVCYNDAAFSKRIVDDDNIEL 169
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/198 (42%), Positives = 113/198 (57%), Gaps = 21/198 (10%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY----DTEKVATHDQQKLTAVSAVELNKLIPHTKDID 74
RRI+R+ +AN +C++++Y+KD RY D + THD+Q A L + + D
Sbjct: 28 RRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDKQNYQAFPCSILEDIREQAEKYD 87
Query: 75 VIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
VIGIDEGQFFPDVV F+E +AN GK V++AALDGTFQR F ++ L+ AE + KLTAV
Sbjct: 88 VIGIDEGQFFPDVVQFSEELANQGKTVIIAALDGTFQRKPFASVIDLVSKAEVITKLTAV 147
Query: 135 CMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDT 194
CM C+ DAAF+KRI + + ELI I +Y C Y KD T
Sbjct: 148 CMVCYNDAAFSKRIVDDDNI-----------ELIGGIDKYISVCRGC----YHKDTSMKT 192
Query: 195 EKV--STHDQQKLTAVSA 210
K + HD+ AV A
Sbjct: 193 LKSVRNVHDKALSGAVVA 210
>gi|328874302|gb|EGG22668.1| thymidine kinase [Dictyostelium fasciculatum]
Length = 213
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 109/203 (53%), Gaps = 49/203 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY---DTEKVSTHDQQKLTAVS 209
+VI GPMFSGKTTELIRRI+R+ N +C++++Y+KD RY D + THD+Q A
Sbjct: 13 QVIYGPMFSGKTTELIRRIKRFNLTNQKCLLIKYSKDTRYNEIDRSLLYTHDKQNYQAFP 72
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L + D DVIGIDEGQF
Sbjct: 73 CSVLEEAKDKALDYDVIGIDEGQF------------------------------------ 96
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
F D+V F+E +AN GK V+VAALDGTFQR F +L L+P AE + KLTA
Sbjct: 97 ----------FQDIVPFSEDLANRGKTVIVAALDGTFQRKPFGTVLELVPKAESITKLTA 146
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
VCM CF+DA FTKRI ++ V +
Sbjct: 147 VCMQCFKDAPFTKRIVPDETVEL 169
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY---DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RRI+R+ N +C++++Y+KD RY D + THD+Q A L + D DV
Sbjct: 29 RRIKRFNLTNQKCLLIKYSKDTRYNEIDRSLLYTHDKQNYQAFPCSVLEEAKDKALDYDV 88
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IGIDEGQFF D+V F+E +AN GK V+VAALDGTFQR F +L L+P AE + KLTAVC
Sbjct: 89 IGIDEGQFFQDIVPFSEDLANRGKTVIVAALDGTFQRKPFGTVLELVPKAESITKLTAVC 148
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
M CF+DA FTKRI ++ V L
Sbjct: 149 MQCFKDAPFTKRIVPDETVEL 169
>gi|123975356|ref|XP_001314157.1| thymidine kinase family protein [Trichomonas vaginalis G3]
gi|121896311|gb|EAY01466.1| thymidine kinase family protein [Trichomonas vaginalis G3]
Length = 346
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 159/356 (44%), Gaps = 88/356 (24%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI R + A+ RC + +Y+ D RY +KV+THD A+S L DVIGI
Sbjct: 24 RRISRCEMAHKRCRVYKYSFDQRYSADKVSTHDYFMHDAISCTTLMPHFMEAMSYDVIGI 83
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFFPD+V FA+ +ANAGKIV ++ALDG + R F + LI E V KLTA+C
Sbjct: 84 DEGQFFPDIVVFADQLANAGKIVFISALDGDYLRKPFGKVGELISKCESVIKLTAICRVT 143
Query: 139 FRDAAFTKRI----------GQEK------------------EVILGPMFSGKTTELIRR 170
+AAFT+R G E + +GP+ SGKTTEL R
Sbjct: 144 GEEAAFTERTVKSDQLELIGGAESYTSSSRTAWKKFNTSGCINLTIGPVKSGKTTELTRL 203
Query: 171 IRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL--IPHTKDIDVIGI 228
+ R++ A + +++ + DT KV V +N L + ++ DVIG+
Sbjct: 204 LVRHKIAGKKVIML---VNHEVDTTKV---------PVEVRVINALPDLASMQEYDVIGV 251
Query: 229 DEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAE 288
D+G E + +A+
Sbjct: 252 DDGHLYE----------------------------------------------GIAEWAD 265
Query: 289 SMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
A+ K V+VAA DG R ++ IL L AE V K+ ++CM A FT RI
Sbjct: 266 DFADHNKKVMVAAADGDEFRNPYSHILKLFSFAESVRKIDSICMVTGNPAPFTARI 321
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 99/200 (49%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPMF+GKTTE++RRI R + A+ RC + +Y+ D RY +KVSTHD A+S
Sbjct: 8 ELIFGPMFAGKTTEMLRRISRCEMAHKRCRVYKYSFDQRYSADKVSTHDYFMHDAISCTT 67
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L DVIGIDEGQF
Sbjct: 68 LMPHFMEAMSYDVIGIDEGQF--------------------------------------- 88
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPD+V FA+ +ANAGKIV ++ALDG + R F + LI E V KLTA+C
Sbjct: 89 -------FPDIVVFADQLANAGKIVFISALDGDYLRKPFGKVGELISKCESVIKLTAICR 141
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
+AAFT+R + ++ +
Sbjct: 142 VTGEEAAFTERTVKSDQLEL 161
>gi|242023692|ref|XP_002432265.1| Thymidine kinase, cytosolic, putative [Pediculus humanus corporis]
gi|212517674|gb|EEB19527.1| Thymidine kinase, cytosolic, putative [Pediculus humanus corporis]
Length = 198
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 104/200 (52%), Gaps = 62/200 (31%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKTTELIRRIRRYQ A ++C++ +YA D+RY V+THD A+S
Sbjct: 21 EVIFGPMFSGKTTELIRRIRRYQLARFKCLVFKYAGDNRYSKNDVATHDCNTFAAISCTL 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L EGQF
Sbjct: 81 L----------------EGQF--------------------------------------- 85
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D++ F+ES+AN GKIV++AALDGT+QRT F DIL L+PL+E + KL A+CM
Sbjct: 86 -------FSDLIPFSESLANVGKIVIIAALDGTYQRTAFGDILKLVPLSENIIKLNAICM 138
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C+ A FTKRI EK V +
Sbjct: 139 VCYNTAGFTKRITNEKAVEL 158
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 89/138 (64%), Gaps = 16/138 (11%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRIRRYQ A ++C++ +YA D+RY VATHD A+S L
Sbjct: 37 RRIRRYQLARFKCLVFKYAGDNRYSKNDVATHDCNTFAAISCTLL--------------- 81
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
EGQFF D++ F+ES+AN GKIV++AALDGT+QRT F DIL L+PL+E + KL A+CM C
Sbjct: 82 -EGQFFSDLIPFSESLANVGKIVIIAALDGTYQRTAFGDILKLVPLSENIIKLNAICMVC 140
Query: 139 FRDAAFTKRIGQEKEVIL 156
+ A FTKRI EK V L
Sbjct: 141 YNTAGFTKRITNEKAVEL 158
>gi|167524627|ref|XP_001746649.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774919|gb|EDQ88545.1| predicted protein [Monosiga brevicollis MX1]
Length = 1562
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 94/131 (71%)
Query: 24 YQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQF 83
Y A R M+++YAKD RY + V THD Q+ TA + L ++ D DVIGIDEGQF
Sbjct: 1366 YAVAQQRTMLIKYAKDTRYGIDGVITHDHQRSTAKACSSLAEVEDSAMDYDVIGIDEGQF 1425
Query: 84 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAA 143
FPD+V+F E AN GK V+VAALDGTFQR F +++ LIPL+E V+KL AVC+ CF+DA+
Sbjct: 1426 FPDLVNFCEEAANQGKTVIVAALDGTFQRKPFPNVMELIPLSEAVDKLQAVCVRCFKDAS 1485
Query: 144 FTKRIGQEKEV 154
F+KR+G E +V
Sbjct: 1486 FSKRLGTETQV 1496
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 95/179 (53%), Gaps = 46/179 (25%)
Query: 174 YQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQF 233
Y A R M+++YAKD RY + V THD Q+ TA + L ++ D DVIGIDEGQF
Sbjct: 1366 YAVAQQRTMLIKYAKDTRYGIDGVITHDHQRSTAKACSSLAEVEDSAMDYDVIGIDEGQF 1425
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANA 293
FPD+V+F E AN
Sbjct: 1426 ----------------------------------------------FPDLVNFCEEAANQ 1439
Query: 294 GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
GK V+VAALDGTFQR F +++ LIPL+E V+KL AVC+ CF+DA+F+KR+G E +V +
Sbjct: 1440 GKTVIVAALDGTFQRKPFPNVMELIPLSEAVDKLQAVCVRCFKDASFSKRLGTETQVEV 1498
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 25/43 (58%), Gaps = 10/43 (23%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPP 276
VEVIGGSDKY+AVCRECY FKT A + PP
Sbjct: 1496 VEVIGGSDKYVAVCRECY----------FKTDPQTPTAPSSPP 1528
>gi|145493834|ref|XP_001432912.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400027|emb|CAK65515.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 116/201 (57%), Gaps = 48/201 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK-VSTHDQQKLTAVSAVE 212
VI GPMFSGKT+EL+R ++R+ + +C+++ YA D+RY E+ +S+HD+Q L A+ +
Sbjct: 8 VIYGPMFSGKTSELMRLVKRFTISERKCVVLNYANDNRYSGEQCISSHDKQFLRAIKVCK 67
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
LN+ K+ DV+ IDEGQF
Sbjct: 68 LNEAYEKCKESDVVAIDEGQF--------------------------------------- 88
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F+E MAN GKIV+VAALDGTF R F++IL+LIPLAE + KLTAVC
Sbjct: 89 -------FQDIVEFSEKMANLGKIVIVAALDGTFDRKPFHNILNLIPLAERITKLTAVCW 141
Query: 333 SCFR-DAAFTKRIGQEKEVRI 352
C R +A+FTKRI Q KE+ +
Sbjct: 142 FCKRENASFTKRIVQSKEIEL 162
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 102/140 (72%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEK-VATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R ++R+ + +C+++ YA D+RY E+ +++HD+Q L A+ +LN+ K+ DV+
Sbjct: 23 RLVKRFTISERKCVVLNYANDNRYSGEQCISSHDKQFLRAIKVCKLNEAYEKCKESDVVA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V F+E MAN GKIV+VAALDGTF R F++IL+LIPLAE + KLTAVC
Sbjct: 83 IDEGQFFQDIVEFSEKMANLGKIVIVAALDGTFDRKPFHNILNLIPLAERITKLTAVCWF 142
Query: 138 CFR-DAAFTKRIGQEKEVIL 156
C R +A+FTKRI Q KE+ L
Sbjct: 143 CKRENASFTKRIVQSKEIEL 162
>gi|145477083|ref|XP_001424564.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391629|emb|CAK57166.1| unnamed protein product [Paramecium tetraurelia]
Length = 202
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 116/201 (57%), Gaps = 48/201 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK-VSTHDQQKLTAVSAVE 212
VI GPMFSGKT+EL+R ++R+ + +C+++ YA D+RY E+ +S+HD+Q L A+ +
Sbjct: 8 VIYGPMFSGKTSELMRLVKRFTISERKCVVLNYANDNRYSEEQCISSHDKQFLKAIKVCK 67
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
LN+ K+ DV+ IDEGQF
Sbjct: 68 LNEAYEKCKESDVVAIDEGQF--------------------------------------- 88
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F+E MAN GKIV+VAALDGTF R F++IL+LIPLAE + KLTAVC
Sbjct: 89 -------FTDIVEFSEKMANLGKIVIVAALDGTFDRKPFHNILNLIPLAERITKLTAVCW 141
Query: 333 SCFR-DAAFTKRIGQEKEVRI 352
C + +A+FTKRI Q +E+ +
Sbjct: 142 FCKKENASFTKRIVQSQEIEL 162
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 102/140 (72%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEK-VATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R ++R+ + +C+++ YA D+RY E+ +++HD+Q L A+ +LN+ K+ DV+
Sbjct: 23 RLVKRFTISERKCVVLNYANDNRYSEEQCISSHDKQFLKAIKVCKLNEAYEKCKESDVVA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V F+E MAN GKIV+VAALDGTF R F++IL+LIPLAE + KLTAVC
Sbjct: 83 IDEGQFFTDIVEFSEKMANLGKIVIVAALDGTFDRKPFHNILNLIPLAERITKLTAVCWF 142
Query: 138 CFR-DAAFTKRIGQEKEVIL 156
C + +A+FTKRI Q +E+ L
Sbjct: 143 CKKENASFTKRIVQSQEIEL 162
>gi|301121262|ref|XP_002908358.1| thymidine kinase [Phytophthora infestans T30-4]
gi|262103389|gb|EEY61441.1| thymidine kinase [Phytophthora infestans T30-4]
Length = 174
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 115/206 (55%), Gaps = 46/206 (22%)
Query: 147 RIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLT 206
+I ++I+GPMFSGK+TELIRRI RYQ+A C++V+Y D R+ E +STHD+ +
Sbjct: 4 KIEGSLQLIIGPMFSGKSTELIRRIHRYQHAKLDCLVVKYLFDTRHSEEMLSTHDKVFVE 63
Query: 207 AVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
A+ L ++ P K+ DVIGIDEGQF
Sbjct: 64 AMPVQALAEVRPFLKEYDVIGIDEGQF--------------------------------- 90
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+PD+V F + AN GK+VVVAALD TF+R F++++ LIP AE V K
Sbjct: 91 -------------YPDLVEFCQEAANLGKVVVVAALDATFERKAFDNVIELIPTAEKVIK 137
Query: 327 LTAVCMSCFRDAAFTKRIGQEKEVRI 352
L A+C SC +DAAFT+R+ +K + +
Sbjct: 138 LNAICSSCGQDAAFTRRLVADKTLEV 163
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 95/134 (70%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI RYQ+A C++V+Y D R+ E ++THD+ + A+ L ++ P K+ DVIGI
Sbjct: 26 RRIHRYQHAKLDCLVVKYLFDTRHSEEMLSTHDKVFVEAMPVQALAEVRPFLKEYDVIGI 85
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQF+PD+V F + AN GK+VVVAALD TF+R F++++ LIP AE V KL A+C SC
Sbjct: 86 DEGQFYPDLVEFCQEAANLGKVVVVAALDATFERKAFDNVIELIPTAEKVIKLNAICSSC 145
Query: 139 FRDAAFTKRIGQEK 152
+DAAFT+R+ +K
Sbjct: 146 GQDAAFTRRLVADK 159
>gi|403367952|gb|EJY83804.1| Thymidine kinase [Oxytricha trifallax]
Length = 252
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I+GPMF+GK+TEL+RR++R++ A +C+ +++A D RY + ++THD+Q A+SA
Sbjct: 38 ELIIGPMFAGKSTELLRRVKRHEIAGSKCLRIKFAGDTRYSDDSIATHDRQTQKAISASV 97
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+ + K DVIGIDEGQF
Sbjct: 98 LSTIGEMWKQYDVIGIDEGQF--------------------------------------- 118
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
FPDV+ FAE +N GK+V+++ALDGTF RTGF +IL+LIP AE V+KL A+C
Sbjct: 119 -------FPDVIEFAEKTSNDGKVVIISALDGTFLRTGFENILNLIPKAEKVKKLAAICK 171
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C ++A FT R E+ +++
Sbjct: 172 ICNQNAYFTFRTILEETIQL 191
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 98/142 (69%)
Query: 15 VHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDID 74
RR++R++ A +C+ +++A D RY + +ATHD+Q A+SA L+ + K D
Sbjct: 50 TELLRRVKRHEIAGSKCLRIKFAGDTRYSDDSIATHDRQTQKAISASVLSTIGEMWKQYD 109
Query: 75 VIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
VIGIDEGQFFPDV+ FAE +N GK+V+++ALDGTF RTGF +IL+LIP AE V+KL A+
Sbjct: 110 VIGIDEGQFFPDVIEFAEKTSNDGKVVIISALDGTFLRTGFENILNLIPKAEKVKKLAAI 169
Query: 135 CMSCFRDAAFTKRIGQEKEVIL 156
C C ++A FT R E+ + L
Sbjct: 170 CKICNQNAYFTFRTILEETIQL 191
>gi|384249603|gb|EIE23084.1| TK-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 245
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/202 (43%), Positives = 113/202 (55%), Gaps = 50/202 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRY-QYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSA 210
++ILGPMF+GKT+ELIRR RR+ QY +C++V Y D+R ++ V THDQ + A S
Sbjct: 26 QLILGPMFAGKTSELIRRTRRFGQYK--KCLLVAYKGDNRCGSDASVVTHDQTGMKAKSV 83
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+++ +VIG+DEGQF
Sbjct: 84 EKLSQVENAAHCYNVIGVDEGQF------------------------------------- 106
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
FPDVV +AE AN GKIV++AALDGTFQR FN IL LIPLAE V KL AV
Sbjct: 107 ---------FPDVVEYAERWANEGKIVIIAALDGTFQRQPFNSILELIPLAEEVLKLRAV 157
Query: 331 CMSCFRDAAFTKRIGQEKEVRI 352
C C R+AAFT R+G E+EV +
Sbjct: 158 CSGCHREAAFTHRLGNEQEVEV 179
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 96/138 (69%), Gaps = 4/138 (2%)
Query: 19 RRIRRY-QYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR RR+ QY +C++V Y D+R ++ V THDQ + A S +L+++ +VI
Sbjct: 42 RRTRRFGQYK--KCLLVAYKGDNRCGSDASVVTHDQTGMKAKSVEKLSQVENAAHCYNVI 99
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
G+DEGQFFPDVV +AE AN GKIV++AALDGTFQR FN IL LIPLAE V KL AVC
Sbjct: 100 GVDEGQFFPDVVEYAERWANEGKIVIIAALDGTFQRQPFNSILELIPLAEEVLKLRAVCS 159
Query: 137 SCFRDAAFTKRIGQEKEV 154
C R+AAFT R+G E+EV
Sbjct: 160 GCHREAAFTHRLGNEQEV 177
>gi|308799447|ref|XP_003074504.1| G Chain G, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
pdb|1W4R| (ISS) [Ostreococcus tauri]
gi|116000675|emb|CAL50355.1| G Chain G, Structure Of A Type Ii Thymidine Kinase With Bound Dttp
pdb|1W4R| (ISS), partial [Ostreococcus tauri]
Length = 314
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 105/205 (51%), Gaps = 51/205 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD-----TEKVSTHDQQKLTA 207
EVI GPMFSGK+TEL RR+RR+ AN R ++V+YA D+RYD T THD + A
Sbjct: 10 EVIFGPMFSGKSTELQRRLRRHNVANRRVLVVKYAGDNRYDGAVGSTTSAVTHDLATMPA 69
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+ A +L + + + DVIGIDEGQF
Sbjct: 70 LPAKDLKNIDNVSHNYDVIGIDEGQF---------------------------------- 95
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F DV + E A AGK V+VAALD TFQR FN +L L+PLAE V KL
Sbjct: 96 ------------FDDVAHYCEKWAQAGKTVIVAALDATFQRKPFNSVLQLVPLAESVTKL 143
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TAVC C DAAFT R +E V +
Sbjct: 144 TAVCTDCAADAAFTARTTKETAVEV 168
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYD-----TEKVATHDQQKLTAVSAVELNKLIPHTKDI 73
RR+RR+ AN R ++V+YA D+RYD T THD + A+ A +L + + +
Sbjct: 26 RRLRRHNVANRRVLVVKYAGDNRYDGAVGSTTSAVTHDLATMPALPAKDLKNIDNVSHNY 85
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
DVIGIDEGQFF DV + E A AGK V+VAALD TFQR FN +L L+PLAE V KLTA
Sbjct: 86 DVIGIDEGQFFDDVAHYCEKWAQAGKTVIVAALDATFQRKPFNSVLQLVPLAESVTKLTA 145
Query: 134 VCMSCFRDAAFTKRIGQEK--EVILG 157
VC C DAAFT R +E EVI G
Sbjct: 146 VCTDCAADAAFTARTTKETAVEVIGG 171
>gi|255088409|ref|XP_002506127.1| thymidine kinase [Micromonas sp. RCC299]
gi|226521398|gb|ACO67385.1| thymidine kinase [Micromonas sp. RCC299]
Length = 388
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 108/214 (50%), Gaps = 62/214 (28%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK---------------- 196
+VI GPMFSGK+TEL RRIRR++ AN +C++V+YA D RY+ E
Sbjct: 25 QVIFGPMFSGKSTELARRIRRHKVANRQCIVVKYAGDTRYEDEPGRAEAGTADAANLRGC 84
Query: 197 VSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAP 256
V THD+Q L A A L + DV+GIDEGQF
Sbjct: 85 VVTHDRQALVAYPARALEDVDNVVHAFDVVGIDEGQF----------------------- 121
Query: 257 IKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILS 316
F D+V F E A GK V+VAALD TFQR FND+LS
Sbjct: 122 -----------------------FGDLVEFCERWARMGKTVIVAALDATFQRKPFNDVLS 158
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 350
L+P+AE V KL+AVC +C DA+FTKR+G E
Sbjct: 159 LVPIAEDVTKLSAVCNACGCDASFTKRVGSSDET 192
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 95/157 (60%), Gaps = 16/157 (10%)
Query: 15 VHFCRRIRRYQYANYRCMIVRYAKDDRYDTEK----------------VATHDQQKLTAV 58
RRIRR++ AN +C++V+YA D RY+ E V THD+Q L A
Sbjct: 37 TELARRIRRHKVANRQCIVVKYAGDTRYEDEPGRAEAGTADAANLRGCVVTHDRQALVAY 96
Query: 59 SAVELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDI 118
A L + DV+GIDEGQFF D+V F E A GK V+VAALD TFQR FND+
Sbjct: 97 PARALEDVDNVVHAFDVVGIDEGQFFGDLVEFCERWARMGKTVIVAALDATFQRKPFNDV 156
Query: 119 LSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVI 155
LSL+P+AE V KL+AVC +C DA+FTKR+G E +
Sbjct: 157 LSLVPIAEDVTKLSAVCNACGCDASFTKRVGSSDETV 193
>gi|145498198|ref|XP_001435087.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402216|emb|CAK67690.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 112/201 (55%), Gaps = 48/201 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAVE 212
VI GPMFSGKT+EL+R ++R+ + +C ++ YA D+RY D + +S+HD+Q L A+ +
Sbjct: 8 VIYGPMFSGKTSELMRLVKRFTISERKCAVLNYANDNRYSDDQCISSHDKQYLKAIKVTK 67
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L KD DV+ IDEGQF
Sbjct: 68 LFDAFEKCKDYDVVAIDEGQF--------------------------------------- 88
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F+E+MAN GKIV+VAALDGTF R F +ILSLIPLAE + KLTAVC
Sbjct: 89 -------FCDIVEFSEAMANLGKIVIVAALDGTFDRKPFRNILSLIPLAERITKLTAVCW 141
Query: 333 SCFR-DAAFTKRIGQEKEVRI 352
C + +A+FTKR Q +E+ +
Sbjct: 142 FCKKENASFTKRTVQSQEIEL 162
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 98/140 (70%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R ++R+ + +C ++ YA D+RY D + +++HD+Q L A+ +L KD DV+
Sbjct: 23 RLVKRFTISERKCAVLNYANDNRYSDDQCISSHDKQYLKAIKVTKLFDAFEKCKDYDVVA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V F+E+MAN GKIV+VAALDGTF R F +ILSLIPLAE + KLTAVC
Sbjct: 83 IDEGQFFCDIVEFSEAMANLGKIVIVAALDGTFDRKPFRNILSLIPLAERITKLTAVCWF 142
Query: 138 CFR-DAAFTKRIGQEKEVIL 156
C + +A+FTKR Q +E+ L
Sbjct: 143 CKKENASFTKRTVQSQEIEL 162
>gi|145501369|ref|XP_001436666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403808|emb|CAK69269.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 113/201 (56%), Gaps = 48/201 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAVE 212
VI GPMFSGKT+EL+R ++R+ + +C+++ YA D+RY D + +S+HD+Q L A+ +
Sbjct: 8 VIYGPMFSGKTSELMRLVKRFTISERKCVVLNYANDNRYSDDQCISSHDKQYLKAIKVTK 67
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L KD DV+ IDEGQF
Sbjct: 68 LFDAFEKCKDHDVVAIDEGQF--------------------------------------- 88
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+V F+E+MAN GKIV+VAALDGTF R F +ILSLIPLAE + KLTAVC
Sbjct: 89 -------FCDIVEFSEAMANLGKIVIVAALDGTFDRKPFRNILSLIPLAERITKLTAVCW 141
Query: 333 SCFR-DAAFTKRIGQEKEVRI 352
C + +A+FTKR Q +E+ +
Sbjct: 142 FCKKENASFTKRTVQSQEIEL 162
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R ++R+ + +C+++ YA D+RY D + +++HD+Q L A+ +L KD DV+
Sbjct: 23 RLVKRFTISERKCVVLNYANDNRYSDDQCISSHDKQYLKAIKVTKLFDAFEKCKDHDVVA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V F+E+MAN GKIV+VAALDGTF R F +ILSLIPLAE + KLTAVC
Sbjct: 83 IDEGQFFCDIVEFSEAMANLGKIVIVAALDGTFDRKPFRNILSLIPLAERITKLTAVCWF 142
Query: 138 CFR-DAAFTKRIGQEKEVIL 156
C + +A+FTKR Q +E+ L
Sbjct: 143 CKKENASFTKRTVQSQEIEL 162
>gi|348681114|gb|EGZ20930.1| hypothetical protein PHYSODRAFT_354343 [Phytophthora sojae]
Length = 181
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 112/207 (54%), Gaps = 46/207 (22%)
Query: 146 KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
K+I ++I+GPMFSGK+TELIRRI RYQ+ C++V+Y D R+ E +STHD+ +
Sbjct: 3 KKIEGCLQLIIGPMFSGKSTELIRRIHRYQHTKLECLVVKYLFDTRHSEELLSTHDKVFV 62
Query: 206 TAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
A+ L ++ P DVIGIDEGQF
Sbjct: 63 EAMPVQTLAEVRPFLDQFDVIGIDEGQF-------------------------------- 90
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
+PD+V F + AN GK+VVVAALD TF+R F++++ LIP AE V
Sbjct: 91 --------------YPDLVDFCQDAANRGKVVVVAALDATFERKAFDNVVELIPTAEQVI 136
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KL A+C SC DAAFT+R+ +K + +
Sbjct: 137 KLNAICSSCGHDAAFTRRLVADKTLEL 163
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 100/164 (60%), Gaps = 11/164 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI RYQ+ C++V+Y D R+ E ++THD+ + A+ L ++ P DVIGI
Sbjct: 26 RRIHRYQHTKLECLVVKYLFDTRHSEELLSTHDKVFVEAMPVQTLAEVRPFLDQFDVIGI 85
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQF+PD+V F + AN GK+VVVAALD TF+R F++++ LIP AE V KL A+C SC
Sbjct: 86 DEGQFYPDLVDFCQDAANRGKVVVVAALDATFERKAFDNVVELIPTAEQVIKLNAICSSC 145
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCM 182
DAAFT+R + + KT ELI I YQ +C
Sbjct: 146 GHDAAFTRR-----------LVADKTLELIGGIELYQPRCRQCF 178
>gi|145340984|ref|XP_001415596.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575819|gb|ABO93888.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 179
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 105/205 (51%), Gaps = 51/205 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD-----TEKVSTHDQQKLTA 207
EVI GPMFSGK+TEL RR+RR+ A+ R ++V+YA D+RYD T THD + A
Sbjct: 4 EVIFGPMFSGKSTELQRRLRRHTMASRRVLVVKYAGDNRYDDAVGTTTAAVTHDLATMPA 63
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+ +L + + DVIGIDEGQF
Sbjct: 64 LPTKDLRNIDNVAHNYDVIGIDEGQF---------------------------------- 89
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F DV +F E A+AGK V+VAALD TFQR FN +L L+PLAE V KL
Sbjct: 90 ------------FDDVAAFCEKWAHAGKTVIVAALDATFQRKPFNSVLQLVPLAENVTKL 137
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TAVC C DAAFT R +E V +
Sbjct: 138 TAVCTDCAADAAFTARTTKETSVEL 162
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 91/143 (63%), Gaps = 5/143 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYD-----TEKVATHDQQKLTAVSAVELNKLIPHTKDI 73
RR+RR+ A+ R ++V+YA D+RYD T THD + A+ +L + +
Sbjct: 20 RRLRRHTMASRRVLVVKYAGDNRYDDAVGTTTAAVTHDLATMPALPTKDLRNIDNVAHNY 79
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
DVIGIDEGQFF DV +F E A+AGK V+VAALD TFQR FN +L L+PLAE V KLTA
Sbjct: 80 DVIGIDEGQFFDDVAAFCEKWAHAGKTVIVAALDATFQRKPFNSVLQLVPLAENVTKLTA 139
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
VC C DAAFT R +E V L
Sbjct: 140 VCTDCAADAAFTARTTKETSVEL 162
>gi|9634756|ref|NP_039049.1| Thymidine kinase [Fowlpox virus]
gi|125432|sp|P10052.1|KITH_FOWPN RecName: Full=Thymidine kinase
gi|7271584|gb|AAF44430.1|AF198100_77 ORF FPV086 Thymidine kinase [Fowlpox virus]
gi|15011520|gb|AAK77606.1|AF396867_1 thymidine kinase [Fowlpox virus]
gi|61234|emb|CAA37041.1| unnamed protein product [Fowlpox virus]
gi|221413|dbj|BAA00233.1| thymidine kinase [Fowlpox virus]
gi|325381|gb|AAA43822.1| thymidine kinase [Fowlpox virus]
gi|3123532|emb|CAA11295.1| TK [Fowlpox virus]
gi|41023374|emb|CAE52628.1| thymidine kinase J2R homologue [Fowlpox virus isolate
HP-438/Munich]
Length = 183
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 112/203 (55%), Gaps = 51/203 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY---DTEKVSTHDQQKLTAVS 209
VI GPMFSGKT+EL+RRI+R+ +N++C+I+++ D+RY D KV THD + A +
Sbjct: 7 HVITGPMFSGKTSELVRRIKRFMLSNFKCIIIKHCGDNRYNEDDINKVYTHDLLFMEATA 66
Query: 210 AVELNKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+ L+ L+P + + VIGIDE QF
Sbjct: 67 SSNLSVLVPTLLNDGVQVIGIDEAQF---------------------------------- 92
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+V F+ESMAN GK V+VAAL+G F+R F ++ L+ LAE V L
Sbjct: 93 ------------FLDIVEFSESMANLGKTVIVAALNGDFKRELFGNVYKLLSLAETVSSL 140
Query: 328 TAVCMSCFRDAAFTKRIGQEKEV 350
TA+C+ C+ DA+F+KR+ + KEV
Sbjct: 141 TAICVKCYCDASFSKRVTENKEV 163
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 99/142 (69%), Gaps = 5/142 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY---DTEKVATHDQQKLTAVSAVELNKLIPHTKD--I 73
RRI+R+ +N++C+I+++ D+RY D KV THD + A ++ L+ L+P + +
Sbjct: 23 RRIKRFMLSNFKCIIIKHCGDNRYNEDDINKVYTHDLLFMEATASSNLSVLVPTLLNDGV 82
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D+V F+ESMAN GK V+VAAL+G F+R F ++ L+ LAE V LTA
Sbjct: 83 QVIGIDEAQFFLDIVEFSESMANLGKTVIVAALNGDFKRELFGNVYKLLSLAETVSSLTA 142
Query: 134 VCMSCFRDAAFTKRIGQEKEVI 155
+C+ C+ DA+F+KR+ + KEV+
Sbjct: 143 ICVKCYCDASFSKRVTENKEVM 164
>gi|167388362|ref|XP_001738537.1| thymidine kinase, cytosolic [Entamoeba dispar SAW760]
gi|165898206|gb|EDR25139.1| thymidine kinase, cytosolic, putative [Entamoeba dispar SAW760]
Length = 229
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 114/201 (56%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAV 211
++I+GPMFSGKTTELIR IRR++Y+ ++++Y+KD RY +E + +HD++ A+ A+
Sbjct: 27 QLIIGPMFSGKTTELIRLIRRFKYSKKTTVVIKYSKDTRYGSEDETMSHDKESWKAIPAM 86
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L L+ +VIGIDEGQF
Sbjct: 87 RLMPLLETALGYEVIGIDEGQF-------------------------------------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD++ F+E+ A+ G+ V++AALDGTFQR F I +LIPL E V+KL+A+C
Sbjct: 109 --------FPDLIEFSETCASYGRSVIIAALDGTFQRKPFGQITNLIPLCENVKKLSAIC 160
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
++C + AAF+ RI E+ + +
Sbjct: 161 VNCGKKAAFSLRISTEESIEV 181
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 100/142 (70%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R IRR++Y+ ++++Y+KD RY +E + +HD++ A+ A+ L L+ +VIG
Sbjct: 43 RLIRRFKYSKKTTVVIKYSKDTRYGSEDETMSHDKESWKAIPAMRLMPLLETALGYEVIG 102
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFFPD++ F+E+ A+ G+ V++AALDGTFQR F I +LIPL E V+KL+A+C++
Sbjct: 103 IDEGQFFPDLIEFSETCASYGRSVIIAALDGTFQRKPFGQITNLIPLCENVKKLSAICVN 162
Query: 138 CFRDAAFTKRIGQEK--EVILG 157
C + AAF+ RI E+ EVI G
Sbjct: 163 CGKKAAFSLRISTEESIEVIGG 184
>gi|303274903|ref|XP_003056762.1| thymidine kinase [Micromonas pusilla CCMP1545]
gi|226461114|gb|EEH58407.1| thymidine kinase [Micromonas pusilla CCMP1545]
Length = 472
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 103/208 (49%), Gaps = 62/208 (29%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS--------------- 198
+ GPMFSGK+TEL RRIRR++ AN C++V+YAKD RY++E +
Sbjct: 107 ITTGPMFSGKSTELARRIRRHKVANRSCLVVKYAKDTRYESEPGTAEAGTDGVDDLRGCM 166
Query: 199 -THDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPI 257
THD+Q L A L + DVIG+DEGQF
Sbjct: 167 ITHDRQALVAYPTHLLADVDNVAHSFDVIGVDEGQF------------------------ 202
Query: 258 KRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSL 317
FPDVV+F E AN GK V+VAALDG F+RT F +L L
Sbjct: 203 ----------------------FPDVVAFCEKWANEGKTVIVAALDGDFKRTPFGAVLGL 240
Query: 318 IPLAECVEKLTAVCMSCFRDAAFTKRIG 345
+P+AE V KL+AVC C DAAFT R G
Sbjct: 241 VPIAEDVTKLSAVCHGCGGDAAFTARAG 268
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 96/163 (58%), Gaps = 20/163 (12%)
Query: 15 VHFCRRIRRYQYANYRCMIVRYAKDDRYDTEK----------------VATHDQQKLTAV 58
RRIRR++ AN C++V+YAKD RY++E + THD+Q L A
Sbjct: 118 TELARRIRRHKVANRSCLVVKYAKDTRYESEPGTAEAGTDGVDDLRGCMITHDRQALVAY 177
Query: 59 SAVELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDI 118
L + DVIG+DEGQFFPDVV+F E AN GK V+VAALDG F+RT F +
Sbjct: 178 PTHLLADVDNVAHSFDVIGVDEGQFFPDVVAFCEKWANEGKTVIVAALDGDFKRTPFGAV 237
Query: 119 LSLIPLAECVEKLTAVCMSCFRDAAFTKRIG----QEKEVILG 157
L L+P+AE V KL+AVC C DAAFT R G E E+I G
Sbjct: 238 LGLVPIAEDVTKLSAVCHGCGGDAAFTARAGAVATDEVELIGG 280
>gi|4808438|dbj|BAA77559.1| thymidine kinase [Canarypox virus]
gi|4808444|dbj|BAA77564.1| thymidine kinase [Canarypox virus]
Length = 179
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 111/205 (54%), Gaps = 49/205 (23%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY---DTEKVSTHDQQKLTA 207
E +I+GPMFSGKTTEL+R IRR+ + +C+I+++ D RY D E + THD+ + A
Sbjct: 5 EIRLIIGPMFSGKTTELVRLIRRFMISGRKCIIIKHCSDSRYTEGDLEAIYTHDKISMEA 64
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+S +L LIP + +VIGIDEGQF
Sbjct: 65 LSCSKLLPLIPKIDNFEVIGIDEGQF---------------------------------- 90
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+V F+E MAN GK V++AAL+G F+R F +I L+ L+E V L
Sbjct: 91 ------------FEDIVEFSEIMANKGKTVIIAALNGDFKRQLFGNIFKLLSLSESVTSL 138
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TA+C C +A+F+KR+ +K+V++
Sbjct: 139 TAICAVCKNEASFSKRMTDDKDVKV 163
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY---DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
R IRR+ + +C+I+++ D RY D E + THD+ + A+S +L LIP + +V
Sbjct: 23 RLIRRFMISGRKCIIIKHCSDSRYTEGDLEAIYTHDKISMEALSCSKLLPLIPKIDNFEV 82
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IGIDEGQFF D+V F+E MAN GK V++AAL+G F+R F +I L+ L+E V LTA+C
Sbjct: 83 IGIDEGQFFEDIVEFSEIMANKGKTVIIAALNGDFKRQLFGNIFKLLSLSESVTSLTAIC 142
Query: 136 MSCFRDAAFTKRIGQEKEV 154
C +A+F+KR+ +K+V
Sbjct: 143 AVCKNEASFSKRMTDDKDV 161
>gi|67481149|ref|XP_655924.1| thymidine kinase [Entamoeba histolytica HM-1:IMSS]
gi|44804740|gb|AAS47703.1| thymidine kinase [Entamoeba histolytica]
gi|56473092|gb|EAL50538.1| thymidine kinase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707171|gb|EMD46875.1| thymidine kinase, putative [Entamoeba histolytica KU27]
Length = 218
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 114/201 (56%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAV 211
++I+GPMFSGKTTELIR I+R++Y+ ++++Y+KD RY +E + +HD++ A+ +
Sbjct: 27 QLIIGPMFSGKTTELIRLIKRFRYSKKTTVVIKYSKDTRYGSEDEAISHDKESWKAIPTM 86
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L ++ + +VIGIDEGQF
Sbjct: 87 KLMPVLETALNYEVIGIDEGQF-------------------------------------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD++ F+E+ A+ G++V++AALDGTFQR F I LIPL E V+KL+AVC
Sbjct: 109 --------FPDLIEFSEACASYGRLVIIAALDGTFQRKPFGQITDLIPLCESVKKLSAVC 160
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
++C + AAF+ R E+ + +
Sbjct: 161 VNCGKKAAFSLRTSSEESIEV 181
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 100/142 (70%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVA-THDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R I+R++Y+ ++++Y+KD RY +E A +HD++ A+ ++L ++ + +VIG
Sbjct: 43 RLIKRFRYSKKTTVVIKYSKDTRYGSEDEAISHDKESWKAIPTMKLMPVLETALNYEVIG 102
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFFPD++ F+E+ A+ G++V++AALDGTFQR F I LIPL E V+KL+AVC++
Sbjct: 103 IDEGQFFPDLIEFSEACASYGRLVIIAALDGTFQRKPFGQITDLIPLCESVKKLSAVCVN 162
Query: 138 CFRDAAFTKRIGQEK--EVILG 157
C + AAF+ R E+ EVI G
Sbjct: 163 CGKKAAFSLRTSSEESIEVIGG 184
>gi|340507228|gb|EGR33225.1| thymidine kinase, putative [Ichthyophthirius multifiliis]
Length = 195
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 105/200 (52%), Gaps = 47/200 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAVE 212
VI GPMFSGK+++L+ I+RYQY RC++ Y D+RY E +++TH+ Q A
Sbjct: 17 VIFGPMFSGKSSKLLEYIKRYQYKQQRCLVFNYVNDNRYSQEEQITTHNGQSFKAQKISN 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+ ++ +K+ DVI IDEGQF
Sbjct: 77 LSDVLNISKNYDVIAIDEGQF--------------------------------------- 97
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+ A+ +AN GKIV+VAALD +FQR FN+IL L+P+ E + KL AVC+
Sbjct: 98 -------FLDIADIADQLANQGKIVIVAALDASFQRKAFNNILDLVPICEEIIKLKAVCL 150
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C DA+++KR G K V +
Sbjct: 151 ICKEDASYSKRKGSSKRVEM 170
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Query: 21 IRRYQYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVIGID 79
I+RYQY RC++ Y D+RY E ++ TH+ Q A L+ ++ +K+ DVI ID
Sbjct: 34 IKRYQYKQQRCLVFNYVNDNRYSQEEQITTHNGQSFKAQKISNLSDVLNISKNYDVIAID 93
Query: 80 EGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 139
EGQFF D+ A+ +AN GKIV+VAALD +FQR FN+IL L+P+ E + KL AVC+ C
Sbjct: 94 EGQFFLDIADIADQLANQGKIVIVAALDASFQRKAFNNILDLVPICEEIIKLKAVCLICK 153
Query: 140 RDAAFTKRIGQEKEV 154
DA+++KR G K V
Sbjct: 154 EDASYSKRKGSSKRV 168
>gi|407041310|gb|EKE40657.1| thymidine kinase domain containing protein [Entamoeba nuttalli P19]
Length = 218
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 101/142 (71%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVA-THDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R I+R++Y+ ++++Y+KD RY +E A +HD++ A+ ++L L+ + +VIG
Sbjct: 43 RLIKRFRYSKKTTVVIKYSKDTRYGSEDEAISHDKESWKAIPTMKLMPLLETALNYEVIG 102
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFFPD++ F+E+ A+ G+ V++AALDGTFQR F I SLIPL E V+KL+AVC++
Sbjct: 103 IDEGQFFPDLIEFSEACASYGRSVIIAALDGTFQRKPFGQITSLIPLCESVKKLSAVCVN 162
Query: 138 CFRDAAFTKRIGQEK--EVILG 157
C + AAF+ RI E+ EVI G
Sbjct: 163 CGKKAAFSLRISSEESIEVIGG 184
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 111/201 (55%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAV 211
++I+GPMFSGKTTELIR I+R++Y+ ++++Y+KD RY +E + +HD++
Sbjct: 27 QLIIGPMFSGKTTELIRLIKRFRYSKKTTVVIKYSKDTRYGSEDEAISHDKESW------ 80
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
K IP K + ++ + EVIG I F
Sbjct: 81 ---KAIPTMKLMPLL--ETALNYEVIG------------------IDEGQF--------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD++ F+E+ A+ G+ V++AALDGTFQR F I SLIPL E V+KL+AVC
Sbjct: 109 --------FPDLIEFSEACASYGRSVIIAALDGTFQRKPFGQITSLIPLCESVKKLSAVC 160
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
++C + AAF+ RI E+ + +
Sbjct: 161 VNCGKKAAFSLRISSEESIEV 181
>gi|407838091|gb|EKF99933.1| thymidine kinase, putative [Trypanosoma cruzi]
Length = 313
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 110/199 (55%), Gaps = 49/199 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV- 211
E+I+GPMF+GKTTEL+RR+RR +A C ++++++D RY E VS+HD+ L A +AV
Sbjct: 55 ELIIGPMFAGKTTELMRRVRRELFAKRSCYVIKHSRDARYSRESVSSHDKLLLGATAAVA 114
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
EL ++ + DV+ +DEGQF
Sbjct: 115 ELREVGDAWRPFDVVAVDEGQF-------------------------------------- 136
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+V F + A+AGK V+V+ALDG ++R F+ I LIPLAE V+KLTAVC
Sbjct: 137 --------FPDIVGFCNTAADAGKTVIVSALDGDYRRQPFDGICRLIPLAESVKKLTAVC 188
Query: 332 MSCF-RDAAFTKR-IGQEK 348
M C R A+FT R + EK
Sbjct: 189 MECHCRSASFTYRTVSSEK 207
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV-ELNKLIPHTKDIDVIG 77
RR+RR +A C ++++++D RY E V++HD+ L A +AV EL ++ + DV+
Sbjct: 71 RRVRRELFAKRSCYVIKHSRDARYSRESVSSHDKLLLGATAAVAELREVGDAWRPFDVVA 130
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+DEGQFFPD+V F + A+AGK V+V+ALDG ++R F+ I LIPLAE V+KLTAVCM
Sbjct: 131 VDEGQFFPDIVGFCNTAADAGKTVIVSALDGDYRRQPFDGICRLIPLAESVKKLTAVCME 190
Query: 138 CF-RDAAFTKR-IGQEKEVILG 157
C R A+FT R + EK ++G
Sbjct: 191 CHCRSASFTYRTVSSEKRELIG 212
>gi|71667264|ref|XP_820583.1| thymidine kinase [Trypanosoma cruzi strain CL Brener]
gi|70885933|gb|EAN98732.1| thymidine kinase, putative [Trypanosoma cruzi]
Length = 355
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 110/199 (55%), Gaps = 49/199 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV- 211
E+I+GPMF+GKTTEL+RR+RR +A C ++++++D RY E VS+HD+ L A +AV
Sbjct: 97 ELIIGPMFAGKTTELMRRVRRELFAKRSCYVIKHSRDARYSRESVSSHDKLLLGATAAVA 156
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
EL ++ + DV+ +DEGQF
Sbjct: 157 ELREVGDAWRPFDVVAVDEGQF-------------------------------------- 178
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+V F + A+AGK V+V+ALDG ++R F+ I LIPLAE V+KLTAVC
Sbjct: 179 --------FPDIVGFCNTAADAGKTVIVSALDGDYRRQPFDGICRLIPLAESVKKLTAVC 230
Query: 332 MSCF-RDAAFTKR-IGQEK 348
M C R A+FT R + EK
Sbjct: 231 MECHCRSASFTYRTVSSEK 249
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV-ELNKLIPHTKDIDVIG 77
RR+RR +A C ++++++D RY E V++HD+ L A +AV EL ++ + DV+
Sbjct: 113 RRVRRELFAKRSCYVIKHSRDARYSRESVSSHDKLLLGATAAVAELREVGDAWRPFDVVA 172
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+DEGQFFPD+V F + A+AGK V+V+ALDG ++R F+ I LIPLAE V+KLTAVCM
Sbjct: 173 VDEGQFFPDIVGFCNTAADAGKTVIVSALDGDYRRQPFDGICRLIPLAESVKKLTAVCME 232
Query: 138 CF-RDAAFTKR-IGQEKEVILG 157
C R A+FT R + EK ++G
Sbjct: 233 CHCRSASFTYRTVSSEKRELIG 254
>gi|412993763|emb|CCO14274.1| thymidine kinase [Bathycoccus prasinos]
Length = 365
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 105/175 (60%), Gaps = 18/175 (10%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY----DTEKVATHDQQKLTAVSAVELNKLIPH-TKDI 73
RRIRR++ A ++++Y D RY + THD Q L A SA EL + + +
Sbjct: 44 RRIRRHKIAGRSVLLIKYKDDTRYAHICGSNANVTHDHQTLPAHSAKELMGNMDNIAHNY 103
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
DVIGIDEGQFF DVV+F + AN GK+V+ AALDGT++R FNDIL L+P+AE V+KLT+
Sbjct: 104 DVIGIDEGQFFGDVVAFCDRWANKGKVVICAALDGTYEREMFNDILKLVPMAESVDKLTS 163
Query: 134 VCMSCFRDAAFT-------KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRC 181
VC C +DA+FT K +EKE GP+ ELI Y+ A +C
Sbjct: 164 VCAMCSKDASFTLRCFDSSKNSSREKEEEDGPV------ELIGGAEMYKAACRKC 212
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 108/208 (51%), Gaps = 55/208 (26%)
Query: 141 DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY----DTEK 196
D F +I E+I GPMFSGK+TEL RRIRR++ A ++++Y D RY +
Sbjct: 20 DTNFNGKI----ELIFGPMFSGKSTELHRRIRRHKIAGRSVLLIKYKDDTRYAHICGSNA 75
Query: 197 VSTHDQQKLTAVSAVELNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKA 255
THD Q L A SA EL + + + DVIGIDEGQF
Sbjct: 76 NVTHDHQTLPAHSAKELMGNMDNIAHNYDVIGIDEGQF---------------------- 113
Query: 256 PIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDIL 315
F DVV+F + AN GK+V+ AALDGT++R FNDIL
Sbjct: 114 ------------------------FGDVVAFCDRWANKGKVVICAALDGTYEREMFNDIL 149
Query: 316 SLIPLAECVEKLTAVCMSCFRDAAFTKR 343
L+P+AE V+KLT+VC C +DA+FT R
Sbjct: 150 KLVPMAESVDKLTSVCAMCSKDASFTLR 177
>gi|428164318|gb|EKX33348.1| hypothetical protein GUITHDRAFT_158919 [Guillardia theta CCMP2712]
Length = 182
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 48/192 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY--DTEKVSTHDQQKLTAVSAV 211
+ILGPMF+GK+TEL+RR+RR++ AN +C+I++Y KD R+ +K++THD ++ AV
Sbjct: 1 MILGPMFAGKSTELMRRMRRHKLANLQCIIIKYEKDLRHGEGLDKLATHDNHRVAAVPCS 60
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L L +DVIGIDE QF
Sbjct: 61 RLYDLFKEASSMDVIGIDEAQF-------------------------------------- 82
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+PD+V+F E +A GKI++++ALDG F+R F + SL+P AE + KLTAVC
Sbjct: 83 --------YPDLVAFCEELAEMGKIIILSALDGDFRREPFGAVTSLVPKAESIIKLTAVC 134
Query: 332 MSCFRDAAFTKR 343
C ++A+FT+R
Sbjct: 135 KLCHQEASFTRR 146
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYD--TEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR+RR++ AN +C+I++Y KD R+ +K+ATHD ++ AV L L +DVI
Sbjct: 16 RRMRRHKLANLQCIIIKYEKDLRHGEGLDKLATHDNHRVAAVPCSRLYDLFKEASSMDVI 75
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
GIDE QF+PD+V+F E +A GKI++++ALDG F+R F + SL+P AE + KLTAVC
Sbjct: 76 GIDEAQFYPDLVAFCEELAEMGKIIILSALDGDFRREPFGAVTSLVPKAESIIKLTAVCK 135
Query: 137 SCFRDAAFTKR 147
C ++A+FT+R
Sbjct: 136 LCHQEASFTRR 146
>gi|407407001|gb|EKF31022.1| thymidine kinase, putative [Trypanosoma cruzi marinkellei]
Length = 270
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 109/199 (54%), Gaps = 49/199 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV- 211
E+I+GPMF+GKTTEL+RR+RR +A C ++++++D RY E VS+HD+ L A +AV
Sbjct: 12 ELIIGPMFAGKTTELMRRVRRELFAKRSCYVIKHSRDARYSRESVSSHDKLLLGATAAVA 71
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
EL ++ + DV+ +DEGQF
Sbjct: 72 ELREVGDAWRPYDVVAVDEGQF-------------------------------------- 93
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+V F + A+ GK V+V+ALDG ++R F+ I LIPLAE V+KLTAVC
Sbjct: 94 --------FPDIVEFCNTAADVGKTVIVSALDGDYRRQPFDGICRLIPLAESVKKLTAVC 145
Query: 332 MSCF-RDAAFTKR-IGQEK 348
M C R A+FT R + EK
Sbjct: 146 MECHCRSASFTYRTVSSEK 164
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 96/142 (67%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV-ELNKLIPHTKDIDVIG 77
RR+RR +A C ++++++D RY E V++HD+ L A +AV EL ++ + DV+
Sbjct: 28 RRVRRELFAKRSCYVIKHSRDARYSRESVSSHDKLLLGATAAVAELREVGDAWRPYDVVA 87
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+DEGQFFPD+V F + A+ GK V+V+ALDG ++R F+ I LIPLAE V+KLTAVCM
Sbjct: 88 VDEGQFFPDIVEFCNTAADVGKTVIVSALDGDYRRQPFDGICRLIPLAESVKKLTAVCME 147
Query: 138 CF-RDAAFTKR-IGQEKEVILG 157
C R A+FT R + EK ++G
Sbjct: 148 CHCRSASFTYRTVSSEKRELIG 169
>gi|4454101|emb|CAA77152.1| thymidine kinase [Cowpox virus]
Length = 113
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 7 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLYDVLESITDFSVIGI 65
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E
Sbjct: 66 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSE 113
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 86/160 (53%), Gaps = 47/160 (29%)
Query: 163 KTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKD 222
K+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D
Sbjct: 1 KSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLYDVLESITD 59
Query: 223 IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPD 282
VIGIDEGQF FPD
Sbjct: 60 FSVIGIDEGQF----------------------------------------------FPD 73
Query: 283 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E
Sbjct: 74 IVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSE 113
>gi|440300590|gb|ELP93037.1| thymidine kinase, cytosolic, putative [Entamoeba invadens IP1]
Length = 245
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 106/201 (52%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAV 211
++I+GPMFSGKTTELIR I+R+ + R +I++Y KD RY + + +HDQ+K A+ +
Sbjct: 27 QLIMGPMFSGKTTELIRLIKRFTVSKKRTVILKYTKDVRYGEVNEAVSHDQEKWEAIPTM 86
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
EL + DVIGIDEGQF
Sbjct: 87 ELMPCVKEALHYDVIGIDEGQF-------------------------------------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD++ F+E MA+ GK V++AALDGTFQR F I ++PL E V KL AVC
Sbjct: 109 --------FPDLLEFSELMADYGKRVIIAALDGTFQRKVFGQITDIVPLCESVRKLRAVC 160
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
+ C A+F+ R +E+ V +
Sbjct: 161 VFCGNKASFSMRTTEEESVEV 181
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R I+R+ + R +I++Y KD RY + + +HDQ+K A+ +EL + DVIG
Sbjct: 43 RLIKRFTVSKKRTVILKYTKDVRYGEVNEAVSHDQEKWEAIPTMELMPCVKEALHYDVIG 102
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFFPD++ F+E MA+ GK V++AALDGTFQR F I ++PL E V KL AVC+
Sbjct: 103 IDEGQFFPDLLEFSELMADYGKRVIIAALDGTFQRKVFGQITDIVPLCESVRKLRAVCVF 162
Query: 138 CFRDAAFTKRIGQEKEV 154
C A+F+ R +E+ V
Sbjct: 163 CGNKASFSMRTTEEESV 179
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 230 EGQFVEVIGGSDKYMAVCRECYKQK 254
E + VEVIGG++KY AVCR+CY K
Sbjct: 175 EEESVEVIGGAEKYCAVCRKCYHDK 199
>gi|71407675|ref|XP_806291.1| thymidine kinase [Trypanosoma cruzi strain CL Brener]
gi|70869991|gb|EAN84440.1| thymidine kinase, putative [Trypanosoma cruzi]
Length = 415
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 110/199 (55%), Gaps = 49/199 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV- 211
E+I+GPMF+GKTTEL+RR+RR +A C ++++++D RY E VS+HD+ L A +AV
Sbjct: 157 ELIIGPMFAGKTTELMRRVRRELFARRSCYVIKHSRDARYSRESVSSHDKLLLGATAAVA 216
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
EL ++ DV+ +DEGQF
Sbjct: 217 ELREVGDAWCPYDVVAVDEGQF-------------------------------------- 238
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+V+F + A+AGK V+V+ALDG ++R F+ I LIPLAE V+KLTAVC
Sbjct: 239 --------FPDIVAFCNTAADAGKTVIVSALDGDYRRQPFDGICRLIPLAESVKKLTAVC 290
Query: 332 MSCF-RDAAFTKR-IGQEK 348
M C R A+FT R + EK
Sbjct: 291 MECHCRSASFTYRTVSSEK 309
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV-ELNKLIPHTKDIDVIG 77
RR+RR +A C ++++++D RY E V++HD+ L A +AV EL ++ DV+
Sbjct: 173 RRVRRELFARRSCYVIKHSRDARYSRESVSSHDKLLLGATAAVAELREVGDAWCPYDVVA 232
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+DEGQFFPD+V+F + A+AGK V+V+ALDG ++R F+ I LIPLAE V+KLTAVCM
Sbjct: 233 VDEGQFFPDIVAFCNTAADAGKTVIVSALDGDYRRQPFDGICRLIPLAESVKKLTAVCME 292
Query: 138 CF-RDAAFTKR-IGQEKEVILG 157
C R A+FT R + EK ++G
Sbjct: 293 CHCRSASFTYRTVSSEKRELIG 314
>gi|54306338|gb|AAV33354.1| thymidine kinase [Canarypox virus]
Length = 179
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 49/205 (23%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY---DTEKVSTHDQQKLTA 207
E +I GPMFSGKT+ELIR I+R+ + +C+I+++ D+RY D E V THD+ + A
Sbjct: 5 EIRLITGPMFSGKTSELIRLIKRFTISGRKCIIIKHCCDNRYIDKDLESVCTHDKITMKA 64
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+S +L L+P +VIG+DEGQF
Sbjct: 65 LSCDKLLPLMPKMDGFEVIGVDEGQF---------------------------------- 90
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+V F+E MAN GKIV++AAL+G F+R F +I L+ L+E V L
Sbjct: 91 ------------FEDIVEFSEIMANKGKIVIIAALNGDFKRELFGNIFKLLSLSESVTSL 138
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TA+C C +A+F+KR +K++++
Sbjct: 139 TAICAVCKNEASFSKRTTDDKDIKV 163
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 93/139 (66%), Gaps = 3/139 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY---DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
R I+R+ + +C+I+++ D+RY D E V THD+ + A+S +L L+P +V
Sbjct: 23 RLIKRFTISGRKCIIIKHCCDNRYIDKDLESVCTHDKITMKALSCDKLLPLMPKMDGFEV 82
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IG+DEGQFF D+V F+E MAN GKIV++AAL+G F+R F +I L+ L+E V LTA+C
Sbjct: 83 IGVDEGQFFEDIVEFSEIMANKGKIVIIAALNGDFKRELFGNIFKLLSLSESVTSLTAIC 142
Query: 136 MSCFRDAAFTKRIGQEKEV 154
C +A+F+KR +K++
Sbjct: 143 AVCKNEASFSKRTTDDKDI 161
>gi|4454107|emb|CAA77155.1| thymidine kinase [Cowpox virus]
gi|4454109|emb|CAA77156.1| thymidine kinase [Cowpox virus]
Length = 113
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 7 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 65
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E
Sbjct: 66 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSE 113
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 86/160 (53%), Gaps = 47/160 (29%)
Query: 163 KTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKD 222
K+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D
Sbjct: 1 KSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITD 59
Query: 223 IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPD 282
VIGIDEGQF FPD
Sbjct: 60 FSVIGIDEGQF----------------------------------------------FPD 73
Query: 283 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E
Sbjct: 74 IVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSE 113
>gi|4454103|emb|CAA77153.1| thymidine kinase [Cowpox virus]
gi|237874675|gb|ACR27098.1| TK [Cowpox virus]
gi|237874677|gb|ACR27099.1| TK [Cowpox virus]
gi|237874679|gb|ACR27100.1| TK [Cowpox virus]
gi|237874681|gb|ACR27101.1| TK [Cowpox virus]
gi|237874683|gb|ACR27102.1| TK [Cowpox virus]
gi|237874685|gb|ACR27103.1| TK [Cowpox virus]
gi|237874687|gb|ACR27104.1| TK [Cowpox virus]
gi|237874689|gb|ACR27105.1| TK [Cowpox virus]
gi|237874691|gb|ACR27106.1| TK [Cowpox virus]
gi|237874693|gb|ACR27107.1| TK [Cowpox virus]
gi|237874695|gb|ACR27108.1| TK [Cowpox virus]
gi|237874697|gb|ACR27109.1| TK [Cowpox virus]
gi|237874699|gb|ACR27110.1| TK [Cowpox virus]
gi|237874701|gb|ACR27111.1| TK [Cowpox virus]
gi|237874703|gb|ACR27112.1| TK [Cowpox virus]
gi|237874705|gb|ACR27113.1| TK [Cowpox virus]
gi|237874707|gb|ACR27114.1| TK [Cowpox virus]
gi|237874709|gb|ACR27115.1| TK [Cowpox virus]
gi|237874711|gb|ACR27116.1| TK [Cowpox virus]
gi|237874713|gb|ACR27117.1| TK [Cowpox virus]
gi|237874715|gb|ACR27118.1| TK [Cowpox virus]
Length = 113
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 7 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLCDVLEAITDFSVIGI 65
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E
Sbjct: 66 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSE 113
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 86/160 (53%), Gaps = 47/160 (29%)
Query: 163 KTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKD 222
K+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D
Sbjct: 1 KSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLCDVLEAITD 59
Query: 223 IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPD 282
VIGIDEGQF FPD
Sbjct: 60 FSVIGIDEGQF----------------------------------------------FPD 73
Query: 283 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E
Sbjct: 74 IVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSE 113
>gi|40556051|ref|NP_955136.1| CNPV113 thymidine kinase [Canarypox virus]
gi|40233876|gb|AAR83459.1| CNPV113 thymidine kinase [Canarypox virus]
Length = 179
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 49/205 (23%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY---DTEKVSTHDQQKLTA 207
E +I GPMFSGKT+ELIR I+R+ + C+I+++ D RY D E + THD+ + A
Sbjct: 5 EIRLITGPMFSGKTSELIRLIKRFIISGRNCIIIKHCCDTRYIDKDLETICTHDKITMEA 64
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+S +L LIP + +VIGIDEGQF
Sbjct: 65 LSCSKLLPLIPKIDNFEVIGIDEGQF---------------------------------- 90
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+V F+E MAN GK V++AAL+G F+R F +I L+ L+E V L
Sbjct: 91 ------------FEDIVEFSEIMANKGKTVIIAALNGDFKRELFGNIFKLLSLSESVTSL 138
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TA+C C +A+F+KR+ +K+V++
Sbjct: 139 TAICAVCKNEASFSKRMTDDKDVKV 163
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 3/139 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY---DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
R I+R+ + C+I+++ D RY D E + THD+ + A+S +L LIP + +V
Sbjct: 23 RLIKRFIISGRNCIIIKHCCDTRYIDKDLETICTHDKITMEALSCSKLLPLIPKIDNFEV 82
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IGIDEGQFF D+V F+E MAN GK V++AAL+G F+R F +I L+ L+E V LTA+C
Sbjct: 83 IGIDEGQFFEDIVEFSEIMANKGKTVIIAALNGDFKRELFGNIFKLLSLSESVTSLTAIC 142
Query: 136 MSCFRDAAFTKRIGQEKEV 154
C +A+F+KR+ +K+V
Sbjct: 143 AVCKNEASFSKRMTDDKDV 161
>gi|403340224|gb|EJY69387.1| Thymidine kinase [Oxytricha trifallax]
Length = 284
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 107/196 (54%), Gaps = 50/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK-VSTHDQQKLTAVSAV 211
E+ILGPMFSGK+TEL+R I+R++ AN +C+I+ + DDRY V+THD+ ++ A+S
Sbjct: 13 ELILGPMFSGKSTELVRIIKRHRIANKKCLIINHQLDDRYSAPNYVATHDRIQMEAMSCT 72
Query: 212 ELNKLIPHTK---DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L K + K D DVIGIDEGQF
Sbjct: 73 SLIKDVIDRKVYEDYDVIGIDEGQF----------------------------------- 97
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
F D V E++A GK+V+VA+LDGTFQR F +L+LIPLAE V KL+
Sbjct: 98 -----------FQDAVQGCETLAQLGKVVIVASLDGTFQRKPFGCLLNLIPLAEKVRKLS 146
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C +A+FT R+
Sbjct: 147 AICKECSDNASFTLRL 162
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 38/237 (16%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEK-VATHDQQKLTAVSAVELNKLIPHTK---DID 74
R I+R++ AN +C+I+ + DDRY VATHD+ ++ A+S L K + K D D
Sbjct: 29 RIIKRHRIANKKCLIINHQLDDRYSAPNYVATHDRIQMEAMSCTSLIKDVIDRKVYEDYD 88
Query: 75 VIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
VIGIDEGQFF D V E++A GK+V+VA+LDGTFQR F +L+LIPLAE V KL+A+
Sbjct: 89 VIGIDEGQFFQDAVQGCETLAQLGKVVIVASLDGTFQRKPFGCLLNLIPLAEKVRKLSAI 148
Query: 135 CMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDT 194
C C +A+FT R+ + + + PM E R + Q + K ++
Sbjct: 149 CKECSDNASFTLRLTKNDQSLSLPM---NCDECSRAVNSQQQLAQN--LTNDEKANKQQQ 203
Query: 195 EKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECY 251
+K+ ++K +E+IGG + Y VCR+CY
Sbjct: 204 QKLPIQQEEK-----------------------------IELIGGEELYKPVCRQCY 231
>gi|54306346|gb|AAV33361.1| thymidine kinase [Canarypox virus]
Length = 179
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 109/205 (53%), Gaps = 49/205 (23%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY---DTEKVSTHDQQKLTA 207
E +I GPMFSGKT+ELIR I+R+ + C+I+++ D+RY D E V THD+ + A
Sbjct: 5 EIRLITGPMFSGKTSELIRLIKRFTISGRNCIIIKHCCDNRYIDKDLESVCTHDKITMKA 64
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+S +L L+P +VIG+DEGQF
Sbjct: 65 LSCDKLLPLMPKMDGFEVIGVDEGQF---------------------------------- 90
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+V F+E MAN GKIV++AAL+G F+R F +I L+ L+E V L
Sbjct: 91 ------------FEDIVEFSEIMANKGKIVIIAALNGDFKRELFGNIFKLLSLSESVTSL 138
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TA+C C +A+F+KR +K++++
Sbjct: 139 TAICAVCKNEASFSKRTTDDKDIKV 163
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 92/139 (66%), Gaps = 3/139 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY---DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
R I+R+ + C+I+++ D+RY D E V THD+ + A+S +L L+P +V
Sbjct: 23 RLIKRFTISGRNCIIIKHCCDNRYIDKDLESVCTHDKITMKALSCDKLLPLMPKMDGFEV 82
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IG+DEGQFF D+V F+E MAN GKIV++AAL+G F+R F +I L+ L+E V LTA+C
Sbjct: 83 IGVDEGQFFEDIVEFSEIMANKGKIVIIAALNGDFKRELFGNIFKLLSLSESVTSLTAIC 142
Query: 136 MSCFRDAAFTKRIGQEKEV 154
C +A+F+KR +K++
Sbjct: 143 AVCKNEASFSKRTTDDKDI 161
>gi|343473799|emb|CCD14410.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 272
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 107/199 (53%), Gaps = 48/199 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
E+++GPMF+GKTTEL+ R+ R A++ C +++Y+KD RY E +STHDQ+ LTA VS
Sbjct: 11 ELVIGPMFAGKTTELMSRVNRNYLASHSCYVIKYSKDVRYSKESISTHDQRTLTATVSVT 70
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L+++ ++ DVI +DEGQF
Sbjct: 71 KLSEVGNAWREYDVIAVDEGQF-------------------------------------- 92
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D++ F ANAGK V+VAALDG ++ F +I LIP AE V KL+AVC
Sbjct: 93 --------FQDILEFCSMAANAGKKVIVAALDGDYRNEPFENIAKLIPAAESVTKLSAVC 144
Query: 332 MSCFR-DAAFTKRIGQEKE 349
MSC DA FT R Q ++
Sbjct: 145 MSCKSCDAYFTHRTVQSEQ 163
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 95/142 (66%), Gaps = 4/142 (2%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIGI 78
R+ R A++ C +++Y+KD RY E ++THDQ+ LTA VS +L+++ ++ DVI +
Sbjct: 28 RVNRNYLASHSCYVIKYSKDVRYSKESISTHDQRTLTATVSVTKLSEVGNAWREYDVIAV 87
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQFF D++ F ANAGK V+VAALDG ++ F +I LIP AE V KL+AVCMSC
Sbjct: 88 DEGQFFQDILEFCSMAANAGKKVIVAALDGDYRNEPFENIAKLIPAAESVTKLSAVCMSC 147
Query: 139 FR-DAAFTKRIGQ--EKEVILG 157
DA FT R Q ++E+I G
Sbjct: 148 KSCDAYFTHRTVQSEQRELIGG 169
>gi|119609912|gb|EAW89506.1| thymidine kinase 1, soluble, isoform CRA_b [Homo sapiens]
Length = 181
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 77/103 (74%)
Query: 52 QQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQ 111
Q + A+ A L + + VIGIDEGQFFPD+V F E+MANAGK V+VAALDGTFQ
Sbjct: 17 QNTMEALPACLLRDVAQEALGVAVIGIDEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQ 76
Query: 112 RTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
R F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV
Sbjct: 77 RKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEV 119
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 81/161 (50%), Gaps = 48/161 (29%)
Query: 194 TEKVSTH--DQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECY 251
T S H Q + A+ A L + + VIGIDEGQF
Sbjct: 7 TAAASAHMTGQNTMEALPACLLRDVAQEALGVAVIGIDEGQF------------------ 48
Query: 252 KQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGF 311
FPD+V F E+MANAGK V+VAALDGTFQR F
Sbjct: 49 ----------------------------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPF 80
Query: 312 NDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV +
Sbjct: 81 GAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEV 121
>gi|4454159|emb|CAA77157.1| thymidine kinase [Ectromelia virus]
Length = 113
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 7 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVMDAVTDFSVIGI 65
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E
Sbjct: 66 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSE 113
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 85/160 (53%), Gaps = 47/160 (29%)
Query: 163 KTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKD 222
K+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D
Sbjct: 1 KSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVMDAVTD 59
Query: 223 IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPD 282
VIGIDEGQF FPD
Sbjct: 60 FSVIGIDEGQF----------------------------------------------FPD 73
Query: 283 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
+V F E MAN GKIV+VAALDGTFQR FN+IL LIPL+E
Sbjct: 74 IVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSE 113
>gi|427780929|gb|JAA55916.1| Putative thymidine kinase cytosolic [Rhipicephalus pulchellus]
Length = 128
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 77/100 (77%)
Query: 55 LTAVSAVELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTG 114
+ AV A L+ L D VIGIDEGQFFPD+V FAE MA+ GK+VV+AALDGT+QR G
Sbjct: 1 MAAVKATSLSDLKSTLSDFRVIGIDEGQFFPDIVEFAEYMADTGKVVVIAALDGTYQRQG 60
Query: 115 FNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
F IL+L+PL+E V KL+AVCM C+ +AA+TKR GQEKEV
Sbjct: 61 FPSILTLVPLSESVIKLSAVCMVCYAEAAYTKRRGQEKEV 100
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 78/148 (52%), Gaps = 46/148 (31%)
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ AV A L+ L D VIGIDEGQF
Sbjct: 1 MAAVKATSLSDLKSTLSDFRVIGIDEGQF------------------------------- 29
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
FPD+V FAE MA+ GK+VV+AALDGT+QR GF IL+L+PL+E V
Sbjct: 30 ---------------FPDIVEFAEYMADTGKVVVIAALDGTYQRQGFPSILTLVPLSESV 74
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KL+AVCM C+ +AA+TKR GQEKEV +
Sbjct: 75 IKLSAVCMVCYAEAAYTKRRGQEKEVEV 102
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 18/20 (90%)
Query: 234 VEVIGGSDKYMAVCRECYKQ 253
VEVIGG+DKYMAVCR CY Q
Sbjct: 100 VEVIGGADKYMAVCRTCYSQ 119
>gi|4454105|emb|CAA77154.1| thymidine kinase [Cowpox virus]
Length = 113
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 7 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLCDVLEAITDFSVIGI 65
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
DEGQFF D+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E
Sbjct: 66 DEGQFFTDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSE 113
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 47/160 (29%)
Query: 163 KTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKD 222
K+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D
Sbjct: 1 KSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEATKLCDVLEAITD 59
Query: 223 IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPD 282
VIGIDEGQF F D
Sbjct: 60 FSVIGIDEGQF----------------------------------------------FTD 73
Query: 283 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
+V F E MAN GKIV+VAALDGTFQR FN+IL+LIPL+E
Sbjct: 74 IVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSE 113
>gi|401421777|ref|XP_003875377.1| putative thymidine kinase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491614|emb|CBZ26887.1| putative thymidine kinase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 284
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 48/193 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I+GPMF+GKTTEL+RR++R YA C +++Y+KD RYD V++HDQ L A +AV
Sbjct: 7 ELIIGPMFAGKTTELMRRVKREIYARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAVS 66
Query: 213 -LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L ++ K DV+ IDEGQF
Sbjct: 67 RLTEVQDTWKRFDVLAIDEGQF-------------------------------------- 88
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D+V F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVC
Sbjct: 89 --------FSDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVC 140
Query: 332 MSCF-RDAAFTKR 343
M C + A FT+R
Sbjct: 141 MMCHEQPACFTRR 153
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-LNKLIPHTKDIDVIG 77
RR++R YA C +++Y+KD RYD VA+HDQ L A +AV L ++ K DV+
Sbjct: 23 RRVKREIYARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAVSRLTEVQDTWKRFDVLA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVCM
Sbjct: 83 IDEGQFFSDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMM 142
Query: 138 CF-RDAAFTKR-IGQEKEVILG 157
C + A FT+R + E++ ++G
Sbjct: 143 CHEQPACFTRRTVNVEQQELIG 164
>gi|154337224|ref|XP_001564845.1| putative thymidine kinase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061883|emb|CAM38921.1| putative thymidine kinase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 283
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 103/193 (53%), Gaps = 48/193 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I+GPMF+GKTTEL+RR++R +A + C +++Y+KD RYD V++HDQ L A +AV
Sbjct: 7 ELIIGPMFAGKTTELMRRVKREIHARHSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAVS 66
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
K + T + DV+ IDEGQF
Sbjct: 67 QLKEVQDTWQRFDVLAIDEGQF-------------------------------------- 88
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D+V F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVC
Sbjct: 89 --------FSDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVC 140
Query: 332 MSCFRD-AAFTKR 343
M C A FT+R
Sbjct: 141 MMCHEQPACFTRR 153
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 94/142 (66%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDVIG 77
RR++R +A + C +++Y+KD RYD VA+HDQ L A +AV K + T + DV+
Sbjct: 23 RRVKREIHARHSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAVSQLKEVQDTWQRFDVLA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVCM
Sbjct: 83 IDEGQFFSDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMM 142
Query: 138 CFRD-AAFTKR-IGQEKEVILG 157
C A FT+R + E++ ++G
Sbjct: 143 CHEQPACFTRRTVKVEQQELIG 164
>gi|146085975|ref|XP_001465409.1| putative thymidine kinase [Leishmania infantum JPCM5]
gi|398014944|ref|XP_003860662.1| thymidine kinase, putative [Leishmania donovani]
gi|134069507|emb|CAM67830.1| putative thymidine kinase [Leishmania infantum JPCM5]
gi|322498884|emb|CBZ33957.1| thymidine kinase, putative [Leishmania donovani]
Length = 284
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 105/193 (54%), Gaps = 48/193 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV- 211
E+I+GPMF+GKTTEL+RR++R +A C +++Y+KD RYD V++HDQ L A +AV
Sbjct: 7 ELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAVS 66
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L ++ K DV+ IDEGQF
Sbjct: 67 QLTEVRDTWKRFDVLAIDEGQF-------------------------------------- 88
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D+V+F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVC
Sbjct: 89 --------FSDLVNFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVC 140
Query: 332 MSCF-RDAAFTKR 343
M C + A FT+R
Sbjct: 141 MMCHEQPACFTRR 153
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 96/142 (67%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV-ELNKLIPHTKDIDVIG 77
RR++R +A C +++Y+KD RYD VA+HDQ L A +AV +L ++ K DV+
Sbjct: 23 RRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAVSQLTEVRDTWKRFDVLA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V+F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVCM
Sbjct: 83 IDEGQFFSDLVNFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMM 142
Query: 138 CF-RDAAFTKR-IGQEKEVILG 157
C + A FT+R + E++ ++G
Sbjct: 143 CHEQPACFTRRTVNVEQQELIG 164
>gi|157869042|ref|XP_001683073.1| putative thymidine kinase [Leishmania major strain Friedlin]
gi|68223956|emb|CAJ04639.1| putative thymidine kinase [Leishmania major strain Friedlin]
Length = 284
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 48/193 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV- 211
E+I+GPMF+GKTTEL+RR++R +A C +++Y+KD RYD V++HDQ L A +AV
Sbjct: 7 ELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAVS 66
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L ++ K DV+ IDEGQF
Sbjct: 67 QLTEVRDTWKRFDVLAIDEGQF-------------------------------------- 88
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D+V F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVC
Sbjct: 89 --------FSDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVC 140
Query: 332 MSCF-RDAAFTKR 343
M C + A FT+R
Sbjct: 141 MMCHEQPACFTRR 153
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 95/142 (66%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV-ELNKLIPHTKDIDVIG 77
RR++R +A C +++Y+KD RYD VA+HDQ L A +AV +L ++ K DV+
Sbjct: 23 RRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAVSQLTEVRDTWKRFDVLA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVCM
Sbjct: 83 IDEGQFFSDLVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMM 142
Query: 138 CF-RDAAFTKR-IGQEKEVILG 157
C + A FT+R + E++ ++G
Sbjct: 143 CHEQPACFTRRTVNVEQQELIG 164
>gi|226821427|gb|ACO82389.1| thymidine kinase [Cowpox virus]
Length = 107
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 4 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEAITDFSVIGI 62
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 123
DEGQFFPD+V F E MAN GKIV+VAALDGTFQR FN+IL+LIP
Sbjct: 63 DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIP 107
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 80/154 (51%), Gaps = 47/154 (30%)
Query: 166 ELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDV 225
ELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D V
Sbjct: 1 ELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEAITDFSV 59
Query: 226 IGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVS 285
IGIDEGQF FPD+V
Sbjct: 60 IGIDEGQF----------------------------------------------FPDIVE 73
Query: 286 FAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 319
F E MAN GKIV+VAALDGTFQR FN+IL+LIP
Sbjct: 74 FCERMANEGKIVIVAALDGTFQRKPFNNILNLIP 107
>gi|340056694|emb|CCC51030.1| putative thymidine kinase [Trypanosoma vivax Y486]
Length = 272
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 112/203 (55%), Gaps = 49/203 (24%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VS 209
E ++I+GPM++GKTTEL++R+ R YA+++C IV+++KD RY T+ + TH+ KL A +S
Sbjct: 36 ELQLIIGPMYAGKTTELMKRVTREIYAHHKCYIVKHSKDTRYCTQSLCTHNMAKLVATIS 95
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+L+ + K+ DV+ +DEGQF
Sbjct: 96 VTKLSDIGDVWKEYDVVAVDEGQF------------------------------------ 119
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
F DV+ F++ +A+AGK V+V+ALD + R F DI L+ LA+ V KLTA
Sbjct: 120 ----------FSDVLEFSKKVADAGKKVIVSALDSDYLREPFRDICLLVGLADSVTKLTA 169
Query: 330 VCMSCFRDAAFTKRI--GQEKEV 350
VC C DA+FT R+ QE+E+
Sbjct: 170 VCTVCSHDASFTHRVVDNQEREL 192
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 96/140 (68%), Gaps = 3/140 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIG 77
+R+ R YA+++C IV+++KD RY T+ + TH+ KL A +S +L+ + K+ DV+
Sbjct: 54 KRVTREIYAHHKCYIVKHSKDTRYCTQSLCTHNMAKLVATISVTKLSDIGDVWKEYDVVA 113
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
+DEGQFF DV+ F++ +A+AGK V+V+ALD + R F DI L+ LA+ V KLTAVC
Sbjct: 114 VDEGQFFSDVLEFSKKVADAGKKVIVSALDSDYLREPFRDICLLVGLADSVTKLTAVCTV 173
Query: 138 CFRDAAFTKRI--GQEKEVI 155
C DA+FT R+ QE+E++
Sbjct: 174 CSHDASFTHRVVDNQERELV 193
>gi|157384637|gb|ABV49611.1| thymidine kinase [Leishmania donovani]
Length = 284
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 104/193 (53%), Gaps = 48/193 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
E+I+GPMF+GKTTEL+RR++R +A C +++Y+KD RYD V++HDQ L A +A
Sbjct: 7 ELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAAS 66
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L ++ K DV+ IDEGQF
Sbjct: 67 QLTEVRDTWKRFDVLAIDEGQF-------------------------------------- 88
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D+V+F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVC
Sbjct: 89 --------FSDLVNFCNTAADAGKVVMVSALDGDYRRKPFGQICKLVPYCEAVDKLTAVC 140
Query: 332 MSCF-RDAAFTKR 343
M C + A FT+R
Sbjct: 141 MMCHEQPACFTRR 153
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 95/142 (66%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIG 77
RR++R +A C +++Y+KD RYD VA+HDQ L A +A +L ++ K DV+
Sbjct: 23 RRVKREIHARRSCFVIKYSKDTRYDEHNVASHDQLMLRAQAAASQLTEVRDTWKRFDVLA 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDEGQFF D+V+F + A+AGK+V+V+ALDG ++R F I L+P E V+KLTAVCM
Sbjct: 83 IDEGQFFSDLVNFCNTAADAGKVVMVSALDGDYRRKPFGQICKLVPYCEAVDKLTAVCMM 142
Query: 138 CF-RDAAFTKR-IGQEKEVILG 157
C + A FT+R + E++ ++G
Sbjct: 143 CHEQPACFTRRTVNVEQQELIG 164
>gi|427780919|gb|JAA55911.1| Putative thymidine kinase cytosolic [Rhipicephalus pulchellus]
Length = 128
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 76/100 (76%)
Query: 55 LTAVSAVELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTG 114
+ AV A L+ L VIGIDEGQFFPD+V FAE MA+ GK+VV+AALDGT+QR G
Sbjct: 1 MAAVKATSLSDLKSTLSGFRVIGIDEGQFFPDIVEFAEYMADTGKVVVIAALDGTYQRQG 60
Query: 115 FNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
F IL+L+PL+E V KL+AVCM C+ +AA+TKR GQEKEV
Sbjct: 61 FPSILTLVPLSESVIKLSAVCMVCYAEAAYTKRRGQEKEV 100
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 77/148 (52%), Gaps = 46/148 (31%)
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ AV A L+ L VIGIDEGQF
Sbjct: 1 MAAVKATSLSDLKSTLSGFRVIGIDEGQF------------------------------- 29
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
FPD+V FAE MA+ GK+VV+AALDGT+QR GF IL+L+PL+E V
Sbjct: 30 ---------------FPDIVEFAEYMADTGKVVVIAALDGTYQRQGFPSILTLVPLSESV 74
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KL+AVCM C+ +AA+TKR GQEKEV +
Sbjct: 75 IKLSAVCMVCYAEAAYTKRRGQEKEVEV 102
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 18/20 (90%)
Query: 234 VEVIGGSDKYMAVCRECYKQ 253
VEVIGG+DKYMAVCR CY Q
Sbjct: 100 VEVIGGADKYMAVCRTCYSQ 119
>gi|340508335|gb|EGR34057.1| thymidine kinase, putative [Ichthyophthirius multifiliis]
Length = 198
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 54/199 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSA- 210
++I GPMFSGKT+EL+R ++RY YA +C++V Y KD+RY ++ + THD+ L ++
Sbjct: 12 QLIYGPMFSGKTSELLRIVKRYSYAKKKCLVVNYIKDNRYTESTSICTHDKITLDNNNSY 71
Query: 211 ------VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
++L +++ + DVI IDEGQF
Sbjct: 72 IQTQKCLKLQEIMEKYEMFDVIAIDEGQF------------------------------- 100
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ + AN GKIV+VAALD TFQR FN+IL+L+ ++E V
Sbjct: 101 ---------------FQDIDEKCDFFANNGKIVLVAALDATFQRKPFNNILNLVCISESV 145
Query: 325 EKLTAVCMSCFRDAAFTKR 343
KLTAVC+SC +A+FTKR
Sbjct: 146 TKLTAVCVSCGGNASFTKR 164
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 92/137 (67%), Gaps = 8/137 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSA-------VELNKLIPHT 70
R ++RY YA +C++V Y KD+RY ++ + THD+ L ++ ++L +++
Sbjct: 28 RIVKRYSYAKKKCLVVNYIKDNRYTESTSICTHDKITLDNNNSYIQTQKCLKLQEIMEKY 87
Query: 71 KDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+ DVI IDEGQFF D+ + AN GKIV+VAALD TFQR FN+IL+L+ ++E V K
Sbjct: 88 EMFDVIAIDEGQFFQDIDEKCDFFANNGKIVLVAALDATFQRKPFNNILNLVCISESVTK 147
Query: 131 LTAVCMSCFRDAAFTKR 147
LTAVC+SC +A+FTKR
Sbjct: 148 LTAVCVSCGGNASFTKR 164
>gi|324528577|gb|ADY48925.1| Thymidine kinase, cytosolic, partial [Ascaris suum]
Length = 183
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 104/225 (46%), Gaps = 52/225 (23%)
Query: 134 VCMSCFRDAA--FTKRIGQEK---EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAK 188
+C C+ DA+ F + + EVILGPMFSGKTTE++RR R+ A C +++Y
Sbjct: 1 MCRQCYFDASQGFVRPHSPSRGRIEVILGPMFSGKTTEMLRRYNRHALAGRECRVIKYRG 60
Query: 189 DDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCR 248
D RYD KV+THDQ V A + + VI IDEGQF
Sbjct: 61 DTRYDANKVATHDQLMHDGVIATHIADIFDELLAYKVIAIDEGQF--------------- 105
Query: 249 ECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQR 308
F D+ E +AN GKIV+VAALDG + R
Sbjct: 106 -------------------------------FQDIAECCERLANMGKIVIVAALDGDYNR 134
Query: 309 TGF-NDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
F + +L L PLAE V KL AVC C DA+F++R K I
Sbjct: 135 REFASKLLDLCPLAEKVCKLRAVCTECGSDASFSRRTTAHKNQEI 179
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR R+ A C +++Y D RYD KVATHDQ V A + + VI I
Sbjct: 41 RRYNRHALAGRECRVIKYRGDTRYDANKVATHDQLMHDGVIATHIADIFDELLAYKVIAI 100
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGF-NDILSLIPLAECVEKLTAVCMS 137
DEGQFF D+ E +AN GKIV+VAALDG + R F + +L L PLAE V KL AVC
Sbjct: 101 DEGQFFQDIAECCERLANMGKIVIVAALDGDYNRREFASKLLDLCPLAEKVCKLRAVCTE 160
Query: 138 CFRDAAFTKRIGQEK--EVILG 157
C DA+F++R K E+I G
Sbjct: 161 CGSDASFSRRTTAHKNQEIIGG 182
>gi|129560572|dbj|BAF48867.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661598|dbj|BAH79684.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661600|dbj|BAH79685.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145864|gb|ADQ28639.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145866|gb|ADQ28640.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145868|gb|ADQ28641.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145870|gb|ADQ28642.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145872|gb|ADQ28643.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145874|gb|ADQ28644.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145876|gb|ADQ28645.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145878|gb|ADQ28646.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145880|gb|ADQ28647.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145882|gb|ADQ28648.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145884|gb|ADQ28649.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145886|gb|ADQ28650.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145888|gb|ADQ28651.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145890|gb|ADQ28652.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145892|gb|ADQ28653.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145894|gb|ADQ28654.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|312145896|gb|ADQ28655.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|343887634|gb|AEM65309.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|380850677|gb|AFE85867.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 224
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 18 CRRIRRYQYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
CRR+ R Y+ RC+ V++A D RY E KVA H A+SA L +++ ++ D +
Sbjct: 20 CRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAGYLYEVMQRLEEYDAV 79
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DEGQFFPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM
Sbjct: 80 AVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCM 139
Query: 137 SC-FRDAAFTKRIGQEKEVI 155
C RDA FT RI Q +++
Sbjct: 140 KCKMRDAPFTVRISQGTDLV 159
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 48/200 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAV 211
E+++GPMF+GK+TE RR+ R Y+ RC+ V++A D RY E KV+ H A+SA
Sbjct: 5 ELVIGPMFAGKSTESCRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAG 64
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L +++ ++ D + +DEGQF
Sbjct: 65 YLYEVMQRLEEYDAVAVDEGQF-------------------------------------- 86
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVC
Sbjct: 87 --------FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVC 138
Query: 332 MSC-FRDAAFTKRIGQEKEV 350
M C RDA FT RI Q ++
Sbjct: 139 MKCKMRDAPFTVRISQGTDL 158
>gi|131840081|ref|YP_001096090.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|27227778|emb|CAD59379.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|84181586|gb|ABC55189.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706656|gb|ABG42882.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661588|dbj|BAH79679.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661590|dbj|BAH79680.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661592|dbj|BAH79681.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661594|dbj|BAH79682.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|241661596|dbj|BAH79683.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|380850679|gb|AFE85868.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 216
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 18 CRRIRRYQYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
CRR+ R Y+ RC+ V++A D RY E KVA H A+SA L +++ ++ D +
Sbjct: 20 CRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAGYLYEVMQRLEEYDAV 79
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DEGQFFPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM
Sbjct: 80 AVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCM 139
Query: 137 SC-FRDAAFTKRIGQEKEVI 155
C RDA FT RI Q +++
Sbjct: 140 KCKMRDAPFTVRISQGTDLV 159
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 48/200 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAV 211
E+++GPMF+GK+TE RR+ R Y+ RC+ V++A D RY E KV+ H A+SA
Sbjct: 5 ELVIGPMFAGKSTESCRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAG 64
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L +++ ++ D + +DEGQF
Sbjct: 65 YLYEVMQRLEEYDAVAVDEGQF-------------------------------------- 86
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVC
Sbjct: 87 --------FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVC 138
Query: 332 MSC-FRDAAFTKRIGQEKEV 350
M C RDA FT RI Q ++
Sbjct: 139 MKCKMRDAPFTVRISQGTDL 158
>gi|284433306|gb|ADB85004.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|284433308|gb|ADB85005.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 197
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 2/140 (1%)
Query: 18 CRRIRRYQYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
CRR+ R Y+ RC+ V++A D RY E KVA H A+SA L +++ ++ D +
Sbjct: 18 CRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAGYLYEVMQRLEEYDAV 77
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DEGQFFPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM
Sbjct: 78 AVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCM 137
Query: 137 SC-FRDAAFTKRIGQEKEVI 155
C RDA FT RI Q +++
Sbjct: 138 KCKMRDAPFTVRISQGTDLV 157
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 48/200 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAV 211
E+++GPMF+GK+TE RR+ R Y+ RC+ V++A D RY E KV+ H A+SA
Sbjct: 3 ELVIGPMFAGKSTESCRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAG 62
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L +++ ++ D + +DEGQF
Sbjct: 63 YLYEVMQRLEEYDAVAVDEGQF-------------------------------------- 84
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVC
Sbjct: 85 --------FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVC 136
Query: 332 MSC-FRDAAFTKRIGQEKEV 350
M C RDA FT RI Q ++
Sbjct: 137 MKCKMRDAPFTVRISQGTDL 156
>gi|422933824|ref|YP_007003876.1| thymidine kinase [Cyprinid herpesvirus 2]
gi|386686137|gb|AFJ20489.1| thymidine kinase [Cyprinid herpesvirus 2]
Length = 214
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Query: 18 CRRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIP-HTKDIDV 75
CR + R + RC ++Y+ D+RY D + VATH K A+ A L L+P +D DV
Sbjct: 20 CRLLSRMTFTGGRCAAIKYSADNRYTDEDVVATHSGAKYPALVATHLESLMPVLLRDYDV 79
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IGIDEGQFF D+V ++ +A K V+V ALDG F + F ++L LIP+A V KLTAVC
Sbjct: 80 IGIDEGQFFEDLVDCVHTLLDAEKYVIVGALDGDFLQQPFWNVLQLIPVANKVTKLTAVC 139
Query: 136 MSCF-RDAAFTKRIGQEKEVI 155
M C RDA FT RI E++
Sbjct: 140 MMCTNRDAPFTVRITDSTEIV 160
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 99/201 (49%), Gaps = 49/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAV 211
E++LGPMFSGK+TE R + R + RC ++Y+ D+RY D + V+TH K A+ A
Sbjct: 5 ELVLGPMFSGKSTECCRLLSRMTFTGGRCAAIKYSADNRYTDEDVVATHSGAKYPALVAT 64
Query: 212 ELNKLIP-HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
L L+P +D DVIGIDEGQF
Sbjct: 65 HLESLMPVLLRDYDVIGIDEGQF------------------------------------- 87
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D+V ++ +A K V+V ALDG F + F ++L LIP+A V KLTAV
Sbjct: 88 ---------FEDLVDCVHTLLDAEKYVIVGALDGDFLQQPFWNVLQLIPVANKVTKLTAV 138
Query: 331 CMSCF-RDAAFTKRIGQEKEV 350
CM C RDA FT RI E+
Sbjct: 139 CMMCTNRDAPFTVRITDSTEI 159
>gi|116668529|gb|ABK15525.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 157
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 18 CRRIRRYQYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
CRR+ R Y+ RC+ V++A D RY E KVA H A+SA L +++ ++ D +
Sbjct: 19 CRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAGYLYEVMQRLEEYDAV 78
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DEGQFFPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM
Sbjct: 79 AVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCM 138
Query: 137 SC-FRDAAFTKRIGQ 150
C RDA FT RI Q
Sbjct: 139 KCKMRDAPFTVRISQ 153
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 98/196 (50%), Gaps = 48/196 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAV 211
E+++GPMF+GK+TE RR+ R Y+ RC+ V++A D RY E KV+ H A+SA
Sbjct: 4 ELVIGPMFAGKSTESCRRLERLSYSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAG 63
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L +++ ++ D + +DEGQF
Sbjct: 64 YLYEVMQRLEEYDAVAVDEGQF-------------------------------------- 85
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVC
Sbjct: 86 --------FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVC 137
Query: 332 MSC-FRDAAFTKRIGQ 346
M C RDA FT RI Q
Sbjct: 138 MKCKMRDAPFTVRISQ 153
>gi|254838359|gb|ACT83390.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 195
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 18 CRRIRRYQYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
CRR+ R Y+ RC+ V++ D RY E KVA H A+SA L +++ ++ D +
Sbjct: 11 CRRLERLSYSGPRCIAVKHGIDQRYTEESKVAMHSGATYPAISAGYLYEVMQRLEEYDAV 70
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DEGQFFPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM
Sbjct: 71 AVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCM 130
Query: 137 SC-FRDAAFTKRIGQEKEVI 155
C RDA FT RI Q +++
Sbjct: 131 KCKMRDAPFTVRISQGTDLV 150
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 48/194 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAVELNKLI 217
MF+ K+TE RR+ R Y+ RC+ V++ D RY E KV+ H A+SA L +++
Sbjct: 2 MFAAKSTESCRRLERLSYSGPRCIAVKHGIDQRYTEESKVAMHSGATYPAISAGYLYEVM 61
Query: 218 PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPP 277
++ D + +DEGQF
Sbjct: 62 QRLEEYDAVAVDEGQF-------------------------------------------- 77
Query: 278 PEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FR 336
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM C R
Sbjct: 78 --FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCMKCKMR 135
Query: 337 DAAFTKRIGQEKEV 350
DA FT RI Q ++
Sbjct: 136 DAPFTVRISQGTDL 149
>gi|343471538|emb|CCD16067.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 256
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 91/142 (64%), Gaps = 4/142 (2%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDIDVIGI 78
R+ R A Y C +++Y+KD Y E ++T+D++ L A VS +L+++ D DVI +
Sbjct: 12 RVNRNFLARYSCYVIKYSKDKGYTKENISTYDRRTLPATVSVNKLSEVGNAWHDYDVIAV 71
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
D GQFFPD++ F +ANAGK V+VAALDG ++ F I LIP AE V KL+AVCMSC
Sbjct: 72 DGGQFFPDILEFCSMVANAGKKVIVAALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSC 131
Query: 139 FR-DAAFTKRIGQ--EKEVILG 157
DA +T R Q ++E+I G
Sbjct: 132 KSCDAYYTHRTVQSEQRELIGG 153
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 97/193 (50%), Gaps = 48/193 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAVELNKLI 217
MF+GKTTEL+ R+ R A Y C +++Y+KD Y E +ST+D++ L A VS +L+++
Sbjct: 1 MFAGKTTELMSRVNRNFLARYSCYVIKYSKDKGYTKENISTYDRRTLPATVSVNKLSEVG 60
Query: 218 PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPP 277
D DVI +D GQF
Sbjct: 61 NAWHDYDVIAVDGGQF-------------------------------------------- 76
Query: 278 PEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFR- 336
FPD++ F +ANAGK V+VAALDG ++ F I LIP AE V KL+AVCMSC
Sbjct: 77 --FPDILEFCSMVANAGKKVIVAALDGDYRNEPFEHIAKLIPAAESVTKLSAVCMSCKSC 134
Query: 337 DAAFTKRIGQEKE 349
DA +T R Q ++
Sbjct: 135 DAYYTHRTVQSEQ 147
>gi|118401188|ref|XP_001032915.1| thymidine kinase family protein [Tetrahymena thermophila]
gi|89287260|gb|EAR85252.1| thymidine kinase family protein [Tetrahymena thermophila SB210]
Length = 247
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 21 IRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGID 79
I +Y+ + ++V +A D+RY D ++ TH +K AV EL ++ K+ DVI ID
Sbjct: 30 ILKYESEQKKVLVVGFAHDNRYSDEAEIVTHQHKKHHAVKCFELKEIEQQYKNYDVIAID 89
Query: 80 EGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 139
EGQFF D+ + AN GKIV+VAALD TFQR FN +L+LIP+AE V KL C SC
Sbjct: 90 EGQFFLDIADKCDQYANDGKIVIVAALDATFQRKAFNQVLNLIPVAEKVIKLRGKCSSCE 149
Query: 140 RDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVST 199
D++F+ R ELI Y+ C + + +K + D E S+
Sbjct: 150 EDSSFSSR-----------KIKSNLIELIGGEDLYEPLCRSCFLAKQSKQEELDQEDNSS 198
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 93/191 (48%), Gaps = 47/191 (24%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAVE 212
V GPMFSGK+T L+ I +Y+ + ++V +A D+RY D ++ TH +K AV E
Sbjct: 13 VYFGPMFSGKSTSLLNDILKYESEQKKVLVVGFAHDNRYSDEAEIVTHQHKKHHAVKCFE 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L ++ K+ DVI IDEGQF
Sbjct: 73 LKEIEQQYKNYDVIAIDEGQF--------------------------------------- 93
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F D+ + AN GKIV+VAALD TFQR FN +L+LIP+AE V KL C
Sbjct: 94 -------FLDIADKCDQYANDGKIVIVAALDATFQRKAFNQVLNLIPVAEKVIKLRGKCS 146
Query: 333 SCFRDAAFTKR 343
SC D++F+ R
Sbjct: 147 SCEEDSSFSSR 157
>gi|422933596|ref|YP_007003721.1| thymidine kinase [Cyprinid herpesvirus 1]
gi|386686002|gb|AFJ20355.1| thymidine kinase [Cyprinid herpesvirus 1]
Length = 181
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEK-VATHDQQKLTAVSAVELNKLIPHTKDIDV 75
CRR+ R + +C+ V++ D RY + V TH+ K A+ A +L + D
Sbjct: 18 MCRRLTRLAISGRQCLAVKFFGDTRYTLDAAVVTHNGDKYPALVACKLGDIFEDLIKADA 77
Query: 76 IGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
+GIDEGQFFPD+ + GKIV+VAALDGT+++T F D+L LIP E V KLTAVC
Sbjct: 78 VGIDEGQFFPDLYEVVHKLLALGKIVLVAALDGTYKQTPFEDVLKLIPHCESVVKLTAVC 137
Query: 136 MSCF-RDAAFTKRIGQEKEVIL 156
+ C ++A FT R K+++L
Sbjct: 138 LICRDKEAPFTIRTSSGKDLVL 159
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 97/200 (48%), Gaps = 48/200 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK-VSTHDQQKLTAVSAV 211
E+ILGPMF+GK+TE+ RR+ R + +C+ V++ D RY + V TH+ K A+ A
Sbjct: 4 ELILGPMFAGKSTEMCRRLTRLAISGRQCLAVKFFGDTRYTLDAAVVTHNGDKYPALVAC 63
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L + D +GIDEGQF
Sbjct: 64 KLGDIFEDLIKADAVGIDEGQF-------------------------------------- 85
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FPD+ + GKIV+VAALDGT+++T F D+L LIP E V KLTAVC
Sbjct: 86 --------FPDLYEVVHKLLALGKIVLVAALDGTYKQTPFEDVLKLIPHCESVVKLTAVC 137
Query: 332 MSCF-RDAAFTKRIGQEKEV 350
+ C ++A FT R K++
Sbjct: 138 LICRDKEAPFTIRTSSGKDL 157
>gi|441643977|ref|XP_004092998.1| PREDICTED: LOW QUALITY PROTEIN: thymidine kinase, cytosolic
[Nomascus leucogenys]
Length = 335
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 63/76 (82%)
Query: 277 PPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFR 336
P +FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR
Sbjct: 200 PFQFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFR 259
Query: 337 DAAFTKRIGQEKEVRI 352
+AA+TKR+G EKEV +
Sbjct: 260 EAAYTKRLGTEKEVEV 275
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 60/71 (84%)
Query: 84 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAA 143
FPD+V F E+MANAGK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+AA
Sbjct: 203 FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAA 262
Query: 144 FTKRIGQEKEV 154
+TKR+G EKEV
Sbjct: 263 YTKRLGTEKEV 273
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 11/88 (12%)
Query: 146 KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
K + QE E ++TEL+RR+RR+Q A Y+C++++YAKD RY + THD+ +
Sbjct: 17 KPLAQEDEA--------QSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTM 67
Query: 206 TAVSAVELNKLIPHTKDIDVIGIDEGQF 233
A+ A L + + V I++G F
Sbjct: 68 EALPACLLRDVAQXALGVAV--IEQGSF 93
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + V I
Sbjct: 32 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQXALGVAV--I 88
Query: 79 DEGQFFPDVVSFAESMANAGKIVV 102
++G F SF +++ + ++V
Sbjct: 89 EQGSF-----SFGKALPPSDLLLV 107
>gi|47223840|emb|CAG06017.1| unnamed protein product [Tetraodon nigroviridis]
Length = 161
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 77/136 (56%), Gaps = 30/136 (22%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY +ATHD+ + AV A L + + VIGI
Sbjct: 38 RRVRRFQLAQYKCLVIKYAKDTRYSDTGMATHDKNTMEAVPANCLADVRSMALQVCVIGI 97
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DEGQF F +IL+L+PLAE V KL AVCM C
Sbjct: 98 DEGQF------------------------------AFGNILNLVPLAESVVKLNAVCMQC 127
Query: 139 FRDAAFTKRIGQEKEV 154
F++AA+TKRIG EKEV
Sbjct: 128 FKEAAYTKRIGAEKEV 143
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 78/146 (53%), Gaps = 40/146 (27%)
Query: 146 KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
KR + +VI GPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY ++THD+ +
Sbjct: 15 KRGRGQIQVIFGPMFSGKSTELMRRVRRFQLAQYKCLVIKYAKDTRYSDTGMATHDKNTM 74
Query: 206 TAVSAVELNKLIPHTKDIDVIGIDEGQF-------------------------------- 233
AV A L + + VIGIDEGQF
Sbjct: 75 EAVPANCLADVRSMALQVCVIGIDEGQFAFGNILNLVPLAESVVKLNAVCMQCFKEAAYT 134
Query: 234 --------VEVIGGSDKYMAVCRECY 251
VEVIGG+DKY AVCR+C+
Sbjct: 135 KRIGAEKEVEVIGGADKYQAVCRKCH 160
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 286 FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIG 345
A+ + A ++ V+ +G F F +IL+L+PLAE V KL AVCM CF++AA+TKRIG
Sbjct: 82 LADVRSMALQVCVIGIDEGQF---AFGNILNLVPLAESVVKLNAVCMQCFKEAAYTKRIG 138
Query: 346 QEKEVRI 352
EKEV +
Sbjct: 139 AEKEVEV 145
>gi|9964330|ref|NP_064798.1| thymidine kinase [Amsacta moorei entomopoxvirus 'L']
gi|125423|sp|P28852.1|KITH_AMEPV RecName: Full=Thymidine kinase
gi|9944539|gb|AAG02722.1|AF250284_16 AMV016 [Amsacta moorei entomopoxvirus 'L']
gi|221016|dbj|BAA01525.1| thymidine kinase [Amsacta moorei entomopoxvirus 'L']
gi|455125|gb|AAA42386.1| thymidine kinase [unidentified entomopoxvirus]
Length = 182
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 94/193 (48%), Gaps = 48/193 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
E+I+GPMFSGKTTEL+R+I RY +N +C+I+ + D+R+ + + HD L +
Sbjct: 4 ELIIGPMFSGKTTELMRKINRYILSNQKCVIITHNIDNRFINKNIINHDGNILNKEYLYI 63
Query: 212 ELNKLIPHTK---DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ N LI + D+IGIDE QF E E
Sbjct: 64 KTNNLINEINIVDNYDIIGIDECQFFE--------------------------------E 91
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
N D+ F + MAN K V+VA L+ F R FN I LIP E ++KL
Sbjct: 92 N------------DLEQFCDKMANNKKKVIVAGLNCDFNRNIFNSISKLIPKVEKIKKLQ 139
Query: 329 AVCMSCFRDAAFT 341
A+C C++DA+FT
Sbjct: 140 AICQFCYKDASFT 152
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTK---DID 74
R+I RY +N +C+I+ + D+R+ + + HD L ++ N LI + D
Sbjct: 20 RKINRYILSNQKCVIITHNIDNRFINKNIINHDGNILNKEYLYIKTNNLINEINIVDNYD 79
Query: 75 VIGIDEGQFFP--DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+IGIDE QFF D+ F + MAN K V+VA L+ F R FN I LIP E ++KL
Sbjct: 80 IIGIDECQFFEENDLEQFCDKMANNKKKVIVAGLNCDFNRNIFNSISKLIPKVEKIKKLQ 139
Query: 133 AVCMSCFRDAAFTKRIGQEKEVI 155
A+C C++DA+FT + + ++I
Sbjct: 140 AICQFCYKDASFTIKKHNKNQII 162
>gi|379731892|ref|YP_005324088.1| thymidine kinase [Saprospira grandis str. Lewin]
gi|378577503|gb|AFC26504.1| thymidine kinase [Saprospira grandis str. Lewin]
Length = 184
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEK--VATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R RRY+ A C++V+YAKD RYD + THD+ + A + +L +L +D DVI
Sbjct: 23 RYRRYRIAGKACLLVKYAKDCRYDDSAAMIVTHDKLRYEATACTKLAELDDLVQDYDVIC 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDE QF+PD FA+ AN GKIV L G ++R F I LIP + + + AVC S
Sbjct: 83 IDEIQFYPDAADFADRWANQGKIVECCGLSGDYKREPFEQISRLIPRCDDITHVKAVCKS 142
Query: 138 CFRDAAFTKRIGQEKE 153
DA F++R QE+E
Sbjct: 143 SGLDAPFSQRFSQEEE 158
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 93/202 (46%), Gaps = 48/202 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK--VSTHDQQKLTAVSA 210
+ILGPMFSGK+T L+ R RRY+ A C++V+YAKD RYD + THD+ + A +
Sbjct: 6 HLILGPMFSGKSTLLLTRYRRYRIAGKACLLVKYAKDCRYDDSAAMIVTHDKLRYEATAC 65
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L +L +D DVI IDE QF
Sbjct: 66 TKLAELDDLVQDYDVICIDEIQF------------------------------------- 88
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
P +F A+ AN GKIV L G ++R F I LIP + + + AV
Sbjct: 89 ---YPDAADF------ADRWANQGKIVECCGLSGDYKREPFEQISRLIPRCDDITHVKAV 139
Query: 331 CMSCFRDAAFTKRIGQEKEVRI 352
C S DA F++R QE+E +
Sbjct: 140 CKSSGLDAPFSQRFSQEEEQEV 161
>gi|462449|sp|Q05880.1|KITH_CFEPV RecName: Full=Thymidine kinase
gi|221130|dbj|BAA01527.1| thymidine kinase [Choristoneura fumiferana entomopoxvirus 'L']
Length = 185
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS-THDQQKLTAVSAV 211
E+I GPM+SGKTTELIRRI RY+ C+I+ ++ D+R+D + + HD K++ +
Sbjct: 4 EIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRHDDDNILINHDGFKISHDDFI 63
Query: 212 ELNKLIPHTKDID---VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ N LI K D +IGIDE QF +
Sbjct: 64 KTNILINKIKIFDKYEIIGIDECQFFDS-------------------------------- 91
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
D++ F +++AN GK ++VA L+ F + F I+ LIP++E + KL
Sbjct: 92 ------------NDLIIFCDTLANNGKKIIVAGLNSDFNKNPFKSIIKLIPISEKITKLQ 139
Query: 329 AVCMSCFRDAAFTKR 343
++C C+ DA FT +
Sbjct: 140 SICNFCYNDATFTMK 154
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 81/135 (60%), Gaps = 6/135 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVA-THDQQKLTAVSAVELNKLIPHTKDID--- 74
RRI RY+ C+I+ ++ D+R+D + + HD K++ ++ N LI K D
Sbjct: 20 RRITRYKLCKKNCVIISHSIDNRHDDDNILINHDGFKISHDDFIKTNILINKIKIFDKYE 79
Query: 75 VIGIDEGQFFP--DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+IGIDE QFF D++ F +++AN GK ++VA L+ F + F I+ LIP++E + KL
Sbjct: 80 IIGIDECQFFDSNDLIIFCDTLANNGKKIIVAGLNSDFNKNPFKSIIKLIPISEKITKLQ 139
Query: 133 AVCMSCFRDAAFTKR 147
++C C+ DA FT +
Sbjct: 140 SICNFCYNDATFTMK 154
>gi|424844011|ref|ZP_18268636.1| thymidine kinase [Saprospira grandis DSM 2844]
gi|395322209|gb|EJF55130.1| thymidine kinase [Saprospira grandis DSM 2844]
Length = 184
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEK--VATHDQQKLTAVSAVELNKLIPHTKDIDVIG 77
R RRY+ A C++V+YAKD RYD + THD+ + A + +L +L +D DVI
Sbjct: 23 RYRRYRIAGKACLLVKYAKDRRYDDSAAMIVTHDKLRYEATACTKLAELDDLVQDYDVIC 82
Query: 78 IDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
IDE QF+PD FA+ AN GKIV L G ++R F I LIP + + + AVC S
Sbjct: 83 IDEIQFYPDAADFADRWANQGKIVECCGLSGDYKREPFEQISRLIPRCDDITHVKAVCKS 142
Query: 138 CFRDAAFTKR--IGQEKEVILG 157
DA F++R + +E+EVI G
Sbjct: 143 SGLDAPFSQRFSLEEEQEVIGG 164
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 92/202 (45%), Gaps = 48/202 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK--VSTHDQQKLTAVSA 210
+ILGPMFSGK+T L+ R RRY+ A C++V+YAKD RYD + THD+ + A +
Sbjct: 6 HLILGPMFSGKSTLLLTRYRRYRIAGKACLLVKYAKDRRYDDSAAMIVTHDKLRYEATAC 65
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L +L +D DVI IDE QF
Sbjct: 66 TKLAELDDLVQDYDVICIDEIQF------------------------------------- 88
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
P +F A+ AN GKIV L G ++R F I LIP + + + AV
Sbjct: 89 ---YPDAADF------ADRWANQGKIVECCGLSGDYKREPFEQISRLIPRCDDITHVKAV 139
Query: 331 CMSCFRDAAFTKRIGQEKEVRI 352
C S DA F++R E+E +
Sbjct: 140 CKSSGLDAPFSQRFSLEEEQEV 161
>gi|308492862|ref|XP_003108621.1| CRE-THK-1 protein [Caenorhabditis remanei]
gi|308248361|gb|EFO92313.1| CRE-THK-1 protein [Caenorhabditis remanei]
Length = 269
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 99/205 (48%), Gaps = 54/205 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----VS 209
VILGPMFSGKTTEL+R R A C++V+YA D RYD + V+TH K+T V
Sbjct: 37 VILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATH--SKMTGQGRTVK 94
Query: 210 AVELNKLIPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
A L+++ + D+ V+ IDEGQF
Sbjct: 95 AHRLDEVSSQIFSDDVQVVSIDEGQF---------------------------------- 120
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+ E +A GK+V VAAL+GTF+R F I L+P A ++++
Sbjct: 121 ------------FDDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQV 168
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TAVC+ C A F+ R +K+V +
Sbjct: 169 TAVCVECGSQANFSFRSTLDKKVEV 193
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 8/138 (5%)
Query: 23 RYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA----VSAVELNKLIPH--TKDIDVI 76
R A C++V+YA D RYD + VATH K+T V A L+++ + D+ V+
Sbjct: 56 RQIIAKRTCVLVKYAGDTRYDADLVATH--SKMTGQGRTVKAHRLDEVSSQIFSDDVQVV 113
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDEGQFF D+ E +A GK+V VAAL+GTF+R F I L+P A ++++TAVC+
Sbjct: 114 SIDEGQFFDDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQVTAVCV 173
Query: 137 SCFRDAAFTKRIGQEKEV 154
C A F+ R +K+V
Sbjct: 174 ECGSQANFSFRSTLDKKV 191
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIK--RSPFKTLANEN 269
VEVIGG+D Y A+CRECY QK+ K KT ++N
Sbjct: 191 VEVIGGADTYTALCRECYVQKSEEKDAEEQLKTGCDKN 228
>gi|388507780|gb|AFK41956.1| unknown [Lotus japonicus]
Length = 279
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 90/207 (43%), Gaps = 50/207 (24%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT LIRRI+ I++ +KD RY + + THD KL +
Sbjct: 78 EIHVIVGPMFAGKTTSLIRRIQSESGNGRNVAIIKSSKDTRYGLDSIVTHDGTKLPCWAL 137
Query: 211 VELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
L+ + + +DVIGIDE QF D CRE
Sbjct: 138 ANLSSFKQKFGVDAYEQLDVIGIDEAQFF------DDLYDFCREAADHD----------- 180
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
GK VVVA LDG + R F +L +IPLA+ V
Sbjct: 181 ----------------------------GKTVVVAGLDGNYLRRNFGSVLDIIPLADSVT 212
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R QE +V +
Sbjct: 213 KLTARCEICGKHAFFTLRKTQETQVEL 239
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDI 73
RRI+ I++ +KD RY + + THD KL + L+ + + +
Sbjct: 96 RRIQSESGNGRNVAIIKSSKDTRYGLDSIVTHDGTKLPCWALANLSSFKQKFGVDAYEQL 155
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK VVVA LDG + R F +L +IPLA+ V KLT
Sbjct: 156 DVIGIDEAQFFDDLYDFCREAADHDGKTVVVAGLDGNYLRRNFGSVLDIIPLADSVTKLT 215
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C + A FT R QE +V L
Sbjct: 216 ARCEICGKHAFFTLRKTQETQVEL 239
>gi|268552841|ref|XP_002634403.1| C. briggsae CBR-THK-1 protein [Caenorhabditis briggsae]
Length = 262
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 98/205 (47%), Gaps = 54/205 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----VS 209
VILGPMFSGKTTEL+R R A C++V+YA D RYD + V+TH K+T V
Sbjct: 28 VILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATH--SKMTGQGRTVK 85
Query: 210 AVELNKLIPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
A L ++ + D+ V+ IDEGQF
Sbjct: 86 AHRLAEVASQIFSDDVQVVSIDEGQF---------------------------------- 111
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+ E +A GK+V VAAL+GTF+R F I L+P A ++++
Sbjct: 112 ------------FEDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQV 159
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TAVC+ C A F+ R +K+V +
Sbjct: 160 TAVCVECGAQANFSFRSTLDKKVEV 184
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 23 RYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA----VSAVELNKLIPH--TKDIDVI 76
R A C++V+YA D RYD + VATH K+T V A L ++ + D+ V+
Sbjct: 47 RQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQGRTVKAHRLAEVASQIFSDDVQVV 104
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDEGQFF D+ E +A GK+V VAAL+GTF+R F I L+P A ++++TAVC+
Sbjct: 105 SIDEGQFFEDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQVTAVCV 164
Query: 137 SCFRDAAFTKRIGQEKEV 154
C A F+ R +K+V
Sbjct: 165 ECGAQANFSFRSTLDKKV 182
>gi|9759365|dbj|BAB09824.1| unnamed protein product [Arabidopsis thaliana]
Length = 277
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 93/209 (44%), Gaps = 53/209 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E V++GPMFSGKTT L+RRI + R I++ KD RY TE + THD +K S
Sbjct: 73 EIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRYCTESIVTHDGEKYPCWSL 132
Query: 211 VELNKLIP------HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+L+ + +DVIGIDE QF
Sbjct: 133 PDLSSFKERFGFDDYENRLDVIGIDEAQF------------------------------- 161
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
F D+ F A+ GK V+VA LDG F R F +L LIP+A+
Sbjct: 162 ---------------FGDLYEFCREAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADT 206
Query: 324 VEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
V KLT+ C C + A FT R +EKE +
Sbjct: 207 VTKLTSRCEVCGKRALFTMRKTEEKETEL 235
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIP------HTKD 72
RRI + R I++ KD RY TE + THD +K S +L+ +
Sbjct: 91 RRILAERETGKRIAIIKSNKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENR 150
Query: 73 IDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+DVIGIDE QFF D+ F A+ GK V+VA LDG F R F +L LIP+A+ V KL
Sbjct: 151 LDVIGIDEAQFFGDLYEFCREAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKL 210
Query: 132 TAVCMSCFRDAAFTKRIGQEKEVIL 156
T+ C C + A FT R +EKE L
Sbjct: 211 TSRCEVCGKRALFTMRKTEEKETEL 235
>gi|18420635|ref|NP_568426.1| Thymidine kinase [Arabidopsis thaliana]
gi|332005732|gb|AED93115.1| Thymidine kinase [Arabidopsis thaliana]
Length = 282
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 93/209 (44%), Gaps = 53/209 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E V++GPMFSGKTT L+RRI + R I++ KD RY TE + THD +K S
Sbjct: 78 EIHVVVGPMFSGKTTTLLRRILAERETGKRIAIIKSNKDTRYCTESIVTHDGEKYPCWSL 137
Query: 211 VELNKLIP------HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+L+ + +DVIGIDE QF
Sbjct: 138 PDLSSFKERFGFDDYENRLDVIGIDEAQF------------------------------- 166
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
F D+ F A+ GK V+VA LDG F R F +L LIP+A+
Sbjct: 167 ---------------FGDLYEFCREAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADT 211
Query: 324 VEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
V KLT+ C C + A FT R +EKE +
Sbjct: 212 VTKLTSRCEVCGKRALFTMRKTEEKETEL 240
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIP------HTKD 72
RRI + R I++ KD RY TE + THD +K S +L+ +
Sbjct: 96 RRILAERETGKRIAIIKSNKDTRYCTESIVTHDGEKYPCWSLPDLSSFKERFGFDDYENR 155
Query: 73 IDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+DVIGIDE QFF D+ F A+ GK V+VA LDG F R F +L LIP+A+ V KL
Sbjct: 156 LDVIGIDEAQFFGDLYEFCREAADKEGKTVIVAGLDGDFMRRRFGSVLDLIPIADTVTKL 215
Query: 132 TAVCMSCFRDAAFTKRIGQEKEVIL 156
T+ C C + A FT R +EKE L
Sbjct: 216 TSRCEVCGKRALFTMRKTEEKETEL 240
>gi|49532984|dbj|BAD26593.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 121
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 26 YANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFF 84
Y+ RC+ V++A D RY E KVA H A+SA L +++ ++ D + +DEGQFF
Sbjct: 1 YSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAGYLYEVMQRLEEYDAVAVDEGQFF 60
Query: 85 PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDAA 143
PD+ + AG+ V+VAALDG F + F + +L+P+A+ ++KLTAVCM C RDA
Sbjct: 61 PDLYEGVVQLLTAGRYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCMKCKMRDAP 120
Query: 144 F 144
F
Sbjct: 121 F 121
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 48/167 (28%)
Query: 176 YANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFV 234
Y+ RC+ V++A D RY E KV+ H A+SA L +++ ++ D + +DEGQF
Sbjct: 1 YSGRRCIAVKHAIDQRYTEESKVAMHSGATYPAISAGYLYEVMQRLEEYDAVAVDEGQF- 59
Query: 235 EVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAG 294
FPD+ + AG
Sbjct: 60 ---------------------------------------------FPDLYEGVVQLLTAG 74
Query: 295 KIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDAAF 340
+ V+VAALDG F + F + +L+P+A+ ++KLTAVCM C RDA F
Sbjct: 75 RYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCMKCKMRDAPF 121
>gi|297808299|ref|XP_002872033.1| hypothetical protein ARALYDRAFT_910314 [Arabidopsis lyrata subsp.
lyrata]
gi|297317870|gb|EFH48292.1| hypothetical protein ARALYDRAFT_910314 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 94/209 (44%), Gaps = 53/209 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E V++GPMFSGKTT L+RRI + + I++ KD RY TE + THD +K S
Sbjct: 76 EIHVVVGPMFSGKTTTLLRRILAEKETGKQIAIIKSNKDTRYCTESIVTHDGEKFPCWSL 135
Query: 211 VELNKLI------PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+L+ + +DVIGIDE QF
Sbjct: 136 PDLSSFKERFGFDEYENRLDVIGIDEAQF------------------------------- 164
Query: 265 LANENAALNVPPPPEFPDVVSFAESMAN-AGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
F D+ F A+ GK V+VA LDG F+R F +L LIP+A+
Sbjct: 165 ---------------FGDLYEFCRQAADREGKTVIVAGLDGDFKRRRFGSVLDLIPIADT 209
Query: 324 VEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
V KLT+ C C + A FT R +EKE +
Sbjct: 210 VTKLTSRCEVCGKRALFTMRKTEEKETEL 238
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIP------HTKD 72
RRI + + I++ KD RY TE + THD +K S +L+ +
Sbjct: 94 RRILAEKETGKQIAIIKSNKDTRYCTESIVTHDGEKFPCWSLPDLSSFKERFGFDEYENR 153
Query: 73 IDVIGIDEGQFFPDVVSFAESMAN-AGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+DVIGIDE QFF D+ F A+ GK V+VA LDG F+R F +L LIP+A+ V KL
Sbjct: 154 LDVIGIDEAQFFGDLYEFCRQAADREGKTVIVAGLDGDFKRRRFGSVLDLIPIADTVTKL 213
Query: 132 TAVCMSCFRDAAFTKRIGQEKEVIL 156
T+ C C + A FT R +EKE L
Sbjct: 214 TSRCEVCGKRALFTMRKTEEKETEL 238
>gi|125457|sp|P27158.1|KITH_RAT RecName: Full=Thymidine kinase, cytosolic
gi|207330|gb|AAA75560.1| thymidine kinase, partial [Rattus norvegicus]
Length = 121
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 75/147 (51%), Gaps = 47/147 (31%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY + STHD+ + A+ A
Sbjct: 22 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L + + VIGIDEGQF
Sbjct: 81 LKDVAQEALGVAVIGIDEGQF--------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVV 299
FPD+V F E+MAN GK V+V
Sbjct: 102 -------FPDIVDFCETMANTGKTVIV 121
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + +THD+ + A+ A L + + VIGI
Sbjct: 38 RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLKDVAQEALGVAVIGI 96
Query: 79 DEGQFFPDVVSFAESMANAGKIVVV 103
DEGQFFPD+V F E+MAN GK V+V
Sbjct: 97 DEGQFFPDIVDFCETMANTGKTVIV 121
>gi|167830254|emb|CAM34547.1| putative thymidine kinase 1 [Zea mays]
gi|194703294|gb|ACF85731.1| unknown [Zea mays]
gi|194704256|gb|ACF86212.1| unknown [Zea mays]
gi|414867387|tpg|DAA45944.1| TPA: chloroplast thymidine kinase [Zea mays]
Length = 279
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 97/218 (44%), Gaps = 52/218 (23%)
Query: 142 AAFTKRIGQEKE--VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVST 199
AA R Q E VI+GPMF+GKTT L+RR++ +++ KD+RY + V T
Sbjct: 65 AAMEVRAAQSGEIHVIVGPMFAGKTTALLRRVQAEAGNGRSVALIKSDKDNRYGLDSVVT 124
Query: 200 HDQQKLTAVSAVELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQK 254
HD K+ + EL+ I +DVIGIDE QF + D Y C+ +
Sbjct: 125 HDGTKMACWALSELSSFHDKLGIEAYNKVDVIGIDEAQFFD-----DLYDFCCKAADRD- 178
Query: 255 APIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDI 314
GKIVVVA LDG ++R F I
Sbjct: 179 ---------------------------------------GKIVVVAGLDGDYKRRKFGSI 199
Query: 315 LSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
L ++PLA+ V KLTA C C R A FT R QE + +
Sbjct: 200 LDIVPLADSVTKLTARCELCGRRAFFTLRKTQETKTEL 237
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTK 71
RR++ +++ KD+RY + V THD K+ + EL+ I
Sbjct: 92 LLRRVQAEAGNGRSVALIKSDKDNRYGLDSVVTHDGTKMACWALSELSSFHDKLGIEAYN 151
Query: 72 DIDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+DVIGIDE QFF D+ F A+ GKIVVVA LDG ++R F IL ++PLA+ V K
Sbjct: 152 KVDVIGIDEAQFFDDLYDFCCKAADRDGKIVVVAGLDGDYKRRKFGSILDIVPLADSVTK 211
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVIL 156
LTA C C R A FT R QE + L
Sbjct: 212 LTARCELCGRRAFFTLRKTQETKTEL 237
>gi|341903201|gb|EGT59136.1| hypothetical protein CAEBREN_26149 [Caenorhabditis brenneri]
gi|341903933|gb|EGT59868.1| CBN-THK-1 protein [Caenorhabditis brenneri]
Length = 262
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 97/205 (47%), Gaps = 54/205 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----VS 209
VILGPMFSGKTTEL+R R A C++V+YA D RYD + V+TH K+T V
Sbjct: 28 VILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQGRTVK 85
Query: 210 AVELNKLIPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
A L ++ D+ V+ IDEGQF
Sbjct: 86 AHRLAEVSSQIFCDDVQVVSIDEGQF---------------------------------- 111
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+ E +A GK+V VAAL+GTF+R F I L+P A ++++
Sbjct: 112 ------------FEDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQV 159
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TAVC+ C A F+ R +K+V +
Sbjct: 160 TAVCVECGAQANFSFRSTLDKKVEV 184
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Query: 23 RYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA----VSAVELNKLIPH--TKDIDVI 76
R A C++V+YA D RYD + VATH K+T V A L ++ D+ V+
Sbjct: 47 RQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQGRTVKAHRLAEVSSQIFCDDVQVV 104
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDEGQFF D+ E +A GK+V VAAL+GTF+R F I L+P A ++++TAVC+
Sbjct: 105 SIDEGQFFEDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQVTAVCV 164
Query: 137 SCFRDAAFTKRIGQEKEV 154
C A F+ R +K+V
Sbjct: 165 ECGAQANFSFRSTLDKKV 182
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIK--RSPFKTLANEN 269
VEVIGGS+ Y A+CRECY QK+ K KT ++N
Sbjct: 182 VEVIGGSESYTALCRECYVQKSEEKDAEEQLKTGCDKN 219
>gi|392900416|ref|NP_001255477.1| Protein THK-1, isoform a [Caenorhabditis elegans]
gi|3880891|emb|CAA19501.1| Protein THK-1, isoform a [Caenorhabditis elegans]
gi|41021060|gb|AAR98639.1| thyymidine kinase (29.6 kD) (thk-1) [Caenorhabditis elegans]
Length = 269
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 98/205 (47%), Gaps = 54/205 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----VS 209
VILGPMFSGKTTEL+R R A C++V+YA D RYD + V+TH K+T V
Sbjct: 37 VILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQGRTVK 94
Query: 210 AVELNKLIPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
A L+++ ++ V+ IDEGQF
Sbjct: 95 AHRLSEVQSQIFNDEVQVVSIDEGQF---------------------------------- 120
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+ E +A GK+V VAAL+GTF+R F I L+P A ++++
Sbjct: 121 ------------FEDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQV 168
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TAVC+ C A F+ R +K+V +
Sbjct: 169 TAVCVECGSQANFSFRSTLDKKVEV 193
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 23 RYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA----VSAVELNKLIPH--TKDIDVI 76
R A C++V+YA D RYD + VATH K+T V A L+++ ++ V+
Sbjct: 56 RQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQGRTVKAHRLSEVQSQIFNDEVQVV 113
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDEGQFF D+ E +A GK+V VAAL+GTF+R F I L+P A ++++TAVC+
Sbjct: 114 SIDEGQFFEDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQVTAVCV 173
Query: 137 SCFRDAAFTKRIGQEKEV 154
C A F+ R +K+V
Sbjct: 174 ECGSQANFSFRSTLDKKV 191
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 20/25 (80%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIK 258
VEVIGGSD Y A+CRECY QK+ K
Sbjct: 191 VEVIGGSDTYTALCRECYVQKSEEK 215
>gi|462448|sp|Q05879.1|KITH_CBEPV RecName: Full=Thymidine kinase
gi|221127|dbj|BAA01526.1| thymidine kinase [Choristoneura biennis entomopoxvirus 'L']
Length = 186
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY--DTEKVSTHDQQKLTAVSA 210
E+I GPM+SGKTTELIRRI RY+ C+I+ ++ D+R D + HD K++
Sbjct: 4 EIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRCEEDDNILINHDGFKISHDDF 63
Query: 211 VELNKLIPHTKDID---VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
++ N LI K D +IGIDE QF +
Sbjct: 64 IKTNILINKIKIFDKYEIIGIDECQFFDS------------------------------- 92
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
D++ F +++AN GK ++VA L+ F + F I+ LIP++E + KL
Sbjct: 93 -------------NDLMIFCDTLANNGKKIIVAGLNSDFNKNPFKSIIKLIPISEKITKL 139
Query: 328 TAVCMSCFRDAAFTKR 343
++C C+ DA FT +
Sbjct: 140 QSICNFCYNDATFTMK 155
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY--DTEKVATHDQQKLTAVSAVELNKLIPHTKDID-- 74
RRI RY+ C+I+ ++ D+R D + HD K++ ++ N LI K D
Sbjct: 20 RRITRYKLCKKNCVIISHSIDNRCEEDDNILINHDGFKISHDDFIKTNILINKIKIFDKY 79
Query: 75 -VIGIDEGQFFP--DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+IGIDE QFF D++ F +++AN GK ++VA L+ F + F I+ LIP++E + KL
Sbjct: 80 EIIGIDECQFFDSNDLMIFCDTLANNGKKIIVAGLNSDFNKNPFKSIIKLIPISEKITKL 139
Query: 132 TAVCMSCFRDAAFTKR 147
++C C+ DA FT +
Sbjct: 140 QSICNFCYNDATFTMK 155
>gi|392900418|ref|NP_001255478.1| Protein THK-1, isoform b [Caenorhabditis elegans]
gi|332078251|emb|CCA65650.1| Protein THK-1, isoform b [Caenorhabditis elegans]
Length = 260
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 98/205 (47%), Gaps = 54/205 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----VS 209
VILGPMFSGKTTEL+R R A C++V+YA D RYD + V+TH K+T V
Sbjct: 28 VILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYAGDTRYDADLVATHS--KMTGQGRTVK 85
Query: 210 AVELNKLIPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
A L+++ ++ V+ IDEGQF
Sbjct: 86 AHRLSEVQSQIFNDEVQVVSIDEGQF---------------------------------- 111
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D+ E +A GK+V VAAL+GTF+R F I L+P A ++++
Sbjct: 112 ------------FEDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQV 159
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVRI 352
TAVC+ C A F+ R +K+V +
Sbjct: 160 TAVCVECGSQANFSFRSTLDKKVEV 184
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 8/134 (5%)
Query: 27 ANYRCMIVRYAKDDRYDTEKVATHDQQKLTA----VSAVELNKLIPH--TKDIDVIGIDE 80
A C++V+YA D RYD + VATH K+T V A L+++ ++ V+ IDE
Sbjct: 51 AKRTCVLVKYAGDTRYDADLVATHS--KMTGQGRTVKAHRLSEVQSQIFNDEVQVVSIDE 108
Query: 81 GQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFR 140
GQFF D+ E +A GK+V VAAL+GTF+R F I L+P A ++++TAVC+ C
Sbjct: 109 GQFFEDLAETCEELAQRGKVVCVAALNGTFERKPFPQISLLLPYANEIKQVTAVCVECGS 168
Query: 141 DAAFTKRIGQEKEV 154
A F+ R +K+V
Sbjct: 169 QANFSFRSTLDKKV 182
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 20/25 (80%)
Query: 234 VEVIGGSDKYMAVCRECYKQKAPIK 258
VEVIGGSD Y A+CRECY QK+ K
Sbjct: 182 VEVIGGSDTYTALCRECYVQKSEEK 206
>gi|195635845|gb|ACG37391.1| thymidine kinase [Zea mays]
Length = 281
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 97/218 (44%), Gaps = 52/218 (23%)
Query: 142 AAFTKRIGQEKE--VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVST 199
AA R Q E VI+GPMF+GKTT L+RR++ +++ KD+RY + V T
Sbjct: 67 AAMEVRAAQSGEIHVIVGPMFAGKTTALLRRVQAEAGNGRSVALIKSDKDNRYGLDSVVT 126
Query: 200 HDQQKLTAVSAVELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQK 254
HD K+ + EL+ I +DVIGIDE QF + D Y C+ +
Sbjct: 127 HDGTKMACWALSELSSFHDKLGIDAYNKVDVIGIDEAQFFD-----DLYDFCCKAADRD- 180
Query: 255 APIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDI 314
GKIVVVA LDG ++R F I
Sbjct: 181 ---------------------------------------GKIVVVAGLDGDYKRRKFGSI 201
Query: 315 LSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
L ++PLA+ V KLTA C C R A FT R QE + +
Sbjct: 202 LDIVPLADSVTKLTARCELCGRRAFFTLRKTQETKTEL 239
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 81/145 (55%), Gaps = 9/145 (6%)
Query: 21 IRRYQY--ANYRCM-IVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKD 72
+RR Q N R + +++ KD+RY + V THD K+ + EL+ I
Sbjct: 95 LRRVQAEAGNGRSVALIKSDKDNRYGLDSVVTHDGTKMACWALSELSSFHDKLGIDAYNK 154
Query: 73 IDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+DVIGIDE QFF D+ F A+ GKIVVVA LDG ++R F IL ++PLA+ V KL
Sbjct: 155 VDVIGIDEAQFFDDLYDFCCKAADRDGKIVVVAGLDGDYKRRKFGSILDIVPLADSVTKL 214
Query: 132 TAVCMSCFRDAAFTKRIGQEKEVIL 156
TA C C R A FT R QE + L
Sbjct: 215 TARCELCGRRAFFTLRKTQETKTEL 239
>gi|356557967|ref|XP_003547281.1| PREDICTED: thymidine kinase-like [Glycine max]
Length = 279
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 93/208 (44%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+RRI+ I++ +KD RY + + THD KL +
Sbjct: 78 EIHVIVGPMFAGKTTSLLRRIQSETANGRNVAIIKSSKDTRYGLDSIVTHDGAKLPCWAL 137
Query: 211 VELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
L+ + + +DVIGIDE QF
Sbjct: 138 ANLSSFKQKFGMDAYEKLDVIGIDEAQF-------------------------------- 165
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 166 --------------FDDLYEFCRQAADHDGKTVIVAGLDGNYLRRSFGSVLDIIPLADSV 211
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R Q+K++ +
Sbjct: 212 TKLTARCEICGKRACFTLRKTQDKQIEL 239
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDI 73
RRI+ I++ +KD RY + + THD KL + L+ + + +
Sbjct: 96 RRIQSETANGRNVAIIKSSKDTRYGLDSIVTHDGAKLPCWALANLSSFKQKFGMDAYEKL 155
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLA+ V KLT
Sbjct: 156 DVIGIDEAQFFDDLYEFCRQAADHDGKTVIVAGLDGNYLRRSFGSVLDIIPLADSVTKLT 215
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C + A FT R Q+K++ L
Sbjct: 216 ARCEICGKRACFTLRKTQDKQIEL 239
>gi|242035325|ref|XP_002465057.1| hypothetical protein SORBIDRAFT_01g031430 [Sorghum bicolor]
gi|241918911|gb|EER92055.1| hypothetical protein SORBIDRAFT_01g031430 [Sorghum bicolor]
Length = 284
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 97/218 (44%), Gaps = 52/218 (23%)
Query: 142 AAFTKRIGQEKE--VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVST 199
AA R Q E VI+GPMF+GKTT L+RR++ +++ KD+RY + V T
Sbjct: 70 AAVEARAAQSGEIHVIVGPMFAGKTTALLRRVQAEAGNGRSVALIKSDKDNRYGLDSVVT 129
Query: 200 HDQQKLTAVSAVELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQK 254
HD K+ + EL+ I ++DVIGIDE QF + D Y C+ +
Sbjct: 130 HDGTKMACWALSELSSFHEKLGIEAYNEVDVIGIDEAQFFD-----DLYDFCCKAADRD- 183
Query: 255 APIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDI 314
GKIVVVA LDG ++R F +
Sbjct: 184 ---------------------------------------GKIVVVAGLDGDYKRKKFGSV 204
Query: 315 LSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
L ++PLA+ V KLTA C C A FT R QE + +
Sbjct: 205 LDIVPLADSVTKLTARCELCGHRAFFTLRKTQETKTEL 242
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTK 71
RR++ +++ KD+RY + V THD K+ + EL+ I
Sbjct: 97 LLRRVQAEAGNGRSVALIKSDKDNRYGLDSVVTHDGTKMACWALSELSSFHEKLGIEAYN 156
Query: 72 DIDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
++DVIGIDE QFF D+ F A+ GKIVVVA LDG ++R F +L ++PLA+ V K
Sbjct: 157 EVDVIGIDEAQFFDDLYDFCCKAADRDGKIVVVAGLDGDYKRKKFGSVLDIVPLADSVTK 216
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVIL 156
LTA C C A FT R QE + L
Sbjct: 217 LTARCELCGHRAFFTLRKTQETKTEL 242
>gi|289577386|ref|YP_003476013.1| thymidine kinase [Thermoanaerobacter italicus Ab9]
gi|289527099|gb|ADD01451.1| Thymidine kinase [Thermoanaerobacter italicus Ab9]
Length = 193
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPMFSGK+ ELIRRI+R Q A + + + A DDRY +KV +H+ + A+S V+
Sbjct: 12 EVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAISVVK 71
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++I H + DI+VI IDE QF + +
Sbjct: 72 ASEIIEHLEHDIEVIAIDEIQFFDHL---------------------------------- 97
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+C
Sbjct: 98 -----------LVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDVMAIAESVDKLTAIC 146
Query: 332 MSCFRDAAFTKRIGQEKEVR 351
+ C A T+R+ K R
Sbjct: 147 VKCGNPATRTQRLINGKPAR 166
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDV 75
RRI+R Q A + + + A DDRY +KV +H+ + A+S V+ +++I H + DI+V
Sbjct: 26 LIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAISVVKASEIIEHLEHDIEV 85
Query: 76 IGIDEGQFFPDV-VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF + V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+
Sbjct: 86 IAIDEIQFFDHLLVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDVMAIAESVDKLTAI 145
Query: 135 CMSCFRDAAFTKRI 148
C+ C A T+R+
Sbjct: 146 CVKCGNPATRTQRL 159
>gi|356532644|ref|XP_003534881.1| PREDICTED: thymidine kinase-like [Glycine max]
Length = 276
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 93/208 (44%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+RRI+ I++ +KD RY + + THD +L +
Sbjct: 75 EIHVIVGPMFAGKTTSLLRRIQSETTNGRNVAIIKSSKDTRYGLDSIVTHDGAELPCWAL 134
Query: 211 VELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
L+ I + +DVIGIDE QF
Sbjct: 135 ENLSSFKQKFGIDAYEKLDVIGIDEAQF-------------------------------- 162
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 163 --------------FDDLYEFCLQAADHDGKTVIVAGLDGNYLRRSFGSVLDIIPLADSV 208
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R Q+K++ +
Sbjct: 209 TKLTARCEICGKRACFTLRKTQDKQIEL 236
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDI 73
RRI+ I++ +KD RY + + THD +L + L+ I + +
Sbjct: 93 RRIQSETTNGRNVAIIKSSKDTRYGLDSIVTHDGAELPCWALENLSSFKQKFGIDAYEKL 152
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLA+ V KLT
Sbjct: 153 DVIGIDEAQFFDDLYEFCLQAADHDGKTVIVAGLDGNYLRRSFGSVLDIIPLADSVTKLT 212
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C + A FT R Q+K++ L
Sbjct: 213 ARCEICGKRACFTLRKTQDKQIEL 236
>gi|426346633|ref|XP_004040976.1| PREDICTED: thymidine kinase, cytosolic [Gorilla gorilla gorilla]
Length = 176
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 128 VEKLTAVCMSCFR-----DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCM 182
V +L MSC + +K GQ +VILGPMFSGK+TEL+RR+RR+Q A Y+C+
Sbjct: 35 VRELPGGAMSCINLPTVLPGSPSKTRGQ-IQVILGPMFSGKSTELMRRVRRFQIAQYKCL 93
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVI 237
+++YAKD RY + THD+ + A+ A L + + VIGIDEGQFV +
Sbjct: 94 VIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGIDEGQFVSWL 147
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR+Q A Y+C++++YAKD RY + THD+ + A+ A L + + VIGI
Sbjct: 80 RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 138
Query: 79 DEGQFFPDVV 88
DEGQF +V
Sbjct: 139 DEGQFVSWLV 148
>gi|297543673|ref|YP_003675975.1| Thymidine kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841448|gb|ADH59964.1| Thymidine kinase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 193
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPMFSGK+ ELIRRI+R Q A + + + A D+RY +KV +H+ + A+S V+
Sbjct: 12 EVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDNRYSIDKVVSHNGTNINAISVVK 71
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++I H +D DVI IDE QF + +
Sbjct: 72 ASEIIEHLEEDTDVIAIDEIQFFDHL---------------------------------- 97
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+C
Sbjct: 98 -----------LVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDVMAIAESVDKLTAIC 146
Query: 332 MSCFRDAAFTKRIGQEKEVR 351
+ C A T+R+ K R
Sbjct: 147 VKCGNPATRTQRLINGKPAR 166
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDV 75
RRI+R Q A + + + A D+RY +KV +H+ + A+S V+ +++I H + D DV
Sbjct: 26 LIRRIKRAQIAKQKVQVFKPAIDNRYSIDKVVSHNGTNINAISVVKASEIIEHLEEDTDV 85
Query: 76 IGIDEGQFFPDV-VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF + V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+
Sbjct: 86 IAIDEIQFFDHLLVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDVMAIAESVDKLTAI 145
Query: 135 CMSCFRDAAFTKRI 148
C+ C A T+R+
Sbjct: 146 CVKCGNPATRTQRL 159
>gi|27476082|gb|AAO17013.1| Putative thymidine kinase [Oryza sativa Japonica Group]
gi|125584671|gb|EAZ25335.1| hypothetical protein OsJ_09147 [Oryza sativa Japonica Group]
Length = 270
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 95/208 (45%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+RR++ +++ KD+RY + V THD K+ +
Sbjct: 68 EIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKMPCWAL 127
Query: 211 VEL----NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
EL +KL D +DVIGIDE QF
Sbjct: 128 PELSSFQDKLGTEAYDKVDVIGIDEAQF-------------------------------- 155
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V
Sbjct: 156 --------------FDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSV 201
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C R A FT R +E + +
Sbjct: 202 TKLTARCELCGRRAFFTLRKTRETKTEL 229
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHTKD 72
RR++ +++ KD+RY + V THD K+ + EL +KL D
Sbjct: 84 LLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYD 143
Query: 73 -IDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+DVIGIDE QFF D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V K
Sbjct: 144 KVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTK 203
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVIL 156
LTA C C R A FT R +E + L
Sbjct: 204 LTARCELCGRRAFFTLRKTRETKTEL 229
>gi|125542117|gb|EAY88256.1| hypothetical protein OsI_09708 [Oryza sativa Indica Group]
Length = 271
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 95/208 (45%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+RR++ +++ KD+RY + V THD K+ +
Sbjct: 69 EIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKMPCWAL 128
Query: 211 VEL----NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
EL +KL D +DVIGIDE QF
Sbjct: 129 PELSSFQDKLGTEAYDKVDVIGIDEAQF-------------------------------- 156
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V
Sbjct: 157 --------------FDDLHEFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSV 202
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C R A FT R +E + +
Sbjct: 203 TKLTARCELCGRRAFFTLRKTRETKTEL 230
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHTKD 72
RR++ +++ KD+RY + V THD K+ + EL +KL D
Sbjct: 85 LLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYD 144
Query: 73 -IDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+DVIGIDE QFF D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V K
Sbjct: 145 KVDVIGIDEAQFFDDLHEFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTK 204
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVIL 156
LTA C C R A FT R +E + L
Sbjct: 205 LTARCELCGRRAFFTLRKTRETKTEL 230
>gi|115450267|ref|NP_001048734.1| Os03g0113100 [Oryza sativa Japonica Group]
gi|108705823|gb|ABF93618.1| Thymidine kinase, putative, expressed [Oryza sativa Japonica Group]
gi|113547205|dbj|BAF10648.1| Os03g0113100 [Oryza sativa Japonica Group]
gi|215697091|dbj|BAG91085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 276
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 95/208 (45%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+RR++ +++ KD+RY + V THD K+ +
Sbjct: 74 EIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKMPCWAL 133
Query: 211 VEL----NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
EL +KL D +DVIGIDE QF
Sbjct: 134 PELSSFQDKLGTEAYDKVDVIGIDEAQF-------------------------------- 161
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V
Sbjct: 162 --------------FDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSV 207
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C R A FT R +E + +
Sbjct: 208 TKLTARCELCGRRAFFTLRKTRETKTEL 235
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHTKD 72
RR++ +++ KD+RY + V THD K+ + EL +KL D
Sbjct: 90 LLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYD 149
Query: 73 -IDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+DVIGIDE QFF D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V K
Sbjct: 150 KVDVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTK 209
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVIL 156
LTA C C R A FT R +E + L
Sbjct: 210 LTARCELCGRRAFFTLRKTRETKTEL 235
>gi|449444618|ref|XP_004140071.1| PREDICTED: thymidine kinase-like [Cucumis sativus]
Length = 233
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 52/214 (24%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
+ R+ E VI+GPMF+GKTT L+RRI+ + ++++ +KD RY + V THD K
Sbjct: 23 SHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVK 82
Query: 205 LTAVSAVELNKLIPH-----TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
+ +L+ ++DVIG+DE QF
Sbjct: 83 FPCWALPDLSSFRQKFGEDAYNELDVIGVDEAQF-------------------------- 116
Query: 260 SPFKTLANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLI 318
F D+ F ++A+ GKI+VVA LDG + R F +L ++
Sbjct: 117 --------------------FDDLYDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVV 156
Query: 319 PLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
PLA+ V KLTA C C + A FT R +E + +
Sbjct: 157 PLADTVTKLTARCELCGKRAFFTLRKTEETKTEL 190
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-----TKDI 73
RRI+ + ++++ +KD RY + V THD K + +L+ ++
Sbjct: 47 RRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYNEL 106
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIG+DE QFF D+ F ++A+ GKI+VVA LDG + R F +L ++PLA+ V KLT
Sbjct: 107 DVIGVDEAQFFDDLYDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLT 166
Query: 133 AVCMSCFRDAAFTKRIGQE--KEVILG 157
A C C + A FT R +E E+I G
Sbjct: 167 ARCELCGKRAFFTLRKTEETKTELIAG 193
>gi|3411152|gb|AAC31168.1| thymidine kinase [Oryza sativa Japonica Group]
Length = 212
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 95/208 (45%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+RR++ +++ KD+RY + V THD K+ +
Sbjct: 10 EIHVIVGPMFAGKTTALLRRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKMPCWAL 69
Query: 211 VEL----NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
EL +KL D +DVIGIDE QF
Sbjct: 70 PELSSFQDKLGTEAYDKVDVIGIDEAQF-------------------------------- 97
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V
Sbjct: 98 --------------FDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSV 143
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C R A FT R +E + +
Sbjct: 144 TKLTARCELCGRRAFFTLRKTRETKTEL 171
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHTKD-I 73
RR++ +++ KD+RY + V THD K+ + EL +KL D +
Sbjct: 28 RRVQVEAGTGRNVALIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKV 87
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V KLT
Sbjct: 88 DVIGIDEAQFFDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLT 147
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C R A FT R +E + L
Sbjct: 148 ARCELCGRRAFFTLRKTRETKTEL 171
>gi|449505149|ref|XP_004162390.1| PREDICTED: thymidine kinase-like [Cucumis sativus]
Length = 235
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 52/214 (24%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
+ R+ E VI+GPMF+GKTT L+RRI+ + ++++ +KD RY + V THD K
Sbjct: 23 SHRLAGEVHVIIGPMFAGKTTALLRRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVK 82
Query: 205 LTAVSAVELNKLIPH-----TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
+ +L+ ++DVIG+DE QF
Sbjct: 83 FPCWALPDLSSFRQKFGEDAYNELDVIGVDEAQF-------------------------- 116
Query: 260 SPFKTLANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLI 318
F D+ F ++A+ GKI+VVA LDG + R F +L ++
Sbjct: 117 --------------------FDDLYDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVV 156
Query: 319 PLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
PLA+ V KLTA C C + A FT R +E + +
Sbjct: 157 PLADTVTKLTARCELCGKRAFFTLRKTEETKTEL 190
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-----TKDI 73
RRI+ + ++++ +KD RY + V THD K + +L+ ++
Sbjct: 47 RRIKSESNSGRNVVMIKSSKDTRYAIDSVVTHDGVKFPCWALPDLSSFRQKFGEDAYNEL 106
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIG+DE QFF D+ F ++A+ GKI+VVA LDG + R F +L ++PLA+ V KLT
Sbjct: 107 DVIGVDEAQFFDDLYDFCCNVADRDGKIIVVAGLDGDYLRRSFGSVLDVVPLADTVTKLT 166
Query: 133 AVCMSCFRDAAFTKRIGQE--KEVILG 157
A C C + A FT R +E E+I G
Sbjct: 167 ARCELCGKRAFFTLRKTEETKTELIAG 193
>gi|359497110|ref|XP_002266298.2| PREDICTED: thymidine kinase-like [Vitis vinifera]
Length = 283
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 93/208 (44%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMFSGKTT L+RRI+ + I++ KD RY + + THD KL +
Sbjct: 82 EIHVIVGPMFSGKTTTLLRRIQSETSNGRKVAIIKSNKDTRYGLDSIVTHDGVKLPCWAL 141
Query: 211 VELN----KLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L+ KL D +DVIGIDE QF
Sbjct: 142 ADLSSFREKLGSDAYDELDVIGIDEAQF-------------------------------- 169
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 170 --------------FGDLYEFCCKAADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSV 215
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R EK+ +
Sbjct: 216 TKLTARCEICGKRAFFTLRKTAEKKTEL 243
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELN----KLIPHTKD-I 73
RRI+ + I++ KD RY + + THD KL + +L+ KL D +
Sbjct: 100 RRIQSETSNGRKVAIIKSNKDTRYGLDSIVTHDGVKLPCWALADLSSFREKLGSDAYDEL 159
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLA+ V KLT
Sbjct: 160 DVIGIDEAQFFGDLYEFCCKAADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLT 219
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C + A FT R EK+ L
Sbjct: 220 ARCEICGKRAFFTLRKTAEKKTEL 243
>gi|449505560|ref|XP_004162508.1| PREDICTED: thymidine kinase-like [Cucumis sativus]
Length = 244
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 91/208 (43%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VILGPMF+GKTT L+RRI+ I++ KD RY + + THD KL +
Sbjct: 43 EIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWAI 102
Query: 211 VELN----KLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
L+ K + D +DVIGIDE QF
Sbjct: 103 PNLSSFKKKFGQGSYDKLDVIGIDEAQF-------------------------------- 130
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 131 --------------FDDLYDFCCEAADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSV 176
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C A FT R QEKE +
Sbjct: 177 TKLTARCEICGNRAFFTLRKTQEKETEL 204
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELN----KLIPHTKD-I 73
RRI+ I++ KD RY + + THD KL + L+ K + D +
Sbjct: 61 RRIQSESCNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKL 120
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLA+ V KLT
Sbjct: 121 DVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDGDYLRRNFGSVLDIIPLADSVTKLT 180
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C A FT R QEKE L
Sbjct: 181 ARCEICGNRAFFTLRKTQEKETEL 204
>gi|403367875|gb|EJY83764.1| Thymidine kinase [Oxytricha trifallax]
Length = 212
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 57/209 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR-----YDTEKVSTHDQQKLTA 207
E+ILGPMFSGK++EL RR+ R+ A C++ +Y KD R + T ++ T +
Sbjct: 25 ELILGPMFSGKSSELFRRVLRHSIAQRSCILAKYQKDQRQLEETFKTAQIQTTKTNEYLN 84
Query: 208 VSAV----ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
+ + +LN+ + + VIGIDEGQF
Sbjct: 85 IMPISKLSDLNE--QNVSETKVIGIDEGQF------------------------------ 112
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
+PD+ + KIV+++ALDG F+R F I LIP+ +
Sbjct: 113 ----------------YPDLFDMCSELVLKDKIVIISALDGDFERKPFGQIPQLIPMCDE 156
Query: 324 VEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
+ KL A+C C +A FT R+ KEV +
Sbjct: 157 IIKLNAICQRCGDEAPFTHRLVTSKEVEL 185
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDID---- 74
RR+ R+ A C++ +Y KD R E T ++ E ++P +K D
Sbjct: 41 RRVLRHSIAQRSCILAKYQKDQRQLEETFKT---AQIQTTKTNEYLNIMPISKLSDLNEQ 97
Query: 75 ------VIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
VIGIDEGQF+PD+ + KIV+++ALDG F+R F I LIP+ + +
Sbjct: 98 NVSETKVIGIDEGQFYPDLFDMCSELVLKDKIVIISALDGDFERKPFGQIPQLIPMCDEI 157
Query: 129 EKLTAVCMSCFRDAAFTKRIGQEKEVIL 156
KL A+C C +A FT R+ KEV L
Sbjct: 158 IKLNAICQRCGDEAPFTHRLVTSKEVEL 185
>gi|167412589|gb|ABZ80023.1| thymidine kinase [Vaccinia virus GLV-1h68]
Length = 81
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 55/63 (87%)
Query: 290 MANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKE 349
MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM CF++A+F+KR+G+E E
Sbjct: 1 MANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETE 60
Query: 350 VRI 352
+ I
Sbjct: 61 IEI 63
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 57/65 (87%), Gaps = 1/65 (1%)
Query: 94 MANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKE 153
MAN GKIV+VAALDGTFQR FN+IL+LIPL+E V KLTAVCM CF++A+F+KR+G+E E
Sbjct: 1 MANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKCFKEASFSKRLGEETE 60
Query: 154 V-ILG 157
+ I+G
Sbjct: 61 IEIIG 65
>gi|302121704|gb|ADK92870.1| thymidine kinase [Hypericum perforatum]
Length = 239
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 96/214 (44%), Gaps = 54/214 (25%)
Query: 146 KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK- 204
+R E VI+GPMF+GKTT L+RRI + +++ +KD+RY + V THD K
Sbjct: 16 RRAHGEIHVIIGPMFAGKTTALLRRITSESDGGRKVAMIKSSKDNRYAVDSVVTHDGLKF 75
Query: 205 ----LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRS 260
L+ +S+ L IDVIGIDE QF
Sbjct: 76 PCWALSDLSSFNLRLGHEAYDSIDVIGIDEAQF--------------------------- 108
Query: 261 PFKTLANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIP 319
F D+ F + A+ GKIVVVA LDG + R F +L ++P
Sbjct: 109 -------------------FDDLYDFCCTAADRDGKIVVVAGLDGDYLRKRFGSVLDVVP 149
Query: 320 LAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRIE 353
LA+ V KLTA C C + A FT R + E R E
Sbjct: 150 LADTVTKLTARCELCGKRAFFTFR--KTSETRTE 181
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQK-----LTAVSAVELNKLIPHTKDI 73
RRI + +++ +KD+RY + V THD K L+ +S+ L I
Sbjct: 39 RRITSESDGGRKVAMIKSSKDNRYAVDSVVTHDGLKFPCWALSDLSSFNLRLGHEAYDSI 98
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F + A+ GKIVVVA LDG + R F +L ++PLA+ V KLT
Sbjct: 99 DVIGIDEAQFFDDLYDFCCTAADRDGKIVVVAGLDGDYLRKRFGSVLDVVPLADTVTKLT 158
Query: 133 AVCMSCFRDAAFTKRIGQE--KEVILG 157
A C C + A FT R E E++ G
Sbjct: 159 ARCELCGKRAFFTFRKTSETRTELVAG 185
>gi|149054921|gb|EDM06738.1| rCG32815, isoform CRA_d [Rattus norvegicus]
Length = 121
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 52/63 (82%)
Query: 290 MANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKE 349
MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+A++TKR+G EKE
Sbjct: 1 MANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREASYTKRLGLEKE 60
Query: 350 VRI 352
V +
Sbjct: 61 VEV 63
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/61 (72%), Positives = 51/61 (83%)
Query: 94 MANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKE 153
MAN GK V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+A++TKR+G EKE
Sbjct: 1 MANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREASYTKRLGLEKE 60
Query: 154 V 154
V
Sbjct: 61 V 61
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
KLTAV +E + +TK + G+++ VEVIGG+DKY +VCR CY K+S +
Sbjct: 37 KLTAV-CMECFREASYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 85
Query: 264 TLANENAALNVPPPPEFPDV 283
T N+ + P E P V
Sbjct: 86 TADNKENYSVLGQPIEIPAV 105
>gi|304317932|ref|YP_003853077.1| thymidine kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302779434|gb|ADL69993.1| Thymidine kinase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 193
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+ ELIRRI+R + A + + + A DDRY +KV +H+ + A++ V+
Sbjct: 12 EVITGPMFSGKSEELIRRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIAIVK 71
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ + +D DV IDE QF++
Sbjct: 72 ASEILTYAEEDTDVFAIDEVQFLDY----------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + +A++GK V+ A LD F+ F L+ +AE V+KLTA+C
Sbjct: 97 ----------EIVDIVKEIADSGKRVICAGLDMDFRGEPFGPTPELMAIAEFVDKLTAIC 146
Query: 332 MSCFRDAAFTKRI 344
M C A T+R+
Sbjct: 147 MKCGNPATRTQRL 159
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI+R + A + + + A DDRY +KV +H+ + A++ V+ ++++ + + D DV
Sbjct: 28 RRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIAIVKASEILTYAEEDTDVFA 87
Query: 78 IDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QF ++V + +A++GK V+ A LD F+ F L+ +AE V+KLTA+CM
Sbjct: 88 IDEVQFLDYEIVDIVKEIADSGKRVICAGLDMDFRGEPFGPTPELMAIAEFVDKLTAICM 147
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 148 KCGNPATRTQRL 159
>gi|357111878|ref|XP_003557737.1| PREDICTED: thymidine kinase-like [Brachypodium distachyon]
Length = 279
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 91/203 (44%), Gaps = 52/203 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT LIRR++ +++ KD+RY + THD K+ +
Sbjct: 77 EIHVIVGPMFAGKTTALIRRVQAEAATGRTVALIKSDKDNRYGLDSAVTHDGTKMACWAL 136
Query: 211 VEL----NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L +KL D +DVIGIDE QF
Sbjct: 137 PKLSSFQDKLGTEAYDKVDVIGIDEAQF-------------------------------- 164
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V
Sbjct: 165 --------------FDDLYDFCCKAADHDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSV 210
Query: 325 EKLTAVCMSCFRDAAFTKRIGQE 347
KLTA C C A FT R QE
Sbjct: 211 TKLTARCELCGHRAFFTLRKTQE 233
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHTKD-I 73
RR++ +++ KD+RY + THD K+ + +L +KL D +
Sbjct: 95 RRVQAEAATGRTVALIKSDKDNRYGLDSAVTHDGTKMACWALPKLSSFQDKLGTEAYDKV 154
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GKIVVVA LDG ++R F +L +IPLA+ V KLT
Sbjct: 155 DVIGIDEAQFFDDLYDFCCKAADHDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLT 214
Query: 133 AVCMSCFRDAAFTKRIGQE 151
A C C A FT R QE
Sbjct: 215 ARCELCGHRAFFTLRKTQE 233
>gi|224068851|ref|XP_002302841.1| predicted protein [Populus trichocarpa]
gi|222844567|gb|EEE82114.1| predicted protein [Populus trichocarpa]
Length = 196
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 90/207 (43%), Gaps = 50/207 (24%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT+L+RRI + +++ +KD RY + V THD K S
Sbjct: 2 EVHVIIGPMFAGKTTDLLRRIESESSSGRNVAMIKSSKDTRYANDSVVTHDGLKFPCWSL 61
Query: 211 VELNKLIPHTKD-----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L D +DVIGIDE QF E D Y C+
Sbjct: 62 PDLTSFHHKLGDDEYHKLDVIGIDEAQFFE-----DLYEFCCK----------------- 99
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
+ + GK ++VA LDG + R F +L +IPLA+ V
Sbjct: 100 -----------------------AADHDGKTIIVAGLDGDYLRRSFGSVLDVIPLADTVT 136
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R E + +
Sbjct: 137 KLTARCELCGKRAFFTLRKTAETQTEL 163
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-----I 73
RRI + +++ +KD RY + V THD K S +L D +
Sbjct: 20 RRIESESSSGRNVAMIKSSKDTRYANDSVVTHDGLKFPCWSLPDLTSFHHKLGDDEYHKL 79
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK ++VA LDG + R F +L +IPLA+ V KLT
Sbjct: 80 DVIGIDEAQFFEDLYEFCCKAADHDGKTIIVAGLDGDYLRRSFGSVLDVIPLADTVTKLT 139
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C + A FT R E + L
Sbjct: 140 ARCELCGKRAFFTLRKTAETQTEL 163
>gi|302851464|ref|XP_002957256.1| hypothetical protein VOLCADRAFT_84037 [Volvox carteri f.
nagariensis]
gi|300257506|gb|EFJ41754.1| hypothetical protein VOLCADRAFT_84037 [Volvox carteri f.
nagariensis]
Length = 274
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 50/199 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E +I+GPMF+GKTT L++ +R Q A R ++V+ A D RY T+ V TH ++L +S
Sbjct: 70 EIHLIMGPMFAGKTTRLLQHVREAQSAGQRVVVVKSAVDTRYSTDHVVTHTGERLPCISL 129
Query: 211 VELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
L L +DV+ +DE QF++ +
Sbjct: 130 SRLGSLREQLGTAEYDKVDVVAVDEAQFIDDL---------------------------- 161
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
V S + GK+V+VA L+G F+R F +L L+PLA+ V+
Sbjct: 162 -----------------VESVLHTAERDGKVVIVAGLNGDFRRQRFGQLLELVPLADRVD 204
Query: 326 KLTAVCMSCFRDAAFTKRI 344
KL C C + + FT RI
Sbjct: 205 KLEGRCSFCNKPSHFTLRI 223
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTK 71
+ +R Q A R ++V+ A D RY T+ V TH ++L +S L L
Sbjct: 86 LLQHVREAQSAGQRVVVVKSAVDTRYSTDHVVTHTGERLPCISLSRLGSLREQLGTAEYD 145
Query: 72 DIDVIGIDEGQFFPDVV-SFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+DV+ +DE QF D+V S + GK+V+VA L+G F+R F +L L+PLA+ V+K
Sbjct: 146 KVDVVAVDEAQFIDDLVESVLHTAERDGKVVIVAGLNGDFRRQRFGQLLELVPLADRVDK 205
Query: 131 LTAVCMSCFRDAAFTKRI 148
L C C + + FT RI
Sbjct: 206 LEGRCSFCNKPSHFTLRI 223
>gi|433656143|ref|YP_007299851.1| thymidine kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433294332|gb|AGB20154.1| thymidine kinase [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 192
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPMFSGK+ ELIRRI+R + A + + + A DDRY +KV +H+ + A++ V+
Sbjct: 11 EIITGPMFSGKSEELIRRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIAIVK 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ + +D DV IDE QF++
Sbjct: 71 ASEILTYAEEDTDVFAIDEVQFLDY----------------------------------- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + +A++GK V+ A LD F+ F L+ +AE V+KLTA+C
Sbjct: 96 ----------EIVDIVKEIADSGKRVICAGLDMDFRGEPFGPTPELMAIAEFVDKLTAIC 145
Query: 332 MSCFRDAAFTKRI 344
M C A T+R+
Sbjct: 146 MKCGNPATRTQRL 158
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI+R + A + + + A DDRY +KV +H+ + A++ V+ ++++ + + D DV
Sbjct: 27 RRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIAIVKASEILTYAEEDTDVFA 86
Query: 78 IDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QF ++V + +A++GK V+ A LD F+ F L+ +AE V+KLTA+CM
Sbjct: 87 IDEVQFLDYEIVDIVKEIADSGKRVICAGLDMDFRGEPFGPTPELMAIAEFVDKLTAICM 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGNPATRTQRL 158
>gi|108705824|gb|ABF93619.1| Thymidine kinase, putative, expressed [Oryza sativa Japonica Group]
gi|215694639|dbj|BAG89830.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 277
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 96/209 (45%), Gaps = 53/209 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYR-CMIVRYAKDDRYDTEKVSTHDQQKLTAVS 209
E VI+GPMF+GKTT L+RR++ R +++ KD+RY + V THD K+ +
Sbjct: 74 EIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTHDGTKMPCWA 133
Query: 210 AVEL----NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
EL +KL D +DVIGIDE QF
Sbjct: 134 LPELSSFQDKLGTEAYDKVDVIGIDEAQF------------------------------- 162
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
F D+ F A+ GKIVVVA LDG ++R F +L +IPLA+
Sbjct: 163 ---------------FDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADS 207
Query: 324 VEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
V KLTA C C R A FT R +E + +
Sbjct: 208 VTKLTARCELCGRRAFFTLRKTRETKTEL 236
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHTKD-IDVIGIDEGQFFPDV 87
+++ KD+RY + V THD K+ + EL +KL D +DVIGIDE QFF D+
Sbjct: 107 LIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDL 166
Query: 88 VSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
F A+ GKIVVVA LDG ++R F +L +IPLA+ V KLTA C C R A FT
Sbjct: 167 HDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTL 226
Query: 147 RIGQEKEVIL 156
R +E + L
Sbjct: 227 RKTRETKTEL 236
>gi|313768180|ref|YP_004061611.1| hypothetical protein BpV1_181c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599787|gb|ADQ91808.1| hypothetical protein BpV1_181c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 172
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 50/202 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I+G MFSGKT+ELIRR++RY+ R +++ KD R + + THD + +
Sbjct: 4 KIIMGNMFSGKTSELIRRLKRYKVIGKRILVINSKKDTRASEDVLRTHDNVRFDCIKTNN 63
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+++ D+DVI +DE QF
Sbjct: 64 LDEV--DFSDVDVIAMDEAQF--------------------------------------- 82
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F + F E + ++GK +++A LDG +++ F +++ +PLA+ V K++A+CM
Sbjct: 83 -------FTGLKKFVEKVLDSGKTILLAGLDGDYKQRKFGELIDCVPLADKVFKISAMCM 135
Query: 333 SCF--RDAAFTKRIGQEKEVRI 352
C FTKRI Q E+ +
Sbjct: 136 VCMDGTHGPFTKRIVQNDELEL 157
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++RY+ R +++ KD R + + THD + + L+++ D+DVI +
Sbjct: 20 RRLKRYKVIGKRILVINSKKDTRASEDVLRTHDNVRFDCIKTNNLDEV--DFSDVDVIAM 77
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DE QFF + F E + ++GK +++A LDG +++ F +++ +PLA+ V K++A+CM C
Sbjct: 78 DEAQFFTGLKKFVEKVLDSGKTILLAGLDGDYKQRKFGELIDCVPLADKVFKISAMCMVC 137
Query: 139 F--RDAAFTKRIGQEKEVIL 156
FTKRI Q E+ L
Sbjct: 138 MDGTHGPFTKRIVQNDELEL 157
>gi|97536559|sp|O81263.2|KITH_ORYSJ RecName: Full=Thymidine kinase
Length = 271
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 96/209 (45%), Gaps = 53/209 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYR-CMIVRYAKDDRYDTEKVSTHDQQKLTAVS 209
E VI+GPMF+GKTT L+RR++ R +++ KD+RY + V THD K+ +
Sbjct: 68 EIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTHDGTKMPCWA 127
Query: 210 AVEL----NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
EL +KL D +DVIGIDE QF
Sbjct: 128 LPELSSFQDKLGTEAYDKVDVIGIDEAQF------------------------------- 156
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
F D+ F A+ GKIVVVA LDG ++R F +L +IPLA+
Sbjct: 157 ---------------FDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADS 201
Query: 324 VEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
V KLTA C C R A FT R +E + +
Sbjct: 202 VTKLTARCELCGRRAFFTLRKTRETKTEL 230
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHTKD-IDVIGIDEGQFFPDV 87
+++ KD+RY + V THD K+ + EL +KL D +DVIGIDE QFF D+
Sbjct: 101 LIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDL 160
Query: 88 VSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
F A+ GKIVVVA LDG ++R F +L +IPLA+ V KLTA C C R A FT
Sbjct: 161 HDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTL 220
Query: 147 RIGQEKEVIL 156
R +E + L
Sbjct: 221 RKTRETKTEL 230
>gi|167412587|gb|ABZ80021.1| thymidine kinase [Vaccinia virus GLV-1h68]
Length = 95
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+
Sbjct: 3 GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQF 233
A +L ++ D VIGIDEGQF
Sbjct: 62 EATKLCDVLESITDFSVIGIDEGQF 86
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RRYQ A Y+C+ ++Y+ D+RY T + THD+ A+ A +L ++ D VIGI
Sbjct: 23 RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81
Query: 79 DEGQFFPDVVSF 90
DEGQFFPD+V
Sbjct: 82 DEGQFFPDIVEL 93
>gi|408357423|ref|YP_006845954.1| thymidine kinase [Amphibacillus xylanus NBRC 15112]
gi|407728194|dbj|BAM48192.1| thymidine kinase [Amphibacillus xylanus NBRC 15112]
Length = 198
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 46/197 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRRIRR +Y ++ + A D+RY E + TH+ + A S
Sbjct: 7 ELICGSMFSGKSEELIRRIRRAKYGKLNTVVFKPAIDNRYSEEAIMTHNGNSIKAYSVTS 66
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L++L+ + +IDV+GIDE QF E
Sbjct: 67 LSELVEKLSPEIDVVGIDEVQFFE------------------------------------ 90
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V +A+ G V++A LD F+ F + L+ L+E V KL A+C
Sbjct: 91 ---------KEIVDLVSQLADLGFRVILAGLDTNFRGEPFGFMPELMALSESVTKLNAIC 141
Query: 332 MSCFRDAAFTKRIGQEK 348
C DA+ T+R+ +K
Sbjct: 142 PKCGADASRTQRLIDQK 158
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 2/136 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR +Y ++ + A D+RY E + TH+ + A S L++L+ + +IDV+G
Sbjct: 23 RRIRRAKYGKLNTVVFKPAIDNRYSEEAIMTHNGNSIKAYSVTSLSELVEKLSPEIDVVG 82
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V +A+ G V++A LD F+ F + L+ L+E V KL A+C
Sbjct: 83 IDEVQFFEKEIVDLVSQLADLGFRVILAGLDTNFRGEPFGFMPELMALSESVTKLNAICP 142
Query: 137 SCFRDAAFTKRIGQEK 152
C DA+ T+R+ +K
Sbjct: 143 KCGADASRTQRLIDQK 158
>gi|302756999|ref|XP_002961923.1| hypothetical protein SELMODRAFT_403348 [Selaginella moellendorffii]
gi|300170582|gb|EFJ37183.1| hypothetical protein SELMODRAFT_403348 [Selaginella moellendorffii]
Length = 204
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 82/146 (56%), Gaps = 7/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI----D 74
+RI+ A R +V+ KD RY + +H +K+ + L+ H ++ +
Sbjct: 11 QRIQAEADAGRRVALVKSDKDTRYGLGCIVSHSGKKMHCAAVASLSDFKSHKPELYAQAE 70
Query: 75 VIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+IGIDE QFF D++SF +S A+ GK ++VA LDG F R F L L+PLA+ V KL++
Sbjct: 71 IIGIDEAQFFDDLLSFCQSAADWDGKTLIVAGLDGDFLRQRFGSALDLVPLADSVTKLSS 130
Query: 134 VCMSCFRDAAFT--KRIGQEKEVILG 157
C C R AAFT K + KEVI G
Sbjct: 131 RCEICGRAAAFTFRKTDDRRKEVIGG 156
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 51/190 (26%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MF+GKTT L++RI+ A R +V+ KD RY + +H +K+ + L+
Sbjct: 1 MFAGKTTVLLQRIQAEADAGRRVALVKSDKDTRYGLGCIVSHSGKKMHCAAVASLSDFKS 60
Query: 219 HTKDI----DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
H ++ ++IGIDE QF
Sbjct: 61 HKPELYAQAEIIGIDEAQF----------------------------------------- 79
Query: 275 PPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
F D++SF +S A+ GK ++VA LDG F R F L L+PLA+ V KL++ C
Sbjct: 80 -----FDDLLSFCQSAADWDGKTLIVAGLDGDFLRQRFGSALDLVPLADSVTKLSSRCEI 134
Query: 334 CFRDAAFTKR 343
C R AAFT R
Sbjct: 135 CGRAAAFTFR 144
>gi|350535573|ref|NP_001234713.1| TK1-like deoxyribonucleoside kinase [Solanum lycopersicum]
gi|33325041|gb|AAQ08180.1| TK1-like deoxyribonucleoside kinase [Solanum lycopersicum]
Length = 234
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 92/208 (44%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+RR+ ++++ +KD RY + V THD + S
Sbjct: 26 EIHVIVGPMFAGKTTALLRRVNLESNDGRNVVLIKSSKDARYAVDAVVTHDGTRFPCWSL 85
Query: 211 VELNKLIPH-TKD----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L+ KD +DVIGIDE QF
Sbjct: 86 PDLSSFKQRFGKDAYEKVDVIGIDEAQF-------------------------------- 113
Query: 266 ANENAALNVPPPPEFPDVVSFAESMAN-AGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F + A+ GKI+VVA LDG + R F +L +IPLA+ V
Sbjct: 114 --------------FGDLYEFCCNAADFDGKIIVVAGLDGDYLRKSFGSVLDIIPLADTV 159
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C R A FT R E E +
Sbjct: 160 TKLTARCELCNRRAFFTFRKTNETETEL 187
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKD----I 73
RR+ ++++ +KD RY + V THD + S +L+ KD +
Sbjct: 44 RRVNLESNDGRNVVLIKSSKDARYAVDAVVTHDGTRFPCWSLPDLSSFKQRFGKDAYEKV 103
Query: 74 DVIGIDEGQFFPDVVSFAESMAN-AGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F + A+ GKI+VVA LDG + R F +L +IPLA+ V KLT
Sbjct: 104 DVIGIDEAQFFGDLYEFCCNAADFDGKIIVVAGLDGDYLRKSFGSVLDIIPLADTVTKLT 163
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C R A FT R E E L
Sbjct: 164 ARCELCNRRAFFTFRKTNETETEL 187
>gi|357447967|ref|XP_003594259.1| Thymidine kinase [Medicago truncatula]
gi|355483307|gb|AES64510.1| Thymidine kinase [Medicago truncatula]
Length = 644
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDIDVIGIDEGQFFPDV 87
I++ +KD RY + + THD KL + L+ + +DVIGIDE QFF D+
Sbjct: 475 IIKSSKDTRYGLDSIVTHDGTKLPCWALSNLSSFKQKFGVDAYDQLDVIGIDEAQFFDDL 534
Query: 88 VSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
F A+ GK V+VA LDG + R F +L +IPLA+ + KL A C C ++A FT
Sbjct: 535 YDFCREAADHDGKTVIVAGLDGDYLRKSFGSVLDIIPLADSITKLNARCEICGKNAYFTL 594
Query: 147 RIGQEKEVIL 156
R Q+K+V L
Sbjct: 595 RKTQDKQVEL 604
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 83/212 (39%), Gaps = 54/212 (25%)
Query: 150 QEKEVILGPMFSG----KTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
+E VI G + E+ +R I++ +KD RY + + THD KL
Sbjct: 438 KEHSVIWGALLGACLWDDVEEVRASLRESGVTKENVAIIKSSKDTRYGLDSIVTHDGTKL 497
Query: 206 TAVSAVELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRS 260
+ L+ + +DVIGIDE QF D CRE
Sbjct: 498 PCWALSNLSSFKQKFGVDAYDQLDVIGIDEAQFF------DDLYDFCRE----------- 540
Query: 261 PFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPL 320
+ + GK V+VA LDG + R F +L +IPL
Sbjct: 541 ----------------------------AADHDGKTVIVAGLDGDYLRKSFGSVLDIIPL 572
Query: 321 AECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
A+ + KL A C C ++A FT R Q+K+V +
Sbjct: 573 ADSITKLNARCEICGKNAYFTLRKTQDKQVEL 604
>gi|312599330|gb|ADQ91353.1| hypothetical protein BpV2_186c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 172
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 50/202 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++I+G MFSGKT+ELIRR++RY+ R +++ KD R + + THD + +
Sbjct: 4 KIIMGNMFSGKTSELIRRLKRYKVIGKRILVINSKKDTRASEDVLRTHDNVRFDCIKTNS 63
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+++ + DVI IDE QF
Sbjct: 64 LDEV--DFSNADVIAIDEAQF--------------------------------------- 82
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
F + +F E + ++GK +++A LDG +++ F +++ +PLA+ V K++A+CM
Sbjct: 83 -------FTGLKTFVEKVLDSGKTILLAGLDGDYKQRKFGELIDCVPLADKVFKISAMCM 135
Query: 333 SCF--RDAAFTKRIGQEKEVRI 352
C FTKRI Q E+ +
Sbjct: 136 ECMDGTHGPFTKRIVQNDELEL 157
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++RY+ R +++ KD R + + THD + + L+++ + DVI I
Sbjct: 20 RRLKRYKVIGKRILVINSKKDTRASEDVLRTHDNVRFDCIKTNSLDEV--DFSNADVIAI 77
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DE QFF + +F E + ++GK +++A LDG +++ F +++ +PLA+ V K++A+CM C
Sbjct: 78 DEAQFFTGLKTFVEKVLDSGKTILLAGLDGDYKQRKFGELIDCVPLADKVFKISAMCMEC 137
Query: 139 F--RDAAFTKRIGQEKEVIL 156
FTKRI Q E+ L
Sbjct: 138 MDGTHGPFTKRIVQNDELEL 157
>gi|418413303|ref|ZP_12986545.1| thymidine kinase [Staphylococcus epidermidis BVS058A4]
gi|410879190|gb|EKS27041.1| thymidine kinase [Staphylococcus epidermidis BVS058A4]
Length = 199
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++++VIGIDE QF E
Sbjct: 71 AQEILNHKLEEVNVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+VS E++A G V+VA LD F+ F + L+ ++E + KL AVC
Sbjct: 95 ---------DDIVSIVENLAENGHRVIVAGLDMDFRGEPFEPMPKLLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ ++ A++ +++ H ++++V
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E++A G V+VA LD F+ F + L+ ++E + KL AV
Sbjct: 85 IGIDEVQFFEDDIVSIVENLAENGHRVIVAGLDMDFRGEPFEPMPKLLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158
>gi|229495530|ref|ZP_04389263.1| thymidine kinase [Porphyromonas endodontalis ATCC 35406]
gi|229317513|gb|EEN83413.1| thymidine kinase [Porphyromonas endodontalis ATCC 35406]
Length = 189
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR A + + + A D RYD EKV +HD + + ++ + D DV+GI
Sbjct: 29 RRLRRAAIAKMKVEVYKPATDIRYDQEKVVSHDANAVESTPLENAQMILLYASDADVVGI 88
Query: 79 DEGQFFPDVVSFAES-MANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + + + S +A++GK V++A LD F+R F + L+ LA+ V K+ AVCM
Sbjct: 89 DEAQFFDEALVYVVSELADSGKRVIIAGLDMDFRRNPFGPMPQLMALADSVTKVHAVCMD 148
Query: 138 CFRDAAFTKRIGQ-EKEVILGPM 159
C A ++ R+ ++ V+LG +
Sbjct: 149 CGLPANYSYRLSSDDRTVLLGEL 171
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 45/195 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR A + + + A D RYD EKV +HD + +
Sbjct: 13 EVICGSMFSGKTEELMRRLRRAAIAKMKVEVYKPATDIRYDQEKVVSHDANAVESTPLEN 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + D DV+GIDE QF +
Sbjct: 73 AQMILLYASDADVVGIDEAQFFD------------------------------------- 95
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +A++GK V++A LD F+R F + L+ LA+ V K+ AVCM
Sbjct: 96 --------EALVYVVSELADSGKRVIIAGLDMDFRRNPFGPMPQLMALADSVTKVHAVCM 147
Query: 333 SCFRDAAFTKRIGQE 347
C A ++ R+ +
Sbjct: 148 DCGLPANYSYRLSSD 162
>gi|217072978|gb|ACJ84849.1| unknown [Medicago truncatula]
Length = 226
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 83/196 (42%), Gaps = 50/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
VI+GPMF+GKT+ LIRRI+ I++ +KD RY + + THD KL +
Sbjct: 74 HVIVGPMFAGKTSSLIRRIQSESGNGRNVAIIKSSKDTRYGLDSIVTHDGTKLPCWALSN 133
Query: 213 LNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
L+ + +DVIGIDE QF D CRE
Sbjct: 134 LSSFKQKFGVDAYDQLDVIGIDEAQFF------DDLYDFCREAADHD------------- 174
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
GK V+VA LDG + R F +L +IPLA+ + KL
Sbjct: 175 --------------------------GKTVIVAGLDGDYLRKSFGSVLDIIPLADSITKL 208
Query: 328 TAVCMSCFRDAAFTKR 343
A C C ++A FT R
Sbjct: 209 NARCEICGKNAYFTLR 224
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDI 73
RRI+ I++ +KD RY + + THD KL + L+ + +
Sbjct: 90 RRIQSESGNGRNVAIIKSSKDTRYGLDSIVTHDGTKLPCWALSNLSSFKQKFGVDAYDQL 149
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLA+ + KL
Sbjct: 150 DVIGIDEAQFFDDLYDFCREAADHDGKTVIVAGLDGDYLRKSFGSVLDIIPLADSITKLN 209
Query: 133 AVCMSCFRDAAFTKR 147
A C C ++A FT R
Sbjct: 210 ARCEICGKNAYFTLR 224
>gi|322436811|ref|YP_004219023.1| thymidine kinase [Granulicella tundricola MP5ACTX9]
gi|321164538|gb|ADW70243.1| Thymidine kinase [Granulicella tundricola MP5ACTX9]
Length = 204
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 53/214 (24%)
Query: 141 DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTH 200
+AA RI EV++GPMFSGK+ ELIRR++R + A R + D RY +++H
Sbjct: 2 NAAVPGRI----EVVVGPMFSGKSEELIRRLKRARIARQRVACFKPDIDLRYHRTAIASH 57
Query: 201 DQQKLTAVSAVELNK----LIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAP 256
Q AV+ + + L P +DV+G+DE Q+ +
Sbjct: 58 SSQTYEAVTVANVERLREELYPQLDGVDVVGMDEVQWFD--------------------- 96
Query: 257 IKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILS 316
P +V + + GK VV+A LD TF F I
Sbjct: 97 ------------------------PSIVGLVLELVHRGKRVVLAGLDTTFAGEPFGSIPQ 132
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 350
L+ +A+ V KL+AVCM C A T+R+G +E+
Sbjct: 133 LMAIADEVAKLSAVCMVCGAPAIHTQRLGMSREL 166
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL----IPHTKDID 74
RR++R + A R + D RY +A+H Q AV+ + +L P +D
Sbjct: 26 RRLKRARIARQRVACFKPDIDLRYHRTAIASHSSQTYEAVTVANVERLREELYPQLDGVD 85
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+G+DE Q+F P +V + + GK VV+A LD TF F I L+ +A+ V KL+A
Sbjct: 86 VVGMDEVQWFDPSIVGLVLELVHRGKRVVLAGLDTTFAGEPFGSIPQLMAIADEVAKLSA 145
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
VCM C A T+R+G +E+++
Sbjct: 146 VCMVCGAPAIHTQRLGMSRELVV 168
>gi|229164278|ref|ZP_04292211.1| Thymidine kinase [Bacillus cereus R309803]
gi|228619218|gb|EEK76111.1| Thymidine kinase [Bacillus cereus R309803]
Length = 195
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+D+DVI IDE QF +
Sbjct: 71 SKDIFEHITEDMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+D+DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEDMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|218900456|ref|YP_002448867.1| thymidine kinase [Bacillus cereus G9842]
gi|228903805|ref|ZP_04067921.1| Thymidine kinase [Bacillus thuringiensis IBL 4222]
gi|228911169|ref|ZP_04074975.1| Thymidine kinase [Bacillus thuringiensis IBL 200]
gi|228942477|ref|ZP_04105014.1| Thymidine kinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228968459|ref|ZP_04129448.1| Thymidine kinase [Bacillus thuringiensis serovar sotto str. T04001]
gi|228975409|ref|ZP_04135965.1| Thymidine kinase [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228982046|ref|ZP_04142339.1| Thymidine kinase [Bacillus thuringiensis Bt407]
gi|384189419|ref|YP_005575315.1| thymidine kinase [Bacillus thuringiensis serovar chinensis CT-43]
gi|402563072|ref|YP_006605796.1| thymidine kinase [Bacillus thuringiensis HD-771]
gi|410677748|ref|YP_006930119.1| thymidine kinase Tdk [Bacillus thuringiensis Bt407]
gi|423362827|ref|ZP_17340327.1| thymidine kinase [Bacillus cereus VD022]
gi|423386819|ref|ZP_17364074.1| thymidine kinase [Bacillus cereus BAG1X1-2]
gi|423526849|ref|ZP_17503294.1| thymidine kinase [Bacillus cereus HuB1-1]
gi|423565779|ref|ZP_17542054.1| thymidine kinase [Bacillus cereus MSX-A1]
gi|434378449|ref|YP_006613093.1| thymidine kinase [Bacillus thuringiensis HD-789]
gi|452201835|ref|YP_007481916.1| Thymidine kinase [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|226729735|sp|B7IQY3.1|KITH_BACC2 RecName: Full=Thymidine kinase
gi|218543303|gb|ACK95697.1| thymidine kinase [Bacillus cereus G9842]
gi|228777710|gb|EEM25984.1| Thymidine kinase [Bacillus thuringiensis Bt407]
gi|228784391|gb|EEM32414.1| Thymidine kinase [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228791239|gb|EEM38852.1| Thymidine kinase [Bacillus thuringiensis serovar sotto str. T04001]
gi|228817219|gb|EEM63307.1| Thymidine kinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228848532|gb|EEM93380.1| Thymidine kinase [Bacillus thuringiensis IBL 200]
gi|228855832|gb|EEN00376.1| Thymidine kinase [Bacillus thuringiensis IBL 4222]
gi|326943128|gb|AEA19024.1| thymidine kinase [Bacillus thuringiensis serovar chinensis CT-43]
gi|401077101|gb|EJP85446.1| thymidine kinase [Bacillus cereus VD022]
gi|401193461|gb|EJR00467.1| thymidine kinase [Bacillus cereus MSX-A1]
gi|401630671|gb|EJS48469.1| thymidine kinase [Bacillus cereus BAG1X1-2]
gi|401791724|gb|AFQ17763.1| thymidine kinase [Bacillus thuringiensis HD-771]
gi|401877006|gb|AFQ29173.1| thymidine kinase [Bacillus thuringiensis HD-789]
gi|402454721|gb|EJV86511.1| thymidine kinase [Bacillus cereus HuB1-1]
gi|409176877|gb|AFV21182.1| thymidine kinase Tdk [Bacillus thuringiensis Bt407]
gi|452107228|gb|AGG04168.1| Thymidine kinase [Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 195
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+D+DVI IDE QF +
Sbjct: 71 SKDIFEHITEDMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+D+DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEDMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|390933448|ref|YP_006390953.1| thymidine kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|325668151|gb|ADZ44521.1| thymidine kinase [Cloning vector pMU1647]
gi|378753912|gb|AFC37774.1| thymidine kinase [Cloning vector pAMG258]
gi|389568949|gb|AFK85354.1| Thymidine kinase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|407943240|gb|AFU51871.1| thymidine kinase [Allelic replacement vector pAMG269]
gi|407943246|gb|AFU51876.1| thymidine kinase [Allelic replacement vector pAMG270]
gi|407943254|gb|AFU51883.1| thymidine kinase [CipA deletion vector pDGO-03]
gi|407943259|gb|AFU51887.1| thymidine kinase [CipA deletion vector pDGO-34]
gi|448872332|gb|AGE45857.1| thymidine kinase [cloning vector pMU2051]
Length = 192
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ GPMFSGK+ ELIRRI+R + A + + + A DDRY +KV +H+ + A++ V+
Sbjct: 11 EVVTGPMFSGKSEELIRRIKRAKIARQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIAIVK 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ ++ + +D DV IDE QF +
Sbjct: 71 ASDILAYAEEDTDVFAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + +A++GK V+ A LD F+ F L+ +AE V+KLTA+C
Sbjct: 95 ---------SEIVDIVKEIADSGKRVICAGLDMDFRGEPFGPTPELMAIAEFVDKLTAIC 145
Query: 332 MSCFRDAAFTKRI 344
M C A T+R+
Sbjct: 146 MKCGNPATRTQRL 158
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI+R + A + + + A DDRY +KV +H+ + A++ V+ + ++ + + D DV
Sbjct: 27 RRIKRAKIARQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIAIVKASDILAYAEEDTDVFA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + +A++GK V+ A LD F+ F L+ +AE V+KLTA+CM
Sbjct: 87 IDEVQFFDSEIVDIVKEIADSGKRVICAGLDMDFRGEPFGPTPELMAIAEFVDKLTAICM 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGNPATRTQRL 158
>gi|363540105|ref|YP_004894407.1| mg356 gene product [Megavirus chiliensis]
gi|448825307|ref|YP_007418238.1| thymidine kinase [Megavirus lba]
gi|350611270|gb|AEQ32714.1| thymidine kinase [Megavirus chiliensis]
gi|371943643|gb|AEX61471.1| thymidine kinase [Megavirus courdo7]
gi|425701234|gb|AFX92396.1| thymidine kinase [Megavirus courdo11]
gi|444236492|gb|AGD92262.1| thymidine kinase [Megavirus lba]
Length = 222
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 89/154 (57%), Gaps = 13/154 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRY---DTEK--VATHDQQKLTAVSAVELNKLIPH-- 69
F R + R + A RC+I+++ +DDR+ D+E+ + TH+Q + V N L
Sbjct: 18 FIRLVDRKKIAGKRCLIIKHIRDDRFEKNDSEEKHIITHNQIRYKNCDIVYSNNLFNSNF 77
Query: 70 ----TKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLA 125
T + DV+G++EG FF DV +F +AN V+V+ +D +F++ F +I LI ++
Sbjct: 78 FELITTNYDVVGVEEGFFFDDVANFCNELANNNIEVIVSTIDSSFKQEIFQEIGKLIAIS 137
Query: 126 ECVEKLTAVCMSC-FRDAAFTKR-IGQEKEVILG 157
E V KL AVCM C DA+FT R + + E+++G
Sbjct: 138 ENVIKLKAVCMKCKINDASFTIRTVDNDNEILVG 171
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 58/201 (28%)
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY---DTEK--VSTHDQQKLTAVS 209
I+GPMFSGKTTE IR + R + A RC+I+++ +DDR+ D+E+ + TH+Q +
Sbjct: 6 IIGPMFSGKTTEFIRLVDRKKIAGKRCLIIKHIRDDRFEKNDSEEKHIITHNQIRYKNCD 65
Query: 210 AVELNKLIPH------TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
V N L T + DV+G++EG F
Sbjct: 66 IVYSNNLFNSNFFELITTNYDVVGVEEGFF------------------------------ 95
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
F DV +F +AN V+V+ +D +F++ F +I LI ++E
Sbjct: 96 ----------------FDDVANFCNELANNNIEVIVSTIDSSFKQEIFQEIGKLIAISEN 139
Query: 324 VEKLTAVCMSC-FRDAAFTKR 343
V KL AVCM C DA+FT R
Sbjct: 140 VIKLKAVCMKCKINDASFTIR 160
>gi|418326911|ref|ZP_12938086.1| thymidine kinase [Staphylococcus epidermidis VCU071]
gi|420164485|ref|ZP_14671214.1| thymidine kinase [Staphylococcus epidermidis NIHLM095]
gi|420169227|ref|ZP_14675830.1| thymidine kinase [Staphylococcus epidermidis NIHLM087]
gi|365224017|gb|EHM65287.1| thymidine kinase [Staphylococcus epidermidis VCU071]
gi|394231590|gb|EJD77216.1| thymidine kinase [Staphylococcus epidermidis NIHLM095]
gi|394231690|gb|EJD77314.1| thymidine kinase [Staphylococcus epidermidis NIHLM087]
Length = 199
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++++VIGIDE QF E
Sbjct: 71 AQEILNHKLEEVNVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+VS E +A G V+VA LD F+ F + L+ ++E + KL AVC
Sbjct: 95 ---------DDIVSIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ ++ A++ +++ H ++++V
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E +A G V+VA LD F+ F + L+ ++E + KL AV
Sbjct: 85 IGIDEVQFFEDDIVSIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158
>gi|423394475|ref|ZP_17371676.1| thymidine kinase [Bacillus cereus BAG2X1-1]
gi|423405347|ref|ZP_17382496.1| thymidine kinase [Bacillus cereus BAG2X1-3]
gi|401658162|gb|EJS75661.1| thymidine kinase [Bacillus cereus BAG2X1-1]
gi|401661249|gb|EJS78718.1| thymidine kinase [Bacillus cereus BAG2X1-3]
Length = 195
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AVS
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQYAIVFKPCIDNRYSEEDVVSHNGSKVKAVSVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHVTEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SECGSPASRTQRL 158
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AVS + H T+++DVI
Sbjct: 27 RRIRRTQFAKQYAIVFKPCIDNRYSEEDVVSHNGSKVKAVSVSASKDIFNHVTEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 ECGSPASRTQRL 158
>gi|333898005|ref|YP_004471879.1| thymidine kinase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333113270|gb|AEF18207.1| Thymidine kinase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 192
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ GPMFSGK+ ELIRRI+R + A + + + A DDRY +KV +H+ + A++ V+
Sbjct: 11 EVVTGPMFSGKSEELIRRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIAIVK 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ ++ + +D DV IDE QF +
Sbjct: 71 ASDILTYAEEDTDVFAIDEIQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + +A++GK V+ A LD F+ F L+ +AE V+KLTA+C
Sbjct: 95 ---------SEIVDIVKEIADSGKRVICAGLDMDFRGEPFGPTPELMAIAEFVDKLTAIC 145
Query: 332 MSCFRDAAFTKRI 344
M C A T+R+
Sbjct: 146 MKCGNPATRTQRL 158
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI+R + A + + + A DDRY +KV +H+ + A++ V+ + ++ + + D DV
Sbjct: 27 RRIKRAKIAKQKVQVFKPAIDDRYSIDKVVSHNGDNMHAIAIVKASDILTYAEEDTDVFA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + +A++GK V+ A LD F+ F L+ +AE V+KLTA+CM
Sbjct: 87 IDEIQFFDSEIVDIVKEIADSGKRVICAGLDMDFRGEPFGPTPELMAIAEFVDKLTAICM 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGNPATRTQRL 158
>gi|168014892|ref|XP_001759985.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688735|gb|EDQ75110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 19/177 (10%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-----KDI 73
+R+R+ A + +V+ KD+RY V +HD ++ V+ L K K I
Sbjct: 83 QRVRKEVDAGRKASLVKSDKDNRYAVSAVVSHDGIQMPCVAVPNLAKFRERVGEEAYKQI 142
Query: 74 DVIGIDEGQFFPDVVSFAESMANAG-KIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+VIGIDE QFF D++ F +S A+ K ++VA LDG F R F +L LIPLA+ V KL
Sbjct: 143 EVIGIDEAQFFDDLLEFCQSAADVDHKTIIVAGLDGDFLRRRFGFVLDLIPLADSVTKLH 202
Query: 133 AVCMSCFRDAAFT--KRIGQEKEVILG----------PMFSGKTT-ELIRRIRRYQY 176
A C C + A FT K + E EVI G FSGK E+ R + + +
Sbjct: 203 ARCELCNQPAPFTFRKTVDTETEVIGGVDVYMPVCRQHFFSGKNAVEIARSVLQIHH 259
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 94/206 (45%), Gaps = 54/206 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+VI+GPMF+GKTT L++R+R+ A + +V+ KD+RY V +HD ++ V+
Sbjct: 67 DVIVGPMFAGKTTALLQRVRKEVDAGRKASLVKSDKDNRYAVSAVVSHDGIQMPCVAVPN 126
Query: 213 LNKLIPHT-----KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
L K K I+VIGIDE QF
Sbjct: 127 LAKFRERVGEEAYKQIEVIGIDEAQF---------------------------------- 152
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAG-KIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
F D++ F +S A+ K ++VA LDG F R F +L LIPLA+ V K
Sbjct: 153 ------------FDDLLEFCQSAADVDHKTIIVAGLDGDFLRRRFGFVLDLIPLADSVTK 200
Query: 327 LTAVCMSCFRDAAFT--KRIGQEKEV 350
L A C C + A FT K + E EV
Sbjct: 201 LHARCELCNQPAPFTFRKTVDTETEV 226
>gi|255586437|ref|XP_002533863.1| thymidine kinase, putative [Ricinus communis]
gi|223526185|gb|EEF28513.1| thymidine kinase, putative [Ricinus communis]
Length = 234
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 97/227 (42%), Gaps = 52/227 (22%)
Query: 132 TAVCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR 191
+++ M+ D + E VI+GPMF+GKTT L+RRI +++ +KD R
Sbjct: 6 SSISMTSSIDGDGHNKPAGEVHVIVGPMFAGKTTALLRRINSEGSNGRNVAMIKSSKDTR 65
Query: 192 YDTEKVSTHDQQKLTAVSAVELNKL---IPHT--KDIDVIGIDEGQFVEVIGGSDKYMAV 246
Y + V THD K + +L+ + H + IDVIGIDE QF
Sbjct: 66 YARDSVVTHDGLKFPCWALPDLSSFRDKLGHDAYQRIDVIGIDEAQF------------- 112
Query: 247 CRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGT 305
F D+ F A+ GK V+VA LDG
Sbjct: 113 ---------------------------------FEDLYDFCSKAADHDGKTVIVAGLDGD 139
Query: 306 FQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
+ R F +L +IPLA+ V KLTA C C + A FT R E + +
Sbjct: 140 YLRRSFGSVLDVIPLADNVTKLTARCELCGKRAFFTLRKTAETQTEL 186
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL---IPHT--KDI 73
RRI +++ +KD RY + V THD K + +L+ + H + I
Sbjct: 43 RRINSEGSNGRNVAMIKSSKDTRYARDSVVTHDGLKFPCWALPDLSSFRDKLGHDAYQRI 102
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLA+ V KLT
Sbjct: 103 DVIGIDEAQFFEDLYDFCSKAADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADNVTKLT 162
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C + A FT R E + L
Sbjct: 163 ARCELCGKRAFFTLRKTAETQTEL 186
>gi|116791368|gb|ABK25955.1| unknown [Picea sitchensis]
Length = 219
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 94/205 (45%), Gaps = 53/205 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E +ILGPMF+GKTT LIR+++ R ++V+ KD RY V +HD K+ +
Sbjct: 11 EIHLILGPMFAGKTTALIRKMQAEIQMGRRVVLVKSDKDTRYALNSVVSHDGAKMPCWAV 70
Query: 211 VEL----NKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L +KL K +DVIGIDE QF
Sbjct: 71 ADLASFKDKLGEEAYKQLDVIGIDEAQF-------------------------------- 98
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ SF + A+ GK V+VA LDG + R F L LIP+A V
Sbjct: 99 --------------FKDLYSFCQVAADKDGKTVIVAGLDGDYLRKSFGSTLELIPIANSV 144
Query: 325 EKLTAVCMSCFRDAAFT-KRIGQEK 348
KLT+ C C + A+FT ++ G+ K
Sbjct: 145 VKLTSRCELCGKAASFTFRKTGETK 169
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 30 RCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHT-KDIDVIGIDEGQFF 84
R ++V+ KD RY V +HD K+ + +L +KL K +DVIGIDE QFF
Sbjct: 40 RVVLVKSDKDTRYALNSVVSHDGAKMPCWAVADLASFKDKLGEEAYKQLDVIGIDEAQFF 99
Query: 85 PDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAA 143
D+ SF + A+ GK V+VA LDG + R F L LIP+A V KLT+ C C + A+
Sbjct: 100 KDLYSFCQVAADKDGKTVIVAGLDGDYLRKSFGSTLELIPIANSVVKLTSRCELCGKAAS 159
Query: 144 FT-KRIGQEKEVILG 157
FT ++ G+ K ++G
Sbjct: 160 FTFRKTGETKTEVVG 174
>gi|229033964|ref|ZP_04188917.1| Thymidine kinase [Bacillus cereus AH1271]
gi|228728339|gb|EEL79362.1| Thymidine kinase [Bacillus cereus AH1271]
Length = 194
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFTHVTEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFTHVTEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|168023713|ref|XP_001764382.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684534|gb|EDQ70936.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 196
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 78/147 (53%), Gaps = 8/147 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-----KDI 73
+RIR A R +V+ KD+RY V +HD ++ V+ L H K +
Sbjct: 20 QRIREEADAGRRVSLVKSDKDNRYAVSAVVSHDGVQMPCVAVPTLASFREHVGEEAYKQM 79
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+VIGIDE QFF D++ F + A+ K V+VA LDG F R F L LIPLA+ V KL
Sbjct: 80 EVIGIDESQFFDDLLEFCQGAADLDNKTVIVAGLDGDFLRRRFGSALDLIPLADSVTKLH 139
Query: 133 AVCMSCFRDAAFT--KRIGQEKEVILG 157
A C C + A FT K + E EVI G
Sbjct: 140 ARCELCNQPAPFTFRKTVDTETEVIGG 166
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 90/206 (43%), Gaps = 54/206 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
VI+GPMF+GKTT L++RIR A R +V+ KD+RY V +HD ++ V+
Sbjct: 4 HVIIGPMFAGKTTALLQRIREEADAGRRVSLVKSDKDNRYAVSAVVSHDGVQMPCVAVPT 63
Query: 213 LNKLIPHT-----KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
L H K ++VIGIDE QF
Sbjct: 64 LASFREHVGEEAYKQMEVIGIDESQF---------------------------------- 89
Query: 268 ENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
F D++ F + A+ K V+VA LDG F R F L LIPLA+ V K
Sbjct: 90 ------------FDDLLEFCQGAADLDNKTVIVAGLDGDFLRRRFGSALDLIPLADSVTK 137
Query: 327 LTAVCMSCFRDAAFT--KRIGQEKEV 350
L A C C + A FT K + E EV
Sbjct: 138 LHARCELCNQPAPFTFRKTVDTETEV 163
>gi|313768402|ref|YP_004062082.1| hypothetical protein MpV1_199c [Micromonas sp. RCC1109 virus MpV1]
gi|312599098|gb|ADQ91122.1| hypothetical protein MpV1_199c [Micromonas sp. RCC1109 virus MpV1]
Length = 176
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 52/204 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+G MFSGKT+ELIRR++R + + + ++V AKD R E + THD K +L
Sbjct: 5 IIMGNMFSGKTSELIRRLKRLKVIDKQILVVNSAKDTRSPEEVLKTHDNVKFNCFKVYDL 64
Query: 214 NKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L+ + +D ++I IDE QF
Sbjct: 65 YDLMDKSAFEDAEIIAIDEAQF-------------------------------------- 86
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDG-TFQRTGFNDILSLIPLAECVEKLTAV 330
FP++ F ES + GK V++A LDG FQR + ++L IP+A V KL+A+
Sbjct: 87 --------FPNLKKFVESCLDMGKDVILAGLDGDAFQRK-WGELLDCIPMATEVTKLSAL 137
Query: 331 CMSCFRD--AAFTKRIGQEKEVRI 352
CM C FTKR + E+ +
Sbjct: 138 CMRCGNGNMGPFTKRTVENTELEL 161
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDIDVI 76
RR++R + + + ++V AKD R E + THD K +L L+ + +D ++I
Sbjct: 20 RRLKRLKVIDKQILVVNSAKDTRSPEEVLKTHDNVKFNCFKVYDLYDLMDKSAFEDAEII 79
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDG-TFQRTGFNDILSLIPLAECVEKLTAVC 135
IDE QFFP++ F ES + GK V++A LDG FQR + ++L IP+A V KL+A+C
Sbjct: 80 AIDEAQFFPNLKKFVESCLDMGKDVILAGLDGDAFQRK-WGELLDCIPMATEVTKLSALC 138
Query: 136 MSCFRD--AAFTKRIGQEKEVIL 156
M C FTKR + E+ L
Sbjct: 139 MRCGNGNMGPFTKRTVENTELEL 161
>gi|358053645|ref|ZP_09147381.1| thymidine kinase [Staphylococcus simiae CCM 7213]
gi|357256832|gb|EHJ07153.1| thymidine kinase [Staphylococcus simiae CCM 7213]
Length = 199
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + AV+
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAVNISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H D+DVIGIDE QF +
Sbjct: 71 AREIMMHDLSDVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V+ AE +++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVNIAERLSSDGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLIDGKPAKID 167
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + AV+ +++ H D+DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAVNISSAREIMMHDLSDVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ AE +++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVNIAERLSSDGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|404417809|ref|ZP_10999595.1| thymidine kinase [Staphylococcus arlettae CVD059]
gi|403489821|gb|EJY95380.1| thymidine kinase [Staphylococcus arlettae CVD059]
Length = 199
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY +K+ +H+ + A++
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINITT 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF E
Sbjct: 71 ASEILRHDLSEVDVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+VV+ AE +A G V+ A LD F+ F I L+ ++E V KL AVC
Sbjct: 95 ---------DEVVNIAEQLAARGHRVITAGLDMDFRGKPFKPIPELLAVSEVVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGASSSRTQRLIDGKPAKID 167
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY +K+ +H+ + A++ ++++ H ++DV
Sbjct: 25 LIRRLRRGVYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINITTASEILRHDLSEVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D VV+ AE +A G V+ A LD F+ F I L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFEDEVVNIAEQLAARGHRVITAGLDMDFRGKPFKPIPELLAVSEVVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGASSSRTQRL 158
>gi|423399828|ref|ZP_17377001.1| thymidine kinase [Bacillus cereus BAG2X1-2]
gi|423451419|ref|ZP_17428272.1| thymidine kinase [Bacillus cereus BAG5X1-1]
gi|423479480|ref|ZP_17456195.1| thymidine kinase [Bacillus cereus BAG6X1-1]
gi|423484643|ref|ZP_17461332.1| thymidine kinase [Bacillus cereus BAG6X1-2]
gi|423670879|ref|ZP_17645908.1| thymidine kinase [Bacillus cereus VDM034]
gi|423672894|ref|ZP_17647833.1| thymidine kinase [Bacillus cereus VDM062]
gi|401138104|gb|EJQ45679.1| thymidine kinase [Bacillus cereus BAG6X1-2]
gi|401145748|gb|EJQ53270.1| thymidine kinase [Bacillus cereus BAG5X1-1]
gi|401295166|gb|EJS00791.1| thymidine kinase [Bacillus cereus VDM034]
gi|401310994|gb|EJS16302.1| thymidine kinase [Bacillus cereus VDM062]
gi|401657332|gb|EJS74843.1| thymidine kinase [Bacillus cereus BAG2X1-2]
gi|402425784|gb|EJV57930.1| thymidine kinase [Bacillus cereus BAG6X1-1]
Length = 194
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHVTEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHVTEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|229118826|ref|ZP_04248175.1| Thymidine kinase [Bacillus cereus Rock1-3]
gi|423376874|ref|ZP_17354158.1| thymidine kinase [Bacillus cereus BAG1O-2]
gi|423449869|ref|ZP_17426748.1| thymidine kinase [Bacillus cereus BAG5O-1]
gi|423463042|ref|ZP_17439810.1| thymidine kinase [Bacillus cereus BAG6O-1]
gi|423542334|ref|ZP_17518724.1| thymidine kinase [Bacillus cereus HuB4-10]
gi|423548564|ref|ZP_17524922.1| thymidine kinase [Bacillus cereus HuB5-5]
gi|423621629|ref|ZP_17597407.1| thymidine kinase [Bacillus cereus VD148]
gi|228664627|gb|EEL20120.1| Thymidine kinase [Bacillus cereus Rock1-3]
gi|401127558|gb|EJQ35277.1| thymidine kinase [Bacillus cereus BAG5O-1]
gi|401168781|gb|EJQ76036.1| thymidine kinase [Bacillus cereus HuB4-10]
gi|401174937|gb|EJQ82141.1| thymidine kinase [Bacillus cereus HuB5-5]
gi|401262927|gb|EJR69061.1| thymidine kinase [Bacillus cereus VD148]
gi|401639968|gb|EJS57701.1| thymidine kinase [Bacillus cereus BAG1O-2]
gi|402422373|gb|EJV54611.1| thymidine kinase [Bacillus cereus BAG6O-1]
Length = 195
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 STCGSPASRTQRL 158
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 TCGSPASRTQRL 158
>gi|293366083|ref|ZP_06612771.1| thymidine kinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417660240|ref|ZP_12309829.1| thymidine kinase [Staphylococcus epidermidis VCU045]
gi|417908980|ref|ZP_12552730.1| thymidine kinase [Staphylococcus epidermidis VCU037]
gi|418613173|ref|ZP_13176189.1| thymidine kinase [Staphylococcus epidermidis VCU117]
gi|418617884|ref|ZP_13180770.1| thymidine kinase [Staphylococcus epidermidis VCU120]
gi|418627654|ref|ZP_13190226.1| thymidine kinase [Staphylococcus epidermidis VCU126]
gi|418629949|ref|ZP_13192442.1| thymidine kinase [Staphylococcus epidermidis VCU127]
gi|420182090|ref|ZP_14688232.1| thymidine kinase [Staphylococcus epidermidis NIHLM049]
gi|420195936|ref|ZP_14701720.1| thymidine kinase [Staphylococcus epidermidis NIHLM021]
gi|420215231|ref|ZP_14720502.1| thymidine kinase [Staphylococcus epidermidis NIH05005]
gi|420216736|ref|ZP_14721934.1| thymidine kinase [Staphylococcus epidermidis NIH05001]
gi|420223649|ref|ZP_14728544.1| thymidine kinase [Staphylococcus epidermidis NIH08001]
gi|420226178|ref|ZP_14731000.1| thymidine kinase [Staphylococcus epidermidis NIH06004]
gi|420230978|ref|ZP_14735655.1| thymidine kinase [Staphylococcus epidermidis NIH04003]
gi|420236014|ref|ZP_14740545.1| thymidine kinase [Staphylococcus epidermidis NIH051475]
gi|291319806|gb|EFE60164.1| thymidine kinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329734157|gb|EGG70475.1| thymidine kinase [Staphylococcus epidermidis VCU045]
gi|341654620|gb|EGS78359.1| thymidine kinase [Staphylococcus epidermidis VCU037]
gi|374816609|gb|EHR80810.1| thymidine kinase [Staphylococcus epidermidis VCU117]
gi|374817145|gb|EHR81331.1| thymidine kinase [Staphylococcus epidermidis VCU120]
gi|374829100|gb|EHR92914.1| thymidine kinase [Staphylococcus epidermidis VCU126]
gi|374832468|gb|EHR96178.1| thymidine kinase [Staphylococcus epidermidis VCU127]
gi|394250554|gb|EJD95736.1| thymidine kinase [Staphylococcus epidermidis NIHLM049]
gi|394262537|gb|EJE07299.1| thymidine kinase [Staphylococcus epidermidis NIHLM021]
gi|394282511|gb|EJE26704.1| thymidine kinase [Staphylococcus epidermidis NIH05005]
gi|394287147|gb|EJE31114.1| thymidine kinase [Staphylococcus epidermidis NIH08001]
gi|394291415|gb|EJE35227.1| thymidine kinase [Staphylococcus epidermidis NIH05001]
gi|394292664|gb|EJE36404.1| thymidine kinase [Staphylococcus epidermidis NIH06004]
gi|394295861|gb|EJE39497.1| thymidine kinase [Staphylococcus epidermidis NIH04003]
gi|394301650|gb|EJE45105.1| thymidine kinase [Staphylococcus epidermidis NIH051475]
Length = 199
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++++VIGIDE QF E
Sbjct: 71 AQEILNHMLEEVNVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V+ E +A G V+VA LD F+ F + L+ ++E + KL AVC
Sbjct: 95 ---------DDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ ++ A++ +++ H ++++V
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHMLEEVNV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ E +A G V+VA LD F+ F + L+ ++E + KL AV
Sbjct: 85 IGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158
>gi|242241526|ref|ZP_04795971.1| thymidine kinase [Staphylococcus epidermidis W23144]
gi|416128251|ref|ZP_11597256.1| thymidine kinase [Staphylococcus epidermidis FRI909]
gi|418614620|ref|ZP_13177583.1| thymidine kinase [Staphylococcus epidermidis VCU118]
gi|418632441|ref|ZP_13194872.1| thymidine kinase [Staphylococcus epidermidis VCU128]
gi|418633584|ref|ZP_13195992.1| thymidine kinase [Staphylococcus epidermidis VCU129]
gi|420174287|ref|ZP_14680740.1| thymidine kinase [Staphylococcus epidermidis NIHLM061]
gi|420178548|ref|ZP_14684878.1| thymidine kinase [Staphylococcus epidermidis NIHLM057]
gi|420181342|ref|ZP_14687545.1| thymidine kinase [Staphylococcus epidermidis NIHLM053]
gi|420191023|ref|ZP_14696960.1| thymidine kinase [Staphylococcus epidermidis NIHLM037]
gi|420193552|ref|ZP_14699403.1| thymidine kinase [Staphylococcus epidermidis NIHLM023]
gi|420200810|ref|ZP_14706450.1| thymidine kinase [Staphylococcus epidermidis NIHLM031]
gi|420204946|ref|ZP_14710484.1| thymidine kinase [Staphylococcus epidermidis NIHLM015]
gi|242235069|gb|EES37380.1| thymidine kinase [Staphylococcus epidermidis W23144]
gi|319399601|gb|EFV87856.1| thymidine kinase [Staphylococcus epidermidis FRI909]
gi|374819510|gb|EHR83632.1| thymidine kinase [Staphylococcus epidermidis VCU118]
gi|374832348|gb|EHR96063.1| thymidine kinase [Staphylococcus epidermidis VCU128]
gi|374838922|gb|EHS02455.1| thymidine kinase [Staphylococcus epidermidis VCU129]
gi|394245221|gb|EJD90538.1| thymidine kinase [Staphylococcus epidermidis NIHLM061]
gi|394246271|gb|EJD91532.1| thymidine kinase [Staphylococcus epidermidis NIHLM057]
gi|394246690|gb|EJD91944.1| thymidine kinase [Staphylococcus epidermidis NIHLM053]
gi|394258121|gb|EJE03013.1| thymidine kinase [Staphylococcus epidermidis NIHLM037]
gi|394259819|gb|EJE04650.1| thymidine kinase [Staphylococcus epidermidis NIHLM023]
gi|394267554|gb|EJE12141.1| thymidine kinase [Staphylococcus epidermidis NIHLM031]
gi|394271667|gb|EJE16156.1| thymidine kinase [Staphylococcus epidermidis NIHLM015]
Length = 199
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++++VIGIDE QF E
Sbjct: 71 AQEILNHKLEEVNVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V+ E +A G V+VA LD F+ F + L+ ++E + KL AVC
Sbjct: 95 ---------DDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ ++ A++ +++ H ++++V
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ E +A G V+VA LD F+ F + L+ ++E + KL AV
Sbjct: 85 IGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158
>gi|423618968|ref|ZP_17594801.1| thymidine kinase [Bacillus cereus VD115]
gi|401252444|gb|EJR58705.1| thymidine kinase [Bacillus cereus VD115]
Length = 195
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|449443536|ref|XP_004139533.1| PREDICTED: thymidine kinase-like [Cucumis sativus]
Length = 244
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 91/207 (43%), Gaps = 50/207 (24%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VILGPMF+GKTT L+RRI+ I++ KD RY + + THD KL +
Sbjct: 43 EIHVILGPMFAGKTTTLLRRIQSESCNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWAI 102
Query: 211 VELN----KLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
L+ K + D +DVIGIDE QF + D Y C
Sbjct: 103 PNLSSFKKKFGQGSYDKLDVIGIDEAQFFD-----DLYDFCC------------------ 139
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
E A ++ GK V+VA LD R F +L +IPLA+ V
Sbjct: 140 --EAADID--------------------GKTVIVAGLDXXXXRRNFGSVLDIIPLADSVT 177
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C A FT R QEKE +
Sbjct: 178 KLTARCEICGNRAFFTLRKTQEKETEL 204
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELN----KLIPHTKD-I 73
RRI+ I++ KD RY + + THD KL + L+ K + D +
Sbjct: 61 RRIQSESCNGRSVAIIKSNKDTRYGLDSIVTHDGMKLPCWAIPNLSSFKKKFGQGSYDKL 120
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK V+VA LD R F +L +IPLA+ V KLT
Sbjct: 121 DVIGIDEAQFFDDLYDFCCEAADIDGKTVIVAGLDXXXXRRNFGSVLDIIPLADSVTKLT 180
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C A FT R QEKE L
Sbjct: 181 ARCEICGNRAFFTLRKTQEKETEL 204
>gi|407707803|ref|YP_006831388.1| Nucleoid occlusion protein [Bacillus thuringiensis MC28]
gi|407385488|gb|AFU15989.1| Thymidine kinase [Bacillus thuringiensis MC28]
Length = 195
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|159109869|ref|XP_001705197.1| Thymidine kinase [Giardia lamblia ATCC 50803]
gi|157433278|gb|EDO77523.1| Thymidine kinase [Giardia lamblia ATCC 50803]
Length = 392
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Query: 23 RYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQ 82
R A+ R ++V++ D RYD + THD ++ A AV L +L D D + +DEGQ
Sbjct: 25 RLVAAHKRVLVVKHTFDTRYDDNSLTTHDNTRIAAKRAVLLGELATEFGDYDALIVDEGQ 84
Query: 83 FFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 142
FF D+VS + + G V V+AL G F+R F I L PLA + +A+C C A
Sbjct: 85 FFADIVSGVQDALSKGLYVYVSALSGNFKREPFELIPRLFPLASAIYLRSAICAICHAPA 144
Query: 143 AFTKRI-GQEKEVILG 157
F+ R Q +E+++G
Sbjct: 145 PFSARFSAQTEEIVIG 160
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 85/196 (43%), Gaps = 46/196 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+ILGPMF+GK+TEL+ R A+ R ++V++ D RYD ++THD ++ A AV L
Sbjct: 6 LILGPMFAGKSTELVGIHARLVAAHKRVLVVKHTFDTRYDDNSLTTHDNTRIAAKRAVLL 65
Query: 214 NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
+L D D + +DEGQF
Sbjct: 66 GELATEFGDYDALIVDEGQF---------------------------------------- 85
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
F D+VS + + G V V+AL G F+R F I L PLA + +A+C
Sbjct: 86 ------FADIVSGVQDALSKGLYVYVSALSGNFKREPFELIPRLFPLASAIYLRSAICAI 139
Query: 334 CFRDAAFTKRIGQEKE 349
C A F+ R + E
Sbjct: 140 CHAPAPFSARFSAQTE 155
>gi|356575076|ref|XP_003555668.1| PREDICTED: thymidine kinase-like [Glycine max]
Length = 227
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 93/208 (44%), Gaps = 50/208 (24%)
Query: 150 QEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS 209
E VI+GPMF+GKTT L+RRI+ A +++ +KD RY + V THD K +
Sbjct: 22 SEVHVIIGPMFAGKTTALLRRIKSELNAANNVALLKSSKDTRYAIDSVVTHDGIKFPCWA 81
Query: 210 AVELNKLIPHTKD-----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+L + +DVIGIDE QF D Y C+
Sbjct: 82 LPDLLSFREKYGEDAYQKLDVIGIDEAQFF-----VDLYEFCCKA--------------- 121
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
A+E+ GK V+VA LDG + R F +L +IPLAE V
Sbjct: 122 -ADED------------------------GKTVIVAGLDGEYLRRSFGSVLHIIPLAESV 156
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R +++E +
Sbjct: 157 TKLTARCELCGKRAFFTLRKTEQRETEL 184
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-----I 73
RRI+ A +++ +KD RY + V THD K + +L + +
Sbjct: 41 RRIKSELNAANNVALLKSSKDTRYAIDSVVTHDGIKFPCWALPDLLSFREKYGEDAYQKL 100
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLAE V KLT
Sbjct: 101 DVIGIDEAQFFVDLYEFCCKAADEDGKTVIVAGLDGEYLRRSFGSVLHIIPLAESVTKLT 160
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A C C + A FT R +++E L
Sbjct: 161 ARCELCGKRAFFTLRKTEQRETEL 184
>gi|229105923|ref|ZP_04236547.1| Thymidine kinase [Bacillus cereus Rock3-28]
gi|228677497|gb|EEL31750.1| Thymidine kinase [Bacillus cereus Rock3-28]
Length = 195
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|420186328|ref|ZP_14692399.1| thymidine kinase [Staphylococcus epidermidis NIHLM040]
gi|394252545|gb|EJD97577.1| thymidine kinase [Staphylococcus epidermidis NIHLM040]
Length = 199
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++++VIGIDE QF E
Sbjct: 71 AQEILNHKLEEVNVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V+ E +A G V+VA LD F+ F + L+ ++E + KL AVC
Sbjct: 95 ---------DDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ ++ A++ +++ H ++++V
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ E +A G V+VA LD F+ F + L+ ++E + KL AV
Sbjct: 85 IGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158
>gi|229020550|ref|ZP_04177294.1| Thymidine kinase [Bacillus cereus AH1273]
gi|229026770|ref|ZP_04183102.1| Thymidine kinase [Bacillus cereus AH1272]
gi|423388373|ref|ZP_17365599.1| thymidine kinase [Bacillus cereus BAG1X1-3]
gi|423416759|ref|ZP_17393848.1| thymidine kinase [Bacillus cereus BAG3X2-1]
gi|228734493|gb|EEL85155.1| Thymidine kinase [Bacillus cereus AH1272]
gi|228740745|gb|EEL90999.1| Thymidine kinase [Bacillus cereus AH1273]
gi|401109321|gb|EJQ17246.1| thymidine kinase [Bacillus cereus BAG3X2-1]
gi|401643561|gb|EJS61258.1| thymidine kinase [Bacillus cereus BAG1X1-3]
Length = 194
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHVTEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRIRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHVTEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|27468635|ref|NP_765272.1| thymidine kinase [Staphylococcus epidermidis ATCC 12228]
gi|57867594|ref|YP_189290.1| thymidine kinase [Staphylococcus epidermidis RP62A]
gi|251812170|ref|ZP_04826643.1| thymidine kinase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876473|ref|ZP_06285339.1| thymidine kinase [Staphylococcus epidermidis SK135]
gi|417646853|ref|ZP_12296705.1| thymidine kinase [Staphylococcus epidermidis VCU144]
gi|417656875|ref|ZP_12306553.1| thymidine kinase [Staphylococcus epidermidis VCU028]
gi|417912468|ref|ZP_12556160.1| thymidine kinase [Staphylococcus epidermidis VCU105]
gi|417913845|ref|ZP_12557506.1| thymidine kinase [Staphylococcus epidermidis VCU109]
gi|418604059|ref|ZP_13167426.1| thymidine kinase [Staphylococcus epidermidis VCU041]
gi|418607528|ref|ZP_13170758.1| thymidine kinase [Staphylococcus epidermidis VCU057]
gi|418609405|ref|ZP_13172558.1| thymidine kinase [Staphylococcus epidermidis VCU065]
gi|418622350|ref|ZP_13185102.1| thymidine kinase [Staphylococcus epidermidis VCU123]
gi|418623905|ref|ZP_13186599.1| thymidine kinase [Staphylococcus epidermidis VCU125]
gi|418663746|ref|ZP_13225255.1| thymidine kinase [Staphylococcus epidermidis VCU081]
gi|419768514|ref|ZP_14294636.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-250]
gi|419771573|ref|ZP_14297624.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-K]
gi|420171720|ref|ZP_14678255.1| thymidine kinase [Staphylococcus epidermidis NIHLM070]
gi|420173644|ref|ZP_14680135.1| thymidine kinase [Staphylococcus epidermidis NIHLM067]
gi|420186951|ref|ZP_14692975.1| thymidine kinase [Staphylococcus epidermidis NIHLM039]
gi|420198056|ref|ZP_14703774.1| thymidine kinase [Staphylococcus epidermidis NIHLM020]
gi|420202832|ref|ZP_14708420.1| thymidine kinase [Staphylococcus epidermidis NIHLM018]
gi|420207940|ref|ZP_14713425.1| thymidine kinase [Staphylococcus epidermidis NIHLM008]
gi|420210299|ref|ZP_14715728.1| thymidine kinase [Staphylococcus epidermidis NIHLM003]
gi|420212555|ref|ZP_14717904.1| thymidine kinase [Staphylococcus epidermidis NIHLM001]
gi|420220978|ref|ZP_14725933.1| thymidine kinase [Staphylococcus epidermidis NIH04008]
gi|420228592|ref|ZP_14733341.1| thymidine kinase [Staphylococcus epidermidis NIH05003]
gi|420233584|ref|ZP_14738192.1| thymidine kinase [Staphylococcus epidermidis NIH051668]
gi|421608827|ref|ZP_16050039.1| thymidine kinase [Staphylococcus epidermidis AU12-03]
gi|38258102|sp|Q8CRM9.1|KITH_STAES RecName: Full=Thymidine kinase
gi|71153801|sp|Q5HMA3.1|KITH_STAEQ RecName: Full=Thymidine kinase
gi|27316182|gb|AAO05316.1|AE016749_262 thymidine kinase [Staphylococcus epidermidis ATCC 12228]
gi|57638252|gb|AAW55040.1| thymidine kinase [Staphylococcus epidermidis RP62A]
gi|251804267|gb|EES56924.1| thymidine kinase [Staphylococcus epidermidis BCM-HMP0060]
gi|281294725|gb|EFA87253.1| thymidine kinase [Staphylococcus epidermidis SK135]
gi|329726113|gb|EGG62585.1| thymidine kinase [Staphylococcus epidermidis VCU144]
gi|329735653|gb|EGG71936.1| thymidine kinase [Staphylococcus epidermidis VCU028]
gi|341650680|gb|EGS74496.1| thymidine kinase [Staphylococcus epidermidis VCU105]
gi|341654303|gb|EGS78050.1| thymidine kinase [Staphylococcus epidermidis VCU109]
gi|374404382|gb|EHQ75356.1| thymidine kinase [Staphylococcus epidermidis VCU057]
gi|374405855|gb|EHQ76766.1| thymidine kinase [Staphylococcus epidermidis VCU041]
gi|374407807|gb|EHQ78655.1| thymidine kinase [Staphylococcus epidermidis VCU065]
gi|374411284|gb|EHQ82001.1| thymidine kinase [Staphylococcus epidermidis VCU081]
gi|374826944|gb|EHR90819.1| thymidine kinase [Staphylococcus epidermidis VCU123]
gi|374829149|gb|EHR92962.1| thymidine kinase [Staphylococcus epidermidis VCU125]
gi|383359878|gb|EID37288.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-250]
gi|383361071|gb|EID38453.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-K]
gi|394236835|gb|EJD82338.1| thymidine kinase [Staphylococcus epidermidis NIHLM070]
gi|394239681|gb|EJD85116.1| thymidine kinase [Staphylococcus epidermidis NIHLM067]
gi|394256917|gb|EJE01841.1| thymidine kinase [Staphylococcus epidermidis NIHLM039]
gi|394264987|gb|EJE09653.1| thymidine kinase [Staphylococcus epidermidis NIHLM020]
gi|394269011|gb|EJE13556.1| thymidine kinase [Staphylococcus epidermidis NIHLM018]
gi|394274960|gb|EJE19355.1| thymidine kinase [Staphylococcus epidermidis NIHLM008]
gi|394276533|gb|EJE20871.1| thymidine kinase [Staphylococcus epidermidis NIHLM003]
gi|394279676|gb|EJE23979.1| thymidine kinase [Staphylococcus epidermidis NIHLM001]
gi|394285428|gb|EJE29507.1| thymidine kinase [Staphylococcus epidermidis NIH04008]
gi|394294626|gb|EJE38297.1| thymidine kinase [Staphylococcus epidermidis NIH05003]
gi|394299866|gb|EJE43394.1| thymidine kinase [Staphylococcus epidermidis NIH051668]
gi|406655480|gb|EKC81907.1| thymidine kinase [Staphylococcus epidermidis AU12-03]
Length = 199
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++++VIGIDE QF E
Sbjct: 71 AQEILNHKLEEVNVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V+ E +A G V+VA LD F+ F + L+ ++E + KL AVC
Sbjct: 95 ---------DDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ ++ A++ +++ H ++++V
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ E +A G V+VA LD F+ F + L+ ++E + KL AV
Sbjct: 85 IGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158
>gi|420166562|ref|ZP_14673246.1| thymidine kinase [Staphylococcus epidermidis NIHLM088]
gi|394233569|gb|EJD79170.1| thymidine kinase [Staphylococcus epidermidis NIHLM088]
Length = 199
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++++VIGIDE QF E
Sbjct: 71 AQEILNHKLEEVNVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V+ E +A G V+VA LD F+ F + L+ ++E + KL AVC
Sbjct: 95 ---------DDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ ++ A++ +++ H ++++V
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ E +A G V+VA LD F+ F + L+ ++E + KL AV
Sbjct: 85 IGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158
>gi|387789601|ref|YP_006254666.1| thymidine kinase [Solitalea canadensis DSM 3403]
gi|379652434|gb|AFD05490.1| thymidine kinase [Solitalea canadensis DSM 3403]
Length = 191
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT ELIRR++R Q A + I + A D RYD V +HD + +
Sbjct: 18 EVICGPMFSGKTEELIRRLKRAQIAKLKVEIFKPATDIRYDATAVVSHDLNSIQSTPIET 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ + + VIGIDE QF +
Sbjct: 78 SSAILLLSSNTQVIGIDEAQFFD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
E P+V + ++AN G V+VA LD F+ F I L+ +AE V K+TAVC+
Sbjct: 101 -----DELPNVCA---TLANKGIRVIVAGLDMDFKGNPFGPIPKLMAVAEFVTKITAVCV 152
Query: 333 SCFRDAAFTKRIGQEKE 349
C A+ + R+ + +E
Sbjct: 153 RCGAPASHSYRLVERQE 169
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q A + I + A D RYD V +HD + + + ++ + + VIGI
Sbjct: 34 RRLKRAQIAKLKVEIFKPATDIRYDATAVVSHDLNSIQSTPIETSSAILLLSSNTQVIGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D + + ++AN G V+VA LD F+ F I L+ +AE V K+TAVC+
Sbjct: 94 DEAQFFDDELPNVCATLANKGIRVIVAGLDMDFKGNPFGPIPKLMAVAEFVTKITAVCVR 153
Query: 138 CFRDAAFTKRIGQEKEVIL 156
C A+ + R+ + +E L
Sbjct: 154 CGAPASHSYRLVERQETFL 172
>gi|52140232|ref|YP_086599.1| thymidine kinase [Bacillus cereus E33L]
gi|228930338|ref|ZP_04093342.1| Thymidine kinase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228936615|ref|ZP_04099409.1| Thymidine kinase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|301056798|ref|YP_003795009.1| thymidine kinase [Bacillus cereus biovar anthracis str. CI]
gi|423554216|ref|ZP_17530542.1| thymidine kinase [Bacillus cereus ISP3191]
gi|60389923|sp|Q630R8.1|KITH_BACCZ RecName: Full=Thymidine kinase
gi|51973701|gb|AAU15251.1| thymidine kinase [Bacillus cereus E33L]
gi|228823050|gb|EEM68888.1| Thymidine kinase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228829324|gb|EEM74957.1| Thymidine kinase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|300378967|gb|ADK07871.1| thymidine kinase [Bacillus cereus biovar anthracis str. CI]
gi|401181355|gb|EJQ88506.1| thymidine kinase [Bacillus cereus ISP3191]
Length = 195
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFKHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|30265353|ref|NP_847730.1| thymidine kinase [Bacillus anthracis str. Ames]
gi|47530892|ref|YP_022241.1| thymidine kinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49188165|ref|YP_031418.1| thymidine kinase [Bacillus anthracis str. Sterne]
gi|165871331|ref|ZP_02215980.1| thymidine kinase [Bacillus anthracis str. A0488]
gi|167636687|ref|ZP_02394975.1| thymidine kinase [Bacillus anthracis str. A0442]
gi|170688194|ref|ZP_02879405.1| thymidine kinase [Bacillus anthracis str. A0465]
gi|170709372|ref|ZP_02899785.1| thymidine kinase [Bacillus anthracis str. A0389]
gi|177651935|ref|ZP_02934518.1| thymidine kinase [Bacillus anthracis str. A0174]
gi|227818093|ref|YP_002818102.1| thymidine kinase [Bacillus anthracis str. CDC 684]
gi|229094442|ref|ZP_04225514.1| Thymidine kinase [Bacillus cereus Rock3-42]
gi|229158892|ref|ZP_04286949.1| Thymidine kinase [Bacillus cereus ATCC 4342]
gi|229600608|ref|YP_002869545.1| thymidine kinase [Bacillus anthracis str. A0248]
gi|254686247|ref|ZP_05150106.1| thymidine kinase [Bacillus anthracis str. CNEVA-9066]
gi|254724242|ref|ZP_05186026.1| thymidine kinase [Bacillus anthracis str. A1055]
gi|254735258|ref|ZP_05192967.1| thymidine kinase [Bacillus anthracis str. Western North America
USA6153]
gi|254744461|ref|ZP_05202141.1| thymidine kinase [Bacillus anthracis str. Kruger B]
gi|254755799|ref|ZP_05207831.1| thymidine kinase [Bacillus anthracis str. Vollum]
gi|254762139|ref|ZP_05213985.1| thymidine kinase [Bacillus anthracis str. Australia 94]
gi|386739188|ref|YP_006212369.1| thymidine kinase [Bacillus anthracis str. H9401]
gi|421509507|ref|ZP_15956412.1| thymidine kinase [Bacillus anthracis str. UR-1]
gi|421640601|ref|ZP_16081182.1| thymidine kinase [Bacillus anthracis str. BF1]
gi|38372309|sp|Q81JX0.1|KITH_BACAN RecName: Full=Thymidine kinase
gi|254807836|sp|C3P292.1|KITH_BACAA RecName: Full=Thymidine kinase
gi|254807837|sp|C3LFK4.1|KITH_BACAC RecName: Full=Thymidine kinase
gi|30260031|gb|AAP29216.1| thymidine kinase [Bacillus anthracis str. Ames]
gi|47506040|gb|AAT34716.1| thymidine kinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49182092|gb|AAT57468.1| thymidine kinase [Bacillus anthracis str. Sterne]
gi|164712998|gb|EDR18526.1| thymidine kinase [Bacillus anthracis str. A0488]
gi|167527887|gb|EDR90709.1| thymidine kinase [Bacillus anthracis str. A0442]
gi|170125720|gb|EDS94634.1| thymidine kinase [Bacillus anthracis str. A0389]
gi|170667887|gb|EDT18639.1| thymidine kinase [Bacillus anthracis str. A0465]
gi|172082639|gb|EDT67703.1| thymidine kinase [Bacillus anthracis str. A0174]
gi|227006626|gb|ACP16369.1| thymidine kinase [Bacillus anthracis str. CDC 684]
gi|228624503|gb|EEK81273.1| Thymidine kinase [Bacillus cereus ATCC 4342]
gi|228688979|gb|EEL42806.1| Thymidine kinase [Bacillus cereus Rock3-42]
gi|229265016|gb|ACQ46653.1| thymidine kinase [Bacillus anthracis str. A0248]
gi|384389039|gb|AFH86700.1| Thymidine kinase [Bacillus anthracis str. H9401]
gi|401820484|gb|EJT19649.1| thymidine kinase [Bacillus anthracis str. UR-1]
gi|403392280|gb|EJY89535.1| thymidine kinase [Bacillus anthracis str. BF1]
Length = 194
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFKHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|42784502|ref|NP_981749.1| thymidine kinase [Bacillus cereus ATCC 10987]
gi|60390046|sp|Q72XC1.1|KITH_BACC1 RecName: Full=Thymidine kinase
gi|42740434|gb|AAS44357.1| thymidine kinase [Bacillus cereus ATCC 10987]
Length = 195
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|126031057|pdb|2J9R|A Chain A, Thymidine Kinase From B. Anthracis In Complex With Dt
Length = 214
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 31 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 90
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 91 SKDIFKHITEEMDVIAIDEVQFFD------------------------------------ 114
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 115 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 165
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 166 SACGSPASRTQRL 178
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 47 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIA 106
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 107 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 166
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 167 ACGSPASRTQRL 178
>gi|47570472|ref|ZP_00241105.1| thymidine kinase [Bacillus cereus G9241]
gi|218906508|ref|YP_002454342.1| thymidine kinase [Bacillus cereus AH820]
gi|228917939|ref|ZP_04081475.1| Thymidine kinase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228949051|ref|ZP_04111323.1| Thymidine kinase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229124834|ref|ZP_04254012.1| Thymidine kinase [Bacillus cereus 95/8201]
gi|226729734|sp|B7JHF2.1|KITH_BACC0 RecName: Full=Thymidine kinase
gi|47552868|gb|EAL11286.1| thymidine kinase [Bacillus cereus G9241]
gi|218536221|gb|ACK88619.1| thymidine kinase [Bacillus cereus AH820]
gi|228658625|gb|EEL14287.1| Thymidine kinase [Bacillus cereus 95/8201]
gi|228810624|gb|EEM56973.1| Thymidine kinase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228841736|gb|EEM86847.1| Thymidine kinase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 194
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|229176006|ref|ZP_04303502.1| Thymidine kinase [Bacillus cereus MM3]
gi|228607499|gb|EEK64825.1| Thymidine kinase [Bacillus cereus MM3]
Length = 194
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHVTEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHVTEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|49480415|ref|YP_039323.1| thymidine kinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118480365|ref|YP_897516.1| thymidine kinase [Bacillus thuringiensis str. Al Hakam]
gi|217962819|ref|YP_002341397.1| thymidine kinase [Bacillus cereus AH187]
gi|222098802|ref|YP_002532860.1| thymidine kinase [Bacillus cereus Q1]
gi|229142073|ref|ZP_04270598.1| Thymidine kinase [Bacillus cereus BDRD-ST26]
gi|229199456|ref|ZP_04326119.1| Thymidine kinase [Bacillus cereus m1293]
gi|300117844|ref|ZP_07055611.1| thymidine kinase [Bacillus cereus SJ1]
gi|375287354|ref|YP_005107793.1| thymidine kinase [Bacillus cereus NC7401]
gi|402554578|ref|YP_006595849.1| thymidine kinase [Bacillus cereus FRI-35]
gi|423355811|ref|ZP_17333435.1| thymidine kinase [Bacillus cereus IS075]
gi|423375117|ref|ZP_17352454.1| thymidine kinase [Bacillus cereus AND1407]
gi|423571877|ref|ZP_17548114.1| thymidine kinase [Bacillus cereus MSX-A12]
gi|423573018|ref|ZP_17549137.1| thymidine kinase [Bacillus cereus MSX-D12]
gi|423608326|ref|ZP_17584218.1| thymidine kinase [Bacillus cereus VD102]
gi|60390011|sp|Q6HAV3.1|KITH_BACHK RecName: Full=Thymidine kinase
gi|166220760|sp|A0RLB6.1|KITH_BACAH RecName: Full=Thymidine kinase
gi|226729737|sp|B7HY90.1|KITH_BACC7 RecName: Full=Thymidine kinase
gi|254807839|sp|B9IRW3.1|KITH_BACCQ RecName: Full=Thymidine kinase
gi|49331971|gb|AAT62617.1| thymidine kinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118419590|gb|ABK88009.1| thymidine kinase [Bacillus thuringiensis str. Al Hakam]
gi|217063013|gb|ACJ77263.1| thymidine kinase [Bacillus cereus AH187]
gi|221242861|gb|ACM15571.1| thymidine kinase [Bacillus cereus Q1]
gi|228584032|gb|EEK42187.1| Thymidine kinase [Bacillus cereus m1293]
gi|228641362|gb|EEK97668.1| Thymidine kinase [Bacillus cereus BDRD-ST26]
gi|298724708|gb|EFI65383.1| thymidine kinase [Bacillus cereus SJ1]
gi|358355881|dbj|BAL21053.1| thymidine kinase [Bacillus cereus NC7401]
gi|401081836|gb|EJP90109.1| thymidine kinase [Bacillus cereus IS075]
gi|401092994|gb|EJQ01115.1| thymidine kinase [Bacillus cereus AND1407]
gi|401199301|gb|EJR06205.1| thymidine kinase [Bacillus cereus MSX-A12]
gi|401216487|gb|EJR23199.1| thymidine kinase [Bacillus cereus MSX-D12]
gi|401238335|gb|EJR44776.1| thymidine kinase [Bacillus cereus VD102]
gi|401795788|gb|AFQ09647.1| thymidine kinase [Bacillus cereus FRI-35]
Length = 195
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|384183195|ref|YP_005568957.1| thymidine kinase [Bacillus thuringiensis serovar finitimus YBT-020]
gi|324329279|gb|ADY24539.1| thymidine kinase [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 195
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|379796443|ref|YP_005326444.1| thymidine kinase [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356873436|emb|CCE59775.1| thymidine kinase [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 199
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINIST 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++DVIGIDE QF +
Sbjct: 71 AREIMMHDLSNVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS AE +++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVSIAEKLSSNGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLIDGKPAKID 167
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ +++ H ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISTAREIMMHDLSNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS AE +++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVSIAEKLSSNGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|225867311|ref|YP_002752689.1| thymidine kinase [Bacillus cereus 03BB102]
gi|229187556|ref|ZP_04314696.1| Thymidine kinase [Bacillus cereus BGSC 6E1]
gi|254807838|sp|C1F0Q7.1|KITH_BACC3 RecName: Full=Thymidine kinase
gi|225788312|gb|ACO28529.1| thymidine kinase [Bacillus cereus 03BB102]
gi|228595923|gb|EEK53603.1| Thymidine kinase [Bacillus cereus BGSC 6E1]
Length = 195
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|229076545|ref|ZP_04209505.1| Thymidine kinase [Bacillus cereus Rock4-18]
gi|228706578|gb|EEL58791.1| Thymidine kinase [Bacillus cereus Rock4-18]
Length = 195
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPYIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPYIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|229099763|ref|ZP_04230688.1| Thymidine kinase [Bacillus cereus Rock3-29]
gi|423439971|ref|ZP_17416877.1| thymidine kinase [Bacillus cereus BAG4X2-1]
gi|423532398|ref|ZP_17508816.1| thymidine kinase [Bacillus cereus HuB2-9]
gi|228683652|gb|EEL37605.1| Thymidine kinase [Bacillus cereus Rock3-29]
gi|402421134|gb|EJV53399.1| thymidine kinase [Bacillus cereus BAG4X2-1]
gi|402464967|gb|EJV96654.1| thymidine kinase [Bacillus cereus HuB2-9]
Length = 195
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPYIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPYIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|163943018|ref|YP_001647902.1| thymidine kinase [Bacillus weihenstephanensis KBAB4]
gi|229014500|ref|ZP_04171618.1| Thymidine kinase [Bacillus mycoides DSM 2048]
gi|229064981|ref|ZP_04200279.1| Thymidine kinase [Bacillus cereus AH603]
gi|229136149|ref|ZP_04264902.1| Thymidine kinase [Bacillus cereus BDRD-ST196]
gi|229170039|ref|ZP_04297730.1| Thymidine kinase [Bacillus cereus AH621]
gi|423369294|ref|ZP_17346725.1| thymidine kinase [Bacillus cereus VD142]
gi|423490476|ref|ZP_17467158.1| thymidine kinase [Bacillus cereus BtB2-4]
gi|423496199|ref|ZP_17472843.1| thymidine kinase [Bacillus cereus CER057]
gi|423497007|ref|ZP_17473624.1| thymidine kinase [Bacillus cereus CER074]
gi|423513223|ref|ZP_17489753.1| thymidine kinase [Bacillus cereus HuA2-1]
gi|423519995|ref|ZP_17496476.1| thymidine kinase [Bacillus cereus HuA2-4]
gi|423520839|ref|ZP_17497312.1| thymidine kinase [Bacillus cereus HuA4-10]
gi|423557155|ref|ZP_17533458.1| thymidine kinase [Bacillus cereus MC67]
gi|423595491|ref|ZP_17571521.1| thymidine kinase [Bacillus cereus VD048]
gi|423597412|ref|ZP_17573412.1| thymidine kinase [Bacillus cereus VD078]
gi|423659818|ref|ZP_17634987.1| thymidine kinase [Bacillus cereus VDM022]
gi|229486313|sp|A9VSC8.1|KITH_BACWK RecName: Full=Thymidine kinase
gi|163865215|gb|ABY46274.1| Thymidine kinase [Bacillus weihenstephanensis KBAB4]
gi|228613386|gb|EEK70520.1| Thymidine kinase [Bacillus cereus AH621]
gi|228647308|gb|EEL03390.1| Thymidine kinase [Bacillus cereus BDRD-ST196]
gi|228716282|gb|EEL67994.1| Thymidine kinase [Bacillus cereus AH603]
gi|228746850|gb|EEL96735.1| Thymidine kinase [Bacillus mycoides DSM 2048]
gi|401078179|gb|EJP86497.1| thymidine kinase [Bacillus cereus VD142]
gi|401149584|gb|EJQ57052.1| thymidine kinase [Bacillus cereus CER057]
gi|401157262|gb|EJQ64662.1| thymidine kinase [Bacillus cereus HuA2-4]
gi|401163208|gb|EJQ70558.1| thymidine kinase [Bacillus cereus CER074]
gi|401179936|gb|EJQ87099.1| thymidine kinase [Bacillus cereus HuA4-10]
gi|401193526|gb|EJR00531.1| thymidine kinase [Bacillus cereus MC67]
gi|401221962|gb|EJR28569.1| thymidine kinase [Bacillus cereus VD048]
gi|401238944|gb|EJR45376.1| thymidine kinase [Bacillus cereus VD078]
gi|401303957|gb|EJS09516.1| thymidine kinase [Bacillus cereus VDM022]
gi|402429239|gb|EJV61327.1| thymidine kinase [Bacillus cereus BtB2-4]
gi|402445859|gb|EJV77725.1| thymidine kinase [Bacillus cereus HuA2-1]
Length = 194
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHVTEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SECGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHVTEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 ECGSPASRTQRL 158
>gi|423471494|ref|ZP_17448238.1| thymidine kinase [Bacillus cereus BAG6O-2]
gi|402431511|gb|EJV63576.1| thymidine kinase [Bacillus cereus BAG6O-2]
Length = 194
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSV 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHVTEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSVSKDIFNHVTEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|65317306|ref|ZP_00390265.1| COG1435: Thymidine kinase [Bacillus anthracis str. A2012]
Length = 194
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + B+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIBNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFKHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + B+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIBNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|228988556|ref|ZP_04148643.1| Thymidine kinase [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228771173|gb|EEM19652.1| Thymidine kinase [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 194
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVPA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVPASKDIFEHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|302775496|ref|XP_002971165.1| hypothetical protein SELMODRAFT_412008 [Selaginella moellendorffii]
gi|300161147|gb|EFJ27763.1| hypothetical protein SELMODRAFT_412008 [Selaginella moellendorffii]
Length = 204
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 82/146 (56%), Gaps = 7/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI----D 74
+RI+ A R +V+ KD RY + +H +K+ + L+ + ++ +
Sbjct: 11 QRIQAEADAGRRVALVKSDKDTRYGLGCIVSHSGKKMHCAAVASLSDFKSNKPELYAQAE 70
Query: 75 VIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+IGIDE QFF D++SF +S A+ GK ++VA LDG F R F L L+PLA+ V KL++
Sbjct: 71 IIGIDEAQFFDDLLSFCQSAADWDGKTLIVAGLDGDFLRQRFGSALDLVPLADSVTKLSS 130
Query: 134 VCMSCFRDAAFT--KRIGQEKEVILG 157
C C R AAFT K + KEVI G
Sbjct: 131 RCEICGRAAAFTFRKTDDRRKEVIGG 156
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 85/190 (44%), Gaps = 51/190 (26%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MF+GKTT L++RI+ A R +V+ KD RY + +H +K+ + L+
Sbjct: 1 MFAGKTTVLLQRIQAEADAGRRVALVKSDKDTRYGLGCIVSHSGKKMHCAAVASLSDFKS 60
Query: 219 HTKDI----DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ ++ ++IGIDE QF
Sbjct: 61 NKPELYAQAEIIGIDEAQF----------------------------------------- 79
Query: 275 PPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
F D++SF +S A+ GK ++VA LDG F R F L L+PLA+ V KL++ C
Sbjct: 80 -----FDDLLSFCQSAADWDGKTLIVAGLDGDFLRQRFGSALDLVPLADSVTKLSSRCEI 134
Query: 334 CFRDAAFTKR 343
C R AAFT R
Sbjct: 135 CGRAAAFTFR 144
>gi|262049286|ref|ZP_06022161.1| thymidine kinase [Staphylococcus aureus D30]
gi|259162651|gb|EEW47218.1| thymidine kinase [Staphylococcus aureus D30]
Length = 199
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 71 ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E ++ G+ V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVSIVEKLSADGRRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G+ V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVSIVEKLSADGRRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|258422881|ref|ZP_05685781.1| thymidine kinase [Staphylococcus aureus A9635]
gi|417891546|ref|ZP_12535608.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21200]
gi|418308970|ref|ZP_12920550.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21194]
gi|418889925|ref|ZP_13444053.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1524]
gi|257846905|gb|EEV70919.1| thymidine kinase [Staphylococcus aureus A9635]
gi|341851963|gb|EGS92865.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21200]
gi|365235972|gb|EHM76877.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21194]
gi|377751242|gb|EHT75175.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1524]
Length = 199
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 71 ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V+ E +++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVNIVEKLSSGGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ E +++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVNIVEKLSSGGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|308162539|gb|EFO64926.1| Thymidine kinase [Giardia lamblia P15]
Length = 392
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Query: 23 RYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQ 82
R A R ++V++ D RYD + THD K+ A AV L + D D + +DEGQ
Sbjct: 25 RLVAARKRVLVVKHTFDTRYDDSSLTTHDNTKIAAKRAVLLGEFAKEFGDYDALIVDEGQ 84
Query: 83 FFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 142
FF D+VS + + G V V+AL G F+R F I L PLA + +A+C C A
Sbjct: 85 FFADIVSGVQDALSKGLYVYVSALSGNFKREPFELIPRLFPLASAIYLRSAICAVCHAPA 144
Query: 143 AFTKRI-GQEKEVILG 157
F+ R Q +E+++G
Sbjct: 145 PFSARFSAQTEEIVIG 160
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 83/196 (42%), Gaps = 46/196 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+ILGPMF+GK+TEL+ R A R ++V++ D RYD ++THD K+ A AV L
Sbjct: 6 LILGPMFAGKSTELVGIHARLVAARKRVLVVKHTFDTRYDDSSLTTHDNTKIAAKRAVLL 65
Query: 214 NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
+ D D + +DEGQF
Sbjct: 66 GEFAKEFGDYDALIVDEGQF---------------------------------------- 85
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
F D+VS + + G V V+AL G F+R F I L PLA + +A+C
Sbjct: 86 ------FADIVSGVQDALSKGLYVYVSALSGNFKREPFELIPRLFPLASAIYLRSAICAV 139
Query: 334 CFRDAAFTKRIGQEKE 349
C A F+ R + E
Sbjct: 140 CHAPAPFSARFSAQTE 155
>gi|15925109|ref|NP_372643.1| thymidine kinase [Staphylococcus aureus subsp. aureus Mu50]
gi|15927693|ref|NP_375226.1| thymidine kinase [Staphylococcus aureus subsp. aureus N315]
gi|148268570|ref|YP_001247513.1| thymidine kinase [Staphylococcus aureus subsp. aureus JH9]
gi|150394634|ref|YP_001317309.1| thymidine kinase [Staphylococcus aureus subsp. aureus JH1]
gi|156980434|ref|YP_001442693.1| thymidine kinase [Staphylococcus aureus subsp. aureus Mu3]
gi|253315788|ref|ZP_04839001.1| thymidine kinase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006907|ref|ZP_05145508.2| thymidine kinase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257793877|ref|ZP_05642856.1| thymidine kinase [Staphylococcus aureus A9781]
gi|258407045|ref|ZP_05680195.1| thymidine kinase [Staphylococcus aureus A9763]
gi|258422067|ref|ZP_05684984.1| thymidine kinase [Staphylococcus aureus A9719]
gi|258433564|ref|ZP_05688637.1| thymidine kinase [Staphylococcus aureus A9299]
gi|258440459|ref|ZP_05690629.1| thymidine kinase [Staphylococcus aureus A8115]
gi|258445667|ref|ZP_05693845.1| thymidine kinase [Staphylococcus aureus A6300]
gi|258450121|ref|ZP_05698216.1| thymidine kinase [Staphylococcus aureus A6224]
gi|258453424|ref|ZP_05701406.1| thymidine kinase [Staphylococcus aureus A5937]
gi|269203755|ref|YP_003283024.1| thymidine kinase [Staphylococcus aureus subsp. aureus ED98]
gi|282894763|ref|ZP_06302989.1| thymidine kinase [Staphylococcus aureus A8117]
gi|282929043|ref|ZP_06336628.1| thymidine kinase [Staphylococcus aureus A10102]
gi|295407049|ref|ZP_06816851.1| thymidine kinase [Staphylococcus aureus A8819]
gi|296275402|ref|ZP_06857909.1| thymidine kinase [Staphylococcus aureus subsp. aureus MR1]
gi|297246048|ref|ZP_06929905.1| thymidine kinase [Staphylococcus aureus A8796]
gi|384865304|ref|YP_005750663.1| thymidine kinase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387151244|ref|YP_005742808.1| Thymidine kinase [Staphylococcus aureus 04-02981]
gi|415694102|ref|ZP_11455682.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS03]
gi|417651592|ref|ZP_12301352.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21172]
gi|417802256|ref|ZP_12449321.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21318]
gi|417893633|ref|ZP_12537658.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21201]
gi|418425288|ref|ZP_12998382.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS1]
gi|418428180|ref|ZP_13001169.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS2]
gi|418431066|ref|ZP_13003967.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|418434972|ref|ZP_13006823.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS4]
gi|418437739|ref|ZP_13009516.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS5]
gi|418440667|ref|ZP_13012354.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS6]
gi|418443643|ref|ZP_13015229.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS7]
gi|418446639|ref|ZP_13018101.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS8]
gi|418449725|ref|ZP_13021097.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS9]
gi|418452565|ref|ZP_13023887.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS10]
gi|418455520|ref|ZP_13026771.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|418458396|ref|ZP_13029587.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|418568172|ref|ZP_13132523.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21272]
gi|418638760|ref|ZP_13201043.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-3]
gi|418651984|ref|ZP_13213964.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-99]
gi|418663266|ref|ZP_13224788.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-122]
gi|418878976|ref|ZP_13433207.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|418881814|ref|ZP_13436026.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|418884445|ref|ZP_13438635.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1769]
gi|418887149|ref|ZP_13441292.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|418895714|ref|ZP_13449805.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1057]
gi|418915250|ref|ZP_13469217.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418920948|ref|ZP_13474876.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|418992036|ref|ZP_13539694.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|419783650|ref|ZP_14309434.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-M]
gi|424771944|ref|ZP_18199060.1| thymidine kinase [Staphylococcus aureus subsp. aureus CM05]
gi|443636409|ref|ZP_21120519.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21236]
gi|448745214|ref|ZP_21727077.1| thymidine kinase [Staphylococcus aureus KT/Y21]
gi|54037509|sp|P65231.1|KITH_STAAN RecName: Full=Thymidine kinase
gi|54041409|sp|P65230.1|KITH_STAAM RecName: Full=Thymidine kinase
gi|13701913|dbj|BAB43205.1| thymidine kinase [Staphylococcus aureus subsp. aureus N315]
gi|14247892|dbj|BAB58281.1| thymidine kinase [Staphylococcus aureus subsp. aureus Mu50]
gi|147741639|gb|ABQ49937.1| Thymidine kinase [Staphylococcus aureus subsp. aureus JH9]
gi|149947086|gb|ABR53022.1| Thymidine kinase [Staphylococcus aureus subsp. aureus JH1]
gi|156722569|dbj|BAF78986.1| thymidine kinase [Staphylococcus aureus subsp. aureus Mu3]
gi|257787849|gb|EEV26189.1| thymidine kinase [Staphylococcus aureus A9781]
gi|257841378|gb|EEV65822.1| thymidine kinase [Staphylococcus aureus A9763]
gi|257841967|gb|EEV66399.1| thymidine kinase [Staphylococcus aureus A9719]
gi|257849295|gb|EEV73274.1| thymidine kinase [Staphylococcus aureus A9299]
gi|257852528|gb|EEV76446.1| thymidine kinase [Staphylococcus aureus A8115]
gi|257855506|gb|EEV78443.1| thymidine kinase [Staphylococcus aureus A6300]
gi|257856595|gb|EEV79501.1| thymidine kinase [Staphylococcus aureus A6224]
gi|257864405|gb|EEV87151.1| thymidine kinase [Staphylococcus aureus A5937]
gi|262076045|gb|ACY12018.1| thymidine kinase [Staphylococcus aureus subsp. aureus ED98]
gi|282589349|gb|EFB94441.1| thymidine kinase [Staphylococcus aureus A10102]
gi|282762851|gb|EFC02985.1| thymidine kinase [Staphylococcus aureus A8117]
gi|285817783|gb|ADC38270.1| Thymidine kinase [Staphylococcus aureus 04-02981]
gi|294968074|gb|EFG44101.1| thymidine kinase [Staphylococcus aureus A8819]
gi|297177047|gb|EFH36302.1| thymidine kinase [Staphylococcus aureus A8796]
gi|312830471|emb|CBX35313.1| thymidine kinase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128790|gb|EFT84790.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS03]
gi|329726334|gb|EGG62802.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21172]
gi|334275001|gb|EGL93303.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21318]
gi|341854029|gb|EGS94903.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21201]
gi|371980440|gb|EHO97648.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21272]
gi|375020761|gb|EHS14277.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-3]
gi|375023066|gb|EHS16530.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-99]
gi|375034528|gb|EHS27689.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-122]
gi|377692889|gb|EHT17268.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1165]
gi|377693012|gb|EHT17389.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1057]
gi|377713278|gb|EHT37487.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1769]
gi|377721444|gb|EHT45576.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1096]
gi|377723878|gb|EHT47999.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1150]
gi|377729810|gb|EHT53893.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1213]
gi|377754693|gb|EHT78600.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377762493|gb|EHT86356.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC348]
gi|383364947|gb|EID42252.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-M]
gi|387716329|gb|EIK04388.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS2]
gi|387716739|gb|EIK04788.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS3a]
gi|387717084|gb|EIK05110.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS1]
gi|387723795|gb|EIK11511.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS4]
gi|387725366|gb|EIK12984.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS5]
gi|387728626|gb|EIK16110.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS6]
gi|387733425|gb|EIK20609.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS8]
gi|387734815|gb|EIK21967.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS7]
gi|387735106|gb|EIK22245.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS9]
gi|387742411|gb|EIK29229.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS10]
gi|387743047|gb|EIK29846.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS11a]
gi|387744191|gb|EIK30962.1| thymidine kinase [Staphylococcus aureus subsp. aureus VRS11b]
gi|402347531|gb|EJU82558.1| thymidine kinase [Staphylococcus aureus subsp. aureus CM05]
gi|408424068|emb|CCJ11479.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408426057|emb|CCJ13444.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408428045|emb|CCJ15408.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408430034|emb|CCJ27199.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408432021|emb|CCJ19336.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408434015|emb|CCJ21300.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408436008|emb|CCJ23268.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|408437991|emb|CCJ25234.1| Thymidine kinase [Staphylococcus aureus subsp. aureus ST228]
gi|443407788|gb|ELS66326.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21236]
gi|445561485|gb|ELY17687.1| thymidine kinase [Staphylococcus aureus KT/Y21]
Length = 199
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 71 ASEIMTHNLTNVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|423644493|ref|ZP_17620110.1| thymidine kinase [Bacillus cereus VD166]
gi|401270617|gb|EJR76637.1| thymidine kinase [Bacillus cereus VD166]
Length = 195
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|418932437|ref|ZP_13486265.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1750]
gi|377711519|gb|EHT35750.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1750]
Length = 183
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 9 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDV 68
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 69 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 128
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 129 CAVCGSSSSRTQRL 142
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 46/196 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++
Sbjct: 1 MFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMT 60
Query: 219 HT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPP 277
H ++DVIGIDE QF +
Sbjct: 61 HNLTNVDVIGIDEVQFFD------------------------------------------ 78
Query: 278 PEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRD 337
++VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC C
Sbjct: 79 ---DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSS 135
Query: 338 AAFTKRIGQEKEVRIE 353
++ T+R+ K +I+
Sbjct: 136 SSRTQRLINGKPAKID 151
>gi|242371610|ref|ZP_04817184.1| thymidine kinase [Staphylococcus epidermidis M23864:W1]
gi|242350677|gb|EES42278.1| thymidine kinase [Staphylococcus epidermidis M23864:W1]
Length = 199
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +HD ++ A++ +++ ++D+
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHDGNEIEAINISTAREILNQDLHNVDI 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ AE +A G VVVA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVNIAEQLAENGHRVVVAGLDMDFRGEPFEPMPKLLAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSPSSRTQRL 158
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +HD ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHDGNEIEAINIST 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ ++D+IGIDE QF +
Sbjct: 71 AREILNQDLHNVDIIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V+ AE +A G VVVA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVNIAEQLAENGHRVVVAGLDMDFRGEPFEPMPKLLAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 AVCGSPSSRTQRL 158
>gi|224086509|ref|XP_002307900.1| predicted protein [Populus trichocarpa]
gi|222853876|gb|EEE91423.1| predicted protein [Populus trichocarpa]
Length = 192
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 93/208 (44%), Gaps = 52/208 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+ R++ I++ KD+RY + V+THD KL +
Sbjct: 2 EIHVIVGPMFAGKTTTLLHRVQAEINDGRNVAIIKSNKDNRYGLDSVATHDGVKLPCCAL 61
Query: 211 VELN----KLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
L+ KL D +DVIGIDE QF
Sbjct: 62 PNLSSFRQKLGQDAYDQLDVIGIDEAQF-------------------------------- 89
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F +A+ GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 90 --------------FEDLYDFCREVADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSV 135
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KL+A C C + A FT R +E + +
Sbjct: 136 TKLSARCEICGKRAFFTLRKTEETQTEL 163
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELN----KLIPHTKD-IDVIGIDEGQFFPDV 87
I++ KD+RY + VATHD KL + L+ KL D +DVIGIDE QFF D+
Sbjct: 34 IIKSNKDNRYGLDSVATHDGVKLPCCALPNLSSFRQKLGQDAYDQLDVIGIDEAQFFEDL 93
Query: 88 VSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
F +A+ GK V+VA LDG + R F +L +IPLA+ V KL+A C C + A FT
Sbjct: 94 YDFCREVADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLSARCEICGKRAFFTL 153
Query: 147 RIGQEKEVIL 156
R +E + L
Sbjct: 154 RKTEETQTEL 163
>gi|30023361|ref|NP_834992.1| thymidine kinase [Bacillus cereus ATCC 14579]
gi|206970185|ref|ZP_03231138.1| thymidine kinase [Bacillus cereus AH1134]
gi|228924066|ref|ZP_04087342.1| Thymidine kinase [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228961594|ref|ZP_04123203.1| Thymidine kinase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229051001|ref|ZP_04194550.1| Thymidine kinase [Bacillus cereus AH676]
gi|229072797|ref|ZP_04205996.1| Thymidine kinase [Bacillus cereus F65185]
gi|229082545|ref|ZP_04215008.1| Thymidine kinase [Bacillus cereus Rock4-2]
gi|229112744|ref|ZP_04242277.1| Thymidine kinase [Bacillus cereus Rock1-15]
gi|229130580|ref|ZP_04259536.1| Thymidine kinase [Bacillus cereus BDRD-Cer4]
gi|229147871|ref|ZP_04276212.1| Thymidine kinase [Bacillus cereus BDRD-ST24]
gi|229153494|ref|ZP_04281672.1| Thymidine kinase [Bacillus cereus m1550]
gi|229181578|ref|ZP_04308904.1| Thymidine kinase [Bacillus cereus 172560W]
gi|229193582|ref|ZP_04320526.1| Thymidine kinase [Bacillus cereus ATCC 10876]
gi|296505755|ref|YP_003667455.1| thymidine kinase [Bacillus thuringiensis BMB171]
gi|365162711|ref|ZP_09358836.1| thymidine kinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410920|ref|ZP_17388040.1| thymidine kinase [Bacillus cereus BAG3O-2]
gi|423427421|ref|ZP_17404452.1| thymidine kinase [Bacillus cereus BAG3X2-2]
gi|423433295|ref|ZP_17410299.1| thymidine kinase [Bacillus cereus BAG4O-1]
gi|423438735|ref|ZP_17415716.1| thymidine kinase [Bacillus cereus BAG4X12-1]
gi|423583502|ref|ZP_17559613.1| thymidine kinase [Bacillus cereus VD014]
gi|423632651|ref|ZP_17608396.1| thymidine kinase [Bacillus cereus VD154]
gi|423633825|ref|ZP_17609478.1| thymidine kinase [Bacillus cereus VD156]
gi|423651172|ref|ZP_17626742.1| thymidine kinase [Bacillus cereus VD169]
gi|423658246|ref|ZP_17633545.1| thymidine kinase [Bacillus cereus VD200]
gi|38372297|sp|Q814U0.1|KITH_BACCR RecName: Full=Thymidine kinase
gi|29898922|gb|AAP12193.1| Thymidine kinase [Bacillus cereus ATCC 14579]
gi|87312647|gb|ABD37689.1| thymidine kinase [Bacillus cereus]
gi|206734762|gb|EDZ51931.1| thymidine kinase [Bacillus cereus AH1134]
gi|228589887|gb|EEK47762.1| Thymidine kinase [Bacillus cereus ATCC 10876]
gi|228601946|gb|EEK59441.1| Thymidine kinase [Bacillus cereus 172560W]
gi|228630098|gb|EEK86749.1| Thymidine kinase [Bacillus cereus m1550]
gi|228635521|gb|EEK92010.1| Thymidine kinase [Bacillus cereus BDRD-ST24]
gi|228652919|gb|EEL08801.1| Thymidine kinase [Bacillus cereus BDRD-Cer4]
gi|228670725|gb|EEL26036.1| Thymidine kinase [Bacillus cereus Rock1-15]
gi|228700977|gb|EEL53500.1| Thymidine kinase [Bacillus cereus Rock4-2]
gi|228710288|gb|EEL62263.1| Thymidine kinase [Bacillus cereus F65185]
gi|228722378|gb|EEL73774.1| Thymidine kinase [Bacillus cereus AH676]
gi|228798076|gb|EEM45080.1| Thymidine kinase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228835556|gb|EEM80921.1| Thymidine kinase [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|296326807|gb|ADH09735.1| thymidine kinase [Bacillus thuringiensis BMB171]
gi|363617876|gb|EHL69246.1| thymidine kinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401108760|gb|EJQ16690.1| thymidine kinase [Bacillus cereus BAG3X2-2]
gi|401109258|gb|EJQ17184.1| thymidine kinase [Bacillus cereus BAG3O-2]
gi|401112346|gb|EJQ20225.1| thymidine kinase [Bacillus cereus BAG4O-1]
gi|401115862|gb|EJQ23708.1| thymidine kinase [Bacillus cereus BAG4X12-1]
gi|401209562|gb|EJR16321.1| thymidine kinase [Bacillus cereus VD014]
gi|401259297|gb|EJR65473.1| thymidine kinase [Bacillus cereus VD154]
gi|401279450|gb|EJR85376.1| thymidine kinase [Bacillus cereus VD169]
gi|401282425|gb|EJR88325.1| thymidine kinase [Bacillus cereus VD156]
gi|401287976|gb|EJR93738.1| thymidine kinase [Bacillus cereus VD200]
Length = 195
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|326389248|ref|ZP_08210816.1| Thymidine kinase [Thermoanaerobacter ethanolicus JW 200]
gi|345016591|ref|YP_004818944.1| thymidine kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940163|ref|ZP_10305807.1| thymidine kinase [Thermoanaerobacter siderophilus SR4]
gi|325994611|gb|EGD53035.1| Thymidine kinase [Thermoanaerobacter ethanolicus JW 200]
gi|344031934|gb|AEM77660.1| Thymidine kinase [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291913|gb|EIW00357.1| thymidine kinase [Thermoanaerobacter siderophilus SR4]
Length = 193
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I+GPMFSGK+ ELIRRI+R Q A + + + A DDRY +KV +H+ + A+S V+
Sbjct: 12 EAIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAISVVK 71
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++I +D +VI IDE QF +
Sbjct: 72 ASEIIELLEEDTEVIAIDEIQFFD------------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+C
Sbjct: 96 ---------HSIVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDIMAIAESVDKLTAIC 146
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 147 VKCGNPATRTQRL 159
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDV 75
RRI+R Q A + + + A DDRY +KV +H+ + A+S V+ +++I + D +V
Sbjct: 26 LIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAISVVKASEIIELLEEDTEV 85
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF +V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+
Sbjct: 86 IAIDEIQFFDHSIVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDIMAIAESVDKLTAI 145
Query: 135 CMSCFRDAAFTKRI 148
C+ C A T+R+
Sbjct: 146 CVKCGNPATRTQRL 159
>gi|228955578|ref|ZP_04117580.1| Thymidine kinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|423506786|ref|ZP_17483375.1| thymidine kinase [Bacillus cereus HD73]
gi|449092394|ref|YP_007424835.1| Thymidine kinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228804106|gb|EEM50723.1| Thymidine kinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|402446284|gb|EJV78146.1| thymidine kinase [Bacillus cereus HD73]
gi|449026151|gb|AGE81314.1| Thymidine kinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 195
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|218232456|ref|YP_002370107.1| thymidine kinase [Bacillus cereus B4264]
gi|226729736|sp|B7HFM8.1|KITH_BACC4 RecName: Full=Thymidine kinase
gi|218160413|gb|ACK60405.1| thymidine kinase [Bacillus cereus B4264]
Length = 195
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|402846950|ref|ZP_10895259.1| putative thymidine kinase [Porphyromonas sp. oral taxon 279 str.
F0450]
gi|402267642|gb|EJU17037.1| putative thymidine kinase [Porphyromonas sp. oral taxon 279 str.
F0450]
Length = 196
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 45/198 (22%)
Query: 147 RIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLT 206
R+ EVI G MFSGKT EL+RR+RR + A R I + + D RYD +V +HD+ +
Sbjct: 11 RVRGSIEVICGSMFSGKTEELLRRLRRAKIAGLRVEIFKPSVDTRYDETEVVSHDRNAIA 70
Query: 207 AVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ + L+ D+DVIGIDE QF +
Sbjct: 71 STPIDNSSNLLLLASDVDVIGIDEAQFFD------------------------------- 99
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
P+VV E +A+ G +++A LD F+R F + L +A+ V+K
Sbjct: 100 -----------EHLPEVV---EQLADQGIRIILAGLDMDFRRQPFGPMAQLCAIADSVDK 145
Query: 327 LTAVCMSCFRDAAFTKRI 344
+ A+C+ C A ++ R+
Sbjct: 146 IHAICVGCGSWANYSYRL 163
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR + A R I + + D RYD +V +HD+ + + + L+ D+DVIGI
Sbjct: 33 RRLRRAKIAGLRVEIFKPSVDTRYDETEVVSHDRNAIASTPIDNSSNLLLLASDVDVIGI 92
Query: 79 DEGQFF----PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
DE QFF P+VV E +A+ G +++A LD F+R F + L +A+ V+K+ A+
Sbjct: 93 DEAQFFDEHLPEVV---EQLADQGIRIILAGLDMDFRRQPFGPMAQLCAIADSVDKIHAI 149
Query: 135 CMSCFRDAAFTKR-IGQEKEVILG 157
C+ C A ++ R + E++V+LG
Sbjct: 150 CVGCGSWANYSYRLVSGEQQVMLG 173
>gi|386729809|ref|YP_006196192.1| thymidine kinase [Staphylococcus aureus subsp. aureus 71193]
gi|418979398|ref|ZP_13527194.1| Thymidine kinase [Staphylococcus aureus subsp. aureus DR10]
gi|379992829|gb|EIA14279.1| Thymidine kinase [Staphylococcus aureus subsp. aureus DR10]
gi|384231102|gb|AFH70349.1| Thymidine kinase [Staphylococcus aureus subsp. aureus 71193]
Length = 206
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 18 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 77
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 78 ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 101
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 102 ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 152
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 153 AVCGSSSSRTQRLINGKPAKID 174
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 32 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 91
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 92 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 151
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 152 CAVCGSSSSRTQRL 165
>gi|126031066|pdb|2JA1|A Chain A, Thymidine Kinase From B. Cereus With Ttp Bound As
Phosphate Donor
Length = 197
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 13 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 72
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 73 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 97 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 147
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 148 SVCGSPASRTQRL 160
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 29 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 88
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 89 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 148
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 149 VCGSPASRTQRL 160
>gi|423589152|ref|ZP_17565238.1| thymidine kinase [Bacillus cereus VD045]
gi|401224391|gb|EJR30945.1| thymidine kinase [Bacillus cereus VD045]
Length = 195
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSDEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSDEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|423613470|ref|ZP_17589330.1| thymidine kinase [Bacillus cereus VD107]
gi|401241760|gb|EJR48140.1| thymidine kinase [Bacillus cereus VD107]
Length = 194
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHVTEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SECGSPASRTQRL 158
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHVTEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 ECGSPASRTQRL 158
>gi|359485880|ref|XP_003633348.1| PREDICTED: thymidine kinase-like [Vitis vinifera]
Length = 234
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 91/207 (43%), Gaps = 50/207 (24%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+RRI+ +++ +KD RY T+ + THD K +
Sbjct: 25 EVHVIVGPMFAGKTTALLRRIKSESNNGRNVAMIKSSKDTRYATDSIVTHDGVKFPCWAL 84
Query: 211 VELNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L+ + ++VIGIDE QF E D Y C
Sbjct: 85 PDLSSFRQKFGAEAYEKLEVIGIDEAQFFE-----DLYDFCC------------------ 121
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
E + GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 122 ----------------------EVADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVT 159
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R +E + +
Sbjct: 160 KLTARCELCGKRAFFTLRKIEEMQTEL 186
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDI 73
RRI+ +++ +KD RY T+ + THD K + +L+ + +
Sbjct: 43 RRIKSESNNGRNVAMIKSSKDTRYATDSIVTHDGVKFPCWALPDLSSFRQKFGAEAYEKL 102
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+VIGIDE QFF D+ F +A+ GK V+VA LDG + R F +L +IPLA+ V KLT
Sbjct: 103 EVIGIDEAQFFEDLYDFCCEVADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVTKLT 162
Query: 133 AVCMSCFRDAAFTKRIGQE--KEVILGPMFSGKTTELIRRIRRYQYANYRCMI--VRYAK 188
A C C + A FT R +E E+I G ++ + R Y N + +I R A
Sbjct: 163 ARCELCGKRAFFTLRKIEEMQTELIGG-------ADIYMPVCRQHYVNGQAVIEAARNAL 215
Query: 189 DDRYDTEKVSTHDQ 202
+ R D + H +
Sbjct: 216 ESRKDKVQSDPHPE 229
>gi|357462597|ref|XP_003601580.1| Thymidine kinase [Medicago truncatula]
gi|355490628|gb|AES71831.1| Thymidine kinase [Medicago truncatula]
Length = 226
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 14/187 (7%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL---IPHT--KDI 73
RRI+ +++ +KD+RY + V THD K + +L H + +
Sbjct: 36 RRIKSEVDNGRNVAMLKSSKDNRYAVDSVVTHDGIKFPCWALPDLMLFKDKYGHEAYQKL 95
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F A+ GKIVVVA LDG + R F +L +IP+A+ V KLT
Sbjct: 96 DVIGIDEAQFFEDLYDFCCKAADEDGKIVVVAGLDGDYMRRSFGSVLHIIPIADTVTKLT 155
Query: 133 AVCMSCFRDAAFT-KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR 191
A C C + A FT ++ G+++ ++G +L + R+ Y N + ++V A
Sbjct: 156 ARCELCGKRAFFTLRKTGEKQTELIG------GADLYMPVCRHHYVNGQ-VVVEAAMKSV 208
Query: 192 YDTEKVS 198
+ ++KV
Sbjct: 209 FGSQKVG 215
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 94/207 (45%), Gaps = 50/207 (24%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E + +GPMF+GKTT L+RRI+ +++ +KD+RY + V THD K +
Sbjct: 18 EIHLFVGPMFAGKTTSLLRRIKSEVDNGRNVAMLKSSKDNRYAVDSVVTHDGIKFPCWAL 77
Query: 211 VELNKL---IPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L H + +DVIGIDE QF E D Y C+
Sbjct: 78 PDLMLFKDKYGHEAYQKLDVIGIDEAQFFE-----DLYDFCCKA---------------- 116
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
A+E+ GKIVVVA LDG + R F +L +IP+A+ V
Sbjct: 117 ADED------------------------GKIVVVAGLDGDYMRRSFGSVLHIIPIADTVT 152
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R EK+ +
Sbjct: 153 KLTARCELCGKRAFFTLRKTGEKQTEL 179
>gi|295428706|ref|ZP_06821332.1| thymidine kinase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|295127376|gb|EFG57016.1| thymidine kinase [Staphylococcus aureus subsp. aureus EMRSA16]
Length = 203
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 15 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 74
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 75 ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 98
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 99 ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 149
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 150 AVCGSSSSRTQRLINGKPAKID 171
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 29 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 88
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 89 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 148
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 149 CAVCGSSSSRTQRL 162
>gi|21283772|ref|NP_646860.1| thymidine kinase [Staphylococcus aureus subsp. aureus MW2]
gi|49484343|ref|YP_041567.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA252]
gi|49486912|ref|YP_044133.1| thymidine kinase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57652141|ref|YP_186926.1| thymidine kinase [Staphylococcus aureus subsp. aureus COL]
gi|82751720|ref|YP_417461.1| thymidine kinase [Staphylococcus aureus RF122]
gi|87160651|ref|YP_494719.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196023|ref|YP_500836.1| thymidine kinase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151222235|ref|YP_001333057.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. Newman]
gi|161510324|ref|YP_001575983.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141638|ref|ZP_03566131.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|253731043|ref|ZP_04865208.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733047|ref|ZP_04867212.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257426258|ref|ZP_05602673.1| thymidine kinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428916|ref|ZP_05605310.1| thymidine kinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431525|ref|ZP_05607898.1| thymidine kinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257434234|ref|ZP_05610584.1| thymidine kinase [Staphylococcus aureus subsp. aureus E1410]
gi|257437147|ref|ZP_05613187.1| thymidine kinase [Staphylococcus aureus subsp. aureus M876]
gi|258453171|ref|ZP_05701162.1| thymidine kinase [Staphylococcus aureus A5948]
gi|262052621|ref|ZP_06024815.1| thymidine kinase [Staphylococcus aureus 930918-3]
gi|282904788|ref|ZP_06312662.1| thymidine kinase [Staphylococcus aureus subsp. aureus C160]
gi|282906463|ref|ZP_06314314.1| thymidine kinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282909432|ref|ZP_06317247.1| thymidine kinase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911684|ref|ZP_06319483.1| thymidine kinase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282914968|ref|ZP_06322748.1| thymidine kinase [Staphylococcus aureus subsp. aureus M899]
gi|282917468|ref|ZP_06325221.1| thymidine kinase [Staphylococcus aureus subsp. aureus D139]
gi|282920297|ref|ZP_06328021.1| thymidine kinase [Staphylococcus aureus subsp. aureus C427]
gi|282923107|ref|ZP_06330792.1| thymidine kinase [Staphylococcus aureus A9765]
gi|282925508|ref|ZP_06333162.1| thymidine kinase [Staphylococcus aureus subsp. aureus C101]
gi|283771287|ref|ZP_06344176.1| thymidine kinase [Staphylococcus aureus subsp. aureus H19]
gi|283958899|ref|ZP_06376344.1| thymidine kinase [Staphylococcus aureus subsp. aureus A017934/97]
gi|284025153|ref|ZP_06379551.1| thymidine kinase [Staphylococcus aureus subsp. aureus 132]
gi|293509036|ref|ZP_06667823.1| thymidine kinase [Staphylococcus aureus subsp. aureus 58-424]
gi|293510951|ref|ZP_06669650.1| thymidine kinase [Staphylococcus aureus subsp. aureus M809]
gi|293547553|ref|ZP_06672228.1| thymidine kinase [Staphylococcus aureus subsp. aureus M1015]
gi|294850089|ref|ZP_06790826.1| thymidine kinase [Staphylococcus aureus A9754]
gi|297210060|ref|ZP_06926453.1| thymidine kinase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297589814|ref|ZP_06948454.1| thymidine kinase [Staphylococcus aureus subsp. aureus MN8]
gi|300910423|ref|ZP_07127875.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH70]
gi|304379300|ref|ZP_07362039.1| thymidine kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|379015245|ref|YP_005291481.1| thymidine kinase [Staphylococcus aureus subsp. aureus VC40]
gi|379021795|ref|YP_005298457.1| thymidine kinase [Staphylococcus aureus subsp. aureus M013]
gi|384548344|ref|YP_005737597.1| thymidine kinase [Staphylococcus aureus subsp. aureus ED133]
gi|384550916|ref|YP_005740168.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384862771|ref|YP_005745491.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384866958|ref|YP_005747154.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH60]
gi|384870669|ref|YP_005753383.1| thymidine kinase [Staphylococcus aureus subsp. aureus T0131]
gi|385782359|ref|YP_005758530.1| thymidine kinase [Staphylococcus aureus subsp. aureus 11819-97]
gi|386831701|ref|YP_006238355.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387143834|ref|YP_005732228.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
TW20]
gi|387603398|ref|YP_005734919.1| thymidine kinase [Staphylococcus aureus subsp. aureus ST398]
gi|387781097|ref|YP_005755895.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
LGA251]
gi|404479400|ref|YP_006710830.1| thymidine kinase [Staphylococcus aureus 08BA02176]
gi|415684945|ref|ZP_11449974.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS00]
gi|415688361|ref|ZP_11452076.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS01]
gi|417650345|ref|ZP_12300117.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21189]
gi|417655390|ref|ZP_12305103.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21193]
gi|417795561|ref|ZP_12442781.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21305]
gi|417799449|ref|ZP_12446589.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21310]
gi|417887776|ref|ZP_12531896.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21195]
gi|417897523|ref|ZP_12541454.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21235]
gi|417900282|ref|ZP_12544172.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21266]
gi|417905619|ref|ZP_12549427.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21269]
gi|418277221|ref|ZP_12891835.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21178]
gi|418286665|ref|ZP_12899306.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21209]
gi|418311346|ref|ZP_12922871.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21331]
gi|418313989|ref|ZP_12925471.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21334]
gi|418315900|ref|ZP_12927352.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21340]
gi|418319281|ref|ZP_12930665.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21232]
gi|418320101|ref|ZP_12931465.1| thymidine kinase [Staphylococcus aureus subsp. aureus VCU006]
gi|418561980|ref|ZP_13126449.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21262]
gi|418565069|ref|ZP_13129489.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21264]
gi|418569946|ref|ZP_13134248.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21283]
gi|418572732|ref|ZP_13136938.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21333]
gi|418580042|ref|ZP_13144132.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1114]
gi|418582938|ref|ZP_13147011.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597007|ref|ZP_13160544.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21342]
gi|418599103|ref|ZP_13162599.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21343]
gi|418602192|ref|ZP_13165604.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21345]
gi|418641117|ref|ZP_13203331.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-24]
gi|418645516|ref|ZP_13207638.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-55]
gi|418646522|ref|ZP_13208624.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-88]
gi|418649161|ref|ZP_13211191.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-91]
gi|418655899|ref|ZP_13217731.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-105]
gi|418660182|ref|ZP_13221820.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-111]
gi|418871146|ref|ZP_13425533.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-125]
gi|418875983|ref|ZP_13430232.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC93]
gi|418892634|ref|ZP_13446744.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|418901507|ref|ZP_13455558.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|418904458|ref|ZP_13458495.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1770]
gi|418909945|ref|ZP_13463935.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG149]
gi|418912669|ref|ZP_13466646.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG547]
gi|418918166|ref|ZP_13472119.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|418923834|ref|ZP_13477745.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|418926532|ref|ZP_13480428.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG2018]
gi|418929462|ref|ZP_13483346.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1612]
gi|418935100|ref|ZP_13488916.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|418947883|ref|ZP_13500222.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-157]
gi|418952194|ref|ZP_13504233.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-160]
gi|418955741|ref|ZP_13507677.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-189]
gi|418983066|ref|ZP_13530770.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|418986689|ref|ZP_13534369.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|418989186|ref|ZP_13536854.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|419773817|ref|ZP_14299804.1| thymidine kinase [Staphylococcus aureus subsp. aureus CO-23]
gi|421150913|ref|ZP_15610564.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|422742973|ref|ZP_16796969.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA177]
gi|422745934|ref|ZP_16799869.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA131]
gi|424786108|ref|ZP_18212901.1| Thymidine kinase [Staphylococcus aureus CN79]
gi|440707630|ref|ZP_20888321.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21282]
gi|440735481|ref|ZP_20915086.1| thymidine kinase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|443638700|ref|ZP_21122734.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21196]
gi|448742216|ref|ZP_21724168.1| thymidine kinase [Staphylococcus aureus KT/314250]
gi|38258186|sp|Q8NVG5.1|KITH_STAAW RecName: Full=Thymidine kinase
gi|56748954|sp|Q6G7J1.1|KITH_STAAS RecName: Full=Thymidine kinase
gi|56749008|sp|Q6GEV6.1|KITH_STAAR RecName: Full=Thymidine kinase
gi|71153800|sp|Q5HE81.1|KITH_STAAC RecName: Full=Thymidine kinase
gi|109892495|sp|Q2FF09.1|KITH_STAA3 RecName: Full=Thymidine kinase
gi|109892496|sp|Q2YUN4.1|KITH_STAAB RecName: Full=Thymidine kinase
gi|21205214|dbj|BAB95908.1| thymidine kinase [Staphylococcus aureus subsp. aureus MW2]
gi|49242472|emb|CAG41188.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49245355|emb|CAG43830.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286327|gb|AAW38421.1| thymidine kinase [Staphylococcus aureus subsp. aureus COL]
gi|82657251|emb|CAI81692.1| thymidine kinase [Staphylococcus aureus RF122]
gi|87126625|gb|ABD21139.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203581|gb|ABD31391.1| thymidine kinase, putative [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|87312667|gb|ABD37699.1| thymidine kinase [Staphylococcus aureus]
gi|150375035|dbj|BAF68295.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. Newman]
gi|160369133|gb|ABX30104.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725231|gb|EES93960.1| thymidine kinase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728955|gb|EES97684.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH130]
gi|257270963|gb|EEV03136.1| thymidine kinase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257274258|gb|EEV05775.1| thymidine kinase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257277766|gb|EEV08436.1| thymidine kinase [Staphylococcus aureus subsp. aureus 68-397]
gi|257280873|gb|EEV11018.1| thymidine kinase [Staphylococcus aureus subsp. aureus E1410]
gi|257283540|gb|EEV13667.1| thymidine kinase [Staphylococcus aureus subsp. aureus M876]
gi|257859117|gb|EEV81974.1| thymidine kinase [Staphylococcus aureus A5948]
gi|259159491|gb|EEW44541.1| thymidine kinase [Staphylococcus aureus 930918-3]
gi|269941718|emb|CBI50125.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
TW20]
gi|282312909|gb|EFB43310.1| thymidine kinase [Staphylococcus aureus subsp. aureus C101]
gi|282316157|gb|EFB46538.1| thymidine kinase [Staphylococcus aureus subsp. aureus C427]
gi|282318670|gb|EFB49027.1| thymidine kinase [Staphylococcus aureus subsp. aureus D139]
gi|282321171|gb|EFB51502.1| thymidine kinase [Staphylococcus aureus subsp. aureus M899]
gi|282324449|gb|EFB54762.1| thymidine kinase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282326702|gb|EFB57000.1| thymidine kinase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330413|gb|EFB59931.1| thymidine kinase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282593298|gb|EFB98295.1| thymidine kinase [Staphylococcus aureus A9765]
gi|282594821|gb|EFB99798.1| thymidine kinase [Staphylococcus aureus subsp. aureus C160]
gi|283459492|gb|EFC06585.1| thymidine kinase [Staphylococcus aureus subsp. aureus H19]
gi|283471336|emb|CAQ50547.1| thymidine kinase [Staphylococcus aureus subsp. aureus ST398]
gi|283789617|gb|EFC28440.1| thymidine kinase [Staphylococcus aureus subsp. aureus A017934/97]
gi|290919673|gb|EFD96746.1| thymidine kinase [Staphylococcus aureus subsp. aureus M1015]
gi|291094740|gb|EFE25012.1| thymidine kinase [Staphylococcus aureus subsp. aureus 58-424]
gi|291466236|gb|EFF08763.1| thymidine kinase [Staphylococcus aureus subsp. aureus M809]
gi|294823037|gb|EFG39469.1| thymidine kinase [Staphylococcus aureus A9754]
gi|296885260|gb|EFH24200.1| thymidine kinase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297576942|gb|EFH95656.1| thymidine kinase [Staphylococcus aureus subsp. aureus MN8]
gi|298695393|gb|ADI98615.1| thymidine kinase [Staphylococcus aureus subsp. aureus ED133]
gi|300888265|gb|EFK83456.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH70]
gi|302333765|gb|ADL23958.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302752000|gb|ADL66177.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304342159|gb|EFM08059.1| thymidine kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|312437463|gb|ADQ76534.1| thymidine kinase [Staphylococcus aureus subsp. aureus TCH60]
gi|315193284|gb|EFU23682.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS00]
gi|315196947|gb|EFU27289.1| thymidine kinase [Staphylococcus aureus subsp. aureus CGS01]
gi|320140709|gb|EFW32561.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA131]
gi|320143685|gb|EFW35462.1| thymidine kinase [Staphylococcus aureus subsp. aureus MRSA177]
gi|329314804|gb|AEB89217.1| Thymidine kinase [Staphylococcus aureus subsp. aureus T0131]
gi|329723998|gb|EGG60522.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21189]
gi|329729342|gb|EGG65750.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21193]
gi|334270921|gb|EGL89317.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21305]
gi|334273780|gb|EGL92119.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21310]
gi|341839621|gb|EGS81201.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21235]
gi|341843082|gb|EGS84314.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21269]
gi|341848962|gb|EGS90117.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21266]
gi|341857124|gb|EGS97947.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21195]
gi|344178199|emb|CCC88685.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus
LGA251]
gi|359831104|gb|AEV79082.1| Thymidine kinase [Staphylococcus aureus subsp. aureus M013]
gi|364523348|gb|AEW66098.1| thymidine kinase [Staphylococcus aureus subsp. aureus 11819-97]
gi|365165878|gb|EHM57626.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21209]
gi|365173699|gb|EHM64185.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21178]
gi|365228417|gb|EHM69601.1| thymidine kinase [Staphylococcus aureus subsp. aureus VCU006]
gi|365234477|gb|EHM75409.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21331]
gi|365234603|gb|EHM75533.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21334]
gi|365241018|gb|EHM81775.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21232]
gi|365242488|gb|EHM83195.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21340]
gi|371974818|gb|EHO92133.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21262]
gi|371975223|gb|EHO92522.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21264]
gi|371984076|gb|EHP01203.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21333]
gi|371985151|gb|EHP02236.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21283]
gi|374363942|gb|AEZ38047.1| thymidine kinase [Staphylococcus aureus subsp. aureus VC40]
gi|374395792|gb|EHQ67048.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21342]
gi|374396746|gb|EHQ67972.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21345]
gi|374398153|gb|EHQ69343.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21343]
gi|375019880|gb|EHS13430.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-24]
gi|375023035|gb|EHS16501.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-55]
gi|375030420|gb|EHS23737.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-91]
gi|375032679|gb|EHS25905.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-88]
gi|375032757|gb|EHS25978.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-111]
gi|375035285|gb|EHS28415.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-105]
gi|375369080|gb|EHS72971.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-125]
gi|375369558|gb|EHS73432.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-160]
gi|375370466|gb|EHS74271.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-189]
gi|375374065|gb|EHS77709.1| thymidine kinase [Staphylococcus aureus subsp. aureus IS-157]
gi|377693381|gb|EHT17753.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1114]
gi|377700743|gb|EHT25077.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1214]
gi|377702586|gb|EHT26907.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1500]
gi|377702693|gb|EHT27013.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1242]
gi|377709172|gb|EHT33443.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1605]
gi|377715714|gb|EHT39901.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1835]
gi|377721176|gb|EHT45317.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG547]
gi|377729637|gb|EHT53727.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1176]
gi|377732023|gb|EHT56075.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1233]
gi|377736654|gb|EHT60669.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1612]
gi|377739894|gb|EHT63894.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1770]
gi|377741383|gb|EHT65372.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG2018]
gi|377748434|gb|EHT72391.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG1267]
gi|377749908|gb|EHT73847.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG149]
gi|377768409|gb|EHT92192.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC93]
gi|377769202|gb|EHT92978.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC128]
gi|383972389|gb|EID88434.1| thymidine kinase [Staphylococcus aureus subsp. aureus CO-23]
gi|385197093|emb|CCG16738.1| putative thymidine kinase [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|394328997|gb|EJE55124.1| thymidine kinase [Staphylococcus aureus subsp. aureus str. Newbould
305]
gi|404440889|gb|AFR74082.1| putative thymidine kinase [Staphylococcus aureus 08BA02176]
gi|421955634|gb|EKU07970.1| Thymidine kinase [Staphylococcus aureus CN79]
gi|436430589|gb|ELP27949.1| thymidine kinase [Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505806|gb|ELP41676.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21282]
gi|443408736|gb|ELS67251.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21196]
gi|445547087|gb|ELY15361.1| thymidine kinase [Staphylococcus aureus KT/314250]
Length = 199
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 71 ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|417898352|ref|ZP_12542273.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21259]
gi|341848712|gb|EGS89872.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21259]
Length = 199
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 71 ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|416841468|ref|ZP_11904423.1| thymidine kinase [Staphylococcus aureus O11]
gi|416847179|ref|ZP_11906988.1| thymidine kinase [Staphylococcus aureus O46]
gi|323439332|gb|EGA97056.1| thymidine kinase [Staphylococcus aureus O11]
gi|323442459|gb|EGB00088.1| thymidine kinase [Staphylococcus aureus O46]
Length = 199
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 71 ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|167038493|ref|YP_001666071.1| thymidine kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167038764|ref|YP_001661749.1| thymidine kinase [Thermoanaerobacter sp. X514]
gi|300913651|ref|ZP_07130968.1| Thymidine kinase [Thermoanaerobacter sp. X561]
gi|307723334|ref|YP_003903085.1| Thymidine kinase [Thermoanaerobacter sp. X513]
gi|320116889|ref|YP_004187048.1| Thymidine kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687577|sp|B0K1F4.1|KITH_THEPX RecName: Full=Thymidine kinase
gi|238687642|sp|B0K7G9.1|KITH_THEP3 RecName: Full=Thymidine kinase
gi|166853004|gb|ABY91413.1| Thymidine kinase [Thermoanaerobacter sp. X514]
gi|166857327|gb|ABY95735.1| Thymidine kinase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|300890336|gb|EFK85481.1| Thymidine kinase [Thermoanaerobacter sp. X561]
gi|307580395|gb|ADN53794.1| Thymidine kinase [Thermoanaerobacter sp. X513]
gi|319929980|gb|ADV80665.1| Thymidine kinase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 193
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPMFSGK+ ELIRRI+R Q A + + + A DDRY +KV +H+ + A+S V+
Sbjct: 12 EVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAISVVK 71
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++I +D +VI IDE QF +
Sbjct: 72 AFEIIELLEEDTEVIAIDEIQFFD------------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+C
Sbjct: 96 ---------HSIVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDVMAIAESVDKLTAIC 146
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 147 VKCGNPATRTQRL 159
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI+R Q A + + + A DDRY +KV +H+ + A+S V+ ++I + D +VI
Sbjct: 28 RRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNINAISVVKAFEIIELLEEDTEVIA 87
Query: 78 IDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF +V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+C+
Sbjct: 88 IDEIQFFDHSIVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDVMAIAESVDKLTAICV 147
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 148 KCGNPATRTQRL 159
>gi|209395188|gb|ACI45389.1| thymidine kinase [Staphylococcus aureus]
Length = 158
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 4 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 63
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 64 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 123
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 124 CAVCGSSSSRTQRL 137
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 46/191 (24%)
Query: 164 TTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPH-TKD 222
+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H +
Sbjct: 1 SEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTN 60
Query: 223 IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPD 282
+DVIGIDE QF + +
Sbjct: 61 VDVIGIDEVQFFD---------------------------------------------DE 75
Query: 283 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 342
+VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC C ++ T+
Sbjct: 76 IVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQ 135
Query: 343 RIGQEKEVRIE 353
R+ K +I+
Sbjct: 136 RLINGKPAKID 146
>gi|418898706|ref|ZP_13452773.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418907051|ref|ZP_13461072.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377758265|gb|EHT82151.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC341D]
gi|377761507|gb|EHT85378.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIGC345D]
Length = 183
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 9 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 68
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 69 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 128
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 129 CAVCGSSSSRTQRL 142
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 46/196 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++
Sbjct: 1 MFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMT 60
Query: 219 H-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPP 277
H ++DVIGIDE QF +
Sbjct: 61 HDLTNVDVIGIDEVQFFD------------------------------------------ 78
Query: 278 PEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRD 337
++VS E ++ G V+VA LD F+ F + L+ ++E V KL AVC C
Sbjct: 79 ---DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSS 135
Query: 338 AAFTKRIGQEKEVRIE 353
++ T+R+ K +I+
Sbjct: 136 SSRTQRLINGKPAKID 151
>gi|193216012|ref|YP_001997211.1| thymidine kinase [Chloroherpeton thalassium ATCC 35110]
gi|193089489|gb|ACF14764.1| Thymidine kinase [Chloroherpeton thalassium ATCC 35110]
Length = 170
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR+RR Q A + I + A D+RY ++ +H + ++++ +++ H+++ DV+
Sbjct: 9 LIRRLRRAQIAGQKTEIFKPAIDNRYSETEIVSHSEFRISSRVVSHSKEIMLHSQNADVV 68
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +V ES+AN GK V+VA LD F+ F + L+ +AE V K AVC
Sbjct: 69 GIDEAQFFDEGIVDVCESLANNGKRVIVAGLDLDFRGKPFGPMPQLLAVAEYVTKTLAVC 128
Query: 136 MSCFRDAAFTKRIGQEKEVI 155
M A+ T+RI ++I
Sbjct: 129 MKSGLPASRTQRIAPGTDLI 148
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 45/186 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR+RR Q A + I + A D+RY ++ +H + ++++ +++
Sbjct: 1 MFSGKTEELIRRLRRAQIAGQKTEIFKPAIDNRYSETEIVSHSEFRISSRVVSHSKEIML 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
H+++ DV+GIDE QF +
Sbjct: 61 HSQNADVVGIDEAQFFD------------------------------------------- 77
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
+V ES+AN GK V+VA LD F+ F + L+ +AE V K AVCM A
Sbjct: 78 --EGIVDVCESLANNGKRVIVAGLDLDFRGKPFGPMPQLLAVAEYVTKTLAVCMKSGLPA 135
Query: 339 AFTKRI 344
+ T+RI
Sbjct: 136 SRTQRI 141
>gi|209395186|gb|ACI45388.1| thymidine kinase [Staphylococcus aureus]
Length = 156
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 1 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 60
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 61 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 120
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 121 CAVCGSSSSRTQRL 134
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 46/188 (24%)
Query: 167 LIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPH-TKDIDV 225
LIRR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 1 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 60
Query: 226 IGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVS 285
IGIDE QF + ++VS
Sbjct: 61 IGIDEVQFFD---------------------------------------------DEIVS 75
Query: 286 FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIG 345
E ++ G V+VA LD F+ F + L+ ++E V KL AVC C ++ T+R+
Sbjct: 76 IVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLI 135
Query: 346 QEKEVRIE 353
K +I+
Sbjct: 136 NGKPAKID 143
>gi|374309565|ref|YP_005055995.1| thymidine kinase [Granulicella mallensis MP5ACTX8]
gi|358751575|gb|AEU34965.1| Thymidine kinase [Granulicella mallensis MP5ACTX8]
Length = 201
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 51/203 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ--KLTAVSA 210
EVI GPMFSGK+ ELIRR++R + A R + D RY +++H Q + T V+
Sbjct: 10 EVITGPMFSGKSEELIRRLKRARIARQRVACYKPDIDLRYHRTAIASHSAQTHEATTVAT 69
Query: 211 VE--LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
VE L P +++V+GIDE QF
Sbjct: 70 VERLREALYPQLSEVEVVGIDEVQF----------------------------------- 94
Query: 269 NAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D ++ A + GK V++A LD TF+ F + +L+ +A+ V KL
Sbjct: 95 -----------FDDGIIPLAVELIAMGKRVLMAGLDTTFEAEPFGPVPNLMAIADKVTKL 143
Query: 328 TAVCMSCFRDAAFTKRIGQEKEV 350
+AVCM C A T+R+GQ +E+
Sbjct: 144 SAVCMVCGASAIHTQRLGQSQEL 166
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 5/145 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQ--KLTAVSAVEL--NKLIPHTKD 72
RR++R + A R + D RY +A+H Q + T V+ VE L P +
Sbjct: 24 LIRRLKRARIARQRVACYKPDIDLRYHRTAIASHSAQTHEATTVATVERLREALYPQLSE 83
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
++V+GIDE QFF D ++ A + GK V++A LD TF+ F + +L+ +A+ V KL
Sbjct: 84 VEVVGIDEVQFFDDGIIPLAVELIAMGKRVLMAGLDTTFEAEPFGPVPNLMAIADKVTKL 143
Query: 132 TAVCMSCFRDAAFTKRIGQEKEVIL 156
+AVCM C A T+R+GQ +E+++
Sbjct: 144 SAVCMVCGASAIHTQRLGQSQELVV 168
>gi|423461886|ref|ZP_17438682.1| thymidine kinase [Bacillus cereus BAG5X2-1]
gi|401134063|gb|EJQ41682.1| thymidine kinase [Bacillus cereus BAG5X2-1]
Length = 194
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H +++DVI IDE QF +
Sbjct: 71 SKDIFNHVAEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
+C A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AV + H +++DVI
Sbjct: 27 RRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHVAEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
+C A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158
>gi|378550159|ref|ZP_09825375.1| hypothetical protein CCH26_08726 [Citricoccus sp. CH26A]
Length = 201
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 93/205 (45%), Gaps = 49/205 (23%)
Query: 143 AFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ 202
A + E +VI GPMF+GK+ EL+RR+RR A +V +A D R+ + V++H
Sbjct: 11 AIARERAGELQVIAGPMFAGKSEELMRRVRRAWLAGLSVEVVNHALDVRHGSRDVASHAG 70
Query: 203 QKLTAVS---AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
Q++ A S A L L+ +D+D++ IDE QF GSD V R
Sbjct: 71 QRIPARSVPDAAGLAGLVA-GQDLDLLAIDEAQFF----GSDLVPVVTR----------- 114
Query: 260 SPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 319
+A G VVV+ L TF F + +L+
Sbjct: 115 ------------------------------LAGEGLTVVVSGLCVTFDGLPFEPLPALMA 144
Query: 320 LAECVEKLTAVCMSCFRDAAFTKRI 344
LAE V KLTAVC C RDAAF R+
Sbjct: 145 LAEEVVKLTAVCSVCGRDAAFHVRV 169
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDI 73
RR+RR A +V +A D R+ + VA+H Q++ A S A L L+ +D+
Sbjct: 35 LMRRVRRAWLAGLSVEVVNHALDVRHGSRDVASHAGQRIPARSVPDAAGLAGLVA-GQDL 93
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
D++ IDE QFF D+V +A G VVV+ L TF F + +L+ LAE V KLT
Sbjct: 94 DLLAIDEAQFFGSDLVPVVTRLAGEGLTVVVSGLCVTFDGLPFEPLPALMALAEEVVKLT 153
Query: 133 AVCMSCFRDAAFTKRI 148
AVC C RDAAF R+
Sbjct: 154 AVCSVCGRDAAFHVRV 169
>gi|418283277|ref|ZP_12896028.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21202]
gi|418560767|ref|ZP_13125276.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21252]
gi|418994817|ref|ZP_13542450.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG290]
gi|365167925|gb|EHM59292.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21202]
gi|371971189|gb|EHO88596.1| thymidine kinase [Staphylococcus aureus subsp. aureus 21252]
gi|377741750|gb|EHT65736.1| thymidine kinase [Staphylococcus aureus subsp. aureus CIG290]
Length = 199
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H ++DVIGIDE QF +
Sbjct: 71 ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V+ E +++ G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------DEIVNIVEKLSSDGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + ++++ H ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V+ E +++ G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDEIVNIVEKLSSDGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|345023586|ref|ZP_08787199.1| thymidine kinase [Ornithinibacillus scapharcae TW25]
Length = 206
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 90/196 (45%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---- 208
EVI G MFSGK+ ELIRR+RR YAN + + + A D+RYD V +H+ + A
Sbjct: 11 EVICGSMFSGKSEELIRRVRRATYANQKVQVFKPAIDNRYDDVAVVSHNGTSVMATPVDS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
SA L L+P +++++GIDE QF +
Sbjct: 71 SANILENLLP---NVEIVGIDEAQFFD--------------------------------- 94
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
D++ AE +A+ G V+ A LD F+ F + L+ LAE V KL
Sbjct: 95 ------------EDIIYVAEQLADRGIRVIAAGLDQDFRGEPFGPMPELMALAESVTKLN 142
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A+ T+R+
Sbjct: 143 AICPLCGSPASRTQRL 158
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 8/137 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR YAN + + + A D+RYD V +H+ + A SA L L+P +
Sbjct: 25 LIRRVRRATYANQKVQVFKPAIDNRYDDVAVVSHNGTSVMATPVDSSANILENLLP---N 81
Query: 73 IDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
++++GIDE QFF D++ AE +A+ G V+ A LD F+ F + L+ LAE V KL
Sbjct: 82 VEIVGIDEAQFFDEDIIYVAEQLADRGIRVIAAGLDQDFRGEPFGPMPELMALAESVTKL 141
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A+ T+R+
Sbjct: 142 NAICPLCGSPASRTQRL 158
>gi|228994050|ref|ZP_04153951.1| Thymidine kinase [Bacillus pseudomycoides DSM 12442]
gi|228765698|gb|EEM14351.1| Thymidine kinase [Bacillus pseudomycoides DSM 12442]
Length = 194
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|313679811|ref|YP_004057550.1| thymidine kinase [Oceanithermus profundus DSM 14977]
gi|313152526|gb|ADR36377.1| Thymidine kinase [Oceanithermus profundus DSM 14977]
Length = 194
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 94/204 (46%), Gaps = 48/204 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA---VS 209
EVI GPMFSGK+ ELIRR++R A + + + DDRY V +HD Q++ A S
Sbjct: 12 EVIAGPMFSGKSEELIRRVKRVMIAGQKVRVFKPRLDDRYHKRDVVSHDGQRVEAEPVAS 71
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A EL + + V+ +DE QF +
Sbjct: 72 AAELLAQVEANGPLQVVAVDEAQFF----------------------------------D 97
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
AAL P+V+ E +A+ G V+VA LD F+ F + L+ AE VEKL+A
Sbjct: 98 AAL--------PEVL---ERLADRGIRVIVAGLDLDFRGEPFGPMPQLLARAEFVEKLSA 146
Query: 330 VCMSCFRDAAFTKRIGQEKEVRIE 353
VC+ C R A T+R+ + R E
Sbjct: 147 VCVRCGRSATRTQRLIDGEPARYE 170
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA---VSAVELNKLIPHTKD 72
RR++R A + + + DDRY V +HD Q++ A SA EL +
Sbjct: 25 ELIRRVKRVMIAGQKVRVFKPRLDDRYHKRDVVSHDGQRVEAEPVASAAELLAQVEANGP 84
Query: 73 IDVIGIDEGQFF----PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ V+ +DE QFF P+V+ E +A+ G V+VA LD F+ F + L+ AE V
Sbjct: 85 LQVVAVDEAQFFDAALPEVL---ERLADRGIRVIVAGLDLDFRGEPFGPMPQLLARAEFV 141
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
EKL+AVC+ C R A T+R+
Sbjct: 142 EKLSAVCVRCGRSATRTQRL 161
>gi|223043940|ref|ZP_03613981.1| thymidine kinase [Staphylococcus capitis SK14]
gi|314934188|ref|ZP_07841549.1| thymidine kinase [Staphylococcus caprae C87]
gi|417906649|ref|ZP_12550430.1| thymidine kinase [Staphylococcus capitis VCU116]
gi|222442655|gb|EEE48759.1| thymidine kinase [Staphylococcus capitis SK14]
gi|313653093|gb|EFS16854.1| thymidine kinase [Staphylococcus caprae C87]
gi|341597651|gb|EGS40197.1| thymidine kinase [Staphylococcus capitis VCU116]
Length = 199
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +HD ++ A++
Sbjct: 11 ETITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNEIEAINIST 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ D+DVIGIDE QF +
Sbjct: 71 SREILNQDLDDVDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V+ E +A G VVVA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------GEIVNIVEQLAKNGHRVVVAGLDMDFRGEPFEPMPKLLAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 AVCGSPSSRTQRL 158
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +HD ++ A++ +++ D+DV
Sbjct: 25 LIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNEIEAINISTSREILNQDLDDVDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF ++V+ E +A G VVVA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDGEIVNIVEQLAKNGHRVVVAGLDMDFRGEPFEPMPKLLAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSPSSRTQRL 158
>gi|255645307|gb|ACU23150.1| unknown [Glycine max]
Length = 216
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 93/207 (44%), Gaps = 50/207 (24%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+ RI A ++++ +KD RY + V THD K +
Sbjct: 21 EVHVIVGPMFAGKTTALLCRIESELNAAKNVVLLKSSKDTRYAIDSVVTHDGIKFPCRAL 80
Query: 211 VELNKLIPHTKD-----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L D +DVIGIDE QF E D Y C+
Sbjct: 81 PDLLSFREKHGDDAYQKLDVIGIDEAQFFE-----DLYEFCCKA---------------- 119
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
A+E+ GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 120 ADED------------------------GKTVIVAGLDGDYLRRSFGSVLHIIPLADSVT 155
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R +++E +
Sbjct: 156 KLTARCELCGKRAFFTLRKTEQRETEL 182
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-----ID 74
RI A ++++ +KD RY + V THD K + +L D +D
Sbjct: 40 RIESELNAAKNVVLLKSSKDTRYAIDSVVTHDGIKFPCRALPDLLSFREKHGDDAYQKLD 99
Query: 75 VIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLA+ V KLTA
Sbjct: 100 VIGIDEAQFFEDLYEFCCKAADEDGKTVIVAGLDGDYLRRSFGSVLHIIPLADSVTKLTA 159
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
C C + A FT R +++E L
Sbjct: 160 RCELCGKRAFFTLRKTEQRETEL 182
>gi|163955199|ref|YP_001648303.1| hypothetical protein OsV5_227r [Ostreococcus virus OsV5]
gi|163638648|gb|ABY28007.1| hypothetical protein OsV5_227r [Ostreococcus virus OsV5]
Length = 183
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 50/203 (24%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+G MFSGKT+ELIRR++RY+ + +++ AKD R E + THD + + +
Sbjct: 5 IIMGNMFSGKTSELIRRLKRYRIIGKKIVVINSAKDTRSPEEVLKTHDGIEFPCIKVDHI 64
Query: 214 NKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ I D +++ IDE QF FK L +
Sbjct: 65 SHCIVKQSFCDAEIVAIDEAQF----------------------------FKNLKD---- 92
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D+ F GK V++A LDG +Q+ F ++L IP+A V KL+A+C
Sbjct: 93 --------FVDMCLF------LGKSVILAGLDGDYQQKKFGEVLDCIPMASDVVKLSALC 138
Query: 332 MSCFRD--AAFTKRIGQEKEVRI 352
M C FTKRI Q E+ +
Sbjct: 139 MDCRNGTPGPFTKRIVQSDELEL 161
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DIDVI 76
RR++RY+ + +++ AKD R E + THD + + ++ I D +++
Sbjct: 20 RRLKRYRIIGKKIVVINSAKDTRSPEEVLKTHDGIEFPCIKVDHISHCIVKQSFCDAEIV 79
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++ F + GK V++A LDG +Q+ F ++L IP+A V KL+A+CM
Sbjct: 80 AIDEAQFFKNLKDFVDMCLFLGKSVILAGLDGDYQQKKFGEVLDCIPMASDVVKLSALCM 139
Query: 137 SCFRD--AAFTKRIGQEKEVIL 156
C FTKRI Q E+ L
Sbjct: 140 DCRNGTPGPFTKRIVQSDELEL 161
>gi|356547841|ref|XP_003542313.1| PREDICTED: thymidine kinase-like [Glycine max]
Length = 216
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 93/207 (44%), Gaps = 50/207 (24%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+ RI A ++++ +KD RY + V THD K +
Sbjct: 21 EVHVIVGPMFAGKTTALLCRIESELNAAKNVVLLKSSKDTRYAIDSVVTHDGIKFPCRAL 80
Query: 211 VELNKLIPHTKD-----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+L D +DVIGIDE QF E D Y C+
Sbjct: 81 PDLLSFREKHGDDAYQKLDVIGIDEAQFFE-----DLYEFCCKA---------------- 119
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
A+E+ GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 120 ADED------------------------GKTVIVAGLDGDYLRRSFGSVLHIIPLADSVT 155
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRI 352
KLTA C C + A FT R +++E +
Sbjct: 156 KLTARCELCGKRAFFTLRKTEQRETEL 182
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-----ID 74
RI A ++++ +KD RY + V THD K + +L D +D
Sbjct: 40 RIESELNAAKNVVLLKSSKDTRYAIDSVVTHDGIKFPCRALPDLLSFREKHGDDAYQKLD 99
Query: 75 VIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D+ F A+ GK V+VA LDG + R F +L +IPLA+ V KLTA
Sbjct: 100 VIGIDEAQFFEDLYEFCCKAADEDGKTVIVAGLDGDYLRRSFGSVLHIIPLADSVTKLTA 159
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
C C + A FT R +++E L
Sbjct: 160 RCELCGKRAFFTLRKTEQRETEL 182
>gi|29347685|ref|NP_811188.1| thymidine kinase [Bacteroides thetaiotaomicron VPI-5482]
gi|298388100|ref|ZP_06997645.1| thymidine kinase [Bacteroides sp. 1_1_14]
gi|60390098|sp|Q8A5G4.1|KITH_BACTN RecName: Full=Thymidine kinase
gi|29339586|gb|AAO77382.1| thymidine kinase [Bacteroides thetaiotaomicron VPI-5482]
gi|298259130|gb|EFI02009.1| thymidine kinase [Bacteroides sp. 1_1_14]
Length = 199
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF + D + VCR+
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD-----DGLIDVCRQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V++A LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIIAGLDMDFKGNPFGPMPQLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGDLASFSHRTVKNDKQV 172
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HD + + ++ T +IDV+GI
Sbjct: 35 RRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D ++ +AN G V++A LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDDGLIDVCRQLANNGIRVIIAGLDMDFKGNPFGPMPQLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A+F+ R + +K+V+LG
Sbjct: 155 CGDLASFSHRTVKNDKQVLLG 175
>gi|380692364|ref|ZP_09857223.1| thymidine kinase [Bacteroides faecis MAJ27]
Length = 199
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF + D + VCR+
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD-----DGLIDVCRQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V++A LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIIAGLDMDFKGNPFGPMPQLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGDLASFSHRTVKNDKQV 172
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HD + + ++ T +IDV+GI
Sbjct: 35 RRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D ++ +AN G V++A LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDDGLIDVCRQLANNGIRVIIAGLDMDFKGNPFGPMPQLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A+F+ R + +K+V+LG
Sbjct: 155 CGDLASFSHRTVKNDKQVLLG 175
>gi|158321609|ref|YP_001514116.1| thymidine kinase [Alkaliphilus oremlandii OhILAs]
gi|158141808|gb|ABW20120.1| Thymidine kinase [Alkaliphilus oremlandii OhILAs]
Length = 195
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 47/198 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI+GPM++GK+ EL+RR+ R + AN + + + A D+RY T +++H +++ +
Sbjct: 10 GGSIEVIVGPMYAGKSEELMRRVNRCRIANLKVLSFKPAIDNRYSTNHITSHSGKQMECI 69
Query: 209 SAVELNKLIPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+++ H KD DV+ IDE QF+
Sbjct: 70 PVSSPEEILGHLENKDFDVLAIDEVQFLG------------------------------- 98
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
D+V + A+ GK V+ + LD F+ F + +L+ +AE V K
Sbjct: 99 --------------EDIVKICKDAADMGKRVICSGLDMDFRGEPFQVVPNLMAIAEYVTK 144
Query: 327 LTAVCMSCFRDAAFTKRI 344
LTAVCM C A T+RI
Sbjct: 145 LTAVCMKCKVPATRTQRI 162
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH--TKDIDVI 76
RR+ R + AN + + + A D+RY T + +H +++ + +++ H KD DV+
Sbjct: 30 RRVNRCRIANLKVLSFKPAIDNRYSTNHITSHSGKQMECIPVSSPEEILGHLENKDFDVL 89
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IDE QF D+V + A+ GK V+ + LD F+ F + +L+ +AE V KLTAVC
Sbjct: 90 AIDEVQFLGEDIVKICKDAADMGKRVICSGLDMDFRGEPFQVVPNLMAIAEYVTKLTAVC 149
Query: 136 MSCFRDAAFTKRI 148
M C A T+RI
Sbjct: 150 MKCKVPATRTQRI 162
>gi|115378661|ref|ZP_01465811.1| thymidine kinase [Stigmatella aurantiaca DW4/3-1]
gi|310823072|ref|YP_003955430.1| thymidine kinase [Stigmatella aurantiaca DW4/3-1]
gi|115364327|gb|EAU63412.1| thymidine kinase [Stigmatella aurantiaca DW4/3-1]
gi|309396144|gb|ADO73603.1| Thymidine kinase [Stigmatella aurantiaca DW4/3-1]
Length = 199
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 90/207 (43%), Gaps = 47/207 (22%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
F K IG EV+ GPMFSGKT ELIRR++R Y R + + DDRYD +V +H Q
Sbjct: 4 FPKDIGW-IEVVCGPMFSGKTEELIRRVKRAVYGKQRVQVFKPKVDDRYDETQVVSHSQL 62
Query: 204 KLTAVSAVELNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPF 262
KLT+ ++ H D V+GIDE QF
Sbjct: 63 KLTSTPIERAEEIFYHLLPDTQVVGIDEVQFFG--------------------------- 95
Query: 263 KTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
P+VV E++A G V+ A LD +Q F + L+ +AE
Sbjct: 96 ------------------PEVVQVCEALAYRGVRVICAGLDQDYQGRPFEPMPQLLAVAE 137
Query: 323 CVEKLTAVCMSCFRDAAFTKRIGQEKE 349
V K A+C+ C A ++R+ +E
Sbjct: 138 YVTKQLAICVVCGNPANRSQRLVSSEE 164
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR++R Y R + + DDRYD +V +H Q KLT+ ++ H D V+G
Sbjct: 28 RRVKRAVYGKQRVQVFKPKVDDRYDETQVVSHSQLKLTSTPIERAEEIFYHLLPDTQVVG 87
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF P+VV E++A G V+ A LD +Q F + L+ +AE V K A+C+
Sbjct: 88 IDEVQFFGPEVVQVCEALAYRGVRVICAGLDQDYQGRPFEPMPQLLAVAEYVTKQLAICV 147
Query: 137 SCFRDAAFTKR-IGQEKEVILG 157
C A ++R + E+ V++G
Sbjct: 148 VCGNPANRSQRLVSSEERVVVG 169
>gi|357041967|ref|ZP_09103674.1| thymidine kinase [Prevotella histicola F0411]
gi|355369981|gb|EHG17370.1| thymidine kinase [Prevotella histicola F0411]
Length = 196
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A R I + + D RY E V +HDQ + +
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAQFAKQRVEIFKSSIDTRYSEENVVSHDQNTIRSTPIDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ D M VC +
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD-----DGLMDVCNQ----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD ++ F I +L +A+ V K+ A+C+
Sbjct: 110 -----------------LANNGVRVIVAGLDMDYKGVPFGPIPALCAVADEVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYVSHRL 164
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A R I + + D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 34 RRMKRAQFAKQRVEIFKSSIDTRYSEENVVSHDQNTIRSTPIDSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF D ++ +AN G V+VA LD ++ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDDGLMDVCNQLANNGVRVIVAGLDMDYKGVPFGPIPALCAVADEVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R I + V+LG
Sbjct: 154 CGALAYVSHRLIADDHRVMLG 174
>gi|256751363|ref|ZP_05492242.1| Thymidine kinase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749745|gb|EEU62770.1| Thymidine kinase [Thermoanaerobacter ethanolicus CCSD1]
Length = 193
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPMFSGK+ ELIRRI+R Q A + + + A DDRY +KV +H+ + A+S V+
Sbjct: 12 EVIVGPMFSGKSEELIRRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNIYAISVVK 71
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++I +D +VI IDE QF +
Sbjct: 72 AFEIIELLEEDTEVIAIDEIQFFD------------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+C
Sbjct: 96 ---------HSIVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDVMAIAESVDKLTAIC 146
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 147 VKCGNPATRTQRL 159
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI+R Q A + + + A DDRY +KV +H+ + A+S V+ ++I + D +VI
Sbjct: 28 RRIKRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGTNIYAISVVKAFEIIELLEEDTEVIA 87
Query: 78 IDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF +V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+C+
Sbjct: 88 IDEIQFFDHSIVDVVREIADLGKRVICAGLDMDFRGEPFGPTPDVMAIAESVDKLTAICV 147
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 148 KCGNPATRTQRL 159
>gi|205375310|ref|ZP_03228100.1| thymidine kinase [Bacillus coahuilensis m4-4]
Length = 206
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 91/194 (46%), Gaps = 48/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A M+ + D+RY E V +H+ + A VE
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQSLMVFKPKVDNRYSEESVVSHNGTSVMA-KPVE 69
Query: 213 LNKLIPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ +I T DIDV+ IDE QF + EN
Sbjct: 70 HSSIILDTVTADIDVVAIDEVQFFD--------------------------------EN- 96
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+V+ E +AN G V++A LD F+ F + +L+ +AE V KL AV
Sbjct: 97 ------------IVNVVEKLANTGHRVILAGLDQDFRGEPFGPMPALMAIAEQVTKLQAV 144
Query: 331 CMSCFRDAAFTKRI 344
C C A+ T+R+
Sbjct: 145 CAVCGSPASRTQRL 158
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDID 74
RR+RR Q+A M+ + D+RY E V +H+ + A VE + +I T DID
Sbjct: 25 LIRRVRRTQFAKQSLMVFKPKVDNRYSEESVVSHNGTSVMA-KPVEHSSIILDTVTADID 83
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+ IDE QFF ++V+ E +AN G V++A LD F+ F + +L+ +AE V KL A
Sbjct: 84 VVAIDEVQFFDENIVNVVEKLANTGHRVILAGLDQDFRGEPFGPMPALMAIAEQVTKLQA 143
Query: 134 VCMSCFRDAAFTKRI 148
VC C A+ T+R+
Sbjct: 144 VCAVCGSPASRTQRL 158
>gi|356980054|gb|AET43533.1| thymidine kinase [Micromonas pusilla virus PL1]
gi|357542172|gb|AET84932.1| thymidine kinase [Micromonas pusilla virus SP1]
Length = 176
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 92/204 (45%), Gaps = 52/204 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+G MFSGKT+ELIRR++R + + ++V AKD R E + THD K EL
Sbjct: 5 IIMGNMFSGKTSELIRRLKRLKIIGKKILVVNSAKDTRSPDEVLKTHDNVKFDCFKVYEL 64
Query: 214 NKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+LI + + D+I IDE QF
Sbjct: 65 FELINKEEFNNADIIAIDEAQF-------------------------------------- 86
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
FP + F E K V++A LDG + F ++L IP+A V KL+A+C
Sbjct: 87 --------FPRLKKFVECCMCVNKDVIIAGLDGDSFQNKFGELLDCIPIACEVTKLSALC 138
Query: 332 MSCFRDAA---FTKRIGQEKEVRI 352
M C +D FTKRI + +E+ +
Sbjct: 139 MRC-KDGTPGPFTKRIVKNQELEL 161
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 8/146 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DIDVI 76
RR++R + + ++V AKD R E + THD K EL +LI + + D+I
Sbjct: 20 RRLKRLKIIGKKILVVNSAKDTRSPDEVLKTHDNVKFDCFKVYELFELINKEEFNNADII 79
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFFP + F E K V++A LDG + F ++L IP+A V KL+A+CM
Sbjct: 80 AIDEAQFFPRLKKFVECCMCVNKDVIIAGLDGDSFQNKFGELLDCIPIACEVTKLSALCM 139
Query: 137 SCFRDAA---FTKRI--GQEKEVILG 157
C +D FTKRI QE E+I G
Sbjct: 140 RC-KDGTPGPFTKRIVKNQELELIGG 164
>gi|319901044|ref|YP_004160772.1| Thymidine kinase [Bacteroides helcogenes P 36-108]
gi|319416075|gb|ADV43186.1| Thymidine kinase [Bacteroides helcogenes P 36-108]
Length = 206
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAIDTRYSDEDVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF + + + VC +
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD-----NGLIEVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGVRVIVAGLDMDFRGIPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNDKQV 172
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFARQRVEIFKPAIDTRYSDEDVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDNGLIEVCNQLANNGVRVIVAGLDMDFRGIPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|296088921|emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELN----KLIPHTKD-IDVIGIDEGQFFPDV 87
I++ KD RY + + THD KL + +L+ KL D +DVIGIDE QFF D+
Sbjct: 496 IIKSNKDTRYGLDSIVTHDGVKLPCWALADLSSFREKLGSDAYDELDVIGIDEAQFFGDL 555
Query: 88 VSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
F A+ GK V+VA LDG + R F +L +IPLA+ V KLTA C C + A FT
Sbjct: 556 YEFCCKAADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGKRAFFTL 615
Query: 147 RIGQEKEVIL 156
R EK+ L
Sbjct: 616 RKTAEKKTEL 625
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 73/176 (41%), Gaps = 52/176 (29%)
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLTAVSAVELN----KLIPHTKD-IDVIGIDEGQFVEVI 237
I++ KD RY + + THD KL + +L+ KL D +DVIGIDE QF
Sbjct: 496 IIKSNKDTRYGLDSIVTHDGVKLPCWALADLSSFREKLGSDAYDELDVIGIDEAQF---- 551
Query: 238 GGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANA-GKI 296
F D+ F A+ GK
Sbjct: 552 ------------------------------------------FGDLYEFCCKAADHDGKT 569
Query: 297 VVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
V+VA LDG + R F +L +IPLA+ V KLTA C C + A FT R EK+ +
Sbjct: 570 VIVAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEICGKRAFFTLRKTAEKKTEL 625
>gi|255693729|ref|ZP_05417404.1| thymidine kinase [Bacteroides finegoldii DSM 17565]
gi|260620480|gb|EEX43351.1| thymidine kinase [Bacteroides finegoldii DSM 17565]
Length = 199
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HD + + ++ T +IDV+GI
Sbjct: 35 RRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLVDVCNQLANNGIRVIVAGLDMDFKGNPFGPMPQLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + EK+V+LG
Sbjct: 155 CGQLASFSHRTVKNEKQVLLG 175
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF +
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD----------------------------- 101
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+V +AN G V+VA LD F+ F + L +A+ V
Sbjct: 102 ----------------SGLVDVCNQLANNGIRVIVAGLDMDFKGNPFGPMPQLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + EK+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNEKQV 172
>gi|334364655|ref|ZP_08513635.1| thymidine kinase [Alistipes sp. HGB5]
gi|390946559|ref|YP_006410319.1| thymidine kinase [Alistipes finegoldii DSM 17242]
gi|313159031|gb|EFR58406.1| thymidine kinase [Alistipes sp. HGB5]
gi|390423128|gb|AFL77634.1| thymidine kinase [Alistipes finegoldii DSM 17242]
Length = 193
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++AN + I + D RY E+V +HD + +
Sbjct: 13 EVICGSMFSGKTEELIRRLKRAKFANQKVEIFKPRIDVRYSEEEVVSHDANAIRSTPVDS 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T D+D++GIDE QF + D + VCRE
Sbjct: 73 ARNILLMTSDVDIVGIDEAQFFD-----DGIIEVCRE----------------------- 104
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A++G V+VA LD + F + +L+ AE V K+ A+C+
Sbjct: 105 -----------------LADSGVRVIVAGLDMDYTGKPFGPMPALMATAEYVTKVHAICV 147
Query: 333 SCFRDAAFTKRIGQEKEV 350
C A + R+ Q++++
Sbjct: 148 RCGNLAHHSHRLTQDEKL 165
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++AN + I + D RY E+V +HD + + ++ T D+D++GI
Sbjct: 29 RRLKRAKFANQKVEIFKPRIDVRYSEEEVVSHDANAIRSTPVDSARNILLMTSDVDIVGI 88
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D ++ +A++G V+VA LD + F + +L+ AE V K+ A+C+
Sbjct: 89 DEAQFFDDGIIEVCRELADSGVRVIVAGLDMDYTGKPFGPMPALMATAEYVTKVHAICVR 148
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A + R+ Q EK V+LG
Sbjct: 149 CGNLAHHSHRLTQDEKLVMLG 169
>gi|423227550|ref|ZP_17213990.1| thymidine kinase [Bacteroides cellulosilyticus CL02T12C19]
gi|392622964|gb|EIY17074.1| thymidine kinase [Bacteroides cellulosilyticus CL02T12C19]
Length = 201
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD + +
Sbjct: 19 EVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTPIDS 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T +IDV+GIDE QF + + + VC E
Sbjct: 79 SASILLFTSEIDVVGIDEAQFFD-----NGLIDVCNE----------------------- 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 111 -----------------LANNGIRVIVAGLDMDFRGLPFGPMPGLCAIADEVSKVHAICV 153
Query: 333 SCFRDAAFTKR 343
C + A+F+ R
Sbjct: 154 KCGQLASFSHR 164
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDNGLIDVCNELANNGIRVIVAGLDMDFRGLPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|224538327|ref|ZP_03678866.1| hypothetical protein BACCELL_03218 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520049|gb|EEF89154.1| hypothetical protein BACCELL_03218 [Bacteroides cellulosilyticus
DSM 14838]
Length = 201
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD + +
Sbjct: 19 EVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTPIDS 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T +IDV+GIDE QF + + + VC E
Sbjct: 79 SASILLFTSEIDVVGIDEAQFFD-----NGLIDVCNE----------------------- 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 111 -----------------LANNGIRVIVAGLDMDFRGLPFGPMPGLCAIADEVSKVHAICV 153
Query: 333 SCFRDAAFTKR 343
C + A+F+ R
Sbjct: 154 KCGQLASFSHR 164
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDNGLIDVCNELANNGIRVIVAGLDMDFRGLPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|70725917|ref|YP_252831.1| thymidine kinase [Staphylococcus haemolyticus JCSC1435]
gi|109892497|sp|Q4L800.1|KITH_STAHJ RecName: Full=Thymidine kinase
gi|68446641|dbj|BAE04225.1| thymidine kinase [Staphylococcus haemolyticus JCSC1435]
Length = 199
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 48/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS-AV 211
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +HD +L A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHDGNELEAINIST 70
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ L+ +DVIGIDE QF +
Sbjct: 71 SRDILLQDLSHVDVIGIDEIQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V+ E +A G VVVA LD F+ F + ++ ++E V KL AVC
Sbjct: 95 ---------KEIVNIVEKLAENGHRVVVAGLDMDFRGEPFEPMPQIMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI--GQEKEV 350
C ++ T+R+ GQ +V
Sbjct: 146 AVCGSSSSRTQRLIDGQPAKV 166
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS-AVELNKLIPHTKDIDV 75
RR+RR YA + ++ + A DDRY EKV +HD +L A++ + + L+ +DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHDGNELEAINISTSRDILLQDLSHVDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF ++V+ E +A G VVVA LD F+ F + ++ ++E V KL AV
Sbjct: 85 IGIDEIQFFDKEIVNIVEKLAENGHRVVVAGLDMDFRGEPFEPMPQIMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI--GQEKEV 154
C C ++ T+R+ GQ +V
Sbjct: 145 CAVCGSSSSRTQRLIDGQPAKV 166
>gi|357060495|ref|ZP_09121263.1| thymidine kinase [Alloprevotella rava F0323]
gi|355375800|gb|EHG23068.1| thymidine kinase [Alloprevotella rava F0323]
Length = 197
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A I + D RY E V +HD + ++ ++ D +V+GI
Sbjct: 32 RRLKRAQFARQNVEIYKPTIDTRYSEENVVSHDSNYIKSMPVDAPESILLLASDAEVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V + MA+AGK V+VA LD F T F + +L+ +AE V K+ A+C+
Sbjct: 92 DEAQFFDETLVDVCKKMADAGKRVIVAGLDMDFLGTPFGPMPALMAIAEDVTKVHAICVR 151
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A F+ RI + EK+V+LG
Sbjct: 152 CGNLAQFSHRIVKGEKQVMLG 172
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A I + D RY E V +HD + ++
Sbjct: 16 EVICGSMFSGKTEELIRRLKRAQFARQNVEIYKPTIDTRYSEENVVSHDSNYIKSMPVDA 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ D +V+GIDE QF + + + VC++
Sbjct: 76 PESILLLASDAEVVGIDEAQFFD-----ETLVDVCKK----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
MA+AGK V+VA LD F T F + +L+ +AE V K+ A+C+
Sbjct: 108 -----------------MADAGKRVIVAGLDMDFLGTPFGPMPALMAIAEDVTKVHAICV 150
Query: 333 SCFRDAAFTKRIGQ-EKEVRI 352
C A F+ RI + EK+V +
Sbjct: 151 RCGNLAQFSHRIVKGEKQVML 171
>gi|228474933|ref|ZP_04059662.1| thymidine kinase [Staphylococcus hominis SK119]
gi|314935932|ref|ZP_07843282.1| thymidine kinase [Staphylococcus hominis subsp. hominis C80]
gi|418618993|ref|ZP_13181836.1| thymidine kinase [Staphylococcus hominis VCU122]
gi|228271165|gb|EEK12545.1| thymidine kinase [Staphylococcus hominis SK119]
gi|313655938|gb|EFS19680.1| thymidine kinase [Staphylococcus hominis subsp. hominis C80]
gi|374825854|gb|EHR89773.1| thymidine kinase [Staphylococcus hominis VCU122]
Length = 199
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 94/202 (46%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS-AV 211
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +HD +L A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNELEAINIST 70
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L+ + DVIGIDE QF + NE
Sbjct: 71 AREILLQNLSQFDVIGIDEIQFFD-------------------------------NE--- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V E +A G VVVA LD F+ F+ + ++ ++E V KL AVC
Sbjct: 97 -----------IVHIVEKLAEDGHRVVVAGLDMDFRGEPFDPMPQIMAVSEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ + RI+
Sbjct: 146 AICGSSSSRTQRLINGQPARID 167
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS-AVELNKLIPHTKDIDV 75
RR+RR YA + ++ + A DDRY EKV +HD +L A++ + L+ + DV
Sbjct: 25 LIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHDGNELEAINISTAREILLQNLSQFDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF + +V E +A G VVVA LD F+ F+ + ++ ++E V KL AV
Sbjct: 85 IGIDEIQFFDNEIVHIVEKLAEDGHRVVVAGLDMDFRGEPFDPMPQIMAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAICGSSSSRTQRL 158
>gi|429742002|ref|ZP_19275649.1| thymidine kinase [Porphyromonas catoniae F0037]
gi|429157643|gb|EKY00224.1| thymidine kinase [Porphyromonas catoniae F0037]
Length = 194
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR+RR + A R I + + D RYD +V +HD + +
Sbjct: 17 EVVCGSMFSGKTEELIRRLRRAKIAGLRVEIFKPSIDTRYDDVQVVSHDHNTILSTPVDN 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ ++DVIGIDE QF +
Sbjct: 77 SSNILLLASEVDVIGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
P+VV E++A+ G V++A LD F+R F + +L +A+ V+K+ A+C+
Sbjct: 100 -----ERLPEVV---EALADQGIRVIIAGLDLDFKRKPFGPMATLCAIADSVDKIHAICV 151
Query: 333 SCFRDAAFTKRI 344
C A ++ R+
Sbjct: 152 ECGSWANYSYRL 163
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 84/144 (58%), Gaps = 8/144 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR + A R I + + D RYD +V +HD + + + ++ ++DVIGI
Sbjct: 33 RRLRRAKIAGLRVEIFKPSIDTRYDDVQVVSHDHNTILSTPVDNSSNILLLASEVDVIGI 92
Query: 79 DEGQFF----PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
DE QFF P+VV E++A+ G V++A LD F+R F + +L +A+ V+K+ A+
Sbjct: 93 DEAQFFDERLPEVV---EALADQGIRVIIAGLDLDFKRKPFGPMATLCAIADSVDKIHAI 149
Query: 135 CMSCFRDAAFTKR-IGQEKEVILG 157
C+ C A ++ R + E++V+LG
Sbjct: 150 CVECGSWANYSYRLVSGEQQVMLG 173
>gi|325102795|ref|YP_004272449.1| thymidine kinase [Pedobacter saltans DSM 12145]
gi|324971643|gb|ADY50627.1| Thymidine kinase [Pedobacter saltans DSM 12145]
Length = 188
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 86/200 (43%), Gaps = 45/200 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
K G EVI G MFSGKT ELIRR+ R + A I + D RYD V +H+
Sbjct: 4 NKEFGGSIEVICGSMFSGKTEELIRRLTRAKIAKLNVEIFKPKTDTRYDESAVVSHNANA 63
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ ++ + ++ + D++VIGIDE QF +
Sbjct: 64 IPSIPVENSSAILLYGSDVEVIGIDEAQFFD----------------------------- 94
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
E PDV +AN G V+VA LD F F I +L+ +AE V
Sbjct: 95 -------------DELPDVCV---KLANKGIRVIVAGLDMDFTGKPFGPIPALMAIAEDV 138
Query: 325 EKLTAVCMSCFRDAAFTKRI 344
K+ AVCM C A ++ R+
Sbjct: 139 TKVQAVCMKCGAPALYSLRL 158
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR+ R + A I + D RYD V +H+ + ++ + ++ + D++V
Sbjct: 25 ELIRRLTRAKIAKLNVEIFKPKTDTRYDESAVVSHNANAIPSIPVENSSAILLYGSDVEV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D + +AN G V+VA LD F F I +L+ +AE V K+ AV
Sbjct: 85 IGIDEAQFFDDELPDVCVKLANKGIRVIVAGLDMDFTGKPFGPIPALMAIAEDVTKVQAV 144
Query: 135 CMSCFRDAAFTKRIGQE-KEVILG 157
CM C A ++ R+ +V+LG
Sbjct: 145 CMKCGAPALYSLRLNSNPNKVLLG 168
>gi|317503773|ref|ZP_07961785.1| thymidine kinase [Prevotella salivae DSM 15606]
gi|315665070|gb|EFV04725.1| thymidine kinase [Prevotella salivae DSM 15606]
Length = 209
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 45/196 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY E V +HDQ + +
Sbjct: 29 EVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDQNSIHSTPISS 88
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ D + VC E
Sbjct: 89 SASILLLASDIDVVGIDEAQFLD-----DNLVEVCNE----------------------- 120
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 121 -----------------LANRGIRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICV 163
Query: 333 SCFRDAAFTKRIGQEK 348
C A + R+ Q +
Sbjct: 164 RCGALAYVSHRLVQNE 179
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 45 RRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDQNSIHSTPISSSASILLLASDIDVVGI 104
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF D +V +AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 105 DEAQFLDDNLVEVCNELANRGIRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICVR 164
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A + R+ Q E V+LG
Sbjct: 165 CGALAYVSHRLVQNEHRVMLG 185
>gi|315660274|ref|ZP_07913129.1| thymidine kinase [Staphylococcus lugdunensis M23590]
gi|315494701|gb|EFU83041.1| thymidine kinase [Staphylococcus lugdunensis M23590]
Length = 208
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A D+RY EKV +H+ + A++ V +++ ++DV
Sbjct: 34 LIRRLRRGIYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEAINIVAAKEILSQDLTNVDV 93
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V AE +A G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 94 IGIDEVQFFDDQIVDIAEQLAENGHRVIVAGLDMDFKGEPFEPMPKLLAVSEQVTKLQAV 153
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 154 CAVCGSPSSRTQRL 167
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 48/203 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A D+RY EKV +H+ + A++ V
Sbjct: 20 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEAINIVA 79
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ ++DVIGIDE QF
Sbjct: 80 AKEILSQDLTNVDVIGIDEVQF-------------------------------------- 101
Query: 272 LNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D +V AE +A G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 102 --------FDDQIVDIAEQLAENGHRVIVAGLDMDFKGEPFEPMPKLLAVSEQVTKLQAV 153
Query: 331 CMSCFRDAAFTKRIGQEKEVRIE 353
C C ++ T+R+ + +I+
Sbjct: 154 CAVCGSPSSRTQRLINGQPAKID 176
>gi|269121661|ref|YP_003309838.1| thymidine kinase [Sebaldella termitidis ATCC 33386]
gi|268615539|gb|ACZ09907.1| Thymidine kinase [Sebaldella termitidis ATCC 33386]
Length = 357
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 87/172 (50%), Gaps = 8/172 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRY--DTEKVATHDQQKLTAVSAVE---LNKLIPHTK 71
RR+RR +YA + + + A D RY D + +H Q K+ A+ A + + + + +
Sbjct: 27 LIRRLRRAKYAKQKTAVFKPAIDKRYEGDDVNIVSHSQNKIEAILAKDVSVMEEYLENNP 86
Query: 72 DIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
DI VIGIDE QFF DVV+F E GK VVVA LD F+ + + L+ A+ V+K
Sbjct: 87 DIQVIGIDEAQFFGEDVVAFCEKCVKLGKRVVVAGLDMNFRGEPYEPMPRLMATADYVDK 146
Query: 131 LTAVCMSCFRDAAFTKRI--GQEKEVILGPMFSGKTTELIRRIRRYQYANYR 180
A+C C A T+RI G+ +F G T R RR+ YR
Sbjct: 147 FHAICTVCGNPAYVTQRIINGEPAYYDDPVLFVGTTESYEARCRRHHIVKYR 198
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 90/197 (45%), Gaps = 50/197 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS--THDQQKLTAVSA 210
EV+ G MFSGK+ ELIRR+RR +YA + + + A D RY+ + V+ +H Q K+ A+ A
Sbjct: 13 EVVTGSMFSGKSEELIRRLRRAKYAKQKTAVFKPAIDKRYEGDDVNIVSHSQNKIEAILA 72
Query: 211 VE---LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+ + + + + DI VIGIDE QF G D
Sbjct: 73 KDVSVMEEYLENNPDIQVIGIDEAQFF----GED-------------------------- 102
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
VV+F E GK VVVA LD F+ + + L+ A+ V+K
Sbjct: 103 ---------------VVAFCEKCVKLGKRVVVAGLDMNFRGEPYEPMPRLMATADYVDKF 147
Query: 328 TAVCMSCFRDAAFTKRI 344
A+C C A T+RI
Sbjct: 148 HAICTVCGNPAYVTQRI 164
>gi|289550266|ref|YP_003471170.1| thymidine kinase [Staphylococcus lugdunensis HKU09-01]
gi|385783894|ref|YP_005760067.1| putative thymidine kinase [Staphylococcus lugdunensis N920143]
gi|418415217|ref|ZP_12988423.1| thymidine kinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418636156|ref|ZP_13198508.1| thymidine kinase [Staphylococcus lugdunensis VCU139]
gi|289179798|gb|ADC87043.1| Thymidine kinase [Staphylococcus lugdunensis HKU09-01]
gi|339894150|emb|CCB53414.1| putative thymidine kinase [Staphylococcus lugdunensis N920143]
gi|374841155|gb|EHS04634.1| thymidine kinase [Staphylococcus lugdunensis VCU139]
gi|410875224|gb|EKS23149.1| thymidine kinase [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 199
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A D+RY EKV +H+ + A++ V +++ ++DV
Sbjct: 25 LIRRLRRGIYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEAINIVAAKEILSQDLTNVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +V AE +A G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFDDQIVDIAEQLAENGHRVIVAGLDMDFKGEPFEPMPKLLAVSEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSPSSRTQRL 158
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 48/203 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A D+RY EKV +H+ + A++ V
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEAINIVA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ ++DVIGIDE QF
Sbjct: 71 AKEILSQDLTNVDVIGIDEVQF-------------------------------------- 92
Query: 272 LNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D +V AE +A G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 93 --------FDDQIVDIAEQLAENGHRVIVAGLDMDFKGEPFEPMPKLLAVSEQVTKLQAV 144
Query: 331 CMSCFRDAAFTKRIGQEKEVRIE 353
C C ++ T+R+ + +I+
Sbjct: 145 CAVCGSPSSRTQRLINGQPAKID 167
>gi|297624294|ref|YP_003705728.1| thymidine kinase [Truepera radiovictrix DSM 17093]
gi|297165474|gb|ADI15185.1| Thymidine kinase [Truepera radiovictrix DSM 17093]
Length = 204
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I+GPMFSGK+ ELIRR+ R A R + + A D RY + V++H+ + L A++ +
Sbjct: 12 ELIVGPMFSGKSEELIRRVTRAFIAKQRVQVFKPALDGRYHAQAVASHNGRTLEALAVSD 71
Query: 213 LNKL-IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ ++ ++ + V+ IDEGQF+ +AA
Sbjct: 72 VEEMRAALSEAVQVVAIDEGQFL----------------------------------SAA 97
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
L V FA +A +GK V++A LD F+ F + L+ AE V KLTAVC
Sbjct: 98 L-----------VGFACDLAESGKRVMIAGLDLDFRAEPFGPMPELLSRAESVTKLTAVC 146
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 147 VRCGAPATRTQRL 159
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-IPHTKDIDVIG 77
RR+ R A R + + A D RY + VA+H+ + L A++ ++ ++ ++ + V+
Sbjct: 28 RRVTRAFIAKQRVQVFKPALDGRYHAQAVASHNGRTLEALAVSDVEEMRAALSEAVQVVA 87
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDEGQF +V FA +A +GK V++A LD F+ F + L+ AE V KLTAVC+
Sbjct: 88 IDEGQFLSAALVGFACDLAESGKRVMIAGLDLDFRAEPFGPMPELLSRAESVTKLTAVCV 147
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 148 RCGAPATRTQRL 159
>gi|20806669|ref|NP_621840.1| thymidine kinase [Thermoanaerobacter tengcongensis MB4]
gi|60390121|sp|Q8RDA1.1|KITH_THETN RecName: Full=Thymidine kinase
gi|20515119|gb|AAM23444.1| Thymidine kinase [Thermoanaerobacter tengcongensis MB4]
Length = 193
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPMFSGK+ ELIRRIRR Q A + + + A DDRY +KV +H+ + A+S +
Sbjct: 12 EVIVGPMFSGKSEELIRRIRRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGSSINAISVTK 71
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ +D V+ IDE QF +
Sbjct: 72 ASEILDLLEEDTQVVAIDEIQFFD------------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+C
Sbjct: 96 ---------HSLVDVVREIADMGKRVICAGLDMDFRGEPFGVTPDIMAIAESVDKLTAIC 146
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 147 VKCGNPATRTQRL 159
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDV 75
RRIRR Q A + + + A DDRY +KV +H+ + A+S + ++++ + D V
Sbjct: 26 LIRRIRRAQIAKQKVQVFKPAIDDRYSIDKVVSHNGSSINAISVTKASEILDLLEEDTQV 85
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF +V +A+ GK V+ A LD F+ F ++ +AE V+KLTA+
Sbjct: 86 VAIDEIQFFDHSLVDVVREIADMGKRVICAGLDMDFRGEPFGVTPDIMAIAESVDKLTAI 145
Query: 135 CMSCFRDAAFTKRI 148
C+ C A T+R+
Sbjct: 146 CVKCGNPATRTQRL 159
>gi|423302818|ref|ZP_17280840.1| thymidine kinase [Bacteroides finegoldii CL09T03C10]
gi|408470694|gb|EKJ89228.1| thymidine kinase [Bacteroides finegoldii CL09T03C10]
Length = 199
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HD + + ++ T +IDV+GI
Sbjct: 35 RRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSVSILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLVDVCNQLANNGIRVIVAGLDMDFKGNPFGPMPQLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + EK+V+LG
Sbjct: 155 CGQLASFSHRTVKNEKQVLLG 175
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 94/207 (45%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF +
Sbjct: 71 IASTPIDSSVSILLFTSEIDVVGIDEAQFFD----------------------------- 101
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+V +AN G V+VA LD F+ F + L +A+ V
Sbjct: 102 ----------------SGLVDVCNQLANNGIRVIVAGLDMDFKGNPFGPMPQLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + EK+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNEKQV 172
>gi|189468267|ref|ZP_03017052.1| hypothetical protein BACINT_04663 [Bacteroides intestinalis DSM
17393]
gi|189436531|gb|EDV05516.1| thymidine kinase [Bacteroides intestinalis DSM 17393]
Length = 201
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD + +
Sbjct: 19 EVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTPIDS 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T +IDV+GIDE QF + + + VC E
Sbjct: 79 SASILLFTSEIDVVGIDEAQFFD-----NGLIDVCNE----------------------- 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 111 -----------------LANNGIRVIVAGLDMDFRGFPFGPMPGLCAIADEVSKVHAICV 153
Query: 333 SCFRDAAFTKR 343
C + A+F+ R
Sbjct: 154 KCGQLASFSHR 164
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDNGLIDVCNELANNGIRVIVAGLDMDFRGFPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|88803789|ref|ZP_01119312.1| thymidine kinase [Polaribacter irgensii 23-P]
gi|88780317|gb|EAR11499.1| thymidine kinase [Polaribacter irgensii 23-P]
Length = 211
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A R I + + D RYD + V +H+ K+ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPSLDTRYDADAVVSHNDNKIRSTPVPV 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + D+DV+GIDE QF + D+ +AVC +
Sbjct: 77 SSNIRLLVNDVDVVGIDEAQFFD-----DEIVAVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
A ++ R Q ++
Sbjct: 152 HTGNLAHYSFRKAQNDKI 169
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR++R Q+A R I + + D RYD + V +H+ K+ + + + D+DV+
Sbjct: 31 LIRRLKRAQFAKQRVEIFKPSLDTRYDADAVVSHNDNKIRSTPVPVSSNIRLLVNDVDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF D +V+ +AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 91 GIDEAQFFDDEIVAVCNDLANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVC 150
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
A ++ R Q ++++
Sbjct: 151 THTGNLAHYSFRKAQNDKIVM 171
>gi|340355730|ref|ZP_08678406.1| thymidine kinase [Sporosarcina newyorkensis 2681]
gi|339622138|gb|EGQ26669.1| thymidine kinase [Sporosarcina newyorkensis 2681]
Length = 198
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 90/198 (45%), Gaps = 48/198 (24%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI G MFSGK+ ELIRRIRR ++A + + + A DDRY E V +HD + A
Sbjct: 7 GGWMEVICGSMFSGKSEELIRRIRRAEFAKQKIAVFKPAIDDRYSEEAVVSHDGTSMIAN 66
Query: 209 SAVELNKLIPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
N+ IP+ T D DV+ IDE QF +
Sbjct: 67 PIARANE-IPNLVTDDFDVVAIDEAQFFD------------------------------- 94
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+++ A S+A+ G V++A LD F+ F + L+ +AE V K
Sbjct: 95 --------------EEILDVAISLADRGFRVIIAGLDQDFRGEPFGPMPRLMAVAELVTK 140
Query: 327 LTAVCMSCFRDAAFTKRI 344
L AVC C ++ T+R+
Sbjct: 141 LQAVCTVCGSPSSRTQRL 158
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH--TKDI 73
RRIRR ++A + + + A DDRY E V +HD + A N+ IP+ T D
Sbjct: 24 ELIRRIRRAEFAKQKIAVFKPAIDDRYSEEAVVSHDGTSMIANPIARANE-IPNLVTDDF 82
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ IDE QFF +++ A S+A+ G V++A LD F+ F + L+ +AE V KL
Sbjct: 83 DVVAIDEAQFFDEEILDVAISLADRGFRVIIAGLDQDFRGEPFGPMPRLMAVAELVTKLQ 142
Query: 133 AVCMSCFRDAAFTKRI 148
AVC C ++ T+R+
Sbjct: 143 AVCTVCGSPSSRTQRL 158
>gi|239637412|ref|ZP_04678394.1| thymidine kinase [Staphylococcus warneri L37603]
gi|239597012|gb|EEQ79527.1| thymidine kinase [Staphylococcus warneri L37603]
Length = 199
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHNGNAIEAINIST 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H DVIGIDE QF +EN
Sbjct: 71 AREILNHDISHADVIGIDEVQFF--------------------------------DEN-- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+VS + +A+ G V+VA LD F+ F + L+ L+E V KL AVC
Sbjct: 97 -----------IVSIIQQLADQGHRVIVAGLDMDFKGEPFEPMPELLALSEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 AVCGGPSSRTQRL 158
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ +++ H DV
Sbjct: 25 LIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHNGNAIEAINISTAREILNHDISHADV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF ++VS + +A+ G V+VA LD F+ F + L+ L+E V KL AV
Sbjct: 85 IGIDEVQFFDENIVSIIQQLADQGHRVIVAGLDMDFKGEPFEPMPELLALSEHVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGGPSSRTQRL 158
>gi|443693903|gb|ELT95171.1| hypothetical protein CAPTEDRAFT_55599, partial [Capitella teleta]
Length = 196
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 94/198 (47%), Gaps = 53/198 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAVE 212
+ILGPMF+GKT+ LI + + A+ C+++ + R+ T ++ TH + A+S
Sbjct: 7 LILGPMFAGKTSRLINEVNDAKKADLECVVITHDDSHRFSTRTEIVTHALMRCPAISLAS 66
Query: 213 LNKLIPHTKDI-----DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
L+++ +D+ D+I IDEGQF + Q+
Sbjct: 67 LSEV---PRDLLVNPPDLIAIDEGQF-----------------FSQE------------- 93
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
E+ LN F E MAN G VVVA L GTF RT F D+L +IP AE + L
Sbjct: 94 EDELLN------------FCEMMANMGVRVVVAGLSGTFHRTPFWDLLKIIPCAEEITHL 141
Query: 328 TAVCMSCFRD--AAFTKR 343
+ C SC + A FT+R
Sbjct: 142 NSRCSSCVEEYKAVFTQR 159
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 15/133 (11%)
Query: 27 ANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKDI-----DVIGIDE 80
A+ C+++ + R+ T ++ TH + A+S L+++ +D+ D+I IDE
Sbjct: 30 ADLECVVITHDDSHRFSTRTEIVTHALMRCPAISLASLSEV---PRDLLVNPPDLIAIDE 86
Query: 81 GQFFP----DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
GQFF ++++F E MAN G VVVA L GTF RT F D+L +IP AE + L + C
Sbjct: 87 GQFFSQEEDELLNFCEMMANMGVRVVVAGLSGTFHRTPFWDLLKIIPCAEEITHLNSRCS 146
Query: 137 SCFRD--AAFTKR 147
SC + A FT+R
Sbjct: 147 SCVEEYKAVFTQR 159
>gi|417644450|ref|ZP_12294440.1| thymidine kinase [Staphylococcus warneri VCU121]
gi|445059135|ref|YP_007384539.1| thymidine kinase [Staphylococcus warneri SG1]
gi|330684819|gb|EGG96512.1| thymidine kinase [Staphylococcus epidermidis VCU121]
gi|443425192|gb|AGC90095.1| thymidine kinase [Staphylococcus warneri SG1]
Length = 199
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHNGNAIEAINIST 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H DVIGIDE QF +EN
Sbjct: 71 AREILNHDLSHADVIGIDEVQFF--------------------------------DEN-- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+VS + +A+ G V+VA LD F+ F + L+ L+E V KL AVC
Sbjct: 97 -----------IVSIIQQLADQGHRVIVAGLDMDFKGEPFEPMPKLLALSEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 AVCGGPSSRTQRL 158
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ +++ H DV
Sbjct: 25 LIRRLRRGIYAKQKVIVFKPAIDDRYHKEKVVSHNGNAIEAINISTAREILNHDLSHADV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF ++VS + +A+ G V+VA LD F+ F + L+ L+E V KL AV
Sbjct: 85 IGIDEVQFFDENIVSIIQQLADQGHRVIVAGLDMDFKGEPFEPMPKLLALSEHVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGGPSSRTQRL 158
>gi|294501882|ref|YP_003565582.1| thymidine kinase [Bacillus megaterium QM B1551]
gi|294351819|gb|ADE72148.1| thymidine kinase [Bacillus megaterium QM B1551]
Length = 207
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + + + A D+RY E V +H+ + A S
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTSVMAYSISA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ ++ DV+ IDE QF F T
Sbjct: 71 SRDILKRVNEETDVVAIDEVQF----------------------------FDT------- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ +S+A+ G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 96 ----------DILQIVQSLADQGFRVIVAGLDQDFKGEPFGQMPQLMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
SC A+ T+R+
Sbjct: 146 ASCGSPASRTQRL 158
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A + + + A D+RY E V +H+ + A S ++ ++ DV+
Sbjct: 27 RRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTSVMAYSISASRDILKRVNEETDVVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D++ +S+A+ G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDTDILQIVQSLADQGFRVIVAGLDQDFKGEPFGQMPQLMAIAESVTKLQAVCA 146
Query: 137 SCFRDAAFTKRI 148
SC A+ T+R+
Sbjct: 147 SCGSPASRTQRL 158
>gi|152977516|ref|YP_001377033.1| thymidine kinase [Bacillus cytotoxicus NVH 391-98]
gi|189028749|sp|A7GV80.1|KITH_BACCN RecName: Full=Thymidine kinase
gi|152026268|gb|ABS24038.1| Thymidine kinase [Bacillus cytotoxicus NVH 391-98]
Length = 194
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGMKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ + T+D++VI IDE QF +
Sbjct: 71 SKDIFKYVTEDMNVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------EDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEYVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + + T+D++VI
Sbjct: 27 RRVRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGMKVKAVPVSASKDIFKYVTEDMNVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDEDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEYVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|384044287|ref|YP_005492304.1| thymidine kinase [Bacillus megaterium WSH-002]
gi|345441978|gb|AEN86995.1| Thymidine kinase [Bacillus megaterium WSH-002]
Length = 208
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + + + A D+RY E V +H+ + A S
Sbjct: 12 EVICGSMFSGKSEELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTSVMAYSISA 71
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ ++ DV+ IDE QF F T
Sbjct: 72 SRDILKRVNEETDVVAIDEVQF----------------------------FDT------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ +S+A+ G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 97 ----------DILEIVQSLADQGFRVIVAGLDQDFKGEPFGQMPQLMAIAESVTKLQAVC 146
Query: 332 MSCFRDAAFTKRI 344
SC A+ T+R+
Sbjct: 147 ASCGSPASRTQRL 159
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDID 74
RR+RR Q+A + + + A D+RY E V +H+ + A S ++ ++ D
Sbjct: 25 ELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTSVMAYSISASRDILKRVNEETD 84
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+ IDE QFF D++ +S+A+ G V+VA LD F+ F + L+ +AE V KL A
Sbjct: 85 VVAIDEVQFFDTDILEIVQSLADQGFRVIVAGLDQDFKGEPFGQMPQLMAIAESVTKLQA 144
Query: 134 VCMSCFRDAAFTKRI 148
VC SC A+ T+R+
Sbjct: 145 VCASCGSPASRTQRL 159
>gi|254838357|gb|ACT83389.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 134
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 59 SAVELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDI 118
SA L +++ ++ D + +DEGQFFPD+ + AGK V+VAALDG F + F +
Sbjct: 1 SAGYLYEVMQRLEEYDAVAVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQV 60
Query: 119 LSLIPLAECVEKLTAVCMSC-FRDAAFTKRIGQEKEVI 155
+L+P+A+ ++KLTAVCM C RDA FT RI Q +++
Sbjct: 61 TALVPMADKLDKLTAVCMKCKMRDAPFTVRISQGTDLV 98
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDA 338
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM C RDA
Sbjct: 26 FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCMKCKMRDA 85
Query: 339 AFTKRIGQEKEV 350
FT RI Q ++
Sbjct: 86 PFTVRISQGTDL 97
>gi|269123520|ref|YP_003306097.1| thymidine kinase [Streptobacillus moniliformis DSM 12112]
gi|268314846|gb|ACZ01220.1| Thymidine kinase [Streptobacillus moniliformis DSM 12112]
Length = 358
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDI 73
RR+RR + +I +++ D RY + +H+Q+ + A + +E+ +I D+
Sbjct: 35 LIRRLRRESFTKQNVLIFKHSIDKRYGENGIFSHNQESIEAFPVSNVLEMENIISKHPDV 94
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+VIGIDE QFF +V+ F N GK VVVA LD F+ F + L+ A+ + KL
Sbjct: 95 EVIGIDEVQFFGKEVIEFCNKYVNIGKRVVVAGLDLDFKAEPFYPMPELLTYADSITKLK 154
Query: 133 AVCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR 191
A+CM C ++A ++R+ + P F ++ Y+ R IVR D R
Sbjct: 155 AICMVCGKEAYASQRL-----INGNPAFKDDPIVMVGASENYEARCRRHHIVRDRNDKR 208
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 52/197 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK+ ELIRR+RR + +I +++ D RY + +H+Q+ + A +
Sbjct: 21 EVICGSMFSGKSEELIRRLRRESFTKQNVLIFKHSIDKRYGENGIFSHNQESIEAFPVSN 80
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFV--EVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+E+ +I D++VIGIDE QF EVI +KY+
Sbjct: 81 VLEMENIISKHPDVEVIGIDEVQFFGKEVIEFCNKYV----------------------- 117
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
N GK VVVA LD F+ F + L+ A+ + KL
Sbjct: 118 ------------------------NIGKRVVVAGLDLDFKAEPFYPMPELLTYADSITKL 153
Query: 328 TAVCMSCFRDAAFTKRI 344
A+CM C ++A ++R+
Sbjct: 154 KAICMVCGKEAYASQRL 170
>gi|282879127|ref|ZP_06287886.1| thymidine kinase [Prevotella buccalis ATCC 35310]
gi|281298769|gb|EFA91179.1| thymidine kinase [Prevotella buccalis ATCC 35310]
Length = 206
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR +A R I + A D RY E V +HDQ + +
Sbjct: 16 EVICGSMFSGKTEELIRRMRRASFAKQRVEIFKPAIDTRYSEENVVSHDQHAIQSTPVDS 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ + D DV+GIDE QF + D + VC E
Sbjct: 76 SSSILLLSSDADVVGIDEAQFFD-----DGLVKVCNE----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD FQ F I L +A+ V K+ A+C+
Sbjct: 108 -----------------LANKGVRVIIAGLDMDFQGKPFGPIPGLCAIADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRIGQ 346
C A + R+ Q
Sbjct: 151 KCGALAYISHRLVQ 164
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR +A R I + A D RY E V +HDQ + + + ++ + D DV+GI
Sbjct: 32 RRMRRASFAKQRVEIFKPAIDTRYSEENVVSHDQHAIQSTPVDSSSSILLLSSDADVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V++A LD FQ F I L +A+ V K+ A+C+
Sbjct: 92 DEAQFFDDGLVKVCNELANKGVRVIIAGLDMDFQGKPFGPIPGLCAIADEVTKVHAICVK 151
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A + R+ Q +K V+LG
Sbjct: 152 CGALAYISHRLVQNDKRVLLG 172
>gi|160885073|ref|ZP_02066076.1| hypothetical protein BACOVA_03071 [Bacteroides ovatus ATCC 8483]
gi|237718221|ref|ZP_04548702.1| thymidine kinase [Bacteroides sp. 2_2_4]
gi|262406787|ref|ZP_06083336.1| thymidine kinase [Bacteroides sp. 2_1_22]
gi|293370048|ref|ZP_06616615.1| thymidine kinase [Bacteroides ovatus SD CMC 3f]
gi|294646014|ref|ZP_06723679.1| thymidine kinase [Bacteroides ovatus SD CC 2a]
gi|294806045|ref|ZP_06764905.1| thymidine kinase [Bacteroides xylanisolvens SD CC 1b]
gi|298484322|ref|ZP_07002484.1| thymidine kinase [Bacteroides sp. D22]
gi|299147769|ref|ZP_07040832.1| thymidine kinase [Bacteroides sp. 3_1_23]
gi|336402833|ref|ZP_08583559.1| thymidine kinase [Bacteroides sp. 1_1_30]
gi|336416521|ref|ZP_08596854.1| thymidine kinase [Bacteroides ovatus 3_8_47FAA]
gi|345508782|ref|ZP_08788406.1| thymidine kinase [Bacteroides sp. D1]
gi|383112282|ref|ZP_09933079.1| thymidine kinase [Bacteroides sp. D2]
gi|423215622|ref|ZP_17202149.1| thymidine kinase [Bacteroides xylanisolvens CL03T12C04]
gi|423292218|ref|ZP_17270828.1| thymidine kinase [Bacteroides ovatus CL02T12C04]
gi|423297095|ref|ZP_17275165.1| thymidine kinase [Bacteroides ovatus CL03T12C18]
gi|156109423|gb|EDO11168.1| thymidine kinase [Bacteroides ovatus ATCC 8483]
gi|229446654|gb|EEO52445.1| thymidine kinase [Bacteroides sp. D1]
gi|229452405|gb|EEO58196.1| thymidine kinase [Bacteroides sp. 2_2_4]
gi|262355490|gb|EEZ04581.1| thymidine kinase [Bacteroides sp. 2_1_22]
gi|292634966|gb|EFF53488.1| thymidine kinase [Bacteroides ovatus SD CMC 3f]
gi|292638585|gb|EFF56938.1| thymidine kinase [Bacteroides ovatus SD CC 2a]
gi|294446764|gb|EFG15371.1| thymidine kinase [Bacteroides xylanisolvens SD CC 1b]
gi|295084672|emb|CBK66195.1| Thymidine kinase [Bacteroides xylanisolvens XB1A]
gi|298269512|gb|EFI11111.1| thymidine kinase [Bacteroides sp. D22]
gi|298513952|gb|EFI37838.1| thymidine kinase [Bacteroides sp. 3_1_23]
gi|313696410|gb|EFS33245.1| thymidine kinase [Bacteroides sp. D2]
gi|335937578|gb|EGM99476.1| thymidine kinase [Bacteroides ovatus 3_8_47FAA]
gi|335947597|gb|EGN09383.1| thymidine kinase [Bacteroides sp. 1_1_30]
gi|392661875|gb|EIY55445.1| thymidine kinase [Bacteroides ovatus CL02T12C04]
gi|392668120|gb|EIY61623.1| thymidine kinase [Bacteroides ovatus CL03T12C18]
gi|392691599|gb|EIY84841.1| thymidine kinase [Bacteroides xylanisolvens CL03T12C04]
Length = 199
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HD + + ++ T +IDV+GI
Sbjct: 35 RRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V++A LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDVCNQLANNGIRVIIAGLDMDFKGNPFGPMPQLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + EK+V+LG
Sbjct: 155 CGQLASFSHRTVKNEKQVLLG 175
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDTRYSEEDVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V++A LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIIAGLDMDFKGNPFGPMPQLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + EK+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNEKQV 172
>gi|295707230|ref|YP_003600305.1| thymidine kinase [Bacillus megaterium DSM 319]
gi|294804889|gb|ADF41955.1| thymidine kinase [Bacillus megaterium DSM 319]
Length = 208
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + + + A D+RY E V +H+ + A S
Sbjct: 12 EVICGSMFSGKSEELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTSVMAYSISA 71
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ ++ DV+ IDE QF F T
Sbjct: 72 SRDILKRVDEETDVVAIDEVQF----------------------------FDT------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ +S+A+ G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 97 ----------DILEIVQSLADQGFRVIVAGLDQDFKGEPFGQMPQLMAIAESVTKLQAVC 146
Query: 332 MSCFRDAAFTKRI 344
SC A+ T+R+
Sbjct: 147 ASCGSPASRTQRL 159
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDID 74
RR+RR Q+A + + + A D+RY E V +H+ + A S ++ ++ D
Sbjct: 25 ELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTSVMAYSISASRDILKRVDEETD 84
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+ IDE QFF D++ +S+A+ G V+VA LD F+ F + L+ +AE V KL A
Sbjct: 85 VVAIDEVQFFDTDILEIVQSLADQGFRVIVAGLDQDFKGEPFGQMPQLMAIAESVTKLQA 144
Query: 134 VCMSCFRDAAFTKRI 148
VC SC A+ T+R+
Sbjct: 145 VCASCGSPASRTQRL 159
>gi|392970039|ref|ZP_10335448.1| thymidine kinase [Staphylococcus equorum subsp. equorum Mu2]
gi|403046012|ref|ZP_10901487.1| thymidine kinase [Staphylococcus sp. OJ82]
gi|392511967|emb|CCI58655.1| thymidine kinase [Staphylococcus equorum subsp. equorum Mu2]
gi|402764174|gb|EJX18261.1| thymidine kinase [Staphylococcus sp. OJ82]
Length = 199
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY +K+ +H+ + A++
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINIST 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H D DVIGIDE QF E
Sbjct: 71 AAEILKHDLSDTDVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
VV+ E +A G V+ A LD F+ F I L+ ++E V KL AVC
Sbjct: 95 ---------EGVVNIVEQLAKKGHRVITAGLDMDFRGEPFEPIPHLLAVSEEVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 AVCGASSSRTQRL 158
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY +K+ +H+ + A++ +++ H D DV
Sbjct: 25 LIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINISTAAEILKHDLSDTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF + VV+ E +A G V+ A LD F+ F I L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFEEGVVNIVEQLAKKGHRVITAGLDMDFRGEPFEPIPHLLAVSEEVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGASSSRTQRL 158
>gi|260666065|ref|YP_003213019.1| hypothetical protein H665_p196 [Ostreococcus tauri virus 1]
gi|260161083|emb|CAY39784.1| hypothetical protein OTV1_196 [Ostreococcus tauri virus 1]
Length = 183
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 50/203 (24%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+G MFSGKT+ELIRR++RY+ + +++ KD R E + THD + + +
Sbjct: 5 IIMGNMFSGKTSELIRRLKRYRIIGKKIVVINSTKDTRSPEEVLKTHDGIEFPCIKVDHI 64
Query: 214 NKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ I D +++ IDE QF FK L +
Sbjct: 65 SHCIVKQSFCDAEIVAIDEAQF----------------------------FKNLKD---- 92
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D+ F GK V++A LDG +Q+ F ++L IP+A V KL+A+C
Sbjct: 93 --------FVDMCLF------LGKSVILAGLDGDYQQKKFGEVLDCIPMASDVVKLSALC 138
Query: 332 MSCFRD--AAFTKRIGQEKEVRI 352
M C FTKRI Q E+ +
Sbjct: 139 MDCRNGTPGPFTKRIVQSDELEL 161
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DIDVI 76
RR++RY+ + +++ KD R E + THD + + ++ I D +++
Sbjct: 20 RRLKRYRIIGKKIVVINSTKDTRSPEEVLKTHDGIEFPCIKVDHISHCIVKQSFCDAEIV 79
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++ F + GK V++A LDG +Q+ F ++L IP+A V KL+A+CM
Sbjct: 80 AIDEAQFFKNLKDFVDMCLFLGKSVILAGLDGDYQQKKFGEVLDCIPMASDVVKLSALCM 139
Query: 137 SCFRD--AAFTKRIGQEKEVIL 156
C FTKRI Q E+ L
Sbjct: 140 DCRNGTPGPFTKRIVQSDELEL 161
>gi|260905908|ref|ZP_05914230.1| thymidine kinase [Brevibacterium linens BL2]
Length = 202
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 47/203 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
+ R +VI GPMFSGK+ EL+RR+RR + A +++ ++ D R +++H
Sbjct: 6 SPRQAGRLDVIAGPMFSGKSEELMRRVRRAKIAGVNVLVLSHSLDTRSTLSAITSHTGVN 65
Query: 205 LTAVSAVELNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPF 262
+ AV ++ L + H +D D+I IDE QF
Sbjct: 66 IPAVPVGDVESLAEVAHAEDYDLIAIDEAQFFG--------------------------- 98
Query: 263 KTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
PD+V+ + G V+V L TF F + + + +AE
Sbjct: 99 ------------------PDLVATVFELVERGATVIVEGLSVTFDGDPFEPMPTFMAVAE 140
Query: 323 CVEKLTAVCMSCFRDAAFTKRIG 345
V KLTAVC C RDA F +R+G
Sbjct: 141 DVLKLTAVCTICGRDAVFHQRVG 163
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHTKDID 74
RR+RR + A +++ ++ D R + +H + AV ++ L + H +D D
Sbjct: 28 LMRRVRRAKIAGVNVLVLSHSLDTRSTLSAITSHTGVNIPAVPVGDVESLAEVAHAEDYD 87
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+I IDE QFF PD+V+ + G V+V L TF F + + + +AE V KLTA
Sbjct: 88 LIAIDEAQFFGPDLVATVFELVERGATVIVEGLSVTFDGDPFEPMPTFMAVAEDVLKLTA 147
Query: 134 VCMSCFRDAAFTKRIG 149
VC C RDA F +R+G
Sbjct: 148 VCTICGRDAVFHQRVG 163
>gi|314055283|ref|YP_004063621.1| thymidine kinase [Ostreococcus tauri virus 2]
gi|313575174|emb|CBI70187.1| thymidine kinase [Ostreococcus tauri virus 2]
gi|388548603|gb|AFK65805.1| thymidine kinase [Ostreococcus lucimarinus virus OlV6]
gi|388548857|gb|AFK66058.1| thymidine kinase [Ostreococcus lucimarinus virus OlV3]
Length = 203
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 50/203 (24%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+G MFSGKT+ELIRR++RY+ N + +++ +KD R E ++THD + + +
Sbjct: 5 IIMGNMFSGKTSELIRRLKRYKVLNKKVVVINSSKDTRSPEEVINTHDGVQFPCLKVDHI 64
Query: 214 NKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ I + D++ IDE QF
Sbjct: 65 SHCIIKESFCNADIVAIDEAQF-------------------------------------- 86
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F ++ F E K V++A LDG +++ F +++ IPLA V KL+A+C
Sbjct: 87 --------FTNLKEFVEMCLFLNKSVIIAGLDGDYKQRKFGEVIDCIPLASDVTKLSALC 138
Query: 332 MSCFRD--AAFTKRIGQEKEVRI 352
M C FTKRI Q ++ +
Sbjct: 139 MDCKNGTPGPFTKRIVQNDDLEL 161
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DIDVI 76
RR++RY+ N + +++ +KD R E + THD + + ++ I + D++
Sbjct: 20 RRLKRYKVLNKKVVVINSSKDTRSPEEVINTHDGVQFPCLKVDHISHCIIKESFCNADIV 79
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++ F E K V++A LDG +++ F +++ IPLA V KL+A+CM
Sbjct: 80 AIDEAQFFTNLKEFVEMCLFLNKSVIIAGLDGDYKQRKFGEVIDCIPLASDVTKLSALCM 139
Query: 137 SCFRD--AAFTKRIGQEKEVIL 156
C FTKRI Q ++ L
Sbjct: 140 DCKNGTPGPFTKRIVQNDDLEL 161
>gi|300771399|ref|ZP_07081275.1| thymidine kinase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762069|gb|EFK58889.1| thymidine kinase [Sphingobacterium spiritivorum ATCC 33861]
Length = 192
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A I + + D RYD ++V +HDQ +++
Sbjct: 19 EVICGSMFSGKTEELIRRLKRAQFAKLNVEIFKPSVDIRYDEQRVVSHDQNSISSTPVSN 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ + D V+GIDE QF +
Sbjct: 79 SSAILLLSADTRVVGIDEAQFFD------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
E P+V +AN G V+VA LD F+ F I +++ +AE V K+ AVC+
Sbjct: 102 -----DELPNVCV---QLANKGLRVIVAGLDMDFKGKPFGPIPAIMAVAEHVTKVHAVCV 153
Query: 333 SCFRDAAFTKRI 344
C A ++ R+
Sbjct: 154 RCGAPANYSYRL 165
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A I + + D RYD ++V +HDQ +++ + ++ + D V+GI
Sbjct: 35 RRLKRAQFAKLNVEIFKPSVDIRYDEQRVVSHDQNSISSTPVSNSSAILLLSADTRVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D + + +AN G V+VA LD F+ F I +++ +AE V K+ AVC+
Sbjct: 95 DEAQFFDDELPNVCVQLANKGLRVIVAGLDMDFKGKPFGPIPAIMAVAEHVTKVHAVCVR 154
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A ++ R+ +K+V+LG
Sbjct: 155 CGAPANYSYRLTNNDKQVLLG 175
>gi|427387300|ref|ZP_18883356.1| thymidine kinase [Bacteroides oleiciplenus YIT 12058]
gi|425725461|gb|EKU88332.1| thymidine kinase [Bacteroides oleiciplenus YIT 12058]
Length = 201
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDVCNQLANNGVRVIVAGLDMDFRGLPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD + +
Sbjct: 19 EVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEEEVVSHDSHSIASTPIDS 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T +IDV+GIDE QF + + VC +
Sbjct: 79 SASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ----------------------- 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 111 -----------------LANNGVRVIVAGLDMDFRGLPFGPMPGLCAIADEVSKVHAICV 153
Query: 333 SCFRDAAFTKR 343
C + A+F+ R
Sbjct: 154 KCGQLASFSHR 164
>gi|86134587|ref|ZP_01053169.1| Thymidine kinase [Polaribacter sp. MED152]
gi|85821450|gb|EAQ42597.1| Thymidine kinase [Polaribacter sp. MED152]
Length = 219
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 89/194 (45%), Gaps = 45/194 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A R I + A D RYD E+V +H+ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPAVDTRYDEEEVVSHNDSRIRSTPVPV 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + D+DV+GIDE QF + D+ +AVC +
Sbjct: 77 SSNIRLLANDVDVVGIDEAQFFD-----DEIVAVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGVRVIVAGLDMDFKGKPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKRIGQ 346
A ++ R Q
Sbjct: 152 HTGNLAHYSFRKAQ 165
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR++R Q+A R I + A D RYD E+V +H+ ++ + + + D+DV+
Sbjct: 31 LIRRLKRAQFAKQRVEIFKPAVDTRYDEEEVVSHNDSRIRSTPVPVSSNIRLLANDVDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 91 GIDEAQFFDDEIVAVCNDLANRGVRVIVAGLDMDFKGKPFGPMPALMATAEYVTKVHAVC 150
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
A ++ R Q +++
Sbjct: 151 THTGNLAHYSFRKAQNDNLVM 171
>gi|229087821|ref|ZP_04219937.1| Thymidine kinase [Bacillus cereus Rock3-44]
gi|228695496|gb|EEL48365.1| Thymidine kinase [Bacillus cereus Rock3-44]
Length = 194
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRIRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ + T+++DVI IDE QF +
Sbjct: 71 SKDIFDYITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR Q+A ++ + D+RY E V +H+ K+ AV + + T+++DVI
Sbjct: 27 RRIRRTQFAKQNAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFDYITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQILANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|255917856|pdb|3E2I|A Chain A, Crystal Structure Of Thymidine Kinase From S. Aureus
Length = 219
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY EKV +H+ + A++ + +++ H ++DV
Sbjct: 45 LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIXTHDLTNVDV 104
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D +VS E ++ G V+VA LD F+ F L ++E V KL AV
Sbjct: 105 IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDXDFRGEPFEPXPKLXAVSEQVTKLQAV 164
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 165 CAVCGSSSSRTQRL 178
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G FSGK+ ELIRR+RR YA + ++ + A DDRY EKV +H+ + A++ +
Sbjct: 31 ECITGSXFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 90
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++DVIGIDE QF +
Sbjct: 91 ASEIXTHDLTNVDVIGIDEVQFFD------------------------------------ 114
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E ++ G V+VA LD F+ F L ++E V KL AVC
Sbjct: 115 ---------DEIVSIVEKLSADGHRVIVAGLDXDFRGEPFEPXPKLXAVSEQVTKLQAVC 165
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +I+
Sbjct: 166 AVCGSSSSRTQRLINGKPAKID 187
>gi|153808651|ref|ZP_01961319.1| hypothetical protein BACCAC_02950 [Bacteroides caccae ATCC 43185]
gi|423220735|ref|ZP_17207229.1| thymidine kinase [Bacteroides caccae CL03T12C61]
gi|149128477|gb|EDM19695.1| thymidine kinase [Bacteroides caccae ATCC 43185]
gi|392622781|gb|EIY16896.1| thymidine kinase [Bacteroides caccae CL03T12C61]
Length = 199
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 46/199 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF +
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD----------------------------- 101
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
++ +AN G V++A LD F+ F + L +A+ V
Sbjct: 102 ----------------SGLIDICNQLANNGVRVIIAGLDMDFKGNPFGPMPQLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR 343
K+ A+C+ C + A+F+ R
Sbjct: 146 SKVHAICVKCGQLASFSHR 164
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HD + + ++ T +IDV+GI
Sbjct: 35 RRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V++A LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDICNQLANNGVRVIIAGLDMDFKGNPFGPMPQLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|296084994|emb|CBI28409.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 17/192 (8%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDI 73
RRI+ +++ +KD RY T+ + THD K + +L+ + +
Sbjct: 11 RRIKSESNNGRNVAMIKSSKDTRYATDSIVTHDGVKFPCWALPDLSSFRQKFGAEAYEKL 70
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+VIGIDE QFF D+ F +A+ GK V+VA LDG + R F +L +IPLA+ V KLT
Sbjct: 71 EVIGIDEAQFFEDLYDFCCEVADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVTKLT 130
Query: 133 AVCMSCFRDAAFTKRIGQE--KEVILGPMFSGKTTELIRRIRRYQYANYRCMI--VRYAK 188
A C C + A FT R +E E+I G ++ + R Y N + +I R A
Sbjct: 131 ARCELCGKRAFFTLRKIEEMQTELIGG-------ADIYMPVCRQHYVNGQAVIEAARNAL 183
Query: 189 DDRYDTEKVSTH 200
+ R D + H
Sbjct: 184 ESRKDKVQSDPH 195
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 85/199 (42%), Gaps = 50/199 (25%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL-- 216
MF+GKTT L+RRI+ +++ +KD RY T+ + THD K + +L+
Sbjct: 1 MFAGKTTALLRRIKSESNNGRNVAMIKSSKDTRYATDSIVTHDGVKFPCWALPDLSSFRQ 60
Query: 217 ---IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
+ ++VIGIDE QF E D Y C
Sbjct: 61 KFGAEAYEKLEVIGIDEAQFFE-----DLYDFCC-------------------------- 89
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
E + GK V+VA LDG + R F +L +IPLA+ V KLTA C
Sbjct: 90 --------------EVADHDGKTVIVAGLDGDYLRRSFGSVLDVIPLADSVTKLTARCEL 135
Query: 334 CFRDAAFTKRIGQEKEVRI 352
C + A FT R +E + +
Sbjct: 136 CGKRAFFTLRKIEEMQTEL 154
>gi|410697367|gb|AFV76435.1| thymidine kinase [Thermus oshimai JL-2]
Length = 192
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPMFSGK+ ELIRR++R A + ++ + DDRY E V +HD +++ A+
Sbjct: 12 EVIVGPMFSGKSEELIRRVKRALIARQKVLVFKPRLDDRYHLEAVVSHDGERIEAIPVGS 71
Query: 213 LNKLIPHTKDI-DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H + +V+ +DE QF++
Sbjct: 72 AEEMEAHLSPLPEVVAVDEVQFLDR----------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V AE++A G V++A LD F+ F + L+ AE VEKLTA+C
Sbjct: 97 ----------GLVGLAEALAGRGVRVILAGLDLDFRGEPFGIMPELLARAEFVEKLTAIC 146
Query: 332 MSCFRDAAFTKRIGQEKEVR 351
C A T+R+ K R
Sbjct: 147 PRCGAPATRTQRLVDGKPAR 166
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-DV 75
RR++R A + ++ + DDRY E V +HD +++ A+ ++ H + +V
Sbjct: 26 LIRRVKRALIARQKVLVFKPRLDDRYHLEAVVSHDGERIEAIPVGSAEEMEAHLSPLPEV 85
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ +DE QF +V AE++A G V++A LD F+ F + L+ AE VEKLTA+
Sbjct: 86 VAVDEVQFLDRGLVGLAEALAGRGVRVILAGLDLDFRGEPFGIMPELLARAEFVEKLTAI 145
Query: 135 CMSCFRDAAFTKRI 148
C C A T+R+
Sbjct: 146 CPRCGAPATRTQRL 159
>gi|383120059|ref|ZP_09940793.1| thymidine kinase [Bacteroides sp. 1_1_6]
gi|382985164|gb|EES66407.2| thymidine kinase [Bacteroides sp. 1_1_6]
Length = 175
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HD + + ++ T +IDV+GI
Sbjct: 11 RRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 70
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D ++ +AN G V++A LD F+ F + L +A+ V K+ A+C+
Sbjct: 71 DEAQFFDDGLIDVCRQLANNGIRVIIAGLDMDFKGNPFGPMPQLCAIADEVSKVHAICVK 130
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A+F+ R + +K+V+LG
Sbjct: 131 CGDLASFSHRTVKNDKQVLLG 151
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR++R ++A R I + A D RY E V +HD + + ++
Sbjct: 1 MFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEEDVVSHDSHSIASTPIDSSASILL 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
T +IDV+GIDE QF + D + VCR+
Sbjct: 61 FTSEIDVVGIDEAQFFD-----DGLIDVCRQ----------------------------- 86
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
+AN G V++A LD F+ F + L +A+ V K+ A+C+ C A
Sbjct: 87 -----------LANNGIRVIIAGLDMDFKGNPFGPMPQLCAIADEVSKVHAICVKCGDLA 135
Query: 339 AFTKR-IGQEKEV 350
+F+ R + +K+V
Sbjct: 136 SFSHRTVKNDKQV 148
>gi|224139492|ref|XP_002323138.1| predicted protein [Populus trichocarpa]
gi|222867768|gb|EEF04899.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 90/209 (43%), Gaps = 54/209 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E VI+GPMF+GKTT L+ R++ I++ KD+RY + V THD KL +
Sbjct: 27 EIHVIVGPMFAGKTTTLLHRVQAEINDGRNVAIIKSNKDNRYGLDSVVTHDGVKLPCCAL 86
Query: 211 VELNKLIPH-----TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
L+ +DVIGIDE QF
Sbjct: 87 PNLSSFKQSFGQDAYDQLDVIGIDEAQF-------------------------------- 114
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ F +A+ GK V+VA LDG + R F +L +IPLA+ V
Sbjct: 115 --------------FGDLYDFCREVADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSV 160
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEVRIE 353
KL+A C C + A FT R + +E R E
Sbjct: 161 TKLSARCEICGKRAFFTLR--KTEETRTE 187
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-----TKDIDVIGIDEGQFFPDV 87
I++ KD+RY + V THD KL + L+ +DVIGIDE QFF D+
Sbjct: 59 IIKSNKDNRYGLDSVVTHDGVKLPCCALPNLSSFKQSFGQDAYDQLDVIGIDEAQFFGDL 118
Query: 88 VSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
F +A+ GK V+VA LDG + R F +L +IPLA+ V KL+A C C + A FT
Sbjct: 119 YDFCREVADHDGKTVIVAGLDGDYLRRSFGSVLDIIPLADSVTKLSARCEICGKRAFFTL 178
Query: 147 RIGQE--KEVILG 157
R +E E+I G
Sbjct: 179 RKTEETRTELIGG 191
>gi|345519750|ref|ZP_08799163.1| thymidine kinase [Bacteroides sp. 4_3_47FAA]
gi|423312605|ref|ZP_17290542.1| thymidine kinase [Bacteroides vulgatus CL09T03C04]
gi|345457095|gb|EET16432.2| thymidine kinase [Bacteroides sp. 4_3_47FAA]
gi|392687339|gb|EIY80632.1| thymidine kinase [Bacteroides vulgatus CL09T03C04]
Length = 175
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ + D DV+GI
Sbjct: 11 RRLKRAKFARQRVEIFKPAIDTRYSEEEVVSHDSNSIASTPIDSSASILLFSSDKDVVGI 70
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +A+ G V+VA LD F+R F I +L+ +A+ V K+ A+C+
Sbjct: 71 DEAQFFDEGLVDVCNKLADNGIRVIVAGLDMDFRRVPFGPIPALLAIADEVTKVHAICVK 130
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A T RI + EK V+LG
Sbjct: 131 CGNLAYATHRITKSEKRVLLG 151
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 45/191 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR++R ++A R I + A D RY E+V +HD + + ++
Sbjct: 1 MFSGKTEELIRRLKRAKFARQRVEIFKPAIDTRYSEEEVVSHDSNSIASTPIDSSASILL 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
+ D DV+GIDE QF + + + VC +
Sbjct: 61 FSSDKDVVGIDEAQFFD-----EGLVDVCNK----------------------------- 86
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
+A+ G V+VA LD F+R F I +L+ +A+ V K+ A+C+ C A
Sbjct: 87 -----------LADNGIRVIVAGLDMDFRRVPFGPIPALLAIADEVTKVHAICVKCGNLA 135
Query: 339 AFTKRIGQEKE 349
T RI + ++
Sbjct: 136 YATHRITKSEK 146
>gi|206901092|ref|YP_002250518.1| thymidine kinase [Dictyoglomus thermophilum H-6-12]
gi|238056554|sp|B5YDB0.1|KITH_DICT6 RecName: Full=Thymidine kinase
gi|206740195|gb|ACI19253.1| thymidine kinase [Dictyoglomus thermophilum H-6-12]
Length = 198
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G M+SGK+ ELIRR+RR Q A + + +++ D RYD + V++H K+ A+ S
Sbjct: 12 EVICGGMYSGKSEELIRRVRRAQIAKQKVQVFKHSLDIRYDKDYVASHTGLKIEAIPVSS 71
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ ++ +L+ D V+ I+EGQF + M + + C
Sbjct: 72 SADIERLV--EDDTQVVAIEEGQFFD--------MGIVKVC------------------- 102
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+ +A+ GK V+VA LD F+ F + L+ +AE V+KL A
Sbjct: 103 ------------------QRLADKGKRVIVAGLDQDFRGEPFGPMPYLMAVAEYVDKLHA 144
Query: 330 VCMSCFRDAAFTKRI 344
+CM C A+ T+RI
Sbjct: 145 ICMKCGNVASRTQRI 159
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q A + + +++ D RYD + VA+H K+ A+ S+ ++ +L+ D V
Sbjct: 28 RRVRRAQIAKQKVQVFKHSLDIRYDKDYVASHTGLKIEAIPVSSSADIERLV--EDDTQV 85
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ I+EGQFF +V + +A+ GK V+VA LD F+ F + L+ +AE V+KL A+
Sbjct: 86 VAIEEGQFFDMGIVKVCQRLADKGKRVIVAGLDQDFRGEPFGPMPYLMAVAEYVDKLHAI 145
Query: 135 CMSCFRDAAFTKRI 148
CM C A+ T+RI
Sbjct: 146 CMKCGNVASRTQRI 159
>gi|317475119|ref|ZP_07934387.1| thymidine kinase [Bacteroides eggerthii 1_2_48FAA]
gi|316908763|gb|EFV30449.1| thymidine kinase [Bacteroides eggerthii 1_2_48FAA]
Length = 202
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIYKPAIDTRYSEADVVSHDSHT 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----ESLINVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIVAGLDMDFRGNPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNDKQV 172
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRLKRAKFARQRVEIYKPAIDTRYSEADVVSHDSHTISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDESLINVCNQLANNGIRVIVAGLDMDFRGNPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|150004389|ref|YP_001299133.1| thymidine kinase [Bacteroides vulgatus ATCC 8482]
gi|294776784|ref|ZP_06742247.1| thymidine kinase [Bacteroides vulgatus PC510]
gi|319643362|ref|ZP_07997988.1| thymidine kinase [Bacteroides sp. 3_1_40A]
gi|166220761|sp|A6L1E7.1|KITH_BACV8 RecName: Full=Thymidine kinase
gi|149932813|gb|ABR39511.1| thymidine kinase [Bacteroides vulgatus ATCC 8482]
gi|294449260|gb|EFG17797.1| thymidine kinase [Bacteroides vulgatus PC510]
gi|317384991|gb|EFV65944.1| thymidine kinase [Bacteroides sp. 3_1_40A]
Length = 199
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ + D DV+GI
Sbjct: 35 RRLKRAKFARQRVEIFKPAIDTRYSEEEVVSHDSNSIASTPIDSSASILLFSSDKDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +A+ G V+VA LD F+R F I +L+ +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLVDVCNKLADNGIRVIVAGLDMDFRRVPFGPIPALLAIADEVTKVHAICVK 154
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A T RI + EK V+LG
Sbjct: 155 CGNLAYATHRITKSEKRVLLG 175
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 94/207 (45%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAIDTRYSEEEVVSHDSNS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ + D DV+GIDE QF +
Sbjct: 71 IASTPIDSSASILLFSSDKDVVGIDEAQFFD----------------------------- 101
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+V +A+ G V+VA LD F+R F I +L+ +A+ V
Sbjct: 102 ----------------EGLVDVCNKLADNGIRVIVAGLDMDFRRVPFGPIPALLAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKRIGQ-EKEV 350
K+ A+C+ C A T RI + EK V
Sbjct: 146 TKVHAICVKCGNLAYATHRITKSEKRV 172
>gi|73662074|ref|YP_300855.1| thymidine kinase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|109892498|sp|Q49Z66.1|KITH_STAS1 RecName: Full=Thymidine kinase
gi|72494589|dbj|BAE17910.1| thymidine kinase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 199
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY +K+ +H+ + A++
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINIST 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++DVIGIDE QF E
Sbjct: 71 AAEILKHDLSEVDVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V AE +A G V+ A LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------NGIVHIAEQLAEKGHRVITAGLDMDFRAQPFEPMPQLMAVSEDVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 AVCGASSSRTQRL 158
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY +K+ +H+ + A++ +++ H ++DV
Sbjct: 25 LIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINISTAAEILKHDLSEVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF + +V AE +A G V+ A LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFENGIVHIAEQLAEKGHRVITAGLDMDFRAQPFEPMPQLMAVSEDVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGASSSRTQRL 158
>gi|212693715|ref|ZP_03301843.1| hypothetical protein BACDOR_03235 [Bacteroides dorei DSM 17855]
gi|212663736|gb|EEB24310.1| thymidine kinase [Bacteroides dorei DSM 17855]
Length = 199
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 46/200 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ + D DV+GIDE QF + + + VC +
Sbjct: 71 IASTPIDSSASILLFSSDKDVVGIDEAQFFD-----EGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+A+ G V+VA LD F+R F I +L+ +A+ V
Sbjct: 111 -------------------------LADNGIRVIVAGLDMDFKRIPFGPIPALLAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKRI 344
K+ A+C+ C A T RI
Sbjct: 146 TKVHAICVKCGNLAYATHRI 165
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ + D DV+GI
Sbjct: 35 RRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNSIASTPIDSSASILLFSSDKDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ +A+ G V+VA LD F+R F I +L+ +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLIDVCNQLADNGIRVIVAGLDMDFKRIPFGPIPALLAIADEVTKVHAICVK 154
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A T RI + +K V+LG
Sbjct: 155 CGNLAYATHRITKSDKRVLLG 175
>gi|299141365|ref|ZP_07034502.1| thymidine kinase [Prevotella oris C735]
gi|298577325|gb|EFI49194.1| thymidine kinase [Prevotella oris C735]
Length = 194
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RY E V +HDQ + +
Sbjct: 16 EVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDQNSIHSTPIDA 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ D + VC E
Sbjct: 76 SGAILLLASDIDVVGIDEAQFLD-----DNLVDVCNE----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 108 -----------------LANRGIRVIIAGLDMDFKGVPFGPIPALCAIADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 KCGALAYVSHRL 162
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 32 RRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDQNSIHSTPIDASGAILLLASDIDVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF D +V +AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 92 DEAQFLDDNLVDVCNELANRGIRVIIAGLDMDFKGVPFGPIPALCAIADEVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + E V+LG
Sbjct: 152 CGALAYVSHRLVADEHRVMLG 172
>gi|150388165|ref|YP_001318214.1| thymidine kinase [Alkaliphilus metalliredigens QYMF]
gi|149948027|gb|ABR46555.1| Thymidine kinase [Alkaliphilus metalliredigens QYMF]
Length = 195
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPM++GK+ ELIRRI R + A + + + + D+RY + +++H+ ++L + +
Sbjct: 14 EVIVGPMYAGKSEELIRRINRAEIAELKVLAFKPSIDNRYSAQHITSHNGKQLKCIPVKD 73
Query: 213 LNKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+++ + +D D++ IDE QF+ D+ + VC++
Sbjct: 74 AKEVMEYIEKQDFDILAIDEVQFL-----GDEVLKVCQD--------------------- 107
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN GK V+ + LD F+ F + +L+ +AE V KLTAV
Sbjct: 108 -------------------VANRGKRVICSGLDMDFRGEPFQVVPNLMAIAEHVTKLTAV 148
Query: 331 CMSCFRDAAFTKRI 344
CM+C A T+R+
Sbjct: 149 CMTCKMPATRTQRL 162
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDIDVI 76
RRI R + A + + + + D+RY + + +H+ ++L + + +++ + +D D++
Sbjct: 30 RRINRAEIAELKVLAFKPSIDNRYSAQHITSHNGKQLKCIPVKDAKEVMEYIEKQDFDIL 89
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IDE QF D V+ + +AN GK V+ + LD F+ F + +L+ +AE V KLTAVC
Sbjct: 90 AIDEVQFLGDEVLKVCQDVANRGKRVICSGLDMDFRGEPFQVVPNLMAIAEHVTKLTAVC 149
Query: 136 MSCFRDAAFTKRI 148
M+C A T+R+
Sbjct: 150 MTCKMPATRTQRL 162
>gi|15806982|ref|NP_295707.1| thymidine kinase [Deinococcus radiodurans R1]
gi|60390158|sp|Q9RSY5.1|KITH_DEIRA RecName: Full=Thymidine kinase
gi|6459773|gb|AAF11536.1|AE002036_7 thymidine kinase [Deinococcus radiodurans R1]
Length = 212
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 89/207 (42%), Gaps = 56/207 (27%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EV++GPMFSGK+ ELIRR+ R A R + + A D+RY +V++H + L AV
Sbjct: 8 GGHLEVVVGPMFSGKSEELIRRLTRSLIARQRVAVFKPAIDNRYHASEVASHAGRTLEAV 67
Query: 209 SAVELNK-----------LIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPI 257
+ + L + +DVIGIDE QF
Sbjct: 68 AVPDAQAIRAQLSGQGELLSAAPEGVDVIGIDEAQFFG---------------------- 105
Query: 258 KRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSL 317
P++V +A+AG VV+A LD F+ F + L
Sbjct: 106 -----------------------PELVPLVLELADAGVRVVLAGLDLDFRAEPFGSMPEL 142
Query: 318 IPLAECVEKLTAVCMSCFRDAAFTKRI 344
+ AE V+KLTA+C C A T+R+
Sbjct: 143 LARAESVDKLTAICTVCGAPATRTQRL 169
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNK----------- 65
RR+ R A R + + A D+RY +VA+H + L AV+ +
Sbjct: 26 LIRRLTRSLIARQRVAVFKPAIDNRYHASEVASHAGRTLEAVAVPDAQAIRAQLSGQGEL 85
Query: 66 LIPHTKDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPL 124
L + +DVIGIDE QFF P++V +A+AG VV+A LD F+ F + L+
Sbjct: 86 LSAAPEGVDVIGIDEAQFFGPELVPLVLELADAGVRVVLAGLDLDFRAEPFGSMPELLAR 145
Query: 125 AECVEKLTAVCMSCFRDAAFTKRI 148
AE V+KLTA+C C A T+R+
Sbjct: 146 AESVDKLTAICTVCGAPATRTQRL 169
>gi|237709237|ref|ZP_04539718.1| thymidine kinase [Bacteroides sp. 9_1_42FAA]
gi|265754914|ref|ZP_06089828.1| thymidine kinase [Bacteroides sp. 3_1_33FAA]
gi|229456622|gb|EEO62343.1| thymidine kinase [Bacteroides sp. 9_1_42FAA]
gi|263234525|gb|EEZ20104.1| thymidine kinase [Bacteroides sp. 3_1_33FAA]
Length = 199
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 46/200 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ + D DV+GIDE QF + + + VC +
Sbjct: 71 IASTPIDSSASILLFSSDKDVVGIDEAQFFD-----EGLVDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+A+ G V+VA LD F+R F I +L+ +A+ V
Sbjct: 111 -------------------------LADNGIRVIVAGLDMDFKRIPFGPIPALLAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKRI 344
K+ A+C+ C A T RI
Sbjct: 146 TKVHAICVKCGNLAYATHRI 165
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ + D DV+GI
Sbjct: 35 RRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNSIASTPIDSSASILLFSSDKDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +A+ G V+VA LD F+R F I +L+ +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLVDVCNQLADNGIRVIVAGLDMDFKRIPFGPIPALLAIADEVTKVHAICVK 154
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A T RI + +K V+LG
Sbjct: 155 CGNLAYATHRITKSDKRVLLG 175
>gi|229000117|ref|ZP_04159687.1| Thymidine kinase [Bacillus mycoides Rock3-17]
gi|229007637|ref|ZP_04165231.1| Thymidine kinase [Bacillus mycoides Rock1-4]
gi|228753648|gb|EEM03092.1| Thymidine kinase [Bacillus mycoides Rock1-4]
gi|228759654|gb|EEM08630.1| Thymidine kinase [Bacillus mycoides Rock3-17]
Length = 194
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A ++ + D+RY E V +H+ K+ AV
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H T+++DVI IDE QF +
Sbjct: 71 SKDIFNHITEEMDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + +AN V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------GDIVEVVQILANRDYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A ++ + D+RY E V +H+ K+ AV + H T+++DVI
Sbjct: 27 RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHITEEMDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V + +AN V+VA LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDGDIVEVVQILANRDYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|281423597|ref|ZP_06254510.1| thymidine kinase [Prevotella oris F0302]
gi|281402417|gb|EFB33248.1| thymidine kinase [Prevotella oris F0302]
Length = 194
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RY E V +HDQ + +
Sbjct: 16 EVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDQNSIHSTPIDA 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ D + VC E
Sbjct: 76 SGAILLLASDIDVVGIDEAQFLD-----DNLVDVCNE----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 108 -----------------LANRGIRVIIAGLDMDFKGVPFGPIPALCAIADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 KCGALAYVSHRL 162
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 32 RRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDQNSIHSTPIDASGAILLLASDIDVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF D +V +AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 92 DEAQFLDDNLVDVCNELANRGIRVIIAGLDMDFKGVPFGPIPALCAIADEVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + E V+LG
Sbjct: 152 CGALAYVSHRLVADEHRVMLG 172
>gi|329957471|ref|ZP_08297946.1| thymidine kinase [Bacteroides clarus YIT 12056]
gi|328522348|gb|EGF49457.1| thymidine kinase [Bacteroides clarus YIT 12056]
Length = 201
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSHT 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----EGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIVAGLDMDFRGNPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNDKQV 172
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSHTISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLIDVCNQLANNGIRVIVAGLDMDFRGNPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|392396493|ref|YP_006433094.1| thymidine kinase [Flexibacter litoralis DSM 6794]
gi|390527571|gb|AFM03301.1| thymidine kinase [Flexibacter litoralis DSM 6794]
Length = 211
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 90/158 (56%), Gaps = 7/158 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIP--HTKDIDVI 76
RR+ R + A I + A D RYD +KV +H+Q ++ +++ + + ++ K+ VI
Sbjct: 36 RRLTRAKIARQSVQIFKPAIDTRYDDQKVVSHNQNEIDSIAVEKASDILTLLKEKNYQVI 95
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF ++++ + +AN GK +V+A LD F F + L+ +AE V K+ A+C
Sbjct: 96 GIDEAQFFDKELLNICQILANQGKRIVIAGLDMDFAGKPFGIMPQLLAIAEYVTKVHAIC 155
Query: 136 MSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRR 173
M C + AA++ R+ K+ IL G+ TE R R+
Sbjct: 156 MCCGKVAAYSFRLTPSKQKIL----LGEKTEYEARCRK 189
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 47/203 (23%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EV+ G MFSGKT ELIRR+ R + A I + A D RYD +KV +H+Q ++ ++
Sbjct: 16 GGWIEVVCGSMFSGKTEELIRRLTRAKIARQSVQIFKPAIDTRYDDQKVVSHNQNEIDSI 75
Query: 209 SAVELNKLIP--HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ + + ++ K+ VIGIDE QF +
Sbjct: 76 AVEKASDILTLLKEKNYQVIGIDEAQFFD------------------------------- 104
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
++++ + +AN GK +V+A LD F F + L+ +AE V K
Sbjct: 105 --------------KELLNICQILANQGKRIVIAGLDMDFAGKPFGIMPQLLAIAEYVTK 150
Query: 327 LTAVCMSCFRDAAFTKRIGQEKE 349
+ A+CM C + AA++ R+ K+
Sbjct: 151 VHAICMCCGKVAAYSFRLTPSKQ 173
>gi|345513352|ref|ZP_08792874.1| thymidine kinase [Bacteroides dorei 5_1_36/D4]
gi|345456266|gb|EEO47102.2| thymidine kinase [Bacteroides dorei 5_1_36/D4]
Length = 224
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 46/200 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD
Sbjct: 37 TRRKGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNS 95
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ + D DV+GIDE QF + + + VC +
Sbjct: 96 IASTPIDSSASILLFSSDKDVVGIDEAQFFD-----EGLVDVCNQ--------------- 135
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+A+ G V+VA LD F+R F I +L+ +A+ V
Sbjct: 136 -------------------------LADNGIRVIVAGLDMDFKRIPFGPIPALLAIADEV 170
Query: 325 EKLTAVCMSCFRDAAFTKRI 344
K+ A+C+ C A T RI
Sbjct: 171 TKVHAICVKCGNLAYATHRI 190
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ + D DV+GI
Sbjct: 60 RRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNSIASTPIDSSASILLFSSDKDVVGI 119
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +A+ G V+VA LD F+R F I +L+ +A+ V K+ A+C+
Sbjct: 120 DEAQFFDEGLVDVCNQLADNGIRVIVAGLDMDFKRIPFGPIPALLAIADEVTKVHAICVK 179
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A T RI + +K V+LG
Sbjct: 180 CGNLAYATHRITKSDKRVLLG 200
>gi|281421272|ref|ZP_06252271.1| thymidine kinase [Prevotella copri DSM 18205]
gi|281404807|gb|EFB35487.1| thymidine kinase [Prevotella copri DSM 18205]
Length = 194
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R ++A + I + A D RY E V +HDQ + +
Sbjct: 16 EVVCGSMFSGKTEELIRRMKRAKFAKQKVEIFKPALDTRYSEEDVVSHDQNSIRSTPIES 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ + + VC E
Sbjct: 76 SGSILLLASDIDVVGIDEAQFLD-----NGLVEVCNE----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 108 -----------------LANRGVRVIVAGLDMDFKGVPFGPIPALCAIADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 KCGSVAYVSHRL 162
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 32 RRMKRAKFAKQKVEIFKPALDTRYSEEDVVSHDQNSIRSTPIESSGSILLLASDIDVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 92 DEAQFLDNGLVEVCNELANRGVRVIVAGLDMDFKGVPFGPIPALCAIADEVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + +K V+LG
Sbjct: 152 CGSVAYVSHRLVNNDKRVLLG 172
>gi|218129151|ref|ZP_03457955.1| hypothetical protein BACEGG_00726 [Bacteroides eggerthii DSM 20697]
gi|217988670|gb|EEC54989.1| thymidine kinase [Bacteroides eggerthii DSM 20697]
Length = 202
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 92/199 (46%), Gaps = 46/199 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSHT 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----EGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIVAGLDMDFRGNPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR 343
K+ A+C+ C + A+F+ R
Sbjct: 146 SKVHAICVKCGQLASFSHR 164
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSHTISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLIDVCNQLANNGIRVIVAGLDMDFRGNPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|423232549|ref|ZP_17218949.1| thymidine kinase [Bacteroides dorei CL02T00C15]
gi|423242037|ref|ZP_17223147.1| thymidine kinase [Bacteroides dorei CL03T12C01]
gi|423247238|ref|ZP_17228288.1| thymidine kinase [Bacteroides dorei CL02T12C06]
gi|392623986|gb|EIY18082.1| thymidine kinase [Bacteroides dorei CL02T00C15]
gi|392633102|gb|EIY27051.1| thymidine kinase [Bacteroides dorei CL02T12C06]
gi|392639781|gb|EIY33589.1| thymidine kinase [Bacteroides dorei CL03T12C01]
Length = 224
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 46/202 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD
Sbjct: 37 TRRRGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNS 95
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ + D DV+GIDE QF + + + VC +
Sbjct: 96 IASTPIDSSASILLFSSDKDVVGIDEAQFFD-----EGLVDVCNQ--------------- 135
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+A+ G V+VA LD F+R F I +L+ +A+ V
Sbjct: 136 -------------------------LADNGIRVIVAGLDMDFKRIPFGPIPALLAIADEV 170
Query: 325 EKLTAVCMSCFRDAAFTKRIGQ 346
K+ A+C+ C A T RI +
Sbjct: 171 TKVHAICVKCGNLAYATHRITK 192
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ + D DV+GI
Sbjct: 60 RRLKRAKFARQRVEIFKPAMDTRYSEEEVVSHDSNSIASTPIDSSASILLFSSDKDVVGI 119
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +A+ G V+VA LD F+R F I +L+ +A+ V K+ A+C+
Sbjct: 120 DEAQFFDEGLVDVCNQLADNGIRVIVAGLDMDFKRIPFGPIPALLAIADEVTKVHAICVK 179
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A T RI + +K V+LG
Sbjct: 180 CGNLAYATHRITKSDKRVLLG 200
>gi|332666110|ref|YP_004448898.1| thymidine kinase [Haliscomenobacter hydrossis DSM 1100]
gi|332334924|gb|AEE52025.1| Thymidine kinase [Haliscomenobacter hydrossis DSM 1100]
Length = 191
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 45/210 (21%)
Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS 198
F + F EVI G MFSGKT ELIRR+RR + AN + I + D RYD KV
Sbjct: 2 FLEPHFKGHRSGWIEVICGSMFSGKTEELIRRLRRAKIANQQVEIFKPKVDTRYDESKVV 61
Query: 199 THDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIK 258
+HD + + ++L+ ++ + V+GIDE QF ++
Sbjct: 62 SHDANSIPSTPIEHSDQLLALSERVSVVGIDEAQFFDL---------------------- 99
Query: 259 RSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLI 318
D+ E +A G V+VA LD F+ F + SL+
Sbjct: 100 -----------------------DLPRNCEKLAMRGIRVIVAGLDMDFRGAPFGPVPSLL 136
Query: 319 PLAECVEKLTAVCMSCFRDAAFTKRIGQEK 348
+AE + K+ A+C C A + R+ +E+
Sbjct: 137 AIAEYITKVHAICPHCGNLATHSYRLSEEE 166
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR + AN + I + D RYD KV +HD + + ++L+ ++ + V+GI
Sbjct: 32 RRLRRAKIANQQVEIFKPKVDTRYDESKVVSHDANSIPSTPIEHSDQLLALSERVSVVGI 91
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D+ E +A G V+VA LD F+ F + SL+ +AE + K+ A+C
Sbjct: 92 DEAQFFDLDLPRNCEKLAMRGIRVIVAGLDMDFRGAPFGPVPSLLAIAEYITKVHAICPH 151
Query: 138 CFRDAAFTKRIGQEK-EVILG 157
C A + R+ +E+ V+LG
Sbjct: 152 CGNLATHSYRLSEEEATVVLG 172
>gi|325954627|ref|YP_004238287.1| thymidine kinase [Weeksella virosa DSM 16922]
gi|323437245|gb|ADX67709.1| Thymidine kinase [Weeksella virosa DSM 16922]
Length = 198
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR+RR ++A R I + A D RYD +V +H+Q + + + ++ D DV+
Sbjct: 31 LIRRLRRAEFAKQRVEIFKPAVDVRYDDTEVVSHNQNSIDSTPVDFSSSILLLANDCDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF D +V A +AN GK V++A LD F+ F + +L+ AE V K+ A+C
Sbjct: 91 GIDEAQFFDDGIVDVANQLANQGKRVIIAGLDMDFKGRPFGPMPNLMATAEYVTKVHAIC 150
Query: 136 MSCFRDAAFTKR-IGQEKEVILG 157
+ A ++ R I +K V LG
Sbjct: 151 VKTGNLANYSHRKIASDKLVELG 173
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 91/202 (45%), Gaps = 48/202 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR ++A R I + A D RYD +V +H+Q + +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAEFAKQRVEIFKPAVDVRYDDTEVVSHNQNSIDSTPVDF 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ D DV+GIDE QF
Sbjct: 77 SSSILLLANDCDVVGIDEAQF--------------------------------------- 97
Query: 273 NVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D +V A +AN GK V++A LD F+ F + +L+ AE V K+ A+C
Sbjct: 98 -------FDDGIVDVANQLANQGKRVIIAGLDMDFKGRPFGPMPNLMATAEYVTKVHAIC 150
Query: 332 MSCFRDAAFTKR-IGQEKEVRI 352
+ A ++ R I +K V +
Sbjct: 151 VKTGNLANYSHRKIASDKLVEL 172
>gi|154125632|gb|ABS59381.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125634|gb|ABS59382.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125636|gb|ABS59383.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125638|gb|ABS59384.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125640|gb|ABS59385.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125642|gb|ABS59386.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125644|gb|ABS59387.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125646|gb|ABS59388.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125648|gb|ABS59389.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125650|gb|ABS59390.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125652|gb|ABS59391.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125654|gb|ABS59392.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125656|gb|ABS59393.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125658|gb|ABS59394.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125660|gb|ABS59395.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125662|gb|ABS59396.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125664|gb|ABS59397.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125666|gb|ABS59398.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125668|gb|ABS59399.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125670|gb|ABS59400.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125672|gb|ABS59401.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125674|gb|ABS59402.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|154125676|gb|ABS59403.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|207059676|dbj|BAG71887.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 136
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 63 LNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLI 122
L +++ ++ D + +DEGQFFPD+ + AGK V+VAALDG F + F + +L+
Sbjct: 3 LYEVMQRLEEYDAVAVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALV 62
Query: 123 PLAECVEKLTAVCMSC-FRDAAFTKRIGQEKEVI 155
P+A+ ++KLTAVCM C RDA FT RI Q +++
Sbjct: 63 PMADKLDKLTAVCMKCKMRDAPFTVRISQGTDLV 96
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDA 338
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM C RDA
Sbjct: 24 FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCMKCKMRDA 83
Query: 339 AFTKRIGQEKEV 350
FT RI Q ++
Sbjct: 84 PFTVRISQGTDL 95
>gi|380803763|gb|AFE73757.1| thymidine kinase, cytosolic, partial [Macaca mulatta]
Length = 70
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 48/58 (82%)
Query: 295 KIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
K V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV +
Sbjct: 1 KTVIVAALDGTFQRKPFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEV 58
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 47/56 (83%)
Query: 99 KIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
K V+VAALDGTFQR F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV
Sbjct: 1 KTVIVAALDGTFQRKPFGTILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEV 56
>gi|374385695|ref|ZP_09643198.1| hypothetical protein HMPREF9449_01584 [Odoribacter laneus YIT
12061]
gi|373225397|gb|EHP47731.1| hypothetical protein HMPREF9449_01584 [Odoribacter laneus YIT
12061]
Length = 204
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 45/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + D RY E+V +HD + +
Sbjct: 13 EVICGSMFSGKTEELIRRLKRAQFARQKVEIFKPKIDIRYSEEEVVSHDANAIRSTPVEN 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T D+DV+GIDE QF +
Sbjct: 73 SGNILLLTGDVDVVGIDEAQFFDA------------------------------------ 96
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++V + +AN G V+VA LD F F + L+ +AE V K+ A+C+
Sbjct: 97 ---------NIVEVCQKLANNGIRVIVAGLDMDFLGKPFGPMPQLMAIAEYVSKVHAICV 147
Query: 333 SCFRDAAFTKRIG 345
C A + R+
Sbjct: 148 HCGNLAHHSHRLA 160
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A + I + D RY E+V +HD + + ++ T D+DV+GI
Sbjct: 29 RRLKRAQFARQKVEIFKPKIDIRYSEEEVVSHDANAIRSTPVENSGNILLLTGDVDVVGI 88
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++V + +AN G V+VA LD F F + L+ +AE V K+ A+C+
Sbjct: 89 DEAQFFDANIVEVCQKLANNGIRVIVAGLDMDFLGKPFGPMPQLMAIAEYVSKVHAICVH 148
Query: 138 CFRDAAFTKRIG-QEKEVILG 157
C A + R+ ++ V+LG
Sbjct: 149 CGNLAHHSHRLADNDRLVVLG 169
>gi|217967192|ref|YP_002352698.1| thymidine kinase [Dictyoglomus turgidum DSM 6724]
gi|226729738|sp|B8E001.1|KITH_DICTD RecName: Full=Thymidine kinase
gi|217336291|gb|ACK42084.1| Thymidine kinase [Dictyoglomus turgidum DSM 6724]
Length = 198
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G M+SGK+ ELIRR+RR Q A + + +++ D RYD + V++H K+ A+ S
Sbjct: 12 EVICGGMYSGKSEELIRRVRRAQIAKQKVQVFKHSLDIRYDKDYVASHTGLKIEAIPVSS 71
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ ++ +L+ D V+ I+EGQF + M + + C
Sbjct: 72 SADIERLV--KDDTQVVAIEEGQFFD--------MGLVKVC------------------- 102
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+ +A+ GK V+VA LD F+ F + L+ +AE V+KL A
Sbjct: 103 ------------------QRLADRGKRVIVAGLDQDFRGEPFGPMPYLMAVAEYVDKLHA 144
Query: 330 VCMSCFRDAAFTKRI 344
+CM C A+ T+RI
Sbjct: 145 ICMKCGNVASRTQRI 159
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q A + + +++ D RYD + VA+H K+ A+ S+ ++ +L+ D V
Sbjct: 28 RRVRRAQIAKQKVQVFKHSLDIRYDKDYVASHTGLKIEAIPVSSSADIERLV--KDDTQV 85
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ I+EGQFF +V + +A+ GK V+VA LD F+ F + L+ +AE V+KL A+
Sbjct: 86 VAIEEGQFFDMGLVKVCQRLADRGKRVIVAGLDQDFRGEPFGPMPYLMAVAEYVDKLHAI 145
Query: 135 CMSCFRDAAFTKRI 148
CM C A+ T+RI
Sbjct: 146 CMKCGNVASRTQRI 159
>gi|425738332|ref|ZP_18856597.1| thymidine kinase [Staphylococcus massiliensis S46]
gi|425480005|gb|EKU47175.1| thymidine kinase [Staphylococcus massiliensis S46]
Length = 199
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS-AV 211
E I G MFSGK+ ELIRR+RR YA + ++ + A D+RY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKPAIDNRYHDEKVVSHNGNAIEAINISS 70
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ L+ + +D+IGIDE QF E
Sbjct: 71 ARDILLQDLESVDIIGIDEIQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V AE +A G V+VA LD F+ F+ + ++ ++E V KL AVC
Sbjct: 95 ---------EEIVHIAEKLAERGHRVIVAGLDMDFRGEPFDPVPKMMAVSEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVR 351
C ++ T+R+ K R
Sbjct: 146 SVCGASSSRTQRLIDGKPAR 165
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS-AVELNKLIPHTKDIDV 75
RR+RR YA + ++ + A D+RY EKV +H+ + A++ + + L+ + +D+
Sbjct: 25 LIRRLRRGVYAKQKVVVFKPAIDNRYHDEKVVSHNGNAIEAINISSARDILLQDLESVDI 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF + +V AE +A G V+VA LD F+ F+ + ++ ++E V KL AV
Sbjct: 85 IGIDEIQFFEEEIVHIAEKLAERGHRVIVAGLDMDFRGEPFDPVPKMMAVSEHVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGASSSRTQRL 158
>gi|312794308|ref|YP_004027231.1| thymidine kinase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312181448|gb|ADQ41618.1| Thymidine kinase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 189
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 44/197 (22%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ-KLTAVSAVE 212
V G MFSGKTT+L+ +RR+Q A Y M+ + + D RY +V H + + +AVS
Sbjct: 11 VYTGSMFSGKTTQLLETLRRFQIAGYSTMLFKPSIDTRYSISEVVNHPKNYRFSAVSIEY 70
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + + +++ VIGIDE QF++ I G P KT+
Sbjct: 71 IEDIERYAENVQVIGIDEFQFIKSIFG---------------------PLKTI------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+ K +++A LD FQ F + ++P+A+ V KL A+C+
Sbjct: 103 ---------------NKLLLRDKTIIIAGLDIDFQGRPFESMKEVLPVADYVYKLHAICV 147
Query: 333 SCFRDAAFTKRIGQEKE 349
+C +DA + RI E E
Sbjct: 148 NCGQDAWISHRITDEGE 164
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Query: 21 IRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQ-KLTAVSAVELNKLIPHTKDIDVIGID 79
+RR+Q A Y M+ + + D RY +V H + + +AVS + + + +++ VIGID
Sbjct: 28 LRRFQIAGYSTMLFKPSIDTRYSISEVVNHPKNYRFSAVSIEYIEDIERYAENVQVIGID 87
Query: 80 EGQFFPDVVSFAESMANA---GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
E QF + +++ K +++A LD FQ F + ++P+A+ V KL A+C+
Sbjct: 88 EFQFIKSIFGPLKTINKLLLRDKTIIIAGLDIDFQGRPFESMKEVLPVADYVYKLHAICV 147
Query: 137 SCFRDAAFTKRIGQEKEVIL 156
+C +DA + RI E E I+
Sbjct: 148 NCGQDAWISHRITDEGERIV 167
>gi|386318704|ref|YP_006014867.1| thymidine kinase [Staphylococcus pseudintermedius ED99]
gi|323463875|gb|ADX76028.1| thymidine kinase [Staphylococcus pseudintermedius ED99]
Length = 200
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + DDRY EK+ +H+ ++ A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKPTIDDRYHKEKIVSHNGNEIEAINISK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H +D+IGIDE QF +
Sbjct: 71 ASEIWHHDLNGVDIIGIDEIQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V A+++A G V+ A LD F+ F+ + ++ ++E + KL AVC
Sbjct: 95 ---------RDIVDIAQTLAERGYRVITAGLDMDFKGEPFHPVPEMLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +++
Sbjct: 146 AVCGASSSRTQRLIDGKPAKVD 167
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + DDRY EK+ +H+ ++ A++ + +++ H +D+
Sbjct: 25 LIRRLRRGVYAKQKVVVFKPTIDDRYHKEKIVSHNGNEIEAINISKASEIWHHDLNGVDI 84
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D+V A+++A G V+ A LD F+ F+ + ++ ++E + KL AV
Sbjct: 85 IGIDEIQFFDRDIVDIAQTLAERGYRVITAGLDMDFKGEPFHPVPEMLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGASSSRTQRL 158
>gi|311033346|ref|ZP_07711436.1| thymidine kinase [Bacillus sp. m3-13]
Length = 201
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKDID 74
RR+RR Q+A + + A D+RY E V +H+ + A+ S L+K+ P T +
Sbjct: 27 RRMRRSQFAKQEIQVFKPAIDNRYSDEAVVSHNGTSIIALPVPSSQSILDKVQPET---E 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D +V + +AN G V+VA LD F+ F + L+ +AE V KL A
Sbjct: 84 VIGIDEVQFFDDQIVEVVQELANRGYCVIVAGLDQDFRGEPFGKMPELLAIAETVTKLQA 143
Query: 134 VCMSCFRDAAFTKRI 148
VC C A+ T+R+
Sbjct: 144 VCAVCGSPASRTQRL 158
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 88/197 (44%), Gaps = 54/197 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---- 208
E I G MFSGK+ ELIRR+RR Q+A + + A D+RY E V +H+ + A+
Sbjct: 11 EAICGSMFSGKSEELIRRMRRSQFAKQEIQVFKPAIDNRYSDEAVVSHNGTSIIALPVPS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
S L+K+ P T +VIGIDE QF
Sbjct: 71 SQSILDKVQPET---EVIGIDEVQF----------------------------------- 92
Query: 269 NAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D +V + +AN G V+VA LD F+ F + L+ +AE V KL
Sbjct: 93 -----------FDDQIVEVVQELANRGYCVIVAGLDQDFRGEPFGKMPELLAIAETVTKL 141
Query: 328 TAVCMSCFRDAAFTKRI 344
AVC C A+ T+R+
Sbjct: 142 QAVCAVCGSPASRTQRL 158
>gi|418575558|ref|ZP_13139708.1| thymidine kinase [Staphylococcus saprophyticus subsp. saprophyticus
KACC 16562]
gi|379325960|gb|EHY93088.1| thymidine kinase [Staphylococcus saprophyticus subsp. saprophyticus
KACC 16562]
Length = 183
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY +K+ +H+ + A++ +++ H ++DV
Sbjct: 9 LIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINISTAAEILKHDLSEVDV 68
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF + +V AE +A G V+ A LD F+ F + L+ ++E V KL AV
Sbjct: 69 IGIDEVQFFENGIVHIAEQLAEKGHRVITAGLDMDFRAQPFEPMPQLMAVSEDVTKLQAV 128
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 129 CAVCGASSSRTQRL 142
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 46/187 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGK+ ELIRR+RR YA + ++ + A DDRY +K+ +H+ + A++ +++
Sbjct: 1 MFSGKSEELIRRLRRGLYAKQKVVVFKPAIDDRYHKDKIVSHNGNAIEAINISTAAEILK 60
Query: 219 H-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPP 277
H ++DVIGIDE QF E
Sbjct: 61 HDLSEVDVIGIDEVQFFE------------------------------------------ 78
Query: 278 PEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRD 337
+V AE +A G V+ A LD F+ F + L+ ++E V KL AVC C
Sbjct: 79 ---NGIVHIAEQLAEKGHRVITAGLDMDFRAQPFEPMPQLMAVSEDVTKLQAVCAVCGAS 135
Query: 338 AAFTKRI 344
++ T+R+
Sbjct: 136 SSRTQRL 142
>gi|334337546|ref|YP_004542698.1| thymidine kinase [Isoptericola variabilis 225]
gi|334107914|gb|AEG44804.1| Thymidine kinase [Isoptericola variabilis 225]
Length = 190
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL---TAVS 209
EV+ GPMF+GKT EL+RR+ R + A ++V +A D R +V++H ++ T +
Sbjct: 11 EVVAGPMFAGKTEELVRRVHRARIAGRGVVVVAHALDTRSGPGRVASHSGLEVPSSTVAA 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A E+ +L+ + + +DE QF
Sbjct: 71 ASEIPRLVEFGTRM--VAVDEAQFFG---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
P +V A +A+AG +VVVA L TF F + +L+ +AE V KLTA
Sbjct: 95 -----------PGLVDVAVGLADAGLVVVVAGLSVTFDGRPFEPLPALMAVAESVTKLTA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C RDAA+ R+
Sbjct: 144 VCAVCGRDAAYHVRL 158
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL---TAVSAVELNKLIPHTKDI 73
RR+ R + A ++V +A D R +VA+H ++ T +A E+ +L+ +
Sbjct: 25 LVRRVHRARIAGRGVVVVAHALDTRSGPGRVASHSGLEVPSSTVAAASEIPRLVEFGTRM 84
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+ +DE QFF P +V A +A+AG +VVVA L TF F + +L+ +AE V KLT
Sbjct: 85 --VAVDEAQFFGPGLVDVAVGLADAGLVVVVAGLSVTFDGRPFEPLPALMAVAESVTKLT 142
Query: 133 AVCMSCFRDAAFTKRI 148
AVC C RDAA+ R+
Sbjct: 143 AVCAVCGRDAAYHVRL 158
>gi|403068633|ref|ZP_10909965.1| thymidine kinase [Oceanobacillus sp. Ndiop]
Length = 206
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR YA+ + + A DDRY+ V +H+ A +
Sbjct: 11 EVICGSMFSGKSEELIRRVRRATYAHLSVRVFKPAIDDRYEETAVVSHNGTSTIARPIDK 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++D++GIDE QF + EN
Sbjct: 71 SIEILDHIDSNVDIVGIDEVQFFD--------------------------------EN-- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
VV AE +AN G V+ A LD F+ F + L+ L+E V KL A+C
Sbjct: 97 -----------VVEIAEELANRGIRVIAAGLDTDFRGEPFGPVPKLMSLSESVTKLNAIC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 PVCGSPASRTQRL 158
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR YA+ + + A DDRY+ V +H+ A + +++ H ++D+
Sbjct: 25 LIRRVRRATYAHLSVRVFKPAIDDRYEETAVVSHNGTSTIARPIDKSIEILDHIDSNVDI 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF +VV AE +AN G V+ A LD F+ F + L+ L+E V KL A+
Sbjct: 85 VGIDEVQFFDENVVEIAEELANRGIRVIAAGLDTDFRGEPFGPVPKLMSLSESVTKLNAI 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CPVCGSPASRTQRL 158
>gi|310779346|ref|YP_003967679.1| dethiobiotin synthase [Ilyobacter polytropus DSM 2926]
gi|309748669|gb|ADO83331.1| dethiobiotin synthase [Ilyobacter polytropus DSM 2926]
Length = 410
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 91/196 (46%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ---QKLTAVS 209
EVI G MFSGK+ ELIRR+ R +YA+ + + +++ D RYD V +H + + A S
Sbjct: 13 EVITGGMFSGKSEELIRRLIRSKYASQKVVAFKHSIDKRYDESNVVSHSSIFIEGVPAAS 72
Query: 210 AVELNKLI-PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E+ K+ D +VIGIDE QF
Sbjct: 73 VKEMEKIFYEKYSDAEVIGIDEVQF----------------------------------- 97
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
P VV F E +++ GK V+VA LD F+ F I SL+ AE V+KL+
Sbjct: 98 ---FGEP-------VVEFCEKLSDMGKRVIVAGLDQDFRGEPFEPIDSLLAKAEYVDKLS 147
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A+ T+R+
Sbjct: 148 AICAVCGNPASRTQRL 163
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQ---QKLTAVSAVELNKLI-PHTK 71
RR+ R +YA+ + + +++ D RYD V +H + + A S E+ K+
Sbjct: 26 ELIRRLIRSKYASQKVVAFKHSIDKRYDESNVVSHSSIFIEGVPAASVKEMEKIFYEKYS 85
Query: 72 DIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
D +VIGIDE QFF + VV F E +++ GK V+VA LD F+ F I SL+ AE V+K
Sbjct: 86 DAEVIGIDEVQFFGEPVVEFCEKLSDMGKRVIVAGLDQDFRGEPFEPIDSLLAKAEYVDK 145
Query: 131 LTAVCMSCFRDAAFTKRI 148
L+A+C C A+ T+R+
Sbjct: 146 LSAICAVCGNPASRTQRL 163
>gi|359403153|ref|ZP_09196060.1| Thymidine kinase [Spiroplasma melliferum KC3]
gi|438118389|ref|ZP_20871366.1| thymidine kinase [Spiroplasma melliferum IPMB4A]
gi|357968370|gb|EHJ90879.1| Thymidine kinase [Spiroplasma melliferum KC3]
gi|434155816|gb|ELL44734.1| thymidine kinase [Spiroplasma melliferum IPMB4A]
Length = 194
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-DV 75
F RR+ R YA + + + D+RY +V +H ++ + A+S + ++L+ + K +V
Sbjct: 28 FIRRLVRLSYAKFEIQVFKPTIDNRYSENQVVSHSKKAVEAISVKDSDELLANLKTTTNV 87
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF + +V A+S+A+ G IV+V LD F+ F +I L+ AE V+KL A+
Sbjct: 88 VGIDEVQFFDNNIVKIADSLADKGIIVIVNGLDKDFRGEAFTNIEQLMTRAEEVKKLHAI 147
Query: 135 CMSCFRDAAFTKRI 148
C+ C A T+R+
Sbjct: 148 CVKCGNLANRTQRL 161
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT E IRR+ R YA + + + D+RY +V +H ++ + A+S +
Sbjct: 14 EVITGCMFAGKTEEFIRRLVRLSYAKFEIQVFKPTIDNRYSENQVVSHSKKAVEAISVKD 73
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++L+ + K +V+GIDE QF +
Sbjct: 74 SDELLANLKTTTNVVGIDEVQFFD------------------------------------ 97
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V A+S+A+ G IV+V LD F+ F +I L+ AE V+KL A+C
Sbjct: 98 ---------NNIVKIADSLADKGIIVIVNGLDKDFRGEAFTNIEQLMTRAEEVKKLHAIC 148
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 149 VKCGNLANRTQRL 161
>gi|404404711|ref|ZP_10996295.1| thymidine kinase [Alistipes sp. JC136]
Length = 189
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A+ R I + D RY E+V +HD + +
Sbjct: 13 EVICGSMFSGKTEELIRRLKRAKFAHQRVEIFKPRIDVRYSEEEVVSHDANAIRSTPVES 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T D+DV+GIDE QF + D + VCR
Sbjct: 73 PQNILLMTSDVDVVGIDEAQFFD-----DSIVEVCRR----------------------- 104
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD + F + L+ AE V K+ A+C+
Sbjct: 105 -----------------LANNGVRVIVAGLDMDYTGKPFGPMPHLMATAEYVTKVHAICV 147
Query: 333 SCFRDAAFTKRIGQEKEV 350
C A + R+ ++++
Sbjct: 148 RCGNLAHHSHRLTSDEKL 165
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A+ R I + D RY E+V +HD + + ++ T D+DV+GI
Sbjct: 29 RRLKRAKFAHQRVEIFKPRIDVRYSEEEVVSHDANAIRSTPVESPQNILLMTSDVDVVGI 88
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD + F + L+ AE V K+ A+C+
Sbjct: 89 DEAQFFDDSIVEVCRRLANNGVRVIVAGLDMDYTGKPFGPMPHLMATAEYVTKVHAICVR 148
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A + R+ EK V+LG
Sbjct: 149 CGNLAHHSHRLTSDEKLVVLG 169
>gi|224477107|ref|YP_002634713.1| thymidine kinase [Staphylococcus carnosus subsp. carnosus TM300]
gi|222421714|emb|CAL28528.1| thymidine kinase [Staphylococcus carnosus subsp. carnosus TM300]
Length = 199
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR++R +A + ++ + DDRY EKV +H+ + A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLKRGIFAKQKVVVFKPTIDDRYHKEKVVSHNGNAIEAINIQK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H +DVIGIDE QF E
Sbjct: 71 AEEILEHDLTQVDVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V A+ +A G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------NKIVEIAQDLAEQGHRVIVAGLDMDFKGRPFEPMPQLLAVSELVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 AVCGAPASRTQRL 158
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R +A + ++ + DDRY EKV +H+ + A++ + +++ H +DV
Sbjct: 25 LIRRLKRGIFAKQKVVVFKPTIDDRYHKEKVVSHNGNAIEAINIQKAEEILEHDLTQVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF + +V A+ +A G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFENKIVEIAQDLAEQGHRVIVAGLDMDFKGRPFEPMPQLLAVSELVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CAVCGAPASRTQRL 158
>gi|376316374|emb|CCF99767.1| thymidine kinase [uncultured Flavobacteriia bacterium]
Length = 213
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 55/211 (26%)
Query: 144 FTKRIGQEKE------VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKV 197
F + G +KE VI G MFSGKT ELIRR++R ++AN + I + D+RY T+KV
Sbjct: 2 FLENTGHKKESYGWIEVITGSMFSGKTEELIRRLKRAKFANLKVEIFKPDVDNRYGTDKV 61
Query: 198 STHDQQKL--TAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKA 255
+HD ++ T+VSA +L+ + DV+GIDE QF + D+ + VC +
Sbjct: 62 VSHDSSEIISTSVSAAANIRLL--ADNCDVVGIDEAQFFD-----DEIVRVCND------ 108
Query: 256 PIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDIL 315
+AN G V+VA LD F+ F I
Sbjct: 109 ----------------------------------LANHGIRVIVAGLDMDFKGNPFGPIP 134
Query: 316 SLIPLAECVEKLTAVCMSCFRDAAFTKRIGQ 346
+L+ AE V K+ A+C A + R G+
Sbjct: 135 NLMATAEYVTKVHAICTRTGELAHHSFRKGE 165
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDID 74
RR++R ++AN + I + D+RY T+KV +HD ++ T+VSA +L+ + D
Sbjct: 31 LIRRLKRAKFANLKVEIFKPDVDNRYGTDKVVSHDSSEIISTSVSAAANIRLL--ADNCD 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF D +V +AN G V+VA LD F+ F I +L+ AE V K+ A
Sbjct: 89 VVGIDEAQFFDDEIVRVCNDLANHGIRVIVAGLDMDFKGNPFGPIPNLMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
+C A + R G+ +++
Sbjct: 149 ICTRTGELAHHSFRKGENDSLVM 171
>gi|436833656|ref|YP_007318872.1| Thymidine kinase [Fibrella aestuarina BUZ 2]
gi|384065069|emb|CCG98279.1| Thymidine kinase [Fibrella aestuarina BUZ 2]
Length = 203
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R + A I + + D RYD + +H+ + + +
Sbjct: 20 EVIAGSMFSGKTEELIRRLNRARIAKLNVGIFKPSLDTRYDVNDIVSHNASAIASTPVPQ 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++P + DV+GIDE QF +
Sbjct: 80 AADILPLATECDVVGIDEAQFFD------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
P+VV +A+ GK V+VA LD F F I L+ +AE V K+ A+C+
Sbjct: 103 --------PNVVHVCHQLADQGKRVIVAGLDMDFSGKPFGCIPQLMAIAEFVTKVHAICV 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A ++ R+ +E
Sbjct: 155 VCGDVAHYSYRLVPSQE 171
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R + A I + + D RYD + +H+ + + + ++P + DV+GI
Sbjct: 36 RRLNRARIAKLNVGIFKPSLDTRYDVNDIVSHNASAIASTPVPQAADILPLATECDVVGI 95
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF P+VV +A+ GK V+VA LD F F I L+ +AE V K+ A+C+
Sbjct: 96 DEAQFFDPNVVHVCHQLADQGKRVIVAGLDMDFSGKPFGCIPQLMAIAEFVTKVHAICVV 155
Query: 138 CFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRR 173
C A ++ R+ +E +L G+T R RR
Sbjct: 156 CGDVAHYSYRLVPSQERVL----LGETDSYEARCRR 187
>gi|329961810|ref|ZP_08299824.1| thymidine kinase [Bacteroides fluxus YIT 12057]
gi|328531250|gb|EGF58094.1| thymidine kinase [Bacteroides fluxus YIT 12057]
Length = 201
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSDADVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGVRVIVAGLDMDFRGIPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNDKQV 172
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIFKPAIDTRYSDADVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDVCNQLANNGVRVIVAGLDMDFRGIPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|423305159|ref|ZP_17283158.1| thymidine kinase [Bacteroides uniformis CL03T00C23]
gi|423310981|ref|ZP_17288950.1| thymidine kinase [Bacteroides uniformis CL03T12C37]
gi|392680013|gb|EIY73387.1| thymidine kinase [Bacteroides uniformis CL03T12C37]
gi|392682226|gb|EIY75573.1| thymidine kinase [Bacteroides uniformis CL03T00C23]
Length = 201
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEADVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIVAGLDMDFRGIPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR 343
K+ A+C+ C + A+F+ R
Sbjct: 146 SKVHAICVKCGQLASFSHR 164
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIFKPAIDTRYSEADVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDVCNQLANNGIRVIVAGLDMDFRGIPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|167762105|ref|ZP_02434232.1| hypothetical protein BACSTE_00456 [Bacteroides stercoris ATCC
43183]
gi|167700064|gb|EDS16643.1| thymidine kinase [Bacteroides stercoris ATCC 43183]
Length = 201
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSNI 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----EGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIVAGLDMDFRGNPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNDKQV 172
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIYKPAIDTRYSEADVVSHDSNIISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLIDVCNQLANNGIRVIVAGLDMDFRGNPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|386857550|ref|YP_006261727.1| thymidine kinase [Deinococcus gobiensis I-0]
gi|380001079|gb|AFD26269.1| Thymidine kinase [Deinococcus gobiensis I-0]
Length = 202
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 87/207 (42%), Gaps = 56/207 (27%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI+GPMFSGK+ ELIRR+ R A R + + A DDRY V++H + A+
Sbjct: 8 GGHVEVIVGPMFSGKSEELIRRVTRAVIARQRVAVFKPALDDRYHVSHVASHAGRTAEAL 67
Query: 209 SAVELNKLIPH-----------TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPI 257
+ + + H + +DV+GIDE QF
Sbjct: 68 AVPDAQAIRAHLTGEDVLLAAPVEALDVVGIDEAQFFG---------------------- 105
Query: 258 KRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSL 317
PD+V +A+AG V+VA LD F+ F + L
Sbjct: 106 -----------------------PDLVPLVLDLADAGVRVIVAGLDLDFRAEPFGMMPEL 142
Query: 318 IPLAECVEKLTAVCMSCFRDAAFTKRI 344
+ AE EKLTA+C C A ++R+
Sbjct: 143 LARAESAEKLTAICTVCGAPATRSQRL 169
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 12/144 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH------- 69
RR+ R A R + + A DDRY VA+H + A++ + + H
Sbjct: 26 LIRRVTRAVIARQRVAVFKPALDDRYHVSHVASHAGRTAEALAVPDAQAIRAHLTGEDVL 85
Query: 70 ----TKDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPL 124
+ +DV+GIDE QFF PD+V +A+AG V+VA LD F+ F + L+
Sbjct: 86 LAAPVEALDVVGIDEAQFFGPDLVPLVLDLADAGVRVIVAGLDLDFRAEPFGMMPELLAR 145
Query: 125 AECVEKLTAVCMSCFRDAAFTKRI 148
AE EKLTA+C C A ++R+
Sbjct: 146 AESAEKLTAICTVCGAPATRSQRL 169
>gi|260592636|ref|ZP_05858094.1| thymidine kinase [Prevotella veroralis F0319]
gi|260535406|gb|EEX18023.1| thymidine kinase [Prevotella veroralis F0319]
Length = 200
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A R I + + D RY E V +HDQ + + +
Sbjct: 18 EVICGSMFSGKTEELIRRMRRAQFAKQRVEIFKPSIDTRYSEEDVVSHDQNSIHSTAIDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +AN G V++A LD ++ F + +L +A+ V K+ A+C+
Sbjct: 101 --------EGLVDVCNQLANNGVRVIIAGLDMDYKGVPFGPMPALCAIADDVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYVSHRL 164
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A R I + + D RY E V +HDQ + + + ++ DIDV+GI
Sbjct: 34 RRMRRAQFAKQRVEIFKPSIDTRYSEEDVVSHDQNSIHSTAIDSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V++A LD ++ F + +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLVDVCNQLANNGVRVIIAGLDMDYKGVPFGPMPALCAIADDVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R I ++ V+LG
Sbjct: 154 CGALAYVSHRLIADDRRVMLG 174
>gi|319893070|ref|YP_004149945.1| thymidine kinase [Staphylococcus pseudintermedius HKU10-03]
gi|317162766|gb|ADV06309.1| Thymidine kinase [Staphylococcus pseudintermedius HKU10-03]
Length = 200
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + DDRY EK+ +H+ ++ A++ +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGVYAKQKVVVFKPTIDDRYHKEKIVSHNGNEIEAINISK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H +D+IGIDE QF +
Sbjct: 71 ASEIWRHDLNGVDIIGIDEIQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V A+++A G V+ A LD F+ F+ + ++ ++E + KL AVC
Sbjct: 95 ---------RDIVDIAQTLAERGYRVITAGLDMDFKGEPFHPVPEMLAVSEHITKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +++
Sbjct: 146 AVCGASSSRTQRLIDGKPAKVD 167
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + DDRY EK+ +H+ ++ A++ + +++ H +D+
Sbjct: 25 LIRRLRRGVYAKQKVVVFKPTIDDRYHKEKIVSHNGNEIEAINISKASEIWRHDLNGVDI 84
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF D+V A+++A G V+ A LD F+ F+ + ++ ++E + KL AV
Sbjct: 85 IGIDEIQFFDRDIVDIAQTLAERGYRVITAGLDMDFKGEPFHPVPEMLAVSEHITKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGASSSRTQRL 158
>gi|160889920|ref|ZP_02070923.1| hypothetical protein BACUNI_02353 [Bacteroides uniformis ATCC 8492]
gi|270294582|ref|ZP_06200784.1| thymidine kinase [Bacteroides sp. D20]
gi|156860308|gb|EDO53739.1| thymidine kinase [Bacteroides uniformis ATCC 8492]
gi|270276049|gb|EFA21909.1| thymidine kinase [Bacteroides sp. D20]
Length = 201
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEADVVSHDSHS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 IASTPIDSSASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIVAGLDMDFRGIPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR 343
K+ A+C+ C + A+F+ R
Sbjct: 146 SKVHAICVKCGQLASFSHR 164
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIFKPAIDTRYSEADVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDVCNQLANNGIRVIVAGLDMDFRGIPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|89889689|ref|ZP_01201200.1| thymidine kinase [Flavobacteria bacterium BBFL7]
gi|89517962|gb|EAS20618.1| thymidine kinase [Flavobacteria bacterium BBFL7]
Length = 212
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A+ + I + A D RYD E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAHQKIEIFKPAIDVRYDEENVVSHDSNEIQSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ D DV+GIDE QF + D+ + VC +
Sbjct: 77 AANIPLLAADCDVVGIDEAQFFD-----DEIVTVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
A F+ R ++ V
Sbjct: 152 RTGNLAQFSYRKSSDENV 169
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 95/186 (51%), Gaps = 9/186 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A+ + I + A D RYD E V +HD ++ + + D DV+GI
Sbjct: 33 RRLKRAQFAHQKIEIFKPAIDVRYDEENVVSHDSNEIQSTPVPAAANIPLLAADCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVTVCNDLANRGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKD-DRYDTEK 196
A F+ R ++ V++ G+ E + R Y Y+ M+ KD D D E+
Sbjct: 153 TGNLAQFSYRKSSDENVVM----LGEQQEY-EPLSRGAY--YKAMLAHKVKDFDVQDPEE 205
Query: 197 VSTHDQ 202
++ ++
Sbjct: 206 LAQKNK 211
>gi|50365450|ref|YP_053875.1| thymidine kinase [Mesoplasma florum L1]
gi|60389976|sp|Q6F0I2.1|KITH_MESFL RecName: Full=Thymidine kinase
gi|50364006|gb|AAT75991.1| thymidine, deoxyuridine kinase [Mesoplasma florum L1]
Length = 203
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHT-- 70
F +R+RR+ +A + + D RY +VA+H L ++ S EL + +
Sbjct: 30 EFIKRLRRHAFAKRNVIAFKPVIDTRYAVNEVASHAGTLLPSIPVNSTAELKEKLEAKIL 89
Query: 71 -KDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
K +DV+GIDE QFF + +V + E +A+ G IV+V LD F+ F ++ ++PLAE V
Sbjct: 90 EKKVDVVGIDEIQFFDEAIVDYIEELADRGIIVIVTGLDKDFRSQPFKNVDRILPLAEMV 149
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
+KLTA+C C A T+RI
Sbjct: 150 DKLTAICQKCGNFANRTQRI 169
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 52/211 (24%)
Query: 140 RDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVST 199
RD K++G E+I G MF+GKT E I+R+RR+ +A + + D RY +V++
Sbjct: 5 RDTIEQKQLGW-VELITGCMFAGKTEEFIKRLRRHAFAKRNVIAFKPVIDTRYAVNEVAS 63
Query: 200 HDQQKLTAV---SAVELNKLIPHT---KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQ 253
H L ++ S EL + + K +DV+GIDE QF +
Sbjct: 64 HAGTLLPSIPVNSTAELKEKLEAKILEKKVDVVGIDEIQFFD------------------ 105
Query: 254 KAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFND 313
+V + E +A+ G IV+V LD F+ F +
Sbjct: 106 ---------------------------EAIVDYIEELADRGIIVIVTGLDKDFRSQPFKN 138
Query: 314 ILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
+ ++PLAE V+KLTA+C C A T+RI
Sbjct: 139 VDRILPLAEMVDKLTAICQKCGNFANRTQRI 169
>gi|392390129|ref|YP_006426732.1| thymidine kinase [Ornithobacterium rhinotracheale DSM 15997]
gi|390521207|gb|AFL96938.1| thymidine kinase [Ornithobacterium rhinotracheale DSM 15997]
Length = 196
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R + A + I + A D RYD + V +HD+ K A
Sbjct: 17 EVICGSMFSGKTEELIRRVKRAELAGQKVEIFKPAIDKRYDEQDVVSHDENKKQATPIEA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ L D DV+GIDE QF +
Sbjct: 77 SSNLPILASDCDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN+GK +++A LD F+ F + +L+ +AE V K+ A+C+
Sbjct: 100 --------EGIVEVANLLANSGKRIIIAGLDMDFKGRPFGPMPNLMAVAEYVTKVHAICV 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 KTGNLANYSHR 162
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR++R + A + I + A D RYD + V +HD+ K A + L D DV+
Sbjct: 31 LIRRVKRAELAGQKVEIFKPAIDKRYDEQDVVSHDENKKQATPIEASSNLPILASDCDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +V A +AN+GK +++A LD F+ F + +L+ +AE V K+ A+C
Sbjct: 91 GIDEAQFFDEGIVEVANLLANSGKRIIIAGLDMDFKGRPFGPMPNLMAVAEYVTKVHAIC 150
Query: 136 MSCFRDAAFTKR-IGQEKEVILG 157
+ A ++ R I +K V LG
Sbjct: 151 VKTGNLANYSHRKIKSDKLVELG 173
>gi|372208859|ref|ZP_09496661.1| thymidine kinase [Flavobacteriaceae bacterium S85]
Length = 196
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDID 74
RR++R Q A R I + A D RYD E V +HD+ + T V A +L+ + D+D
Sbjct: 30 LIRRLKRAQIAQQRIEIFKPAIDTRYDEEDVVSHDKNNIRSTPVPAAANIRLLAN--DVD 87
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ A
Sbjct: 88 VVGIDEAQFFDDEIVNVCNDLANKGIRVIVAGLDMDFKGQPFGPMPNLMATAEYVTKVHA 147
Query: 134 VCMSCFRDAAFTKRIGQE-KEVILG 157
+C A ++ R E K+V+LG
Sbjct: 148 ICAKTGSLAHYSHRKSTEDKQVMLG 172
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 90/197 (45%), Gaps = 49/197 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q A R I + A D RYD E V +HD+ + T V A
Sbjct: 16 EVICGSMFSGKTEELIRRLKRAQIAQQRIEIFKPAIDTRYDEEDVVSHDKNNIRSTPVPA 75
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ + D+DV+GIDE QF + D+ + VC +
Sbjct: 76 AANIRLLAN--DVDVVGIDEAQFFD-----DEIVNVCND--------------------- 107
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ A+
Sbjct: 108 -------------------LANKGIRVIVAGLDMDFKGQPFGPMPNLMATAEYVTKVHAI 148
Query: 331 CMSCFRDAAFTKRIGQE 347
C A ++ R E
Sbjct: 149 CAKTGSLAHYSHRKSTE 165
>gi|404486485|ref|ZP_11021675.1| thymidine kinase [Barnesiella intestinihominis YIT 11860]
gi|404336303|gb|EJZ62764.1| thymidine kinase [Barnesiella intestinihominis YIT 11860]
Length = 200
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R + A R I + A D RY E + +HD + +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKIARQRVEIFKPAIDVRYSEENIVSHDSTSILSTPVDN 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ +DV+GIDE QF + + + VC E
Sbjct: 77 SHSILLMASGVDVVGIDEAQFFD-----EGIVEVCSE----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+R F + SL+ +A+ V K+ A+C+
Sbjct: 109 -----------------LANNGTRVIVAGLDMDFRRVPFGPMPSLLSIADDVYKVHAICV 151
Query: 333 SCFRDAAFTKRI 344
C A ++ R+
Sbjct: 152 KCGHLANYSYRL 163
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R + A R I + A D RY E + +HD + + + ++ +DV+GI
Sbjct: 33 RRLKRAKIARQRVEIFKPAIDVRYSEENIVSHDSTSILSTPVDNSHSILLMASGVDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +AN G V+VA LD F+R F + SL+ +A+ V K+ A+C+
Sbjct: 93 DEAQFFDEGIVEVCSELANNGTRVIVAGLDMDFRRVPFGPMPSLLSIADDVYKVHAICVK 152
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A ++ R + +K V+LG
Sbjct: 153 CGHLANYSYRLVDNDKRVLLG 173
>gi|320450508|ref|YP_004202604.1| thymidine kinase [Thermus scotoductus SA-01]
gi|320150677|gb|ADW22055.1| thymidine kinase [Thermus scotoductus SA-01]
Length = 235
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+ ELIRR++R A R ++ + D RY +V +HD Q++ A+ E
Sbjct: 55 EVITGPMFSGKSEELIRRVKRALIARQRVLVFKPRLDTRYHESQVVSHDGQRVEAIPVGE 114
Query: 213 LNKLIPHTKDI-DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + + V+ +DE QF++
Sbjct: 115 AREIEAYLSPLPQVVAVDEVQFLDA----------------------------------- 139
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++S AE +A G V++A LD F+ F + L+ AE VEKLTA+C
Sbjct: 140 ----------GLLSLAEDLARQGVRVILAGLDLDFRGEPFGLMPELLARAEFVEKLTAIC 189
Query: 332 MSCFRDAAFTKRIGQEKEVR 351
C A T+R+ K R
Sbjct: 190 AQCGAPATRTQRLVNGKPAR 209
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-DV 75
RR++R A R ++ + D RY +V +HD Q++ A+ E ++ + + V
Sbjct: 69 LIRRVKRALIARQRVLVFKPRLDTRYHESQVVSHDGQRVEAIPVGEAREIEAYLSPLPQV 128
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ +DE QF ++S AE +A G V++A LD F+ F + L+ AE VEKLTA+
Sbjct: 129 VAVDEVQFLDAGLLSLAEDLARQGVRVILAGLDLDFRGEPFGLMPELLARAEFVEKLTAI 188
Query: 135 CMSCFRDAAFTKRI 148
C C A T+R+
Sbjct: 189 CAQCGAPATRTQRL 202
>gi|317481221|ref|ZP_07940292.1| thymidine kinase [Bacteroides sp. 4_1_36]
gi|316902554|gb|EFV24437.1| thymidine kinase [Bacteroides sp. 4_1_36]
Length = 213
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
TKR G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 24 TKRRGR-IEVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSEADVVSHDSHS 82
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ + ++ T +IDV+GIDE QF + + VC +
Sbjct: 83 IASTPIDSSASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ--------------- 122
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V+VA LD F+ F + L +A+ V
Sbjct: 123 -------------------------LANNGIRVIVAGLDMDFRGIPFGPMPGLCAIADEV 157
Query: 325 EKLTAVCMSCFRDAAFTKR 343
K+ A+C+ C + A+F+ R
Sbjct: 158 SKVHAICVKCGQLASFSHR 176
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD + + ++ T +IDV+GI
Sbjct: 47 RRLKRAKFAKQRVEIFKPAIDTRYSEADVVSHDSHSIASTPIDSSASILLFTSEIDVVGI 106
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 107 DEAQFFDSGLIDVCNQLANNGIRVIVAGLDMDFRGIPFGPMPGLCAIADEVSKVHAICVK 166
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 167 CGQLASFSHRTVKNDKQVLLG 187
>gi|307105769|gb|EFN54017.1| hypothetical protein CHLNCDRAFT_25389 [Chlorella variabilis]
Length = 230
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 80/187 (42%), Gaps = 51/187 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+++GPMF+GKTTEL+RR+ RY+ A +V+ KDDRY V TH+ K +
Sbjct: 32 EIVVGPMFAGKTTELLRRVARYEAAGLSVAVVKSNKDDRYCAAHVVTHNGLKRPCFATPS 91
Query: 213 LNKLIPHTKD----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
L VI +DE QF
Sbjct: 92 LAAFKEAAGAAYDAFQVIAVDEAQF----------------------------------- 116
Query: 269 NAALNVPPPPEFPDVVSF-AESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
FPD+ F A + + K +++A LDG FQR F +L L+P+A+ V KL
Sbjct: 117 -----------FPDLKEFCAHAADHEHKRLLLAGLDGDFQRQRFGQVLDLLPMADSVTKL 165
Query: 328 TAVCMSC 334
TA C C
Sbjct: 166 TAHCKFC 172
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD----ID 74
RR+ RY+ A +V+ KDDRY V TH+ K + L
Sbjct: 48 RRVARYEAAGLSVAVVKSNKDDRYCAAHVVTHNGLKRPCFATPSLAAFKEAAGAAYDAFQ 107
Query: 75 VIGIDEGQFFPDVVSF-AESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VI +DE QFFPD+ F A + + K +++A LDG FQR F +L L+P+A+ V KLTA
Sbjct: 108 VIAVDEAQFFPDLKEFCAHAADHEHKRLLLAGLDGDFQRQRFGQVLDLLPMADSVTKLTA 167
Query: 134 VCMSCFR---DAAFTKRIGQE--KEVILG 157
C C + A F+ RI + +EV+ G
Sbjct: 168 HCKFCDQRRVAAVFSLRITADSRQEVVGG 196
>gi|374374320|ref|ZP_09631979.1| Thymidine kinase [Niabella soli DSM 19437]
gi|373233762|gb|EHP53556.1| Thymidine kinase [Niabella soli DSM 19437]
Length = 189
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+AN + I + A D RYD E + +HD + +
Sbjct: 16 EVICGSMFSGKTEELIRRLKRVQFANLKAEIFKPAIDTRYDEENIVSHDTSIIHSTPVDN 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
K++ + DVIGIDE QF +
Sbjct: 76 SQKILLLAQGADVIGIDEAQFFD------------------------------------- 98
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
PE P V + +A G V+VA LD + F + ++ A+ + KL A+C+
Sbjct: 99 -----PELPGV---CDQLAYQGIRVIVAGLDMDYTGKPFGPMPEILARADYITKLHAICV 150
Query: 333 SCFRDAAFT-KRIGQEKEVRI 352
C A ++ ++I E++V +
Sbjct: 151 KCGNIANYSYRKIPDEEQVML 171
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+AN + I + A D RYD E + +HD + + K++ + DVIGI
Sbjct: 32 RRLKRVQFANLKAEIFKPAIDTRYDEENIVSHDTSIIHSTPVDNSQKILLLAQGADVIGI 91
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF P++ + +A G V+VA LD + F + ++ A+ + KL A+C+
Sbjct: 92 DEAQFFDPELPGVCDQLAYQGIRVIVAGLDMDYTGKPFGPMPEILARADYITKLHAICVK 151
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
C A ++ ++I E++V+LG
Sbjct: 152 CGNIANYSYRKIPDEEQVMLG 172
>gi|383812167|ref|ZP_09967609.1| thymidine kinase [Prevotella sp. oral taxon 306 str. F0472]
gi|383355166|gb|EID32708.1| thymidine kinase [Prevotella sp. oral taxon 306 str. F0472]
Length = 200
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A R I + + D RY E V +HDQ + + +
Sbjct: 18 EVICGSMFSGKTEELIRRMRRAQFAKQRVEIFKPSIDTRYSEEDVVSHDQNSIHSTAIDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +AN G V++A LD ++ F + +L +A+ V K+ A+C+
Sbjct: 101 --------EGLVDVCNQLANNGIRVIIAGLDMDYKGVPFGPMPALCAIADDVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYVSHRL 164
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A R I + + D RY E V +HDQ + + + ++ DIDV+GI
Sbjct: 34 RRMRRAQFAKQRVEIFKPSIDTRYSEEDVVSHDQNSIHSTAIDSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V++A LD ++ F + +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLVDVCNQLANNGIRVIIAGLDMDYKGVPFGPMPALCAIADDVTKVHAICVK 153
Query: 138 CFRDAAFTKRIGQE-KEVILG 157
C A + R+ + + V+LG
Sbjct: 154 CGALAYVSHRLTADTRRVMLG 174
>gi|418323325|ref|ZP_12934606.1| thymidine kinase [Staphylococcus pettenkoferi VCU012]
gi|365229972|gb|EHM71096.1| thymidine kinase [Staphylococcus pettenkoferi VCU012]
Length = 201
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR+RR YA + ++ + A DDRY +K+ +H+ + A +
Sbjct: 11 ECITGSMFSGKSEELIRRLRRGLYAKQKVIVFKPAIDDRYYKDKIVSHNGNAIEAFNITT 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + D+DVIGIDE QF +
Sbjct: 71 AAEILKYDLSDVDVIGIDEVQFFDA----------------------------------- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V AE +A+ G VV A LD F+ F + +++ ++E + KL AVC
Sbjct: 96 ----------EIVHIAEQLADQGHRVVTAGLDMDFRGQPFEPMPAMLAVSEIIIKLQAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C ++ T+R+ K +++
Sbjct: 146 AVCGSSSSRTQRLIDGKPAKVD 167
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR YA + ++ + A DDRY +K+ +H+ + A + +++ + D+DV
Sbjct: 25 LIRRLRRGLYAKQKVIVFKPAIDDRYYKDKIVSHNGNAIEAFNITTAAEILKYDLSDVDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF ++V AE +A+ G VV A LD F+ F + +++ ++E + KL AV
Sbjct: 85 IGIDEVQFFDAEIVHIAEQLADQGHRVVTAGLDMDFRGQPFEPMPAMLAVSEIIIKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158
>gi|284040003|ref|YP_003389933.1| thymidine kinase [Spirosoma linguale DSM 74]
gi|283819296|gb|ADB41134.1| Thymidine kinase [Spirosoma linguale DSM 74]
Length = 209
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 85/197 (43%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R Q A IV+ A D RY E + +H +++V
Sbjct: 20 EVICGSMFSGKTEELIRRLTRAQIAKLNVKIVKPALDTRYHDENIVSHSSITISSVPVQT 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ + DV+GIDE QF +
Sbjct: 80 AGQILALAGNCDVVGIDEAQFFD------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D+ + +AN GK V+VA LD F F + L+ +AE V K+ A+C+
Sbjct: 103 --------QDITNVCTQLANQGKRVIVAGLDMDFAGKPFGCMPQLLSIAEYVTKVHAICV 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A ++ R+ KE
Sbjct: 155 VCGDIAQYSYRLVPSKE 171
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R Q A IV+ A D RY E + +H +++V +++ + DV+GI
Sbjct: 36 RRLTRAQIAKLNVKIVKPALDTRYHDENIVSHSSITISSVPVQTAGQILALAGNCDVVGI 95
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D+ + +AN GK V+VA LD F F + L+ +AE V K+ A+C+
Sbjct: 96 DEAQFFDQDITNVCTQLANQGKRVIVAGLDMDFAGKPFGCMPQLLSIAEYVTKVHAICVV 155
Query: 138 CFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRR 173
C A ++ R+ KE +L G+T R RR
Sbjct: 156 CGDIAQYSYRLVPSKERVL----LGETDSYEARCRR 187
>gi|389816679|ref|ZP_10207631.1| thymidine kinase [Planococcus antarcticus DSM 14505]
gi|388465052|gb|EIM07374.1| thymidine kinase [Planococcus antarcticus DSM 14505]
Length = 198
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
E+I G MFSGK+ ELIRR+RR Q+A + + + DDRY E+V +H+ + A+
Sbjct: 11 ELICGSMFSGKSEELIRRVRRSQFAKQKIAVFKPKIDDRYSKEEVVSHNGATVIALPISC 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ E+ + I T + DVI IDE QF +
Sbjct: 71 STEMWEYI--TDEFDVIAIDEAQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ + +AN G V+VA LD F+ F + +L+ +AE V KL A
Sbjct: 95 -----------EDIIENVQKLANHGFRVIVAGLDQDFRGRPFGPMPALLAIAEQVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDIDV 75
RR+RR Q+A + + + DDRY E+V +H+ + A+ + E+ + I T + DV
Sbjct: 27 RRVRRSQFAKQKIAVFKPKIDDRYSKEEVVSHNGATVIALPISCSTEMWEYI--TDEFDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF D++ + +AN G V+VA LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAIDEAQFFDEDIIENVQKLANHGFRVIVAGLDQDFRGRPFGPMPALLAIAEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|425733747|ref|ZP_18852067.1| thymidine kinase [Brevibacterium casei S18]
gi|425482187|gb|EKU49344.1| thymidine kinase [Brevibacterium casei S18]
Length = 198
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 86/194 (44%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+ EL+RR+RR + A +++ ++ D R + V++H + AV +
Sbjct: 12 EVITGPMFSGKSEELMRRVRRARIAGVEALVISHSLDTRAELSAVTSHIGVTVPAVPVGD 71
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ L +D+D++ IDE QF
Sbjct: 72 VASLAEAARAEDVDLVAIDEAQFFG----------------------------------- 96
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
PD+V E + + G V+V L TF F + + + LAE V KLTAV
Sbjct: 97 ----------PDLVPAVEKLLSRGIDVIVEGLCVTFDGDPFEPLPTFMALAEDVTKLTAV 146
Query: 331 CMSCFRDAAFTKRI 344
C C RDA F +RI
Sbjct: 147 CTVCGRDAVFHERI 160
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLI--PHTKDIDVI 76
RR+RR + A +++ ++ D R + V +H + AV ++ L +D+D++
Sbjct: 28 RRVRRARIAGVEALVISHSLDTRAELSAVTSHIGVTVPAVPVGDVASLAEAARAEDVDLV 87
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IDE QFF PD+V E + + G V+V L TF F + + + LAE V KLTAVC
Sbjct: 88 AIDEAQFFGPDLVPAVEKLLSRGIDVIVEGLCVTFDGDPFEPLPTFMALAEDVTKLTAVC 147
Query: 136 MSCFRDAAFTKRI 148
C RDA F +RI
Sbjct: 148 TVCGRDAVFHERI 160
>gi|224541465|ref|ZP_03682004.1| hypothetical protein CATMIT_00634 [Catenibacterium mitsuokai DSM
15897]
gi|224525623|gb|EEF94728.1| thymidine kinase, partial [Catenibacterium mitsuokai DSM 15897]
Length = 208
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI YA ++ + DDRY T ++++H K+ + E
Sbjct: 11 EVICGCMFAGKTEELIRRINVLSYARKNILVFKPKIDDRYSTTEIASHAGSKVPCIVISE 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H D DV+ IDE QF +
Sbjct: 71 AKEILDHVNYDTDVVAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
DVV E +A++G V+VA LD F+ F + L+ AE V KLTAVC
Sbjct: 95 ---------EDVVDICEYLADSGLRVMVAGLDKDFRGEPFGVLPDLLTRAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A T+RI
Sbjct: 146 AKCGAPATRTQRI 158
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI YA ++ + DDRY T ++A+H K+ + E +++ H D DV+
Sbjct: 27 RRINVLSYARKNILVFKPKIDDRYSTTEIASHAGSKVPCIVISEAKEILDHVNYDTDVVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF DVV E +A++G V+VA LD F+ F + L+ AE V KLTAVC
Sbjct: 87 IDEVQFFDEDVVDICEYLADSGLRVMVAGLDKDFRGEPFGVLPDLLTRAEFVTKLTAVCA 146
Query: 137 SCFRDAAFTKRI 148
C A T+RI
Sbjct: 147 KCGAPATRTQRI 158
>gi|198276101|ref|ZP_03208632.1| hypothetical protein BACPLE_02289 [Bacteroides plebeius DSM 17135]
gi|198270913|gb|EDY95183.1| thymidine kinase [Bacteroides plebeius DSM 17135]
Length = 202
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 85/191 (44%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR +A+ R I + + D RY E+V +HD + +
Sbjct: 23 EVICGSMFSGKTEELIRRLRRATFAHQRVEIFKPSIDTRYSEEEVVSHDNNSIKSTPIDS 82
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T +IDV+GIDE QF + D VC E
Sbjct: 83 SASILLFTSEIDVVGIDEAQFFD-----DGLPEVCNE----------------------- 114
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 115 -----------------LANRGVRVIIAGLDMDFKGVPFGPIPALCAIADEVTKVHAICV 157
Query: 333 SCFRDAAFTKR 343
C A + R
Sbjct: 158 KCGNLAYVSHR 168
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR +A+ R I + + D RY E+V +HD + + ++ T +IDV+GI
Sbjct: 39 RRLRRATFAHQRVEIFKPSIDTRYSEEEVVSHDNNSIKSTPIDSSASILLFTSEIDVVGI 98
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D + +AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 99 DEAQFFDDGLPEVCNELANRGVRVIIAGLDMDFKGVPFGPIPALCAIADEVTKVHAICVK 158
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + +K V+LG
Sbjct: 159 CGNLAYVSHRTVLNDKRVLLG 179
>gi|297585443|ref|YP_003701223.1| Thymidine kinase [Bacillus selenitireducens MLS10]
gi|297143900|gb|ADI00658.1| Thymidine kinase [Bacillus selenitireducens MLS10]
Length = 209
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK+ ELIRR+RR Y + + + A D+RY E+V +H K+TAV +
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAHYGRQKVQVFKPAIDNRYSDEEVVSHSGNKVTAVPVGA 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ ++ +LI H+ V+ DE QF +
Sbjct: 71 SEDVIELI-HSS-TQVVAFDEVQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+V+ AE +A+ G V+VA LD F+ F + L+ +AE V KL A
Sbjct: 95 -----------EHIVALAEKLADDGIRVIVAGLDQDFRGEPFGVVPQLMSMAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
+C+SC A+ T+R+
Sbjct: 144 ICLSCGSPASRTQRL 158
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Y + + + A D+RY E+V +H K+TAV ++ ++ +LI H+ V
Sbjct: 27 RRVRRAHYGRQKVQVFKPAIDNRYSDEEVVSHSGNKVTAVPVGASEDVIELI-HSS-TQV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ DE QFF + +V+ AE +A+ G V+VA LD F+ F + L+ +AE V KL A+
Sbjct: 85 VAFDEVQFFDEHIVALAEKLADDGIRVIVAGLDQDFRGEPFGVVPQLMSMAESVTKLQAI 144
Query: 135 CMSCFRDAAFTKRI 148
C+SC A+ T+R+
Sbjct: 145 CLSCGSPASRTQRL 158
>gi|167753962|ref|ZP_02426089.1| hypothetical protein ALIPUT_02247 [Alistipes putredinis DSM 17216]
gi|167658587|gb|EDS02717.1| thymidine kinase [Alistipes putredinis DSM 17216]
Length = 191
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + D RY E+V +HD + +
Sbjct: 13 EVICGSMFSGKTEELIRRLKRAEFARLRVEIFKPRIDVRYSEEEVVSHDASAIRSTPVDS 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T D+DV+GIDE QF + + VCR+
Sbjct: 73 AQNILLMTSDVDVVGIDEAQFFD-----QGLVEVCRQ----------------------- 104
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A++G V+VA LD F F + +L+ AE V K+ A+C+
Sbjct: 105 -----------------LADSGVRVIVAGLDMDFTGKPFGPMPALMATAEYVTKVHAICV 147
Query: 333 SCFRDAAFTKRI-GQEKEVRI 352
C A + R+ EK+V +
Sbjct: 148 RCGNLAHHSHRLTNDEKQVML 168
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + D RY E+V +HD + + ++ T D+DV+GI
Sbjct: 29 RRLKRAEFARLRVEIFKPRIDVRYSEEEVVSHDASAIRSTPVDSAQNILLMTSDVDVVGI 88
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V +A++G V+VA LD F F + +L+ AE V K+ A+C+
Sbjct: 89 DEAQFFDQGLVEVCRQLADSGVRVIVAGLDMDFTGKPFGPMPALMATAEYVTKVHAICVR 148
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A + R+ EK+V+LG
Sbjct: 149 CGNLAHHSHRLTNDEKQVMLG 169
>gi|34540682|ref|NP_905161.1| thymidine kinase [Porphyromonas gingivalis W83]
gi|334146648|ref|YP_004509576.1| thymidine kinase [Porphyromonas gingivalis TDC60]
gi|419971532|ref|ZP_14486972.1| thymidine kinase [Porphyromonas gingivalis W50]
gi|60390062|sp|Q7MVV7.1|KITH_PORGI RecName: Full=Thymidine kinase
gi|34396996|gb|AAQ66060.1| thymidine kinase [Porphyromonas gingivalis W83]
gi|333803803|dbj|BAK25010.1| thymidine kinase [Porphyromonas gingivalis TDC60]
gi|392608191|gb|EIW91049.1| thymidine kinase [Porphyromonas gingivalis W50]
Length = 204
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR + A I + D RYD V +HD+ + + ++ + +DV+GI
Sbjct: 35 RRLRRAKIARQTVEIFKPTIDIRYDETDVVSHDKNAIASTPVDNSANILLLSSQVDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V A+ +A+ G VV+A LD F+R F + L +A+ V K+ AVC+
Sbjct: 95 DEAQFFDEGLVEVAQQLADQGVRVVIAGLDMDFRRQPFGPMPGLCAIADSVTKVHAVCVE 154
Query: 138 CFRDAAFT-KRIGQEKEVILGPM 159
C R A+++ +R+ +++V+LG +
Sbjct: 155 CGRLASYSFRRVQGDQQVMLGEL 177
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR + A I + D RYD V +HD+ + +
Sbjct: 19 EVICGSMFSGKTEELLRRLRRAKIARQTVEIFKPTIDIRYDETDVVSHDKNAIASTPVDN 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + +DV+GIDE QF +
Sbjct: 79 SANILLLSSQVDVVGIDEAQFFD------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A+ +A+ G VV+A LD F+R F + L +A+ V K+ AVC+
Sbjct: 102 --------EGLVEVAQQLADQGVRVVIAGLDMDFRRQPFGPMPGLCAIADSVTKVHAVCV 153
Query: 333 SCFRDAAFT-KRIGQEKEVRI 352
C R A+++ +R+ +++V +
Sbjct: 154 ECGRLASYSFRRVQGDQQVML 174
>gi|390959123|ref|YP_006422880.1| thymidine kinase [Terriglobus roseus DSM 18391]
gi|390414041|gb|AFL89545.1| thymidine kinase [Terriglobus roseus DSM 18391]
Length = 215
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 52/205 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---- 208
EVI GPMFSGK+ ELIRR++R + A R + D RY +++H +Q A
Sbjct: 20 EVITGPMFSGKSEELIRRLKRARIARQRVSCFKPDIDLRYHRTAIASHSEQTHEAAVVTP 79
Query: 209 SAVELNKLIPHTKDID---VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+A L + + T+ +D VIG+DE QF
Sbjct: 80 NAERLREELFATRLVDRVEVIGLDEVQFF------------------------------- 108
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
+NA ++ A + + GK V++A LD TF F + +L+ LA+ V
Sbjct: 109 --DNA------------ILPLAMELVSMGKRVILAGLDTTFANEPFGPVPALMALADKVT 154
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEV 350
KL AVCM+C + A T+R+G +E+
Sbjct: 155 KLNAVCMTCGQPAIHTQRLGHSQEL 179
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR++R + A R + D RY +A+H +Q A +A L + + T+
Sbjct: 34 LIRRLKRARIARQRVSCFKPDIDLRYHRTAIASHSEQTHEAAVVTPNAERLREELFATRL 93
Query: 73 ID---VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+D VIG+DE QFF + ++ A + + GK V++A LD TF F + +L+ LA+ V
Sbjct: 94 VDRVEVIGLDEVQFFDNAILPLAMELVSMGKRVILAGLDTTFANEPFGPVPALMALADKV 153
Query: 129 EKLTAVCMSCFRDAAFTKRIGQEKEVIL 156
KL AVCM+C + A T+R+G +E+++
Sbjct: 154 TKLNAVCMTCGQPAIHTQRLGHSQELVV 181
>gi|294674536|ref|YP_003575152.1| thymidine kinase [Prevotella ruminicola 23]
gi|294472499|gb|ADE81888.1| thymidine kinase [Prevotella ruminicola 23]
Length = 200
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR+RR Q+A + I + A D RY E V +HDQ+ + +
Sbjct: 16 EVVCGSMFSGKTEELIRRMRRAQFARQKVEIFKPAIDVRYSEEDVVSHDQKHIQSTPIDS 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + DIDV+GIDE QF ++
Sbjct: 76 PGSILLLSSDIDVVGIDEAQFFDM------------------------------------ 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +AN G V+VA LD ++ F + +L +A+ V K+ A+C+
Sbjct: 100 ---------GIVDVCNELANRGVRVIVAGLDMDYKGVPFGPMPALCAIADDVTKVHAICV 150
Query: 333 SCFRDAAFTKRIGQEKE 349
C A + R Q ++
Sbjct: 151 KCGNLAYVSHRKVQSEQ 167
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + A D RY E V +HDQ+ + + ++ + DIDV+GI
Sbjct: 32 RRMRRAQFARQKVEIFKPAIDVRYSEEDVVSHDQKHIQSTPIDSPGSILLLSSDIDVVGI 91
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V +AN G V+VA LD ++ F + +L +A+ V K+ A+C+
Sbjct: 92 DEAQFFDMGIVDVCNELANRGVRVIVAGLDMDYKGVPFGPMPALCAIADDVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + E+ V+LG
Sbjct: 152 CGNLAYVSHRKVQSEQRVLLG 172
>gi|188994886|ref|YP_001929138.1| thymidine kinase [Porphyromonas gingivalis ATCC 33277]
gi|238691479|sp|B2RJJ6.1|KITH_PORG3 RecName: Full=Thymidine kinase
gi|188594566|dbj|BAG33541.1| putative thymidine kinase [Porphyromonas gingivalis ATCC 33277]
Length = 204
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR + A I + D RYD V +HD+ + + ++ + +DV+GI
Sbjct: 35 RRLRRAKIARQTVEIFKPTIDIRYDETDVVSHDKNAIASAPVDNSANILLLSSQVDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V A+ +A+ G VV+A LD F+R F + L +A+ V K+ AVC+
Sbjct: 95 DEAQFFDEGLVEVAQQLADQGVRVVIAGLDMDFRRQPFGPMPGLCAIADSVTKVHAVCVE 154
Query: 138 CFRDAAFT-KRIGQEKEVILGPM 159
C R A+++ +R+ +++V+LG +
Sbjct: 155 CGRLASYSFRRVQGDQQVMLGEL 177
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR + A I + D RYD V +HD+ + +
Sbjct: 19 EVICGSMFSGKTEELLRRLRRAKIARQTVEIFKPTIDIRYDETDVVSHDKNAIASAPVDN 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + +DV+GIDE QF +
Sbjct: 79 SANILLLSSQVDVVGIDEAQFFD------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A+ +A+ G VV+A LD F+R F + L +A+ V K+ AVC+
Sbjct: 102 --------EGLVEVAQQLADQGVRVVIAGLDMDFRRQPFGPMPGLCAIADSVTKVHAVCV 153
Query: 333 SCFRDAAFT-KRIGQEKEVRI 352
C R A+++ +R+ +++V +
Sbjct: 154 ECGRLASYSFRRVQGDQQVML 174
>gi|239828608|ref|YP_002951232.1| thymidine kinase [Geobacillus sp. WCH70]
gi|259494453|sp|C5D9N8.1|KITH_GEOSW RecName: Full=Thymidine kinase
gi|239808901|gb|ACS25966.1| Thymidine kinase [Geobacillus sp. WCH70]
Length = 205
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR +A + + D+RY E V +H+ L A+
Sbjct: 11 EVICGSMFSGKSEELIRRVRRATFAKQEVKVFKPTIDNRYSDEAVVSHNGNSLIAIPVSS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI IDE QF SD
Sbjct: 71 PKEIFEHISEKTDVIAIDEVQFF-----SD------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ +++A+ G V+VA LD F+ F + +L+ +AE V KL AVC
Sbjct: 96 ----------DIIDVVQTLADRGYRVIVAGLDQDFRGEPFGPVPTLMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 TVCGSPASRTQRL 158
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR +A + + D+RY E V +H+ L A+ ++ H ++ DV
Sbjct: 25 LIRRVRRATFAKQEVKVFKPTIDNRYSDEAVVSHNGNSLIAIPVSSPKEIFEHISEKTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF D ++ +++A+ G V+VA LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAIDEVQFFSDDIIDVVQTLADRGYRVIVAGLDQDFRGEPFGPVPTLMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|399022629|ref|ZP_10724701.1| thymidine kinase [Chryseobacterium sp. CF314]
gi|398084465|gb|EJL75150.1| thymidine kinase [Chryseobacterium sp. CF314]
Length = 196
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 84/194 (43%), Gaps = 45/194 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A I + D RY E V +H+Q K+ + +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAEMAGQNVEIFKPKLDTRYSDEDVVSHNQNKIRSTAVEN 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
N+++ + DV+GIDE QF +
Sbjct: 77 PNEILLLASNCDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN+G VVVA LD F F + +L+ AE V K+ A+C
Sbjct: 100 --------ESIVEIANQLANSGIRVVVAGLDMDFLGRPFGPMPNLMATAEYVTKVHAICK 151
Query: 333 SCFRDAAFTKRIGQ 346
A ++ RI Q
Sbjct: 152 RTGNLANYSMRITQ 165
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR+RR + A I + D RY E V +H+Q K+ + + N+++ + DV+
Sbjct: 31 LIRRLRRAEMAGQNVEIFKPKLDTRYSDEDVVSHNQNKIRSTAVENPNEILLLASNCDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +V A +AN+G VVVA LD F F + +L+ AE V K+ A+C
Sbjct: 91 GIDEAQFFDESIVEIANQLANSGIRVVVAGLDMDFLGRPFGPMPNLMATAEYVTKVHAIC 150
Query: 136 MSCFRDAAFTKRIGQEKEVI 155
A ++ RI Q ++
Sbjct: 151 KRTGNLANYSMRITQGNNLV 170
>gi|53711949|ref|YP_097941.1| thymidine kinase [Bacteroides fragilis YCH46]
gi|265765291|ref|ZP_06093566.1| thymidine kinase [Bacteroides sp. 2_1_16]
gi|336408161|ref|ZP_08588655.1| thymidine kinase [Bacteroides sp. 2_1_56FAA]
gi|375356994|ref|YP_005109766.1| putative thymidine kinase [Bacteroides fragilis 638R]
gi|383116907|ref|ZP_09937655.1| thymidine kinase [Bacteroides sp. 3_2_5]
gi|423248639|ref|ZP_17229655.1| thymidine kinase [Bacteroides fragilis CL03T00C08]
gi|423253589|ref|ZP_17234520.1| thymidine kinase [Bacteroides fragilis CL03T12C07]
gi|423259052|ref|ZP_17239975.1| thymidine kinase [Bacteroides fragilis CL07T00C01]
gi|423263977|ref|ZP_17242980.1| thymidine kinase [Bacteroides fragilis CL07T12C05]
gi|423269438|ref|ZP_17248410.1| thymidine kinase [Bacteroides fragilis CL05T00C42]
gi|423273003|ref|ZP_17251950.1| thymidine kinase [Bacteroides fragilis CL05T12C13]
gi|423282129|ref|ZP_17261014.1| thymidine kinase [Bacteroides fragilis HMW 615]
gi|60389934|sp|Q64YL9.1|KITH_BACFR RecName: Full=Thymidine kinase
gi|52214814|dbj|BAD47407.1| thymidine kinase [Bacteroides fragilis YCH46]
gi|251947796|gb|EES88078.1| thymidine kinase [Bacteroides sp. 3_2_5]
gi|263254675|gb|EEZ26109.1| thymidine kinase [Bacteroides sp. 2_1_16]
gi|301161675|emb|CBW21215.1| putative thymidine kinase [Bacteroides fragilis 638R]
gi|335939461|gb|EGN01335.1| thymidine kinase [Bacteroides sp. 2_1_56FAA]
gi|387776632|gb|EIK38732.1| thymidine kinase [Bacteroides fragilis CL07T00C01]
gi|392655218|gb|EIY48861.1| thymidine kinase [Bacteroides fragilis CL03T12C07]
gi|392659339|gb|EIY52959.1| thymidine kinase [Bacteroides fragilis CL03T00C08]
gi|392700284|gb|EIY93446.1| thymidine kinase [Bacteroides fragilis CL05T00C42]
gi|392706243|gb|EIY99366.1| thymidine kinase [Bacteroides fragilis CL07T12C05]
gi|392708567|gb|EIZ01674.1| thymidine kinase [Bacteroides fragilis CL05T12C13]
gi|404581697|gb|EKA86392.1| thymidine kinase [Bacteroides fragilis HMW 615]
Length = 199
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNSISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V++A LD F+ F + +L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDVCNQLANNGVRVIIAGLDMDFKGVPFGPMPALCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V++A LD F+ F + +L +A+ V
Sbjct: 111 -------------------------LANNGVRVIIAGLDMDFKGVPFGPMPALCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNDKQV 172
>gi|253747860|gb|EET02334.1| Thymidine kinase [Giardia intestinalis ATCC 50581]
Length = 390
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Query: 23 RYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQ 82
R A+ R ++V++ D RY+ + THD K++A A L + + D + +DEGQ
Sbjct: 25 RLIAAHKRVLVVKHTFDTRYNDNFLTTHDNTKISAKQATLLGEFTGEFDNYDALIVDEGQ 84
Query: 83 FFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 142
FF D+V+ + + G V ++AL G F+R F I L PLA + +A+C C A
Sbjct: 85 FFADIVTAVQCALSKGLYVYISALSGNFKREPFEVIPQLFPLASAIYLRSAICAICHAPA 144
Query: 143 AFTKRI-GQEKEVILG 157
F+ R Q +E+++G
Sbjct: 145 PFSARFSAQTEEIVIG 160
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 46/196 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+ILGPMF+GK+TEL+ R A+ R ++V++ D RY+ ++THD K++A A L
Sbjct: 6 LILGPMFAGKSTELVGIHSRLIAAHKRVLVVKHTFDTRYNDNFLTTHDNTKISAKQATLL 65
Query: 214 NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
+ + D + +DEGQF
Sbjct: 66 GEFTGEFDNYDALIVDEGQF---------------------------------------- 85
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
F D+V+ + + G V ++AL G F+R F I L PLA + +A+C
Sbjct: 86 ------FADIVTAVQCALSKGLYVYISALSGNFKREPFEVIPQLFPLASAIYLRSAICAI 139
Query: 334 CFRDAAFTKRIGQEKE 349
C A F+ R + E
Sbjct: 140 CHAPAPFSARFSAQTE 155
>gi|297566613|ref|YP_003685585.1| thymidine kinase [Meiothermus silvanus DSM 9946]
gi|296851062|gb|ADH64077.1| Thymidine kinase [Meiothermus silvanus DSM 9946]
Length = 203
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 49/204 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
EV++GPMFSGK+ ELIRR++R A M+ + DDRY V +HD +++ A+S
Sbjct: 12 EVVVGPMFSGKSEELIRRVKRALIAGQTVMVFKPRLDDRYHASDVVSHDGKRIEALSVAD 71
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ EL++ +P+ +V+ +DE QF +
Sbjct: 72 SSELSRNLPNPLP-EVVAVDEAQFFD---------------------------------- 96
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
P +V +A+ G V+V LD F+ F + L+ AE +EKLTA
Sbjct: 97 -----------PGLVKLLLELAHQGVRVIVGGLDMDFRAEPFGIMPELLARAEYIEKLTA 145
Query: 330 VCMSCFRDAAFTKRIGQEKEVRIE 353
VC C A T+R+ + R +
Sbjct: 146 VCPVCGAPATRTQRLVNGQPARFD 169
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 5/136 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDI 73
RR++R A M+ + DDRY V +HD +++ A+S + EL++ +P+
Sbjct: 26 LIRRVKRALIAGQTVMVFKPRLDDRYHASDVVSHDGKRIEALSVADSSELSRNLPNPLP- 84
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+V+ +DE QFF P +V +A+ G V+V LD F+ F + L+ AE +EKLT
Sbjct: 85 EVVAVDEAQFFDPGLVKLLLELAHQGVRVIVGGLDMDFRAEPFGIMPELLARAEYIEKLT 144
Query: 133 AVCMSCFRDAAFTKRI 148
AVC C A T+R+
Sbjct: 145 AVCPVCGAPATRTQRL 160
>gi|414161682|ref|ZP_11417936.1| thymidine kinase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410875394|gb|EKS23314.1| thymidine kinase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 199
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ ELIRR++R YA + ++ + A D+RY EKV +H+ + A++
Sbjct: 11 ECITGSMFSGKSEELIRRLKRGMYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEAITIKA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ +DVIGIDE QF E
Sbjct: 71 AEEIFEQDLTGVDVIGIDEVQFFE------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
VV A+ +A G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------HSVVDIAQELAEQGHRVIVAGLDMDFRGEPFEPMPQLMAVSELVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 AVCGAPASRTQRL 158
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + ++ + A D+RY EKV +H+ + A++ ++ +DV
Sbjct: 25 LIRRLKRGMYAKQKVVVFKPAIDNRYHKEKVVSHNGNAIEAITIKAAEEIFEQDLTGVDV 84
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QFF VV A+ +A G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IGIDEVQFFEHSVVDIAQELAEQGHRVIVAGLDMDFRGEPFEPMPQLMAVSELVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CAVCGAPASRTQRL 158
>gi|60680149|ref|YP_210293.1| thymidine kinase [Bacteroides fragilis NCTC 9343]
gi|73920097|sp|Q5LHP5.1|KITH_BACFN RecName: Full=Thymidine kinase
gi|60491583|emb|CAH06335.1| putative thymidine kinase [Bacteroides fragilis NCTC 9343]
Length = 199
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNSISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V++A LD F+ F + +L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDVCNQLANNGVRVIIAGLDMDFKGIPFGPMPALCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 47/207 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNS 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V++A LD F+ F + +L +A+ V
Sbjct: 111 -------------------------LANNGVRVIIAGLDMDFKGIPFGPMPALCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEV 350
K+ A+C+ C + A+F+ R + +K+V
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNDKQV 172
>gi|393781736|ref|ZP_10369930.1| thymidine kinase [Bacteroides salyersiae CL02T12C01]
gi|392676340|gb|EIY69778.1| thymidine kinase [Bacteroides salyersiae CL02T12C01]
Length = 199
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 46/199 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPAIDVRYSEADVVSHDSNT 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----SSLIEVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V++A LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIIAGLDMDFKGNPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR 343
K+ A+C+ C + A+F+ R
Sbjct: 146 SKVHAICVKCGQLASFSHR 164
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRLKRAKFARQRVEIFKPAIDVRYSEADVVSHDSNTISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V++A LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSSLIEVCNQLANNGIRVIIAGLDMDFKGNPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
>gi|379335176|gb|AFD03164.1| thymidine kinase [uncultured bacterium W5-102b]
Length = 227
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 89/196 (45%), Gaps = 45/196 (22%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EV+ G MFSGK+ EL+RR+RR Q A + + + A D+RYD V +H+ ++ A
Sbjct: 8 GGWIEVVCGSMFSGKSEELMRRLRRAQIARLKVAVYKPALDNRYDDTAVVSHNGNRIDAK 67
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ ++ + DV+GIDE QF D++
Sbjct: 68 PVETASDILRMAGNSDVVGIDEAQFF------DEH------------------------- 96
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
+V + +A+AGK VV+A LD F+ F + L+ +AE V KL
Sbjct: 97 --------------IVEVSLRLADAGKRVVLACLDMDFKGEPFGPVPPLLTVAEFVTKLQ 142
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A T+R+
Sbjct: 143 AICQQCGGPATRTQRL 158
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q A + + + A D+RYD V +H+ ++ A + ++ + DV+GI
Sbjct: 28 RRLRRAQIARLKVAVYKPALDNRYDDTAVVSHNGNRIDAKPVETASDILRMAGNSDVVGI 87
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V + +A+AGK VV+A LD F+ F + L+ +AE V KL A+C
Sbjct: 88 DEAQFFDEHIVEVSLRLADAGKRVVLACLDMDFKGEPFGPVPPLLTVAEFVTKLQAICQQ 147
Query: 138 CFRDAAFTKRI 148
C A T+R+
Sbjct: 148 CGGPATRTQRL 158
>gi|311977636|ref|YP_003986756.1| thymidine kinase [Acanthamoeba polyphaga mimivirus]
gi|82050785|sp|Q5UP25.1|KITH_MIMIV RecName: Full=Thymidine kinase
gi|55416880|gb|AAV50530.1| thymidine kinase [Acanthamoeba polyphaga mimivirus]
gi|308204290|gb|ADO18091.1| thymidine kinase [Acanthamoeba polyphaga mimivirus]
gi|339061191|gb|AEJ34495.1| thymidine kinase [Acanthamoeba polyphaga mimivirus]
gi|398257106|gb|EJN40714.1| thymidine kinase [Acanthamoeba polyphaga lentillevirus]
Length = 225
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 24/204 (11%)
Query: 15 VHFCRRIRRYQYANYRCMIVRYAKDDRYDTE-----KVATHDQ---QKLTAVSAVELNK- 65
F R I R + A +C+I++ +D RYD++ V TH+ + + LNK
Sbjct: 16 TEFIRLIERKKIAGKKCLIIKNYRDIRYDSDDNDKYHVTTHNNIIYRNCDIMFTDNLNKT 75
Query: 66 -LIPHTKD-IDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 123
LI ++ DVIGI+EG FF V F+ +AN G V+++ L+ ++++ F++I LI
Sbjct: 76 SLIDTFQEKYDVIGIEEGFFFEGVTDFSNELANRGMEVIISTLESSYKQEIFSEIGKLIA 135
Query: 124 LAECVEKLTAVCMSC-FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCM 182
++E V KL A+CM C DA+FT R + E I L+ I +YQ +C+
Sbjct: 136 ISEDVIKLKAICMGCKISDASFTIRTIESDEKI-----------LVGGIDKYQSVCRKCL 184
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLT 206
+ + + + TE ++Q +L+
Sbjct: 185 NL-HKRKNTLSTESEQINNQTELS 207
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 58/202 (28%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-----KVSTHDQ---QKL 205
I+GPMFSGKTTE IR I R + A +C+I++ +D RYD++ V+TH+ +
Sbjct: 5 TIIGPMFSGKTTEFIRLIERKKIAGKKCLIIKNYRDIRYDSDDNDKYHVTTHNNIIYRNC 64
Query: 206 TAVSAVELNK--LIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPF 262
+ LNK LI ++ DVIGI+EG F
Sbjct: 65 DIMFTDNLNKTSLIDTFQEKYDVIGIEEGFF----------------------------- 95
Query: 263 KTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
F V F+ +AN G V+++ L+ ++++ F++I LI ++E
Sbjct: 96 -----------------FEGVTDFSNELANRGMEVIISTLESSYKQEIFSEIGKLIAISE 138
Query: 323 CVEKLTAVCMSC-FRDAAFTKR 343
V KL A+CM C DA+FT R
Sbjct: 139 DVIKLKAICMGCKISDASFTIR 160
>gi|345304443|ref|YP_004826345.1| thymidine kinase [Rhodothermus marinus SG0.5JP17-172]
gi|345113676|gb|AEN74508.1| Thymidine kinase [Rhodothermus marinus SG0.5JP17-172]
Length = 271
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 45/196 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q A R + + D RY V +HD+ L +
Sbjct: 76 EVICGSMFSGKTEELIRRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRSTPVDS 135
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ DV+GIDE QF ++
Sbjct: 136 AEQILLLAGSADVVGIDEAQFFDMT----------------------------------- 160
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V + +AN GK V+VA LD + F + L+ +AE V KL A+C
Sbjct: 161 ----------LVDVCQQLANDGKRVIVAGLDQDYMGRPFEPMPQLMAVAEYVTKLHAICA 210
Query: 333 SCFRDAAFTKRIGQEK 348
C A ++R+ E+
Sbjct: 211 VCGAPANHSQRLTDEE 226
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q A R + + D RY V +HD+ L + +++ DV+GI
Sbjct: 92 RRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRSTPVDSAEQILLLAGSADVVGI 151
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V + +AN GK V+VA LD + F + L+ +AE V KL A+C
Sbjct: 152 DEAQFFDMTLVDVCQQLANDGKRVIVAGLDQDYMGRPFEPMPQLMAVAEYVTKLHAICAV 211
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A ++R+ +E V+LG
Sbjct: 212 CGAPANHSQRLTDEEGRVVLG 232
>gi|410101754|ref|ZP_11296682.1| thymidine kinase [Parabacteroides sp. D25]
gi|409239552|gb|EKN32336.1| thymidine kinase [Parabacteroides sp. D25]
Length = 196
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY + V +HD + + + ++ T +IDV+GI
Sbjct: 35 RRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDSSSSILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V+ +A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLVNVCNQLAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICVK 154
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C R A + RI G +K V LG
Sbjct: 155 CGRLAYVSHRIVGNDKRVFLG 175
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY + V +HD + +
Sbjct: 19 EVICGSMFSGKTEELIRRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDS 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 79 SSSILLFTSEIDVVGIDEAQFFD-----EGLVNVCNQ----------------------- 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 111 -----------------LAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICV 153
Query: 333 SCFRDAAFTKRI-GQEKEV 350
C R A + RI G +K V
Sbjct: 154 KCGRLAYVSHRIVGNDKRV 172
>gi|407478352|ref|YP_006792229.1| thymidine kinase [Exiguobacterium antarcticum B7]
gi|407062431|gb|AFS71621.1| Thymidine kinase [Exiguobacterium antarcticum B7]
Length = 206
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS-AV 211
EVI G MFSGK+ ELIRR+RR QY + + A DDRY E V +H + A+ A
Sbjct: 12 EVICGSMFSGKSEELIRRVRRAQYGKLPVQVFKPAIDDRYHEEHVVSHGGNSVIAIPMAT 71
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ + ++ V+ IDE QF +
Sbjct: 72 SRDVYVAVAEETQVVAIDEVQFFD------------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++VS E++A GK V+ A LD F+ F + L+ AE V KL A+C
Sbjct: 96 ---------DEIVSVIEALAQDGKRVICAGLDQDFRAEPFGKMPELLARAEFVTKLQAIC 146
Query: 332 MSCFRDAAFTKRI 344
+SC A+ T+R+
Sbjct: 147 LSCGDPASRTQRL 159
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS-AVELNKLIPHTKDIDVIG 77
RR+RR QY + + A DDRY E V +H + A+ A + + ++ V+
Sbjct: 28 RRVRRAQYGKLPVQVFKPAIDDRYHEEHVVSHGGNSVIAIPMATSRDVYVAVAEETQVVA 87
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D +VS E++A GK V+ A LD F+ F + L+ AE V KL A+C+
Sbjct: 88 IDEVQFFDDEIVSVIEALAQDGKRVICAGLDQDFRAEPFGKMPELLARAEFVTKLQAICL 147
Query: 137 SCFRDAAFTKRI 148
SC A+ T+R+
Sbjct: 148 SCGDPASRTQRL 159
>gi|429727133|ref|ZP_19261912.1| thymidine kinase [Prevotella sp. oral taxon 473 str. F0040]
gi|429144837|gb|EKX87944.1| thymidine kinase [Prevotella sp. oral taxon 473 str. F0040]
Length = 174
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RRI+R + A + I + D RY +V +HD Q + +V +++ DV+G+
Sbjct: 11 RRIKRARIAQQQVKIFKPCIDTRYSDVEVVSHDSQSVASVPVASAAEMVSLAHAADVVGV 70
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +AN GK V+VA LD F+ F + +L +AE V K+ AVC+
Sbjct: 71 DEAQFFDEGLVEVCNLLANQGKRVIVAGLDMDFRGNPFGPMPALCAVAEDVTKVHAVCVR 130
Query: 138 CFRDAAFTKR-IGQEKEVILGPM 159
C A F+ R + + +V+LG M
Sbjct: 131 CGELAQFSHRLVAGDNQVMLGEM 153
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 45/186 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRRI+R + A + I + D RY +V +HD Q + +V +++
Sbjct: 1 MFSGKTEELIRRIKRARIAQQQVKIFKPCIDTRYSDVEVVSHDSQSVASVPVASAAEMVS 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
DV+G+DE QF +
Sbjct: 61 LAHAADVVGVDEAQFFD------------------------------------------- 77
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
+V +AN GK V+VA LD F+ F + +L +AE V K+ AVC+ C A
Sbjct: 78 --EGLVEVCNLLANQGKRVIVAGLDMDFRGNPFGPMPALCAVAEDVTKVHAVCVRCGELA 135
Query: 339 AFTKRI 344
F+ R+
Sbjct: 136 QFSHRL 141
>gi|254838351|gb|ACT83386.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 117
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
D + +DEGQFFPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTA
Sbjct: 1 DAVAVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTA 60
Query: 134 VCMSC-FRDAAFTKRIGQEKEVI 155
VCM C RDA FT RI Q +++
Sbjct: 61 VCMKCKMRDAPFTVRISQGTDLV 83
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDA 338
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM C RDA
Sbjct: 11 FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCMKCKMRDA 70
Query: 339 AFTKRIGQEKEV 350
FT RI Q ++
Sbjct: 71 PFTVRISQGTDL 82
>gi|226355534|ref|YP_002785274.1| thymidine kinase [Deinococcus deserti VCD115]
gi|259494452|sp|C1D0Z6.1|KITH_DEIDV RecName: Full=Thymidine kinase
gi|226317524|gb|ACO45520.1| putative thymidine kinase [Deinococcus deserti VCD115]
Length = 202
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 89/207 (42%), Gaps = 56/207 (27%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI+GPMFSGK+ ELIRR+ R A R + + A DDRY V++H + + A+
Sbjct: 8 GGHLEVIVGPMFSGKSEELIRRVTRALIARQRVQVFKPAVDDRYHESAVASHAGRTVGAL 67
Query: 209 SAVELNKLIPHTKD-----------IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPI 257
+ ++ + H DVIGIDE QF
Sbjct: 68 AVGDVADIRAHLSGEAPLLQASAEMPDVIGIDEVQFFG---------------------- 105
Query: 258 KRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSL 317
P++V A +A+AG V++A LD F+ F + L
Sbjct: 106 -----------------------PELVPLALELADAGVRVILAGLDLDFRAEPFGCMPDL 142
Query: 318 IPLAECVEKLTAVCMSCFRDAAFTKRI 344
+ AE VEKLTA+C C A ++R+
Sbjct: 143 LARAESVEKLTAICTQCGAPATRSQRL 169
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD---- 72
RR+ R A R + + A DDRY VA+H + + A++ ++ + H
Sbjct: 26 LIRRVTRALIARQRVQVFKPAVDDRYHESAVASHAGRTVGALAVGDVADIRAHLSGEAPL 85
Query: 73 -------IDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPL 124
DVIGIDE QFF P++V A +A+AG V++A LD F+ F + L+
Sbjct: 86 LQASAEMPDVIGIDEVQFFGPELVPLALELADAGVRVILAGLDLDFRAEPFGCMPDLLAR 145
Query: 125 AECVEKLTAVCMSCFRDAAFTKRI 148
AE VEKLTA+C C A ++R+
Sbjct: 146 AESVEKLTAICTQCGAPATRSQRL 169
>gi|110003946|emb|CAK98286.1| thymidine kinase protein [Spiroplasma citri]
Length = 194
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-DV 75
F RR+ R YA + + + D+RY +V +H ++ + A+S + ++L+ + K +V
Sbjct: 28 FIRRLVRLSYAKFEIQVFKPTIDNRYSENQVVSHSKKAVEAISVKDSDELLANLKTTTNV 87
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
GIDE QFF + +V A+S+A+ G IV+V LD F+ F +I L+ AE V+KL A+
Sbjct: 88 AGIDEVQFFDNNIVKIADSLADKGIIVIVNGLDKDFRGEAFTNIEQLMTRAEEVKKLHAI 147
Query: 135 CMSCFRDAAFTKRI 148
C+ C A T+R+
Sbjct: 148 CVKCGNLANRTQRL 161
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT E IRR+ R YA + + + D+RY +V +H ++ + A+S +
Sbjct: 14 EVITGCMFAGKTEEFIRRLVRLSYAKFEIQVFKPTIDNRYSENQVVSHSKKAVEAISVKD 73
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++L+ + K +V GIDE QF +
Sbjct: 74 SDELLANLKTTTNVAGIDEVQFFD------------------------------------ 97
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V A+S+A+ G IV+V LD F+ F +I L+ AE V+KL A+C
Sbjct: 98 ---------NNIVKIADSLADKGIIVIVNGLDKDFRGEAFTNIEQLMTRAEEVKKLHAIC 148
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 149 VKCGNLANRTQRL 161
>gi|373855336|ref|ZP_09598082.1| Thymidine kinase [Bacillus sp. 1NLA3E]
gi|372454405|gb|EHP27870.1| Thymidine kinase [Bacillus sp. 1NLA3E]
Length = 206
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + ++ + D+RY E V +H+ A+
Sbjct: 11 EVICGSMFSGKSEELIRRVRRSQFAKQKIVVFKPKIDNRYSKEAVVSHNGTSFIAIPISH 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
N + + ++DVI IDE QF DK
Sbjct: 71 SNDIFQYIDAEVDVIAIDEVQFF------DK----------------------------- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V+ +++A +G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 96 ----------DIVNVIQNLAYSGYRVITAGLDQDFRGEPFGQMPALLSIAEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDVIG 77
RR+RR Q+A + ++ + D+RY E V +H+ A+ N + + ++DVI
Sbjct: 27 RRVRRSQFAKQKIVVFKPKIDNRYSKEAVVSHNGTSFIAIPISHSNDIFQYIDAEVDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V+ +++A +G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 87 IDEVQFFDKDIVNVIQNLAYSGYRVITAGLDQDFRGEPFGQMPALLSIAEQVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|256839647|ref|ZP_05545156.1| thymidine kinase [Parabacteroides sp. D13]
gi|256738577|gb|EEU51902.1| thymidine kinase [Parabacteroides sp. D13]
Length = 197
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY + V +HD + + + ++ T +IDV+GI
Sbjct: 36 RRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDSSSSILLFTSEIDVVGI 95
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V+ +A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 96 DEAQFFDEGLVNVCNQLAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICVK 155
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C R A + RI G +K V LG
Sbjct: 156 CGRLAYVSHRIVGNDKRVFLG 176
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY + V +HD + +
Sbjct: 20 EVICGSMFSGKTEELIRRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDS 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 80 SSSILLFTSEIDVVGIDEAQFFD-----EGLVNVCNQ----------------------- 111
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 112 -----------------LAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICV 154
Query: 333 SCFRDAAFTKRI-GQEKEV 350
C R A + RI G +K V
Sbjct: 155 KCGRLAYVSHRIVGNDKRV 173
>gi|85818654|gb|EAQ39814.1| Thymidine kinase [Dokdonia donghaensis MED134]
Length = 218
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RYD E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDVRYDEEMVVSHDSNEIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ D DV+GIDE QF + D+ + VC +
Sbjct: 77 AANIPILADDCDVVGIDEAQFFD-----DEIVKVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
A ++ R Q +++
Sbjct: 152 RTGNLAQYSYRKAQGQDI 169
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR++R Q+A + I + A D RYD E V +HD ++ + + D DV
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPAVDVRYDEEMVVSHDSNEIRSTPVPAAANIPILADDCDV 89
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF D +V +AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 90 VGIDEAQFFDDEIVKVCNDLANRGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAV 149
Query: 135 CMSCFRDAAFTKRIGQEKEVIL 156
C A ++ R Q +++++
Sbjct: 150 CTRTGNLAQYSYRKAQGQDIVM 171
>gi|254838349|gb|ACT83385.1| thymidine kinase [Cyprinid herpesvirus 3]
gi|254838355|gb|ACT83388.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 117
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
D + +DEGQFFPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTA
Sbjct: 1 DAVAVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTA 60
Query: 134 VCMSC-FRDAAFTKRIGQEKEVI 155
VCM C RDA FT RI Q +++
Sbjct: 61 VCMKCKMRDAPFTVRISQGTDLV 83
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDA 338
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM C RDA
Sbjct: 11 FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCMKCKMRDA 70
Query: 339 AFTKRIGQEKEV 350
FT RI Q ++
Sbjct: 71 PFTVRISQGTDL 82
>gi|15231872|ref|NP_187437.1| Thymidine kinase [Arabidopsis thaliana]
gi|6466962|gb|AAF13097.1|AC009176_24 putative thymidine kinase [Arabidopsis thaliana]
gi|6648192|gb|AAF21190.1|AC013483_14 putative thymidine kinase [Arabidopsis thaliana]
gi|13878163|gb|AAK44159.1|AF370344_1 putative thymidine kinase [Arabidopsis thaliana]
gi|23296948|gb|AAN13208.1| putative thymidine kinase [Arabidopsis thaliana]
gi|332641084|gb|AEE74605.1| Thymidine kinase [Arabidopsis thaliana]
Length = 238
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 84/197 (42%), Gaps = 52/197 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
VI+GPMFSGK+T L+RRI+ +++ +KD RY + V THD + +
Sbjct: 34 HVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPD 93
Query: 213 LNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
L + +DVIGIDE QF
Sbjct: 94 LMSFPEKFGLDAYNKLDVIGIDEAQF---------------------------------- 119
Query: 268 ENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
F D+ F +A+ GKIV+VA LDG + R F +L +IP+A+ V K
Sbjct: 120 ------------FGDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTK 167
Query: 327 LTAVCMSCFRDAAFTKR 343
LTA C C A FT R
Sbjct: 168 LTARCEVCGHKAFFTLR 184
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDI 73
RRI+ +++ +KD RY + V THD + +L + +
Sbjct: 50 RRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLDAYNKL 109
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F +A+ GKIV+VA LDG + R F +L +IP+A+ V KLT
Sbjct: 110 DVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTKLT 169
Query: 133 AVCMSCFRDAAFTKR 147
A C C A FT R
Sbjct: 170 ARCEVCGHKAFFTLR 184
>gi|21554005|gb|AAM63086.1| putative thymidine kinase [Arabidopsis thaliana]
Length = 238
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 84/197 (42%), Gaps = 52/197 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
VI+GPMFSGK+T L+RRI+ +++ +KD RY + V THD + +
Sbjct: 34 HVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPD 93
Query: 213 LNKL-----IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
L + +DVIGIDE QF
Sbjct: 94 LMSFPEKFGLDAYNKLDVIGIDEAQF---------------------------------- 119
Query: 268 ENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
F D+ F +A+ GKIV+VA LDG + R F +L +IP+A+ V K
Sbjct: 120 ------------FGDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTK 167
Query: 327 LTAVCMSCFRDAAFTKR 343
LTA C C A FT R
Sbjct: 168 LTARCEVCGHKAFFTLR 184
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL-----IPHTKDI 73
RRI+ +++ +KD RY + V THD + +L + +
Sbjct: 50 RRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSFPEKFGLDAYNKL 109
Query: 74 DVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D+ F +A+ GKIV+VA LDG + R F +L +IP+A+ V KLT
Sbjct: 110 DVIGIDEAQFFGDLYEFCCKVADDDGKIVIVAGLDGDYLRRSFGAVLDIIPIADSVTKLT 169
Query: 133 AVCMSCFRDAAFTKR 147
A C C A FT R
Sbjct: 170 ARCEVCGHKAFFTLR 184
>gi|385809422|ref|YP_005845818.1| thymidine kinase [Ignavibacterium album JCM 16511]
gi|383801470|gb|AFH48550.1| Thymidine kinase [Ignavibacterium album JCM 16511]
Length = 189
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELI+R++R Q A + I + A D RY ++ + +H +Q + +
Sbjct: 14 EVIAGCMFSGKTEELIKRLKRAQIAKQKLKIFKPAIDIRYSSDSIVSHSEQSMPSALVRH 73
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ + D VIGIDE QF S+ + VC E
Sbjct: 74 AKEILSLSDDAQVIGIDEAQFF-----SNDLVDVCIE----------------------- 105
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN GK V+VA LD ++ F + L+ +AE + KL A+C+
Sbjct: 106 -----------------LANKGKRVIVAGLDQDYRGVPFEPMPQLLAVAEYITKLHAICV 148
Query: 333 SCFRDAAFTKR 343
C A T+R
Sbjct: 149 VCGNPANKTQR 159
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
+R++R Q A + I + A D RY ++ + +H +Q + + +++ + D VIGI
Sbjct: 30 KRLKRAQIAKQKLKIFKPAIDIRYSSDSIVSHSEQSMPSALVRHAKEILSLSDDAQVIGI 89
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D+V +AN GK V+VA LD ++ F + L+ +AE + KL A+C+
Sbjct: 90 DEAQFFSNDLVDVCIELANKGKRVIVAGLDQDYRGVPFEPMPQLLAVAEYITKLHAICVV 149
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A T+R + + V++G
Sbjct: 150 CGNPANKTQRKVAVKDRVVVG 170
>gi|313147486|ref|ZP_07809679.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423280185|ref|ZP_17259098.1| thymidine kinase [Bacteroides fragilis HMW 610]
gi|424666280|ref|ZP_18103316.1| thymidine kinase [Bacteroides fragilis HMW 616]
gi|313136253|gb|EFR53613.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404574533|gb|EKA79284.1| thymidine kinase [Bacteroides fragilis HMW 616]
gi|404584521|gb|EKA89186.1| thymidine kinase [Bacteroides fragilis HMW 610]
Length = 199
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNTISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V++A LD F+ F + +L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSGLIDVCNQLANNGVRVIIAGLDMDFKGIPFGPMPALCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVLLG 175
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 46/199 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + A D RY V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRMKRAKFARQRVEIFKPAIDTRYSEGDVVSHDSNT 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----SGLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V++A LD F+ F + +L +A+ V
Sbjct: 111 -------------------------LANNGVRVIIAGLDMDFKGIPFGPMPALCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR 343
K+ A+C+ C + A+F+ R
Sbjct: 146 SKVHAICVKCGQLASFSHR 164
>gi|268318148|ref|YP_003291867.1| thymidine kinase [Rhodothermus marinus DSM 4252]
gi|262335682|gb|ACY49479.1| Thymidine kinase [Rhodothermus marinus DSM 4252]
Length = 213
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 45/196 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q A R + + D RY V +HD+ L +
Sbjct: 18 EVICGSMFSGKTEELIRRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRSTPVDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ DV+GIDE QF ++
Sbjct: 78 AEQILLLAGSADVVGIDEAQFFDMT----------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V + +AN GK V+VA LD + F + L+ +AE V KL A+C
Sbjct: 103 ----------LVDVCQQLANDGKRVIVAGLDQDYMGRPFEPMPQLMAVAEYVTKLHAICA 152
Query: 333 SCFRDAAFTKRIGQEK 348
C A ++R+ E+
Sbjct: 153 VCGAPANHSQRLTDEE 168
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q A R + + D RY V +HD+ L + +++ DV+GI
Sbjct: 34 RRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRSTPVDSAEQILLLAGSADVVGI 93
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V + +AN GK V+VA LD + F + L+ +AE V KL A+C
Sbjct: 94 DEAQFFDMTLVDVCQQLANDGKRVIVAGLDQDYMGRPFEPMPQLMAVAEYVTKLHAICAV 153
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A ++R+ +E V+LG
Sbjct: 154 CGAPANHSQRLTDEEGRVVLG 174
>gi|150007356|ref|YP_001302099.1| thymidine kinase [Parabacteroides distasonis ATCC 8503]
gi|262382069|ref|ZP_06075207.1| thymidine kinase [Bacteroides sp. 2_1_33B]
gi|301310642|ref|ZP_07216581.1| thymidine kinase [Bacteroides sp. 20_3]
gi|423332111|ref|ZP_17309895.1| thymidine kinase [Parabacteroides distasonis CL03T12C09]
gi|423336893|ref|ZP_17314640.1| thymidine kinase [Parabacteroides distasonis CL09T03C24]
gi|149935780|gb|ABR42477.1| thymidine kinase [Parabacteroides distasonis ATCC 8503]
gi|262297246|gb|EEY85176.1| thymidine kinase [Bacteroides sp. 2_1_33B]
gi|300832216|gb|EFK62847.1| thymidine kinase [Bacteroides sp. 20_3]
gi|409229952|gb|EKN22824.1| thymidine kinase [Parabacteroides distasonis CL03T12C09]
gi|409239912|gb|EKN32695.1| thymidine kinase [Parabacteroides distasonis CL09T03C24]
Length = 196
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY + V +HD + + + ++ T +IDV+GI
Sbjct: 35 RRLKRAKFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDSSSSILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V+ +A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLVNVCNQLAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICVK 154
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C R A + RI G +K V LG
Sbjct: 155 CGRLAYVSHRIVGNDKRVFLG 175
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY + V +HD + +
Sbjct: 19 EVICGSMFSGKTEELIRRLKRAKFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDS 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 79 SSSILLFTSEIDVVGIDEAQFFD-----EGLVNVCNQ----------------------- 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 111 -----------------LAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICV 153
Query: 333 SCFRDAAFTKRI-GQEKEV 350
C R A + RI G +K V
Sbjct: 154 KCGRLAYVSHRIVGNDKRV 172
>gi|291515682|emb|CBK64892.1| Thymidine kinase [Alistipes shahii WAL 8301]
Length = 191
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A+ R I + D RY E+V +HD + + ++ T D+DV+GI
Sbjct: 29 RRLKRAKFAHQRVEIFKPRIDVRYSEEEVVSHDANAIRSTPVESPQNILLMTADVDVVGI 88
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +AN G V+VA LD + F + +L+ AE V K+ A+C+
Sbjct: 89 DEAQFFDESIVDVCRRLANNGVRVIVAGLDMDYTGKPFGPMPALMATAEYVTKVHAICVR 148
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A + R+ EK+V+LG
Sbjct: 149 CGNLAHHSHRLTSDEKQVMLG 169
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R ++A+ R I + D RY E+V +HD + +
Sbjct: 13 EVVCGSMFSGKTEELIRRLKRAKFAHQRVEIFKPRIDVRYSEEEVVSHDANAIRSTPVES 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T D+DV+GIDE QF + + + VCR
Sbjct: 73 PQNILLMTADVDVVGIDEAQFFD-----ESIVDVCRR----------------------- 104
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD + F + +L+ AE V K+ A+C+
Sbjct: 105 -----------------LANNGVRVIVAGLDMDYTGKPFGPMPALMATAEYVTKVHAICV 147
Query: 333 SCFRDAAFTKRI-GQEKEVRI 352
C A + R+ EK+V +
Sbjct: 148 RCGNLAHHSHRLTSDEKQVML 168
>gi|303273274|ref|XP_003055998.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462082|gb|EEH59374.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 208
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 87/203 (42%), Gaps = 52/203 (25%)
Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA 210
E +I GPMFSGKTTEL+ R+ + + +V+ +D RY + + THD T S
Sbjct: 18 EIHLITGPMFSGKTTELLERVSQEEALGLVVSLVKSFEDFRYSCDHIVTHDGILRTCFSV 77
Query: 211 VELNKLIPHTKD-----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+LN++ D +D+ IDE QF+
Sbjct: 78 AKLNEIRSTLGDAEWRRVDIFAIDEAQFL------------------------------- 106
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
PD+ F + + K ++ A L+G F+R F +L L+PL + +
Sbjct: 107 ---------------PDLPRFCAAADSEKKKIIFAGLEGDFRREQFGKLLDLLPLCDSIF 151
Query: 326 KLTAVCMSC-FRDAAFTKRIGQE 347
KL+A C SC R A FT RI E
Sbjct: 152 KLSAKCCSCNIRPATFTSRISPE 174
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 6/125 (4%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-----IDVIGIDEGQFFPDV 87
+V+ +D RY + + THD T S +LN++ D +D+ IDE QF PD+
Sbjct: 50 LVKSFEDFRYSCDHIVTHDGILRTCFSVAKLNEIRSTLGDAEWRRVDIFAIDEAQFLPDL 109
Query: 88 VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDAAFTK 146
F + + K ++ A L+G F+R F +L L+PL + + KL+A C SC R A FT
Sbjct: 110 PRFCAAADSEKKKIIFAGLEGDFRREQFGKLLDLLPLCDSIFKLSAKCCSCNIRPATFTS 169
Query: 147 RIGQE 151
RI E
Sbjct: 170 RISPE 174
>gi|255014013|ref|ZP_05286139.1| thymidine kinase [Bacteroides sp. 2_1_7]
Length = 206
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY + V +HD + + + ++ T +IDV+GI
Sbjct: 45 RRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDSSSSILLFTSEIDVVGI 104
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V+ +A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 105 DEAQFFDEGLVNVCNQLAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICVK 164
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C R A + RI G +K V LG
Sbjct: 165 CGRLAYVSHRIVGNDKRVFLG 185
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 46/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY + V +HD + +
Sbjct: 29 EVICGSMFSGKTEELIRRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDS 88
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 89 SSSILLFTSEIDVVGIDEAQFFD-----EGLVNVCNQ----------------------- 120
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 121 -----------------LAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICV 163
Query: 333 SCFRDAAFTKRI-GQEKEV 350
C R A + RI G +K V
Sbjct: 164 KCGRLAYVSHRIVGNDKRV 182
>gi|435855222|ref|YP_007316541.1| thymidine kinase [Halobacteroides halobius DSM 5150]
gi|433671633|gb|AGB42448.1| thymidine kinase [Halobacteroides halobius DSM 5150]
Length = 211
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKD- 72
RR+ R A ++ + + D+RY +V TH K+TA + ++N I K+
Sbjct: 28 LIRRVERAMIAEQDILVFKPSIDNRYSDTEVTTHTGNKITAEIVDNVSDINHKIKEKKET 87
Query: 73 --IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
IDV+ IDEGQFF + +V A+ +A G V++A LD F GF I L+ AE V
Sbjct: 88 DTIDVVAIDEGQFFSEELVPLADELAQQGLRVIIAGLDTDFAGRGFKPIPELMARAEYVT 147
Query: 130 KLTAVCMSCFRDAAFTKRI--GQEKE-----VILGPMFSGKTTELIRRIRRYQYANYRC 181
KL AVC+ C A +R+ GQ V++G +G TTE RR + RC
Sbjct: 148 KLHAVCVKCANPATRNQRLIAGQPASIDDPVVVVG---AGSTTEWDDNPRRDEEYEARC 203
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK++ELIRR+ R A ++ + + D+RY +V+TH K+TA +
Sbjct: 14 EVITGVMFSGKSSELIRRVERAMIAEQDILVFKPSIDNRYSDTEVTTHTGNKITAEIVDN 73
Query: 210 AVELNKLIPHTKD---IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
++N I K+ IDV+ IDEGQF
Sbjct: 74 VSDINHKIKEKKETDTIDVVAIDEGQFFS------------------------------- 102
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
++V A+ +A G V++A LD F GF I L+ AE V K
Sbjct: 103 --------------EELVPLADELAQQGLRVIIAGLDTDFAGRGFKPIPELMARAEYVTK 148
Query: 327 LTAVCMSCFRDAAFTKRI 344
L AVC+ C A +R+
Sbjct: 149 LHAVCVKCANPATRNQRL 166
>gi|351737407|gb|AEQ60442.1| Thymidine kinase [Acanthamoeba castellanii mamavirus]
Length = 216
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 24/204 (11%)
Query: 15 VHFCRRIRRYQYANYRCMIVRYAKDDRYDTE-----KVATHDQ---QKLTAVSAVELNK- 65
F R I R + A +C+I++ +D RYD++ V TH+ + + LNK
Sbjct: 7 TEFIRLIERKKIAGKKCLIIKNYRDIRYDSDDNDKYHVTTHNNIIYRNCDIMFTDNLNKT 66
Query: 66 -LIPHTKD-IDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 123
LI ++ DVIGI+EG FF V F+ +AN G V+++ L+ ++++ F++I LI
Sbjct: 67 SLIDTFQEKYDVIGIEEGFFFEGVTDFSNELANRGMEVIISTLESSYKQEIFSEIGKLIA 126
Query: 124 LAECVEKLTAVCMSC-FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCM 182
++E V KL A+CM C DA+FT R + E I L+ I +YQ +C+
Sbjct: 127 ISEDVIKLKAICMGCKISDASFTIRTIESDEKI-----------LVGGIDKYQSVCRKCL 175
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLT 206
+ + + + TE ++Q +L+
Sbjct: 176 NL-HKRKNTLSTESEQINNQTELS 198
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 58/197 (29%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-----KVSTHDQ---QKLTAVSA 210
MFSGKTTE IR I R + A +C+I++ +D RYD++ V+TH+ + +
Sbjct: 1 MFSGKTTEFIRLIERKKIAGKKCLIIKNYRDIRYDSDDNDKYHVTTHNNIIYRNCDIMFT 60
Query: 211 VELNK--LIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
LNK LI ++ DVIGI+EG F
Sbjct: 61 DNLNKTSLIDTFQEKYDVIGIEEGFF---------------------------------- 86
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F V F+ +AN G V+++ L+ ++++ F++I LI ++E V KL
Sbjct: 87 ------------FEGVTDFSNELANRGMEVIISTLESSYKQEIFSEIGKLIAISEDVIKL 134
Query: 328 TAVCMSC-FRDAAFTKR 343
A+CM C DA+FT R
Sbjct: 135 KAICMGCKISDASFTIR 151
>gi|282880124|ref|ZP_06288844.1| thymidine kinase [Prevotella timonensis CRIS 5C-B1]
gi|281305997|gb|EFA98037.1| thymidine kinase [Prevotella timonensis CRIS 5C-B1]
Length = 199
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R ++A R I + A D RY E V +HDQ + +
Sbjct: 22 EVVCGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAMDVRYSAEDVVSHDQNSIPSTPIDT 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ +IDV+GIDE QF++ + VC +
Sbjct: 82 SSSILLLASNIDVVGIDEAQFLD-----QGLIDVCNQ----------------------- 113
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD FQ F I L +A+ V K+ A+C+
Sbjct: 114 -----------------LANKGIRVIVAGLDMDFQGKPFGPIPGLCAIADEVVKVHAICV 156
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 157 KCGALAYISHRL 168
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E V +HDQ + + + ++ +IDV+GI
Sbjct: 38 RRMKRAKFAKQRVEIFKPAMDVRYSAEDVVSHDQNSIPSTPIDTSSSILLLASNIDVVGI 97
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF ++ +AN G V+VA LD FQ F I L +A+ V K+ A+C+
Sbjct: 98 DEAQFLDQGLIDVCNQLANKGIRVIVAGLDMDFQGKPFGPIPGLCAIADEVVKVHAICVK 157
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + +K V+LG
Sbjct: 158 CGALAYISHRLVDNDKRVLLG 178
>gi|378706312|gb|AFC35113.1| hypothetical protein OtV6_205c [Ostreococcus tauri virus RT-2011]
Length = 176
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 52/204 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+G MFSGKT+ELIRR++R + R ++V AKD R + + THD K ++L
Sbjct: 5 IIMGNMFSGKTSELIRRLKRLKILEKRIVVVNSAKDTRSPEQVLKTHDNVKFDCYKVLDL 64
Query: 214 NKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L+ +D +++ IDE QF
Sbjct: 65 YELLNKDAFEDAEIVAIDEAQF-------------------------------------- 86
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDG-TFQRTGFNDILSLIPLAECVEKLTAV 330
FP++ F E + GK V++A LD FQR + +IL +P+A V KL+A+
Sbjct: 87 --------FPNLKKFVECCLDMGKDVIIAGLDADAFQRK-WGEILDCVPIACEVTKLSAL 137
Query: 331 CMSC--FRDAAFTKRIGQEKEVRI 352
C C R FTKRI ++ +
Sbjct: 138 CKYCRSGRPGPFTKRIVDNSDLEL 161
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 6/135 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDIDVI 76
RR++R + R ++V AKD R + + THD K ++L +L+ +D +++
Sbjct: 20 RRLKRLKILEKRIVVVNSAKDTRSPEQVLKTHDNVKFDCYKVLDLYELLNKDAFEDAEIV 79
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDG-TFQRTGFNDILSLIPLAECVEKLTAVC 135
IDE QFFP++ F E + GK V++A LD FQR + +IL +P+A V KL+A+C
Sbjct: 80 AIDEAQFFPNLKKFVECCLDMGKDVIIAGLDADAFQRK-WGEILDCVPIACEVTKLSALC 138
Query: 136 MSC--FRDAAFTKRI 148
C R FTKRI
Sbjct: 139 KYCRSGRPGPFTKRI 153
>gi|373461531|ref|ZP_09553270.1| thymidine kinase [Prevotella maculosa OT 289]
gi|371951835|gb|EHO69677.1| thymidine kinase [Prevotella maculosa OT 289]
Length = 194
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R ++A R I + D RY E V +HDQ + +
Sbjct: 16 EVVCGSMFSGKTEELIRRMKRAKFAKQRVEIFKPTVDTRYSDEDVVSHDQNAIHSTPIDA 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ D + VC E
Sbjct: 76 SGAILLLASDIDVVGIDEAQFLD-----DGLVDVCNE----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 108 -----------------LANKGVRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 RCGALAYVSHRL 162
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 32 RRMKRAKFAKQRVEIFKPTVDTRYSDEDVVSHDQNAIHSTPIDASGAILLLASDIDVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF D +V +AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 92 DEAQFLDDGLVDVCNELANKGVRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICVR 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + + V+LG
Sbjct: 152 CGALAYVSHRLVNNDHRVLLG 172
>gi|300774543|ref|ZP_07084406.1| thymidine kinase [Chryseobacterium gleum ATCC 35910]
gi|300506358|gb|EFK37493.1| thymidine kinase [Chryseobacterium gleum ATCC 35910]
Length = 195
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 45/194 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A I + D RY E V +H+Q K+ + +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAEMAGQNVEIFKPKLDVRYSEEDVVSHNQNKIRSTAVEN 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
N+++ + DV+GIDE QF +
Sbjct: 77 PNEILLLASNCDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN+G VV+A LD F F + +L+ AE V K+ A+C
Sbjct: 100 --------ESIVDIANQLANSGIRVVIAGLDMDFLGRPFGPMPNLMATAEYVTKVHAICK 151
Query: 333 SCFRDAAFTKRIGQ 346
A ++ RI Q
Sbjct: 152 RTGNLANYSMRISQ 165
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR+RR + A I + D RY E V +H+Q K+ + + N+++ + DV+
Sbjct: 31 LIRRLRRAEMAGQNVEIFKPKLDVRYSEEDVVSHNQNKIRSTAVENPNEILLLASNCDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +V A +AN+G VV+A LD F F + +L+ AE V K+ A+C
Sbjct: 91 GIDEAQFFDESIVDIANQLANSGIRVVIAGLDMDFLGRPFGPMPNLMATAEYVTKVHAIC 150
Query: 136 MSCFRDAAFTKRIGQEKEVI 155
A ++ RI Q ++
Sbjct: 151 KRTGNLANYSMRISQGDNLV 170
>gi|225012398|ref|ZP_03702834.1| Thymidine kinase [Flavobacteria bacterium MS024-2A]
gi|225003375|gb|EEG41349.1| Thymidine kinase [Flavobacteria bacterium MS024-2A]
Length = 196
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 85/180 (47%), Gaps = 47/180 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RYD E V++HDQ ++ + + V
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKIEIFKPAIDLRYDDELVTSHDQNQIPS-TPVP 75
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
IP D DV+GIDE QF + D+ + VC +
Sbjct: 76 AAANIPILADGCDVVGIDEAQFFD-----DEIVKVCND---------------------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD FQ F + +L+ AE V K+ A+C
Sbjct: 109 ------------------LANNGVRVIVAGLDMDFQGNPFGPMPALMATAEYVTKVHAIC 150
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR++R Q+A + I + A D RYD E V +HDQ ++ + + V IP D DV+G
Sbjct: 33 RRLKRAQFAKQKIEIFKPAIDLRYDDELVTSHDQNQIPS-TPVPAAANIPILADGCDVVG 91
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D +V +AN G V+VA LD FQ F + +L+ AE V K+ A+C
Sbjct: 92 IDEAQFFDDEIVKVCNDLANNGVRVIVAGLDMDFQGNPFGPMPALMATAEYVTKVHAICT 151
Query: 137 SCFRDAAFTKRIGQEKEVIL 156
A + R + ++L
Sbjct: 152 RTGGLANHSFRTSENNSIVL 171
>gi|373457025|ref|ZP_09548792.1| Thymidine kinase [Caldithrix abyssi DSM 13497]
gi|371718689|gb|EHO40460.1| Thymidine kinase [Caldithrix abyssi DSM 13497]
Length = 193
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R A + I + D RY T ++ +HD+QK+ ++
Sbjct: 13 EVICGSMFSGKTEELIRRLKRAMIARQKVAIFKPKVDTRYSTTEIVSHDKQKIKSIVVES 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ + V+GIDE QF + D + +C
Sbjct: 73 PQEILEKALEAQVVGIDEAQFFD-----DSLVNIC------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+ +AN GK V++A LD + F I L+ +AE + K A+C+
Sbjct: 103 ---------------QKLANMGKRVIIAGLDQDYLGKPFEPIPQLLAVAEYITKTHAICV 147
Query: 333 SCFRDAAFTKRIGQEKE 349
C A T R ++K+
Sbjct: 148 VCGNPANHTYRKTKQKD 164
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R A + I + D RY T ++ +HD+QK+ ++ +++ + V+GI
Sbjct: 29 RRLKRAMIARQKVAIFKPKVDTRYSTTEIVSHDKQKIKSIVVESPQEILEKALEAQVVGI 88
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ + +AN GK V++A LD + F I L+ +AE + K A+C+
Sbjct: 89 DEAQFFDDSLVNICQKLANMGKRVIIAGLDQDYLGKPFEPIPQLLAVAEYITKTHAICVV 148
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C A T R ++K+ VI+G
Sbjct: 149 CGNPANHTYRKTKQKDKVIVG 169
>gi|387928385|ref|ZP_10131063.1| thymidine kinase [Bacillus methanolicus PB1]
gi|387587971|gb|EIJ80293.1| thymidine kinase [Bacillus methanolicus PB1]
Length = 207
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR +A + + + D+RY E V +H+ TA
Sbjct: 11 EVICGSMFSGKSEELIRRVRRALFAKQKIAVFKPKIDNRYSDEAVVSHNGTSFTATPISH 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H D+DVI IDE QF +
Sbjct: 71 STEIFQHIDTDVDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+ + +AN+G V+ A LD F+ F ++ ++ +AE V KL AVC
Sbjct: 95 ---------KDIADVLQQLANSGYRVIAAGLDQDFRGEPFGEMPKIMAIAEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 AVCGSPASRTQRL 158
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDVIG 77
RR+RR +A + + + D+RY E V +H+ TA ++ H D+DVI
Sbjct: 27 RRVRRALFAKQKIAVFKPKIDNRYSDEAVVSHNGTSFTATPISHSTEIFQHIDTDVDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+ + +AN+G V+ A LD F+ F ++ ++ +AE V KL AVC
Sbjct: 87 IDEVQFFDKDIADVLQQLANSGYRVIAAGLDQDFRGEPFGEMPKIMAIAEQVTKLQAVCA 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|254838353|gb|ACT83387.1| thymidine kinase [Cyprinid herpesvirus 3]
Length = 117
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
D + +DEGQFFPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTA
Sbjct: 1 DAVAVDEGQFFPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTA 60
Query: 134 VCMSC-FRDAAFTKRIGQEKEVI 155
VCM C RDA FT RI Q +++
Sbjct: 61 VCMKCKMRDAPFTVRISQGTDLV 83
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDA 338
FPD+ + AGK V+VAALDG F + F + +L+P+A+ ++KLTAVCM C RDA
Sbjct: 11 FPDLYEGVVQLLTAGKYVIVAALDGDFMQQPFKQVTALVPMADKLDKLTAVCMKCKMRDA 70
Query: 339 AFTKRIGQEKEV 350
FT RI Q ++
Sbjct: 71 PFTVRISQGTDL 82
>gi|373955881|ref|ZP_09615841.1| Thymidine kinase [Mucilaginibacter paludis DSM 18603]
gi|373892481|gb|EHQ28378.1| Thymidine kinase [Mucilaginibacter paludis DSM 18603]
Length = 192
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 90/211 (42%), Gaps = 47/211 (22%)
Query: 136 MSCFRDAAFTKR--IGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD 193
M F + F +R G E+I G MFSGKT ELIRR+RR Q A I + D RYD
Sbjct: 1 MMLFSEDVFKRRSEFGGSVELICGSMFSGKTEELIRRLRRAQIARLNVEIFKPKTDTRYD 60
Query: 194 TEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQ 253
V +HD + + + ++ + V+GIDE QF + D+ +VC +
Sbjct: 61 ENAVVSHDLNSIQSTPVENSSSILLLGSNTQVVGIDEAQFFD-----DELPSVCNK---- 111
Query: 254 KAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFND 313
+AN G V+VA LD F F
Sbjct: 112 ------------------------------------LANKGIRVIVAGLDMDFLGKPFGP 135
Query: 314 ILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
+ +++ +AE V K+ AVC+ C A ++ R+
Sbjct: 136 MPAIMAIAESVTKVHAVCVRCGNPALYSYRL 166
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q A I + D RYD V +HD + + + ++ + V+GI
Sbjct: 36 RRLRRAQIARLNVEIFKPKTDTRYDENAVVSHDLNSIQSTPVENSSSILLLGSNTQVVGI 95
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D + S +AN G V+VA LD F F + +++ +AE V K+ AVC+
Sbjct: 96 DEAQFFDDELPSVCNKLANKGIRVIVAGLDMDFLGKPFGPMPAIMAIAESVTKVHAVCVR 155
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A ++ R + + +++LG
Sbjct: 156 CGNPALYSYRLVSSDAKILLG 176
>gi|365155866|ref|ZP_09352213.1| thymidine kinase [Bacillus smithii 7_3_47FAA]
gi|363627944|gb|EHL78772.1| thymidine kinase [Bacillus smithii 7_3_47FAA]
Length = 207
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK+ ELIRR+RR ++A ++ + D+RY E V +H+ A+ S
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAEFAKQNILVFKPKLDNRYSEEAVVSHNGISFEAIPVES 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ E+ +L+ T+DIDV+ IDE QF +
Sbjct: 71 SQEIVELV--TEDIDVVAIDETQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+V + +A+ G V+VA LD F+ F + +L+ AE V KL A
Sbjct: 95 -----------EGIVEAVKHLADRGHRVIVAGLDLDFRGEPFGPMPALMATAEMVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDI 73
RR+RR ++A ++ + D+RY E V +H+ A+ S+ E+ +L+ T+DI
Sbjct: 25 LIRRVRRAEFAKQNILVFKPKLDNRYSEEAVVSHNGISFEAIPVESSQEIVELV--TEDI 82
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ IDE QFF + +V + +A+ G V+VA LD F+ F + +L+ AE V KL
Sbjct: 83 DVVAIDETQFFDEGIVEAVKHLADRGHRVIVAGLDLDFRGEPFGPMPALMATAEMVTKLQ 142
Query: 133 AVCMSCFRDAAFTKRI 148
AVC C A+ T+R+
Sbjct: 143 AVCTVCGSPASRTQRL 158
>gi|149280617|ref|ZP_01886732.1| thymidine kinase [Pedobacter sp. BAL39]
gi|149228662|gb|EDM34066.1| thymidine kinase [Pedobacter sp. BAL39]
Length = 174
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q A + I + D RYD V +HD + + + ++ D++V+GI
Sbjct: 11 RRLKRAQIAKLKVEIFKPRTDTRYDENAVVSHDLNSIQSTPVDHSSTILLLAPDVEVVGI 70
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ ++AN G V+VA LD F F + +L+ +AE V K+ AVC+
Sbjct: 71 DEAQFFDENLPEVCNTLANKGIRVIVAGLDMDFMGKPFGPVPALMAIAELVTKVNAVCVC 130
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A ++ R + E++++LG
Sbjct: 131 CGAPAVYSYRTVADERKILLG 151
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 46/195 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT EL+RR++R Q A + I + D RYD V +HD + + + ++
Sbjct: 1 MFSGKTEELLRRLKRAQIAKLKVEIFKPRTDTRYDENAVVSHDLNSIQSTPVDHSSTILL 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
D++V+GIDE QF +EN
Sbjct: 61 LAPDVEVVGIDEAQFF--------------------------------DEN--------- 79
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
P+V + ++AN G V+VA LD F F + +L+ +AE V K+ AVC+ C A
Sbjct: 80 -LPEVCN---TLANKGIRVIVAGLDMDFMGKPFGPVPALMAIAELVTKVNAVCVCCGAPA 135
Query: 339 AFTKR-IGQEKEVRI 352
++ R + E+++ +
Sbjct: 136 VYSYRTVADERKILL 150
>gi|220932635|ref|YP_002509543.1| thymidine kinase [Halothermothrix orenii H 168]
gi|219993945|gb|ACL70548.1| Thymidine kinase [Halothermothrix orenii H 168]
Length = 198
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPM+ GK+ ELIRR+RR + A + + + D+RY + V +H+ +++ A+
Sbjct: 11 EVITGPMYCGKSEELIRRLRRVEIARQKAHVFKPVIDNRYSNKDVVSHNGERIEAIPVNH 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ K+ +V+GIDE QF +N
Sbjct: 71 PEEILQRIDKNTEVVGIDEVQF-------------------------------FSN---- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++S E +A+ GK V+VA LD F+ F + L+ AE V+KL A+C
Sbjct: 96 ----------GIISICEQLADEGKRVIVAGLDRDFRGEPFGPVPELLARAEYVDKLHAIC 145
Query: 332 MSCFRDAAFTKRI 344
+ C A+ T+R+
Sbjct: 146 VKCGELASRTQRL 158
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDVIG 77
RR+RR + A + + + D+RY + V +H+ +++ A+ +++ K+ +V+G
Sbjct: 27 RRLRRVEIARQKAHVFKPVIDNRYSNKDVVSHNGERIEAIPVNHPEEILQRIDKNTEVVG 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + ++S E +A+ GK V+VA LD F+ F + L+ AE V+KL A+C+
Sbjct: 87 IDEVQFFSNGIISICEQLADEGKRVIVAGLDRDFRGEPFGPVPELLARAEYVDKLHAICV 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 KCGELASRTQRL 158
>gi|260889955|ref|ZP_05901218.1| thymidine kinase [Leptotrichia hofstadii F0254]
gi|260860561|gb|EEX75061.1| thymidine kinase [Leptotrichia hofstadii F0254]
Length = 359
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA--VSA 210
EV+ G MFSGK+ ELIRR+RR +YA + + ++A D+RY E V +H A VS
Sbjct: 11 EVVTGSMFSGKSEELIRRLRRAEYAKQKIVAFKHAIDNRYGEEGVFSHGNDSFRAYPVSD 70
Query: 211 V-ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
V ++ +++ D +VIGIDE QF + +K
Sbjct: 71 VSQMEEIMEKNVDAEVIGIDEVQF-----------------FGEK--------------- 98
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
VV F + GK V+VA LD +F+ + + L+ +A+ V+KL A
Sbjct: 99 -------------VVEFCKKYVEYGKRVIVAGLDMSFRAEPYEPVPELMSIADQVDKLHA 145
Query: 330 VCMSCFRDAAFTKRI 344
+CM C + A ++R+
Sbjct: 146 ICMVCGKPAYASQRL 160
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA--VSAV-ELNKLIPHTKDI 73
RR+RR +YA + + ++A D+RY E V +H A VS V ++ +++ D
Sbjct: 25 LIRRLRRAEYAKQKIVAFKHAIDNRYGEEGVFSHGNDSFRAYPVSDVSQMEEIMEKNVDA 84
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+VIGIDE QFF + VV F + GK V+VA LD +F+ + + L+ +A+ V+KL
Sbjct: 85 EVIGIDEVQFFGEKVVEFCKKYVEYGKRVIVAGLDMSFRAEPYEPVPELMSIADQVDKLH 144
Query: 133 AVCMSCFRDAAFTKRI 148
A+CM C + A ++R+
Sbjct: 145 AICMVCGKPAYASQRL 160
>gi|332291954|ref|YP_004430563.1| thymidine kinase [Krokinobacter sp. 4H-3-7-5]
gi|332170040|gb|AEE19295.1| Thymidine kinase [Krokinobacter sp. 4H-3-7-5]
Length = 219
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 47/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RYD E V +HD ++ + + V
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDTRYDEEMVVSHDANEIRS-TPVP 75
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
IP D DV+GIDE QF + D+ + VC +
Sbjct: 76 AAANIPMLADGCDVVGIDEAQFFD-----DEIVQVCND---------------------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 ------------------LANRGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVC 150
Query: 332 MSCFRDAAFTKRIGQEKEV 350
A ++ R Q +++
Sbjct: 151 TRTGNLAQYSYRKAQSEDI 169
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-ID 74
RR++R Q+A + I + A D RYD E V +HD ++ + + V IP D D
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPAVDTRYDEEMVVSHDANEIRS-TPVPAAANIPMLADGCD 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF D +V +AN G V+VA LD F+ F + +L+ AE V K+ A
Sbjct: 89 VVGIDEAQFFDDEIVQVCNDLANRGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIV-RYAKDDRY 192
VC A ++ R Q +++++ G+T E + R Y Y+ M+ R K D
Sbjct: 149 VCTRTGNLAQYSYRKAQSEDIVM----LGETEEY-EPLSRAAY--YKAMLRDRLRKMDVE 201
Query: 193 DTEKVSTHDQQK 204
E+++T + ++
Sbjct: 202 TPEEITTSNARQ 213
>gi|384252555|gb|EIE26031.1| thymidine kinase [Coccomyxa subellipsoidea C-169]
Length = 179
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD----ID 74
RR+ +++ A + +V+ + D RY +V +HD +A L +L D +
Sbjct: 11 RRVEQHEAAGRKVAVVKSSVDTRYHATRVVSHDGNSKVCFAASSLGELRRQLGDKYLEYN 70
Query: 75 VIGIDEGQFFPDVVSFAESMANAG-KIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VI IDE QF PD++ F + A+ K +V+A LDG F+R F +L ++ +A+ V KL
Sbjct: 71 VIAIDEAQFLPDLLEFCTAAADLDHKHIVIAGLDGDFKRQRFGQVLDMVSVADSVTKLAG 130
Query: 134 VCMSCFRDAAFTKRI-GQEKEVILG 157
C C A F+ RI E++ ++G
Sbjct: 131 KCAYCSEQALFSLRIAADERQALVG 155
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 51/195 (26%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MF+GKT+EL+RR+ +++ A + +V+ + D RY +V +HD +A L +L
Sbjct: 1 MFAGKTSELLRRVEQHEAAGRKVAVVKSSVDTRYHATRVVSHDGNSKVCFAASSLGELRR 60
Query: 219 HTKD----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
D +VI IDE QF+
Sbjct: 61 QLGDKYLEYNVIAIDEAQFL---------------------------------------- 80
Query: 275 PPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
PD++ F + A+ K +V+A LDG F+R F +L ++ +A+ V KL C
Sbjct: 81 ------PDLLEFCTAAADLDHKHIVIAGLDGDFKRQRFGQVLDMVSVADSVTKLAGKCAY 134
Query: 334 CFRDAAFTKRIGQEK 348
C A F+ RI ++
Sbjct: 135 CSEQALFSLRIAADE 149
>gi|320335087|ref|YP_004171798.1| thymidine kinase [Deinococcus maricopensis DSM 21211]
gi|319756376|gb|ADV68133.1| Thymidine kinase [Deinococcus maricopensis DSM 21211]
Length = 203
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 90/207 (43%), Gaps = 56/207 (27%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI+GPMFSGK+ ELIRR+ R A R + + A DDRY V++H+ + + AV
Sbjct: 8 GGHLEVIVGPMFSGKSEELIRRVNRAVIARQRVAVFKPAIDDRYHATFVASHNGRTVEAV 67
Query: 209 SAVELNKLIPH--------TKDI---DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPI 257
+ + ++ H T D DV+G DE QF +
Sbjct: 68 AVRHTDDVLAHLTGQGTLLTADTALPDVVGFDEAQFFDA--------------------- 106
Query: 258 KRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSL 317
+V A +A+ G V++A LD F+ F + L
Sbjct: 107 ------------------------GLVPLALDLADHGVRVILAGLDLDFRAEPFGLMPDL 142
Query: 318 IPLAECVEKLTAVCMSCFRDAAFTKRI 344
+ AE VEKLTA+C+ C A T+R+
Sbjct: 143 VARAESVEKLTAICVVCGAPATRTQRL 169
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH------- 69
RR+ R A R + + A DDRY VA+H+ + + AV+ + ++ H
Sbjct: 26 LIRRVNRAVIARQRVAVFKPAIDDRYHATFVASHNGRTVEAVAVRHTDDVLAHLTGQGTL 85
Query: 70 -TKDI---DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPL 124
T D DV+G DE QFF +V A +A+ G V++A LD F+ F + L+
Sbjct: 86 LTADTALPDVVGFDEAQFFDAGLVPLALDLADHGVRVILAGLDLDFRAEPFGLMPDLVAR 145
Query: 125 AECVEKLTAVCMSCFRDAAFTKRI 148
AE VEKLTA+C+ C A T+R+
Sbjct: 146 AESVEKLTAICVVCGAPATRTQRL 169
>gi|163754460|ref|ZP_02161582.1| phenylalanyl-tRNA synthetase alpha subunit [Kordia algicida OT-1]
gi|161325401|gb|EDP96728.1| phenylalanyl-tRNA synthetase alpha subunit [Kordia algicida OT-1]
Length = 214
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 89/193 (46%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + A D RYD EKV +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDIRYDDEKVVSHDANEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ + DV+GIDE QF + D +AVC +
Sbjct: 77 AANIRLL--ADNCDVVGIDEAQFFD-----DGIVAVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANKGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLAQYSFR 162
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R Q+A + I + A D RYD EKV +HD ++ T V A +L+ +
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPAVDIRYDDEKVVSHDANEIRSTPVPAAANIRLL--ADNC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+
Sbjct: 88 DVVGIDEAQFFDDGIVAVCNDLANKGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY 192
AVC A ++ R + +++L G+T E + R Y Y+ M+ K+
Sbjct: 148 AVCTRTGNLAQYSFRKSKSDDLVL----LGETDEY-EPLSRGAY--YKAMLKESVKEIEV 200
Query: 193 D 193
D
Sbjct: 201 D 201
>gi|170761483|ref|YP_001785465.1| thymidine kinase [Clostridium botulinum A3 str. Loch Maree]
gi|238688739|sp|B1KSQ8.1|KITH_CLOBM RecName: Full=Thymidine kinase
gi|169408472|gb|ACA56883.1| thymidine kinase [Clostridium botulinum A3 str. Loch Maree]
Length = 191
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 89/197 (45%), Gaps = 54/197 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EV+ GPM+SGKT ELIRRIRR + A + + + D+RY + V +H K+ +V S
Sbjct: 11 EVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVRS 70
Query: 210 AVE-LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ E L KL+ D DVIGIDE QF
Sbjct: 71 SKEILEKLL---DDTDVIGIDEAQF----------------------------------- 92
Query: 269 NAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D +V +AN + V+ A LD F+ F + L+ +AE V+K+
Sbjct: 93 -----------FDDSLVEIVSKIANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDKI 141
Query: 328 TAVCMSCFRDAAFTKRI 344
AVCM C A T+R+
Sbjct: 142 QAVCMVCNNPATRTQRL 158
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVE-LNKLIPHTK 71
RRIRR + A + + + D+RY + V +H K+ +V S+ E L KL+
Sbjct: 24 ELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVRSSKEILEKLL---D 80
Query: 72 DIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
D DVIGIDE QFF D +V +AN + V+ A LD F+ F + L+ +AE V+K
Sbjct: 81 DTDVIGIDEAQFFDDSLVEIVSKIANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDK 140
Query: 131 LTAVCMSCFRDAAFTKRI 148
+ AVCM C A T+R+
Sbjct: 141 IQAVCMVCNNPATRTQRL 158
>gi|340352924|ref|ZP_08675757.1| thymidine kinase [Prevotella pallens ATCC 700821]
gi|339611944|gb|EGQ16760.1| thymidine kinase [Prevotella pallens ATCC 700821]
Length = 199
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR ++A + I + A D RY E+V +HD+ + +
Sbjct: 18 EVICGSMFSGKTEELIRRLRRAKFAKQKVEIFKPAIDVRYSEEEVVSHDKNAIHSTPINS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +AN G V+VA LD ++ F I +L +A+ V K+ A+C+
Sbjct: 101 --------EGLVDICNQLANNGVRVIVAGLDMDYKGIPFGPIPALCAIADQVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYVSHRL 164
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR ++A + I + A D RY E+V +HD+ + + ++ DIDV+GI
Sbjct: 34 RRLRRAKFAKQKVEIFKPAIDVRYSEEEVVSHDKNAIHSTPINSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V+VA LD ++ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLVDICNQLANNGVRVIVAGLDMDYKGIPFGPIPALCAIADQVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + E V+LG
Sbjct: 154 CGALAYVSHRLVPNEHRVMLG 174
>gi|212640541|ref|YP_002317061.1| thymidine kinase [Anoxybacillus flavithermus WK1]
gi|226729733|sp|B7GMH4.1|KITH_ANOFW RecName: Full=Thymidine kinase
gi|212562021|gb|ACJ35076.1| Thymidine kinase [Anoxybacillus flavithermus WK1]
Length = 206
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
EVI G MFSGK+ ELIRR+RR Q+A + + A D+RY E V +H+ + A+
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAQFAKQEVKVFKPAIDNRYSEEAVVSHNGTSVIAIPVSC 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A ++ K I T DV+ IDE QF D++
Sbjct: 71 ASDIRKHI--TTHTDVVAIDEVQFF------DEH-------------------------- 96
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
VV + +A+ G V+VA LD F+ F + +L+ +AE V KL A
Sbjct: 97 -------------VVDVVQQLADEGYRVIVAGLDQDFRGEPFGPVPTLMSIAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDIDV 75
RR+RR Q+A + + A D+RY E V +H+ + A+ A ++ K I T DV
Sbjct: 27 RRVRRAQFAKQEVKVFKPAIDNRYSEEAVVSHNGTSVIAIPVSCASDIRKHI--TTHTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF + VV + +A+ G V+VA LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEVQFFDEHVVDVVQQLADEGYRVIVAGLDQDFRGEPFGPVPTLMSIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|433447674|ref|ZP_20411114.1| thymidine kinase [Anoxybacillus flavithermus TNO-09.006]
gi|431999811|gb|ELK20723.1| thymidine kinase [Anoxybacillus flavithermus TNO-09.006]
Length = 206
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
EVI G MFSGK+ ELIRR+RR Q+A + + A D+RY E V +H+ + A+
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAQFAKQEVKVFKPAIDNRYSEEAVVSHNGTSVIAIPVSC 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A+++ K I T DV+ IDE QF +
Sbjct: 71 ALDIRKHI--TAHTDVVAIDEVQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
VV + +A+ G V+VA LD F+ F + +L+ +AE V KL A
Sbjct: 95 -----------ERVVDVVQQLADEGYRVIVAGLDQDFRGEPFGPVPTLMSIAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDIDV 75
RR+RR Q+A + + A D+RY E V +H+ + A+ A+++ K I T DV
Sbjct: 27 RRVRRAQFAKQEVKVFKPAIDNRYSEEAVVSHNGTSVIAIPVSCALDIRKHI--TAHTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF + VV + +A+ G V+VA LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEVQFFDERVVDVVQQLADEGYRVIVAGLDQDFRGEPFGPVPTLMSIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|387133161|ref|YP_006299133.1| thymidine kinase [Prevotella intermedia 17]
gi|386376009|gb|AFJ09696.1| thymidine kinase [Prevotella intermedia 17]
Length = 202
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RY E V +HDQ + +
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPAIDMRYSEEDVVSHDQNAIRSTPINS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DI+V+GIDE QF++
Sbjct: 78 SGNILLLASDIEVVGIDEAQFLD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +AN G V+VA LD F+ F I SL +A+ V K+ A+C+
Sbjct: 101 --------EGLVDICNQLANNGVRVIVAGLDMDFKGVPFGPIPSLCAVADQVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYASHRL 164
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY E V +HDQ + + ++ DI+V+GI
Sbjct: 34 RRMKRAKFAKQKVEIFKPAIDMRYSEEDVVSHDQNAIRSTPINSSGNILLLASDIEVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V+VA LD F+ F I SL +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLVDICNQLANNGVRVIVAGLDMDFKGVPFGPIPSLCAVADQVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + + V+LG
Sbjct: 154 CGALAYASHRLVDNDHRVMLG 174
>gi|381210931|ref|ZP_09918002.1| thymidine kinase [Lentibacillus sp. Grbi]
Length = 207
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 83/194 (42%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Y N + + DDRY E V +H+ + A
Sbjct: 11 EVICGSMFSGKSEELIRRVRRATYGNLSVRVFKPVIDDRYSDESVVSHNGTSIIARPVKN 70
Query: 213 LNKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
K++ + + IDVIGIDE QF +
Sbjct: 71 SEKILEYIEHNHIDVIGIDEVQFFD----------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
++VS A +AN G V+ A LD F+ F + ++ +E + KL A+
Sbjct: 96 ----------DNIVSVANELANRGVRVIAAGLDTDFRGEPFGPMPDMMAQSESISKLNAI 145
Query: 331 CMSCFRDAAFTKRI 344
C C A T+R+
Sbjct: 146 CPVCGSPANRTQRL 159
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--ID 74
RR+RR Y N + + DDRY E V +H+ + A K++ + + ID
Sbjct: 25 LIRRVRRATYGNLSVRVFKPVIDDRYSDESVVSHNGTSIIARPVKNSEKILEYIEHNHID 84
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D +VS A +AN G V+ A LD F+ F + ++ +E + KL A
Sbjct: 85 VIGIDEVQFFDDNIVSVANELANRGVRVIAAGLDTDFRGEPFGPMPDMMAQSESISKLNA 144
Query: 134 VCMSCFRDAAFTKRI 148
+C C A T+R+
Sbjct: 145 ICPVCGSPANRTQRL 159
>gi|424828078|ref|ZP_18252819.1| thymidine kinase [Clostridium sporogenes PA 3679]
gi|365979561|gb|EHN15614.1| thymidine kinase [Clostridium sporogenes PA 3679]
Length = 191
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 89/197 (45%), Gaps = 54/197 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EV+ GPM+SGKT ELIRRIRR + A + + + D+RY + V +H K+ +V S
Sbjct: 11 EVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVKS 70
Query: 210 AVE-LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ E L KL+ D DVIGIDE QF
Sbjct: 71 SKEILEKLL---DDTDVIGIDEAQF----------------------------------- 92
Query: 269 NAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D +V +AN + V+ A LD F+ F + L+ +AE V+K+
Sbjct: 93 -----------FDDSLVEIVSKIANNNRRVICAGLDMDFKGEPFGPMPELMAIAEFVDKI 141
Query: 328 TAVCMSCFRDAAFTKRI 344
AVCM C A T+R+
Sbjct: 142 QAVCMVCNNPATRTQRL 158
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 8/135 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVE-LNKLIPHTKDID 74
RRIRR + A + + + D+RY + V +H K+ +V S+ E L KL+ D D
Sbjct: 27 RRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVKSSKEILEKLL---DDTD 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D +V +AN + V+ A LD F+ F + L+ +AE V+K+ A
Sbjct: 84 VIGIDEAQFFDDSLVEIVSKIANNNRRVICAGLDMDFKGEPFGPMPELMAIAEFVDKIQA 143
Query: 134 VCMSCFRDAAFTKRI 148
VCM C A T+R+
Sbjct: 144 VCMVCNNPATRTQRL 158
>gi|168177468|ref|ZP_02612132.1| thymidine kinase [Clostridium botulinum NCTC 2916]
gi|168182255|ref|ZP_02616919.1| thymidine kinase [Clostridium botulinum Bf]
gi|187777273|ref|ZP_02993746.1| hypothetical protein CLOSPO_00825 [Clostridium sporogenes ATCC
15579]
gi|226947359|ref|YP_002802450.1| thymidine kinase [Clostridium botulinum A2 str. Kyoto]
gi|237793454|ref|YP_002861006.1| thymidine kinase [Clostridium botulinum Ba4 str. 657]
gi|254807842|sp|C1FQ94.1|KITH_CLOBJ RecName: Full=Thymidine kinase
gi|259494451|sp|C3KYH2.1|KITH_CLOB6 RecName: Full=Thymidine kinase
gi|182670652|gb|EDT82626.1| thymidine kinase [Clostridium botulinum NCTC 2916]
gi|182674483|gb|EDT86444.1| thymidine kinase [Clostridium botulinum Bf]
gi|187774201|gb|EDU38003.1| thymidine kinase [Clostridium sporogenes ATCC 15579]
gi|226842763|gb|ACO85429.1| thymidine kinase [Clostridium botulinum A2 str. Kyoto]
gi|229263838|gb|ACQ54871.1| thymidine kinase [Clostridium botulinum Ba4 str. 657]
Length = 191
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 89/197 (45%), Gaps = 54/197 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EV+ GPM+SGKT ELIRRIRR + A + + + D+RY + V +H K+ +V S
Sbjct: 11 EVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVKS 70
Query: 210 AVE-LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ E L KL+ D DVIGIDE QF
Sbjct: 71 SKEILEKLL---DDTDVIGIDEAQF----------------------------------- 92
Query: 269 NAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
F D +V +AN + V+ A LD F+ F + L+ +AE V+K+
Sbjct: 93 -----------FDDSLVEIVSKIANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDKI 141
Query: 328 TAVCMSCFRDAAFTKRI 344
AVCM C A T+R+
Sbjct: 142 QAVCMVCNNPATRTQRL 158
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 8/135 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVE-LNKLIPHTKDID 74
RRIRR + A + + + D+RY + V +H K+ +V S+ E L KL+ D D
Sbjct: 27 RRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVKSSKEILEKLL---DDTD 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D +V +AN + V+ A LD F+ F + L+ +AE V+K+ A
Sbjct: 84 VIGIDEAQFFDDSLVEIVSKIANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDKIQA 143
Query: 134 VCMSCFRDAAFTKRI 148
VCM C A T+R+
Sbjct: 144 VCMVCNNPATRTQRL 158
>gi|288802985|ref|ZP_06408421.1| thymidine kinase [Prevotella melaninogenica D18]
gi|288334502|gb|EFC72941.1| thymidine kinase [Prevotella melaninogenica D18]
Length = 199
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + + D RY E V +HDQ + +
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPSIDTRYSDEDVVSHDQNSIHSTPIDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+ +AN G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 101 --------EGLTDICNKLANNGVRVIVAGLDMDFKGVPFGPIPALCAIADEVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYVSHRL 164
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + + D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 34 RRMKRAKFAKQRVEIFKPSIDTRYSDEDVVSHDQNSIHSTPIDSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + + +AN G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLTDICNKLANNGVRVIVAGLDMDFKGVPFGPIPALCAIADEVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R I ++ V+LG
Sbjct: 154 CGALAYVSHRLIADDRRVMLG 174
>gi|313844169|ref|YP_004061832.1| hypothetical protein OlV1_200c [Ostreococcus lucimarinus virus
OlV1]
gi|312599554|gb|ADQ91576.1| hypothetical protein OlV1_200c [Ostreococcus lucimarinus virus
OlV1]
Length = 219
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 50/213 (23%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
F +++ +I+G MFSGKT+ELIRR++RY+ + +++ AKD R E + THD
Sbjct: 11 FKRKVRMGLTIIMGNMFSGKTSELIRRLKRYKVIGKKIVVINSAKDTRSPEEVLKTHDGV 70
Query: 204 KLTAVSAVELNKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSP 261
+ + ++ I + D++ IDE QF
Sbjct: 71 EFPCLKVEHISHCIIKESFCNADIVAIDEAQF---------------------------- 102
Query: 262 FKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLA 321
F ++ F + K V++A LDG +++ F +++ IPLA
Sbjct: 103 ------------------FSNLQEFVQMCLFLKKSVIMAGLDGDYKQRKFGEVIDCIPLA 144
Query: 322 ECVEKLTAVCMSCFRD--AAFTKRIGQEKEVRI 352
V KL+A+CM C FTKRI Q ++ +
Sbjct: 145 SDVVKLSALCMDCKNGTPGPFTKRIVQSDKLEL 177
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DIDVI 76
RR++RY+ + +++ AKD R E + THD + + ++ I + D++
Sbjct: 36 RRLKRYKVIGKKIVVINSAKDTRSPEEVLKTHDGVEFPCLKVEHISHCIIKESFCNADIV 95
Query: 77 GIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++ F + K V++A LDG +++ F +++ IPLA V KL+A+CM
Sbjct: 96 AIDEAQFFSNLQEFVQMCLFLKKSVIMAGLDGDYKQRKFGEVIDCIPLASDVVKLSALCM 155
Query: 137 SCFRD--AAFTKRIGQEKEVIL 156
C FTKRI Q ++ L
Sbjct: 156 DCKNGTPGPFTKRIVQSDKLEL 177
>gi|148378142|ref|YP_001252683.1| thymidine kinase [Clostridium botulinum A str. ATCC 3502]
gi|153931851|ref|YP_001382543.1| thymidine kinase [Clostridium botulinum A str. ATCC 19397]
gi|153936545|ref|YP_001386095.1| thymidine kinase [Clostridium botulinum A str. Hall]
gi|153940504|ref|YP_001389499.1| thymidine kinase [Clostridium botulinum F str. Langeland]
gi|170755962|ref|YP_001779763.1| thymidine kinase [Clostridium botulinum B1 str. Okra]
gi|384460583|ref|YP_005673178.1| thymidine kinase [Clostridium botulinum F str. 230613]
gi|387816365|ref|YP_005676709.1| thymidine kinase [Clostridium botulinum H04402 065]
gi|429247089|ref|ZP_19210365.1| thymidine kinase [Clostridium botulinum CFSAN001628]
gi|166220762|sp|A7FQF9.1|KITH_CLOB1 RecName: Full=Thymidine kinase
gi|166220763|sp|A5HY32.1|KITH_CLOBH RecName: Full=Thymidine kinase
gi|166220764|sp|A7G9N9.1|KITH_CLOBL RecName: Full=Thymidine kinase
gi|229486314|sp|B1IE18.1|KITH_CLOBK RecName: Full=Thymidine kinase
gi|148287626|emb|CAL81691.1| thymidine kinase [Clostridium botulinum A str. ATCC 3502]
gi|152927895|gb|ABS33395.1| thymidine kinase [Clostridium botulinum A str. ATCC 19397]
gi|152932459|gb|ABS37958.1| thymidine kinase [Clostridium botulinum A str. Hall]
gi|152936400|gb|ABS41898.1| thymidine kinase [Clostridium botulinum F str. Langeland]
gi|169121174|gb|ACA45010.1| thymidine kinase [Clostridium botulinum B1 str. Okra]
gi|295317600|gb|ADF97977.1| thymidine kinase [Clostridium botulinum F str. 230613]
gi|322804406|emb|CBZ01956.1| thymidine kinase [Clostridium botulinum H04402 065]
gi|428755942|gb|EKX78537.1| thymidine kinase [Clostridium botulinum CFSAN001628]
Length = 191
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 89/196 (45%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EV+ GPM+SGKT ELIRRIRR + A + + + D+RY + V +H K+ +V S
Sbjct: 11 EVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVKS 70
Query: 210 AVE-LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ E L KL+ D DVIGIDE QF D ++
Sbjct: 71 SKEILEKLL---DDTDVIGIDEAQFF------DDFL------------------------ 97
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
V +AN + V+ A LD F+ F + L+ +AE V+K+
Sbjct: 98 ---------------VEIVSKIANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDKIQ 142
Query: 329 AVCMSCFRDAAFTKRI 344
AVCM C A T+R+
Sbjct: 143 AVCMVCNNPATRTQRL 158
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 8/138 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVE-LNKLIPHTK 71
RRIRR + A + + + D+RY + V +H K+ +V S+ E L KL+
Sbjct: 24 ELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVKSSKEILEKLL---D 80
Query: 72 DIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
D DVIGIDE QFF D +V +AN + V+ A LD F+ F + L+ +AE V+K
Sbjct: 81 DTDVIGIDEAQFFDDFLVEIVSKIANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDK 140
Query: 131 LTAVCMSCFRDAAFTKRI 148
+ AVCM C A T+R+
Sbjct: 141 IQAVCMVCNNPATRTQRL 158
>gi|255038142|ref|YP_003088763.1| thymidine kinase [Dyadobacter fermentans DSM 18053]
gi|254950898|gb|ACT95598.1| Thymidine kinase [Dyadobacter fermentans DSM 18053]
Length = 201
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIR + R + A R I + A D RY E + +H+ + ++
Sbjct: 20 EVICGSMFSGKTEELIRLLNRARIARQRIQIFKPALDKRYHEENIVSHNDNSIPSIPVQS 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ +D +V+GIDE QF + + +AVC
Sbjct: 80 SQQISDLAQDCEVVGIDEAQFFD-----EGILAVC------------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+ +AN+GK V+VA LD + F + L+ +AE V K+ AVCM
Sbjct: 110 ---------------DQLANSGKRVIVAGLDMDYMGKPFGCMPQLMAIAEYVTKVHAVCM 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A+ + R+ E
Sbjct: 155 VCGEVASHSYRLSPSNE 171
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
R + R + A R I + A D RY E + +H+ + ++ ++ +D +V+GI
Sbjct: 36 RLLNRARIARQRIQIFKPALDKRYHEENIVSHNDNSIPSIPVQSSQQISDLAQDCEVVGI 95
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +++ + +AN+GK V+VA LD + F + L+ +AE V K+ AVCM
Sbjct: 96 DEAQFFDEGILAVCDQLANSGKRVIVAGLDMDYMGKPFGCMPQLMAIAEYVTKVHAVCMV 155
Query: 138 CFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRR 173
C A+ + R+ E +L G+T R RR
Sbjct: 156 CGEVASHSYRLSPSNERVL----LGETDHYEARCRR 187
>gi|311748756|ref|ZP_07722541.1| thymidine kinase [Algoriphagus sp. PR1]
gi|126577290|gb|EAZ81538.1| thymidine kinase [Algoriphagus sp. PR1]
Length = 197
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 45/196 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R + A + I + A D RY V +HD+ + +
Sbjct: 20 EVICGSMFSGKTEELIRRLNRAKIARQKVEIFKPAVDKRYSDSDVVSHDETMIRSTPVDF 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + D DVIGIDE QF +
Sbjct: 80 AGDILLLSGDCDVIGIDEVQFFD------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++++ + ++ GK +++A LD F+ F + SL+ +AE V K+ A+CM
Sbjct: 103 --------EEIITVVQKLSRQGKRIILAGLDMDFEGRPFEPMPSLMAIAEFVTKVHAICM 154
Query: 333 SCFRDAAFTKRIGQEK 348
C AAF+ R+ K
Sbjct: 155 KCGDLAAFSFRLSDSK 170
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R + A + I + A D RY V +HD+ + + ++ + D DVIGI
Sbjct: 36 RRLNRAKIARQKVEIFKPAVDKRYSDSDVVSHDETMIRSTPVDFAGDILLLSGDCDVIGI 95
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++++ + ++ GK +++A LD F+ F + SL+ +AE V K+ A+CM
Sbjct: 96 DEVQFFDEEIITVVQKLSRQGKRIILAGLDMDFEGRPFEPMPSLMAIAEFVTKVHAICMK 155
Query: 138 CFRDAAFTKRIGQEK-EVILG 157
C AAF+ R+ K +V+LG
Sbjct: 156 CGDLAAFSFRLSDSKMKVMLG 176
>gi|312112643|ref|YP_003990959.1| thymidine kinase [Geobacillus sp. Y4.1MC1]
gi|336237105|ref|YP_004589721.1| thymidine kinase [Geobacillus thermoglucosidasius C56-YS93]
gi|423721602|ref|ZP_17695784.1| thymidine kinase [Geobacillus thermoglucosidans TNO-09.020]
gi|311217744|gb|ADP76348.1| Thymidine kinase [Geobacillus sp. Y4.1MC1]
gi|335363960|gb|AEH49640.1| Thymidine kinase [Geobacillus thermoglucosidasius C56-YS93]
gi|383365405|gb|EID42701.1| thymidine kinase [Geobacillus thermoglucosidans TNO-09.020]
Length = 205
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR +A + + D+RY E V +H+ + A+
Sbjct: 11 EVICGSMFSGKSEELIRRVRRATFAKQDVKVFKPTIDNRYSEEAVVSHNGNSVIAIPVSS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI IDE QF SD
Sbjct: 71 PQEIFEHISEKTDVIAIDEVQFF-----SD------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ +++A+ G V+VA LD F+ F + +L+ +AE V KL AVC
Sbjct: 96 ----------DIIEVVQTLADRGYRVIVAGLDQDFRGEPFGPVPTLMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 TVCGSPASRTQRL 158
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR +A + + D+RY E V +H+ + A+ ++ H ++ DVI
Sbjct: 27 RRVRRATFAKQDVKVFKPTIDNRYSEEAVVSHNGNSVIAIPVSSPQEIFEHISEKTDVIA 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D ++ +++A+ G V+VA LD F+ F + +L+ +AE V KL AVC
Sbjct: 87 IDEVQFFSDDIIEVVQTLADRGYRVIVAGLDQDFRGEPFGPVPTLMAIAESVTKLQAVCT 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|383449582|ref|YP_005356303.1| thymidine kinase [Flavobacterium indicum GPTSA100-9]
gi|380501204|emb|CCG52246.1| Thymidine kinase [Flavobacterium indicum GPTSA100-9]
Length = 197
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 91/193 (47%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + A D RY E V +H++ ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYHEEMVVSHNKNEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
E +++ + DVIGIDE QF + D+ +AVC +
Sbjct: 77 AENIRIL--AQGCDVIGIDEAQFFD-----DEIVAVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN+G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKR 343
C A F+ R
Sbjct: 150 CTRTGNLAHFSYR 162
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDIDVI 76
RR++R Q+A + I + A D RY E V +H++ ++ T V A E +++ + DVI
Sbjct: 33 RRLKRAQFAKQKVEIFKPAIDTRYHEEMVVSHNKNEIRSTPVPAAENIRIL--AQGCDVI 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF D +V+ +AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 91 GIDEAQFFDDEIVAVCNDLANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVC 150
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
A F+ R + ++L
Sbjct: 151 TRTGNLAHFSYRKATSENLVL 171
>gi|393786583|ref|ZP_10374719.1| thymidine kinase [Bacteroides nordii CL02T12C05]
gi|392660212|gb|EIY53829.1| thymidine kinase [Bacteroides nordii CL02T12C05]
Length = 199
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 47/209 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T+R G+ EVI G MFSGKT ELIRR++R ++A R I + + D RY V +HD
Sbjct: 12 TRRRGR-IEVICGSMFSGKTEELIRRLKRAKFARQRVEIFKPSIDVRYSEADVVSHDSNA 70
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+++ ++ T +IDV+GIDE QF + + VC +
Sbjct: 71 ISSTPIDSSASILLFTSEIDVVGIDEAQFFD-----SSLIDVCNQ--------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
+AN G V++A LD F+ F + L +A+ V
Sbjct: 111 -------------------------LANNGIRVIIAGLDMDFKGNPFGPMPGLCAIADEV 145
Query: 325 EKLTAVCMSCFRDAAFTKR-IGQEKEVRI 352
K+ A+C+ C + A+F+ R + +K+V +
Sbjct: 146 SKVHAICVKCGQLASFSHRTVKNDKQVML 174
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + + D RY V +HD +++ ++ T +IDV+GI
Sbjct: 35 RRLKRAKFARQRVEIFKPSIDVRYSEADVVSHDSNAISSTPIDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ +AN G V++A LD F+ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDSSLIDVCNQLANNGIRVIIAGLDMDFKGNPFGPMPGLCAIADEVSKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A+F+ R + +K+V+LG
Sbjct: 155 CGQLASFSHRTVKNDKQVMLG 175
>gi|262037995|ref|ZP_06011407.1| cytosolic thymidine kinase [Leptotrichia goodfellowii F0264]
gi|261747948|gb|EEY35375.1| cytosolic thymidine kinase [Leptotrichia goodfellowii F0264]
Length = 361
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EV+ G MFSGK+ ELIRR+RR +YA + ++ ++A D+RY + + +H L A S
Sbjct: 13 EVVTGSMFSGKSEELIRRLRRAKYAKQKVIVFKHAIDNRYGEKGIFSHGNDSLEAYPASS 72
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
++ +++ D +VIGIDE QF G S
Sbjct: 73 TEQMEEIMVKNNDAEVIGIDEVQF---FGQS----------------------------- 100
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
VV F + GK V+VA LD +F+ ++ + L+ +A+ V+KL A
Sbjct: 101 -------------VVDFCKKYVEYGKRVIVAGLDMSFRAEPYHPMPELMGIADQVDKLHA 147
Query: 330 VCMSCFRDAAFTKRI 344
+C C + A ++R+
Sbjct: 148 ICTVCGKPAYASQRL 162
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDI 73
RR+RR +YA + ++ ++A D+RY + + +H L A S ++ +++ D
Sbjct: 27 LIRRLRRAKYAKQKVIVFKHAIDNRYGEKGIFSHGNDSLEAYPASSTEQMEEIMVKNNDA 86
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+VIGIDE QFF VV F + GK V+VA LD +F+ ++ + L+ +A+ V+KL
Sbjct: 87 EVIGIDEVQFFGQSVVDFCKKYVEYGKRVIVAGLDMSFRAEPYHPMPELMGIADQVDKLH 146
Query: 133 AVCMSCFRDAAFTKR-IGQEKEVILGPM-FSGKTTELIRRIRRYQYANYR 180
A+C C + A ++R I E P+ G + R RR+ YR
Sbjct: 147 AICTVCGKPAYASQRLIDGEPAYYDDPLVMVGASENYEARCRRHHIVKYR 196
>gi|421836833|ref|ZP_16271192.1| thymidine kinase [Clostridium botulinum CFSAN001627]
gi|409741183|gb|EKN41119.1| thymidine kinase [Clostridium botulinum CFSAN001627]
Length = 191
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---- 208
EV+ GPM+SGKT ELIRRIRR + A + + + D+RY + V +H K+ +V
Sbjct: 11 EVVAGPMYSGKTEELIRRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVKS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
S L KL+ D DVIGIDE QF D ++
Sbjct: 71 SKEILEKLL---DDTDVIGIDEAQFF------DDFL------------------------ 97
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
V +AN + V+ A LD F+ F + L+ +AE V+K+
Sbjct: 98 ---------------VEIVSKIANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDKIQ 142
Query: 329 AVCMSCFRDAAFTKRI 344
AVCM C A T+R+
Sbjct: 143 AVCMVCNNPATRTQRL 158
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKDID 74
RRIRR + A + + + D+RY + V +H K+ +V S L KL+ D D
Sbjct: 27 RRIRRAEIAKQKVQVFKPEIDNRYSKQDVVSHAGDKIQSVPVKSSKEILEKLL---DDTD 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D +V +AN + V+ A LD F+ F + L+ +AE V+K+ A
Sbjct: 84 VIGIDEAQFFDDFLVEIVSKIANNNRRVICAGLDMDFKGEPFGPMPKLMAIAEFVDKIQA 143
Query: 134 VCMSCFRDAAFTKRI 148
VCM C A T+R+
Sbjct: 144 VCMVCNNPATRTQRL 158
>gi|302345185|ref|YP_003813538.1| thymidine kinase [Prevotella melaninogenica ATCC 25845]
gi|302150082|gb|ADK96344.1| thymidine kinase [Prevotella melaninogenica ATCC 25845]
Length = 199
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + + D RY E V +HDQ + +
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPSIDTRYSDEDVVSHDQNSIHSTPIDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+ +AN G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 101 --------EGLTDICNKLANNGVRVIVAGLDMDFKGIPFGPIPALCAIADEVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYVSHRL 164
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + + D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 34 RRMKRAKFAKQRVEIFKPSIDTRYSDEDVVSHDQNSIHSTPIDSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + + +AN G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLTDICNKLANNGVRVIVAGLDMDFKGIPFGPIPALCAIADEVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R I ++ V+LG
Sbjct: 154 CGALAYVSHRLIADDRRVMLG 174
>gi|444915123|ref|ZP_21235260.1| Thymidine kinase [Cystobacter fuscus DSM 2262]
gi|444713863|gb|ELW54753.1| Thymidine kinase [Cystobacter fuscus DSM 2262]
Length = 200
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Y + + D+RYD +V +H Q KLT+V+
Sbjct: 12 EVICGSMFSGKTEELIRRVKRAVYGKQTVQVFKPKLDNRYDETQVVSHSQLKLTSVAIER 71
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H + V+GIDE QF GS
Sbjct: 72 AEEIFHHLSPRTQVVGIDEVQFF----GS------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+VV+ E++A+ G V+VA LD +Q F + L+ +AE V K A+C
Sbjct: 97 ----------EVVAVCEALAHRGLRVIVAGLDQDYQGRPFEPMPQLLAVAEYVTKQLAIC 146
Query: 332 MSCFRDAAFTKRI 344
+ C A ++R+
Sbjct: 147 VVCGNPAHRSQRL 159
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR++R Y + + D+RYD +V +H Q KLT+V+ ++ H + V+G
Sbjct: 28 RRVKRAVYGKQTVQVFKPKLDNRYDETQVVSHSQLKLTSVAIERAEEIFHHLSPRTQVVG 87
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF +VV+ E++A+ G V+VA LD +Q F + L+ +AE V K A+C+
Sbjct: 88 IDEVQFFGSEVVAVCEALAHRGLRVIVAGLDQDYQGRPFEPMPQLLAVAEYVTKQLAICV 147
Query: 137 SCFRDAAFTKRIGQEKE-VILG 157
C A ++R+ E V++G
Sbjct: 148 VCGNPAHRSQRLVDRGERVVVG 169
>gi|15828616|ref|NP_325976.1| thymidine kinase [Mycoplasma pulmonis UAB CTIP]
gi|14089558|emb|CAC13318.1| THYMIDINE KINASE [Mycoplasma pulmonis]
Length = 190
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 47/202 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSA 210
EVI GPMFSGKT EL+RR R YA + ++++ A D R+ E++ + + K +V
Sbjct: 11 EVITGPMFSGKTEELLRRFRLLNYAKAKTLLIKPAFDTRFSKEEIISRAGVKTKTHSVKN 70
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
E + I + D + IDE F +
Sbjct: 71 TEQIRKILEKEKFDALVIDEIHFFDF---------------------------------- 96
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
D+V E +AN+G ++V+ LD F+R F + L+ +AE V KL A+
Sbjct: 97 -----------DIVYLIEELANSGYHIIVSGLDQNFKREPFEVVSYLLSIAEKVTKLQAI 145
Query: 331 CMSCFRDAAFTKRIGQEKEVRI 352
C+ C R A T R + KE+++
Sbjct: 146 CVKCQRAATTTFRKVESKEIKL 167
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD--QQKLTAVSAVELNKLIPHTKDIDVI 76
RR R YA + ++++ A D R+ E++ + + K +V E + I + D +
Sbjct: 27 RRFRLLNYAKAKTLLIKPAFDTRFSKEEIISRAGVKTKTHSVKNTEQIRKILEKEKFDAL 86
Query: 77 GIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IDE FF D+V E +AN+G ++V+ LD F+R F + L+ +AE V KL A+C
Sbjct: 87 VIDEIHFFDFDIVYLIEELANSGYHIIVSGLDQNFKREPFEVVSYLLSIAEKVTKLQAIC 146
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
+ C R A T R + KE+ L
Sbjct: 147 VKCQRAATTTFRKVESKEIKL 167
>gi|303237004|ref|ZP_07323576.1| thymidine kinase [Prevotella disiens FB035-09AN]
gi|302482784|gb|EFL45807.1| thymidine kinase [Prevotella disiens FB035-09AN]
Length = 203
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RY E V +HD+ + +
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDKNAIHSTPINS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++ +AN G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 101 --------EGLIDICNQLANNGVRVIVAGLDMDFKGIPFGPIPALCAIADQVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYVSHRL 164
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY E V +HD+ + + ++ DIDV+GI
Sbjct: 34 RRMKRAKFAKQKVEIFKPAIDTRYSEEDVVSHDKNAIHSTPINSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + ++ +AN G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLIDICNQLANNGVRVIVAGLDMDFKGIPFGPIPALCAIADQVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + V+LG
Sbjct: 154 CGALAYVSHRLVDNNHRVMLG 174
>gi|443243256|ref|YP_007376481.1| thymidine kinase [Nonlabens dokdonensis DSW-6]
gi|442800655|gb|AGC76460.1| thymidine kinase [Nonlabens dokdonensis DSW-6]
Length = 211
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RYD E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAQQKVEIFKPAIDTRYDEEMVVSHDANEIPSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ D V+GIDE QF + D+ +AVC
Sbjct: 77 AANIPLLASDCQVVGIDEAQFFD-----DEIVAVCN------------------------ 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 108 ----------------ALANRGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLAQYSYR 162
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR++R Q+A + I + A D RYD E V +HD ++ + + D V+
Sbjct: 31 LIRRLKRAQFAQQKVEIFKPAIDTRYDEEMVVSHDANEIPSTPVPAAANIPLLASDCQVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF D +V+ ++AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 91 GIDEAQFFDDEIVAVCNALANRGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVC 150
Query: 136 MSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE 195
A ++ R ++V+L + + E + R A Y+ M+ KD + E
Sbjct: 151 TRTGNLAQYSYRKTANEDVVL--LGEQQEYEPLSRA-----AYYKAMLSHKVKDIDVEAE 203
Query: 196 KV 197
++
Sbjct: 204 EI 205
>gi|345880919|ref|ZP_08832454.1| thymidine kinase [Prevotella oulorum F0390]
gi|343921393|gb|EGV32110.1| thymidine kinase [Prevotella oulorum F0390]
Length = 218
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY + V +HDQ + +
Sbjct: 41 EVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDVRYSEDDVVSHDQNSIHSTPIDA 100
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+ T DIDV+GIDE QF + D + VC
Sbjct: 101 SGALMLLTADIDVVGIDEAQFFD-----DGLVDVC------------------------- 130
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++AN G V+VA LD ++ F + +L +A+ V K+ A+C+
Sbjct: 131 ---------------NALANRGIRVIVAGLDMDYKGVPFGPMPALCAVADEVTKVHAICV 175
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 176 KCGALAYVSHRL 187
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY + V +HDQ + + L+ T DIDV+GI
Sbjct: 57 RRMKRAKFAKQRVEIFKPAIDVRYSEDDVVSHDQNSIHSTPIDASGALMLLTADIDVVGI 116
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V ++AN G V+VA LD ++ F + +L +A+ V K+ A+C+
Sbjct: 117 DEAQFFDDGLVDVCNALANRGIRVIVAGLDMDYKGVPFGPMPALCAVADEVTKVHAICVK 176
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + V+LG
Sbjct: 177 CGALAYVSHRLVANAHRVMLG 197
>gi|313676337|ref|YP_004054333.1| thymidine kinase [Marivirga tractuosa DSM 4126]
gi|312943035|gb|ADR22225.1| Thymidine kinase [Marivirga tractuosa DSM 4126]
Length = 192
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGKT ELIRR+ R A + I + D RYD +V +H++ K+ +
Sbjct: 20 ELICGSMFSGKTEELIRRLNRALIAKQKIEIFKPKLDTRYDESEVVSHNKTKIRSTPVDF 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + + +V+GIDE QF +
Sbjct: 80 AEDILLFSGNSEVVGIDEAQFFDA------------------------------------ 103
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++V+ ++A+ GK V++A LD F F + L+ +AE V K+ A+C+
Sbjct: 104 ---------EIVNVVNTLADQGKRVIIAGLDMDFSGKAFGSMPELMAIAEYVTKVHAICV 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A+++ R+ +EK+
Sbjct: 155 KCGGIASYSYRLSEEKQ 171
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + D RYD +V +H++ K+ + ++ + + +V+GI
Sbjct: 36 RRLNRALIAKQKIEIFKPKLDTRYDESEVVSHNKTKIRSTPVDFAEDILLFSGNSEVVGI 95
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++V+ ++A+ GK V++A LD F F + L+ +AE V K+ A+C+
Sbjct: 96 DEAQFFDAEIVNVVNTLADQGKRVIIAGLDMDFSGKAFGSMPELMAIAEYVTKVHAICVK 155
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C A+++ R+ +EK+ V+LG
Sbjct: 156 CGGIASYSYRLSEEKQKVMLG 176
>gi|257076468|ref|ZP_05570829.1| thymidine kinase related protein [Ferroplasma acidarmanus fer1]
Length = 216
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 88/201 (43%), Gaps = 47/201 (23%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
VI GPMFSGKT+ LI + R A ++ + D RYDT V+TH +L A+
Sbjct: 25 VITGPMFSGKTSRLIELLEREILAGRNTLLFKPEMDKRYDTTFVTTHKGMRLPAIVLNTD 84
Query: 214 N----KLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
N K+ +K++DVIGIDE QF N
Sbjct: 85 NEGVEKMYNLSKNVDVIGIDEAQF--------------------------------WNHG 112
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+ L PE A+ +A+ KIV AAL+ F + +I A+ V LTA
Sbjct: 113 SIL-----PE------IADKIASENKIVYAAALNKNHLGNPFKTSMDIISRADQVYSLTA 161
Query: 330 VCMSCFRDAAFTKRIGQEKEV 350
VC C DA F++RI KE+
Sbjct: 162 VCAKCGEDATFSQRILNGKEI 182
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 21 IRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELN----KLIPHTKDIDVI 76
+ R A ++ + D RYDT V TH +L A+ N K+ +K++DVI
Sbjct: 42 LEREILAGRNTLLFKPEMDKRYDTTFVTTHKGMRLPAIVLNTDNEGVEKMYNLSKNVDVI 101
Query: 77 GIDEGQFFPD---VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
GIDE QF+ + A+ +A+ KIV AAL+ F + +I A+ V LTA
Sbjct: 102 GIDEAQFWNHGSILPEIADKIASENKIVYAAALNKNHLGNPFKTSMDIISRADQVYSLTA 161
Query: 134 VCMSCFRDAAFTKRIGQEKEV 154
VC C DA F++RI KE+
Sbjct: 162 VCAKCGEDATFSQRILNGKEI 182
>gi|375012591|ref|YP_004989579.1| thymidine kinase [Owenweeksia hongkongensis DSM 17368]
gi|359348515|gb|AEV32934.1| thymidine kinase [Owenweeksia hongkongensis DSM 17368]
Length = 197
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A + I + D RY E V +HD+ + + L+ +DVIGI
Sbjct: 33 RRLKRAQFAKQKVEIFKPMVDTRYAEEDVVSHDKNAIRCTPVENSSNLLLLGDGVDVIGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD F+ F + +L+ AE V K+ AVC+
Sbjct: 93 DEAQFFDDGIVEVCNELANRGSRVIVAGLDMDFKGKPFGPMPNLMATAEYVTKVHAVCVR 152
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
A ++ R EK+V+LG
Sbjct: 153 TGNLANYSHRKTTNEKQVMLG 173
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 88/201 (43%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + D RY E V +HD+ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPMVDTRYAEEDVVSHDKNAIRCTPVEN 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ L+ +DVIGIDE QF + D + VC E
Sbjct: 77 SSNLLLLGDGVDVIGIDEAQFFD-----DGIVEVCNE----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC+
Sbjct: 109 -----------------LANRGSRVIVAGLDMDFKGKPFGPMPNLMATAEYVTKVHAVCV 151
Query: 333 SCFRDAAFTKR-IGQEKEVRI 352
A ++ R EK+V +
Sbjct: 152 RTGNLANYSHRKTTNEKQVML 172
>gi|222152016|ref|YP_002561176.1| thymidine kinase [Macrococcus caseolyticus JCSC5402]
gi|254807843|sp|B9E8G2.1|KITH_MACCJ RecName: Full=Thymidine kinase
gi|222121145|dbj|BAH18480.1| thymidine kinase [Macrococcus caseolyticus JCSC5402]
Length = 191
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-DV 75
RR+RR +A + ++ + + DDRY +V +H+ K+ AV+ ++++ H K+ D+
Sbjct: 25 LIRRVRRGLFAKQKVIVFKPSIDDRYSELEVVSHNGNKVEAVNVHHSSEILEHVKEAHDI 84
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF D+V A +A G V+VA LD F+ F + L+ ++E V KL AV
Sbjct: 85 IAIDEVQFFDNDIVGVATQLAEEGYRVIVAGLDMDFRGVPFEPVPELMAVSEHVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C ++ T+R+
Sbjct: 145 CSVCGAPSSRTQRL 158
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E + G MFSGK+ ELIRR+RR +A + ++ + + DDRY +V +H+ K+ AV+
Sbjct: 11 ECVTGSMFSGKSEELIRRVRRGLFAKQKVIVFKPSIDDRYSELEVVSHNGNKVEAVNVHH 70
Query: 213 LNKLIPHTKDI-DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H K+ D+I IDE QF +
Sbjct: 71 SSEILEHVKEAHDIIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V A +A G V+VA LD F+ F + L+ ++E V KL AVC
Sbjct: 95 ---------NDIVGVATQLAEEGYRVIVAGLDMDFRGVPFEPVPELMAVSEHVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 SVCGAPSSRTQRL 158
>gi|429220698|ref|YP_007182342.1| thymidine kinase [Deinococcus peraridilitoris DSM 19664]
gi|429131561|gb|AFZ68576.1| thymidine kinase [Deinococcus peraridilitoris DSM 19664]
Length = 202
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 90/207 (43%), Gaps = 56/207 (27%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI+GPMFSGK+ ELIRR+ R A R + + A DDRY V++H + + A
Sbjct: 8 GGHLEVIVGPMFSGKSEELIRRVTRAVIARQRVAVFKPAIDDRYHATHVASHSGRSVEAH 67
Query: 209 ---SAVELNKLIPHTKDI--------DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPI 257
S+ E+ +L+ + DV+G DE QF +
Sbjct: 68 AVRSSEEVRQLLRGETPLLSGEVELPDVVGFDEAQFFDA--------------------- 106
Query: 258 KRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSL 317
+V A +A+AG VV+A LD F+ F + L
Sbjct: 107 ------------------------GLVPLALELAHAGVRVVMAGLDLDFRGEPFGVMPDL 142
Query: 318 IPLAECVEKLTAVCMSCFRDAAFTKRI 344
+ AE VEKLTAVC+ C A T+R+
Sbjct: 143 LARAESVEKLTAVCVECGAPATRTQRL 169
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDI 73
RR+ R A R + + A DDRY VA+H + + A S+ E+ +L+ +
Sbjct: 26 LIRRVTRAVIARQRVAVFKPAIDDRYHATHVASHSGRSVEAHAVRSSEEVRQLLRGETPL 85
Query: 74 --------DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPL 124
DV+G DE QFF +V A +A+AG VV+A LD F+ F + L+
Sbjct: 86 LSGEVELPDVVGFDEAQFFDAGLVPLALELAHAGVRVVMAGLDLDFRGEPFGVMPDLLAR 145
Query: 125 AECVEKLTAVCMSCFRDAAFTKRI 148
AE VEKLTAVC+ C A T+R+
Sbjct: 146 AESVEKLTAVCVECGAPATRTQRL 169
>gi|415883778|ref|ZP_11545807.1| thymidine kinase [Bacillus methanolicus MGA3]
gi|387591573|gb|EIJ83890.1| thymidine kinase [Bacillus methanolicus MGA3]
Length = 192
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR +A + + + D+RY V +H+ TA
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTLFAKQKIAVFKPKMDNRYSEAAVVSHNGTSFTATPISH 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++DVI IDE QF +
Sbjct: 71 STEIFQHIDSEVDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + +AN+G V+VA LD F+ F ++ ++ +AE V KL AVC
Sbjct: 95 ---------SEIVDVLQQLANSGYRVIVAGLDQDFRGEPFGEMPKIMAIAEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 AVCGSPASRTQRL 158
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDVIG 77
RR+RR +A + + + D+RY V +H+ TA ++ H ++DVI
Sbjct: 27 RRVRRTLFAKQKIAVFKPKMDNRYSEAAVVSHNGTSFTATPISHSTEIFQHIDSEVDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + +AN+G V+VA LD F+ F ++ ++ +AE V KL AVC
Sbjct: 87 IDEVQFFDSEIVDVLQQLANSGYRVIVAGLDQDFRGEPFGEMPKIMAIAEQVTKLQAVCA 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|298375344|ref|ZP_06985301.1| thymidine kinase [Bacteroides sp. 3_1_19]
gi|298267844|gb|EFI09500.1| thymidine kinase [Bacteroides sp. 3_1_19]
Length = 196
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 89/197 (45%), Gaps = 46/197 (23%)
Query: 149 GQEK-EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA 207
GQ + EVI G MFSGKT ELIRR++R ++A R I + A D RY + V +HD + +
Sbjct: 14 GQGRIEVICGSMFSGKTEELIRRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPS 73
Query: 208 VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+ ++ T +IDV+GIDE QF + + + VC +
Sbjct: 74 TPVDSSSSILLFTSEIDVVGIDEAQFFD-----EGLVNVCNQ------------------ 110
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
+A G V+VA LD ++ F + L +A+ V K+
Sbjct: 111 ----------------------LAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKV 148
Query: 328 TAVCMSCFRDAAFTKRI 344
A+C+ C R A + RI
Sbjct: 149 HAICVKCGRLAYVSHRI 165
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY + V +HD + + + ++ T +IDV+GI
Sbjct: 35 RRLKRAEFAKQRVEIFKPAIDTRYSQDNVVSHDSNSIPSTPVDSSSSILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V+ +A G V+VA LD ++ F + L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLVNVCNQLAANGIRVIVAGLDMDYKGVPFGPMPELCAIADEVTKVHAICVK 154
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C R A + RI +K V LG
Sbjct: 155 CGRLAYVSHRIVRNDKRVFLG 175
>gi|317130776|ref|YP_004097058.1| thymidine kinase [Bacillus cellulosilyticus DSM 2522]
gi|315475724|gb|ADU32327.1| Thymidine kinase [Bacillus cellulosilyticus DSM 2522]
Length = 207
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 51/204 (25%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
T+R G EV+ G MFSGK+ ELIRR+RR Y + + + D+RY ++V +H+
Sbjct: 4 LTRREGW-LEVVCGSMFSGKSEELIRRVRRAYYGRQKVQVFKPEIDNRYSEKEVVSHNGT 62
Query: 204 KLTAV---SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRS 260
K+ A+ A + +L+ KD V+ IDE QF ++
Sbjct: 63 KVYALPVKGAAMILELL--EKDTQVVAIDEVQFFDL------------------------ 96
Query: 261 PFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPL 320
VV + +A+ G V+VA LD F+ F + SL+ L
Sbjct: 97 ---------------------GVVEVVQELADEGIRVIVAGLDQDFRGEPFGCMPSLLAL 135
Query: 321 AECVEKLTAVCMSCFRDAAFTKRI 344
AE V KL A+C+SC A+ T+R+
Sbjct: 136 AETVTKLQAICLSCGSPASRTQRL 159
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Y + + + D+RY ++V +H+ K+ A+ A + +L+ KD V
Sbjct: 28 RRVRRAYYGRQKVQVFKPEIDNRYSEKEVVSHNGTKVYALPVKGAAMILELL--EKDTQV 85
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF VV + +A+ G V+VA LD F+ F + SL+ LAE V KL A+
Sbjct: 86 VAIDEVQFFDLGVVEVVQELADEGIRVIVAGLDQDFRGEPFGCMPSLLALAETVTKLQAI 145
Query: 135 CMSCFRDAAFTKRI 148
C+SC A+ T+R+
Sbjct: 146 CLSCGSPASRTQRL 159
>gi|302875891|ref|YP_003844524.1| thymidine kinase [Clostridium cellulovorans 743B]
gi|307689324|ref|ZP_07631770.1| thymidine kinase [Clostridium cellulovorans 743B]
gi|302578748|gb|ADL52760.1| Thymidine kinase [Clostridium cellulovorans 743B]
Length = 197
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EV+ GPM+SGK+ ELIRR++R + N + + + A D+RYD E V +H +++ V S
Sbjct: 11 EVVCGPMYSGKSEELIRRVKRARIGNLKVQVFKPAIDNRYDDEAVVSHCGERVDGVAVSS 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ E+ +L+ D V+ IDE QF +
Sbjct: 71 SREILELL--EDDTKVVAIDEVQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
E DVVS +AN K ++ A LD F+ F + L+ +AE V+K+TA
Sbjct: 95 --------DELVDVVS---ELANEHKRIICAGLDTDFRGEPFGIMPKLMAIAEFVDKITA 143
Query: 330 VCMSCFRDAAFTKRI 344
+CM C A T+R+
Sbjct: 144 ICMKCGNPATRTQRL 158
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR++R + N + + + A D+RYD E V +H +++ V S+ E+ +L+ D V
Sbjct: 27 RRVKRARIGNLKVQVFKPAIDNRYDDEAVVSHCGERVDGVAVSSSREILELL--EDDTKV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D +V +AN K ++ A LD F+ F + L+ +AE V+K+TA+
Sbjct: 85 VAIDEVQFFDDELVDVVSELANEHKRIICAGLDTDFRGEPFGIMPKLMAIAEFVDKITAI 144
Query: 135 CMSCFRDAAFTKRI 148
CM C A T+R+
Sbjct: 145 CMKCGNPATRTQRL 158
>gi|317495272|ref|ZP_07953642.1| thymidine kinase [Gemella morbillorum M424]
gi|316914694|gb|EFV36170.1| thymidine kinase [Gemella morbillorum M424]
Length = 192
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ EL+RRI+R A ++ + + D+RYD KVSTH+ +VS
Sbjct: 11 ECICGSMFSGKSEELLRRIKRGVIAKQNVLLFKPSIDNRYDENKVSTHNGNSYESVSIDS 70
Query: 213 LNKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
++ + KD D+IGIDE QF +
Sbjct: 71 AEQIYDYVKDKKYDIIGIDEIQFFD----------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+VS ++A++G V+VA LD F+ F + ++ ++E V KL AV
Sbjct: 96 ----------NKIVSVINTLADSGVRVIVAGLDMDFKAEPFQPMPEIMAISEMVTKLHAV 145
Query: 331 CMSCFRDAAFTKRI 344
C C ++A+ ++R+
Sbjct: 146 CNKCGQEASRSQRL 159
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--IDVI 76
RRI+R A ++ + + D+RYD KV+TH+ +VS ++ + KD D+I
Sbjct: 27 RRIKRGVIAKQNVLLFKPSIDNRYDENKVSTHNGNSYESVSIDSAEQIYDYVKDKKYDII 86
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +VS ++A++G V+VA LD F+ F + ++ ++E V KL AVC
Sbjct: 87 GIDEIQFFDNKIVSVINTLADSGVRVIVAGLDMDFKAEPFQPMPEIMAISEMVTKLHAVC 146
Query: 136 MSCFRDAAFTKRI 148
C ++A+ ++R+
Sbjct: 147 NKCGQEASRSQRL 159
>gi|323490901|ref|ZP_08096096.1| thymidine kinase [Planococcus donghaensis MPA1U2]
gi|323395381|gb|EGA88232.1| thymidine kinase [Planococcus donghaensis MPA1U2]
gi|456013728|gb|EMF47365.1| Thymidine kinase [Planococcus halocryophilus Or1]
Length = 197
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR+RR Q+A + + + DDRY E V +H+ + A+
Sbjct: 11 ELICGSMFSGKSEELIRRVRRSQFAKQKIAVFKPKIDDRYSKEAVVSHNGATVIALPISR 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + T + DVI IDE QF F EN
Sbjct: 71 SSEMWDYITDEFDVIAIDEAQF----------------------------FDEAIIEN-- 100
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+ +AN G V+VA LD F+ F + +L+ +AE V KL AVC
Sbjct: 101 ---------------VQKLANHGFRVIVAGLDQDFRGRPFGPMPALLAIAEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 TVCGSPASRTQRL 158
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+RR Q+A + + + DDRY E V +H+ + A+ +++ + T + DVI
Sbjct: 27 RRVRRSQFAKQKIAVFKPKIDDRYSKEAVVSHNGATVIALPISRSSEMWDYITDEFDVIA 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + ++ + +AN G V+VA LD F+ F + +L+ +AE V KL AVC
Sbjct: 87 IDEAQFFDEAIIENVQKLANHGFRVIVAGLDQDFRGRPFGPMPALLAIAEQVTKLQAVCT 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|327403144|ref|YP_004343982.1| Thymidine kinase [Fluviicola taffensis DSM 16823]
gi|327318652|gb|AEA43144.1| Thymidine kinase [Fluviicola taffensis DSM 16823]
Length = 191
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + ++ + A D+RY E+V +H L A+ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRVEFAQQKLILFKPAIDNRYHEEQVVSHKGSSLEAIPVKD 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++I H K ++ IDE QF +
Sbjct: 77 SSEIIKHWKKERIVAIDEAQFFDA------------------------------------ 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V ++A G V++A LD + F + L+ +AE V K+ A+C+
Sbjct: 101 ---------GLVQVCANLAKQGVRVIIAGLDMDYLGKPFGPMPDLLCMAEYVTKVHAICV 151
Query: 333 SCFRDAAFTKR 343
SC A ++ R
Sbjct: 152 SCGNLAQYSHR 162
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + ++ + A D+RY E+V +H L A+ + +++I H K ++ I
Sbjct: 33 RRLKRVEFAQQKLILFKPAIDNRYHEEQVVSHKGSSLEAIPVKDSSEIIKHWKKERIVAI 92
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V ++A G V++A LD + F + L+ +AE V K+ A+C+S
Sbjct: 93 DEAQFFDAGLVQVCANLAKQGVRVIIAGLDMDYLGKPFGPMPDLLCMAEYVTKVHAICVS 152
Query: 138 CFRDAAFTKRIGQ-EKEVILG 157
C A ++ R + E +V++G
Sbjct: 153 CGNLAQYSHRTTKDEGQVLVG 173
>gi|340349591|ref|ZP_08672599.1| thymidine kinase [Prevotella nigrescens ATCC 33563]
gi|445115035|ref|ZP_21378108.1| thymidine kinase [Prevotella nigrescens F0103]
gi|339610716|gb|EGQ15562.1| thymidine kinase [Prevotella nigrescens ATCC 33563]
gi|444840530|gb|ELX67560.1| thymidine kinase [Prevotella nigrescens F0103]
Length = 202
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR ++A + I + A D RY E V +HD+ + +
Sbjct: 18 EVICGSMFSGKTEELIRRLRRAKFARQKVEIFKPAIDVRYSEEDVVSHDKNAIHSTPINS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +AN G V+VA LD ++ F I +L +A+ V K+ A+C+
Sbjct: 101 --------EGLVDICNQLANNGVRVIVAGLDMDYKGVPFGPIPALCAIADQVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGALAYASHRL 164
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR ++A + I + A D RY E V +HD+ + + ++ DIDV+GI
Sbjct: 34 RRLRRAKFARQKVEIFKPAIDVRYSEEDVVSHDKNAIHSTPINSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V+VA LD ++ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLVDICNQLANNGVRVIVAGLDMDYKGVPFGPIPALCAIADQVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + E V++G
Sbjct: 154 CGALAYASHRLVPDEHRVMIG 174
>gi|312142771|ref|YP_003994217.1| thymidine kinase [Halanaerobium hydrogeniformans]
gi|311903422|gb|ADQ13863.1| Thymidine kinase [Halanaerobium hydrogeniformans]
Length = 197
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPM+ GK+ ELIRR+RR + A + + + DDRY+ V +H L A+ +
Sbjct: 11 EVITGPMYCGKSEELIRRLRRVKIAKQKIKVFKALIDDRYNKNDVVSHSGNSLEAIPIEK 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ ++V+GIDE QF
Sbjct: 71 ADEILEQIDGTVNVVGIDEAQFF------------------------------------- 93
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ E +A+ G V+VA LD F+ F + L+ AE V+KL A+C
Sbjct: 94 --------HDDLIEICEKLADRGIRVIVAGLDRNFRSEPFGPMPELMARAEYVDKLHAIC 145
Query: 332 MSCFRDAAFTKRI 344
+ C A+ T+R+
Sbjct: 146 IQCGEPASRTQRL 158
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR+RR + A + + + DDRY+ V +H L A+ + ++++ ++V+G
Sbjct: 27 RRLRRVKIAKQKIKVFKALIDDRYNKNDVVSHSGNSLEAIPIEKADEILEQIDGTVNVVG 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D++ E +A+ G V+VA LD F+ F + L+ AE V+KL A+C+
Sbjct: 87 IDEAQFFHDDLIEICEKLADRGIRVIVAGLDRNFRSEPFGPMPELMARAEYVDKLHAICI 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 QCGEPASRTQRL 158
>gi|406908306|gb|EKD48852.1| hypothetical protein ACD_64C00103G0004 [uncultured bacterium]
Length = 208
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 49/199 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA---VS 209
EVI GPMFSGK+ ELIRR+RR + A + ++A DDRYD V++H+ KL A +
Sbjct: 12 EVICGPMFSGKSEELIRRLRRAEIAQQNVAVFKHAIDDRYDINNVTSHNGTKLPAHATAN 71
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L + + H ++ V+GIDE F
Sbjct: 72 GAHLLEKVQH-ENYTVVGIDEVHFYTT--------------------------------- 97
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D+++ ++ G V++A LD ++ F + +L+ +A+ + KL A
Sbjct: 98 ------------DIINVICALVENGVRVIIAGLDMDYRGVPFGPMPTLLAIADSITKLKA 145
Query: 330 VCMSCFRDAAFTKRIGQEK 348
+C C DA F++ + +
Sbjct: 146 ICTQCGADAHFSQLLAANR 164
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA---VSAVELNKLIPHTKDIDV 75
RR+RR + A + ++A DDRYD V +H+ KL A + L + + H ++ V
Sbjct: 28 RRLRRAEIAQQNVAVFKHAIDDRYDINNVTSHNGTKLPAHATANGAHLLEKVQH-ENYTV 86
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE F+ D+++ ++ G V++A LD ++ F + +L+ +A+ + KL A+
Sbjct: 87 VGIDEVHFYTTDIINVICALVENGVRVIIAGLDMDYRGVPFGPMPTLLAIADSITKLKAI 146
Query: 135 CMSCFRDAAFTKRIGQEKEVIL 156
C C DA F++ + + I+
Sbjct: 147 CTQCGADAHFSQLLAANRPTIV 168
>gi|399927874|ref|ZP_10785232.1| thymidine kinase [Myroides injenensis M09-0166]
Length = 212
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR++R Q+A R I + A D RYD E V +HD ++ + + DV
Sbjct: 30 ELIRRLKRAQFAKQRVEIFKPAIDTRYDEEYVVSHDSNEIRSTPVPAAANIRILGDGCDV 89
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF D ++S +AN+G V+VA LD F+ F + +L+ AE V K+ A+
Sbjct: 90 VGIDEAQFFDDEIISVCNDLANSGVRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAI 149
Query: 135 CMSCFRDAAFT-KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD 193
C A ++ ++ E V+LG T+ + R Y N R K+ R +
Sbjct: 150 CTRTGNLANYSFRKAASEDLVMLG------ETQEYEPLSRAAYYNAMRENERIKKEQREN 203
Query: 194 TEKVSTHD 201
T K D
Sbjct: 204 TTKTDLKD 211
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A R I + A D RYD E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPAIDTRYDEEYVVSHDSNEIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ DV+GIDE QF + D+ ++VC +
Sbjct: 77 AANIRILGDGCDVVGIDEAQFFD-----DEIISVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN+G V+VA LD F+ F + +L+ AE V K+ A+C
Sbjct: 109 -----------------LANSGVRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAICT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
>gi|288554411|ref|YP_003426346.1| thymidine kinase [Bacillus pseudofirmus OF4]
gi|288545571|gb|ADC49454.1| thymidine kinase [Bacillus pseudofirmus OF4]
Length = 206
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 89/196 (45%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGK+ ELIRR+RR + + + + A D+RY E+V +H+ K+ A +
Sbjct: 11 EVICGSMFSGKSEELIRRVRRVSFGKLKVQVFKPAIDNRYSEEEVVSHNGTKVCAMPVRM 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
S L ++P T+ V+ +DE QF +
Sbjct: 71 SVDILEHVLPETQ---VVAVDEVQFFD--------------------------------- 94
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
+V+ A+ +AN G V+ A LD F+ F I+ L+ LAE V KL
Sbjct: 95 ------------EGIVAVADELANRGIRVICAGLDQDFRGEPFGPIMPLMALAEEVTKLQ 142
Query: 329 AVCMSCFRDAAFTKRI 344
AVC C A+ T+R+
Sbjct: 143 AVCPVCGTPASRTQRL 158
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKDID 74
RR+RR + + + + A D+RY E+V +H+ K+ A+ S L ++P T+
Sbjct: 27 RRVRRVSFGKLKVQVFKPAIDNRYSEEEVVSHNGTKVCAMPVRMSVDILEHVLPETQ--- 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+ +DE QFF + +V+ A+ +AN G V+ A LD F+ F I+ L+ LAE V KL A
Sbjct: 84 VVAVDEVQFFDEGIVAVADELANRGIRVICAGLDQDFRGEPFGPIMPLMALAEEVTKLQA 143
Query: 134 VCMSCFRDAAFTKRI 148
VC C A+ T+R+
Sbjct: 144 VCPVCGTPASRTQRL 158
>gi|42524779|ref|NP_970159.1| thymidine kinase [Bdellovibrio bacteriovorus HD100]
gi|60390024|sp|Q6MHW4.1|KITH_BDEBA RecName: Full=Thymidine kinase
gi|39576989|emb|CAE78218.1| Thymidine kinase [Bdellovibrio bacteriovorus HD100]
Length = 204
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 58/198 (29%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV++G MFSGKT ELIRR+RR ++A + + + D RY+ V++HD LT + +
Sbjct: 14 EVVVGSMFSGKTEELIRRLRRAEFARLQIQVFKPIIDKRYNEMAVTSHD---LTTIDSTP 70
Query: 213 L-------NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+ N L P+TK V+GIDEGQF + Q
Sbjct: 71 IHDAEEIWNLLKPNTK---VVGIDEGQF-----------------FGQ------------ 98
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
++V A+ +A+ G V++A LD +Q F + +L+ +AE V
Sbjct: 99 ----------------NLVQIAQDLADRGLRVIIAGLDTDWQGKPFEPMPTLMAVAESVT 142
Query: 326 KLTAVCMSCFRDAAFTKR 343
K AVC+ C A+ T+R
Sbjct: 143 KQHAVCVVCGAPASRTQR 160
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 15/150 (10%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVEL-------NKLIPH 69
RR+RR ++A + + + D RY+ V +HD LT + + + N L P+
Sbjct: 28 LIRRLRRAEFARLQIQVFKPIIDKRYNEMAVTSHD---LTTIDSTPIHDAEEIWNLLKPN 84
Query: 70 TKDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
TK V+GIDEGQFF ++V A+ +A+ G V++A LD +Q F + +L+ +AE V
Sbjct: 85 TK---VVGIDEGQFFGQNLVQIAQDLADRGLRVIIAGLDTDWQGKPFEPMPTLMAVAESV 141
Query: 129 EKLTAVCMSCFRDAAFTKRI-GQEKEVILG 157
K AVC+ C A+ T+R G + +V++G
Sbjct: 142 TKQHAVCVVCGAPASRTQRTAGGDGQVLVG 171
>gi|440780058|ref|ZP_20958646.1| thymidine kinase [Clostridium pasteurianum DSM 525]
gi|440221734|gb|ELP60938.1| thymidine kinase [Clostridium pasteurianum DSM 525]
Length = 194
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPM+SGK+ ELIRRIRR + A + + + D+RY + V +H +K A+S
Sbjct: 11 EVIVGPMYSGKSEELIRRIRRAKIAKQKVQVFKPEIDNRYSLDDVVSHCGEKEEAISVKN 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ +DIDV+ IDE QF +
Sbjct: 71 SQEIVNFIEEDIDVLAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+++ ++++GK V+ A LD F+ F + L+ +AE V+K+ A+C
Sbjct: 95 ---------ENIIDILTKISDSGKRVICAGLDMDFRGEPFGCVPKLMAIAEFVDKIQAIC 145
Query: 332 MSCFRDAAFTKRI 344
M C A T+R+
Sbjct: 146 MCCGNPATRTQRL 158
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRIRR + A + + + D+RY + V +H +K A+S +++ + DIDV+
Sbjct: 27 RRIRRAKIAKQKVQVFKPEIDNRYSLDDVVSHCGEKEEAISVKNSQEIVNFIEEDIDVLA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF +++ ++++GK V+ A LD F+ F + L+ +AE V+K+ A+CM
Sbjct: 87 IDEVQFFDENIIDILTKISDSGKRVICAGLDMDFRGEPFGCVPKLMAIAEFVDKIQAICM 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 CCGNPATRTQRL 158
>gi|429739292|ref|ZP_19273052.1| thymidine kinase [Prevotella saccharolytica F0055]
gi|429157257|gb|EKX99858.1| thymidine kinase [Prevotella saccharolytica F0055]
Length = 192
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 87/196 (44%), Gaps = 45/196 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R +A I + + D RY E V +HD +T
Sbjct: 16 EVVCGSMFSGKTEELIRRMKRAVFAKQSVEIFKPSIDTRYSEEDVVSHDHNSITCTPIDS 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ DIDV+GIDE QF++ + + VC E
Sbjct: 76 SSAILLLAADIDVVGIDEAQFLD-----EGLVDVCNE----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L +A+ V K+ A+C+
Sbjct: 108 -----------------LANKGVRVIVAGLDMDFKGIPFGPMPALCAIADDVTKVHAICV 150
Query: 333 SCFRDAAFTKRIGQEK 348
C A + RI E+
Sbjct: 151 KCGSLAYVSHRIVDEE 166
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R +A I + + D RY E V +HD +T + ++ DIDV+GI
Sbjct: 32 RRMKRAVFAKQSVEIFKPSIDTRYSEEDVVSHDHNSITCTPIDSSSAILLLAADIDVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V+VA LD F+ F + +L +A+ V K+ A+C+
Sbjct: 92 DEAQFLDEGLVDVCNELANKGVRVIVAGLDMDFKGIPFGPMPALCAIADDVTKVHAICVK 151
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A + RI +E+ V++G
Sbjct: 152 CGSLAYVSHRIVDEERRVLVG 172
>gi|329770545|ref|ZP_08261923.1| thymidine kinase [Gemella sanguinis M325]
gi|328836294|gb|EGF85963.1| thymidine kinase [Gemella sanguinis M325]
Length = 192
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ EL+RRI+R A + ++ + + D+RYD +VSTH+ ++S +
Sbjct: 11 ECICGSMFSGKSEELLRRIKRGVIAKQKVLLFKPSIDNRYDENRVSTHNGNSYDSISIEK 70
Query: 213 LNKLIPHTKDI--DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ ++ KD D+IGIDE QF +
Sbjct: 71 SSDILNFVKDTKYDIIGIDEIQFFD----------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
D+V +A+ G V+VA LD F+ F+ + ++ ++E V KL AV
Sbjct: 96 ----------NDIVKIINKLADDGIRVIVAGLDMDFKAEPFHPMPEIMAISEMVTKLHAV 145
Query: 331 CMSCFRDAAFTKRI 344
C C ++A+ ++R+
Sbjct: 146 CNKCGKEASRSQRL 159
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI--DVI 76
RRI+R A + ++ + + D+RYD +V+TH+ ++S + + ++ KD D+I
Sbjct: 27 RRIKRGVIAKQKVLLFKPSIDNRYDENRVSTHNGNSYDSISIEKSSDILNFVKDTKYDII 86
Query: 77 GIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF D+V +A+ G V+VA LD F+ F+ + ++ ++E V KL AVC
Sbjct: 87 GIDEIQFFDNDIVKIINKLADDGIRVIVAGLDMDFKAEPFHPMPEIMAISEMVTKLHAVC 146
Query: 136 MSCFRDAAFTKRI 148
C ++A+ ++R+
Sbjct: 147 NKCGKEASRSQRL 159
>gi|359406144|ref|ZP_09198856.1| thymidine kinase [Prevotella stercorea DSM 18206]
gi|357556696|gb|EHJ38278.1| thymidine kinase [Prevotella stercorea DSM 18206]
Length = 200
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 54/201 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRRI+R +A R +I + D RY E+V +HD+ + +V
Sbjct: 16 EVVCGSMFSGKTEELIRRIKRATFARQRVVIFKPQIDTRYSEEEVVSHDRNAVMSVPLST 75
Query: 213 LNKLIPHTK---------DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
+++ + + D DV+GIDE QF +
Sbjct: 76 SKEILEYVQNHTTSTEGYDFDVVGIDEAQFFGM--------------------------- 108
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
D+V +AN G V++A LD FQ T F I +L +A+
Sbjct: 109 ------------------DLVEVCNQLANNGVRVIIAGLDMDFQCTPFGPIPALCAVADE 150
Query: 324 VEKLTAVCMSCFRDAAFTKRI 344
V K+ A+C+ C A + R+
Sbjct: 151 VTKVHAICVKCGALAYVSHRL 171
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK------- 71
RRI+R +A R +I + D RY E+V +HD+ + +V +++ + +
Sbjct: 32 RRIKRATFARQRVVIFKPQIDTRYSEEEVVSHDRNAVMSVPLSTSKEILEYVQNHTTSTE 91
Query: 72 --DIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
D DV+GIDE QFF D+V +AN G V++A LD FQ T F I +L +A+ V
Sbjct: 92 GYDFDVVGIDEAQFFGMDLVEVCNQLANNGVRVIIAGLDMDFQCTPFGPIPALCAVADEV 151
Query: 129 EKLTAVCMSCFRDAAFTKRIGQEKEVIL 156
K+ A+C+ C A + R+ ++ +L
Sbjct: 152 TKVHAICVKCGALAYVSHRLVHDQNQVL 179
>gi|89095598|ref|ZP_01168492.1| thymidine kinase [Bacillus sp. NRRL B-14911]
gi|89089344|gb|EAR68451.1| thymidine kinase [Bacillus sp. NRRL B-14911]
Length = 206
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + + + D+RY E V +H+ + A
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAQFAKQKIAVFKPQIDNRYSEEAVVSHNGTSVIAKPISH 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H +D+++I IDE QF +
Sbjct: 71 STDIFKHIDEDMEIIAIDEVQFFDA----------------------------------- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+VV + +A++G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 96 ----------EVVKVIQHLADSGYRVIAAGLDQDFRGEPFGQMPALMAIAELVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 AVCGSPASRTQRL 158
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
RR+RR Q+A + + + D+RY E V +H+ + A + H +D+++
Sbjct: 25 LIRRVRRAQFAKQKIAVFKPQIDNRYSEEAVVSHNGTSVIAKPISHSTDIFKHIDEDMEI 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF +VV + +A++G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAIDEVQFFDAEVVKVIQHLADSGYRVIAAGLDQDFRGEPFGQMPALMAIAELVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CAVCGSPASRTQRL 158
>gi|325279036|ref|YP_004251578.1| Thymidine kinase [Odoribacter splanchnicus DSM 20712]
gi|324310845|gb|ADY31398.1| Thymidine kinase [Odoribacter splanchnicus DSM 20712]
Length = 191
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 46/200 (23%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T R G EV+ G MFSGKT ELIRR++R Q+A + I + D RY E V +HD
Sbjct: 6 TNRAGW-IEVVCGSMFSGKTEELIRRLKRAQFARQKVEIFKPKIDVRYSDEDVVSHDANT 64
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
+ ++ T D+DV+GIDE QF +
Sbjct: 65 IRCTPVENSGNILLLTGDVDVVGIDEAQFFD----------------------------- 95
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
++VS +++A+ G V+VA LD + F + L+ +AE V
Sbjct: 96 ----------------SNIVSVCKTLADNGIRVIVAGLDMDYTGKPFGPMPDLMAVAEYV 139
Query: 325 EKLTAVCMSCFRDAAFTKRI 344
K+ A+C+ C A + R+
Sbjct: 140 TKVHAICVRCGNLAHHSHRL 159
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A + I + D RY E V +HD + ++ T D+DV+GI
Sbjct: 29 RRLKRAQFARQKVEIFKPKIDVRYSDEDVVSHDANTIRCTPVENSGNILLLTGDVDVVGI 88
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++VS +++A+ G V+VA LD + F + L+ +AE V K+ A+C+
Sbjct: 89 DEAQFFDSNIVSVCKTLADNGIRVIVAGLDMDYTGKPFGPMPDLMAVAEYVTKVHAICVR 148
Query: 138 CFRDAAFTKRIG-QEKEVILG 157
C A + R+ +K V+LG
Sbjct: 149 CGNLAHHSHRLSDNDKLVMLG 169
>gi|410461464|ref|ZP_11315114.1| thymidine kinase [Bacillus azotoformans LMG 9581]
gi|409925751|gb|EKN62953.1| thymidine kinase [Bacillus azotoformans LMG 9581]
Length = 201
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRIRR +YA + + D+RY V +H+ + A
Sbjct: 8 EVICGSMFSGKSEELIRRIRRAEYAKLTVQVFKPIIDNRYSKSSVVSHNGTSVIAKPVEN 67
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++I + DVIGIDE QF +
Sbjct: 68 SARIIELVNPETDVIGIDEVQFFD------------------------------------ 91
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V A+ +AN G ++ A LD F+ F + L+ LAE V KL A+C
Sbjct: 92 ---------DEIVEVAQLLANKGYRIICAGLDQDFRGEPFGSVPKLMALAESVTKLQAIC 142
Query: 332 MSCFRDAAFTKRI 344
+ C A+ T+R+
Sbjct: 143 VVCGSPASRTQRL 155
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRIRR +YA + + D+RY V +H+ + A ++I + DVIG
Sbjct: 24 RRIRRAEYAKLTVQVFKPIIDNRYSKSSVVSHNGTSVIAKPVENSARIIELVNPETDVIG 83
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D +V A+ +AN G ++ A LD F+ F + L+ LAE V KL A+C+
Sbjct: 84 IDEVQFFDDEIVEVAQLLANKGYRIICAGLDQDFRGEPFGSVPKLMALAESVTKLQAICV 143
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 144 VCGSPASRTQRL 155
>gi|94984685|ref|YP_604049.1| thymidine kinase [Deinococcus geothermalis DSM 11300]
gi|94554966|gb|ABF44880.1| Thymidine kinase [Deinococcus geothermalis DSM 11300]
Length = 219
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 90/208 (43%), Gaps = 57/208 (27%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI+GPMFSGK+ ELIRR+ R A R + + A DDRY V++H +++ AV
Sbjct: 24 GGHLEVIVGPMFSGKSEELIRRVTRAVIARQRVAVFKPAIDDRYHATHVASHTGRRIEAV 83
Query: 209 SAVELNKL------------IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAP 256
+ + + P T DV+G+DE QF GSD
Sbjct: 84 AVPDAAAIRAYLAGEGPLLSSPGTALPDVVGVDEAQFF----GSDLG------------- 126
Query: 257 IKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILS 316
P V+ AE AG V++A LD F+ F +
Sbjct: 127 ------------------------PLVLELAE----AGVRVILAGLDLDFRAEPFGCMPD 158
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRI 344
L+ AE VEKLTA+C C A ++R+
Sbjct: 159 LLARAESVEKLTAICTVCGAPATRSQRL 186
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL------------ 66
RR+ R A R + + A DDRY VA+H +++ AV+ + +
Sbjct: 44 RRVTRAVIARQRVAVFKPAIDDRYHATHVASHTGRRIEAVAVPDAAAIRAYLAGEGPLLS 103
Query: 67 IPHTKDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLA 125
P T DV+G+DE QFF D+ +A AG V++A LD F+ F + L+ A
Sbjct: 104 SPGTALPDVVGVDEAQFFGSDLGPLVLELAEAGVRVILAGLDLDFRAEPFGCMPDLLARA 163
Query: 126 ECVEKLTAVCMSCFRDAAFTKRI 148
E VEKLTA+C C A ++R+
Sbjct: 164 ESVEKLTAICTVCGAPATRSQRL 186
>gi|138896956|ref|YP_001127409.1| thymidine kinase [Geobacillus thermodenitrificans NG80-2]
gi|196249774|ref|ZP_03148470.1| Thymidine kinase [Geobacillus sp. G11MC16]
gi|166220765|sp|A4ITL0.1|KITH_GEOTN RecName: Full=Thymidine kinase
gi|134268469|gb|ABO68664.1| Thymidine kinase [Geobacillus thermodenitrificans NG80-2]
gi|196210650|gb|EDY05413.1| Thymidine kinase [Geobacillus sp. G11MC16]
Length = 207
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK+ ELIRRIRR Q+A + + D+RY + V +H+ + A+ +
Sbjct: 11 EVICGSMFSGKSEELIRRIRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
EL + I T DV+ IDE QF SD
Sbjct: 71 PAELFRYISATT--DVVAIDEVQFF-----SD---------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ +++A+ G V+ A LD F+ F + +L+ LAE V KL A
Sbjct: 96 ------------DIIDVVQTLADRGYRVIAAGLDQDFRGEPFGPVPALMALAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RRIRR Q+A + + D+RY + V +H+ + A+ + EL + I T D V
Sbjct: 27 RRIRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVATPAELFRYISATTD--V 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D ++ +++A+ G V+ A LD F+ F + +L+ LAE V KL AV
Sbjct: 85 VAIDEVQFFSDDIIDVVQTLADRGYRVIAAGLDQDFRGEPFGPVPALMALAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|345868068|ref|ZP_08820064.1| thymidine kinase [Bizionia argentinensis JUB59]
gi|344047550|gb|EGV43178.1| thymidine kinase [Bizionia argentinensis JUB59]
Length = 210
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 87/195 (44%), Gaps = 47/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + D RYD E V +HD ++ + + V
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPTVDSRYDEEMVVSHDANQIRS-TPVP 75
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
IP D DV+GIDE QF + D+ + VC +
Sbjct: 76 AAANIPILADGCDVVGIDEAQFFD-----DEIVRVCND---------------------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD F+ F + +L+ AE V K+ A+C
Sbjct: 109 ------------------LANKGVRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAIC 150
Query: 332 MSCFRDAAFTKRIGQ 346
A F+ R Q
Sbjct: 151 TKTGNLAQFSYRKSQ 165
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-ID 74
RR++R Q+A + I + D RYD E V +HD ++ + + V IP D D
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPTVDSRYDEEMVVSHDANQIRS-TPVPAAANIPILADGCD 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF D +V +AN G V+VA LD F+ F + +L+ AE V K+ A
Sbjct: 89 VVGIDEAQFFDDEIVRVCNDLANKGVRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
+C A F+ R Q ++L
Sbjct: 149 ICTKTGNLAQFSYRKSQNDNLVL 171
>gi|343082904|ref|YP_004772199.1| thymidine kinase [Cyclobacterium marinum DSM 745]
gi|342351438|gb|AEL23968.1| Thymidine kinase [Cyclobacterium marinum DSM 745]
Length = 192
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 45/196 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R A R I + A D RYD V +H++ + +
Sbjct: 20 EVICGSMFSGKTEELIRRLNRALIAKQRVEIFKPAIDKRYDENNVVSHNENIIRSTPVQF 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ + DV+GIDE QF +
Sbjct: 80 ADDILLLAGNCDVVGIDEVQFFDA------------------------------------ 103
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++ E +AN G V+VA LD F+ F + L+ +AE V K+ A+CM
Sbjct: 104 ---------QIIPVVEQLANNGIRVIVAGLDMDFEGKPFEPMPQLLAIAEYVTKVHAICM 154
Query: 333 SCFRDAAFTKRIGQEK 348
C A+++ R+ +K
Sbjct: 155 KCGDLASYSFRLSGDK 170
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A R I + A D RYD V +H++ + + + ++ + DV+GI
Sbjct: 36 RRLNRALIAKQRVEIFKPAIDKRYDENNVVSHNENIIRSTPVQFADDILLLAGNCDVVGI 95
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ E +AN G V+VA LD F+ F + L+ +AE V K+ A+CM
Sbjct: 96 DEVQFFDAQIIPVVEQLANNGIRVIVAGLDMDFEGKPFEPMPQLLAIAEYVTKVHAICMK 155
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A+++ R+ G + +V+LG
Sbjct: 156 CGDLASYSFRLSGDKSKVMLG 176
>gi|15896141|ref|NP_349490.1| thymidine kinase [Clostridium acetobutylicum ATCC 824]
gi|337738095|ref|YP_004637542.1| thymidine kinase [Clostridium acetobutylicum DSM 1731]
gi|384459606|ref|YP_005672026.1| thymidine kinase [Clostridium acetobutylicum EA 2018]
gi|60390149|sp|Q97F65.1|KITH_CLOAB RecName: Full=Thymidine kinase
gi|15025935|gb|AAK80830.1|AE007786_3 Thymidine kinase [Clostridium acetobutylicum ATCC 824]
gi|325510295|gb|ADZ21931.1| thymidine kinase [Clostridium acetobutylicum EA 2018]
gi|336292172|gb|AEI33306.1| thymidine kinase [Clostridium acetobutylicum DSM 1731]
Length = 195
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPM+SGK+ ELIRRIRR + A + + + D+RY E V +H +K AV+
Sbjct: 11 EVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKN 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + +D +VI IDE QF +
Sbjct: 71 SREILKYFEEDTEVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V +A +G+ V+ A LD F+ F I L+ +AE V+K+ A+C
Sbjct: 95 ---------DEIVEIVNKIAESGRRVICAGLDMDFRGKPFGPIPELMAIAEFVDKIQAIC 145
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 146 VVCGNPATRTQRL 158
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDID 74
RRIRR + A + + + D+RY E V +H +K AV+ +++ + +D +
Sbjct: 24 ELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKNSREILKYFEEDTE 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VI IDE QFF D +V +A +G+ V+ A LD F+ F I L+ +AE V+K+ A
Sbjct: 84 VIAIDEVQFFDDEIVEIVNKIAESGRRVICAGLDMDFRGKPFGPIPELMAIAEFVDKIQA 143
Query: 134 VCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKD 189
+C+ C A T+R+ K P F LI + Y+ +C +V K+
Sbjct: 144 ICVVCGNPATRTQRLINGK-----PAFYDDPVVLIGAMESYEARCRKCHVVPQKKE 194
>gi|297833570|ref|XP_002884667.1| hypothetical protein ARALYDRAFT_478117 [Arabidopsis lyrata subsp.
lyrata]
gi|297330507|gb|EFH60926.1| hypothetical protein ARALYDRAFT_478117 [Arabidopsis lyrata subsp.
lyrata]
Length = 236
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 85/197 (43%), Gaps = 52/197 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
VI+GPMFSGK+T L+RRI+ +++ +KD RY + V THD + +
Sbjct: 34 HVIMGPMFSGKSTSLLRRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPD 93
Query: 213 LNKLIPHT------KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
L P +DVIGIDE QF D Y C+ +A
Sbjct: 94 LMSF-PEKFGQDAYNKLDVIGIDEAQFF-----GDLYEFCCK----------------VA 131
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+++ GK V+VA LDG + R F +L +IP+A+ V K
Sbjct: 132 DDD------------------------GKTVIVAGLDGDYLRRSFGAVLDIIPIADSVTK 167
Query: 327 LTAVCMSCFRDAAFTKR 343
LTA C C A FT R
Sbjct: 168 LTARCEVCGHKAFFTLR 184
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT------KD 72
RRI+ +++ +KD RY + V THD + +L P
Sbjct: 50 RRIKSEISDGRSVAMLKSSKDTRYAKDSVVTHDGIGFPCWALPDLMSF-PEKFGQDAYNK 108
Query: 73 IDVIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+DVIGIDE QFF D+ F +A+ GK V+VA LDG + R F +L +IP+A+ V KL
Sbjct: 109 LDVIGIDEAQFFGDLYEFCCKVADDDGKTVIVAGLDGDYLRRSFGAVLDIIPIADSVTKL 168
Query: 132 TAVCMSCFRDAAFTKR 147
TA C C A FT R
Sbjct: 169 TARCEVCGHKAFFTLR 184
>gi|224025941|ref|ZP_03644307.1| hypothetical protein BACCOPRO_02687 [Bacteroides coprophilus DSM
18228]
gi|224019177|gb|EEF77175.1| hypothetical protein BACCOPRO_02687 [Bacteroides coprophilus DSM
18228]
Length = 198
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 83/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R +A R I + + D RY EKV +HD + +
Sbjct: 19 EVICGSMFSGKTEELIRRLKRATFARQRVEIFKPSIDVRYSEEKVVSHDNNSIPSTPVDS 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ T +IDV+GIDE QF + + VC E
Sbjct: 79 SASILLFTSEIDVVGIDEAQFFD-----EGLTEVCNE----------------------- 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+V LD ++ F I SL +A+ V K+ A+C+
Sbjct: 111 -----------------LANNGIRVIVVGLDMDYKGIPFGPIPSLCAIADEVTKVHAICV 153
Query: 333 SCFRDAAFTKR 343
C A + R
Sbjct: 154 KCGDLAYVSHR 164
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R +A R I + + D RY EKV +HD + + ++ T +IDV+GI
Sbjct: 35 RRLKRATFARQRVEIFKPSIDVRYSEEKVVSHDNNSIPSTPVDSSASILLFTSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + + +AN G V+V LD ++ F I SL +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLTEVCNELANNGIRVIVVGLDMDYKGIPFGPIPSLCAIADEVTKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + +K V+LG
Sbjct: 155 CGDLAYVSHRTVHNDKRVLLG 175
>gi|313204815|ref|YP_004043472.1| thymidine kinase [Paludibacter propionicigenes WB4]
gi|312444131|gb|ADQ80487.1| Thymidine kinase [Paludibacter propionicigenes WB4]
Length = 194
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R +A R I + D RY ++V +HD+ + + ++ + D+DVIGI
Sbjct: 34 RRLKRANFAKQRVEIFKPKIDTRYSEDEVVSHDKTAIRSTPVESSGSILLMSGDVDVIGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +AN G V++A LD F+ F + +L +AE V K+ A+C+
Sbjct: 94 DEAQFFDEGLVDVCTQLANQGIRVIIAGLDMDFKGVPFGPMPALCAIAEDVFKVHAICVR 153
Query: 138 CFRDAAFTKR-IGQEKEVILGPM 159
C A + R + +K V+LG M
Sbjct: 154 CGALAYVSHRLVDSDKRVLLGEM 176
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R +A R I + D RY ++V +HD+ + +
Sbjct: 18 EVICGSMFSGKTEELIRRLKRANFAKQRVEIFKPKIDTRYSEDEVVSHDKTAIRSTPVES 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + D+DVIGIDE QF + + + VC +
Sbjct: 78 SGSILLMSGDVDVIGIDEAQFFD-----EGLVDVCTQ----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD F+ F + +L +AE V K+ A+C+
Sbjct: 110 -----------------LANQGIRVIIAGLDMDFKGVPFGPMPALCAIAEDVFKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 RCGALAYVSHRL 164
>gi|385800857|ref|YP_005837261.1| thymidine kinase [Halanaerobium praevalens DSM 2228]
gi|309390221|gb|ADO78101.1| Thymidine kinase [Halanaerobium praevalens DSM 2228]
Length = 192
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPM+ GK+ ELIRR+ R + A + + + DDRY + V +H + AV
Sbjct: 11 EIITGPMYCGKSEELIRRLNRVKIAKQKVRVFKPVLDDRYSKKDVVSHSGNSIEAVPVDH 70
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ K +DV+GIDE QF
Sbjct: 71 PEEILKRIDKTVDVVGIDEAQFFH------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V+ E +A+ G V++A LD F+ F + L+ AE V+KL A+C
Sbjct: 95 ---------SDLVAICEELADEGIRVILAGLDRDFRNQPFGPMPELMARAEYVDKLHAIC 145
Query: 332 MSCFRDAAFTKRI 344
+ C A+ T+R+
Sbjct: 146 IQCGEPASRTQRL 158
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDVIG 77
RR+ R + A + + + DDRY + V +H + AV +++ K +DV+G
Sbjct: 27 RRLNRVKIAKQKVRVFKPVLDDRYSKKDVVSHSGNSIEAVPVDHPEEILKRIDKTVDVVG 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V+ E +A+ G V++A LD F+ F + L+ AE V+KL A+C+
Sbjct: 87 IDEAQFFHSDLVAICEELADEGIRVILAGLDRDFRNQPFGPMPELMARAEYVDKLHAICI 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 QCGEPASRTQRL 158
>gi|295136430|ref|YP_003587106.1| thymidine kinase [Zunongwangia profunda SM-A87]
gi|294984445|gb|ADF54910.1| thymidine kinase [Zunongwangia profunda SM-A87]
Length = 215
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A I + A D RYD E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQNVEIFKPAVDTRYDEEMVVSHDANEIRSTPVPS 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ ++VC +
Sbjct: 77 ASNIRLLADGCDVVGIDEAQFFD-----DEIVSVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G VVVA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGIRVVVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLAQYSYR 162
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR++R Q+A I + A D RYD E V +HD ++ + + + DV
Sbjct: 30 ELIRRLKRAQFAKQNVEIFKPAVDTRYDEEMVVSHDANEIRSTPVPSASNIRLLADGCDV 89
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF D +VS +AN G VVVA LD F+ F + +L+ AE V K+ AV
Sbjct: 90 VGIDEAQFFDDEIVSVCNDLANRGIRVVVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAV 149
Query: 135 CMSCFRDAAFTKRIGQEKEVILGPMFSGKTTE 166
C A ++ R +++ F G+T E
Sbjct: 150 CTRTGNLAQYSYRKAINDDLV----FLGETEE 177
>gi|60390095|sp|Q898Y8.2|KITH_CLOTE RecName: Full=Thymidine kinase
Length = 192
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI GPM+SGK+ ELIRR+RR + A + + + D+RY E V +H K AV S
Sbjct: 11 EVITGPMYSGKSEELIRRVRRVKIAKQKVQVFKPEIDNRYSNEDVVSHCGDKEGAVPIKS 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ ++ KLI +D +V+ IDE QF +
Sbjct: 71 SEDILKLI--KEDTEVVAIDEAQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++ +AN GK V+ A LD F+ F + +I +AE V K+ A
Sbjct: 95 -----------KGILEVVNKIANEGKRVICAGLDQDFKGEPFGYMPDIIAVAEFVHKVQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VCM C A T+R+
Sbjct: 144 VCMICGNPATRTQRL 158
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR + A + + + D+RY E V +H K AV S+ ++ KLI +D +V
Sbjct: 27 RRVRRVKIAKQKVQVFKPEIDNRYSNEDVVSHCGDKEGAVPIKSSEDILKLI--KEDTEV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF ++ +AN GK V+ A LD F+ F + +I +AE V K+ AV
Sbjct: 85 VAIDEAQFFDKGILEVVNKIANEGKRVICAGLDQDFKGEPFGYMPDIIAVAEFVHKVQAV 144
Query: 135 CMSCFRDAAFTKRI 148
CM C A T+R+
Sbjct: 145 CMICGNPATRTQRL 158
>gi|319650899|ref|ZP_08005035.1| thymidine kinase [Bacillus sp. 2_A_57_CT2]
gi|317397392|gb|EFV78094.1| thymidine kinase [Bacillus sp. 2_A_57_CT2]
Length = 206
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + + + D+RY E V +H+ + A +
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAQFAKQQIAVFKPQIDNRYSDEAVVSHNGTSVIARPISQ 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ + T DID+I IDE QF +
Sbjct: 71 STDIFKYITADIDLIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + +A++G V+ A LD F+ F + +++ +AE V KL AVC
Sbjct: 95 ---------DEIVKVIQHLADSGHRVIAAGLDQDFRGEPFGQMPAIMSIAELVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 AVCGSPASRTQRL 158
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR Q+A + + + D+RY E V +H+ + A + + + T DID+
Sbjct: 25 LIRRVRRAQFAKQQIAVFKPQIDNRYSDEAVVSHNGTSVIARPISQSTDIFKYITADIDL 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF D +V + +A++G V+ A LD F+ F + +++ +AE V KL AV
Sbjct: 85 IAIDEVQFFDDEIVKVIQHLADSGHRVIAAGLDQDFRGEPFGQMPAIMSIAELVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CAVCGSPASRTQRL 158
>gi|347535004|ref|YP_004842429.1| thymidine kinase [Flavobacterium branchiophilum FL-15]
gi|345528162|emb|CCB68192.1| Thymidine kinase [Flavobacterium branchiophilum FL-15]
Length = 194
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RYD E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYDNEMVVSHDSNEIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ + +C +
Sbjct: 77 AANIAILAQGCDVVGIDEAQFFD-----DEIVKICND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANNGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLAHYSFR 162
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A + I + A D RYD E V +HD ++ + + + DV+GI
Sbjct: 33 RRLKRAQFAKQKVEIFKPAIDTRYDNEMVVSHDSNEIRSTPVPAAANIAILAQGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVKICNDLANNGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ ++ + V+LG
Sbjct: 153 TGNLAHYSFRKKANDNLVMLG 173
>gi|325284899|ref|YP_004264361.1| Thymidine kinase [Deinococcus proteolyticus MRP]
gi|324316614|gb|ADY27726.1| Thymidine kinase [Deinococcus proteolyticus MRP]
Length = 208
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 85/209 (40%), Gaps = 54/209 (25%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI+GPMFSGK+ ELIRR+ R A + + + A DDRY V++H + L AV
Sbjct: 8 GGHLEVIVGPMFSGKSEELIRRLTRAVIARQQVAVFKPALDDRYHVAAVASHAGRSLDAV 67
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+P I EG + G D
Sbjct: 68 P-------VPDAAAIRAALNGEGPLLAAHAGPDT-------------------------- 94
Query: 269 NAALNVPPPPEFPDVVSFAES-------------MANAGKIVVVAALDGTFQRTGFNDIL 315
PP +PDVV E+ +A G VV+A LD F+ F +
Sbjct: 95 --------PPVWPDVVGIDEAQFFGADLIPLVLELAGEGVRVVLAGLDLDFRAEPFGVMP 146
Query: 316 SLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
L+ AE VEKLTA+C C A ++R+
Sbjct: 147 ELLARAESVEKLTAICTVCGAPATRSQRL 175
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-------LN---KL 66
RR+ R A + + + A DDRY VA+H + L AV + LN L
Sbjct: 26 LIRRLTRAVIARQQVAVFKPALDDRYHVAAVASHAGRSLDAVPVPDAAAIRAALNGEGPL 85
Query: 67 I-----PHTKDI--DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDI 118
+ P T + DV+GIDE QFF D++ +A G VV+A LD F+ F +
Sbjct: 86 LAAHAGPDTPPVWPDVVGIDEAQFFGADLIPLVLELAGEGVRVVLAGLDLDFRAEPFGVM 145
Query: 119 LSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
L+ AE VEKLTA+C C A ++R+
Sbjct: 146 PELLARAESVEKLTAICTVCGAPATRSQRL 175
>gi|408369527|ref|ZP_11167308.1| thymidine kinase [Galbibacter sp. ck-I2-15]
gi|407745273|gb|EKF56839.1| thymidine kinase [Galbibacter sp. ck-I2-15]
Length = 226
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 87/193 (45%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + + D+RYD + V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPSVDNRYDDQMVISHDANEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ D DV+GIDE QF +
Sbjct: 77 AANIRLL--ADDCDVVGIDEAQFFD----------------------------------- 99
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
++VS +AN G VVVA LD F+ F + +L+ AE V K+ AV
Sbjct: 100 ----------EEIVSVCNDLANKGVRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLANYSFR 162
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R Q+A + I + + D+RYD + V +HD ++ T V A +L+ D
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPSVDNRYDDQMVISHDANEIRSTPVPAAANIRLL--ADDC 87
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFF ++VS +AN G VVVA LD F+ F + +L+ AE V K+
Sbjct: 88 DVVGIDEAQFFDEEIVSVCNDLANKGVRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFT-KRIGQEKEVILG 157
AVC A ++ ++ E V+LG
Sbjct: 148 AVCTRTGNLANYSFRKSSNENLVLLG 173
>gi|406962350|gb|EKD88745.1| hypothetical protein ACD_34C00369G0001 [uncultured bacterium]
Length = 176
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDV 75
RR+RR A + + + D RY EKV +H A + N++IP + D V
Sbjct: 9 LIRRLRRATIAKQKVQVFKPVIDLRYGVEKVTSHAGSDFAATPVQKANQIIPLLEPDTTV 68
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF D + + ES+A G V+VA LD F+ F + ++ AE V KL A+
Sbjct: 69 VGIDEAQFFDDEIANVVESLAEKGIRVIVAGLDLNFKAEPFGSMPVIMAHAEQVLKLQAI 128
Query: 135 CMSCFRDAAFTKRI 148
CM C A+ ++R+
Sbjct: 129 CMVCGEPASRSQRL 142
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 82/194 (42%), Gaps = 46/194 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MF GKT ELIRR+RR A + + + D RY EKV++H A + N++IP
Sbjct: 1 MFCGKTDELIRRLRRATIAKQKVQVFKPVIDLRYGVEKVTSHAGSDFAATPVQKANQIIP 60
Query: 219 HTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPP 277
+ D V+GIDE QF +
Sbjct: 61 LLEPDTTVVGIDEAQFFD------------------------------------------ 78
Query: 278 PEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRD 337
++ + ES+A G V+VA LD F+ F + ++ AE V KL A+CM C
Sbjct: 79 ---DEIANVVESLAEKGIRVIVAGLDLNFKAEPFGSMPVIMAHAEQVLKLQAICMVCGEP 135
Query: 338 AAFTKRIGQEKEVR 351
A+ ++R+ K R
Sbjct: 136 ASRSQRLVNGKPAR 149
>gi|336172063|ref|YP_004579201.1| thymidine kinase [Lacinutrix sp. 5H-3-7-4]
gi|334726635|gb|AEH00773.1| Thymidine kinase [Lacinutrix sp. 5H-3-7-4]
Length = 215
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 47/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RYD E V +HD ++ + + V
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDVRYDDEMVVSHDSNEIRS-TPVP 75
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
IP D DV+GIDE QF + D+ + VC +
Sbjct: 76 AAANIPILADGCDVVGIDEAQFFD-----DEIVRVCND---------------------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 ------------------LANKGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVC 150
Query: 332 MSCFRDAAFTKRIGQEKEV 350
A F+ R + +++
Sbjct: 151 TRTGNLAQFSYRKNKSEDL 169
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-ID 74
RR++R Q+A + I + A D RYD E V +HD ++ + + V IP D D
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPAIDVRYDDEMVVSHDSNEIRS-TPVPAAANIPILADGCD 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF D +V +AN G V+VA LD F+ F + +L+ AE V K+ A
Sbjct: 89 VVGIDEAQFFDDEIVRVCNDLANKGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
VC A F+ R + ++++L
Sbjct: 149 VCTRTGNLAQFSYRKNKSEDLVL 171
>gi|384097204|ref|ZP_09998325.1| thymidine kinase [Imtechella halotolerans K1]
gi|383837172|gb|EID76572.1| thymidine kinase [Imtechella halotolerans K1]
Length = 228
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + A D RY+ E V +HD ++ T V A
Sbjct: 26 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYNEEMVVSHDANQIRSTPVPA 85
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ + DV+GIDE QF + D+ ++VC +
Sbjct: 86 AANIRLLADS--CDVVGIDEAQFFD-----DEIVSVCND--------------------- 117
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 118 -------------------LANKGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 158
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 159 CTRTGNLAQYSHR 171
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDID 74
RR++R Q+A + I + A D RY+ E V +HD ++ T V A +L+ + D
Sbjct: 40 LIRRLKRAQFAKQKVEIFKPAIDTRYNEEMVVSHDANQIRSTPVPAAANIRLLADS--CD 97
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF D +VS +AN G V+VA LD F+ F + +L+ AE V K+ A
Sbjct: 98 VVGIDEAQFFDDEIVSVCNDLANKGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHA 157
Query: 134 VCMSCFRDAAFTKR-IGQEKEVILG 157
VC A ++ R +K V+LG
Sbjct: 158 VCTRTGNLAQYSHRKAAGDKLVMLG 182
>gi|240047802|ref|YP_002961190.1| thymidine kinase [Mycoplasma conjunctivae HRC/581]
gi|239985374|emb|CAT05387.1| Thymidine kinase [Mycoplasma conjunctivae]
Length = 187
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 47/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+ ELI+R+R YAN ++V+ DDR+ T ++ + ++ + +
Sbjct: 11 EVITGPMFSGKSDELIKRVRTLSYANINTLVVKPKIDDRWTTHEIVSRSGARIPTFNVQD 70
Query: 213 LN--KLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
K + D I +DE QF E NE
Sbjct: 71 TQEIKALFEQGDYQAIAVDEIQFFE-------------------------------NE-- 97
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
++ + + +AN G V+ + LD + R F + L+ LAE V KL A+
Sbjct: 98 ------------IIKYLDDLANKGIRVIASGLDQDYARNPFGPLPQLMALAESVTKLQAI 145
Query: 331 CMSCFRDAAFTKRIGQEKE 349
C C R A + RI KE
Sbjct: 146 CNICKRAATTSARIINSKE 164
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELN--KLIPHTKDI 73
+R+R YAN ++V+ DDR+ T ++ + ++ + + K + D
Sbjct: 24 ELIKRVRTLSYANINTLVVKPKIDDRWTTHEIVSRSGARIPTFNVQDTQEIKALFEQGDY 83
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
I +DE QFF + ++ + + +AN G V+ + LD + R F + L+ LAE V KL
Sbjct: 84 QAIAVDEIQFFENEIIKYLDDLANKGIRVIASGLDQDYARNPFGPLPQLMALAESVTKLQ 143
Query: 133 AVCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIR 172
A+C C R A + RI KE F G + E R R
Sbjct: 144 AICNICKRAATTSARIINSKE----QTFIGDSEEYQARCR 179
>gi|307566073|ref|ZP_07628531.1| thymidine kinase [Prevotella amnii CRIS 21A-A]
gi|307345261|gb|EFN90640.1| thymidine kinase [Prevotella amnii CRIS 21A-A]
Length = 196
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A R I + A D RY E+V +HD + +
Sbjct: 15 EVICGSMFSGKTEELIRRMKRAKFAKQRVEIFKPAIDVRYSEEEVVSHDHNSILSTPIGS 74
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF +
Sbjct: 75 SESILLLASDIDVVGIDEAQFFD------------------------------------- 97
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V ++A G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 98 --------QGLVEVCNTLAKNGMRVIIAGLDMDYKGVPFGPIPALCAIADDVTKVHAICV 149
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 150 KCGALAYLSHRL 161
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A R I + A D RY E+V +HD + + ++ DIDV+GI
Sbjct: 31 RRMKRAKFAKQRVEIFKPAIDVRYSEEEVVSHDHNSILSTPIGSSESILLLASDIDVVGI 90
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V ++A G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 91 DEAQFFDQGLVEVCNTLAKNGMRVIIAGLDMDYKGVPFGPIPALCAIADDVTKVHAICVK 150
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + E V+LG
Sbjct: 151 CGALAYLSHRLVANEHRVLLG 171
>gi|291295737|ref|YP_003507135.1| thymidine kinase [Meiothermus ruber DSM 1279]
gi|290470696|gb|ADD28115.1| Thymidine kinase [Meiothermus ruber DSM 1279]
Length = 200
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 86/201 (42%), Gaps = 47/201 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV++GPMFSGK+ ELIRR++R A R ++ + DDRY V +HD ++ A++ +
Sbjct: 12 EVVVGPMFSGKSDELIRRVKRALIARQRVLVFKPRLDDRYHASDVFSHDGRRAEAIAVRD 71
Query: 213 LNKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L H D DV+ +DE QF +
Sbjct: 72 AAELRAHLSDPLPDVVAVDEAQFFDA---------------------------------- 97
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+V+ +A+ G V+ A LD F+ F + L+ AE VEKL AV
Sbjct: 98 -----------GLVALVLELADRGVRVICAGLDMDFRGEPFGIMPQLLARAEYVEKLFAV 146
Query: 331 CMSCFRDAAFTKRIGQEKEVR 351
C C A T+R K R
Sbjct: 147 CPVCGAPATRTQRFVNGKPAR 167
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI--DVI 76
RR++R A R ++ + DDRY V +HD ++ A++ + +L H D DV+
Sbjct: 28 RRVKRALIARQRVLVFKPRLDDRYHASDVFSHDGRRAEAIAVRDAAELRAHLSDPLPDVV 87
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
+DE QFF +V+ +A+ G V+ A LD F+ F + L+ AE VEKL AVC
Sbjct: 88 AVDEAQFFDAGLVALVLELADRGVRVICAGLDMDFRGEPFGIMPQLLARAEYVEKLFAVC 147
Query: 136 MSCFRDAAFTKR 147
C A T+R
Sbjct: 148 PVCGAPATRTQR 159
>gi|426405308|ref|YP_007024279.1| thymidine kinase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861976|gb|AFY03012.1| thymidine kinase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 204
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 91/198 (45%), Gaps = 58/198 (29%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV++G MFSGKT ELIRR+RR ++A + + + D RY+ V++HD LT + +
Sbjct: 14 EVVVGSMFSGKTEELIRRLRRAEFARLQIQVFKPIIDKRYNEMAVTSHD---LTTIDSTP 70
Query: 213 L-------NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+ N L P+TK V+GIDEGQF + Q
Sbjct: 71 IHDAEEIWNLLKPNTK---VVGIDEGQF-----------------FGQ------------ 98
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
++V A+ +A G V++A LD +Q F + +L+ +AE V
Sbjct: 99 ----------------NLVQIAQDLAERGLRVIIAGLDTDWQGKPFEPMPTLMAVAESVT 142
Query: 326 KLTAVCMSCFRDAAFTKR 343
K AVC+ C A T+R
Sbjct: 143 KQHAVCVVCGSPACRTQR 160
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 15/150 (10%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVEL-------NKLIPH 69
RR+RR ++A + + + D RY+ V +HD LT + + + N L P+
Sbjct: 28 LIRRLRRAEFARLQIQVFKPIIDKRYNEMAVTSHD---LTTIDSTPIHDAEEIWNLLKPN 84
Query: 70 TKDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
TK V+GIDEGQFF ++V A+ +A G V++A LD +Q F + +L+ +AE V
Sbjct: 85 TK---VVGIDEGQFFGQNLVQIAQDLAERGLRVIIAGLDTDWQGKPFEPMPTLMAVAESV 141
Query: 129 EKLTAVCMSCFRDAAFTKRI-GQEKEVILG 157
K AVC+ C A T+R G + +V++G
Sbjct: 142 TKQHAVCVVCGSPACRTQRTAGGDGQVLVG 171
>gi|260909415|ref|ZP_05916123.1| thymidine kinase [Prevotella sp. oral taxon 472 str. F0295]
gi|260636507|gb|EEX54489.1| thymidine kinase [Prevotella sp. oral taxon 472 str. F0295]
Length = 173
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R +A R I + A D RY E V +HD+ + + ++ + DIDV+GI
Sbjct: 11 RRMKRAVFAKQRVEIFKPAIDTRYSDEDVVSHDRNAIHCTPVDSSSAILLLSADIDVVGI 70
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V+VA LD F+ F + +L +A+ V K+ A+C+
Sbjct: 71 DEAQFMDEGLVDVCNELANRGVRVIVAGLDMDFKGVPFGPMPALCAIADQVTKVHAICVK 130
Query: 138 CFRDAAFTKRIGQ-EKEVILGPM 159
C A + RI + EK V++G M
Sbjct: 131 CGALAYVSHRIVEGEKRVLIGEM 153
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 46/195 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR++R +A R I + A D RY E V +HD+ + + ++
Sbjct: 1 MFSGKTEELIRRMKRAVFAKQRVEIFKPAIDTRYSDEDVVSHDRNAIHCTPVDSSSAILL 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
+ DIDV+GIDE QF++ + + VC E
Sbjct: 61 LSADIDVVGIDEAQFMD-----EGLVDVCNE----------------------------- 86
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
+AN G V+VA LD F+ F + +L +A+ V K+ A+C+ C A
Sbjct: 87 -----------LANRGVRVIVAGLDMDFKGVPFGPMPALCAIADQVTKVHAICVKCGALA 135
Query: 339 AFTKRIGQ-EKEVRI 352
+ RI + EK V I
Sbjct: 136 YVSHRIVEGEKRVLI 150
>gi|409198195|ref|ZP_11226858.1| thymidine kinase [Marinilabilia salmonicolor JCM 21150]
Length = 192
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR A R I + D RY ++V +HD + +
Sbjct: 17 EVIAGSMFSGKTEELLRRLRRAGIARQRVEIFKPMVDSRYSEDEVVSHDSNSIRSTPVES 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + ++DV+GIDE QF + ++VC +
Sbjct: 77 SGNILLLSSNVDVVGIDEAQFFD-----SNLLSVCNQ----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A G V+VA LD F+ F + +L+ AE V K+ A+CM
Sbjct: 109 -----------------LAGQGVRVIVAGLDMDFKGIPFGPMPALMASAEYVTKVHAICM 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
C A ++ R Q ++
Sbjct: 152 RCGDLAQYSLRKSQSDKL 169
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR A R I + D RY ++V +HD + + ++ + ++DV+GI
Sbjct: 33 RRLRRAGIARQRVEIFKPMVDSRYSEDEVVSHDSNSIRSTPVESSGNILLLSSNVDVVGI 92
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +++S +A G V+VA LD F+ F + +L+ AE V K+ A+CM
Sbjct: 93 DEAQFFDSNLLSVCNQLAGQGVRVIVAGLDMDFKGIPFGPMPALMASAEYVTKVHAICMR 152
Query: 138 CFRDAAFTKRIGQEKEVI 155
C A ++ R Q +++
Sbjct: 153 CGDLAQYSLRKSQSDKLV 170
>gi|374599474|ref|ZP_09672476.1| Thymidine kinase [Myroides odoratus DSM 2801]
gi|423324622|ref|ZP_17302463.1| hypothetical protein HMPREF9716_01820 [Myroides odoratimimus CIP
103059]
gi|373910944|gb|EHQ42793.1| Thymidine kinase [Myroides odoratus DSM 2801]
gi|404607879|gb|EKB07370.1| hypothetical protein HMPREF9716_01820 [Myroides odoratimimus CIP
103059]
Length = 203
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RY E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDTRYHDEYVVSHDSNEIRSTPVPT 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ + VC E
Sbjct: 77 ADSIRLLASGCDVVGIDEAQFFD-----DEIVNVCNE----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLAHYSYR 162
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A + I + A D RY E V +HD ++ + + + DV+GI
Sbjct: 33 RRLKRAQFAKQKVEIFKPAVDTRYHDEYVVSHDSNEIRSTPVPTADSIRLLASGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVNVCNELANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFTKRIGQEKEVIL 156
A ++ R +++
Sbjct: 153 TGNLAHYSYRKAASDAIVM 171
>gi|28210060|ref|NP_781004.1| thymidine kinase [Clostridium tetani E88]
gi|28202495|gb|AAO34941.1| thymidine kinase [Clostridium tetani E88]
Length = 203
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI GPM+SGK+ ELIRR+RR + A + + + D+RY E V +H K AV S
Sbjct: 22 EVITGPMYSGKSEELIRRVRRVKIAKQKVQVFKPEIDNRYSNEDVVSHCGDKEGAVPIKS 81
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ ++ KLI +D +V+ IDE QF +
Sbjct: 82 SEDILKLI--KEDTEVVAIDEAQFFD---------------------------------- 105
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++ +AN GK V+ A LD F+ F + +I +AE V K+ A
Sbjct: 106 -----------KGILEVVNKIANEGKRVICAGLDQDFKGEPFGYMPDIIAVAEFVHKVQA 154
Query: 330 VCMSCFRDAAFTKRI 344
VCM C A T+R+
Sbjct: 155 VCMICGNPATRTQRL 169
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR + A + + + D+RY E V +H K AV S+ ++ KLI +D +V
Sbjct: 38 RRVRRVKIAKQKVQVFKPEIDNRYSNEDVVSHCGDKEGAVPIKSSEDILKLI--KEDTEV 95
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF ++ +AN GK V+ A LD F+ F + +I +AE V K+ AV
Sbjct: 96 VAIDEAQFFDKGILEVVNKIANEGKRVICAGLDQDFKGEPFGYMPDIIAVAEFVHKVQAV 155
Query: 135 CMSCFRDAAFTKRI 148
CM C A T+R+
Sbjct: 156 CMICGNPATRTQRL 169
>gi|397904180|ref|ZP_10505101.1| Thymidine kinase [Caloramator australicus RC3]
gi|343178927|emb|CCC58000.1| Thymidine kinase [Caloramator australicus RC3]
Length = 191
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
E+I+GPM+SGK+ ELIRRI+R + A + + + + D+RY +V +H+ K A S
Sbjct: 11 EMIVGPMYSGKSEELIRRIKRAKIARQKVQVFKPSIDNRYSITEVVSHNGDKEGAHSVEN 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ E+ L+ ++D DVI IDE QF + D+ + VC++
Sbjct: 71 STEILNLV--SEDTDVIAIDEVQFFD-----DEIVEVCKK-------------------- 103
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+A+ GK V+ A LD F+ F + L+ +AE V+K+ A
Sbjct: 104 --------------------LADKGKRVICAGLDLDFRGEPFGPVPRLLAIAEFVDKIQA 143
Query: 330 VCMSCFRDAAFTKRI 344
+C+ C A T+R+
Sbjct: 144 ICVVCGNPATRTQRL 158
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDIDV 75
RRI+R + A + + + + D+RY +V +H+ K A S + E+ L+ ++D DV
Sbjct: 27 RRIKRAKIARQKVQVFKPSIDNRYSITEVVSHNGDKEGAHSVENSTEILNLV--SEDTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF D +V + +A+ GK V+ A LD F+ F + L+ +AE V+K+ A+
Sbjct: 85 IAIDEVQFFDDEIVEVCKKLADKGKRVICAGLDLDFRGEPFGPVPRLLAIAEFVDKIQAI 144
Query: 135 CMSCFRDAAFTKRI 148
C+ C A T+R+
Sbjct: 145 CVVCGNPATRTQRL 158
>gi|386819290|ref|ZP_10106506.1| thymidine kinase [Joostella marina DSM 19592]
gi|386424396|gb|EIJ38226.1| thymidine kinase [Joostella marina DSM 19592]
Length = 227
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 88/193 (45%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A R I + A D RYD E V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFARQRVEIFKPAVDVRYDDEMVVSHDANEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ DV+GIDE QF + D+ ++VC +
Sbjct: 77 AANIRLL--ADGCDVVGIDEAQFFD-----DEIVSVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G VVVA LD F+ F + +L+ AE V K+ A+
Sbjct: 109 -------------------LANKGIRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVHAI 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLANYSFR 162
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R Q+A R I + A D RYD E V +HD ++ T V A +L+
Sbjct: 30 ELIRRLKRAQFARQRVEIFKPAVDVRYDDEMVVSHDANEIRSTPVPAAANIRLL--ADGC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFF D +VS +AN G VVVA LD F+ F + +L+ AE V K+
Sbjct: 88 DVVGIDEAQFFDDEIVSVCNDLANKGIRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFT-KRIGQEKEVILG 157
A+C A ++ ++ +K V+LG
Sbjct: 148 AICTRTGNLANYSFRKSTNDKLVLLG 173
>gi|365959349|ref|YP_004940916.1| thymidine kinase [Flavobacterium columnare ATCC 49512]
gi|365736030|gb|AEW85123.1| thymidine kinase [Flavobacterium columnare ATCC 49512]
Length = 208
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 83/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + + D RY E V +H++ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSIDTRYHEEMVVSHNKNEIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF +
Sbjct: 77 AANIRILAQGCDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++VS +ANAG V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 100 --------EEIVSVCNDLANAGVRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 KTGNLAHYSHR 162
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + + D RY E V +H++ ++ + + + DV+GI
Sbjct: 33 RRLRRAQFAKQKVEIFKPSIDTRYHEEMVVSHNKNEIRSTPVPAAANIRILAQGCDVVGI 92
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++VS +ANAG V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDEEIVSVCNDLANAGVRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTK 152
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
A ++ R + V+LG
Sbjct: 153 TGNLAHYSHRKTANDSLVLLG 173
>gi|255536697|ref|YP_003097068.1| thymidine kinase [Flavobacteriaceae bacterium 3519-10]
gi|255342893|gb|ACU09006.1| Thymidine kinase [Flavobacteriaceae bacterium 3519-10]
Length = 196
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 81/192 (42%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A I + D RY E+V +H+Q K+ +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAEMAGQNVEIFKPKLDTRYAEEEVVSHNQNKIRSTPVES 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
N+++ DV+GIDE QF +
Sbjct: 77 PNEILLLGSTCDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN+G VV+A LD F F I +L+ AE V K+ A+C
Sbjct: 100 --------ESIVEVANKLANSGIRVVIAGLDMDFMGRPFGPIPNLMATAEYVTKVHAICR 151
Query: 333 SCFRDAAFTKRI 344
A + RI
Sbjct: 152 RTGNLANHSMRI 163
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR+RR + A I + D RY E+V +H+Q K+ + N+++ DV+
Sbjct: 31 LIRRLRRAEMAGQNVEIFKPKLDTRYAEEEVVSHNQNKIRSTPVESPNEILLLGSTCDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +V A +AN+G VV+A LD F F I +L+ AE V K+ A+C
Sbjct: 91 GIDEAQFFDESIVEVANKLANSGIRVVIAGLDMDFMGRPFGPIPNLMATAEYVTKVHAIC 150
Query: 136 MSCFRDAAFTKRI 148
A + RI
Sbjct: 151 RRTGNLANHSMRI 163
>gi|315606357|ref|ZP_07881373.1| thymidine kinase [Prevotella buccae ATCC 33574]
gi|402308703|ref|ZP_10827707.1| thymidine kinase [Prevotella sp. MSX73]
gi|315252048|gb|EFU32021.1| thymidine kinase [Prevotella buccae ATCC 33574]
gi|400375154|gb|EJP28064.1| thymidine kinase [Prevotella sp. MSX73]
Length = 224
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + + D RY E + +HD+ + + L+ DIDV+GI
Sbjct: 54 RRMKRAKFARQKVEIFKPSIDTRYSDEDIVSHDRTSIRSTPIDSSGSLLLLASDIDVVGI 113
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +VS +AN G V++A LD FQ F I +L +A+ V K+ A+C+
Sbjct: 114 DEAQFFDDGLVSVCNQLANRGVRVIIAGLDMDFQGLPFGPIPALCAIADDVTKVHAICVK 173
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + ++ V+LG
Sbjct: 174 CGALAYVSHRLVHNDRRVLLG 194
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R ++A + I + + D RY E + +HD+ + +
Sbjct: 38 EVVCGSMFSGKTEELIRRMKRAKFARQKVEIFKPSIDTRYSDEDIVSHDRTSIRSTPIDS 97
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+ DIDV+GIDE QF + D ++VC +
Sbjct: 98 SGSLLLLASDIDVVGIDEAQFFD-----DGLVSVCNQ----------------------- 129
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD FQ F I +L +A+ V K+ A+C+
Sbjct: 130 -----------------LANRGVRVIIAGLDMDFQGLPFGPIPALCAIADDVTKVHAICV 172
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 173 KCGALAYVSHRL 184
>gi|7674111|sp|Q9ZIG2.1|KITH_RHOSI RecName: Full=Thymidine kinase
gi|4090937|gb|AAC98909.1| thymidine kinase [Rhodothermus sp. 'ITI 518']
Length = 213
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 81/196 (41%), Gaps = 45/196 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q A R + + D RY V +HD+ L +
Sbjct: 18 EVICGSMFSGKTEELIRRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRSTPVDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ DV+GIDE QF ++
Sbjct: 78 AEQILLLADSADVVGIDEAQFFDMT----------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V + +AN GK V+VA LD + + + +AE V KL A+C
Sbjct: 103 ----------LVDVCQQLANDGKRVIVAGLDQEYMGRPLEPMPQFMAVAEYVTKLHAICA 152
Query: 333 SCFRDAAFTKRIGQEK 348
C A ++R+ E+
Sbjct: 153 VCGAPANHSQRLTDEE 168
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q A R + + D RY V +HD+ L + +++ DV+GI
Sbjct: 34 RRLRRAQIARQRVEVFKPRMDRRYSETDVVSHDENALRSTPVDSAEQILLLADSADVVGI 93
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V + +AN GK V+VA LD + + + +AE V KL A+C
Sbjct: 94 DEAQFFDMTLVDVCQQLANDGKRVIVAGLDQEYMGRPLEPMPQFMAVAEYVTKLHAICAV 153
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A ++R+ +E V+LG
Sbjct: 154 CGAPANHSQRLTDEEGRVVLG 174
>gi|160916059|ref|ZP_02078266.1| hypothetical protein EUBDOL_02086 [Eubacterium dolichum DSM 3991]
gi|158431783|gb|EDP10072.1| thymidine kinase [Eubacterium dolichum DSM 3991]
Length = 191
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GK+ ELIRRI+ +YA+ R I + A D RY + +H+ +++ + +
Sbjct: 11 EVITGCMFAGKSEELIRRIKTLEYAHKRIAIFKPAIDKRYSDAYIVSHNGKRVKSFVISK 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + + D DV+ IDE QF +
Sbjct: 71 AEEIYAYMQEDYDVVAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V +AN GK V+VA LD F+ F + +L+ AE V KLTAVC
Sbjct: 95 ---------EEIVKICNELANQGKRVIVAGLDMDFRGEPFKVMPALLATAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRI 344
M C A ++R+
Sbjct: 146 MKCGAPATRSQRL 158
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI+ +YA+ R I + A D RY + +H+ +++ + + ++ + + D DV+
Sbjct: 27 RRIKTLEYAHKRIAIFKPAIDKRYSDAYIVSHNGKRVKSFVISKAEEIYAYMQEDYDVVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V +AN GK V+VA LD F+ F + +L+ AE V KLTAVCM
Sbjct: 87 IDEVQFFDEEIVKICNELANQGKRVIVAGLDMDFRGEPFKVMPALLATAEFVTKLTAVCM 146
Query: 137 SCFRDAAFTKRI 148
C A ++R+
Sbjct: 147 KCGAPATRSQRL 158
>gi|288926028|ref|ZP_06419957.1| thymidine kinase [Prevotella buccae D17]
gi|288337248|gb|EFC75605.1| thymidine kinase [Prevotella buccae D17]
Length = 202
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + + D RY E + +HD+ + + L+ DIDV+GI
Sbjct: 32 RRMKRAKFARQKVEIFKPSIDTRYSDEDIVSHDRTSIRSTPIDSSGSLLLLASDIDVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +VS +AN G V++A LD FQ F I +L +A+ V K+ A+C+
Sbjct: 92 DEAQFFDDGLVSVCNQLANRGVRVIIAGLDMDFQGLPFGPIPALCAIADDVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + ++ V+LG
Sbjct: 152 CGALAYVSHRLVHNDRRVLLG 172
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R ++A + I + + D RY E + +HD+ + +
Sbjct: 16 EVVCGSMFSGKTEELIRRMKRAKFARQKVEIFKPSIDTRYSDEDIVSHDRTSIRSTPIDS 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+ DIDV+GIDE QF + D ++VC +
Sbjct: 76 SGSLLLLASDIDVVGIDEAQFFD-----DGLVSVCNQ----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD FQ F I +L +A+ V K+ A+C+
Sbjct: 108 -----------------LANRGVRVIIAGLDMDFQGLPFGPIPALCAIADDVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 KCGALAYVSHRL 162
>gi|23100454|ref|NP_693921.1| thymidine kinase [Oceanobacillus iheyensis HTE831]
gi|38372365|sp|Q8EM59.1|KITH_OCEIH RecName: Full=Thymidine kinase
gi|22778687|dbj|BAC14955.1| thymidine kinase [Oceanobacillus iheyensis HTE831]
Length = 207
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR+RR YA+ + + A DDRYD + + +HD T+ A
Sbjct: 11 ELICGSMFSGKSEELIRRVRRATYAHINVRVYKPAIDDRYDDKAIVSHDG---TSTMARP 67
Query: 213 LNKLIPHTKDID----VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
++ + +D+D ++GIDE QF +
Sbjct: 68 IHDAVEILEDVDNNVEIVGIDEVQFFD--------------------------------- 94
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
+VV E +A+ G V+VA LD F+ F + ++ LAE V KL
Sbjct: 95 ------------NNVVDVIEELADRGIRVIVAGLDLDFRGEPFEPVPKIMALAESVTKLN 142
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A+ T+R+
Sbjct: 143 AICPICGSPASRTQRL 158
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDID-- 74
RR+RR YA+ + + A DDRYD + + +HD T+ A ++ + +D+D
Sbjct: 25 LIRRVRRATYAHINVRVYKPAIDDRYDDKAIVSHDG---TSTMARPIHDAVEILEDVDNN 81
Query: 75 --VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
++GIDE QFF + VV E +A+ G V+VA LD F+ F + ++ LAE V KL
Sbjct: 82 VEIVGIDEVQFFDNNVVDVIEELADRGIRVIVAGLDLDFRGEPFEPVPKIMALAESVTKL 141
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A+ T+R+
Sbjct: 142 NAICPICGSPASRTQRL 158
>gi|156348392|ref|XP_001621833.1| hypothetical protein NEMVEDRAFT_v1g221517 [Nematostella vectensis]
gi|156208118|gb|EDO29733.1| predicted protein [Nematostella vectensis]
Length = 198
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + + D RYD E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPSVDTRYDEEMVVSHDANEIRSTPVPL 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ ++VC +
Sbjct: 77 AGNIRILAQGCDVVGIDEAQFFD-----DEIVSVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANSGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR++R Q+A + I + + D RYD E V +HD ++ + + + DV
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPSVDTRYDEEMVVSHDANEIRSTPVPLAGNIRILAQGCDV 89
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF D +VS +AN+G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 90 VGIDEAQFFDDEIVSVCNDLANSGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAV 149
Query: 135 CMSCFRDAAFT-KRIGQEKEVILG 157
C A ++ ++ +K V+LG
Sbjct: 150 CTRTGNLANYSFRKTENDKLVMLG 173
>gi|340622824|ref|YP_004741276.1| thymidine kinase [Capnocytophaga canimorsus Cc5]
gi|339903090|gb|AEK24169.1| Thymidine kinase [Capnocytophaga canimorsus Cc5]
Length = 239
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 103/243 (42%), Gaps = 53/243 (21%)
Query: 115 FNDILSLIPLAEC-VEKLTAVC------MSCFRDAAFTKRIGQEKEVILGPMFSGKTTEL 167
+N ILSL+ ++K T C M ++++ G EVI G MFSGKT EL
Sbjct: 18 YNTILSLLVKNPSEIQKNTYFCEQYNSIMFLENTTNYSEKFGW-IEVICGSMFSGKTEEL 76
Query: 168 IRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIG 227
IRR+RR Q+A + I + A D RYD V +H+ ++ + ++ DVIG
Sbjct: 77 IRRLRRAQFAKQKVEIFKPAFDTRYDDVMVVSHNANEIRSTPVPAAANIMLLADGCDVIG 136
Query: 228 IDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFA 287
IDE QF + D+ + VC +
Sbjct: 137 IDEAQFFD-----DEIVTVCND-------------------------------------- 153
Query: 288 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQE 347
+AN G V+VA LD F+ F + +L+ AE V K+ AVC A F+ R
Sbjct: 154 --LANRGMRVIVAGLDMDFKGKPFGPMPALMATAEYVTKVHAVCTRTGNLANFSYRKSAN 211
Query: 348 KEV 350
+ V
Sbjct: 212 ENV 214
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + A D RYD V +H+ ++ + ++ DVIGI
Sbjct: 78 RRLRRAQFAKQKVEIFKPAFDTRYDDVMVVSHNANEIRSTPVPAAANIMLLADGCDVIGI 137
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 138 DEAQFFDDEIVTVCNDLANRGMRVIVAGLDMDFKGKPFGPMPALMATAEYVTKVHAVCTR 197
Query: 138 CFRDAAFTKRIGQEKEVIL 156
A F+ R + V L
Sbjct: 198 TGNLANFSYRKSANENVFL 216
>gi|395802215|ref|ZP_10481468.1| thymidine kinase [Flavobacterium sp. F52]
gi|395435456|gb|EJG01397.1| thymidine kinase [Flavobacterium sp. F52]
Length = 227
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 83/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A R I + A D RY E V +HD ++ +
Sbjct: 48 EVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPAIDTRYHDEMVVSHDANEIRSTPVPA 107
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + DVIGIDE QF + D+ + VC +
Sbjct: 108 AANIMILAQGCDVIGIDEAQFFD-----DEIITVCND----------------------- 139
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + L+ AE V K+ AVC
Sbjct: 140 -----------------LANQGIRVIVAGLDMDFKGNPFGPMPGLMATAEYVTKVHAVCT 182
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 183 RTGNLANYSFR 193
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A R I + A D RY E V +HD ++ + ++ + DVIGI
Sbjct: 64 RRLKRAQFAKQRVEIFKPAIDTRYHDEMVVSHDANEIRSTPVPAAANIMILAQGCDVIGI 123
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +++ +AN G V+VA LD F+ F + L+ AE V K+ AVC
Sbjct: 124 DEAQFFDDEIITVCNDLANQGIRVIVAGLDMDFKGNPFGPMPGLMATAEYVTKVHAVCTR 183
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ ++ +K V+LG
Sbjct: 184 TGNLANYSFRKTDNDKLVMLG 204
>gi|15616341|ref|NP_244646.1| thymidine kinase [Bacillus halodurans C-125]
gi|20138749|sp|Q9K6F0.1|KITH_BACHD RecName: Full=Thymidine kinase
gi|10176404|dbj|BAB07498.1| thymidine kinase [Bacillus halodurans C-125]
Length = 204
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Y + + + A D+RY ++V +H+ K+ A+
Sbjct: 11 EVICGSMFSGKSEELIRRVRRATYGRLKVQVFKPAIDNRYSEQEVVSHNGNKVCAIPVER 70
Query: 213 -LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ L ++D D++ IDE QF +
Sbjct: 71 AMSILEQWSEDTDIVAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
DV+ + +A+ G V+ A LD F+ F +L+ +AE V KL A+C
Sbjct: 95 ---------EDVIGVVDYLADHGVRVICAGLDQDFRGEPFEPTRTLMAMAEYVTKLQAIC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 PVCGSPASRTQRL 158
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-LNKLIPHTKDIDVIG 77
RR+RR Y + + + A D+RY ++V +H+ K+ A+ ++ L ++D D++
Sbjct: 27 RRVRRATYGRLKVQVFKPAIDNRYSEQEVVSHNGNKVCAIPVERAMSILEQWSEDTDIVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF DV+ + +A+ G V+ A LD F+ F +L+ +AE V KL A+C
Sbjct: 87 IDEVQFFDEDVIGVVDYLADHGVRVICAGLDQDFRGEPFEPTRTLMAMAEYVTKLQAICP 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|297588390|ref|ZP_06947033.1| thymidine kinase [Finegoldia magna ATCC 53516]
gi|297573763|gb|EFH92484.1| thymidine kinase [Finegoldia magna ATCC 53516]
Length = 210
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 44/194 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R++ A Y ++ + D RY EKV THD+ ++ A++ ++ +
Sbjct: 13 GSMFSGKTSSLWKEVNRFKIAKYNVVVFKPKMDSRYSKEKVVTHDKNEIEAINVDNIDDI 72
Query: 217 IPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ +TK D++VI IDE QF+
Sbjct: 73 VEYTKTHDVNVIAIDEVQFIN--------------------------------------- 93
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
F +++ + G ++ A LD ++ F + L+P+ + VEK AVC C
Sbjct: 94 SKADHFVKQINY---LLEKGFTIIAAGLDMDYKAKPFQLVKELLPICDYVEKHHAVCAVC 150
Query: 335 FRDAAFTKRIGQEK 348
DA + RI +K
Sbjct: 151 GNDAWVSYRISDDK 164
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DID 74
+ + R++ A Y ++ + D RY EKV THD+ ++ A++ ++ ++ +TK D++
Sbjct: 23 LWKEVNRFKIAKYNVVVFKPKMDSRYSKEKVVTHDKNEIEAINVDNIDDIVEYTKTHDVN 82
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
VI IDE QF V + G ++ A LD ++ F + L+P+ + VEK
Sbjct: 83 VIAIDEVQFINSKADHFVKQINYLLEKGFTIIAAGLDMDYKAKPFQLVKELLPICDYVEK 142
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVI 155
AVC C DA + RI +K I
Sbjct: 143 HHAVCAVCGNDAWVSYRISDDKNRI 167
>gi|108763197|ref|YP_633226.1| thymidine kinase [Myxococcus xanthus DK 1622]
gi|108467077|gb|ABF92262.1| thymidine kinase [Myxococcus xanthus DK 1622]
Length = 199
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 91/205 (44%), Gaps = 53/205 (25%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
F K IG EVI G MFSGKT ELIRR++R Y + + + D+RYD V +H Q
Sbjct: 4 FPKDIGW-IEVICGSMFSGKTEELIRRVQRAVYGKQKVQVFKPRIDNRYDESAVVSHSQH 62
Query: 204 KL--TAVSAVE--LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
K+ TA+ E +L P D V+GIDE QF GS
Sbjct: 63 KVLSTAIERAEEIFYRLAP---DTQVVGIDEVQFF----GS------------------- 96
Query: 260 SPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 319
+VV+ E++AN G V+ A LD +Q F + L+
Sbjct: 97 ----------------------EVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLMA 134
Query: 320 LAECVEKLTAVCMSCFRDAAFTKRI 344
++E V K A+C+ C A ++RI
Sbjct: 135 VSEYVTKELAICVVCGNPANRSQRI 159
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVE--LNKLIPHTKDID 74
RR++R Y + + + D+RYD V +H Q K+ TA+ E +L P D
Sbjct: 28 RRVQRAVYGKQKVQVFKPRIDNRYDESAVVSHSQHKVLSTAIERAEEIFYRLAP---DTQ 84
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF +VV+ E++AN G V+ A LD +Q F + L+ ++E V K A
Sbjct: 85 VVGIDEVQFFGSEVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLMAVSEYVTKELA 144
Query: 134 VCMSCFRDAAFTKRIGQEKE-VILG 157
+C+ C A ++RI E V++G
Sbjct: 145 ICVVCGNPANRSQRIVSSGERVVVG 169
>gi|304383624|ref|ZP_07366083.1| thymidine kinase [Prevotella marshii DSM 16973]
gi|304335148|gb|EFM01419.1| thymidine kinase [Prevotella marshii DSM 16973]
Length = 200
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D+RY E V +HD+ + ++ + DIDV+GI
Sbjct: 32 RRLKRAKFARQKVEIFKPAIDNRYSEEDVVSHDRHAIHCTPIDSSASILLLSSDIDVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +VS +A G V++A LD F+ F + +L +A+ V K+ A+C+
Sbjct: 92 DEAQFFDDNLVSICNRLAYRGVRVIIAGLDMDFKGVPFGPMPALCAIADEVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + EK V+LG
Sbjct: 152 CGALAYVSHRTVDNEKRVLLG 172
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 46/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D+RY E V +HD+ +
Sbjct: 16 EVICGSMFSGKTEELIRRLKRAKFARQKVEIFKPAIDNRYSEEDVVSHDRHAIHCTPIDS 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + DIDV+GIDE QF +
Sbjct: 76 SASILLLSSDIDVVGIDEAQFFD------------------------------------- 98
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++VS +A G V++A LD F+ F + +L +A+ V K+ A+C+
Sbjct: 99 --------DNLVSICNRLAYRGVRVIIAGLDMDFKGVPFGPMPALCAIADEVTKVHAICV 150
Query: 333 SCFRDAAFTKR-IGQEKEV 350
C A + R + EK V
Sbjct: 151 KCGALAYVSHRTVDNEKRV 169
>gi|288929636|ref|ZP_06423480.1| thymidine kinase [Prevotella sp. oral taxon 317 str. F0108]
gi|288329141|gb|EFC67728.1| thymidine kinase [Prevotella sp. oral taxon 317 str. F0108]
Length = 202
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R +A R I + A D R+ + V +HD+ +
Sbjct: 22 EVICGSMFSGKTEELIRRMKRAVFAKQRVEIFKPAIDTRFSEDDVVSHDRNAIHCTPVDS 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + DIDV+GIDE QF++ + + VC E
Sbjct: 82 SAAILLLSADIDVVGIDEAQFMD-----EGLVPVCNE----------------------- 113
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L +A+ V K+ A+C+
Sbjct: 114 -----------------LANRGVRVIVAGLDMDFKGVPFGPMPALCAIADHVTKVHAICV 156
Query: 333 SCFRDAAFTKRI 344
C A + RI
Sbjct: 157 KCGALAYVSHRI 168
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R +A R I + A D R+ + V +HD+ + ++ + DIDV+GI
Sbjct: 38 RRMKRAVFAKQRVEIFKPAIDTRFSEDDVVSHDRNAIHCTPVDSSAAILLLSADIDVVGI 97
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +AN G V+VA LD F+ F + +L +A+ V K+ A+C+
Sbjct: 98 DEAQFMDEGLVPVCNELANRGVRVIVAGLDMDFKGVPFGPMPALCAIADHVTKVHAICVK 157
Query: 138 CFRDAAFTKRIGQ-EKEVILGPM 159
C A + RI + EK V+LG M
Sbjct: 158 CGALAYVSHRIVEGEKRVMLGEM 180
>gi|218960737|ref|YP_001740512.1| thymidine kinase [Candidatus Cloacamonas acidaminovorans]
gi|167729394|emb|CAO80305.1| thymidine kinase [Candidatus Cloacamonas acidaminovorans str. Evry]
Length = 187
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 46/198 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRRIRR +YA + ++ + D+RYD + +H Q + ++
Sbjct: 13 EVICGSMFSGKTEELIRRIRRAEYAKQKVLVFKPVIDNRYDANNIVSHSQMQAPSIPINA 72
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + D+ +I IDE QF +
Sbjct: 73 PGEIYSYLDDDVKIIAIDEAQFFD------------------------------------ 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
P +V +A+ G V+VA LD ++ F + L+ +AE + K A+C
Sbjct: 97 ---------PSLVGICNDLADRGYRVIVAGLDQDYKGEPFGSMPQLMAIAEYITKNLAIC 147
Query: 332 MSCFRDAAFTKRIGQEKE 349
+ C A T+R + E
Sbjct: 148 VVCGNPANRTQRTIHKDE 165
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRIRR +YA + ++ + D+RYD + +H Q + ++ ++ + D + +I
Sbjct: 29 RRIRRAEYAKQKVLVFKPVIDNRYDANNIVSHSQMQAPSIPINAPGEIYSYLDDDVKIIA 88
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF P +V +A+ G V+VA LD ++ F + L+ +AE + K A+C+
Sbjct: 89 IDEAQFFDPSLVGICNDLADRGYRVIVAGLDQDYKGEPFGSMPQLMAIAEYITKNLAICV 148
Query: 137 SCFRDAAFTKR-IGQEKEVILG 157
C A T+R I +++++++G
Sbjct: 149 VCGNPANRTQRTIHKDEQILVG 170
>gi|379003731|ref|YP_005259403.1| thymidine kinase [Pyrobaculum oguniense TE7]
gi|375159184|gb|AFA38796.1| Thymidine kinase [Pyrobaculum oguniense TE7]
Length = 185
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 88/198 (44%), Gaps = 56/198 (28%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA------ 207
VI+GPMF+GKTTELIRR+ RY A R ++ + + D RYD+ KV+ H+ K A
Sbjct: 4 VIVGPMFAGKTTELIRRVERYVIAGKRAIVFKPSIDARYDSSKVAAHNGLKFGAYVVPPD 63
Query: 208 -VSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
V + KL D DV+ +DE QF
Sbjct: 64 EVGVETIGKL---GLDYDVVAVDEVQFF-------------------------------- 88
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
PP DV++ +A+ G++V+ A L+ F+ F + + A+ V
Sbjct: 89 ----------PPRLADVLN---ELAD-GRVVIAAGLNLDFRGEPFETTMRAMAFADKVIS 134
Query: 327 LTAVCMSCFRDAAFTKRI 344
LTAVC C R A T+R+
Sbjct: 135 LTAVCKVCGRPATRTQRL 152
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-------VSAVELNKLIP 68
RR+ RY A R ++ + + D RYD+ KVA H+ K A V + KL
Sbjct: 16 ELIRRVERYVIAGKRAIVFKPSIDARYDSSKVAAHNGLKFGAYVVPPDEVGVETIGKL-- 73
Query: 69 HTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
D DV+ +DE QFFP ++ + G++V+ A L+ F+ F + + A+ V
Sbjct: 74 -GLDYDVVAVDEVQFFPPRLADVLNELADGRVVIAAGLNLDFRGEPFETTMRAMAFADKV 132
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
LTAVC C R A T+R+
Sbjct: 133 ISLTAVCKVCGRPATRTQRL 152
>gi|390942223|ref|YP_006405984.1| thymidine kinase [Belliella baltica DSM 15883]
gi|390415651|gb|AFL83229.1| thymidine kinase [Belliella baltica DSM 15883]
Length = 194
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R A + I + + D RY V +H++ + +
Sbjct: 20 EVICGSMFSGKTEELIRRLNRALIAKQKVEIFKPSIDKRYHELDVVSHNENAIRSTPVNF 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ D DV+GIDE QF +
Sbjct: 80 AEDILLLAGDCDVVGIDEVQFFD------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN GK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 103 --------NHIVHIANVLANGGKRVILAGLDMDFEGKAFEPMPQLLAIAEYVTKVHAICM 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A+++ R+ K+
Sbjct: 155 KCGDLASYSYRLSDTKD 171
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + + D RY V +H++ + + ++ D DV+GI
Sbjct: 36 RRLNRALIAKQKVEIFKPSIDKRYHELDVVSHNENAIRSTPVNFAEDILLLAGDCDVVGI 95
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V A +AN GK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 96 DEVQFFDNHIVHIANVLANGGKRVILAGLDMDFEGKAFEPMPQLLAIAEYVTKVHAICMK 155
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C A+++ R+ K+ V+LG
Sbjct: 156 CGDLASYSYRLSDTKDKVMLG 176
>gi|328950908|ref|YP_004368243.1| thymidine kinase [Marinithermus hydrothermalis DSM 14884]
gi|328451232|gb|AEB12133.1| Thymidine kinase [Marinithermus hydrothermalis DSM 14884]
Length = 201
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I+GPMFSGK+ ELIRR++R A R + + DDRY V +HD ++ AV+ +
Sbjct: 12 EAIVGPMFSGKSEELIRRVKRALIAGQRVQVFKPRLDDRYHASDVVSHDGTRVEAVAVAD 71
Query: 213 LNKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L +D V+ +DE QF +
Sbjct: 72 SRELRARLQDPLPQVVAVDEVQFFDA---------------------------------- 97
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+V + G V+VA LD F+ F I L+ AE VEKL+AV
Sbjct: 98 -----------GLVELVMELTEQGVRVIVAGLDLDFRGEPFGIIPELLARAEWVEKLSAV 146
Query: 331 CMSCFRDAAFTKRI 344
C C R A T+R+
Sbjct: 147 CPRCGRAATRTQRL 160
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI--D 74
RR++R A R + + DDRY V +HD ++ AV+ + +L +D
Sbjct: 26 LIRRVKRALIAGQRVQVFKPRLDDRYHASDVVSHDGTRVEAVAVADSRELRARLQDPLPQ 85
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+ +DE QFF +V + G V+VA LD F+ F I L+ AE VEKL+A
Sbjct: 86 VVAVDEVQFFDAGLVELVMELTEQGVRVIVAGLDLDFRGEPFGIIPELLARAEWVEKLSA 145
Query: 134 VCMSCFRDAAFTKRI 148
VC C R A T+R+
Sbjct: 146 VCPRCGRAATRTQRL 160
>gi|172058727|ref|YP_001815187.1| thymidine kinase [Exiguobacterium sibiricum 255-15]
gi|171991248|gb|ACB62170.1| Thymidine kinase [Exiguobacterium sibiricum 255-15]
Length = 206
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS-AV 211
EVI G MFSGK+ ELIRR+RR QY + + A DDRY E V +H + A+ A
Sbjct: 12 EVICGSMFSGKSEELIRRVRRAQYGKLPVQVFKPAIDDRYHEEHVVSHVGNSVIAIPMAT 71
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ ++ ++ IDE QF +
Sbjct: 72 SRDVYAAVAEETQIVAIDEVQFFD------------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V+ E++A GK V+ A LD F+ F + L+ AE V KL A+C
Sbjct: 96 ---------DEIVAVIEALAQDGKRVICAGLDQDFRAEPFGKMPELLARAEFVTKLQAIC 146
Query: 332 MSCFRDAAFTKRI 344
+SC A+ T+R+
Sbjct: 147 LSCGDPASRTQRL 159
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS-AVELNKLIPHTKDIDVIG 77
RR+RR QY + + A DDRY E V +H + A+ A + ++ ++
Sbjct: 28 RRVRRAQYGKLPVQVFKPAIDDRYHEEHVVSHVGNSVIAIPMATSRDVYAAVAEETQIVA 87
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D +V+ E++A GK V+ A LD F+ F + L+ AE V KL A+C+
Sbjct: 88 IDEVQFFDDEIVAVIEALAQDGKRVICAGLDQDFRAEPFGKMPELLARAEFVTKLQAICL 147
Query: 137 SCFRDAAFTKRI 148
SC A+ T+R+
Sbjct: 148 SCGDPASRTQRL 159
>gi|282859353|ref|ZP_06268461.1| thymidine kinase [Prevotella bivia JCVIHMP010]
gi|424900693|ref|ZP_18324235.1| thymidine kinase [Prevotella bivia DSM 20514]
gi|282587838|gb|EFB93035.1| thymidine kinase [Prevotella bivia JCVIHMP010]
gi|388592893|gb|EIM33132.1| thymidine kinase [Prevotella bivia DSM 20514]
Length = 200
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + + D RY E+V +HD+ + +
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPSIDVRYSDEEVVSHDRNTIHSTPIDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DI+V+GIDE QF +
Sbjct: 78 SESILLLASDIEVVGIDEAQFFD------------------------------------- 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+++ ++AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 101 --------EGLINVCNTLANNGVRVIIAGLDMDFKGVPFGPIPALCAIADDVTKVHAICV 152
Query: 333 SCFRDAAFTKRIGQ 346
C A + R+ Q
Sbjct: 153 KCGALAYLSHRLVQ 166
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + + D RY E+V +HD+ + + ++ DI+V+GI
Sbjct: 34 RRMKRAKFAKQKVEIFKPSIDVRYSDEEVVSHDRNTIHSTPIDSSESILLLASDIEVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +++ ++AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFFDEGLINVCNTLANNGVRVIIAGLDMDFKGVPFGPIPALCAIADDVTKVHAICVK 153
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C A + R+ Q V+LG
Sbjct: 154 CGALAYLSHRLVQNNHRVLLG 174
>gi|288800742|ref|ZP_06406199.1| thymidine kinase [Prevotella sp. oral taxon 299 str. F0039]
gi|288332203|gb|EFC70684.1| thymidine kinase [Prevotella sp. oral taxon 299 str. F0039]
Length = 200
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + + D RY E+V +HD+ + +
Sbjct: 22 EVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPSIDTRYSEEEVVSHDKTSIKSTPVDA 81
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + DI+V+GIDE QF + + + VC +
Sbjct: 82 SGSILLLSSDIEVVGIDEAQFFD-----ESLVDVCNQ----------------------- 113
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD F+ F + +L +A+ V K+ A+C+
Sbjct: 114 -----------------LANKGVRVIIAGLDMDFKGIPFGPMPALCAIADDVTKVHAICV 156
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 157 KCGALAYVSHRL 168
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + + D RY E+V +HD+ + + ++ + DI+V+GI
Sbjct: 38 RRLKRAKFAKQKVEIFKPSIDTRYSEEEVVSHDKTSIKSTPVDASGSILLLSSDIEVVGI 97
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V +AN G V++A LD F+ F + +L +A+ V K+ A+C+
Sbjct: 98 DEAQFFDESLVDVCNQLANKGVRVIIAGLDMDFKGIPFGPMPALCAIADDVTKVHAICVK 157
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + E+ V+LG
Sbjct: 158 CGALAYVSHRLVENERRVLLG 178
>gi|60594475|pdb|1XX6|A Chain A, X-Ray Structure Of Clostridium Acetobutylicum Thymidine
Kinase With Adp. Northeast Structural Genomics Target
Car26.
gi|60594476|pdb|1XX6|B Chain B, X-Ray Structure Of Clostridium Acetobutylicum Thymidine
Kinase With Adp. Northeast Structural Genomics Target
Car26
Length = 191
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRIRR + A + + + D+RY E V +H +K AV+ +++ + +D +VI
Sbjct: 27 RRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHXGEKEQAVAIKNSREILKYFEEDTEVIA 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D +V +A +G+ V+ A LD F+ F I L +AE V+K+ A+C+
Sbjct: 87 IDEVQFFDDEIVEIVNKIAESGRRVICAGLDXDFRGKPFGPIPELXAIAEFVDKIQAICV 146
Query: 137 SCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIV 184
C A T+R+ K P F LI Y+ +C +V
Sbjct: 147 VCGNPATRTQRLINGK-----PAFYDDPVVLIGAXESYEARCRKCHVV 189
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GP +SGK+ ELIRRIRR + A + + + D+RY E V +H +K AV+
Sbjct: 11 EVIVGPXYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHXGEKEQAVAIKN 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + +D +VI IDE QF +
Sbjct: 71 SREILKYFEEDTEVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V +A +G+ V+ A LD F+ F I L +AE V+K+ A+C
Sbjct: 95 ---------DEIVEIVNKIAESGRRVICAGLDXDFRGKPFGPIPELXAIAEFVDKIQAIC 145
Query: 332 MSCFRDAAFTKRI 344
+ C A T+R+
Sbjct: 146 VVCGNPATRTQRL 158
>gi|120437676|ref|YP_863362.1| thymidine kinase [Gramella forsetii KT0803]
gi|117579826|emb|CAL68295.1| thymidine kinase [Gramella forsetii KT0803]
Length = 215
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 83/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A I + A D RYD E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKFAKQNVEIFKPAIDTRYDEEMVVSHDSNEIRSTPVPS 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ + VC +
Sbjct: 77 ASNIRLLADGCDVVGIDEAQFFD-----DEIVTVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGVRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A F+ R
Sbjct: 152 RTGNLAQFSYR 162
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 9/191 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR++R ++A I + A D RYD E V +HD ++ + + + DV
Sbjct: 30 ELIRRLKRAKFAKQNVEIFKPAIDTRYDEEMVVSHDSNEIRSTPVPSASNIRLLADGCDV 89
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 90 VGIDEAQFFDDEIVTVCNDLANRGVRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAV 149
Query: 135 CMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMI-VRYAKDDRYD 193
C A F+ R +++ F G+ E + R Y Y+ M+ R K D D
Sbjct: 150 CTRTGNLAQFSYRKAINDDLV----FLGENEEY-EPLSRAAY--YKAMLRERVRKLDVND 202
Query: 194 TEKVSTHDQQK 204
E+++ +++
Sbjct: 203 AEELNQKAKEE 213
>gi|333029787|ref|ZP_08457848.1| Thymidine kinase [Bacteroides coprosuis DSM 18011]
gi|332740384|gb|EGJ70866.1| Thymidine kinase [Bacteroides coprosuis DSM 18011]
Length = 209
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGKT ELIRR++R ++A + I + D RY V +HD+ + +
Sbjct: 27 EIICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPTVDSRYSQCDVVSHDKNYINSTPVDS 86
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ D+DV+GIDE QF ++
Sbjct: 87 SSSILLLASDVDVVGIDEAQFFDL------------------------------------ 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +AN G V+VA LD F+ T F I L +A+ V K+ A+C+
Sbjct: 111 ---------GIVDVCNELANMGIRVIVAGLDMDFKGTPFGPIPHLCAIADEVSKVHAICV 161
Query: 333 SCFRDAAFTKR 343
C + A ++ R
Sbjct: 162 KCGQLALYSHR 172
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + D RY V +HD+ + + + ++ D+DV+GI
Sbjct: 43 RRLKRAKFAKQKVEIFKPTVDSRYSQCDVVSHDKNYINSTPVDSSSSILLLASDVDVVGI 102
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V +AN G V+VA LD F+ T F I L +A+ V K+ A+C+
Sbjct: 103 DEAQFFDLGIVDVCNELANMGIRVIVAGLDMDFKGTPFGPIPHLCAIADEVSKVHAICVK 162
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C + A ++ R + K+V+LG
Sbjct: 163 CGQLALYSHRTVNCNKQVLLG 183
>gi|256420562|ref|YP_003121215.1| thymidine kinase [Chitinophaga pinensis DSM 2588]
gi|256035470|gb|ACU59014.1| Thymidine kinase [Chitinophaga pinensis DSM 2588]
Length = 190
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R + AN + I + D RYD + + +HD+ ++ +
Sbjct: 16 EVICGSMFSGKTEELIRRLKRARIANLKVEIFKPMIDTRYDVQHIVSHDESRIISTPLEN 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ +++DV+GIDE QF +
Sbjct: 76 SQQILLLAQEVDVVGIDEAQFFD------------------------------------- 98
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
E P+V + +A G V+VA LD F F + L+ A+ + KL A+C+
Sbjct: 99 -----GELPEV---CDQLALRGIRVIVAGLDMDFLGKPFGQMPFLLAKADYITKLHAICV 150
Query: 333 SCFRDAAFTKR 343
C A ++ R
Sbjct: 151 KCGNIANYSYR 161
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R + AN + I + D RYD + + +HD+ ++ + +++ +++DV+GI
Sbjct: 32 RRLKRARIANLKVEIFKPMIDTRYDVQHIVSHDESRIISTPLENSQQILLLAQEVDVVGI 91
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++ + +A G V+VA LD F F + L+ A+ + KL A+C+
Sbjct: 92 DEAQFFDGELPEVCDQLALRGIRVIVAGLDMDFLGKPFGQMPFLLAKADYITKLHAICVK 151
Query: 138 CFRDAAFTKRIGQEKEVIL 156
C A ++ R ++ +L
Sbjct: 152 CGNIANYSYRKSKDSHTVL 170
>gi|340617517|ref|YP_004735970.1| thymidine kinase [Zobellia galactanivorans]
gi|339732314|emb|CAZ95582.1| Thymidine kinase [Zobellia galactanivorans]
Length = 217
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 14/190 (7%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDID 74
RR++R Q+A + I + D+RYD V +HD ++ T V A +++ T D
Sbjct: 31 LIRRLKRAQFAKQKVEIFKPTVDNRYDESMVVSHDANEIRSTPVPAAANIRILGDT--CD 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D +V+ +AN G VVVA LD F+ F + +L+ AE V K+ A
Sbjct: 89 VIGIDEAQFFDDEIVTVCNDLANKGVRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFT-KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY 192
+C A ++ ++ + V+LG TE + R Y Y+ + K
Sbjct: 149 ICTRTGNLANYSYRKSSNDNLVLLGE------TEEYEPLSRAAY--YKARLKEKVKHLNV 200
Query: 193 DTEKVSTHDQ 202
D+E+VS+ ++
Sbjct: 201 DSEEVSSSNK 210
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 87/193 (45%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + D+RYD V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPTVDNRYDESMVVSHDANEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+++ T DVIGIDE QF + D+ + VC +
Sbjct: 77 AANIRILGDT--CDVIGIDEAQFFD-----DEIVTVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G VVVA LD F+ F + +L+ AE V K+ A+
Sbjct: 109 -------------------LANKGVRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVHAI 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLANYSYR 162
>gi|433460001|ref|ZP_20417637.1| thymidine kinase [Halobacillus sp. BAB-2008]
gi|432192117|gb|ELK49030.1| thymidine kinase [Halobacillus sp. BAB-2008]
Length = 208
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR+RR + + + + A D+RY + V +H+ + A
Sbjct: 11 ELICGSMFSGKSEELIRRVRRATFGHLTVRVYKPAIDNRYKEDAVVSHNGTSIMARPIES 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H T D+DV+GIDE QF +
Sbjct: 71 SLAILKHVTDDVDVVGIDEIQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V E +A+ G V+VA LD F+ F + L+ L+E V KL A+C
Sbjct: 95 ---------EHIVEVVECLADRGIRVIVAGLDTDFRGEPFGKMPELMALSESVTKLNAIC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 PVCGSPASRTQRL 158
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR+RR + + + + A D+RY + V +H+ + A ++ H T D+DV
Sbjct: 25 LIRRVRRATFGHLTVRVYKPAIDNRYKEDAVVSHNGTSIMARPIESSLAILKHVTDDVDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF + +V E +A+ G V+VA LD F+ F + L+ L+E V KL A+
Sbjct: 85 VGIDEIQFFDEHIVEVVECLADRGIRVIVAGLDTDFRGEPFGKMPELMALSESVTKLNAI 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CPVCGSPASRTQRL 158
>gi|256384020|gb|ACU78590.1| thymidine kinase [Mycoplasma mycoides subsp. capri str. GM12]
gi|256384852|gb|ACU79421.1| thymidine kinase [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455314|gb|ADH21549.1| thymidine kinase [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 209
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIP---H 69
F RR+R YA R + + + D+RY E + +H KL + S+ E+ ++I
Sbjct: 34 EFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVHSSDEIKQIIEKENQ 93
Query: 70 TKDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ +DVIGIDE QFF + VV E +AN G IV+V LD F+ F ++ L+ AE V
Sbjct: 94 IQQVDVIGIDEVQFFDEQVVELIEQLANQGIIVIVNGLDKDFRCLPFKNVDKLLVTAEFV 153
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
KL A C C A ++RI
Sbjct: 154 TKLRARCHLCGNFANRSQRI 173
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 85/198 (42%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E+I G MF+GKT E IRR+R YA R + + + D+RY E + +H KL + S
Sbjct: 21 ELITGCMFAGKTEEFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVHS 80
Query: 210 AVELNKLIP---HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ E+ ++I + +DVIGIDE QF +
Sbjct: 81 SDEIKQIIEKENQIQQVDVIGIDEVQFFD------------------------------- 109
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
VV E +AN G IV+V LD F+ F ++ L+ AE V K
Sbjct: 110 --------------EQVVELIEQLANQGIIVIVNGLDKDFRCLPFKNVDKLLVTAEFVTK 155
Query: 327 LTAVCMSCFRDAAFTKRI 344
L A C C A ++RI
Sbjct: 156 LRARCHLCGNFANRSQRI 173
>gi|301321054|gb|ADK69697.1| thymidine kinase [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 209
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIP---H 69
F RR+R YA R + + + D+RY E + +H KL + S+ E+ ++I
Sbjct: 34 EFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVHSSDEIKQIIEKENQ 93
Query: 70 TKDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ +DVIGIDE QFF + VV E +AN G IV+V LD F+ F ++ L+ AE V
Sbjct: 94 IQQVDVIGIDEVQFFDEQVVELIEQLANQGIIVIVNGLDKDFRCLPFKNVDKLLVTAEFV 153
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
KL A C C A ++RI
Sbjct: 154 TKLRARCHLCGNFANRSQRI 173
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 85/198 (42%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E+I G MF+GKT E IRR+R YA R + + + D+RY E + +H KL + S
Sbjct: 21 ELITGCMFAGKTEEFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVHS 80
Query: 210 AVELNKLIP---HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ E+ ++I + +DVIGIDE QF +
Sbjct: 81 SDEIKQIIEKENQIQQVDVIGIDEVQFFD------------------------------- 109
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
VV E +AN G IV+V LD F+ F ++ L+ AE V K
Sbjct: 110 --------------EQVVELIEQLANQGIIVIVNGLDKDFRCLPFKNVDKLLVTAEFVTK 155
Query: 327 LTAVCMSCFRDAAFTKRI 344
L A C C A ++RI
Sbjct: 156 LRARCHLCGNFANRSQRI 173
>gi|145591635|ref|YP_001153637.1| thymidine kinase [Pyrobaculum arsenaticum DSM 13514]
gi|145283403|gb|ABP50985.1| Thymidine kinase [Pyrobaculum arsenaticum DSM 13514]
Length = 185
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 56/198 (28%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV----- 208
VI+GPMF+GKTTELIRR+ RY A R ++ + + D RYD+ KV+ H+ K A
Sbjct: 4 VIVGPMFAGKTTELIRRVERYVIAGKRAIVFKPSIDARYDSSKVAAHNGLKFGAYVVPPD 63
Query: 209 -SAVE-LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ VE + KL D DV+ +DE QF
Sbjct: 64 EAGVEAIGKL---GLDYDVVAVDEIQFF-------------------------------- 88
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
PP DV++ +A+ G++V+ A L+ F+ F + + A+ V
Sbjct: 89 ----------PPSLADVLN---GLAD-GRVVIAAGLNLDFRGEPFETTMRTMAFADRVIS 134
Query: 327 LTAVCMSCFRDAAFTKRI 344
LTAVC C R A T+R+
Sbjct: 135 LTAVCKVCGRPATRTQRL 152
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 10/140 (7%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV------SAVE-LNKLIP 68
RR+ RY A R ++ + + D RYD+ KVA H+ K A + VE + KL
Sbjct: 16 ELIRRVERYVIAGKRAIVFKPSIDARYDSSKVAAHNGLKFGAYVVPPDEAGVEAIGKL-- 73
Query: 69 HTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
D DV+ +DE QFFP ++ + G++V+ A L+ F+ F + + A+ V
Sbjct: 74 -GLDYDVVAVDEIQFFPPSLADVLNGLADGRVVIAAGLNLDFRGEPFETTMRTMAFADRV 132
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
LTAVC C R A T+R+
Sbjct: 133 ISLTAVCKVCGRPATRTQRL 152
>gi|302380618|ref|ZP_07269083.1| thymidine kinase [Finegoldia magna ACS-171-V-Col3]
gi|303233803|ref|ZP_07320457.1| thymidine kinase [Finegoldia magna BVS033A4]
gi|302311561|gb|EFK93577.1| thymidine kinase [Finegoldia magna ACS-171-V-Col3]
gi|302495237|gb|EFL54989.1| thymidine kinase [Finegoldia magna BVS033A4]
Length = 210
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 44/194 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R++ A Y ++ + D RY EKV THD+ ++ A++ ++ +
Sbjct: 13 GSMFSGKTSSLWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAINVDNIDDI 72
Query: 217 IPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ +TK D++VI IDE QF+
Sbjct: 73 VEYTKTHDVNVIAIDEIQFIN--------------------------------------- 93
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
F +++ + G ++ A LD ++ F + L+P+ + VEK AVC C
Sbjct: 94 SKADHFVKQINY---LLEKGFTIIAAGLDMDYKAKPFQLVKELLPICDYVEKHHAVCAVC 150
Query: 335 FRDAAFTKRIGQEK 348
DA + RI +K
Sbjct: 151 GNDAWVSYRISDDK 164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DID 74
+ + R++ A Y ++ + D RY EKV THD+ ++ A++ ++ ++ +TK D++
Sbjct: 23 LWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAINVDNIDDIVEYTKTHDVN 82
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
VI IDE QF V + G ++ A LD ++ F + L+P+ + VEK
Sbjct: 83 VIAIDEIQFINSKADHFVKQINYLLEKGFTIIAAGLDMDYKAKPFQLVKELLPICDYVEK 142
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVI 155
AVC C DA + RI +K I
Sbjct: 143 HHAVCAVCGNDAWVSYRISDDKNRI 167
>gi|323344767|ref|ZP_08084991.1| thymidine kinase [Prevotella oralis ATCC 33269]
gi|323094037|gb|EFZ36614.1| thymidine kinase [Prevotella oralis ATCC 33269]
Length = 197
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R ++A + I + A D RY + V +HD + +
Sbjct: 16 EVVCGSMFSGKTEELIRRMKRAKFAKQKAEIFKPAIDTRYSEQDVVSHDLNVINSTPVES 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + D+DV+GIDE QF++ D + VC E
Sbjct: 76 SASILLLSSDMDVVGIDEAQFLD-----DGLVDVCNE----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 108 -----------------LANRGVRVIIAGLDMDFKGIPFGPIPALCAIADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 KCGALAYVSHRL 162
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY + V +HD + + ++ + D+DV+GI
Sbjct: 32 RRMKRAKFAKQKAEIFKPAIDTRYSEQDVVSHDLNVINSTPVESSASILLLSSDMDVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF D +V +AN G V++A LD F+ F I +L +A+ V K+ A+C+
Sbjct: 92 DEAQFLDDGLVDVCNELANRGVRVIIAGLDMDFKGIPFGPIPALCAIADEVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + +K+V+LG
Sbjct: 152 CGALAYVSHRLVPNDKQVLLG 172
>gi|386715909|ref|YP_006182233.1| thymidine kinase [Halobacillus halophilus DSM 2266]
gi|384075466|emb|CCG46961.1| thymidine kinase [Halobacillus halophilus DSM 2266]
Length = 208
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR + N + + A DDRY + V +H+ + A E
Sbjct: 13 EVICGSMFSGKSEELIRRVRRATFGNLTVRVYKPAVDDRYKEDAVVSHNGTSVLARPMKE 72
Query: 213 -LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
L+ L +++D++GIDE QF +
Sbjct: 73 SLDILNDVGEEVDIVGIDEVQFFD------------------------------------ 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V AE +A+ G V+ A LD F+ F + ++ L+E + KL A+C
Sbjct: 97 ---------EHIVEVAECLADRGIRVITAGLDTDFRGEPFGKMPEMMALSESITKLNAIC 147
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 148 PICGSPASRTQRL 160
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-LNKLIPHTKDIDV 75
RR+RR + N + + A DDRY + V +H+ + A E L+ L +++D+
Sbjct: 27 LIRRVRRATFGNLTVRVYKPAVDDRYKEDAVVSHNGTSVLARPMKESLDILNDVGEEVDI 86
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF + +V AE +A+ G V+ A LD F+ F + ++ L+E + KL A+
Sbjct: 87 VGIDEVQFFDEHIVEVAECLADRGIRVITAGLDTDFRGEPFGKMPEMMALSESITKLNAI 146
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 147 CPICGSPASRTQRL 160
>gi|417925911|ref|ZP_12569324.1| putative thymidine kinase [Finegoldia magna SY403409CC001050417]
gi|341590513|gb|EGS33751.1| putative thymidine kinase [Finegoldia magna SY403409CC001050417]
Length = 210
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 44/194 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R++ A Y ++ + D RY EKV THD+ ++ A++ ++ +
Sbjct: 13 GSMFSGKTSSLWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAINVDNIDDI 72
Query: 217 IPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ +TK D++VI IDE QF+
Sbjct: 73 VEYTKTHDVNVIAIDEIQFIN--------------------------------------- 93
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
F +++ + G ++ A LD ++ F + L+P+ + VEK AVC C
Sbjct: 94 SKADHFVKQINY---LLEKGFTIIAAGLDMDYKAKPFQLVKELLPICDYVEKHHAVCAVC 150
Query: 335 FRDAAFTKRIGQEK 348
DA + RI +K
Sbjct: 151 GNDAWVSYRISDDK 164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DID 74
+ + R++ A Y ++ + D RY EKV THD+ ++ A++ ++ ++ +TK D++
Sbjct: 23 LWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAINVDNIDDIVEYTKTHDVN 82
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
VI IDE QF V + G ++ A LD ++ F + L+P+ + VEK
Sbjct: 83 VIAIDEIQFINSKADHFVKQINYLLEKGFTIIAAGLDMDYKAKPFQLVKELLPICDYVEK 142
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVI 155
AVC C DA + RI +K I
Sbjct: 143 HHAVCAVCGNDAWVSYRISDDKNRI 167
>gi|225010283|ref|ZP_03700755.1| Thymidine kinase [Flavobacteria bacterium MS024-3C]
gi|225005762|gb|EEG43712.1| Thymidine kinase [Flavobacteria bacterium MS024-3C]
Length = 228
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR++R Q+A R I + D RY E V +HD+ ++ + + DV+
Sbjct: 31 LIRRLKRAQFAKQRIEIFKPQIDTRYHDEMVVSHDENQIRSTPVPAAANIRILADQCDVV 90
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF +++ +AN GK V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 91 GIDEAQFFDAEIIHVCNDLANKGKRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVC 150
Query: 136 MSCFRDAAFT-KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKD 189
A ++ ++ EK V+L G+TTE + R Y ++ M+ KD
Sbjct: 151 TRTGNLANYSFRKSANEKLVLL-----GETTEY-EPLSRSAY--FKAMLKERVKD 197
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 80/191 (41%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A R I + D RY E V +HD+ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQRIEIFKPQIDTRYHDEMVVSHDENQIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ DV+GIDE QF +
Sbjct: 77 AANIRILADQCDVVGIDEAQFFDA------------------------------------ 100
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+++ +AN GK V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 101 ---------EIIHVCNDLANKGKRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
>gi|169824412|ref|YP_001692023.1| thymidine kinase [Finegoldia magna ATCC 29328]
gi|167831217|dbj|BAG08133.1| thymidine kinase [Finegoldia magna ATCC 29328]
Length = 210
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 44/194 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R++ A Y ++ + D RY EKV THD+ ++ A++ ++ +
Sbjct: 13 GSMFSGKTSSLWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAINVDNIDDI 72
Query: 217 IPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ +TK D++VI IDE QF+
Sbjct: 73 VEYTKTHDVNVIAIDEIQFIN--------------------------------------- 93
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
F +++ + G ++ A LD ++ F + L+P+ + VEK AVC C
Sbjct: 94 SKADHFVKQINY---LLEKGFTIIAAGLDMDYKAKPFQLVKELLPICDYVEKHHAVCAVC 150
Query: 335 FRDAAFTKRIGQEK 348
DA + RI +K
Sbjct: 151 GNDAWVSYRISDDK 164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DID 74
+ + R++ A Y ++ + D RY EKV THD+ ++ A++ ++ ++ +TK D++
Sbjct: 23 LWKEVNRFKIAKYNVVVFKPRMDSRYSKEKVVTHDKNEIEAINVDNIDDIVEYTKTHDVN 82
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
VI IDE QF V + G ++ A LD ++ F + L+P+ + VEK
Sbjct: 83 VIAIDEIQFINSKADHFVKQINYLLEKGFTIIAAGLDMDYKAKPFQLVKELLPICDYVEK 142
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVI 155
AVC C DA + RI +K I
Sbjct: 143 HHAVCAVCGNDAWVSYRISDDKNRI 167
>gi|442771628|gb|AGC72309.1| thymidine kinase [uncultured bacterium A1Q1_fos_1093]
Length = 195
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR+ R + A + I + A D RY E + +H++ + +
Sbjct: 20 EVVCGSMFSGKTEELIRRLNRAKIARQKVEIFKPAIDKRYHDEDIVSHNENSIRSTPVNA 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ D DV+GIDE QF+++
Sbjct: 80 AEEILLFAGDCDVVGIDEAQFLDI------------------------------------ 103
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +A GK V+VA LD F F + L+ +AE V K+ A+C+
Sbjct: 104 ---------SLVEVCNRLATNGKRVIVAGLDMDFSGKPFGPMPQLMSIAEYVTKVHAICI 154
Query: 333 SCFRDAAFTKR 343
C A ++ R
Sbjct: 155 VCGEVAQYSYR 165
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R + A + I + A D RY E + +H++ + + +++ D DV+GI
Sbjct: 36 RRLNRAKIARQKVEIFKPAIDKRYHDEDIVSHNENSIRSTPVNAAEEILLFAGDCDVVGI 95
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF +V +A GK V+VA LD F F + L+ +AE V K+ A+C+
Sbjct: 96 DEAQFLDISLVEVCNRLATNGKRVIVAGLDMDFSGKPFGPMPQLMSIAEYVTKVHAICIV 155
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
C A ++ +++ + +++LG
Sbjct: 156 CGEVAQYSYRKVTSQDKILLG 176
>gi|149369297|ref|ZP_01889149.1| thymidine kinase [unidentified eubacterium SCB49]
gi|149356724|gb|EDM45279.1| thymidine kinase [unidentified eubacterium SCB49]
Length = 212
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 83/180 (46%), Gaps = 47/180 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RYD E+V +HD+ ++ + + V
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFARQKVEIFKPAVDTRYDDEEVVSHDKNQIRS-TPVP 75
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
IP D DV+GIDE QF + NE
Sbjct: 76 AAANIPILADGCDVVGIDEAQFFD-------------------------------NE--- 101
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 102 -----------IVKVCNDLANRGIRVIVAGLDMDFKGKPFGPMPALMATAEYVTKVHAVC 150
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 10/177 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-ID 74
RR++R Q+A + I + A D RYD E+V +HD+ ++ + + V IP D D
Sbjct: 30 ELIRRLKRAQFARQKVEIFKPAVDTRYDDEEVVSHDKNQIRS-TPVPAAANIPILADGCD 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF + +V +AN G V+VA LD F+ F + +L+ AE V K+ A
Sbjct: 89 VVGIDEAQFFDNEIVKVCNDLANRGIRVIVAGLDMDFKGKPFGPMPALMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDD 190
VC A ++ R +++L G+T E + R Y Y+ M+ K++
Sbjct: 149 VCPRTGNLANYSFRKSTSDDLVL----LGETEEY-EPLSRAAY--YKAMLREKGKEN 198
>gi|229917065|ref|YP_002885711.1| thymidine kinase [Exiguobacterium sp. AT1b]
gi|229468494|gb|ACQ70266.1| Thymidine kinase [Exiguobacterium sp. AT1b]
Length = 203
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 86/210 (40%), Gaps = 47/210 (22%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
T R G EVI G MFSGK+ ELIRR+RR Y + + A DDRY E V +H
Sbjct: 5 TNRYGW-IEVICGSMFSGKSEELIRRVRRAHYGKIPVQVFKPAIDDRYHEENVVSHTGNS 63
Query: 205 LTAVSAVELNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
+ AV +L + + VI IDE QF +
Sbjct: 64 VVAVPIASSQELYDAVREETQVIAIDEVQFFD---------------------------- 95
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
+V E +AN K V+ A LD F+ F + L+ AE
Sbjct: 96 -----------------EGIVDVIEQLANEDKRVICAGLDMDFRGEPFTMMPELLSRAEF 138
Query: 324 VEKLTAVCMSCFRDAAFTKRIGQEKEVRIE 353
V KL A+C+SC A+ T+R+ + R E
Sbjct: 139 VTKLQAICLSCGAPASRTQRLIDGQPARYE 168
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR+RR Y + + A DDRY E V +H + AV +L ++ VI
Sbjct: 28 RRVRRAHYGKIPVQVFKPAIDDRYHEENVVSHTGNSVVAVPIASSQELYDAVREETQVIA 87
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + +V E +AN K V+ A LD F+ F + L+ AE V KL A+C+
Sbjct: 88 IDEVQFFDEGIVDVIEQLANEDKRVICAGLDMDFRGEPFTMMPELLSRAEFVTKLQAICL 147
Query: 137 SCFRDAAFTKRI 148
SC A+ T+R+
Sbjct: 148 SCGAPASRTQRL 159
>gi|365877405|ref|ZP_09416909.1| thymidine kinase [Elizabethkingia anophelis Ag1]
gi|442587679|ref|ZP_21006494.1| thymidine kinase [Elizabethkingia anophelis R26]
gi|365754838|gb|EHM96773.1| thymidine kinase [Elizabethkingia anophelis Ag1]
gi|442562533|gb|ELR79753.1| thymidine kinase [Elizabethkingia anophelis R26]
Length = 197
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A + I + D RY E + +H+ K+ + +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAEMAGQQVEIFKPKIDVRYSDEDIVSHNDNKIRSTAVDT 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
N+++ + DV+GIDE QF +
Sbjct: 77 PNEILLLGSNCDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
VV A +AN+G VV+A LD F F + +L+ AE V K+ A+C
Sbjct: 100 --------ESVVEVANQLANSGTRVVIAGLDMDFMGRPFGPMPNLMATAEYVTKVHAICK 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
A ++ R K++
Sbjct: 152 RTGNLANYSLRTSASKDL 169
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR+RR + A + I + D RY E + +H+ K+ + + N+++ + DV
Sbjct: 30 ELIRRLRRAEMAGQQVEIFKPKIDVRYSDEDIVSHNDNKIRSTAVDTPNEILLLGSNCDV 89
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF + VV A +AN+G VV+A LD F F + +L+ AE V K+ A+
Sbjct: 90 VGIDEAQFFDESVVEVANQLANSGTRVVIAGLDMDFMGRPFGPMPNLMATAEYVTKVHAI 149
Query: 135 CMSCFRDAAFTKRIGQEKEVI 155
C A ++ R K+++
Sbjct: 150 CKRTGNLANYSLRTSASKDLV 170
>gi|312131923|ref|YP_003999263.1| thymidine kinase [Leadbetterella byssophila DSM 17132]
gi|311908469|gb|ADQ18910.1| Thymidine kinase [Leadbetterella byssophila DSM 17132]
Length = 198
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R + AN I + D RYD E + +H++ + + +++ ++ DV+GI
Sbjct: 35 RRLNRARIANLNVEIFKPGIDVRYDEEDIVSHNKNSIRSTPVNMAEEILLYSGSCDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +A+AGK V++A LD F + L+ +AE V K+ A+C++
Sbjct: 95 DEAQFFDDALVDVVNKLADAGKRVILAGLDMDSNGVPFGPMPHLMAVAEYVTKVHAICVN 154
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
C A ++ ++ E +++LG
Sbjct: 155 CGEIAHYSFRKSASESQILLG 175
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 47/192 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R + AN I + D RYD E + +H++ + +
Sbjct: 19 EVISGSMFSGKTEELIRRLNRARIANLNVEIFKPGIDVRYDEEDIVSHNKNSIRSTPVNM 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ ++ DV+GIDE QF
Sbjct: 79 AEEILLYSGSCDVVGIDEAQF--------------------------------------- 99
Query: 273 NVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
F D +V +A+AGK V++A LD F + L+ +AE V K+ A+C
Sbjct: 100 -------FDDALVDVVNKLADAGKRVILAGLDMDSNGVPFGPMPHLMAVAEYVTKVHAIC 152
Query: 332 MSCFRDAAFTKR 343
++C A ++ R
Sbjct: 153 VNCGEIAHYSFR 164
>gi|410029462|ref|ZP_11279298.1| thymidine kinase [Marinilabilia sp. AK2]
Length = 169
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + D RY V +H++ + + +I D DV+GI
Sbjct: 11 RRLNRALIAKQKVEIFKPTVDKRYHEFDVVSHNENAIRSTPVNFAEDIILLAGDCDVVGI 70
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +V A+ +AN+GK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 71 DEVQFFDNRIVHVAKVLANSGKRVILAGLDMDFEGNPFEPMPQLLAVAEYVTKVHAICMK 130
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C AA++ R+ KE V+LG
Sbjct: 131 CGDLAAYSFRLTATKEKVLLG 151
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 45/191 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR+ R A + I + D RY V +H++ + + +I
Sbjct: 1 MFSGKTEELIRRLNRALIAKQKVEIFKPTVDKRYHEFDVVSHNENAIRSTPVNFAEDIIL 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
D DV+GIDE QF +
Sbjct: 61 LAGDCDVVGIDEVQFFD------------------------------------------- 77
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
+V A+ +AN+GK V++A LD F+ F + L+ +AE V K+ A+CM C A
Sbjct: 78 --NRIVHVAKVLANSGKRVILAGLDMDFEGNPFEPMPQLLAVAEYVTKVHAICMKCGDLA 135
Query: 339 AFTKRIGQEKE 349
A++ R+ KE
Sbjct: 136 AYSFRLTATKE 146
>gi|410584322|ref|ZP_11321425.1| thymidine kinase [Thermaerobacter subterraneus DSM 13965]
gi|410504257|gb|EKP93768.1| thymidine kinase [Thermaerobacter subterraneus DSM 13965]
Length = 216
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 84/196 (42%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---- 208
EVI G MFSGKT EL+RR++R + A R ++ + D RY + V++HD + L AV
Sbjct: 6 EVITGGMFSGKTEELLRRVQRARIARRRVLLCKPDLDHRYRRDAVASHDGRDLEAVVVPA 65
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E ++ +V+GIDE QF
Sbjct: 66 GRPEEIPVLAARSAAEVVGIDEAQFFA--------------------------------- 92
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
P +V M AG V+V+ LD F R F + L+ LA+ V KL
Sbjct: 93 ------------PPIVQAVLDMVAAGLRVIVSGLDMDFARRPFGPMPELMALADEVLKLK 140
Query: 329 AVCMSCFRDAAFTKRI 344
A+C+ C A FT+R+
Sbjct: 141 AICVVCGEPATFTQRL 156
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR++R + A R ++ + D RY + VA+HD + L AV E ++
Sbjct: 20 LLRRVQRARIARRRVLLCKPDLDHRYRRDAVASHDGRDLEAVVVPAGRPEEIPVLAARSA 79
Query: 73 IDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+GIDE QFF P +V M AG V+V+ LD F R F + L+ LA+ V KL
Sbjct: 80 AEVVGIDEAQFFAPPIVQAVLDMVAAGLRVIVSGLDMDFARRPFGPMPELMALADEVLKL 139
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C+ C A FT+R+
Sbjct: 140 KAICVVCGEPATFTQRL 156
>gi|404448487|ref|ZP_11013480.1| thymidine kinase [Indibacter alkaliphilus LW1]
gi|403766108|gb|EJZ26983.1| thymidine kinase [Indibacter alkaliphilus LW1]
Length = 196
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R A + I + + D RY V +H++ + +
Sbjct: 20 EVICGSMFSGKTEELIRRLNRALIARQKVEIFKPSIDKRYHEFDVVSHNETAIRSTPVQF 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+I + DV+GIDE QF +
Sbjct: 80 AEDIILLAGNCDVVGIDEVQFFD------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
VV A +ANAGK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 103 --------NRVVHVATVLANAGKRVILAGLDMDFEGNPFEPMPQLLAVAEYVTKVHAICM 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A+++ R+ + +E
Sbjct: 155 KCGDLASYSFRLSETRE 171
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + + D RY V +H++ + + +I + DV+GI
Sbjct: 36 RRLNRALIARQKVEIFKPSIDKRYHEFDVVSHNETAIRSTPVQFAEDIILLAGNCDVVGI 95
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + VV A +ANAGK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 96 DEVQFFDNRVVHVATVLANAGKRVILAGLDMDFEGNPFEPMPQLLAVAEYVTKVHAICMK 155
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C A+++ R+ + +E V+LG
Sbjct: 156 CGDLASYSFRLSETREKVVLG 176
>gi|403667965|ref|ZP_10933262.1| thymidine kinase [Kurthia sp. JC8E]
Length = 200
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + + + D+RY E V +H+ + A +
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAQFAKQKIAVFKPKIDNRYSEEAVVSHNGTTVIAHPIEK 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + D DVI IDE QF + Q
Sbjct: 71 AEEMWSYIDDEYDVIAIDEAQF-----------------FGQ------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ + +A+ G V++A LD F+ F + L+ +AE V KL AVC
Sbjct: 96 ----------DIIEAVQKLADHGYRVILAGLDQDFKGVPFGPMPYLMAIAEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SECGSPASRTQRL 158
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDV 75
RR+RR Q+A + + + D+RY E V +H+ + A + ++ + D DV
Sbjct: 25 LIRRVRRAQFAKQKIAVFKPKIDNRYSEEAVVSHNGTTVIAHPIEKAEEMWSYIDDEYDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF D++ + +A+ G V++A LD F+ F + L+ +AE V KL AV
Sbjct: 85 IAIDEAQFFGQDIIEAVQKLADHGYRVILAGLDQDFKGVPFGPMPYLMAIAEQVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSECGSPASRTQRL 158
>gi|390443545|ref|ZP_10231335.1| thymidine kinase [Nitritalea halalkaliphila LW7]
gi|389666426|gb|EIM77875.1| thymidine kinase [Nitritalea halalkaliphila LW7]
Length = 195
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R A + I + A D RY V +H++ + +
Sbjct: 20 EVICGSMFSGKTEELIRRLNRALIARQQVEIFKPALDTRYHAYDVVSHNETAIRSTPIQF 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + DV+GIDE QF++
Sbjct: 80 AQDILLLAGNCDVVGIDEVQFLDA------------------------------------ 103
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN GK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 104 ---------GIVEVAIRLANQGKRVILAGLDMDFEGRPFEPMPQLLAVAEYVTKVHAICM 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A+++ R+ + KE
Sbjct: 155 KCGDLASYSYRLNEAKE 171
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + A D RY V +H++ + + ++ + DV+GI
Sbjct: 36 RRLNRALIARQQVEIFKPALDTRYHAYDVVSHNETAIRSTPIQFAQDILLLAGNCDVVGI 95
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF +V A +AN GK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 96 DEVQFLDAGIVEVAIRLANQGKRVILAGLDMDFEGRPFEPMPQLLAVAEYVTKVHAICMK 155
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C A+++ R+ + KE V+LG
Sbjct: 156 CGDLASYSYRLNEAKEKVVLG 176
>gi|189462775|ref|ZP_03011560.1| hypothetical protein BACCOP_03472 [Bacteroides coprocola DSM 17136]
gi|189430391|gb|EDU99375.1| thymidine kinase [Bacteroides coprocola DSM 17136]
Length = 179
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R +A R I + A D RY +V +HD + + ++ + +IDV+GI
Sbjct: 11 RRLKRATFARQRVEIFKPAIDTRYSEAEVVSHDNNSIPSTPVDSSASILLFSSEIDVVGI 70
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +A+ G V++A LD F+ F + +L +A+ V K+ A+C+
Sbjct: 71 DEAQFFDDGLVNVCNELADRGVRVIIAGLDMDFKGVPFGPMPALCAIADEVTKVHAICVK 130
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + +K V+LG
Sbjct: 131 CGDLAYVSHRTVANDKRVLLG 151
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 45/176 (25%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR++R +A R I + A D RY +V +HD + + ++
Sbjct: 1 MFSGKTEELIRRLKRATFARQRVEIFKPAIDTRYSEAEVVSHDNNSIPSTPVDSSASILL 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
+ +IDV+GIDE QF + D + VC E
Sbjct: 61 FSSEIDVVGIDEAQFFD-----DGLVNVCNE----------------------------- 86
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
+A+ G V++A LD F+ F + +L +A+ V K+ A+C+ C
Sbjct: 87 -----------LADRGVRVIIAGLDMDFKGVPFGPMPALCAIADEVTKVHAICVKC 131
>gi|410456620|ref|ZP_11310479.1| thymidine kinase [Bacillus bataviensis LMG 21833]
gi|409927741|gb|EKN64868.1| thymidine kinase [Bacillus bataviensis LMG 21833]
Length = 198
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + + + D+RY + V +H+ A
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAQFAKQKIAVFKPKIDNRYHEQSVVSHNGSSFHAKPISH 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H + D+D+I IDE QF +
Sbjct: 71 SIEILHHVEADMDIIAIDEIQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V + +A++G V+ A LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------EGIVRVVQQLADSGHRVICAGLDMDFRGEPFGQMPMLMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C ++ T+R+
Sbjct: 146 TVCGSPSSRTQRL 158
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RR+RR Q+A + + + D+RY + V +H+ A +++ H + D+D+I
Sbjct: 27 RRVRRAQFAKQKIAVFKPKIDNRYHEQSVVSHNGSSFHAKPISHSIEILHHVEADMDIIA 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + +V + +A++G V+ A LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEIQFFDEGIVRVVQQLADSGHRVICAGLDMDFRGEPFGQMPMLMAIAESVTKLQAVCT 146
Query: 137 SCFRDAAFTKRI 148
C ++ T+R+
Sbjct: 147 VCGSPSSRTQRL 158
>gi|372223208|ref|ZP_09501629.1| thymidine kinase [Mesoflavibacter zeaxanthinifaciens S86]
Length = 214
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 83/181 (45%), Gaps = 49/181 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + D RYD E V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPQVDTRYDEEMVVSHDANEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ DV+GIDE QF + D+ ++VC +
Sbjct: 77 AANIRLL--ADGCDVVGIDEAQFFD-----DEIVSVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G VVVA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANKGIRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 149
Query: 331 C 331
C
Sbjct: 150 C 150
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R Q+A + I + D RYD E V +HD ++ T V A +L+
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPQVDTRYDEEMVVSHDANEIRSTPVPAAANIRLL--ADGC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFF D +VS +AN G VVVA LD F+ F + +L+ AE V K+
Sbjct: 88 DVVGIDEAQFFDDEIVSVCNDLANKGIRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFT-KRIGQEKEVILG 157
AVC A ++ ++ +K V+LG
Sbjct: 148 AVCTRTGNLANYSFRKSSDDKLVLLG 173
>gi|126662546|ref|ZP_01733545.1| putative thymidine kinase [Flavobacteria bacterium BAL38]
gi|126625925|gb|EAZ96614.1| putative thymidine kinase [Flavobacteria bacterium BAL38]
Length = 227
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 49/200 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + A D RY E V +HD ++ T V
Sbjct: 34 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAVDTRYHDEMVVSHDSNEIRSTPVPV 93
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
E +++ + DV+GIDE QF + ++ +AVC +
Sbjct: 94 AENIRIL--AQGCDVVGIDEAQFFD-----EEIVAVCND--------------------- 125
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN+G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 126 -------------------LANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 166
Query: 331 CMSCFRDAAFTKRIGQEKEV 350
C A ++ R +K +
Sbjct: 167 CTRTGNLAHYSFRKSDDKRL 186
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDIDVI 76
RR++R Q+A + I + A D RY E V +HD ++ T V E +++ + DV+
Sbjct: 50 RRLKRAQFAKQKVEIFKPAVDTRYHDEMVVSHDSNEIRSTPVPVAENIRIL--AQGCDVV 107
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF ++V+ +AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 108 GIDEAQFFDEEIVAVCNDLANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVC 167
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
A ++ R +K +++
Sbjct: 168 TRTGNLAHYSFRKSDDKRLVM 188
>gi|389572380|ref|ZP_10162465.1| thymidine kinase [Bacillus sp. M 2-6]
gi|388427961|gb|EIL85761.1| thymidine kinase [Bacillus sp. M 2-6]
Length = 200
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 81/193 (41%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR +R +A I + A D+RY T V +H+ + ++
Sbjct: 11 EVICGSMFSGKSEELIRRAKRATFAKQEVKIFKPAIDNRYSTSSVVSHNGSSVDGIAVTS 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+I H + DVIGIDE QF +
Sbjct: 71 PKDIITHISERTDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ +A+ G V+VA LD F+ F + L+ AE V KL AVC
Sbjct: 95 ---------ETIIDIVTQLADKGYRVIVAGLDQDFRGEPFGVVPHLMACAELVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR +R +A I + A D+RY T V +H+ + ++ +I H + DVIG
Sbjct: 27 RRAKRATFAKQEVKIFKPAIDNRYSTSSVVSHNGSSVDGIAVTSPKDIITHISERTDVIG 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + ++ +A+ G V+VA LD F+ F + L+ AE V KL AVC
Sbjct: 87 IDEVQFFDETIIDIVTQLADKGYRVIVAGLDQDFRGEPFGVVPHLMACAELVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|383454415|ref|YP_005368404.1| thymidine kinase [Corallococcus coralloides DSM 2259]
gi|380734463|gb|AFE10465.1| thymidine kinase [Corallococcus coralloides DSM 2259]
Length = 182
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR++R Y + + + D RYD +V +H Q KLT++ ++ H + D V+G
Sbjct: 11 RRVKRALYGRQKVRVFKPRIDTRYDDTQVVSHSQLKLTSLPIERAEEIFRHLSPDTQVVG 70
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QF +VV E++A G V+ A LD +Q F + L+ +AE V K A+C
Sbjct: 71 IDEVQFLGGEVVQVCEALAQRGMRVICAGLDQDYQGRPFEPMPQLMAVAEYVTKELAICA 130
Query: 137 SCFRDAAFTKR-IGQEKEVILG 157
C A ++R IG E+ V++G
Sbjct: 131 VCGNPANRSQRIIGSEERVVVG 152
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 85/194 (43%), Gaps = 47/194 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR++R Y + + + D RYD +V +H Q KLT++ ++
Sbjct: 1 MFSGKTEELIRRVKRALYGRQKVRVFKPRIDTRYDDTQVVSHSQLKLTSLPIERAEEIFR 60
Query: 219 H-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPP 277
H + D V+GIDE QF +GG
Sbjct: 61 HLSPDTQVVGIDEVQF---LGG-------------------------------------- 79
Query: 278 PEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRD 337
+VV E++A G V+ A LD +Q F + L+ +AE V K A+C C
Sbjct: 80 ----EVVQVCEALAQRGMRVICAGLDQDYQGRPFEPMPQLMAVAEYVTKELAICAVCGNP 135
Query: 338 AAFTKR-IGQEKEV 350
A ++R IG E+ V
Sbjct: 136 ANRSQRIIGSEERV 149
>gi|327314453|ref|YP_004329890.1| thymidine kinase [Prevotella denticola F0289]
gi|326944689|gb|AEA20574.1| thymidine kinase [Prevotella denticola F0289]
Length = 200
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + + D RY E V +HD+ + +
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAEFARQKVEIFKPSIDTRYSDEDVVSHDRNTIPSTPIDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ + VC
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD-----EGLTEVCNR----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 110 -----------------LANNGVRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGSLAYVSHRL 164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + + D RY E V +HD+ + + ++ DIDV+GI
Sbjct: 34 RRMKRAEFARQKVEIFKPSIDTRYSDEDVVSHDRNTIPSTPIDSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + + +AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLTEVCNRLANNGVRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R I E+ V+LG
Sbjct: 154 CGSLAYVSHRLIADERRVMLG 174
>gi|325859615|ref|ZP_08172748.1| thymidine kinase [Prevotella denticola CRIS 18C-A]
gi|325482895|gb|EGC85895.1| thymidine kinase [Prevotella denticola CRIS 18C-A]
Length = 200
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + + D RY E V +HD+ + +
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAEFARQKVEIFKPSIDTRYSDEDVVSHDRNTIPSTPIDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ + VC
Sbjct: 78 SGNILLLASDIDVVGIDEAQFLD-----EGLTEVCNR----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 110 -----------------LANNGVRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICV 152
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 153 KCGSLAYVSHRL 164
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + + D RY E V +HD+ + + ++ DIDV+GI
Sbjct: 34 RRMKRAEFARQKVEIFKPSIDTRYSDEDVVSHDRNTIPSTPIDSSGNILLLASDIDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + + +AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 94 DEAQFLDEGLTEVCNRLANNGVRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICVK 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R I E+ V+LG
Sbjct: 154 CGSLAYVSHRLIADERRVMLG 174
>gi|406663925|ref|ZP_11071932.1| Thymidine kinase [Cecembia lonarensis LW9]
gi|405551780|gb|EKB47434.1| Thymidine kinase [Cecembia lonarensis LW9]
Length = 194
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R A + I + D RY V +H++ + +
Sbjct: 20 EVICGSMFSGKTEELIRRLNRALIARQKVEIFKPTVDKRYHEFDVVSHNENAIRSTPVNF 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+I D DV+GIDE QF +
Sbjct: 80 AEDIILLAGDCDVVGIDEVQFFD------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++ A+ +AN+GK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 103 --------NRIIHVAKVLANSGKRVIMAGLDMDFEGNPFEPMPQLLAIAEYVTKVHAICM 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A+++ R+ KE
Sbjct: 155 KCGDLASYSFRLTATKE 171
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + D RY V +H++ + + +I D DV+GI
Sbjct: 36 RRLNRALIARQKVEIFKPTVDKRYHEFDVVSHNENAIRSTPVNFAEDIILLAGDCDVVGI 95
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ A+ +AN+GK V++A LD F+ F + L+ +AE V K+ A+CM
Sbjct: 96 DEVQFFDNRIIHVAKVLANSGKRVIMAGLDMDFEGNPFEPMPQLLAIAEYVTKVHAICMK 155
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C A+++ R+ KE V+LG
Sbjct: 156 CGDLASYSFRLTATKEKVLLG 176
>gi|399028520|ref|ZP_10729745.1| thymidine kinase [Flavobacterium sp. CF136]
gi|398073858|gb|EJL65018.1| thymidine kinase [Flavobacterium sp. CF136]
Length = 196
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 83/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RY E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYHDEMVVSHDANEIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DVIGIDE QF + D+ + VC +
Sbjct: 77 AANIAILAQGCDVIGIDEAQFFD-----DEIVTVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANQGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A + I + A D RY E V +HD ++ + + + DVIGI
Sbjct: 33 RRLKRAQFAKQKVEIFKPAIDTRYHDEMVVSHDANEIRSTPVPAAANIAILAQGCDVIGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVTVCNDLANQGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ ++ +K V+LG
Sbjct: 153 TGNLANYSFRKTDNDKLVMLG 173
>gi|345433316|dbj|BAK69315.1| thymidine kinase [Geobacillus thermocatenulatus]
Length = 207
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK+ ELIRR+RR Q+A + + D+RY ++V +H+ + A+ +
Sbjct: 11 EVICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDEVVSHNGNSVIAIPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ + I T DV+ IDE QF +N
Sbjct: 71 PAEMFRYISATT--DVVAIDEVQF-------------------------------FSN-- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL A
Sbjct: 96 ------------DIIDVVQTLADGGCRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLEA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q+A + + D+RY ++V +H+ + A+ + E+ + I T D V
Sbjct: 27 RRVRRAQFAKQEVKVFKPTIDNRYSEDEVVSHNGNSVIAIPVATPAEMFRYISATTD--V 84
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEVQFFSNDIIDVVQTLADGGCRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLEAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|157694100|ref|YP_001488562.1| thymidine kinase [Bacillus pumilus SAFR-032]
gi|194016233|ref|ZP_03054847.1| thymidine kinase [Bacillus pumilus ATCC 7061]
gi|166987680|sp|A8FID5.1|KITH_BACP2 RecName: Full=Thymidine kinase
gi|157682858|gb|ABV64002.1| thymidine kinase [Bacillus pumilus SAFR-032]
gi|194011706|gb|EDW21274.1| thymidine kinase [Bacillus pumilus ATCC 7061]
Length = 200
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 81/193 (41%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR +R +A I + A D+RY T V +H+ + ++
Sbjct: 11 EVICGSMFSGKSEELIRRAKRATFAKQEVKIFKPAIDNRYSTSSVVSHNGSSVDGIAVAS 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+I H + DVIGIDE QF +
Sbjct: 71 PKDIITHISERTDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ +A+ G V+VA LD F+ F + L+ AE V KL AVC
Sbjct: 95 ---------ETIIDIVTQLADKGYRVIVAGLDQDFRGEPFGVVPHLMACAELVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR +R +A I + A D+RY T V +H+ + ++ +I H + DVIG
Sbjct: 27 RRAKRATFAKQEVKIFKPAIDNRYSTSSVVSHNGSSVDGIAVASPKDIITHISERTDVIG 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + ++ +A+ G V+VA LD F+ F + L+ AE V KL AVC
Sbjct: 87 IDEVQFFDETIIDIVTQLADKGYRVIVAGLDQDFRGEPFGVVPHLMACAELVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|407977842|ref|ZP_11158678.1| thymidine kinase [Bacillus sp. HYC-10]
gi|407415704|gb|EKF37292.1| thymidine kinase [Bacillus sp. HYC-10]
Length = 200
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR++R +A I + A D+RY + V +H+ + ++
Sbjct: 11 EVICGSMFSGKSEELIRRVKRATFAKQEVKIFKPAIDNRYSSNSVVSHNGSSVDGIAVSS 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+I H + DVIGIDE QF +
Sbjct: 71 PKDIITHISERTDVIGIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ +A+ G V+VA LD F+ F + L+ AE V KL AVC
Sbjct: 95 ---------ETIIDIVTQLADKGYRVIVAGLDQDFRGEPFGVVPHLMACAELVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR++R +A I + A D+RY + V +H+ + ++ +I H + DVIG
Sbjct: 27 RRVKRATFAKQEVKIFKPAIDNRYSSNSVVSHNGSSVDGIAVSSPKDIITHISERTDVIG 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + ++ +A+ G V+VA LD F+ F + L+ AE V KL AVC
Sbjct: 87 IDEVQFFDETIIDIVTQLADKGYRVIVAGLDQDFRGEPFGVVPHLMACAELVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|146298349|ref|YP_001192940.1| thymidine kinase [Flavobacterium johnsoniae UW101]
gi|146152767|gb|ABQ03621.1| Thymidine kinase [Flavobacterium johnsoniae UW101]
Length = 194
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 83/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A R I + A D RY E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQRVEIFKPAIDTRYHDEMVVSHDANEIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ + VC +
Sbjct: 77 AANISILAQGCDVVGIDEAQFFD-----DEIVTVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGVRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A R I + A D RY E V +HD ++ + + + DV+GI
Sbjct: 33 RRLKRAQFAKQRVEIFKPAIDTRYHDEMVVSHDANEIRSTPVPAAANISILAQGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVTVCNDLANRGVRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ ++ +K V+LG
Sbjct: 153 TGNLANYSFRKTDNDKLVMLG 173
>gi|392958775|ref|ZP_10324282.1| thymidine kinase [Bacillus macauensis ZFHKF-1]
gi|391875245|gb|EIT83858.1| thymidine kinase [Bacillus macauensis ZFHKF-1]
Length = 206
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR +Y + + D+RY E V +H+ TAV A
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAKYGKLNVQVFKPLIDNRYSEESVVSHNG---TAVIAEP 67
Query: 213 LNKLIPHTKDI----DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ + + K++ +V+ IDE QF +
Sbjct: 68 VGRSVDILKNVSPNTEVVAIDEVQFFD--------------------------------- 94
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
DVV +++A+ G V+VA LD F+ F + L+ L+E V KL
Sbjct: 95 ------------EDVVEVVQTLADRGIRVIVAGLDQDFRGEPFGRVPELMALSEDVTKLH 142
Query: 329 AVCMSCFRDAAFTKRI 344
A+CM C A+ T+R+
Sbjct: 143 AICMVCGSPASRTQRL 158
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 8/137 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI--- 73
RR+RR +Y + + D+RY E V +H+ TAV A + + + K++
Sbjct: 25 LIRRVRRAKYGKLNVQVFKPLIDNRYSEESVVSHNG---TAVIAEPVGRSVDILKNVSPN 81
Query: 74 -DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+ IDE QFF DVV +++A+ G V+VA LD F+ F + L+ L+E V KL
Sbjct: 82 TEVVAIDEVQFFDEDVVEVVQTLADRGIRVIVAGLDQDFRGEPFGRVPELMALSEDVTKL 141
Query: 132 TAVCMSCFRDAAFTKRI 148
A+CM C A+ T+R+
Sbjct: 142 HAICMVCGSPASRTQRL 158
>gi|326799778|ref|YP_004317597.1| thymidine kinase [Sphingobacterium sp. 21]
gi|326550542|gb|ADZ78927.1| Thymidine kinase [Sphingobacterium sp. 21]
Length = 193
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 88/208 (42%), Gaps = 47/208 (22%)
Query: 139 FRDAAFTKRIGQEK--EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK 196
F + F + G + EVI G MFSGKT ELIRR+RR Q A I + D RY T +
Sbjct: 3 FSEHNFINKTGPKGSIEVICGSMFSGKTEELIRRLRRAQIAKLEVEIFKPTVDTRYATTE 62
Query: 197 VSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAP 256
+ +HD+ + + + ++ V+GIDE QF +
Sbjct: 63 IVSHDKNSIQSTVVEMSSAILLLGTQTQVVGIDEAQFFD--------------------- 101
Query: 257 IKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILS 316
P+V + +AN G V+VA LD + F I +
Sbjct: 102 ---------------------DNLPEVCNI---LANKGIRVIVAGLDMDYMGRPFGPIPN 137
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRI 344
L+ +AE V K+ AVC+ C A ++ RI
Sbjct: 138 LMAIAEHVTKVHAVCVCCGAPANYSYRI 165
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q A I + D RY T ++ +HD+ + + + ++ V+GI
Sbjct: 35 RRLRRAQIAKLEVEIFKPTVDTRYATTEIVSHDKNSIQSTVVEMSSAILLLGTQTQVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D + +AN G V+VA LD + F I +L+ +AE V K+ AVC+
Sbjct: 95 DEAQFFDDNLPEVCNILANKGIRVIVAGLDMDYMGRPFGPIPNLMAIAEHVTKVHAVCVC 154
Query: 138 CFRDAAFTKRIGQEKEVIL 156
C A ++ RI +L
Sbjct: 155 CGAPANYSYRISTGNTRVL 173
>gi|305665878|ref|YP_003862165.1| putative thymidine kinase [Maribacter sp. HTCC2170]
gi|88710653|gb|EAR02885.1| putative thymidine kinase [Maribacter sp. HTCC2170]
Length = 214
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDID 74
RR++R Q+A + I + D RY E V +HD ++ T V A +++ T D
Sbjct: 31 LIRRLKRAQFAKQKVEIFKPMVDKRYHEEMVVSHDANEIRSTPVPAAANIRILADT--CD 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ A
Sbjct: 89 VIGIDEAQFFDDEIVTVCNDLANRGVRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD 193
VC A ++ R +++L G+T E + R Y Y+ M+ K+ D
Sbjct: 149 VCTRTGNLANYSFRKAHNDDLVL----LGETGEY-EPLSRAAY--YKAMLKERVKEIDVD 201
Query: 194 TEKVS 198
E++S
Sbjct: 202 VEEIS 206
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 86/193 (44%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + D RY E V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPMVDKRYHEEMVVSHDANEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+++ T DVIGIDE QF + D+ + VC +
Sbjct: 77 AANIRILADT--CDVIGIDEAQFFD-----DEIVTVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANRGVRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLANYSFR 162
>gi|309790795|ref|ZP_07685340.1| thymidine kinase [Oscillochloris trichoides DG-6]
gi|308227166|gb|EFO80849.1| thymidine kinase [Oscillochloris trichoides DG6]
Length = 177
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 42/186 (22%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR+R+ Q A C I D RY + +V++H +L AV + ++I
Sbjct: 1 MFSGKTEELIRRMRQVQIARQHCRIFTPRLDTRYTSSQVASHSGARLEAVPVSSIKEVIA 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
+ + VI IDE F+E D+ P
Sbjct: 61 GAEGVQVIAIDELHFLE-----DR-----------------------------------P 80
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
E ++V+ + +A+ G V+VA LD ++ F + L+ LAE V+KL A+C+ C A
Sbjct: 81 E--EIVAGCQELADRGLRVLVAGLDQNYRAEPFPAMAQLMALAEQVDKLYAICVRCGAYA 138
Query: 339 AFTKRI 344
++R+
Sbjct: 139 TRSQRL 144
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+R+ Q A C I D RY + +VA+H +L AV + ++I + + VI I
Sbjct: 11 RRMRQVQIARQHCRIFTPRLDTRYTSSQVASHSGARLEAVPVSSIKEVIAGAEGVQVIAI 70
Query: 79 DEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
DE F D +V+ + +A+ G V+VA LD ++ F + L+ LAE V+KL A+
Sbjct: 71 DELHFLEDRPEEIVAGCQELADRGLRVLVAGLDQNYRAEPFPAMAQLMALAEQVDKLYAI 130
Query: 135 CMSCFRDAAFTKRI 148
C+ C A ++R+
Sbjct: 131 CVRCGAYATRSQRL 144
>gi|403236589|ref|ZP_10915175.1| thymidine kinase [Bacillus sp. 10403023]
Length = 206
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA---VS 209
EVI G MFSGK+ ELIRR+RR ++A + + D+RY + V +H+ A +
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTEFARQSVQVFKPQIDNRYSDDSVVSHNGASFVAKPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ E+ + + + D DV+ IDE QF +
Sbjct: 71 SAEILEAV--SADTDVVAIDEVQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++V + +AN G V+VA LD F+ F + L+ LAE V KL A
Sbjct: 95 -----------DEIVEVVQILANRGHRVIVAGLDQDFRGEPFGKVPELLSLAELVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C ++ T+R+
Sbjct: 144 VCSVCGSPSSRTQRL 158
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA---VSAVELNKLIPHTKDI 73
RR+RR ++A + + D+RY + V +H+ A ++ E+ + + + D
Sbjct: 25 LIRRVRRTEFARQSVQVFKPQIDNRYSDDSVVSHNGASFVAKPVATSAEILEAV--SADT 82
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ IDE QFF D +V + +AN G V+VA LD F+ F + L+ LAE V KL
Sbjct: 83 DVVAIDEVQFFDDEIVEVVQILANRGHRVIVAGLDQDFRGEPFGKVPELLSLAELVTKLQ 142
Query: 133 AVCMSCFRDAAFTKRI--GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDD 190
AVC C ++ T+R+ GQ + G + R R + + ++ AK D
Sbjct: 143 AVCSVCGSPSSRTQRLINGQPASYDDPVILVGASESYEPRCRHHHEVPGKPLLQLVAKKD 202
>gi|42560701|ref|NP_975152.1| thymidine kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|60390124|sp|Q8VVL0.1|KITH_MYCMS RecName: Full=Thymidine kinase
gi|17529627|emb|CAC85214.1| thymidine kinase [Mycoplasma mycoides subsp. mycoides SC]
gi|42492197|emb|CAE76794.1| thymidine kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
Length = 209
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIP---H 69
F RR+R YA R + + + D+RY E + +H KL + S+ E+ ++I
Sbjct: 34 EFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVHSSDEIKQIIEKENQ 93
Query: 70 TKDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ +DVIGIDE QFF + VV E +AN G IV+V LD F+ F ++ L+ AE V
Sbjct: 94 IQQVDVIGIDEVQFFDEQVVELIEQLANQGIIVIVNGLDKDFRCLPFKNVDKLLVTAEFV 153
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
KL A C C A +++I
Sbjct: 154 TKLRARCHLCGNFANRSQKI 173
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E+I G MF+GKT E IRR+R YA R + + + D+RY E + +H KL + S
Sbjct: 21 ELITGCMFAGKTEEFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVHS 80
Query: 210 AVELNKLIP---HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ E+ ++I + +DVIGIDE QF +
Sbjct: 81 SDEIKQIIEKENQIQQVDVIGIDEVQFFD------------------------------- 109
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
VV E +AN G IV+V LD F+ F ++ L+ AE V K
Sbjct: 110 --------------EQVVELIEQLANQGIIVIVNGLDKDFRCLPFKNVDKLLVTAEFVTK 155
Query: 327 LTAVCMSCFRDAAFTKRI 344
L A C C A +++I
Sbjct: 156 LRARCHLCGNFANRSQKI 173
>gi|331703152|ref|YP_004399839.1| thymidine kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328801707|emb|CBW53860.1| Thymidine kinase [Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 209
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIP---H 69
F RR+R YA R + + + D+RY E + +H KL + S+ E+ +I
Sbjct: 34 EFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVHSSDEIKLIIEKENQ 93
Query: 70 TKDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ +DVIGIDE QFF + VV E +AN G IV+V LD F+ F ++ L+ AE V
Sbjct: 94 IQQVDVIGIDEVQFFDEQVVELIEQLANQGIIVIVNGLDKDFRCLPFKNVDKLLVTAEFV 153
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
KL A C C A ++RI
Sbjct: 154 TKLRARCHLCGNFANRSQRI 173
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 84/198 (42%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA--VSA 210
E+I G MF+GKT E IRR+R YA R + + + D+RY E + +H KL + V +
Sbjct: 21 ELITGCMFAGKTEEFIRRLRVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVHS 80
Query: 211 VELNKLI----PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ KLI + +DVIGIDE QF +
Sbjct: 81 SDEIKLIIEKENQIQQVDVIGIDEVQFFD------------------------------- 109
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
VV E +AN G IV+V LD F+ F ++ L+ AE V K
Sbjct: 110 --------------EQVVELIEQLANQGIIVIVNGLDKDFRCLPFKNVDKLLVTAEFVTK 155
Query: 327 LTAVCMSCFRDAAFTKRI 344
L A C C A ++RI
Sbjct: 156 LRARCHLCGNFANRSQRI 173
>gi|384439449|ref|YP_005654173.1| thymidine kinase [Thermus sp. CCB_US3_UF1]
gi|359290582|gb|AEV16099.1| Thymidine kinase [Thermus sp. CCB_US3_UF1]
Length = 188
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+ ELIRR++R A R ++ + D+RY V +HD +++ A+
Sbjct: 8 EVIAGPMFSGKSEELIRRVKRALIARQRVLVFKPRLDNRYGEGHVVSHDGERVEAIPIAR 67
Query: 213 LNKLIPHTKDI-DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + K + V+ +DE QF+ D+ +
Sbjct: 68 AEEMEAYLKPLPQVVAVDEVQFL------DRAL--------------------------- 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+ E +A G V++A LD F+ F + L+ AE VEKLTA+C
Sbjct: 95 ------------LPLVERLAQEGVRVILAGLDLDFRGEPFGLMPELLARAEFVEKLTAIC 142
Query: 332 MSCFRDAAFTKRIGQEKEVR 351
C A T+R+ K R
Sbjct: 143 PRCGAPATRTQRLVDGKPAR 162
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-DV 75
RR++R A R ++ + D+RY V +HD +++ A+ ++ + K + V
Sbjct: 22 LIRRVKRALIARQRVLVFKPRLDNRYGEGHVVSHDGERVEAIPIARAEEMEAYLKPLPQV 81
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ +DE QF ++ E +A G V++A LD F+ F + L+ AE VEKLTA+
Sbjct: 82 VAVDEVQFLDRALLPLVERLAQEGVRVILAGLDLDFRGEPFGLMPELLARAEFVEKLTAI 141
Query: 135 CMSCFRDAAFTKRI 148
C C A T+R+
Sbjct: 142 CPRCGAPATRTQRL 155
>gi|392969021|ref|ZP_10334437.1| Thymidine kinase [Fibrisoma limi BUZ 3]
gi|387843383|emb|CCH56491.1| Thymidine kinase [Fibrisoma limi BUZ 3]
Length = 208
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGKT ELIRR+ R + A I + A D RY + +H + ++
Sbjct: 20 EAICGSMFSGKTEELIRRLNRARIAKLNVRIFKPALDTRYHEADIVSHSALSIQSIPVHT 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ D DV+GIDE QF +
Sbjct: 80 AGQILQLAGDCDVVGIDEAQFFD------------------------------------- 102
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D+V+ ++AN G+ V+VA LD F F + L+ +AE V K+ A+C+
Sbjct: 103 --------KDIVAVCNTLANQGQRVIVAGLDMDFAGQPFGCMPQLLSIAEYVTKVHAICV 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A ++ R+ +E
Sbjct: 155 VCGDIAQYSYRLVPSQE 171
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 5/156 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R + A I + A D RY + +H + ++ +++ D DV+GI
Sbjct: 36 RRLNRARIAKLNVRIFKPALDTRYHEADIVSHSALSIQSIPVHTAGQILQLAGDCDVVGI 95
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D+V+ ++AN G+ V+VA LD F F + L+ +AE V K+ A+C+
Sbjct: 96 DEAQFFDKDIVAVCNTLANQGQRVIVAGLDMDFAGQPFGCMPQLLSIAEYVTKVHAICVV 155
Query: 138 CFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRR 173
C A ++ R+ +E +L G+T R RR
Sbjct: 156 CGDIAQYSYRLVPSQERVL----LGETDSYEARCRR 187
>gi|322368918|ref|ZP_08043485.1| thymidine kinase [Haladaptatus paucihalophilus DX253]
gi|320551649|gb|EFW93296.1| thymidine kinase [Haladaptatus paucihalophilus DX253]
Length = 195
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 88/197 (44%), Gaps = 51/197 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR + A + + A DDRY + V +HD A + VE
Sbjct: 11 EVITGCMFSGKTEELLRRLRRAEIAGQEVAVFKPALDDRYGEDTVGSHDGSSWEA-TVVE 69
Query: 213 LNK----LIPHTKDID-VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+ IP + + V+ IDE F S++ ++VC
Sbjct: 70 PDDDGVWSIPDGLNGEQVVAIDEANFF-----SEELVSVC-------------------- 104
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
E +A G+ VVV+ D TF+ F+ + LI LAE VEKL
Sbjct: 105 --------------------EFLAEDGRRVVVSGTDQTFRGEPFDPVPQLIALAEYVEKL 144
Query: 328 TAVCMSCFRDAAFTKRI 344
A+C +C A +R+
Sbjct: 145 QAICATCGEPATRNQRL 161
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNK----LIPHTKDID 74
RR+RR + A + + A DDRY + V +HD A + VE + IP + +
Sbjct: 27 RRLRRAEIAGQEVAVFKPALDDRYGEDTVGSHDGSSWEA-TVVEPDDDGVWSIPDGLNGE 85
Query: 75 -VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
V+ IDE FF + +VS E +A G+ VVV+ D TF+ F+ + LI LAE VEKL
Sbjct: 86 QVVAIDEANFFSEELVSVCEFLAEDGRRVVVSGTDQTFRGEPFDPVPQLIALAEYVEKLQ 145
Query: 133 AVCMSCFRDAAFTKRI 148
A+C +C A +R+
Sbjct: 146 AICATCGEPATRNQRL 161
>gi|212696061|ref|ZP_03304189.1| hypothetical protein ANHYDRO_00597 [Anaerococcus hydrogenalis DSM
7454]
gi|212676690|gb|EEB36297.1| hypothetical protein ANHYDRO_00597 [Anaerococcus hydrogenalis DSM
7454]
Length = 215
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--ID 74
R + R + A Y+ + + + D R++ EK+ +HD +L A+ + + ++K+ ID
Sbjct: 36 LWRELYRMKIAGYKTVAFKPSVDSRHEDEKIVSHDNLELDAIKINSIKDIFEYSKNNQID 95
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
IGIDE QFFPD +V++ + N+ +VV+ LD ++ F + L+P+A+ + K
Sbjct: 96 AIGIDEVQFFPDDPSEIVNYFIKLMNSHITIVVSGLDMDYKARPFEIVKELMPIADELIK 155
Query: 131 LTAVCMSCFRDAAFTKR 147
A+C SC DA + R
Sbjct: 156 HHAICASCGEDAWVSFR 172
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 47/217 (21%)
Query: 141 DAAFTKRIGQEKEVIL--GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS 198
++ F K + + ++I+ G MFSGKTT L R + R + A Y+ + + + D R++ EK+
Sbjct: 8 NSMFRKNMKKNAKLIVHTGSMFSGKTTSLWRELYRMKIAGYKTVAFKPSVDSRHEDEKIV 67
Query: 199 THDQQKLTAVSAVELNKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAP 256
+HD +L A+ + + ++K+ ID IGIDE QF
Sbjct: 68 SHDNLELDAIKINSIKDIFEYSKNNQIDAIGIDEVQFF---------------------- 105
Query: 257 IKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILS 316
P + ++V++ + N+ +VV+ LD ++ F +
Sbjct: 106 --------------------PDDPSEIVNYFIKLMNSHITIVVSGLDMDYKARPFEIVKE 145
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRIE 353
L+P+A+ + K A+C SC DA + R E RIE
Sbjct: 146 LMPIADELIKHHAICASCGEDAWVSFR-KSYNEDRIE 181
>gi|150025142|ref|YP_001295968.1| thymidine kinase [Flavobacterium psychrophilum JIP02/86]
gi|149771683|emb|CAL43157.1| Thymidine kinase [Flavobacterium psychrophilum JIP02/86]
Length = 202
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + D RYD E V +H++ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPTIDTRYDDEMVVSHNKNEIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ + +C +
Sbjct: 77 AANIAILAQGCDVVGIDEAQFFD-----DEIVKICND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A + I + D RYD E V +H++ ++ + + + DV+GI
Sbjct: 33 RRLKRAQFAKQKVEIFKPTIDTRYDDEMVVSHNKNEIRSTPVPAAANIAILAQGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVKICNDLANSGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANY--RCMIVRYAK 188
A ++ ++ +K V+LG TE + R Y N MIV+ A+
Sbjct: 153 TGNLANYSFRKTDNDKLVMLG------ETEEYEPLSRAAYYNAMRENMIVKDAE 200
>gi|325270827|ref|ZP_08137417.1| thymidine kinase [Prevotella multiformis DSM 16608]
gi|324986838|gb|EGC18831.1| thymidine kinase [Prevotella multiformis DSM 16608]
Length = 199
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 47/193 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + + D RY E V +HDQ + + + ++
Sbjct: 18 EVICGSMFSGKTEELIRRMKRAKFARQKVEIFKPSIDTRYSDEDVVSHDQNTIHS-TPID 76
Query: 213 LNKLIP-HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ IP IDV+GIDE QF++ D + VC +
Sbjct: 77 SSGSIPLLAAGIDVVGIDEAQFLD-----DGLVDVCNQ---------------------- 109
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V++A LD ++ F I +L +A+ V K+ A+C
Sbjct: 110 ------------------LANNGVRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAIC 151
Query: 332 MSCFRDAAFTKRI 344
+ C A + R+
Sbjct: 152 VKCGALAYVSHRL 164
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR++R ++A + I + + D RY E V +HDQ + + + ++ + IP IDV+G
Sbjct: 34 RRMKRAKFARQKVEIFKPSIDTRYSDEDVVSHDQNTIHS-TPIDSSGSIPLLAAGIDVVG 92
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QF D +V +AN G V++A LD ++ F I +L +A+ V K+ A+C+
Sbjct: 93 IDEAQFLDDGLVDVCNQLANNGVRVIIAGLDMDYKGVPFGPIPALCAIADEVTKVHAICV 152
Query: 137 SCFRDAAFTKR-IGQEKEVILG 157
C A + R + ++ V+LG
Sbjct: 153 KCGALAYVSHRLVADDRRVMLG 174
>gi|86144172|ref|ZP_01062509.1| putative thymidine kinase [Leeuwenhoekiella blandensis MED217]
gi|85829434|gb|EAQ47899.1| putative thymidine kinase [Leeuwenhoekiella blandensis MED217]
Length = 213
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 84/192 (43%), Gaps = 47/192 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RYD E V +HD ++ + + V
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPAIDTRYDDELVISHDANEIRS-TPVP 75
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
IP D DVIGIDE QF +
Sbjct: 76 AAANIPILADGCDVIGIDEAQFFD------------------------------------ 99
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 100 ---------EEIVKVCNDLANRGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVC 150
Query: 332 MSCFRDAAFTKR 343
A F+ R
Sbjct: 151 TRTGNLAQFSYR 162
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-ID 74
RR++R ++A + I + A D RYD E V +HD ++ + + V IP D D
Sbjct: 30 ELIRRLKRAKFAKQKVEIFKPAIDTRYDDELVISHDANEIRS-TPVPAAANIPILADGCD 88
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
VIGIDE QFF ++V +AN G V+VA LD F+ F + +L+ AE V K+ A
Sbjct: 89 VIGIDEAQFFDEEIVKVCNDLANRGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
VC A F+ R +++L
Sbjct: 149 VCTRTGNLAQFSYRKATSDDLVL 171
>gi|227540631|ref|ZP_03970680.1| thymidine kinase [Sphingobacterium spiritivorum ATCC 33300]
gi|227239517|gb|EEI89532.1| thymidine kinase [Sphingobacterium spiritivorum ATCC 33300]
Length = 146
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFFPD-VVSFA 91
I + + D RYD ++V +HDQ +++ + ++ + D V+GIDE QFF D + +
Sbjct: 3 IFKPSVDIRYDEQRVVSHDQNSISSTPVSNSSAILLLSADTRVVGIDEAQFFDDELPNVC 62
Query: 92 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI-GQ 150
+AN G V+VA LD F+ F I +L+ +AE V K+ AVC+ C A ++ R+
Sbjct: 63 VQLANKGLRVIVAGLDMDFKGKPFGPIPALMAVAEHVTKVHAVCVRCGAPANYSYRLTDN 122
Query: 151 EKEVILG 157
+K+V+LG
Sbjct: 123 DKQVLLG 129
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 45/162 (27%)
Query: 183 IVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDK 242
I + + D RYD ++V +HDQ +++ + ++ + D V+GIDE QF + D+
Sbjct: 3 IFKPSVDIRYDEQRVVSHDQNSISSTPVSNSSAILLLSADTRVVGIDEAQFFD-----DE 57
Query: 243 YMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAAL 302
VC + +AN G V+VA L
Sbjct: 58 LPNVCVQ----------------------------------------LANKGLRVIVAGL 77
Query: 303 DGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
D F+ F I +L+ +AE V K+ AVC+ C A ++ R+
Sbjct: 78 DMDFKGKPFGPIPALMAVAEHVTKVHAVCVRCGAPANYSYRL 119
>gi|402495344|ref|ZP_10842074.1| thymidine kinase [Aquimarina agarilytica ZC1]
Length = 192
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 86/193 (44%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + D RY + V +HD K+ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPMVDTRYSEQNVVSHDHNKISSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+++ T DV+GIDE QF + ++ + VC +
Sbjct: 77 AANIRILADT--CDVVGIDEAQFFD-----EEIVGVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANKGIRVIVAGLDMDFKGQPFGPMPALMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CAKTGNLAHYSHR 162
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDIDVI 76
RR++R Q+A + I + D RY + V +HD K+ T V A +++ T DV+
Sbjct: 33 RRLKRAQFAKQKVEIFKPMVDTRYSEQNVVSHDHNKISSTPVPAAANIRILADT--CDVV 90
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF ++V +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 91 GIDEAQFFDEEIVGVCNDLANKGIRVIVAGLDMDFKGQPFGPMPALMATAEYVTKVHAVC 150
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
A ++ R + ++++
Sbjct: 151 AKTGNLAHYSHRKSTDDDLVM 171
>gi|261420785|ref|YP_003254467.1| thymidine kinase [Geobacillus sp. Y412MC61]
gi|297531580|ref|YP_003672855.1| thymidine kinase [Geobacillus sp. C56-T3]
gi|319768455|ref|YP_004133956.1| thymidine kinase [Geobacillus sp. Y412MC52]
gi|261377242|gb|ACX79985.1| Thymidine kinase [Geobacillus sp. Y412MC61]
gi|297254832|gb|ADI28278.1| Thymidine kinase [Geobacillus sp. C56-T3]
gi|317113321|gb|ADU95813.1| Thymidine kinase [Geobacillus sp. Y412MC52]
Length = 207
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK+ ELIRR+RR Q+A + + D+RY + V +H+ + A+ +
Sbjct: 11 EVICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ + I + DV+ IDE QF SD
Sbjct: 71 PAEMFRYI--SAATDVVAIDEVQFF-----SD---------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL A
Sbjct: 96 ------------DIIDVVQTLADGGCRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q+A + + D+RY + V +H+ + A+ + E+ + I + DV
Sbjct: 27 RRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVATPAEMFRYI--SAATDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D ++ +++A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEVQFFSDDIIDVVQTLADGGCRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|260061408|ref|YP_003194488.1| thymidine kinase [Robiginitalea biformata HTCC2501]
gi|88785540|gb|EAR16709.1| thymidine kinase [Robiginitalea biformata HTCC2501]
Length = 217
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 87/193 (45%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR+RR Q+A + I + D RY + V +HD+ ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAQFARQKVEIFKPIVDTRYHEDYVVSHDENEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ + DV+GIDE QF + D+ + VC +
Sbjct: 77 AANIRLL--ADNCDVVGIDEAQFFD-----DEIVTVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G VVVA LD F+ F + +L+ AE V K+ A+
Sbjct: 109 -------------------LANKGVRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVHAI 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLANYSYR 162
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR+RR Q+A + I + D RY + V +HD+ ++ T V A +L+ +
Sbjct: 30 ELIRRLRRAQFARQKVEIFKPIVDTRYHEDYVVSHDENEIRSTPVPAAANIRLL--ADNC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFF D +V+ +AN G VVVA LD F+ F + +L+ AE V K+
Sbjct: 88 DVVGIDEAQFFDDEIVTVCNDLANKGVRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
A+C A ++ R + ++L
Sbjct: 148 AICTRTGNLANYSYRKSRNDRLVL 171
>gi|255530714|ref|YP_003091086.1| thymidine kinase [Pedobacter heparinus DSM 2366]
gi|255343698|gb|ACU03024.1| Thymidine kinase [Pedobacter heparinus DSM 2366]
Length = 193
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 79/191 (41%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR++R Q A I + D RYD V +HD + +
Sbjct: 18 EVICGSMFSGKTEELLRRLKRAQIAKLNVEIFKPKTDTRYDETAVVSHDLNSIQSTPVEN 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + V+GIDE QF + D VC +
Sbjct: 78 SAAILLLGANTQVVGIDEAQFFD-----DNLPEVCNK----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A G V+VA LD FQ F + +L+ +AE V K+ AVC+
Sbjct: 110 -----------------LAQKGIRVIVAGLDMDFQGKPFGPVPALMAIAELVTKVNAVCV 152
Query: 333 SCFRDAAFTKR 343
C A ++ R
Sbjct: 153 RCGSPAVYSYR 163
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q A I + D RYD V +HD + + ++ + V+GI
Sbjct: 34 RRLKRAQIAKLNVEIFKPKTDTRYDETAVVSHDLNSIQSTPVENSAAILLLGANTQVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D + +A G V+VA LD FQ F + +L+ +AE V K+ AVC+
Sbjct: 94 DEAQFFDDNLPEVCNKLAQKGIRVIVAGLDMDFQGKPFGPVPALMAIAELVTKVNAVCVR 153
Query: 138 CFRDAAFTKRIGQEKEVIL 156
C A ++ R + IL
Sbjct: 154 CGSPAVYSYRTAASESTIL 172
>gi|319648114|ref|ZP_08002331.1| thymidine kinase [Bacillus sp. BT1B_CT2]
gi|317389749|gb|EFV70559.1| thymidine kinase [Bacillus sp. BT1B_CT2]
Length = 194
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRRI+R +A + + A D+RY +E V +H+ + +
Sbjct: 11 ELICGSMFSGKSEELIRRIKRATFAKQEVKVFKPAIDNRYSSESVVSHNGTSIVCHAIAS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + +K+ DVIG+DE QF +
Sbjct: 71 PEEIFQYISKETDVIGVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V S+A+ G V+ A LD F+ F + L+ LAE V KL AVC
Sbjct: 95 ---------ETIVGTLTSLADQGYRVIAAGLDLDFRGEPFGVVPDLMALAETVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRI+R +A + + A D+RY +E V +H+ + + ++ + +K+ DVIG
Sbjct: 27 RRIKRATFAKQEVKVFKPAIDNRYSSESVVSHNGTSIVCHAIASPEEIFQYISKETDVIG 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DE QFF + +V S+A+ G V+ A LD F+ F + L+ LAE V KL AVC
Sbjct: 87 VDEVQFFDETIVGTLTSLADQGYRVIAAGLDLDFRGEPFGVVPDLMALAETVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|52082240|ref|YP_081031.1| thymidine kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|404491125|ref|YP_006715231.1| thymidine kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423684251|ref|ZP_17659090.1| thymidine kinase [Bacillus licheniformis WX-02]
gi|73920098|sp|Q65DU6.1|KITH_BACLD RecName: Full=Thymidine kinase
gi|52005451|gb|AAU25393.1| thymidine kinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52350134|gb|AAU42768.1| thymidine kinase Tdk [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|383441025|gb|EID48800.1| thymidine kinase [Bacillus licheniformis WX-02]
Length = 194
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRRI+R +A + + A D+RY +E V +H+ + +
Sbjct: 11 ELICGSMFSGKSEELIRRIKRATFAKQEVKVFKPAIDNRYSSESVVSHNGTSIVCHAIAS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + +K+ DVIG+DE QF +
Sbjct: 71 PEEIFQYISKETDVIGVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V S+A+ G V+ A LD F+ F + L+ LAE V KL AVC
Sbjct: 95 ---------ETIVGTLTSLADQGYRVIAAGLDLDFRGEPFGVVPDLMALAETVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRI+R +A + + A D+RY +E V +H+ + + ++ + +K+ DVIG
Sbjct: 27 RRIKRATFAKQEVKVFKPAIDNRYSSESVVSHNGTSIVCHAIASPEEIFQYISKETDVIG 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DE QFF + +V S+A+ G V+ A LD F+ F + L+ LAE V KL AVC
Sbjct: 87 VDEVQFFDETIVGTLTSLADQGYRVIAAGLDLDFRGEPFGVVPDLMALAETVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|345433314|dbj|BAK69314.1| thymidine kinase [Bacillus caldovelox]
Length = 207
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK+ ELIRR+RR Q+A + + D+RY + V +H+ + A+ +
Sbjct: 11 EVICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ + I + DV+ IDE QF SD
Sbjct: 71 PAEMFRYI--SAATDVVAIDEVQFF-----SD---------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL A
Sbjct: 96 ------------DIIDVVQTLADCGYRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q+A + + D+RY + V +H+ + A+ + E+ + I + DV
Sbjct: 27 RRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVATPAEMFRYI--SAATDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D ++ +++A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEVQFFSDDIIDVVQTLADCGYRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|256545270|ref|ZP_05472635.1| thymidine kinase [Anaerococcus vaginalis ATCC 51170]
gi|256399097|gb|EEU12709.1| thymidine kinase [Anaerococcus vaginalis ATCC 51170]
Length = 201
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--ID 74
R + R + A Y+ + + + D R++ EK+ +HD +L A+ + +++ + K+ ID
Sbjct: 22 LWRELYRMKVAGYKTIAFKPSVDSRHEDEKIISHDNLELDAIKIESIKEILDYAKNNEID 81
Query: 75 VIGIDEGQFFPDVVS-----FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
IGIDE QFFPD S F E M N IVV + LD ++ F + L+P+A+ +
Sbjct: 82 AIGIDEVQFFPDKPSKIVDYFVELMQNHITIVV-SGLDMDYKTKPFEVVKELMPIADELI 140
Query: 130 KLTAVCMSCFRDA--AFTKRIGQEK 152
K A+C SC DA +F K +E+
Sbjct: 141 KHHAICASCGEDAWVSFRKSYNEER 165
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 56/201 (27%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKTT L R + R + A Y+ + + + D R++ EK+ +HD +L A+ + ++
Sbjct: 12 GSMFSGKTTSLWRELYRMKVAGYKTIAFKPSVDSRHEDEKIISHDNLELDAIKIESIKEI 71
Query: 217 IPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ + K +ID IGIDE QF
Sbjct: 72 LDYAKNNEIDAIGIDEVQF----------------------------------------- 90
Query: 275 PPPPEFPDVVS-----FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
FPD S F E M N I VV+ LD ++ F + L+P+A+ + K A
Sbjct: 91 -----FPDKPSKIVDYFVELMQNHITI-VVSGLDMDYKTKPFEVVKELMPIADELIKHHA 144
Query: 330 VCMSCFRDA--AFTKRIGQEK 348
+C SC DA +F K +E+
Sbjct: 145 ICASCGEDAWVSFRKSYNEER 165
>gi|47459450|ref|YP_016312.1| thymidine kinase [Mycoplasma mobile 163K]
gi|60390016|sp|Q6KH30.1|KITH_MYCMO RecName: Full=Thymidine kinase
gi|47458780|gb|AAT28101.1| thymidine kinase [Mycoplasma mobile 163K]
Length = 200
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 50/203 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV- 211
EVI GPM+SGK+ ELI+RI+ Q+AN + +IV+ D R+ ++ + KL + A
Sbjct: 11 EVITGPMYSGKSEELIKRIKILQFANIKTLIVKQKFDTRFSHNEIVSRSGTKLNTIVASN 70
Query: 212 --ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ K+ +T I IDE QF +
Sbjct: 71 VEEIKKVWNNT--YKAIAIDEVQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++++ + +A+ G V+++ LD F R F + L+ +A+ V KL A
Sbjct: 95 -----------KDIINYIDELASKGIRVIISGLDTDFARKPFGIMPELLAIADDVLKLKA 143
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
VC SC T RI +K+ ++
Sbjct: 144 VCFSCKNAGTHTFRITNDKDQKL 166
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV---ELNKLIPHTKDI 73
+RI+ Q+AN + +IV+ D R+ ++ + KL + A E+ K+ +T
Sbjct: 25 LIKRIKILQFANIKTLIVKQKFDTRFSHNEIVSRSGTKLNTIVASNVEEIKKVWNNT--Y 82
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
I IDE QFF D++++ + +A+ G V+++ LD F R F + L+ +A+ V KL
Sbjct: 83 KAIAIDEVQFFDKDIINYIDELASKGIRVIISGLDTDFARKPFGIMPELLAIADDVLKLK 142
Query: 133 AVCMSCFRDAAFTKRIGQEKE 153
AVC SC T RI +K+
Sbjct: 143 AVCFSCKNAGTHTFRITNDKD 163
>gi|409123686|ref|ZP_11223081.1| thymidine kinase [Gillisia sp. CBA3202]
Length = 213
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 82/191 (42%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R +A + I + A D RY E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRATFAKQKVEIFKPAIDKRYHEEMVVSHDANEIRSTPVPS 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ DV+GIDE QF + D+ + VC +
Sbjct: 77 AANIRILADGCDVVGIDEAQFFD-----DEIVTVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANSGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A F+ R
Sbjct: 152 RTGNLAQFSYR 162
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R +A + I + A D RY E V +HD ++ + + DV+GI
Sbjct: 33 RRLKRATFAKQKVEIFKPAIDKRYHEEMVVSHDANEIRSTPVPSAANIRILADGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN+G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVTVCNDLANSGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFTKR 147
A F+ R
Sbjct: 153 TGNLAQFSYR 162
>gi|405354026|ref|ZP_11023435.1| Thymidine kinase [Chondromyces apiculatus DSM 436]
gi|397092717|gb|EJJ23466.1| Thymidine kinase [Myxococcus sp. (contaminant ex DSM 436)]
Length = 182
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVE--LNKLIPHTKDID 74
RRI+R Y + + + D+RYD V +H QQK+ TA+ E +L P T+
Sbjct: 11 RRIQRAVYGKQKVQVFKPRIDNRYDDSAVVSHSQQKVLSTAIERAEEIFYRLAPDTQ--- 67
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF +VV+ E++AN G V+ A LD +Q F + L+ ++E V K A
Sbjct: 68 VVGIDEVQFFGSEVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLMAVSEYVTKELA 127
Query: 134 VCMSCFRDAAFTKRIGQEKE-VILG 157
+C+ C A ++RI E V++G
Sbjct: 128 ICVVCGNPANRSQRIVSSGERVVVG 152
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 52/190 (27%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSAVE--LN 214
MFSGKT ELIRRI+R Y + + + D+RYD V +H QQK+ TA+ E
Sbjct: 1 MFSGKTEELIRRIQRAVYGKQKVQVFKPRIDNRYDDSAVVSHSQQKVLSTAIERAEEIFY 60
Query: 215 KLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+L P D V+GIDE QF GS
Sbjct: 61 RLAP---DTQVVGIDEVQFF----GS---------------------------------- 79
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
+VV+ E++AN G V+ A LD +Q F + L+ ++E V K A+C+ C
Sbjct: 80 -------EVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLMAVSEYVTKELAICVVC 132
Query: 335 FRDAAFTKRI 344
A ++RI
Sbjct: 133 GNPANRSQRI 142
>gi|374596034|ref|ZP_09669038.1| Thymidine kinase [Gillisia limnaea DSM 15749]
gi|373870673|gb|EHQ02671.1| Thymidine kinase [Gillisia limnaea DSM 15749]
Length = 213
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 82/191 (42%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RY E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPAIDKRYHEEMVVSHDANEIRSTPVPS 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ DV+GIDE QF + D+ + VC +
Sbjct: 77 AATIRLMADGCDVVGIDEAQFFD-----DEIVTVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGVRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A F+ R
Sbjct: 152 RTGNLAQFSYR 162
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY E V +HD ++ + + DV+GI
Sbjct: 33 RRLKRAKFAKQKVEIFKPAIDKRYHEEMVVSHDANEIRSTPVPSAATIRLMADGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVTVCNDLANRGVRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFTKRIGQEKEVIL 156
A F+ R +++
Sbjct: 153 TGNLAQFSYRKASNDDLVF 171
>gi|418328401|ref|ZP_12939514.1| thymidine kinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|365232000|gb|EHM73015.1| thymidine kinase [Staphylococcus epidermidis 14.1.R1.SE]
Length = 161
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Query: 32 MIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDVIGIDEGQFFPD-VVS 89
++ + A DDRY EKV +H+ ++ A++ +++ H ++++VIGIDE QFF D +V+
Sbjct: 2 VVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNVIGIDEVQFFEDDIVN 61
Query: 90 FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
E +A G V+VA LD F+ F + L+ ++E + KL AVC C ++ T+R+
Sbjct: 62 IVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRL 120
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 46/164 (28%)
Query: 182 MIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHT-KDIDVIGIDEGQFVEVIGGS 240
++ + A DDRY EKV +H+ ++ A++ +++ H ++++VIGIDE QF E
Sbjct: 2 VVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNVIGIDEVQFFE----- 56
Query: 241 DKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVA 300
D+V+ E +A G V+VA
Sbjct: 57 ----------------------------------------DDIVNIVEKLAENGHRVIVA 76
Query: 301 ALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
LD F+ F + L+ ++E + KL AVC C ++ T+R+
Sbjct: 77 GLDMDFRGEPFKPMPKLLAVSEHITKLQAVCSVCGSPSSRTQRL 120
>gi|429751054|ref|ZP_19284022.1| thymidine kinase [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429162810|gb|EKY05093.1| thymidine kinase [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 200
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 86/200 (43%), Gaps = 45/200 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A R I + + D RYD + +H+ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAQFAKQRVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DV+GIDE QF + D+ + VC
Sbjct: 77 AASILLLADGCDVVGIDEAQFFD-----DEIVNVCN------------------------ 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++AN G V+VA LD ++ F + +L+ AE V K+ AVC
Sbjct: 108 ----------------ALANRGVRVIVAGLDMDYKGRPFGPMPNLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
A ++ R E R+
Sbjct: 152 HTGNLAHYSYRKVANNEQRM 171
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A R I + + D RYD + +H+ ++ + ++ DV+GI
Sbjct: 33 RRLRRAQFAKQRVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEAAASILLLADGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ ++AN G V+VA LD ++ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVNVCNALANRGVRVIVAGLDMDYKGRPFGPMPNLMATAEYVTKVHAVCTH 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ ++ +LG
Sbjct: 153 TGNLAHYSYRKVANNEQRMLG 173
>gi|335427735|ref|ZP_08554655.1| thymidine kinase [Haloplasma contractile SSD-17B]
gi|335429174|ref|ZP_08556076.1| thymidine kinase [Haloplasma contractile SSD-17B]
gi|334890254|gb|EGM28526.1| thymidine kinase [Haloplasma contractile SSD-17B]
gi|334893661|gb|EGM31870.1| thymidine kinase [Haloplasma contractile SSD-17B]
Length = 196
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI+R +YA ++ + D+RY E V +H+ + ++
Sbjct: 11 EVISGSMFAGKTEELIRRIKRLEYAKKNILVFKPEIDNRYSDEDVVSHNGTSIKSIVIKC 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++I + D DV+ IDE QF +
Sbjct: 71 AKEIINYIDDHTDVVAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
VV + +A+ G VVVA LD F+ F + L+ AE V KLTA+C
Sbjct: 95 ---------ESVVQVVDYLADHGIRVVVAGLDRDFRGESFGTMPELLTKAEFVTKLTAIC 145
Query: 332 MSCFRDAAFTKRI 344
C A T+R+
Sbjct: 146 TKCGAPATRTQRL 158
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRI+R +YA ++ + D+RY E V +H+ + ++ ++I + D DV+
Sbjct: 27 RRIKRLEYAKKNILVFKPEIDNRYSDEDVVSHNGTSIKSIVIKCAKEIINYIDDHTDVVA 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + VV + +A+ G VVVA LD F+ F + L+ AE V KLTA+C
Sbjct: 87 IDEVQFFDESVVQVVDYLADHGIRVVVAGLDRDFRGESFGTMPELLTKAEFVTKLTAICT 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGAPATRTQRL 158
>gi|345433310|dbj|BAK69312.1| thymidine kinase [Bacillus caldolyticus]
Length = 207
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGK+ ELIRR+RR Q+A + + D+RY + V +H+ + A+ +
Sbjct: 11 EVICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ + I + DV+ IDE QF SD
Sbjct: 71 PAEMFRYI--SAATDVVAIDEIQFF-----SD---------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL A
Sbjct: 96 ------------DIIDVVQTLADCGYRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q+A + + D+RY + V +H+ + A+ + E+ + I + DV
Sbjct: 27 RRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVATPAEMFRYI--SAATDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D ++ +++A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEIQFFSDDIIDVVQTLADCGYRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|431796832|ref|YP_007223736.1| thymidine kinase [Echinicola vietnamensis DSM 17526]
gi|430787597|gb|AGA77726.1| thymidine kinase [Echinicola vietnamensis DSM 17526]
Length = 194
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+ R A + I + + D RY V +H++ + +
Sbjct: 20 EVICGSMFSGKTEELIRRLNRALIAKQKVEIFKPSLDTRYHDRDVVSHNETVIRSTPVQF 79
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ D DV+GIDE QF + KQ
Sbjct: 80 ADDIMLLAGDCDVVGIDEVQFFD----------------KQ------------------- 104
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +A AGK V++A LD F+ F+ + L+ AE V K+ A+CM
Sbjct: 105 ----------IVHVANKLAIAGKRVIMAGLDMDFEGKPFDPMPQLLASAEYVTKVHAICM 154
Query: 333 SCFRDAAFTKRIGQEKE 349
C A+++ R+ KE
Sbjct: 155 KCGDLASYSYRLTPAKE 171
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + + D RY V +H++ + + + ++ D DV+GI
Sbjct: 36 RRLNRALIAKQKVEIFKPSLDTRYHDRDVVSHNETVIRSTPVQFADDIMLLAGDCDVVGI 95
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V A +A AGK V++A LD F+ F+ + L+ AE V K+ A+CM
Sbjct: 96 DEVQFFDKQIVHVANKLAIAGKRVIMAGLDMDFEGKPFDPMPQLLASAEYVTKVHAICMK 155
Query: 138 CFRDAAFTKRIGQEKE-VILG 157
C A+++ R+ KE V+LG
Sbjct: 156 CGDLASYSYRLTPAKEKVVLG 176
>gi|374287502|ref|YP_005034587.1| thymidine kinase [Bacteriovorax marinus SJ]
gi|301166043|emb|CBW25617.1| thymidine kinase [Bacteriovorax marinus SJ]
Length = 213
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 86/194 (44%), Gaps = 50/194 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EV+ GPMFSGKT ELIRR+RR Q A + I + A DDRY KV +H Q + A S
Sbjct: 14 EVVCGPMFSGKTEELIRRVRRAQIAKQKIQIFKPALDDRYHETKVVSHSSQSVAATPVNS 73
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
AV++ K I + I + IDE QF +EN
Sbjct: 74 AVDILKRIYDSTRI--VAIDEVQFF--------------------------------DEN 99
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++ ++ G V++A LD ++ F + L+ +A+ V K+ A
Sbjct: 100 -------------IIKVVNKLSRRGVRVILAGLDQDYKGEPFGPMPHLMAIADDVTKVKA 146
Query: 330 VCMSCFRDAAFTKR 343
VC SC A+ T R
Sbjct: 147 VCTSCGAPASKTHR 160
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDI 73
RR+RR Q A + I + A DDRY KV +H Q + A SAV++ K I + I
Sbjct: 28 LIRRVRRAQIAKQKIQIFKPALDDRYHETKVVSHSSQSVAATPVNSAVDILKRIYDSTRI 87
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+ IDE QFF +++ ++ G V++A LD ++ F + L+ +A+ V K+
Sbjct: 88 --VAIDEVQFFDENIIKVVNKLSRRGVRVILAGLDQDYKGEPFGPMPHLMAIADDVTKVK 145
Query: 133 AVCMSCFRDAAFTKR 147
AVC SC A+ T R
Sbjct: 146 AVCTSCGAPASKTHR 160
>gi|313206650|ref|YP_004045827.1| thymidine kinase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383485955|ref|YP_005394867.1| thymidine kinase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|386321365|ref|YP_006017527.1| thymidine kinase [Riemerella anatipestifer RA-GD]
gi|407451496|ref|YP_006723220.1| thymidine kinase [Riemerella anatipestifer RA-CH-1]
gi|416112211|ref|ZP_11593176.1| thymidine kinase [Riemerella anatipestifer RA-YM]
gi|442314141|ref|YP_007355444.1| Thymidine kinase [Riemerella anatipestifer RA-CH-2]
gi|312445966|gb|ADQ82321.1| Thymidine kinase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|315022147|gb|EFT35176.1| thymidine kinase [Riemerella anatipestifer RA-YM]
gi|325335908|gb|ADZ12182.1| Thymidine kinase [Riemerella anatipestifer RA-GD]
gi|380460640|gb|AFD56324.1| thymidine kinase [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|403312481|gb|AFR35322.1| Thymidine kinase [Riemerella anatipestifer RA-CH-1]
gi|441483064|gb|AGC39750.1| Thymidine kinase [Riemerella anatipestifer RA-CH-2]
Length = 195
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A I + D RY E V +H++ K+ + +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAEMAGLNVEIFKPKLDTRYSEEDVVSHNRNKIRSTAVDT 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
N+++ + DV+GIDE QF +
Sbjct: 77 PNEILLLGSNCDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN G VV+A LD F+ F + L+ AE V K+ A+C
Sbjct: 100 --------QGIVEVANQLANNGVRVVIAGLDMDFKGRPFGPMPYLMATAEYVTKVHAICK 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
A ++ R +++
Sbjct: 152 RTGNLANYSMRTSTSQDL 169
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR+RR + A I + D RY E V +H++ K+ + + N+++ + DV+
Sbjct: 31 LIRRLRRAEMAGLNVEIFKPKLDTRYSEEDVVSHNRNKIRSTAVDTPNEILLLGSNCDVV 90
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF +V A +AN G VV+A LD F+ F + L+ AE V K+ A+C
Sbjct: 91 GIDEAQFFDQGIVEVANQLANNGVRVVIAGLDMDFKGRPFGPMPYLMATAEYVTKVHAIC 150
Query: 136 MSCFRDAAFTKRIGQEKEVI 155
A ++ R ++++
Sbjct: 151 KRTGNLANYSMRTSTSQDLV 170
>gi|451344486|ref|ZP_21913543.1| hypothetical protein HMPREF9943_01768 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449336764|gb|EMD15935.1| hypothetical protein HMPREF9943_01768 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 202
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI +A ++ + DDRY T ++ +H K++ V +
Sbjct: 11 EVICGCMFAGKTEELIRRINVLTFAKKNIIVFKPKVDDRYSTTEIVSHAGAKVSCVVVEK 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ ++ K D DV+ IDE QF +
Sbjct: 71 SSDILNRIKVDTDVVAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V E +A++G V+VA LD F+ F + L+ AE V KLTAVC
Sbjct: 95 ---------KDIVDVCEYLADSGLRVMVAGLDKDFRGEPFGVLPDLLTRAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A T+R+
Sbjct: 146 AKCGAPATRTQRM 158
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI +A ++ + DDRY T ++ +H K++ V + + ++ K D DV+
Sbjct: 27 RRINVLTFAKKNIIVFKPKVDDRYSTTEIVSHAGAKVSCVVVEKSSDILNRIKVDTDVVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V E +A++G V+VA LD F+ F + L+ AE V KLTAVC
Sbjct: 87 IDEVQFFDKDIVDVCEYLADSGLRVMVAGLDKDFRGEPFGVLPDLLTRAEFVTKLTAVCA 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGAPATRTQRM 158
>gi|375148232|ref|YP_005010673.1| thymidine kinase [Niastella koreensis GR20-10]
gi|361062278|gb|AEW01270.1| Thymidine kinase [Niastella koreensis GR20-10]
Length = 193
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 81/191 (42%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R + AN R I + D RYD + +HD+ + +
Sbjct: 16 EVICGSMFSGKTEELIRRLKRAKIANLRVEIFKPKIDVRYDVHNIVSHDENAILSTPIDN 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + DVIGIDE QF +
Sbjct: 76 SQTILLLHNEADVIGIDEAQFFD------------------------------------- 98
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+ PDV + +A G V+VA LD + F I L+ A+ + KL A+C+
Sbjct: 99 -----DQLPDV---CDQLALRGHRVIVAGLDMDYTGKPFGQIPFLLSKADYITKLHAICV 150
Query: 333 SCFRDAAFTKR 343
C A ++ R
Sbjct: 151 KCGHIANYSFR 161
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R + AN R I + D RYD + +HD+ + + ++ + DVIGI
Sbjct: 32 RRLKRAKIANLRVEIFKPKIDVRYDVHNIVSHDENAILSTPIDNSQTILLLHNEADVIGI 91
Query: 79 DEGQFFPDVV-SFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D + + +A G V+VA LD + F I L+ A+ + KL A+C+
Sbjct: 92 DEAQFFDDQLPDVCDQLALRGHRVIVAGLDMDYTGKPFGQIPFLLSKADYITKLHAICVK 151
Query: 138 CFRDAAFTKRIGQEK-EVILG 157
C A ++ R +K +V+LG
Sbjct: 152 CGHIANYSFRKKADKTQVLLG 172
>gi|17158497|ref|NP_477917.1| wsv395 [Shrimp white spot syndrome virus]
gi|17016791|gb|AAL33397.1| wsv395 [shrimp white spot syndrome virus]
gi|417072623|gb|AFX59772.1| wsv395 [White spot syndrome virus]
Length = 398
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
Query: 27 ANYRCMIVRYAKDDRYD--TEKVATHDQQKL---TAVSAV-ELNKLIPHTKDIDVIGIDE 80
N C+ V+++ + RY T + TH + + T VS++ EL ++P +DVI IDE
Sbjct: 40 GNKHCLFVKHSLETRYGCGTGTIVTHAGEVIEGCTTVSSIKELISVLPEV--VDVILIDE 97
Query: 81 GQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-- 138
GQFF D+V +A+ GK +V+AALDGT + F+ I L+P + KL + CM C
Sbjct: 98 GQFFTDLV-LVNRLADKGKRIVIAALDGTSDQQMFSPIHKLLPYTNSIVKLASKCMICKI 156
Query: 139 -FRDAAFTKRIGQEKE 153
++A FT R G + +
Sbjct: 157 DTKEAPFTVRFGNDND 172
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 58/206 (28%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY--DTEKVSTHDQQKL---TA 207
E++ GPMF+GK+T L ++ N C+ V+++ + RY T + TH + + T
Sbjct: 16 ELVTGPMFAGKSTYLKNIYQQENGGNKHCLFVKHSLETRYGCGTGTIVTHAGEVIEGCTT 75
Query: 208 VSAV-ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
VS++ EL ++P +DVI IDEGQF
Sbjct: 76 VSSIKELISVLPEV--VDVILIDEGQF--------------------------------- 100
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
F D+V +A+ GK +V+AALDGT + F+ I L+P + K
Sbjct: 101 -------------FTDLV-LVNRLADKGKRIVIAALDGTSDQQMFSPIHKLLPYTNSIVK 146
Query: 327 LTAVCMSC---FRDAAFTKRIGQEKE 349
L + CM C ++A FT R G + +
Sbjct: 147 LASKCMICKIDTKEAPFTVRFGNDND 172
>gi|325846457|ref|ZP_08169372.1| thymidine kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481215|gb|EGC84256.1| thymidine kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 201
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--ID 74
R + R + A Y+ + + + D R++ EK+ +HD +L A+ + + ++K+ ID
Sbjct: 22 LWRELYRMKIAGYKTVAFKPSVDSRHEDEKIVSHDNLELDAIKINSIKDIFEYSKNNQID 81
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
IGIDE QFFPD +V + + N+ +VV+ LD ++ F + L+P+A+ + K
Sbjct: 82 AIGIDEVQFFPDDPSEIVDYFIKLMNSHITIVVSGLDMDYKARPFEIVKELMPIADELIK 141
Query: 131 LTAVCMSCFRDAAFTKR 147
A+C SC DA + R
Sbjct: 142 HHAICASCGEDAWVSFR 158
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 44/192 (22%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
V G MFSGKTT L R + R + A Y+ + + + D R++ EK+ +HD +L A+ +
Sbjct: 9 VHTGSMFSGKTTSLWRELYRMKIAGYKTVAFKPSVDSRHEDEKIVSHDNLELDAIKINSI 68
Query: 214 NKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ ++K+ ID IGIDE QF
Sbjct: 69 KDIFEYSKNNQIDAIGIDEVQFF------------------------------------- 91
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
P + ++V + + N+ +VV+ LD ++ F + L+P+A+ + K A+C
Sbjct: 92 -----PDDPSEIVDYFIKLMNSHITIVVSGLDMDYKARPFEIVKELMPIADELIKHHAIC 146
Query: 332 MSCFRDAAFTKR 343
SC DA + R
Sbjct: 147 ASCGEDAWVSFR 158
>gi|448296725|ref|ZP_21486778.1| thymidine kinase [Halalkalicoccus jeotgali B3]
gi|445580857|gb|ELY35227.1| thymidine kinase [Halalkalicoccus jeotgali B3]
Length = 195
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 41/192 (21%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT EL+RR+RR + A + + A DDRY V TH+ ++
Sbjct: 11 EVIAGCMFAGKTEELLRRLRRAEIAGQEVAVFKPATDDRYGKATVGTHNGRQW------- 63
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
D DVIG D + V I D+ +Q I + F +
Sbjct: 64 ---------DADVIGTD-AEAVRAI--PDRLNG------EQVVAIDEANFFS-------- 97
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
P +V E +AN G+ V+V+ D TF+ F + L+ +AE VEK A+C
Sbjct: 98 --------PALVDVCEELANDGRRVIVSGTDQTFRGEPFEPLPQLLAIAEYVEKFQAICS 149
Query: 333 SCFRDAAFTKRI 344
C A+ +R+
Sbjct: 150 VCGEPASRNQRL 161
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA---VSAVELNKLIPHTKD 72
RR+RR + A + + A DDRY V TH+ ++ A + E + IP +
Sbjct: 24 ELLRRLRRAEIAGQEVAVFKPATDDRYGKATVGTHNGRQWDADVIGTDAEAVRAIPDRLN 83
Query: 73 ID-VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+ V+ IDE FF P +V E +AN G+ V+V+ D TF+ F + L+ +AE VEK
Sbjct: 84 GEQVVAIDEANFFSPALVDVCEELANDGRRVIVSGTDQTFRGEPFEPLPQLLAIAEYVEK 143
Query: 131 LTAVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 144 FQAICSVCGEPASRNQRL 161
>gi|440751172|ref|ZP_20930407.1| Thymidine kinase [Mariniradius saccharolyticus AK6]
gi|436480211|gb|ELP36463.1| Thymidine kinase [Mariniradius saccharolyticus AK6]
Length = 168
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + + D RY V +H++ + + + +I D DV+GI
Sbjct: 11 RRLNRALIARQKVEIFKPSIDKRYHDFDVVSHNENAIRSTPVNFADDIILLAGDCDVVGI 70
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V A+ +ANAGK V++A LD F F + L+ +AE V K+ A+CM
Sbjct: 71 DEVQFFDQRIVEVADILANAGKRVILAGLDMDFAGKPFEPMPQLLAIAEYVTKVHAICMK 130
Query: 138 CFRDAAFTKRI-GQEKEVILG 157
C A+++ R+ + +V+LG
Sbjct: 131 CGNLASYSYRLTAAQDKVLLG 151
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 45/186 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR+ R A + I + + D RY V +H++ + + + +I
Sbjct: 1 MFSGKTEELIRRLNRALIARQKVEIFKPSIDKRYHDFDVVSHNENAIRSTPVNFADDIIL 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
D DV+GIDE QF + Q+
Sbjct: 61 LAGDCDVVGIDEVQF-----------------FDQR------------------------ 79
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
+V A+ +ANAGK V++A LD F F + L+ +AE V K+ A+CM C A
Sbjct: 80 ----IVEVADILANAGKRVILAGLDMDFAGKPFEPMPQLLAIAEYVTKVHAICMKCGNLA 135
Query: 339 AFTKRI 344
+++ R+
Sbjct: 136 SYSYRL 141
>gi|124009595|ref|ZP_01694268.1| thymidine kinase [Microscilla marina ATCC 23134]
gi|123984736|gb|EAY24716.1| thymidine kinase [Microscilla marina ATCC 23134]
Length = 212
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R + A + I + A D R+ V +H+ + + +++ + DV+GI
Sbjct: 35 RRVKRAKIAKQQVAIFKPAIDTRFHARHVVSHNANAVMSTPVPSSQEILKNIDKCDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++ + +AN G V+VA LD FQ F + L+ +AE V K+ A+C++
Sbjct: 95 DEAQFFDEGIIDVSIELANRGIRVIVAGLDMDFQGKPFGPMPHLMAVAEYVTKVHAICVT 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A ++ R + +++V+LG
Sbjct: 155 CGDIAHYSHRLVSSDEKVVLG 175
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 45/197 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R + A + I + A D R+ V +H+ + +
Sbjct: 19 EVVCGSMFSGKTEELIRRVKRAKIAKQQVAIFKPAIDTRFHARHVVSHNANAVMSTPVPS 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ + DV+GIDE QF +
Sbjct: 79 SQEILKNIDKCDVVGIDEAQFFD------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
++ + +AN G V+VA LD FQ F + L+ +AE V K+ A+C+
Sbjct: 102 --------EGIIDVSIELANRGIRVIVAGLDMDFQGKPFGPMPHLMAVAEYVTKVHAICV 153
Query: 333 SCFRDAAFTKRIGQEKE 349
+C A ++ R+ E
Sbjct: 154 TCGDIAHYSHRLVSSDE 170
>gi|255558956|ref|XP_002520501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540343|gb|EEF41914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 383
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 49 THDQQKLTAVSAVELNKL-----IPHTKDIDVIGIDEGQFFPDVVSFAESMANA-GKIVV 102
THD KL V+ L+ + +DVIGIDE QFF D+ F A+ GK V+
Sbjct: 230 THDGVKLPCVALSNLSSFRQTFGSDAYEQLDVIGIDEAQFFEDLYDFCREAADHDGKTVI 289
Query: 103 VAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEK--EVILGP 158
VA LDG + R F +L +IPLA+ V KLTA C C + A FT R ++ EVI G
Sbjct: 290 VAGLDGDYLRRSFGSVLDIIPLADSVTKLTARCEFCGKRAFFTLRKTEDTRIEVIGGA 347
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 259 RSPFKTLANENA-ALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILS 316
R F + A E + + F D+ F A+ GK V+VA LDG + R F +L
Sbjct: 248 RQTFGSDAYEQLDVIGIDEAQFFEDLYDFCREAADHDGKTVIVAGLDGDYLRRSFGSVLD 307
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRIE 353
+IPLA+ V KLTA C C + A FT R + ++ RIE
Sbjct: 308 IIPLADSVTKLTARCEFCGKRAFFTLR--KTEDTRIE 342
>gi|442322498|ref|YP_007362519.1| thymidine kinase [Myxococcus stipitatus DSM 14675]
gi|441490140|gb|AGC46835.1| thymidine kinase [Myxococcus stipitatus DSM 14675]
Length = 199
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 53/205 (25%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
F K IG EVI G MFSGKT ELIRR++R Y + + + D+RYD +V +H +
Sbjct: 4 FPKDIGW-IEVICGSMFSGKTEELIRRVQRAVYGKQKVQVFKPRIDNRYDETQVVSHSKL 62
Query: 204 KLTAVS---AVEL-NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
K+T+ A E+ KL P D V+GIDE QF
Sbjct: 63 KVTSTPLERAEEIFYKLEP---DTQVVGIDEVQFFGA----------------------- 96
Query: 260 SPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 319
+VV+ E++AN G V+ A LD +Q F + L+
Sbjct: 97 ----------------------EVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLMA 134
Query: 320 LAECVEKLTAVCMSCFRDAAFTKRI 344
+AE V K A+C+ C A ++R+
Sbjct: 135 VAEYVTKELAICVVCGNPANRSQRL 159
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 9/145 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVEL-NKLIPHTKDID 74
RR++R Y + + + D+RYD +V +H + K+T+ A E+ KL P D
Sbjct: 28 RRVQRAVYGKQKVQVFKPRIDNRYDETQVVSHSKLKVTSTPLERAEEIFYKLEP---DTQ 84
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF +VV+ E++AN G V+ A LD +Q F + L+ +AE V K A
Sbjct: 85 VVGIDEVQFFGAEVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLMAVAEYVTKELA 144
Query: 134 VCMSCFRDAAFTKRIGQEKE-VILG 157
+C+ C A ++R+ E V++G
Sbjct: 145 ICVVCGNPANRSQRLVSSGERVVVG 169
>gi|423315889|ref|ZP_17293794.1| hypothetical protein HMPREF9699_00365 [Bergeyella zoohelcum ATCC
43767]
gi|405585605|gb|EKB59429.1| hypothetical protein HMPREF9699_00365 [Bergeyella zoohelcum ATCC
43767]
Length = 183
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A I + D RY E V +H++ K+ + +
Sbjct: 2 EVICGSMFSGKTEELIRRLRRAEMAGQNVEIFKPKLDTRYSEEDVVSHNRNKIPSTAVET 61
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++++ + DV+GIDE QF +
Sbjct: 62 PDEILLLGSNCDVVGIDEAQFFD------------------------------------- 84
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN+G VV+A LD F F + L+ AE V K+ A+C
Sbjct: 85 --------ESIVEVANQLANSGVRVVIAGLDMDFMGRPFGPMPFLMATAEYVTKVHAICK 136
Query: 333 SCFRDAAFTKRIGQEKEV 350
A ++ R K++
Sbjct: 137 RTGNLANYSMRTSTSKDL 154
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR+RR + A I + D RY E V +H++ K+ + + ++++ + DV
Sbjct: 15 ELIRRLRRAEMAGQNVEIFKPKLDTRYSEEDVVSHNRNKIPSTAVETPDEILLLGSNCDV 74
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF + +V A +AN+G VV+A LD F F + L+ AE V K+ A+
Sbjct: 75 VGIDEAQFFDESIVEVANQLANSGVRVVIAGLDMDFMGRPFGPMPFLMATAEYVTKVHAI 134
Query: 135 CMSCFRDAAFTKRIGQEKEVI 155
C A ++ R K+++
Sbjct: 135 CKRTGNLANYSMRTSTSKDLV 155
>gi|11875610|gb|AAG40728.1|AF272669_1 thymidine kinase [White spot syndrome virus]
gi|15021563|gb|AAK77840.1|AF369029_171 ORF171, putative chimeric thymidine kinase - thymidylate kinase
[shrimp white spot syndrome virus]
gi|19482046|gb|AAL89322.1| WSSV454 [shrimp white spot syndrome virus]
Length = 388
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
Query: 27 ANYRCMIVRYAKDDRYD--TEKVATHDQQKL---TAVSAV-ELNKLIPHTKDIDVIGIDE 80
N C+ V+++ + RY T + TH + + T VS++ EL ++P +DVI IDE
Sbjct: 30 GNKHCLFVKHSLETRYGCGTGTIVTHAGEVIEGCTTVSSIKELISVLPEV--VDVILIDE 87
Query: 81 GQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-- 138
GQFF D+V +A+ GK +V+AALDGT + F+ I L+P + KL + CM C
Sbjct: 88 GQFFTDLV-LVNRLADKGKRIVIAALDGTSDQQMFSPIHKLLPYTNSIVKLASKCMICKI 146
Query: 139 -FRDAAFTKRIGQEKE 153
++A FT R G + +
Sbjct: 147 DTKEAPFTVRFGNDND 162
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 58/206 (28%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY--DTEKVSTHDQQKL---TA 207
E++ GPMF+GK+T L ++ N C+ V+++ + RY T + TH + + T
Sbjct: 6 ELVTGPMFAGKSTYLKNIYQQENGGNKHCLFVKHSLETRYGCGTGTIVTHAGEVIEGCTT 65
Query: 208 VSAV-ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
VS++ EL ++P +DVI IDEGQF
Sbjct: 66 VSSIKELISVLPEV--VDVILIDEGQF--------------------------------- 90
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
F D+V +A+ GK +V+AALDGT + F+ I L+P + K
Sbjct: 91 -------------FTDLV-LVNRLADKGKRIVIAALDGTSDQQMFSPIHKLLPYTNSIVK 136
Query: 327 LTAVCMSC---FRDAAFTKRIGQEKE 349
L + CM C ++A FT R G + +
Sbjct: 137 LASKCMICKIDTKEAPFTVRFGNDND 162
>gi|298207070|ref|YP_003715249.1| thymidine kinase [Croceibacter atlanticus HTCC2559]
gi|83849704|gb|EAP87572.1| thymidine kinase [Croceibacter atlanticus HTCC2559]
Length = 214
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R ++A + I + A D RYD + V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKFARQKVEIFKPAIDVRYDEDMVVSHDANEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ DV+GIDE QF + D+ +AVC +
Sbjct: 77 AANIRLL--ADGCDVVGIDEAQFFD-----DEIVAVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANKGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLAQYSFR 162
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R ++A + I + A D RYD + V +HD ++ T V A +L+
Sbjct: 30 ELIRRLKRAKFARQKVEIFKPAIDVRYDEDMVVSHDANEIRSTPVPAAANIRLL--ADGC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+
Sbjct: 88 DVVGIDEAQFFDDEIVAVCNDLANKGIRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFTKRIGQ-EKEVILG 157
AVC A ++ R + +K V+LG
Sbjct: 148 AVCTRTGNLAQYSFRKSENDKLVMLG 173
>gi|429754152|ref|ZP_19286895.1| thymidine kinase [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429170286|gb|EKY11981.1| thymidine kinase [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 197
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 45/179 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + A D RYD + +H+ ++ +
Sbjct: 18 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPAFDTRYDDTNIVSHNANEIPSTPVEA 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ DV+GIDE QF + D+ + VC E
Sbjct: 78 ASSIMLLADGCDVVGIDEAQFFD-----DEIVNVCNE----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 110 -----------------LANRGMRVIVAGLDMDYKGRPFGPMPFLMATAEYVTKVHAVC 151
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + A D RYD + +H+ ++ + + ++ DV+GI
Sbjct: 34 RRLRRAQFAKQKVEIFKPAFDTRYDDTNIVSHNANEIPSTPVEAASSIMLLADGCDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 94 DEAQFFDDEIVNVCNELANRGMRVIVAGLDMDYKGRPFGPMPFLMATAEYVTKVHAVCTR 153
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ +++ +LG
Sbjct: 154 TGNLANYSFRKVANDQQRMLG 174
>gi|345884567|ref|ZP_08835971.1| hypothetical protein HMPREF0666_02147 [Prevotella sp. C561]
gi|345042560|gb|EGW46656.1| hypothetical protein HMPREF0666_02147 [Prevotella sp. C561]
Length = 589
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + + D RY E V +HDQ + +
Sbjct: 31 EVICGSMFSGKTEELIRRMKRAKFAKQKVEIFKPSIDTRYSDEDVVSHDQNSIHSTPIDS 90
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DIDV+GIDE QF++ + VC +
Sbjct: 91 SGNILLLASDIDVVGIDEAQFLD-----EGLTEVCNK----------------------- 122
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A G V+VA LD ++ F I +L +A+ V K+ A+C+
Sbjct: 123 -----------------LAYNGVRVIVAGLDMDYKGVPFGPIPALCAIADEVTKVHAICV 165
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 166 KCGALAYVSHRL 177
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + + D RY E V +HDQ + + ++ DIDV+GI
Sbjct: 47 RRMKRAKFAKQKVEIFKPSIDTRYSDEDVVSHDQNSIHSTPIDSSGNILLLASDIDVVGI 106
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + + +A G V+VA LD ++ F I +L +A+ V K+ A+C+
Sbjct: 107 DEAQFLDEGLTEVCNKLAYNGVRVIVAGLDMDYKGVPFGPIPALCAIADEVTKVHAICVK 166
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R I + V+LG
Sbjct: 167 CGALAYVSHRLIADNRRVMLG 187
>gi|213963253|ref|ZP_03391510.1| thymidine kinase [Capnocytophaga sputigena Capno]
gi|213954115|gb|EEB65440.1| thymidine kinase [Capnocytophaga sputigena Capno]
Length = 196
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 45/179 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + A D RYD + +H+ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPAFDTRYDDTNIVSHNANEIPSTPVEA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ DV+GIDE QF + D+ + VC E
Sbjct: 77 ASSIMLLADGCDVVGIDEAQFFD-----DEIVNVCNE----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGMRVIVAGLDMDYKGRPFGPMPFLMATAEYVTKVHAVC 150
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + A D RYD + +H+ ++ + + ++ DV+GI
Sbjct: 33 RRLRRAQFAKQKVEIFKPAFDTRYDDTNIVSHNANEIPSTPVEAASSIMLLADGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVNVCNELANRGMRVIVAGLDMDYKGRPFGPMPFLMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ +++ +LG
Sbjct: 153 TGNLANYSFRKVANDQQRMLG 173
>gi|218295560|ref|ZP_03496373.1| Thymidine kinase [Thermus aquaticus Y51MC23]
gi|218244192|gb|EED10718.1| Thymidine kinase [Thermus aquaticus Y51MC23]
Length = 192
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 46/200 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPMFSGK+ ELIRR+RR A ++ + D+RY V +HD +++ A+
Sbjct: 12 EVIVGPMFSGKSEELIRRVRRALIARQSVLVFKPRLDNRYHESHVVSHDGKQVAAIPVES 71
Query: 213 LNKLIPHTKDI-DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H + V+ +DE QF++
Sbjct: 72 AAEMEAHLDPLPQVVAVDEVQFLDR----------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ E +A G V++A LD F+ F + L+ AE VEKL+A+C
Sbjct: 97 ----------GLLPLVERLAAQGVRVILAGLDLDFRGEPFGLMPELLARAEFVEKLSAIC 146
Query: 332 MSCFRDAAFTKRIGQEKEVR 351
C A T+R+ K R
Sbjct: 147 PRCGAPATRTQRLVNGKPAR 166
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-DV 75
RR+RR A ++ + D+RY V +HD +++ A+ ++ H + V
Sbjct: 26 LIRRVRRALIARQSVLVFKPRLDNRYHESHVVSHDGKQVAAIPVESAAEMEAHLDPLPQV 85
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ +DE QF ++ E +A G V++A LD F+ F + L+ AE VEKL+A+
Sbjct: 86 VAVDEVQFLDRGLLPLVERLAAQGVRVILAGLDLDFRGEPFGLMPELLARAEFVEKLSAI 145
Query: 135 CMSCFRDAAFTKRI 148
C C A T+R+
Sbjct: 146 CPRCGAPATRTQRL 159
>gi|344205378|ref|YP_004790520.1| thymidine kinase [Mycoplasma putrefaciens KS1]
gi|343957301|gb|AEM69016.1| thymidine kinase [Mycoplasma putrefaciens KS1]
Length = 208
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPH---T 70
F RRIR YA + ++ + D RY VA+H L + ++ ++ K+I + T
Sbjct: 34 FIRRIRVLSYAKKKVVVFKPGIDQRYSKHHVASHSGTMLDSYIVQNSSDIRKIIDNENLT 93
Query: 71 KDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
K +DV+GIDE QF D+V + +A+ G IV+V LD F+ F ++ L+ LAE V
Sbjct: 94 KIVDVVGIDEVQFLDEDIVELIDQLADQGIIVIVNGLDKDFRSKPFKNVDKLLALAEFVT 153
Query: 130 KLTAVCMSCFRDAAFTKRI 148
KL A C C A ++RI
Sbjct: 154 KLRARCHICGNFANRSQRI 172
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E+I G MF+GKT E IRRIR YA + ++ + D RY V++H L + +
Sbjct: 20 ELITGCMFAGKTEEFIRRIRVLSYAKKKVVVFKPGIDQRYSKHHVASHSGTMLDSYIVQN 79
Query: 210 AVELNKLIPH---TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ ++ K+I + TK +DV+GIDE QF++
Sbjct: 80 SSDIRKIIDNENLTKIVDVVGIDEVQFLD------------------------------- 108
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
D+V + +A+ G IV+V LD F+ F ++ L+ LAE V K
Sbjct: 109 --------------EDIVELIDQLADQGIIVIVNGLDKDFRSKPFKNVDKLLALAEFVTK 154
Query: 327 LTAVCMSCFRDAAFTKRI 344
L A C C A ++RI
Sbjct: 155 LRARCHICGNFANRSQRI 172
>gi|406672624|ref|ZP_11079849.1| hypothetical protein HMPREF9700_00391 [Bergeyella zoohelcum CCUG
30536]
gi|405587168|gb|EKB60896.1| hypothetical protein HMPREF9700_00391 [Bergeyella zoohelcum CCUG
30536]
Length = 198
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A I + D RY E V +H++ K+ + +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAEMAGQSVEIFKPKLDTRYSEEDVVSHNRNKIPSTAVET 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++++ + DV+GIDE QF +
Sbjct: 77 PDEILLLGSNCDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V A +AN+G VV+A LD F F + L+ AE V K+ A+C
Sbjct: 100 --------ESIVEVANQLANSGVRVVIAGLDMDFMGRPFGPMPFLMATAEYVTKVHAICK 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
A ++ R K++
Sbjct: 152 RTGNLANYSMRTSTSKDL 169
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV 75
RR+RR + A I + D RY E V +H++ K+ + + ++++ + DV
Sbjct: 30 ELIRRLRRAEMAGQSVEIFKPKLDTRYSEEDVVSHNRNKIPSTAVETPDEILLLGSNCDV 89
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF + +V A +AN+G VV+A LD F F + L+ AE V K+ A+
Sbjct: 90 VGIDEAQFFDESIVEVANQLANSGVRVVIAGLDMDFMGRPFGPMPFLMATAEYVTKVHAI 149
Query: 135 CMSCFRDAAFTKRIGQEKEVI 155
C A ++ R K+++
Sbjct: 150 CKRTGNLANYSMRTSTSKDLV 170
>gi|257126153|ref|YP_003164267.1| thymidine kinase [Leptotrichia buccalis C-1013-b]
gi|257050092|gb|ACV39276.1| Thymidine kinase [Leptotrichia buccalis C-1013-b]
Length = 359
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA--VSA 210
EV+ G MFSGK+ ELIRR+RR +YA + + ++A D+RY +H A VS
Sbjct: 11 EVVTGSMFSGKSEELIRRLRRAEYAKQKIVAFKHAIDNRYGENGAFSHGNNSFRAYPVSD 70
Query: 211 V-ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
V ++ +++ D +VIGIDE QF + +K
Sbjct: 71 VSQMEEIMAKNIDAEVIGIDEIQF-----------------FGEK--------------- 98
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
VV F + GK ++VA LD +F+ + + L+ +A+ V+KL A
Sbjct: 99 -------------VVDFCKKYVEYGKRIIVAGLDMSFRAEPYEPVPELMSIADQVDKLHA 145
Query: 330 VCMSCFRDAAFTKRI 344
+C C + A ++R+
Sbjct: 146 ICTVCGKPAYASQRL 160
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA--VSAV-ELNKLIPHTKDI 73
RR+RR +YA + + ++A D+RY +H A VS V ++ +++ D
Sbjct: 25 LIRRLRRAEYAKQKIVAFKHAIDNRYGENGAFSHGNNSFRAYPVSDVSQMEEIMAKNIDA 84
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+VIGIDE QFF + VV F + GK ++VA LD +F+ + + L+ +A+ V+KL
Sbjct: 85 EVIGIDEIQFFGEKVVDFCKKYVEYGKRIIVAGLDMSFRAEPYEPVPELMSIADQVDKLH 144
Query: 133 AVCMSCFRDAAFTKRI 148
A+C C + A ++R+
Sbjct: 145 AICTVCGKPAYASQRL 160
>gi|323342349|ref|ZP_08082581.1| thymidine kinase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|336066848|ref|YP_004561706.1| thymidine kinase [Erysipelothrix rhusiopathiae str. Fujisawa]
gi|322463461|gb|EFY08655.1| thymidine kinase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|334296794|dbj|BAK32665.1| thymidine kinase [Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 204
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI ++A+ ++ + A D+RY KV +H + +V +
Sbjct: 12 EVITGCMFAGKTEELIRRINVLKFAHKNIIVFKPAVDNRYSDSKVVSHAGTSVQSVVVDK 71
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + TK+ DV+ IDE QF +
Sbjct: 72 ATDILKYVTKETDVVAIDEVQFFD------------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + +A GK V+VA LD F+ F I L+ AE V KLTAVC
Sbjct: 96 ---------EEIVKVCDHLALEGKRVMVAGLDMDFRGEPFGVIPKLMTTAEFVTKLTAVC 146
Query: 332 MSCFRDAAFTKRI 344
C A T+R+
Sbjct: 147 TECGAPATRTQRL 159
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RRI ++A+ ++ + A D+RY KV +H + +V + ++ + TK+ DV+
Sbjct: 28 RRINVLKFAHKNIIVFKPAVDNRYSDSKVVSHAGTSVQSVVVDKATDILKYVTKETDVVA 87
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + +A GK V+VA LD F+ F I L+ AE V KLTAVC
Sbjct: 88 IDEVQFFDEEIVKVCDHLALEGKRVMVAGLDMDFRGEPFGVIPKLMTTAEFVTKLTAVCT 147
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 148 ECGAPATRTQRL 159
>gi|227485080|ref|ZP_03915396.1| possible thymidine kinase [Anaerococcus lactolyticus ATCC 51172]
gi|227236913|gb|EEI86928.1| possible thymidine kinase [Anaerococcus lactolyticus ATCC 51172]
Length = 207
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 46/204 (22%)
Query: 144 FTKRIGQEKEVIL--GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD 201
F K I ++ ++I+ G MFSGKTT L R + R ANY+ + + + D+R +K+ +HD
Sbjct: 2 FKKMIKRQGKLIVHTGSMFSGKTTSLWRELYRMTIANYKTVAFKPSVDNRDSDKKIVSHD 61
Query: 202 QQKLTAVSAVELNKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
L A+ LN+++ + K +ID IGIDE QF
Sbjct: 62 NLSLDAIKIENLNEILDYVKKHEIDAIGIDELQFF------------------------- 96
Query: 260 SPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 319
P E +VV + +V++ LD ++ F I ++P
Sbjct: 97 -----------------PNEPSEVVDIFNKLMAKNITIVISGLDMDYKAKPFEIIKEIMP 139
Query: 320 LAECVEKLTAVCMSCFRDAAFTKR 343
LA+ + K A+C SC DA + R
Sbjct: 140 LADELIKHHAICASCGEDAWASYR 163
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DID 74
R + R ANY+ + + + D+R +K+ +HD L A+ LN+++ + K +ID
Sbjct: 27 LWRELYRMTIANYKTVAFKPSVDNRDSDKKIVSHDNLSLDAIKIENLNEILDYVKKHEID 86
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
IGIDE QFFP+ VV + +V++ LD ++ F I ++PLA+ + K
Sbjct: 87 AIGIDELQFFPNEPSEVVDIFNKLMAKNITIVISGLDMDYKAKPFEIIKEIMPLADELIK 146
Query: 131 LTAVCMSCFRDAAFTKR 147
A+C SC DA + R
Sbjct: 147 HHAICASCGEDAWASYR 163
>gi|371945144|gb|AEX62965.1| thymidine kinase [Moumouvirus Monve]
Length = 206
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 89/154 (57%), Gaps = 13/154 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDT-----EKVATHDQQKLTAVSAV---EL--NKL 66
F R I R + A +C+I+++ +D+R++ + V TH++ K V +L N+
Sbjct: 18 FIRLIERKKLAGKQCLIIKHLQDNRFEEINSKEKHVITHNKIKYKNCDIVYNTDLMNNEF 77
Query: 67 IPHTK-DIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLA 125
+ + K DV+GI+EG FF ++ +F +AN V+V+ +D ++++ +I LI +
Sbjct: 78 LEYVKTSYDVVGIEEGFFFNNLTTFCNCLANENIEVIVSTIDSSYKQEIPQEIGKLIATS 137
Query: 126 ECVEKLTAVCMSCFR-DAAFTKR-IGQEKEVILG 157
E V KL AVCM C DA+FT R I E+++++G
Sbjct: 138 ENVIKLKAVCMECKNTDASFTIRTIDDEQDILVG 171
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 59/211 (27%)
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD-----TEKVSTHDQQKLTAVS 209
I+GPMFSGKTTE IR I R + A +C+I+++ +D+R++ + V TH++ K
Sbjct: 6 IIGPMFSGKTTEFIRLIERKKLAGKQCLIIKHLQDNRFEEINSKEKHVITHNKIKYKNCD 65
Query: 210 AV---EL--NKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
V +L N+ + + K DV+GI+EG F
Sbjct: 66 IVYNTDLMNNEFLEYVKTSYDVVGIEEGFF------------------------------ 95
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
F ++ +F +AN V+V+ +D ++++ +I LI +E
Sbjct: 96 ----------------FNNLTTFCNCLANENIEVIVSTIDSSYKQEIPQEIGKLIATSEN 139
Query: 324 VEKLTAVCMSCFR-DAAFTKR-IGQEKEVRI 352
V KL AVCM C DA+FT R I E+++ +
Sbjct: 140 VIKLKAVCMECKNTDASFTIRTIDDEQDILV 170
>gi|338210423|ref|YP_004654472.1| thymidine kinase [Runella slithyformis DSM 19594]
gi|336304238|gb|AEI47340.1| Thymidine kinase [Runella slithyformis DSM 19594]
Length = 195
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 46/197 (23%)
Query: 147 RIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLT 206
RIG EV+ G MFSGKT ELIRR+ R + A + I + A D RY + +H++ +
Sbjct: 15 RIGW-VEVVCGSMFSGKTEELIRRLNRAKIARQKVEIFKPAIDKRYHDVDIVSHNENSIR 73
Query: 207 AVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ +++ D DV+GIDE QF++
Sbjct: 74 STPVNTSEEILLFAGDCDVVGIDEAQFLD------------------------------- 102
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
++V +A +GK V+VA LD F F + L+ +AE V K
Sbjct: 103 --------------NNLVEVCNKLAGSGKRVIVAGLDMDFAGKPFGPMPLLLSIAEYVTK 148
Query: 327 LTAVCMSCFRDAAFTKR 343
+ AVC+ C A ++ R
Sbjct: 149 VHAVCVVCGEVAQYSYR 165
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R + A + I + A D RY + +H++ + + +++ D DV+GI
Sbjct: 36 RRLNRAKIARQKVEIFKPAIDKRYHDVDIVSHNENSIRSTPVNTSEEILLFAGDCDVVGI 95
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF + +V +A +GK V+VA LD F F + L+ +AE V K+ AVC+
Sbjct: 96 DEAQFLDNNLVEVCNKLAGSGKRVIVAGLDMDFAGKPFGPMPLLLSIAEYVTKVHAVCVV 155
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
C A ++ +++ + +++LG
Sbjct: 156 CGEVAQYSYRKVTSQDKILLG 176
>gi|223983555|ref|ZP_03633738.1| hypothetical protein HOLDEFILI_01019 [Holdemania filiformis DSM
12042]
gi|223964483|gb|EEF68812.1| hypothetical protein HOLDEFILI_01019 [Holdemania filiformis DSM
12042]
Length = 202
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI+ ++A + ++ + A D+RY KV +H ++ ++ E
Sbjct: 12 EVISGCMFAGKTEELIRRIKVLEFAKKKVLVFKPAIDNRYSETKVVSHAGSEVDSIVIRE 71
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + D +DVI IDE QF +
Sbjct: 72 AKEILNYVDDSVDVIAIDEVQFFD------------------------------------ 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ + A GK V+ A LD F+ F + LI AE V KLTAVC
Sbjct: 96 ---------EDIIEICDYYAKKGKRVMAAGLDMDFKGEPFGVMPILITKAEFVTKLTAVC 146
Query: 332 MSCFRDAAFTKRI 344
C A T+R+
Sbjct: 147 TICGAPATRTQRL 159
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRI+ ++A + ++ + A D+RY KV +H ++ ++ E +++ + D +DVI
Sbjct: 28 RRIKVLEFAKKKVLVFKPAIDNRYSETKVVSHAGSEVDSIVIREAKEILNYVDDSVDVIA 87
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D++ + A GK V+ A LD F+ F + LI AE V KLTAVC
Sbjct: 88 IDEVQFFDEDIIEICDYYAKKGKRVMAAGLDMDFKGEPFGVMPILITKAEFVTKLTAVCT 147
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 148 ICGAPATRTQRL 159
>gi|402297822|ref|ZP_10817568.1| thymidine kinase [Bacillus alcalophilus ATCC 27647]
gi|401726959|gb|EJT00164.1| thymidine kinase [Bacillus alcalophilus ATCC 27647]
Length = 203
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+R + + + + D+RY ++V +H+ ++ A+ +
Sbjct: 9 EVICGSMFSGKSEELIRRVRLVTFGKIKVQVFKPKIDNRYSDDEVVSHNGTRVVAMPISK 68
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+I + D+ V+ IDE QF + ++ + VC++
Sbjct: 69 SVDIIEEIEADVKVVAIDEIQFFD-----EQIIQVCQQ---------------------- 101
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+ A LD F+ F I L+ LAE V KL AVC
Sbjct: 102 ------------------LANQGIRVICAGLDQDFRGEPFGPIQPLLALAEEVTKLQAVC 143
Query: 332 MSCFRDAAFTKRI 344
SC A+ T+R+
Sbjct: 144 ASCGAPASRTQRL 156
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RR+R + + + + D+RY ++V +H+ ++ A+ + +I + D+ V+
Sbjct: 25 RRVRLVTFGKIKVQVFKPKIDNRYSDDEVVSHNGTRVVAMPISKSVDIIEEIEADVKVVA 84
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + ++ + +AN G V+ A LD F+ F I L+ LAE V KL AVC
Sbjct: 85 IDEIQFFDEQIIQVCQQLANQGIRVICAGLDQDFRGEPFGPIQPLLALAEEVTKLQAVCA 144
Query: 137 SCFRDAAFTKRI 148
SC A+ T+R+
Sbjct: 145 SCGAPASRTQRL 156
>gi|359416779|ref|ZP_09209053.1| thymidine kinase [Candidatus Haloredivivus sp. G17]
gi|358032867|gb|EHK01498.1| thymidine kinase [Candidatus Haloredivivus sp. G17]
Length = 191
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 48/192 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT+EL+ R++R + + + + + + DDRY ++ +H+ + A +
Sbjct: 14 EVITGCMFSGKTSELLERVKRAELSGHDVKLYKPSVDDRYGETEIGSHNGETRKAEVIED 73
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++++ P + VIGIDE F + +K K
Sbjct: 74 ISEIRPESY---VIGIDEANF-----------------FDEKLTDK-------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
AE +A+ G V+++ LD TF+ F + L+ AE ++KL AVC+
Sbjct: 100 --------------AEELADEGHRVIISGLDSTFRAEPFEPVPELMSKAEFIDKLNAVCV 145
Query: 333 SCFRDAAFTKRI 344
C A T+RI
Sbjct: 146 KCGSTANRTQRI 157
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 4/130 (3%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGID 79
R++R + + + + + + DDRY ++ +H+ + A +++++ P + VIGID
Sbjct: 31 RVKRAELSGHDVKLYKPSVDDRYGETEIGSHNGETRKAEVIEDISEIRPESY---VIGID 87
Query: 80 EGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
E FF + + AE +A+ G V+++ LD TF+ F + L+ AE ++KL AVC+ C
Sbjct: 88 EANFFDEKLTDKAEELADEGHRVIISGLDSTFRAEPFEPVPELMSKAEFIDKLNAVCVKC 147
Query: 139 FRDAAFTKRI 148
A T+RI
Sbjct: 148 GSTANRTQRI 157
>gi|296331345|ref|ZP_06873817.1| thymidine kinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676331|ref|YP_003868003.1| thymidine kinase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296151460|gb|EFG92337.1| thymidine kinase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414575|gb|ADM39694.1| thymidine kinase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 195
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D+RY + V +H+ +T+ S
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMTSYSISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DVI +DE QF +
Sbjct: 71 AADIWDHISESTDVIAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+++ S+A+ G V+ A LD F+ F + S++ +AE V KL AVC
Sbjct: 95 ---------EEIIEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPSIMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + D+RY + V +H+ +T+ S + H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMTSYSISSAADIWDHISESTDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF +++ S+A+ G V+ A LD F+ F + S++ +AE V KL AV
Sbjct: 85 IAVDEVQFFDEEIIEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPSIMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|56421915|ref|YP_149233.1| thymidine kinase [Geobacillus kaustophilus HTA426]
gi|73920100|sp|Q5KUH1.1|KITH_GEOKA RecName: Full=Thymidine kinase
gi|56381757|dbj|BAD77665.1| thymidine kinase [Geobacillus kaustophilus HTA426]
gi|345433318|dbj|BAK69316.1| thymidine kinase [Geobacillus kaustophilus]
Length = 207
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E+I G MFSGK+ ELIRR+RR Q+A + + D+RY + V +H+ + A+ +
Sbjct: 11 ELICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ + I + DV+ IDE QF SD
Sbjct: 71 PAEMFRYI--SAATDVVAIDEIQFF-----SD---------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL A
Sbjct: 96 ------------DIIDVVQTLADCGYRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q+A + + D+RY + V +H+ + A+ + E+ + I + DV
Sbjct: 27 RRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVATPAEMFRYI--SAATDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D ++ +++A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEIQFFSDDIIDVVQTLADCGYRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|381187076|ref|ZP_09894641.1| thymidine kinase [Flavobacterium frigoris PS1]
gi|379650686|gb|EIA09256.1| thymidine kinase [Flavobacterium frigoris PS1]
Length = 197
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R Q+A + I + A D RY + V +HD ++ + +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPAIDTRYHDDMVVSHDANEIRSTAVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ + +C +
Sbjct: 77 AANIAILAQGCDVVGIDEAQFFD-----DEIVKICND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 109 -----------------LANQGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A + I + A D RY + V +HD ++ + + + + DV+GI
Sbjct: 33 RRLKRAQFAKQKVEIFKPAIDTRYHDDMVVSHDANEIRSTAVPAAANIAILAQGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVKICNDLANQGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ ++ +K V+LG
Sbjct: 153 TGNLANYSFRKTDSDKLVMLG 173
>gi|255070469|ref|XP_002507316.1| predicted protein [Micromonas sp. RCC299]
gi|226522591|gb|ACO68574.1| predicted protein [Micromonas sp. RCC299]
Length = 221
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 93/218 (42%), Gaps = 60/218 (27%)
Query: 128 VEKLTAVCMS----CFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMI 183
V KL+ C+ F + T+R E +I+GPMFSGK+T LI+R++ + A + +
Sbjct: 9 VAKLSQCCLKKSKRSFPGLSSTRR--GEIHMIIGPMFSGKSTALIQRVKEDEAAGLQAQM 66
Query: 184 VRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP------HTKDIDVIGIDEGQFVEVI 237
V ++D RY + +V +H +E IP H +DV+ IDE QF
Sbjct: 67 VNSSRDVRYSSFEVVSHGGAT-RPCHCIEKLWDIPILLGFEHFSRVDVLAIDEAQF---- 121
Query: 238 GGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMA-NAGKI 296
FPD+ SF S A + K
Sbjct: 122 ------------------------------------------FPDLASFCISAAEDHHKK 139
Query: 297 VVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
V+VA L G F+R F I LIP+A+ V KLT+ C C
Sbjct: 140 VIVAGLSGDFRRKRFGQISDLIPIADSVLKLTSNCAMC 177
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 12/151 (7%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIP------HTKD 72
+R++ + A + +V ++D RY + +V +H +E IP H
Sbjct: 52 QRVKEDEAAGLQAQMVNSSRDVRYSSFEVVSHGGAT-RPCHCIEKLWDIPILLGFEHFSR 110
Query: 73 IDVIGIDEGQFFPDVVSFAESMA-NAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+DV+ IDE QFFPD+ SF S A + K V+VA L G F+R F I LIP+A+ V KL
Sbjct: 111 VDVLAIDEAQFFPDLASFCISAAEDHHKKVIVAGLSGDFRRKRFGQISDLIPIADSVLKL 170
Query: 132 TAVCMSC-FRDAAFTKRI---GQEKEVILGP 158
T+ C C F+ R + +E+I GP
Sbjct: 171 TSNCAMCDMTSGLFSLRTTSNWENQELIGGP 201
>gi|433652580|ref|YP_007296434.1| thymidine kinase [Prevotella dentalis DSM 3688]
gi|433303113|gb|AGB28928.1| thymidine kinase [Prevotella dentalis DSM 3688]
Length = 207
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R Q+A I + A D RY V +HD + +
Sbjct: 16 EVVCGSMFSGKTEELIRRLKRAQFARQNVEIFKPALDTRYSEINVVSHDNNAIHSTPVDN 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + +V+GIDE QF++ DK + VC
Sbjct: 76 AETILRLSAGHEVVGIDEAQFLD-----DKLVEVCN------------------------ 106
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+MAN G V+VA LD + F I +L +A+ V K+ A+C+
Sbjct: 107 ----------------AMANKGIRVIVAGLDMDYLGVPFGPIPALCAVADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 KCGALAYASHRL 162
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A I + A D RY V +HD + + ++ + +V+GI
Sbjct: 32 RRLKRAQFARQNVEIFKPALDTRYSEINVVSHDNNAIHSTPVDNAETILRLSAGHEVVGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF D +V +MAN G V+VA LD + F I +L +A+ V K+ A+C+
Sbjct: 92 DEAQFLDDKLVEVCNAMANKGIRVIVAGLDMDYLGVPFGPIPALCAVADEVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + + +V+LG
Sbjct: 152 CGALAYASHRLVHNDAQVMLG 172
>gi|206895840|ref|YP_002247172.1| thymidine kinase [Coprothermobacter proteolyticus DSM 5265]
gi|238056553|sp|B5Y8S5.1|KITH_COPPD RecName: Full=Thymidine kinase
gi|206738457|gb|ACI17535.1| thymidine kinase [Coprothermobacter proteolyticus DSM 5265]
Length = 198
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR A + ++ A D RYD V +H A+ +
Sbjct: 11 EVITGCMFSGKTEELVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVED 70
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ KD +V+GIDE QF + + + V RE + K
Sbjct: 71 PKSILGMAKDAEVVGIDEAQFF-----TGELVPVIRELLQNK------------------ 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
K V+VA LD F+ F + +L+ LA+ V KL A+C
Sbjct: 108 ----------------------KRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAICS 145
Query: 333 SCFRDAAFTKRI 344
C A T+R+
Sbjct: 146 VCGNIATKTQRL 157
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR+RR A + ++ A D RYD V +H A+ + ++ KD +V+
Sbjct: 25 LVRRLRRAVIAKKETIAIKPALDTRYDLVAVVSHSGFSFNAIPVEDPKSILGMAKDAEVV 84
Query: 77 GIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF ++V + K V+VA LD F+ F + +L+ LA+ V KL A+C
Sbjct: 85 GIDEAQFFTGELVPVIRELLQNKKRVIVAGLDLDFRGEPFGIMPTLLALADEVTKLHAIC 144
Query: 136 MSCFRDAAFTKRI 148
C A T+R+
Sbjct: 145 SVCGNIATKTQRL 157
>gi|365122767|ref|ZP_09339665.1| thymidine kinase [Tannerella sp. 6_1_58FAA_CT1]
gi|363641752|gb|EHL81129.1| thymidine kinase [Tannerella sp. 6_1_58FAA_CT1]
Length = 194
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R + A + I + + D RY E++ +HD + +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKIARQKVEIFKPSIDIRYSEEEIVSHDSNSIQSTPVDS 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + +DV+GIDE QF +
Sbjct: 77 SASILLLSSGVDVVGIDEAQFFD------------------------------------- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +A+ G V+VA LD F++ F + L+ +A+ V K+ A+C+
Sbjct: 100 --------QGIVDICNQLADQGTRVIVAGLDMDFKKVPFGPMPYLLSIADEVTKVHAICV 151
Query: 333 SCFRDAAFTKRI 344
C A ++ R+
Sbjct: 152 ECGHLANYSHRL 163
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R + A + I + + D RY E++ +HD + + ++ + +DV+GI
Sbjct: 33 RRLKRAKIARQKVEIFKPSIDIRYSEEEIVSHDSNSIQSTPVDSSASILLLSSGVDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V +A+ G V+VA LD F++ F + L+ +A+ V K+ A+C+
Sbjct: 93 DEAQFFDQGIVDICNQLADQGTRVIVAGLDMDFKKVPFGPMPYLLSIADEVTKVHAICVE 152
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A ++ R I +K V+LG
Sbjct: 153 CGHLANYSHRLIDNDKRVLLG 173
>gi|375010562|ref|YP_004984195.1| thymidine kinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448239659|ref|YP_007403717.1| thymidine kinase [Geobacillus sp. GHH01]
gi|345433312|dbj|BAK69313.1| thymidine kinase [Bacillus caldotenax]
gi|345433320|dbj|BAK69317.1| thymidine kinase [Geobacillus zalihae]
gi|359289411|gb|AEV21095.1| Thymidine kinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445208501|gb|AGE23966.1| thymidine kinase [Geobacillus sp. GHH01]
Length = 207
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E+I G MFSGK+ ELIRR+RR Q+A + + D+RY + V +H+ + A+ +
Sbjct: 11 ELICGCMFSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ + I + DV+ IDE QF SD
Sbjct: 71 PAEMFRYI--SAATDVVAIDEIQFF-----SD---------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL A
Sbjct: 96 ------------DIIDVVQTLADCGYRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q+A + + D+RY + V +H+ + A+ + E+ + I + DV
Sbjct: 27 RRVRRAQFAKQEVKVFKPTIDNRYSEDAVVSHNGNSVIAIPVATPAEMFRYI--SAATDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D ++ +++A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEIQFFSDDIIDVVQTLADCGYRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|319952866|ref|YP_004164133.1| thymidine kinase [Cellulophaga algicola DSM 14237]
gi|319421526|gb|ADV48635.1| Thymidine kinase [Cellulophaga algicola DSM 14237]
Length = 213
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 14/189 (7%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R Q+A + I + D RY E V +HD ++ T V A +L+
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPQVDTRYHEEMVVSHDANQIRSTPVPAAANIRLL--ADGC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+
Sbjct: 88 DVVGIDEAQFFDDEIVAVCNDLANRGIRVLVAGLDMDFKGNPFGPMPALMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFT-KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR 191
A+C A ++ ++ +K V+LG TE + R Y Y+ M+ KD
Sbjct: 148 AICTRTGNLANYSFRKSTNDKLVLLG------ETEAYEPLSRAAY--YKAMLREKIKDID 199
Query: 192 YDTEKVSTH 200
+ E+V +
Sbjct: 200 IEAEQVKNN 208
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 86/193 (44%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + D RY E V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPQVDTRYHEEMVVSHDANQIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ DV+GIDE QF + D+ +AVC +
Sbjct: 77 AANIRLL--ADGCDVVGIDEAQFFD-----DEIVAVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ A+
Sbjct: 109 -------------------LANRGIRVLVAGLDMDFKGNPFGPMPALMATAEYVTKVHAI 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLANYSFR 162
>gi|340347704|ref|ZP_08670809.1| thymidine kinase [Prevotella dentalis DSM 3688]
gi|339608898|gb|EGQ13781.1| thymidine kinase [Prevotella dentalis DSM 3688]
Length = 223
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R Q+A I + A D RY V +HD + +
Sbjct: 32 EVVCGSMFSGKTEELIRRLKRAQFARQNVEIFKPALDTRYSEINVVSHDNNAIHSTPVDN 91
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + +V+GIDE QF++ DK + VC
Sbjct: 92 AETILRLSAGHEVVGIDEAQFLD-----DKLVEVC------------------------- 121
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+MAN G V+VA LD + F I +L +A+ V K+ A+C+
Sbjct: 122 ---------------NAMANKGIRVIVAGLDMDYLGVPFGPIPALCAVADEVTKVHAICV 166
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 167 KCGALAYASHRL 178
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q+A I + A D RY V +HD + + ++ + +V+GI
Sbjct: 48 RRLKRAQFARQNVEIFKPALDTRYSEINVVSHDNNAIHSTPVDNAETILRLSAGHEVVGI 107
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QF D +V +MAN G V+VA LD + F I +L +A+ V K+ A+C+
Sbjct: 108 DEAQFLDDKLVEVCNAMANKGIRVIVAGLDMDYLGVPFGPIPALCAVADEVTKVHAICVK 167
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + + +V+LG
Sbjct: 168 CGALAYASHRLVHNDAQVMLG 188
>gi|261880586|ref|ZP_06007013.1| thymidine kinase [Prevotella bergensis DSM 17361]
gi|270332705|gb|EFA43491.1| thymidine kinase [Prevotella bergensis DSM 17361]
Length = 209
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R ++A + I + A D RY V +HD+ + +
Sbjct: 16 EVVCGSMFSGKTEELIRRMKRAKFARQKVEIFKPALDTRYSDVNVVSHDRNVIHSTPVEN 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ DVIGIDE QF + K + VC
Sbjct: 76 AEEILTRYAGHDVIGIDEAQFFD-----SKLVDVC------------------------- 105
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+M+N G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 106 ---------------NTMSNKGVRVIVAGLDMDFRGNPFGSIPALCAVADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 RCGALAYASHRL 162
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY V +HD+ + + +++ DVIGI
Sbjct: 32 RRMKRAKFARQKVEIFKPALDTRYSDVNVVSHDRNVIHSTPVENAEEILTRYAGHDVIGI 91
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V +M+N G V+VA LD F+ F I +L +A+ V K+ A+C+
Sbjct: 92 DEAQFFDSKLVDVCNTMSNKGVRVIVAGLDMDFRGNPFGSIPALCAVADEVTKVHAICVR 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + E +V+LG
Sbjct: 152 CGALAYASHRLVNVESQVMLG 172
>gi|241889981|ref|ZP_04777279.1| thymidine kinase [Gemella haemolysans ATCC 10379]
gi|241863603|gb|EER67987.1| thymidine kinase [Gemella haemolysans ATCC 10379]
Length = 192
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ EL+RRI+R A ++ + + D+RY+ KVSTH+ +V+ +
Sbjct: 11 ECICGSMFSGKSEELLRRIKRGVIAKQNVLLFKPSIDNRYEENKVSTHNGNSYESVNIDK 70
Query: 213 LNKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
++ + D D+IGIDE QF + DK
Sbjct: 71 AEQIYDYINDKKYDIIGIDEVQFFD-----DK---------------------------- 97
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+V +A+ G V+VA LD F+ F+ + ++ ++E V KL AV
Sbjct: 98 ------------IVEVINKLADDGVRVIVAGLDMDFKAEPFHPMPEIMAISEMVTKLHAV 145
Query: 331 CMSCFRDAAFTKRI 344
C C ++A+ ++R+
Sbjct: 146 CNKCGKEASRSQRL 159
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--IDVI 76
RRI+R A ++ + + D+RY+ KV+TH+ +V+ + ++ + D D+I
Sbjct: 27 RRIKRGVIAKQNVLLFKPSIDNRYEENKVSTHNGNSYESVNIDKAEQIYDYINDKKYDII 86
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF D +V +A+ G V+VA LD F+ F+ + ++ ++E V KL AVC
Sbjct: 87 GIDEVQFFDDKIVEVINKLADDGVRVIVAGLDMDFKAEPFHPMPEIMAISEMVTKLHAVC 146
Query: 136 MSCFRDAAFTKRI 148
C ++A+ ++R+
Sbjct: 147 NKCGKEASRSQRL 159
>gi|363582487|ref|ZP_09315297.1| thymidine kinase [Flavobacteriaceae bacterium HQM9]
Length = 192
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 85/193 (44%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + D RY E V +HD ++ T V A
Sbjct: 17 EVISGSMFSGKTEELIRRLKRAQFAKQKVEIFKPMVDTRYSEENVVSHDNNEIASTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+++ T DV+GIDE QF + + + VC +
Sbjct: 77 AANIRILADT--CDVVGIDEAQFFD-----EGIVRVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANKGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CAKTGNLAHYSHR 162
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDIDVI 76
RR++R Q+A + I + D RY E V +HD ++ T V A +++ T DV+
Sbjct: 33 RRLKRAQFAKQKVEIFKPMVDTRYSEENVVSHDNNEIASTPVPAAANIRILADT--CDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +V +AN G V+VA LD F+ F + +L+ AE V K+ AVC
Sbjct: 91 GIDEAQFFDEGIVRVCNDLANKGIRVIVAGLDMDFKGNPFGPMPALMATAEYVTKVHAVC 150
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
A ++ R ++ +++
Sbjct: 151 AKTGNLAHYSHRKSTDENLVM 171
>gi|412992362|emb|CCO20075.1| thymidine kinase [Bathycoccus prasinos]
Length = 310
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 59/207 (28%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYA-NYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSA 210
+ILGPMF+GKTT L+ R+++ + + + ++++ KD RY +KV THD ++ V +
Sbjct: 132 LILGPMFAGKTTRLLERVKQLEESVSANVLLLKSDKDTRYAKDKVVTHDGRGRECFPVKS 191
Query: 211 VELNKLIP-----HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+EL ++ + DV+ +DE QF+ CR
Sbjct: 192 LELEVVVKTVGERKWNECDVVAVDEAQFL------TNLYEFCR---------------VA 230
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
A+E+ KIV+VA L+G F+R F ++ +PL + V
Sbjct: 231 ADEH------------------------NKIVLVAGLNGDFKRETFGEVQETLPLCDSVT 266
Query: 326 KLTAVCMSCFRDAAFTKRI-----GQE 347
KLTA C C R A F+KRI GQE
Sbjct: 267 KLTAKC-KCGRPALFSKRIVNVGDGQE 292
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
Query: 32 MIVRYAKDDRYDTEKVATHDQQ--KLTAVSAVELNKLIP-----HTKDIDVIGIDEGQFF 84
++++ KD RY +KV THD + + V ++EL ++ + DV+ +DE QF
Sbjct: 161 LLLKSDKDTRYAKDKVVTHDGRGRECFPVKSLELEVVVKTVGERKWNECDVVAVDEAQFL 220
Query: 85 PDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAA 143
++ F A+ KIV+VA L+G F+R F ++ +PL + V KLTA C C R A
Sbjct: 221 TNLYEFCRVAADEHNKIVLVAGLNGDFKRETFGEVQETLPLCDSVTKLTAKC-KCGRPAL 279
Query: 144 FTKRI---GQEKEVILG 157
F+KRI G +E++ G
Sbjct: 280 FSKRIVNVGDGQELVGG 296
>gi|344202570|ref|YP_004787713.1| thymidine kinase [Muricauda ruestringensis DSM 13258]
gi|343954492|gb|AEM70291.1| Thymidine kinase [Muricauda ruestringensis DSM 13258]
Length = 214
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 86/193 (44%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + D RY E V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPIVDRRYHEEMVVSHDSNEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ D +V+GIDE QF + D+ + VC +
Sbjct: 77 AANIRLL--ADDCEVVGIDEAQFFD-----DEIVTVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G VVVA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANRGVRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLANYSFR 162
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R Q+A + I + D RY E V +HD ++ T V A +L+ D
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPIVDRRYHEEMVVSHDSNEIRSTPVPAAANIRLL--ADDC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+V+GIDE QFF D +V+ +AN G VVVA LD F+ F + +L+ AE V K+
Sbjct: 88 EVVGIDEAQFFDDEIVTVCNDLANRGVRVVVAGLDMDFKGNPFGPMPALMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFTKRIG-QEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR 191
AVC A ++ R + V+LG TE + R + Y+ M+ K+
Sbjct: 148 AVCTRTGNLANYSFRKSLNDNLVLLG------ETEEYEPLSRAAF--YKAMLREKIKEMD 199
Query: 192 YDTEKVSTHDQQ 203
++E+V T ++
Sbjct: 200 VESEEVGTKKKK 211
>gi|313665079|ref|YP_004046950.1| thymidine kinase [Mycoplasma leachii PG50]
gi|392388903|ref|YP_005907312.1| thymidine kinase [Mycoplasma leachii 99/014/6]
gi|312949226|gb|ADR23822.1| thymidine kinase [Mycoplasma leachii PG50]
gi|339276548|emb|CBV67127.1| Thymidine kinase [Mycoplasma leachii 99/014/6]
Length = 209
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIP---H 69
F RR++ YA R + + + D+RY E + +H KL + S+ E+ +++
Sbjct: 34 EFIRRLKVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVKSSDEIKQIVEKENQ 93
Query: 70 TKDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ +DVIGIDE QFF +VV E +A+ G IV+V LD F+ F ++ L+ AE V
Sbjct: 94 IQQVDVIGIDEVQFFDENVVDIVEQLADNGIIVIVNGLDKDFRGLPFKNVDKLLVKAEFV 153
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
KL A C C A ++RI
Sbjct: 154 TKLRARCHLCGSFANRSQRI 173
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E+I G MF+GKT E IRR++ YA R + + + D+RY E + +H KL + S
Sbjct: 21 ELITGCMFAGKTEEFIRRLKVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVKS 80
Query: 210 AVELNKLIP---HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ E+ +++ + +DVIGIDE QF +
Sbjct: 81 SDEIKQIVEKENQIQQVDVIGIDEVQFFD------------------------------- 109
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+VV E +A+ G IV+V LD F+ F ++ L+ AE V K
Sbjct: 110 --------------ENVVDIVEQLADNGIIVIVNGLDKDFRGLPFKNVDKLLVKAEFVTK 155
Query: 327 LTAVCMSCFRDAAFTKRI 344
L A C C A ++RI
Sbjct: 156 LRARCHLCGSFANRSQRI 173
>gi|159469903|ref|XP_001693099.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277357|gb|EDP03125.1| predicted protein [Chlamydomonas reinhardtii]
Length = 195
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 77/187 (41%), Gaps = 50/187 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I+GPMF+GKTT LI+R+R + A R ++V+ A D RY + V THD + V
Sbjct: 15 HLIVGPMFAGKTTRLIQRVREAEAAGRRTVVVKSAVDTRYAVDAVVTHDGVRAPCVPLSR 74
Query: 213 LNKLIPHTKDID-----VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
L L + + V+ IDE QF+ + RE Q
Sbjct: 75 LGDLRAALGEAEYAATQVVAIDEAQFIGDL----------REAVLQATEAD--------- 115
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
GK V VA L G F+R F I L+PLA+ VEKL
Sbjct: 116 --------------------------GKTVYVAGLSGDFRRDNFGQISQLLPLADNVEKL 149
Query: 328 TAVCMSC 334
+ C C
Sbjct: 150 SGRCTFC 156
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 13/154 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDID-- 74
+R+R + A R ++V+ A D RY + V THD + V L L + +
Sbjct: 29 LIQRVREAEAAGRRTVVVKSAVDTRYAVDAVVTHDGVRAPCVPLSRLGDLRAALGEAEYA 88
Query: 75 ---VIGIDEGQFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
V+ IDE QF D+ A GK V VA L G F+R F I L+PLA+ VEK
Sbjct: 89 ATQVVAIDEAQFIGDLREAVLQATEADGKTVYVAGLSGDFRRDNFGQISQLLPLADNVEK 148
Query: 131 LTAVCMSCFRD-----AAFTKRIG--QEKEVILG 157
L+ C C + + FT RI ++E++ G
Sbjct: 149 LSGRCTFCEQQGRRSASHFTLRIAASTQQELVGG 182
>gi|403383674|ref|ZP_10925731.1| thymidine kinase [Kurthia sp. JC30]
Length = 200
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR Q+A + + + D+RY E V +H+ + A +
Sbjct: 11 EVICGSMFSGKSEELIRRVRRAQFAKQKIAVFKPKLDNRYSEEAVVSHNGTTVIAHPIEK 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + D D+I IDE QF
Sbjct: 71 TEEMWNYIDDEYDLIAIDEAQFFG------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D++ + +A+ G V++A LD F+ F + L+ +AE V KL AVC
Sbjct: 95 ---------EDIIDTVQKLADHGFRVILAGLDQDFKGVPFGPMPFLMAIAEQVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR+RR Q+A + + + D+RY E V +H+ + A + ++ + D D+I
Sbjct: 27 RRVRRAQFAKQKIAVFKPKLDNRYSEEAVVSHNGTTVIAHPIEKTEEMWNYIDDEYDLIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D++ + +A+ G V++A LD F+ F + L+ +AE V KL AVC
Sbjct: 87 IDEAQFFGEDIIDTVQKLADHGFRVILAGLDQDFKGVPFGPMPFLMAIAEQVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|163847863|ref|YP_001635907.1| thymidine kinase [Chloroflexus aurantiacus J-10-fl]
gi|222525736|ref|YP_002570207.1| thymidine kinase [Chloroflexus sp. Y-400-fl]
gi|189028750|sp|A9WGI6.1|KITH_CHLAA RecName: Full=Thymidine kinase
gi|254807841|sp|B9LJ65.1|KITH_CHLSY RecName: Full=Thymidine kinase
gi|163669152|gb|ABY35518.1| Thymidine kinase [Chloroflexus aurantiacus J-10-fl]
gi|222449615|gb|ACM53881.1| Thymidine kinase [Chloroflexus sp. Y-400-fl]
Length = 193
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI G M+SGKT ELIRR+R+ + A I D RY +V++H +L A+
Sbjct: 7 GGRIEVICGCMYSGKTEELIRRMRQVRIARQSYRIFTPRMDTRYAEGQVASHSGSRLEAI 66
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ + ++ H +D V+ IDE + D + R C
Sbjct: 67 TVATMKDILAHAEDAQVVAIDELHLFD-----DDPAEMVRGC------------------ 103
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
+ +AN G V+VA LD ++ F ++ L+ LAE V+KL
Sbjct: 104 -------------------QWLANRGVRVIVAGLDLNYRAEPFPAMMHLLALAEQVDKLY 144
Query: 329 AVCMSCFRDAAFTKRI 344
A+C+ C A ++R+
Sbjct: 145 AICVKCGAYATRSQRL 160
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+R+ + A I D RY +VA+H +L A++ + ++ H +D V+ I
Sbjct: 27 RRMRQVRIARQSYRIFTPRMDTRYAEGQVASHSGSRLEAITVATMKDILAHAEDAQVVAI 86
Query: 79 DEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
DE F D +V + +AN G V+VA LD ++ F ++ L+ LAE V+KL A+
Sbjct: 87 DELHLFDDDPAEMVRGCQWLANRGVRVIVAGLDLNYRAEPFPAMMHLLALAEQVDKLYAI 146
Query: 135 CMSCFRDAAFTKRI 148
C+ C A ++R+
Sbjct: 147 CVKCGAYATRSQRL 160
>gi|433450162|ref|ZP_20412523.1| thymidine kinase [Mycoplasma sp. G5847]
gi|431933974|gb|ELK20528.1| thymidine kinase [Mycoplasma sp. G5847]
Length = 209
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 52/210 (24%)
Query: 141 DAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTH 200
+A TK++G E+I G MF+GKT E IRR+R YA + + + + D+RY E +++H
Sbjct: 10 EAYNTKKMGW-IELITGCMFAGKTEEFIRRLRVLSYAKKKVLAFKPSIDNRYSVENITSH 68
Query: 201 DQQKLTAV---SAVELNKLI---PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQK 254
KL + S+ E+ +++ + +DVIGIDE QF +
Sbjct: 69 SGSKLDSYLVKSSDEIKQIVNKENQIQQVDVIGIDEVQFFD------------------- 109
Query: 255 APIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDI 314
+VV E +A+ G IV+V LD F+ F ++
Sbjct: 110 --------------------------ENVVDVIEELADQGIIVIVNGLDKDFRGLPFKNV 143
Query: 315 LSLIPLAECVEKLTAVCMSCFRDAAFTKRI 344
L+ AE V KL A C C A ++RI
Sbjct: 144 DKLLVKAEFVTKLRARCHLCGSFANRSQRI 173
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLI---PH 69
F RR+R YA + + + + D+RY E + +H KL + S+ E+ +++
Sbjct: 34 EFIRRLRVLSYAKKKVLAFKPSIDNRYSVENITSHSGSKLDSYLVKSSDEIKQIVNKENQ 93
Query: 70 TKDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ +DVIGIDE QFF +VV E +A+ G IV+V LD F+ F ++ L+ AE V
Sbjct: 94 IQQVDVIGIDEVQFFDENVVDVIEELADQGIIVIVNGLDKDFRGLPFKNVDKLLVKAEFV 153
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
KL A C C A ++RI
Sbjct: 154 TKLRARCHLCGSFANRSQRI 173
>gi|171185643|ref|YP_001794562.1| thymidine kinase [Pyrobaculum neutrophilum V24Sta]
gi|170934855|gb|ACB40116.1| Thymidine kinase [Pyrobaculum neutrophilum V24Sta]
Length = 184
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 50/194 (25%)
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE-- 212
I+GPMF+GKTTELIRR+ RY A R ++ + + D RYD V+ H+ KL AV
Sbjct: 5 IVGPMFAGKTTELIRRVERYVIAGRRAVVFKPSIDARYDPASVAAHNGLKLNAVVVPPDE 64
Query: 213 --LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ + + DV+ +DE QF
Sbjct: 65 GGVKAIYKLGQRYDVVAVDEVQFF------------------------------------ 88
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
PP DV++ +A+ G++V+ A L+ F+ F L+ A+ V LTAV
Sbjct: 89 ------PPALADVLN---KLAD-GRVVIAAGLNLDFRGEPFETTARLMAYADRVISLTAV 138
Query: 331 CMSCFRDAAFTKRI 344
C C R A T+R+
Sbjct: 139 CKICGRPATRTQRL 152
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE----LNKLIPHTKD 72
RR+ RY A R ++ + + D RYD VA H+ KL AV + + +
Sbjct: 17 LIRRVERYVIAGRRAVVFKPSIDARYDPASVAAHNGLKLNAVVVPPDEGGVKAIYKLGQR 76
Query: 73 IDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ +DE QFFP ++ + G++V+ A L+ F+ F L+ A+ V LT
Sbjct: 77 YDVVAVDEVQFFPPALADVLNKLADGRVVIAAGLNLDFRGEPFETTARLMAYADRVISLT 136
Query: 133 AVCMSCFRDAAFTKRI 148
AVC C R A T+R+
Sbjct: 137 AVCKICGRPATRTQRL 152
>gi|325300190|ref|YP_004260107.1| thymidine kinase [Bacteroides salanitronis DSM 18170]
gi|324319743|gb|ADY37634.1| Thymidine kinase [Bacteroides salanitronis DSM 18170]
Length = 201
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R +A R I + D RY V +HD + +
Sbjct: 19 EVICGSMFSGKTEELIRRLKRASFARQRVEIFKPVLDTRYSESDVVSHDNNSIPSTPVDT 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + +IDV+GIDE QF + + VC E
Sbjct: 79 SASILLLSSEIDVVGIDEAQFFD-----EGLTDVCNE----------------------- 110
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V++A LD ++ F I L +A+ V K+ A+C+
Sbjct: 111 -----------------LANHGVRVIIAGLDMDYKGVPFGPIPGLCAIADEVTKVHAICV 153
Query: 333 SCFRDAAFTKR 343
C A + R
Sbjct: 154 KCGDLAYISHR 164
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R +A R I + D RY V +HD + + ++ + +IDV+GI
Sbjct: 35 RRLKRASFARQRVEIFKPVLDTRYSESDVVSHDNNSIPSTPVDTSASILLLSSEIDVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + + +AN G V++A LD ++ F I L +A+ V K+ A+C+
Sbjct: 95 DEAQFFDEGLTDVCNELANHGVRVIIAGLDMDYKGVPFGPIPGLCAIADEVTKVHAICVK 154
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + +K V+LG
Sbjct: 155 CGDLAYISHRTVADDKRVLLG 175
>gi|443631138|ref|ZP_21115319.1| thymidine kinase [Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443348943|gb|ELS62999.1| thymidine kinase [Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 195
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D+RY + V +H+ +T+ +
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMTSYAISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DVI +DE QF +
Sbjct: 71 AADIWDHISESTDVIAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V S+A+ G V+ A LD F+ F + ++ +AE V KL AVC
Sbjct: 95 ---------QDIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPDIMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + D+RY + V +H+ +T+ + + H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMTSYAISSAADIWDHISESTDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF D+V S+A+ G V+ A LD F+ F + ++ +AE V KL AV
Sbjct: 85 IAVDEVQFFDQDIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPDIMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|350546337|ref|ZP_08915728.1| thymidine kinase [Mycoplasma iowae 695]
gi|349504120|gb|EGZ31672.1| thymidine kinase [Mycoplasma iowae 695]
Length = 213
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 53/207 (25%)
Query: 149 GQEK---EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL 205
G+EK E+I GPMF+GK+ EL+RR++R +YA+ ++ + + D R + V++ D + +
Sbjct: 8 GKEKGWIELICGPMFAGKSEELLRRLKRLEYADVSFLLFKPSIDTR-SKKVVASRDGRNM 66
Query: 206 TAVSAVELNKLIPHTKD----IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSP 261
+A+ + +++ H + V+ IDE QF +
Sbjct: 67 SAIEFSDPYEILEHVLNNIVHPQVVAIDEAQFAD-------------------------- 100
Query: 262 FKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLA 321
P +V E +A++G IV VAALD F+ F +L A
Sbjct: 101 -------------------PKIVKVCEGLADSGVIVYVAALDRDFKNEPFQVTAALSCHA 141
Query: 322 ECVEKLTAVCMSCFRDAAFTKRIGQEK 348
E V KL+AVC C T+R+ + K
Sbjct: 142 EHVTKLSAVCTECGAPGTITQRLIENK 168
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 6/139 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD----ID 74
RR++R +YA+ ++ + + D R + VA+ D + ++A+ + +++ H +
Sbjct: 31 RRLKRLEYADVSFLLFKPSIDTR-SKKVVASRDGRNMSAIEFSDPYEILEHVLNNIVHPQ 89
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+ IDE QF P +V E +A++G IV VAALD F+ F +L AE V KL+A
Sbjct: 90 VVAIDEAQFADPKIVKVCEGLADSGVIVYVAALDRDFKNEPFQVTAALSCHAEHVTKLSA 149
Query: 134 VCMSCFRDAAFTKRIGQEK 152
VC C T+R+ + K
Sbjct: 150 VCTECGAPGTITQRLIENK 168
>gi|337293352|emb|CCB91341.1| Thymidine kinase [Waddlia chondrophila 2032/99]
Length = 209
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 54/208 (25%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
T+ + EVI G MFSGKT EL+ R+RR +YA M +++ D+R + +H+
Sbjct: 1 MTQTFSGKLEVICGSMFSGKTEELMLRLRRAEYAKKNVMTIKHEIDNRKSYSCIVSHNGV 60
Query: 204 KLTAVSAVE-----LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPI 257
+ TA +E LN L +DV+GIDE QF
Sbjct: 61 ERTA-QPIEPCKDGLNTLKQCVDGAVDVVGIDEIQF------------------------ 95
Query: 258 KRSPFKTLANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILS 316
FPD ++ M +GK V+VA LD F+ F + +
Sbjct: 96 ----------------------FPDEIIPILLMMVESGKRVLVAGLDMDFRCEPFGIVPT 133
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRI 344
L+ LA+ V KL A+C+ C DA FT+R+
Sbjct: 134 LMSLADEVCKLRAICVVCGNDANFTQRL 161
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 76/136 (55%), Gaps = 8/136 (5%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-----LNKLIPHTKD-I 73
R+RR +YA M +++ D+R + +H+ + TA +E LN L +
Sbjct: 27 RLRRAEYAKKNVMTIKHEIDNRKSYSCIVSHNGVERTA-QPIEPCKDGLNTLKQCVDGAV 85
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFFPD ++ M +GK V+VA LD F+ F + +L+ LA+ V KL
Sbjct: 86 DVVGIDEIQFFPDEIIPILLMMVESGKRVLVAGLDMDFRCEPFGIVPTLMSLADEVCKLR 145
Query: 133 AVCMSCFRDAAFTKRI 148
A+C+ C DA FT+R+
Sbjct: 146 AICVVCGNDANFTQRL 161
>gi|83319659|ref|YP_424134.1| thymidine kinase [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|109892484|sp|Q2SSX9.1|KITH_MYCCT RecName: Full=Thymidine kinase
gi|83283545|gb|ABC01477.1| thymidine kinase [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 209
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIP---H 69
F RR++ YA R + + + D+RY E + +H KL + S+ E+ +++
Sbjct: 34 EFIRRLKVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVKSSDEIKQIVEKENQ 93
Query: 70 TKDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ +DVIGIDE QFF +VV E +A+ G IV+V LD F+ F ++ L+ AE V
Sbjct: 94 IQQVDVIGIDEVQFFDENVVDIIEQLADNGIIVIVNGLDKDFRGLPFKNVDKLLVKAEFV 153
Query: 129 EKLTAVCMSCFRDAAFTKRI 148
KL A C C A ++RI
Sbjct: 154 TKLRARCHLCGSFANRSQRI 173
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E+I G MF+GKT E IRR++ YA R + + + D+RY E + +H KL + S
Sbjct: 21 ELITGCMFAGKTEEFIRRLKVLSYAKKRVLAFKPSIDNRYSVENIISHSGSKLDSYLVKS 80
Query: 210 AVELNKLIP---HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ E+ +++ + +DVIGIDE QF +
Sbjct: 81 SDEIKQIVEKENQIQQVDVIGIDEVQFFD------------------------------- 109
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+VV E +A+ G IV+V LD F+ F ++ L+ AE V K
Sbjct: 110 --------------ENVVDIIEQLADNGIIVIVNGLDKDFRGLPFKNVDKLLVKAEFVTK 155
Query: 327 LTAVCMSCFRDAAFTKRI 344
L A C C A ++RI
Sbjct: 156 LRARCHLCGSFANRSQRI 173
>gi|299144519|ref|ZP_07037598.1| thymidine kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517607|gb|EFI41347.1| thymidine kinase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 194
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 44/189 (23%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L R ++R+ A Y+ + + + D R D EK+ THD L+AV + +L
Sbjct: 13 GSMFSGKTSSLEREMKRFAIAGYKTVAFKPSIDTRADREKIVTHDNTYLSAVMVNNIFEL 72
Query: 217 IPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ + D +V+GIDE QF +GG
Sbjct: 73 VKYVSKSDFEVVGIDEVQF---LGG----------------------------------- 94
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
E +++ + N+GK VVVA LD + F + L+ ++ + K AVC C
Sbjct: 95 ----EVEEILKEINELLNSGKTVVVAGLDMDYTSKPFEIVKELMSRSDYLNKHHAVCTVC 150
Query: 335 FRDAAFTKR 343
DA + R
Sbjct: 151 GADAWVSHR 159
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDIDVI 76
R ++R+ A Y+ + + + D R D EK+ THD L+AV + +L+ + D +V+
Sbjct: 25 REMKRFAIAGYKTVAFKPSIDTRADREKIVTHDNTYLSAVMVNNIFELVKYVSKSDFEVV 84
Query: 77 GIDEGQFF----PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
GIDE QF +++ + N+GK VVVA LD + F + L+ ++ + K
Sbjct: 85 GIDEVQFLGGEVEEILKEINELLNSGKTVVVAGLDMDYTSKPFEIVKELMSRSDYLNKHH 144
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
AVC C DA + R + E I+
Sbjct: 145 AVCTVCGADAWVSHRKTKSDERIV 168
>gi|350267976|ref|YP_004879283.1| thymidine kinase [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349600863|gb|AEP88651.1| thymidine kinase [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 195
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D RY + V +H+ +T+ +
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDHRYSEDAVVSHNGTSMTSYAISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DVI +DE QF +
Sbjct: 71 AADIWDHISESTDVIAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V+ S+A+ G V+ A LD F+ F + S++ +AE V KL AVC
Sbjct: 95 ---------EEIVAVLSSLADKGYRVIAAGLDMDFRGEPFGVVPSIMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR++R YA + + D RY + V +H+ +T+ + + H ++ DVI
Sbjct: 27 RRVKRATYAKQEVRVFKPVIDHRYSEDAVVSHNGTSMTSYAISSAADIWDHISESTDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DE QFF ++V+ S+A+ G V+ A LD F+ F + S++ +AE V KL AVC
Sbjct: 87 VDEVQFFDEEIVAVLSSLADKGYRVIAAGLDMDFRGEPFGVVPSIMAIAESVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|304373400|ref|YP_003856609.1| Thymidine kinase [Mycoplasma hyorhinis HUB-1]
gi|378836079|ref|YP_005205355.1| thymidine kinase [Mycoplasma hyorhinis GDL-1]
gi|385858616|ref|YP_005905127.1| thymidine kinase [Mycoplasma hyorhinis MCLD]
gi|423263228|ref|YP_007013253.1| thymidine kinase [Mycoplasma hyorhinis SK76]
gi|304309591|gb|ADM22071.1| Thymidine kinase [Mycoplasma hyorhinis HUB-1]
gi|330723705|gb|AEC46075.1| thymidine kinase [Mycoplasma hyorhinis MCLD]
gi|367460864|gb|AEX14387.1| thymidine kinase [Mycoplasma hyorhinis GDL-1]
gi|422035765|gb|AFX74607.1| Thymidine kinase [Mycoplasma hyorhinis SK76]
Length = 192
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 49/203 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI GPMFSGK+ ELI+RIR YAN + + V+ D R+ T ++ + K+ +
Sbjct: 11 EVITGPMFSGKSDELIKRIRTLSYANVKTLAVKPRIDSRFSTNEIVSRAGTKIPTYVVET 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
++ L +K I IDE QF +
Sbjct: 71 VADIKSLFEKSK-YKAIAIDEAQFFD---------------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D+V + E +AN G V++ LD + R F + SL+ +AE + KL A
Sbjct: 96 -----------KDLVPYVEELANQGIRVIICGLDQDYLRRPFGVMPSLLAMAEHITKLQA 144
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
+C+ C A+ T R + ++++
Sbjct: 145 ICVICKNAASTTFRTIKSNKLKV 167
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
+RIR YAN + + V+ D R+ T ++ + K+ + ++ L +K
Sbjct: 27 KRIRTLSYANVKTLAVKPRIDSRFSTNEIVSRAGTKIPTYVVETVADIKSLFEKSK-YKA 85
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF D+V + E +AN G V++ LD + R F + SL+ +AE + KL A+
Sbjct: 86 IAIDEAQFFDKDLVPYVEELANQGIRVIICGLDQDYLRRPFGVMPSLLAMAEHITKLQAI 145
Query: 135 CMSCFRDAAFTKR-IGQEKEVILGPM 159
C+ C A+ T R I K ++G +
Sbjct: 146 CVICKNAASTTFRTIKSNKLKVIGDL 171
>gi|336398971|ref|ZP_08579771.1| Thymidine kinase [Prevotella multisaccharivorax DSM 17128]
gi|336068707|gb|EGN57341.1| Thymidine kinase [Prevotella multisaccharivorax DSM 17128]
Length = 204
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 82/192 (42%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R + A MI + A D+RY V +HD + + +
Sbjct: 16 EVVCGSMFSGKTEELIRRLKRARIARQAVMIFKPAIDNRYSKVDVVSHDHNSILSTPIKD 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ + DVIGIDE QF + D + VC
Sbjct: 76 ASSMLKAAQGYDVIGIDEAQFFD-----DSLIGVCNR----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A G V+VA LD + F + L+ +A+ V K+ A+C+
Sbjct: 108 -----------------LAYHGMRVIVAGLDMDYLGQPFGPMPQLLAIADEVTKVHAICV 150
Query: 333 SCFRDAAFTKRI 344
C A + R+
Sbjct: 151 KCGSLAYASHRL 162
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R + A MI + A D+RY V +HD + + + + ++ + DVIGI
Sbjct: 32 RRLKRARIARQAVMIFKPAIDNRYSKVDVVSHDHNSILSTPIKDASSMLKAAQGYDVIGI 91
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D ++ +A G V+VA LD + F + L+ +A+ V K+ A+C+
Sbjct: 92 DEAQFFDDSLIGVCNRLAYHGMRVIVAGLDMDYLGQPFGPMPQLLAIADEVTKVHAICVK 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + +V+LG
Sbjct: 152 CGSLAYASHRLVKSNAQVMLG 172
>gi|311070225|ref|YP_003975148.1| thymidine kinase [Bacillus atrophaeus 1942]
gi|419821402|ref|ZP_14344996.1| thymidine kinase [Bacillus atrophaeus C89]
gi|310870742|gb|ADP34217.1| thymidine kinase [Bacillus atrophaeus 1942]
gi|388474375|gb|EIM11104.1| thymidine kinase [Bacillus atrophaeus C89]
Length = 198
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPAIDNRYSEEAVVSHNGTSMTSHVIAA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF + +
Sbjct: 71 PAEIWNHISETTDVIAVDEVQFFDRM---------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ S+A+ G V+ A LD F+ F + L+ +AE V KL AVC
Sbjct: 97 -----------IIEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPDLMAMAETVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVRVFKPAIDNRYSEEAVVSHNGTSMTSHVIAAPAEIWNHISETTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF ++ S+A+ G V+ A LD F+ F + L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFDRMIIEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPDLMAMAETVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|162446944|ref|YP_001620076.1| thymidine kinase [Acholeplasma laidlawii PG-8A]
gi|161985051|gb|ABX80700.1| thymidine kinase [Acholeplasma laidlawii PG-8A]
Length = 197
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 47/203 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE-KVSTHDQQKLTAVSAV 211
EV+ GPMF+GKT ELIRR +R +YA ++ + D+RY ++ ++ +H A+
Sbjct: 11 EVVCGPMFAGKTEELIRRAKRLKYAKQNYLVFKPVIDNRYSSKAEIVSHSLLTENAILIE 70
Query: 212 ELNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ ++ H D I+ + IDE QF +
Sbjct: 71 KSKDILEHMNDSIEAVIIDEAQFFD----------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
D+V A+ +A++G V++ LD F+ F + L+ +AE V KLTA+
Sbjct: 96 ----------QDIVEIADRLADSGVRVIIGGLDRDFKGEPFGPMPQLLAIAEFVVKLTAI 145
Query: 331 CMSCFRDAAFTKRIGQEKEVRIE 353
C A T+RI K R++
Sbjct: 146 CPKTGTPATRTQRIINGKPARMD 168
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTE-KVATHDQQKLTAVSAVELNKLIPHTKD-ID 74
RR +R +YA ++ + D+RY ++ ++ +H A+ + ++ H D I+
Sbjct: 25 LIRRAKRLKYAKQNYLVFKPVIDNRYSSKAEIVSHSLLTENAILIEKSKDILEHMNDSIE 84
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+ IDE QFF D+V A+ +A++G V++ LD F+ F + L+ +AE V KLTA
Sbjct: 85 AVIIDEAQFFDQDIVEIADRLADSGVRVIIGGLDRDFKGEPFGPMPQLLAIAEFVVKLTA 144
Query: 134 VCMSCFRDAAFTKRI 148
+C A T+RI
Sbjct: 145 ICPKTGTPATRTQRI 159
>gi|448618508|ref|ZP_21666745.1| thymidine kinase [Haloferax mediterranei ATCC 33500]
gi|445746879|gb|ELZ98337.1| thymidine kinase [Haloferax mediterranei ATCC 33500]
Length = 195
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 80/196 (40%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR+RR + A + + DDRY V TH + A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDASVVPS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ +++ DV+ IDE F S + + VC
Sbjct: 71 EGDGVWQIVEELNGEDVVAIDEANFF-----SAELVGVC--------------------- 104
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
E +A GK VVV+ D TF+ FN + L+ LAE V+KL
Sbjct: 105 -------------------EQLAADGKRVVVSGTDQTFRAEPFNPVPQLMALAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTICGEPATRNQRL 161
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR + A + + DDRY V TH + A + +++
Sbjct: 25 LLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDASVVPSEGDGVWQIVEELNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V E +A GK VVV+ D TF+ FN + L+ LAE V+KL
Sbjct: 85 EDVVAIDEANFFSAELVGVCEQLAADGKRVVVSGTDQTFRAEPFNPVPQLMALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTICGEPATRNQRL 161
>gi|226226174|ref|YP_002760280.1| thymidine kinase [Gemmatimonas aurantiaca T-27]
gi|226089365|dbj|BAH37810.1| thymidine kinase [Gemmatimonas aurantiaca T-27]
Length = 203
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 53/201 (26%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTA 207
G EV+ G MFSGKT EL+RR+RR A R + + DDRY VS+HD++ A
Sbjct: 9 GGWMEVVAGVMFSGKTEELLRRVRRATIARKRVQVFKSHLDDRYAGLWAVSSHDRRTFEA 68
Query: 208 V----SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
SA L +L P + VI IDE QF++
Sbjct: 69 TPVDSSAQILLRLDPMAQ---VIAIDEAQFLDA--------------------------- 98
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
+V A S+A+ G+ V++A D F+ F + L+ ++E
Sbjct: 99 ------------------GIVQVASSLADRGRRVILAGTDTDFRGEPFGAMPQLMAVSEM 140
Query: 324 VEKLTAVCMSCFRDAAFTKRI 344
V+KL A+C+ C A+ +R+
Sbjct: 141 VDKLHAICVLCGSPASRNQRL 161
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 9/138 (6%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAV----SAVELNKLIPHTK 71
RR+RR A R + + DDRY V++HD++ A SA L +L P +
Sbjct: 27 LLRRVRRATIARKRVQVFKSHLDDRYAGLWAVSSHDRRTFEATPVDSSAQILLRLDPMAQ 86
Query: 72 DIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
VI IDE QF +V A S+A+ G+ V++A D F+ F + L+ ++E V+K
Sbjct: 87 ---VIAIDEAQFLDAGIVQVASSLADRGRRVILAGTDTDFRGEPFGAMPQLMAVSEMVDK 143
Query: 131 LTAVCMSCFRDAAFTKRI 148
L A+C+ C A+ +R+
Sbjct: 144 LHAICVLCGSPASRNQRL 161
>gi|300711174|ref|YP_003736988.1| thymidine kinase [Halalkalicoccus jeotgali B3]
gi|299124857|gb|ADJ15196.1| thymidine kinase [Halalkalicoccus jeotgali B3]
Length = 179
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA---VSAVELNKLIPHTKD 72
RR+RR + A + + A DDRY V TH+ ++ A + E + IP +
Sbjct: 8 ELLRRLRRAEIAGQEVAVFKPATDDRYGKATVGTHNGRQWDADVIGTDAEAVRAIPDRLN 67
Query: 73 ID-VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+ V+ IDE FF P +V E +AN G+ V+V+ D TF+ F + L+ +AE VEK
Sbjct: 68 GEQVVAIDEANFFSPALVDVCEELANDGRRVIVSGTDQTFRGEPFEPLPQLLAIAEYVEK 127
Query: 131 LTAVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 128 FQAICSVCGEPASRNQRL 145
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 41/186 (22%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MF+GKT EL+RR+RR + A + + A DDRY V TH+ ++
Sbjct: 1 MFAGKTEELLRRLRRAEIAGQEVAVFKPATDDRYGKATVGTHNGRQW------------- 47
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
D DVIG D + V I D+ +Q I + F +
Sbjct: 48 ---DADVIGTD-AEAVRAI--PDRLNG------EQVVAIDEANFFS-------------- 81
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
P +V E +AN G+ V+V+ D TF+ F + L+ +AE VEK A+C C A
Sbjct: 82 --PALVDVCEELANDGRRVIVSGTDQTFRGEPFEPLPQLLAIAEYVEKFQAICSVCGEPA 139
Query: 339 AFTKRI 344
+ +R+
Sbjct: 140 SRNQRL 145
>gi|397691452|ref|YP_006528706.1| Thymidine kinase [Melioribacter roseus P3M]
gi|395812944|gb|AFN75693.1| Thymidine kinase [Melioribacter roseus P3M]
Length = 189
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R A + I + D RY ++ +H++Q L ++ +
Sbjct: 16 EVIAGCMFSGKTEELIRRLKRAIIAKQKVKIFKPKIDTRYSETEIVSHNEQSLPSILIDK 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ D VIGIDE QF ++ K + VC +
Sbjct: 76 AEDILELAGDAQVIGIDEAQFFDL-----KLVDVCNK----------------------- 107
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+A+ GK V+VA LD ++ F I L+ AE + K A+C+
Sbjct: 108 -----------------LADEGKRVIVAGLDQDYRGEPFEPIPQLLATAEFITKTLAICV 150
Query: 333 SCFRDAAFTKR 343
C A T+R
Sbjct: 151 VCGNIADRTQR 161
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R A + I + D RY ++ +H++Q L ++ + ++ D VIGI
Sbjct: 32 RRLKRAIIAKQKVKIFKPKIDTRYSETEIVSHNEQSLPSILIDKAEDILELAGDAQVIGI 91
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +V +A+ GK V+VA LD ++ F I L+ AE + K A+C+
Sbjct: 92 DEAQFFDLKLVDVCNKLADEGKRVIVAGLDQDYRGEPFEPIPQLLATAEFITKTLAICVV 151
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A T+R I + V++G
Sbjct: 152 CGNIADRTQRKIVSHERVLVG 172
>gi|227499424|ref|ZP_03929535.1| possible thymidine kinase [Anaerococcus tetradius ATCC 35098]
gi|227218486|gb|EEI83729.1| possible thymidine kinase [Anaerococcus tetradius ATCC 35098]
Length = 207
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 45/199 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKTT L R + R + ANY+ + + + D+R D +K+ +HD +L A+ + ++
Sbjct: 17 GSMFSGKTTSLWRELYRMRIANYKIVAFKPSIDNRDDDKKIVSHDNLELDAIKVENIKEI 76
Query: 217 IPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ + K DID IGIDE QF P S + NE A+N+
Sbjct: 77 LAYAKSNDIDCIGIDEVQFF---------------------PNDPSEIIEIFNELMAMNI 115
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
+VV+ LD + F I ++P+A+ + K A+C SC
Sbjct: 116 T---------------------IVVSGLDMDYMARPFEIIKEIMPIADELVKHHAICASC 154
Query: 335 FRDA-AFTKRIGQEKEVRI 352
DA A K+ + ++I
Sbjct: 155 GEDAWASYKKSSDDSRIQI 173
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 9/149 (6%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DID 74
R + R + ANY+ + + + D+R D +K+ +HD +L A+ + +++ + K DID
Sbjct: 27 LWRELYRMRIANYKIVAFKPSIDNRDDDKKIVSHDNLELDAIKVENIKEILAYAKSNDID 86
Query: 75 VIGIDEGQFFPDVVS-----FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
IGIDE QFFP+ S F E MA +VV+ LD + F I ++P+A+ +
Sbjct: 87 CIGIDEVQFFPNDPSEIIEIFNELMA-MNITIVVSGLDMDYMARPFEIIKEIMPIADELV 145
Query: 130 KLTAVCMSCFRDA-AFTKRIGQEKEVILG 157
K A+C SC DA A K+ + + +G
Sbjct: 146 KHHAICASCGEDAWASYKKSSDDSRIQIG 174
>gi|420159162|ref|ZP_14665969.1| thymidine kinase [Capnocytophaga ochracea str. Holt 25]
gi|394762460|gb|EJF44679.1| thymidine kinase [Capnocytophaga ochracea str. Holt 25]
Length = 197
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + + D RYD + +H+ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DV+GIDE QF + D+ + VC E
Sbjct: 77 AASIMLLADGCDVVGIDEAQFFD-----DEIVHVCNE----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + + D RYD + +H+ ++ + ++ DV+GI
Sbjct: 33 RRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEAAASIMLLADGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVHVCNELANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ +++ +LG
Sbjct: 153 TGNLANYSFRKVSNDQQRLLG 173
>gi|345433308|dbj|BAK69311.1| thymidine kinase [Geobacillus stearothermophilus ATCC 7953]
Length = 207
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G M SGK+ ELIRR+RR Q+A + + D+RY ++V +H+ + A+ +
Sbjct: 11 EVICGCMLSGKSEELIRRVRRAQFAKQEVKVFKPTIDNRYSEDEVVSHNGNSVIAIPVAT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ + I T DV+ IDE Q + +N
Sbjct: 71 PAEMFRYISATT--DVVAIDEVQ-------------------------------SFSN-- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL A
Sbjct: 96 ------------DIIDVVQTLADGGCRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLEA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C A+ T+R+
Sbjct: 144 VCTVCGSPASRTQRL 158
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDIDV 75
RR+RR Q+A + + D+RY ++V +H+ + A+ + E+ + I T D V
Sbjct: 27 RRVRRAQFAKQEVKVFKPTIDNRYSEDEVVSHNGNSVIAIPVATPAEMFRYISATTD--V 84
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE Q F D++ +++A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 VAIDEVQSFSNDIIDVVQTLADGGCRVIAAGLDQDFRGEPFGPVPALMAIAESVTKLEAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CTVCGSPASRTQRL 158
>gi|429748009|ref|ZP_19281236.1| thymidine kinase [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429161726|gb|EKY04103.1| thymidine kinase [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 198
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 45/179 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + + D RYD + +H+ ++ +
Sbjct: 18 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEA 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DV+GIDE QF + D+ + VC E
Sbjct: 78 AASIMLLADGCDVVGIDEAQFFD-----DEIVHVCNE----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 110 -----------------LANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVC 151
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + + D RYD + +H+ ++ + ++ DV+GI
Sbjct: 34 RRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEAAASIMLLADGCDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 94 DEAQFFDDEIVHVCNELANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTR 153
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ +++ +LG
Sbjct: 154 TGNLANYSFRKVSNDQQRLLG 174
>gi|315225581|ref|ZP_07867390.1| thymidine kinase [Capnocytophaga ochracea F0287]
gi|314944398|gb|EFS96438.1| thymidine kinase [Capnocytophaga ochracea F0287]
Length = 198
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 45/179 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + + D RYD + +H+ ++ +
Sbjct: 18 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEA 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DV+GIDE QF + D+ + VC E
Sbjct: 78 AASIMLLADGCDVVGIDEAQFFD-----DEIVHVCNE----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 110 -----------------LANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVC 151
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + + D RYD + +H+ ++ + ++ DV+GI
Sbjct: 34 RRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEAAASIMLLADGCDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 94 DEAQFFDDEIVHVCNELANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTR 153
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ +++ +LG
Sbjct: 154 TGNLANYSFRKVSNDQQRLLG 174
>gi|256820157|ref|YP_003141436.1| thymidine kinase [Capnocytophaga ochracea DSM 7271]
gi|256581740|gb|ACU92875.1| Thymidine kinase [Capnocytophaga ochracea DSM 7271]
Length = 197
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + + D RYD + +H+ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DV+GIDE QF + D+ + VC E
Sbjct: 77 AASIMLLADGCDVVGIDEAQFFD-----DEIVHVCNE----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLANYSFR 162
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + + D RYD + +H+ ++ + ++ DV+GI
Sbjct: 33 RRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEAAASIMLLADGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVHVCNELANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ +++ +LG
Sbjct: 153 TGNLANYSFRKVSNDQQRLLG 173
>gi|257069370|ref|YP_003155625.1| thymidine kinase [Brachybacterium faecium DSM 4810]
gi|256560188|gb|ACU86035.1| thymidine kinase [Brachybacterium faecium DSM 4810]
Length = 191
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 80/195 (41%), Gaps = 49/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA---VS 209
VI GPMF+GKT EL+RR+ R Q A + + D R E++STH + A
Sbjct: 10 HVIAGPMFAGKTEELLRRVHRAQLAGLDVQVFGHRLDTRGGAERLSTHAGRSAPARLVEQ 69
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A +L I T+ D++ IDE QF
Sbjct: 70 AAQLRAAIGATRP-DLVAIDEAQFFG---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
P +V E + AG V VA L T++ F I L+ +AE V KLTA
Sbjct: 95 -----------PPIVPVIEELLAAGIQVEVAGLCVTYEGGPFAPIPHLMAVAEEVVKLTA 143
Query: 330 VCMSCFRDAAFTKRI 344
VC C DAAF R+
Sbjct: 144 VCTVCGADAAFHVRL 158
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA---VSAVELNKLIPHTKDI 73
RR+ R Q A + + D R E+++TH + A A +L I T+
Sbjct: 24 LLRRVHRAQLAGLDVQVFGHRLDTRGGAERLSTHAGRSAPARLVEQAAQLRAAIGATRP- 82
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
D++ IDE QFF P +V E + AG V VA L T++ F I L+ +AE V KLT
Sbjct: 83 DLVAIDEAQFFGPPIVPVIEELLAAGIQVEVAGLCVTYEGGPFAPIPHLMAVAEEVVKLT 142
Query: 133 AVCMSCFRDAAFTKRIGQEKEVILGPMFS--GKTTELIRRIRRYQ 175
AVC C DAAF R+ + L P + G R RR++
Sbjct: 143 AVCTVCGADAAFHVRLVADGADALQPTAAQVGGAESYQARCRRHR 187
>gi|163786833|ref|ZP_02181281.1| 2-amino-3-ketobutyrate coenzyme A ligase [Flavobacteriales
bacterium ALC-1]
gi|159878693|gb|EDP72749.1| 2-amino-3-ketobutyrate coenzyme A ligase [Flavobacteriales
bacterium ALC-1]
Length = 215
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 47/192 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RYD ++V +HD + + + V
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKFARQKVEIFKPAIDVRYDDDEVVSHDANSIRS-TPVP 75
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
IP D DV+GIDE QF + D+ + VC +
Sbjct: 76 AAANIPILADGCDVVGIDEAQFFD-----DEIVRVCND---------------------- 108
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD F+ F + L+ AE V K+ A+C
Sbjct: 109 ------------------LANKGIRVIVAGLDMDFKGNPFGPMPYLMATAEYVTKVHAIC 150
Query: 332 MSCFRDAAFTKR 343
A ++ R
Sbjct: 151 TKTGNLAQYSYR 162
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-ID 74
RR++R ++A + I + A D RYD ++V +HD + + + V IP D D
Sbjct: 30 ELIRRLKRAKFARQKVEIFKPAIDVRYDDDEVVSHDANSIRS-TPVPAAANIPILADGCD 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF D +V +AN G V+VA LD F+ F + L+ AE V K+ A
Sbjct: 89 VVGIDEAQFFDDEIVRVCNDLANKGIRVIVAGLDMDFKGNPFGPMPYLMATAEYVTKVHA 148
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
+C A ++ R + +++L
Sbjct: 149 ICTKTGNLAQYSYRKAKSDDLVL 171
>gi|393778948|ref|ZP_10367205.1| thymidine kinase [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|420149834|ref|ZP_14657002.1| thymidine kinase [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|392611130|gb|EIW93880.1| thymidine kinase [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|394753031|gb|EJF36636.1| thymidine kinase [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 197
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 45/179 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + + D RYD + +H+ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DV+GIDE QF + D+ + VC E
Sbjct: 77 AASIMLLADGCDVVGIDEAQFFD-----DEIVHVCNE----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVC 150
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + + D RYD + +H+ ++ + ++ DV+GI
Sbjct: 33 RRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEAAASIMLLADGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVHVCNELANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ +++ +LG
Sbjct: 153 TGNLANYSFRKVSNDQQRLLG 173
>gi|429756489|ref|ZP_19289081.1| thymidine kinase [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171230|gb|EKY12864.1| thymidine kinase [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 198
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 45/179 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + + D RYD + +H+ ++ +
Sbjct: 18 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEA 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DV+GIDE QF + D+ + VC E
Sbjct: 78 AASIMLLADGCDVVGIDEAQFFD-----DEIVHVCNE----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 110 -----------------LANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVC 151
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + + D RYD + +H+ ++ + ++ DV+GI
Sbjct: 34 RRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNANEIPSTPVEAAASIMLLADGCDVVGI 93
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 94 DEAQFFDDEIVHVCNELANRGVRVIVAGLDMDYKGKPFGPMPFLMATAEYVTKVHAVCTR 153
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ +++ +LG
Sbjct: 154 TGNLANYSFRKVSNDQQRLLG 174
>gi|326335800|ref|ZP_08201980.1| thymidine kinase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692039|gb|EGD33998.1| thymidine kinase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 198
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 45/196 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR ++A + I + D R+ E + +H+ ++ A+
Sbjct: 16 EVICGSMFSGKTEELIRRLRRAEFAKQKIAIFKPEIDTRFRKECIVSHNTTQIKAIPVQS 75
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ ++ +VIGIDE QF
Sbjct: 76 ATNIRILAQNCEVIGIDEAQFFS------------------------------------- 98
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D+V +AN+G V+VA LD F F + +L+ +AE V K+ A+C
Sbjct: 99 --------SDIVEVCNDLANSGVRVIVAGLDMDFLGRPFGPMPALMAIAEYVTKVHAICT 150
Query: 333 SCFRDAAFTKRIGQEK 348
A ++ R E+
Sbjct: 151 RTGNLAHYSFRKASEQ 166
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR ++A + I + D R+ E + +H+ ++ A+ + ++ +VIGI
Sbjct: 32 RRLRRAEFAKQKIAIFKPEIDTRFRKECIVSHNTTQIKAIPVQSATNIRILAQNCEVIGI 91
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D+V +AN+G V+VA LD F F + +L+ +AE V K+ A+C
Sbjct: 92 DEAQFFSSDIVEVCNDLANSGVRVIVAGLDMDFLGRPFGPMPALMAIAEYVTKVHAICTR 151
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ ++ ++ + +LG
Sbjct: 152 TGNLAHYSFRKASEQSQFLLG 172
>gi|384267241|ref|YP_005422948.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387900355|ref|YP_006330651.1| thymidine kinase [Bacillus amyloliquefaciens Y2]
gi|380500594|emb|CCG51632.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387174465|gb|AFJ63926.1| thymidine kinase [Bacillus amyloliquefaciens Y2]
Length = 196
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISESTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ S+A+ G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 97 -----------IIGDLSSLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISSSAEIWDHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ S+A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFGESIIGDLSSLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|284504261|ref|YP_003406976.1| thymidine kinase [Marseillevirus]
gi|282935699|gb|ADB04014.1| thymidine kinase [Marseillevirus]
Length = 186
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 94/219 (42%), Gaps = 70/219 (31%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTE---KVSTHDQ------- 202
E+I GPM SGKTTEL RR+ + ++ + V +KD R + STH+
Sbjct: 6 EIICGPMRSGKTTELRRRLGVFSSIGFKVLYVNSSKDTRKGPDGSVAFSTHNSELSGKND 65
Query: 203 ----QKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIK 258
QK+T + VE + DVIGIDE QF +K++
Sbjct: 66 SISCQKVTFIKEVEFSPF-------DVIGIDEAQF-----------------FKEE---- 97
Query: 259 RSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLI 318
+FP+ + M +GK V+++ LDG F++ L L+
Sbjct: 98 --------------------DFPEEIM---EMVRSGKRVIISGLDGDFEQKKMGKFLELL 134
Query: 319 PLAECVEKLTAVCMSCFR-----DAAFTKRIGQEKEVRI 352
P A+ V KL A C C + A FTKR+ ++KE +
Sbjct: 135 PQADSVAKLLASCDFCAKRKLMVPAPFTKRLTEDKEQEV 173
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 30/157 (19%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDR-----------YDTEKVATHDQ---QKLTAVSAVELN 64
RR+ + ++ + V +KD R +++E +D QK+T + VE +
Sbjct: 22 RRLGVFSSIGFKVLYVNSSKDTRKGPDGSVAFSTHNSELSGKNDSISCQKVTFIKEVEFS 81
Query: 65 KLIPHTKDIDVIGIDEGQFFPDVVSFAES---MANAGKIVVVAALDGTFQRTGFNDILSL 121
DVIGIDE QFF + F E M +GK V+++ LDG F++ L L
Sbjct: 82 PF-------DVIGIDEAQFFKEE-DFPEEIMEMVRSGKRVIISGLDGDFEQKKMGKFLEL 133
Query: 122 IPLAECVEKLTAVCMSCFR-----DAAFTKRIGQEKE 153
+P A+ V KL A C C + A FTKR+ ++KE
Sbjct: 134 LPQADSVAKLLASCDFCAKRKLMVPAPFTKRLTEDKE 170
>gi|338536288|ref|YP_004669622.1| thymidine kinase [Myxococcus fulvus HW-1]
gi|337262384|gb|AEI68544.1| thymidine kinase [Myxococcus fulvus HW-1]
Length = 182
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVE--LNKLIPHTKDID 74
RR++R Y + + + D+RYD V +H Q K+ TA+ E +L P D
Sbjct: 11 RRVQRAVYGKQKVQVFKPRLDNRYDESAVVSHSQLKVMSTAIERAEEIFYRLAP---DTQ 67
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+GIDE QFF +VV+ E++AN G V+ A LD +Q F + L+ ++E V K A
Sbjct: 68 VVGIDEVQFFGSEVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLMAVSEYVTKELA 127
Query: 134 VCMSCFRDAAFTKRIGQEKE-VILG 157
+C+ C A ++RI E V++G
Sbjct: 128 ICVVCGNPANRSQRIVSSGERVVVG 152
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 83/190 (43%), Gaps = 52/190 (27%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSAVE--LN 214
MFSGKT ELIRR++R Y + + + D+RYD V +H Q K+ TA+ E
Sbjct: 1 MFSGKTEELIRRVQRAVYGKQKVQVFKPRLDNRYDESAVVSHSQLKVMSTAIERAEEIFY 60
Query: 215 KLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+L P D V+GIDE QF GS
Sbjct: 61 RLAP---DTQVVGIDEVQFF----GS---------------------------------- 79
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
+VV+ E++AN G V+ A LD +Q F + L+ ++E V K A+C+ C
Sbjct: 80 -------EVVAVVEALANKGLRVICAGLDQDYQGRPFEPMPQLMAVSEYVTKELAICVVC 132
Query: 335 FRDAAFTKRI 344
A ++RI
Sbjct: 133 GNPANRSQRI 142
>gi|297621129|ref|YP_003709266.1| Thymidine kinase [Waddlia chondrophila WSU 86-1044]
gi|297376430|gb|ADI38260.1| Thymidine kinase [Waddlia chondrophila WSU 86-1044]
Length = 209
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 54/208 (25%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
T+ + EVI G MFSGKT EL+ R+RR +YA M +++ D+R + +H
Sbjct: 1 MTQTFSGKLEVICGSMFSGKTEELMLRLRRAEYAKKNVMTIKHEIDNRKSYSCIVSHSGV 60
Query: 204 KLTAVSAVE-----LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPI 257
+ TA +E LN L +DV+GIDE QF
Sbjct: 61 ERTA-QPIEPCKDGLNTLKRCVDGAVDVVGIDEIQF------------------------ 95
Query: 258 KRSPFKTLANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILS 316
FPD ++ M +GK V+VA LD F+ F + +
Sbjct: 96 ----------------------FPDEIIPILLMMVESGKRVLVAGLDMDFRCEPFGIVPT 133
Query: 317 LIPLAECVEKLTAVCMSCFRDAAFTKRI 344
L+ LA+ V KL A+C+ C DA FT+R+
Sbjct: 134 LMSLADEVCKLRAICVVCGNDANFTQRL 161
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-----LNKLIPHTKD-I 73
R+RR +YA M +++ D+R + +H + TA +E LN L +
Sbjct: 27 RLRRAEYAKKNVMTIKHEIDNRKSYSCIVSHSGVERTA-QPIEPCKDGLNTLKRCVDGAV 85
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFFPD ++ M +GK V+VA LD F+ F + +L+ LA+ V KL
Sbjct: 86 DVVGIDEIQFFPDEIIPILLMMVESGKRVLVAGLDMDFRCEPFGIVPTLMSLADEVCKLR 145
Query: 133 AVCMSCFRDAAFTKRI 148
A+C+ C DA FT+R+
Sbjct: 146 AICVVCGNDANFTQRL 161
>gi|269957052|ref|YP_003326841.1| Thymidine kinase [Xylanimonas cellulosilytica DSM 15894]
gi|269305733|gb|ACZ31283.1| Thymidine kinase [Xylanimonas cellulosilytica DSM 15894]
Length = 196
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Query: 32 MIVRYAKDDRYDTEKVATHDQQKL---TAVSAVELNKLIPHTKDIDVIGIDEGQFF-PDV 87
++V +A D R K+A+H ++ TA A E+ L+ T +++ IDE QFF PD+
Sbjct: 48 VVVNHALDVRAGGGKIASHSGLEIPSATASEAAEIPGLV--TPGTELVAIDEAQFFGPDL 105
Query: 88 VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKR 147
V +A+ G +VVVA L TF F + +L+ +AE V KLTAVC C RDAA+ R
Sbjct: 106 VDVVLRLADDGLVVVVAGLCVTFDGRPFEPLPALMAVAENVVKLTAVCTICGRDAAYHVR 165
Query: 148 I 148
+
Sbjct: 166 L 166
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 50/203 (24%)
Query: 145 TKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQK 204
+ R EV+ GPMF+GK+ EL+RR+RR + A ++V +A D R K+++H +
Sbjct: 11 SARTAGRVEVVAGPMFAGKSEELVRRVRRARIAGRGVVVVNHALDVRAGGGKIASHSGLE 70
Query: 205 L---TAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSP 261
+ TA A E+ L+ T +++ IDE QF
Sbjct: 71 IPSATASEAAEIPGLV--TPGTELVAIDEAQFFG-------------------------- 102
Query: 262 FKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLA 321
PD+V +A+ G +VVVA L TF F + +L+ +A
Sbjct: 103 -------------------PDLVDVVLRLADDGLVVVVAGLCVTFDGRPFEPLPALMAVA 143
Query: 322 ECVEKLTAVCMSCFRDAAFTKRI 344
E V KLTAVC C RDAA+ R+
Sbjct: 144 ENVVKLTAVCTICGRDAAYHVRL 166
>gi|154687821|ref|YP_001422982.1| thymidine kinase [Bacillus amyloliquefaciens FZB42]
gi|385266615|ref|ZP_10044702.1| thymidine kinase [Bacillus sp. 5B6]
gi|452857330|ref|YP_007499013.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|166220759|sp|A7Z9S5.1|KITH_BACA2 RecName: Full=Thymidine kinase
gi|154353672|gb|ABS75751.1| Tdk [Bacillus amyloliquefaciens FZB42]
gi|385151111|gb|EIF15048.1| thymidine kinase [Bacillus sp. 5B6]
gi|452081590|emb|CCP23360.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 194
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISESTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ S+A+ G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 97 -----------IIGDLSSLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISSSAEIWDHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ S+A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFGESIIGDLSSLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|332878274|ref|ZP_08446000.1| thymidine kinase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683725|gb|EGJ56596.1| thymidine kinase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 201
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR Q+A + I + + D RYD + +H+ ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNATEIPSTPVEA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ DV+GIDE QF + D+ + VC +
Sbjct: 77 AASILLLADGCDVVGIDEAQFFD-----DEIVNVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 109 -----------------LANRGVRVIVAGLDMDYKGNPFGPMPYLMATAEYVTKVHAVCT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGHLANYSFR 162
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+RR Q+A + I + + D RYD + +H+ ++ + ++ DV+GI
Sbjct: 33 RRLRRAQFAKQKVEIFKPSFDTRYDDTNIVSHNATEIPSTPVEAAASILLLADGCDVVGI 92
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D +V+ +AN G V+VA LD ++ F + L+ AE V K+ AVC
Sbjct: 93 DEAQFFDDEIVNVCNDLANRGVRVIVAGLDMDYKGNPFGPMPYLMATAEYVTKVHAVCTR 152
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
A ++ +++ + + +LG
Sbjct: 153 TGHLANYSFRKVPNDSQRMLG 173
>gi|441496863|ref|ZP_20979089.1| Thymidine kinase [Fulvivirga imtechensis AK7]
gi|441439336|gb|ELR72654.1| Thymidine kinase [Fulvivirga imtechensis AK7]
Length = 173
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R A + I + + D RY V +H++ + + N ++ D DV+GI
Sbjct: 11 RRLNRALIARQKVEIFKPSIDVRYHKSDVVSHNETSIRSTPVDFANDILLMAGDCDVVGI 70
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++V+ +AN GK V+VA LD F+ F + L+ +AE V K+ A+C +
Sbjct: 71 DEAQFFDQEIVNVCNKLANNGKRVIVAGLDMDFEGKPFGPMPYLLAVAEFVTKVHAICAN 130
Query: 138 CFRDAAFTKRIGQEK-EVILG 157
A+F+ R+ E+ +V LG
Sbjct: 131 TGELASFSFRLTDEQSKVYLG 151
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 45/190 (23%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MFSGKT ELIRR+ R A + I + + D RY V +H++ + + N ++
Sbjct: 1 MFSGKTEELIRRLNRALIARQKVEIFKPSIDVRYHKSDVVSHNETSIRSTPVDFANDILL 60
Query: 219 HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPP 278
D DV+GIDE QF +
Sbjct: 61 MAGDCDVVGIDEAQFFD------------------------------------------- 77
Query: 279 EFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 338
++V+ +AN GK V+VA LD F+ F + L+ +AE V K+ A+C + A
Sbjct: 78 --QEIVNVCNKLANNGKRVIVAGLDMDFEGKPFGPMPYLLAVAEFVTKVHAICANTGELA 135
Query: 339 AFTKRIGQEK 348
+F+ R+ E+
Sbjct: 136 SFSFRLTDEQ 145
>gi|325286093|ref|YP_004261883.1| thymidine kinase [Cellulophaga lytica DSM 7489]
gi|324321547|gb|ADY29012.1| Thymidine kinase [Cellulophaga lytica DSM 7489]
Length = 214
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 85/193 (44%), Gaps = 49/193 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R Q+A + I + D RY E V +HD ++ T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAQFAKQKVEIFKPIVDTRYHEEMVVSHDANEIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ DV+GIDE QF + D+ + VC +
Sbjct: 77 AANIRLL--ADGCDVVGIDEAQFFD-----DEIVTVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ A+
Sbjct: 109 -------------------LANKGIRVLVAGLDMDFKGNPFGPMPALMATAEYVTKVHAI 149
Query: 331 CMSCFRDAAFTKR 343
C A ++ R
Sbjct: 150 CTRTGNLANYSFR 162
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 14/186 (7%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R Q+A + I + D RY E V +HD ++ T V A +L+
Sbjct: 30 ELIRRLKRAQFAKQKVEIFKPIVDTRYHEEMVVSHDANEIRSTPVPAAANIRLL--ADGC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+GIDE QFF D +V+ +AN G V+VA LD F+ F + +L+ AE V K+
Sbjct: 88 DVVGIDEAQFFDDEIVTVCNDLANKGIRVLVAGLDMDFKGNPFGPMPALMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFT-KRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR 191
A+C A ++ ++ + V+LG TE + R Y Y+ M+ K
Sbjct: 148 AICTRTGNLANYSFRKSNNDNLVMLG------ETEEYEPLSRAAY--YKAMLKEKVKTID 199
Query: 192 YDTEKV 197
D E++
Sbjct: 200 VDAEQI 205
>gi|374854978|dbj|BAL57847.1| thymidine kinase [uncultured Bacteroidetes bacterium]
Length = 192
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 30 RCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFF-PDVV 88
R + + D RY + +HDQ L A + + + + VIGIDE QFF P +V
Sbjct: 40 RVRLFKPETDTRYHPTAIVSHDQTSLEAQPVPNSDAIYLLSSEAHVIGIDEAQFFDPGIV 99
Query: 89 SFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
A +AN GK V++A LD + F + L+ +AE V KL AVC+ A F+ R
Sbjct: 100 EVANRLANEGKRVIIAGLDMDYLGRPFGPMPYLMAIAEFVTKLHAVCVYTGGLAHFSHRK 159
Query: 149 GQEKEVIL 156
E +V+L
Sbjct: 160 KPEGDVVL 167
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR A R + + D RY + +HDQ L A
Sbjct: 13 EVICGGMFSGKTEELLRRVRRALLAGQRVRLFKPETDTRYHPTAIVSHDQTSLEAQPVPN 72
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + + + VIGIDE QF +
Sbjct: 73 SDAIYLLSSEAHVIGIDEAQFFD------------------------------------- 95
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
P +V A +AN GK V++A LD + F + L+ +AE V KL AVC+
Sbjct: 96 --------PGIVEVANRLANEGKRVIIAGLDMDYLGRPFGPMPYLMAIAEFVTKLHAVCV 147
Query: 333 SCFRDAAFTKRIGQEKEV 350
A F+ R E +V
Sbjct: 148 YTGGLAHFSHRKKPEGDV 165
>gi|385803193|ref|YP_005839593.1| thymidine kinase [Haloquadratum walsbyi C23]
gi|339728685|emb|CCC39846.1| thymidine kinase [Haloquadratum walsbyi C23]
Length = 225
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT EL+RR+RR + A + + A DDRY V +H ++ A
Sbjct: 11 EVVTGSMFSGKTEELLRRLRRAEIAGQSIAVFKPAVDDRYGETTVGSHVGRQWEAA---- 66
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++P+ G D + + + +C +P + + + ++
Sbjct: 67 ---VVPNE------GEDIWNIKDELSKKKQNHRTTTQCRSGDG--TNNPGGVIPSNDDSV 115
Query: 273 NVPPPPE----FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
+V E ++VS ES+AN G VVV+ D T++ F + L+ +AE V+KL
Sbjct: 116 DVVAIDEANFFSTELVSVCESLANDGYRVVVSGTDQTYRGEPFEPLPQLMAVAEYVDKLQ 175
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRIE 353
A+C C A +R+ + I+
Sbjct: 176 AICTQCGEPATRNQRLVDDSPAHID 200
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV-----------ELNK 65
RR+RR + A + + A DDRY V +H ++ A EL+K
Sbjct: 25 LLRRLRRAEIAGQSIAVFKPAVDDRYGETTVGSHVGRQWEAAVVPNEGEDIWNIKDELSK 84
Query: 66 ----------------------LIPHTKD-IDVIGIDEGQFFP-DVVSFAESMANAGKIV 101
+IP D +DV+ IDE FF ++VS ES+AN G V
Sbjct: 85 KKQNHRTTTQCRSGDGTNNPGGVIPSNDDSVDVVAIDEANFFSTELVSVCESLANDGYRV 144
Query: 102 VVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
VV+ D T++ F + L+ +AE V+KL A+C C A +R+
Sbjct: 145 VVSGTDQTYRGEPFEPLPQLMAVAEYVDKLQAICTQCGEPATRNQRL 191
>gi|452973699|gb|EME73521.1| thymidine kinase [Bacillus sonorensis L12]
Length = 194
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R +A + + A D+RY + + +H+ + S
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATFAKQEVKVFKPAIDNRYSDDSIVSHNGTAIVCHSITS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVIG+DE QF + +T+ + A
Sbjct: 71 PKEIFEHISEKTDVIGVDEVQFFD---------------------------ETIIDTLTA 103
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
L A+ G V+ A LD F+ F + L+ LAE V KL AVC
Sbjct: 104 L------------------ADQGYRVIAAGLDQDFRGEPFGVVPDLMALAETVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR++R +A + + A D+RY + + +H+ + S ++ H ++ DVIG
Sbjct: 27 RRVKRATFAKQEVKVFKPAIDNRYSDDSIVSHNGTAIVCHSITSPKEIFEHISEKTDVIG 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
+DE QFF + ++ ++A+ G V+ A LD F+ F + L+ LAE V KL AVC
Sbjct: 87 VDEVQFFDETIIDTLTALADQGYRVIAAGLDQDFRGEPFGVVPDLMALAETVTKLQAVCS 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158
>gi|116622304|ref|YP_824460.1| thymidine kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116225466|gb|ABJ84175.1| Thymidine kinase [Candidatus Solibacter usitatus Ellin6076]
Length = 205
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+ ELIRR+RR A R + + D+RY +++ +H ++ + +
Sbjct: 12 EVICGPMFSGKSEELIRRLRRAMIARKRVEVFKPIIDNRYSDDEIVSHGDLRMKSQVVKD 71
Query: 213 LNKLIPHTKDID----VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
++ T+ ID V+GIDE F+
Sbjct: 72 AEEI---TRRIDWRSEVVGIDEANFMG--------------------------------- 95
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
P +V A+ +A++GK V+++ LD + F I L+ AE + K
Sbjct: 96 ------------PQLVDVAQRLADSGKQVIISGLDTDYLGRPFAPIPDLLAHAESITKTL 143
Query: 329 AVCMSCFRDAAFTKRI 344
A+C+ C A T+R+
Sbjct: 144 AICVRCGNPAKHTQRL 159
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDID- 74
RR+RR A R + + D+RY +++ +H ++ + + ++ T+ ID
Sbjct: 25 ELIRRLRRAMIARKRVEVFKPIIDNRYSDDEIVSHGDLRMKSQVVKDAEEI---TRRIDW 81
Query: 75 ---VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
V+GIDE F P +V A+ +A++GK V+++ LD + F I L+ AE + K
Sbjct: 82 RSEVVGIDEANFMGPQLVDVAQRLADSGKQVIISGLDTDYLGRPFAPIPDLLAHAESITK 141
Query: 131 LTAVCMSCFRDAAFTKRI-GQEKEVILG 157
A+C+ C A T+R+ G E +++G
Sbjct: 142 TLAICVRCGNPAKHTQRLRGSEDLIVVG 169
>gi|374326648|ref|YP_005084848.1| thymidine kinase [Pyrobaculum sp. 1860]
gi|356641917|gb|AET32596.1| Thymidine kinase [Pyrobaculum sp. 1860]
Length = 192
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 50/195 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV----S 209
VI+GPMF+GKTTELIRR+ R+ A R ++ + + D RYD KV+ H+ + AV S
Sbjct: 11 VIVGPMFAGKTTELIRRVERHVIAGRRAVVFKPSIDSRYDASKVAAHNGLRFGAVVVPPS 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ + + DV+ +DE QF
Sbjct: 71 EEGVEAIGKMGVEYDVVAVDEIQFF----------------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
P + +V++ S+AN G++V+ A L+ F+ F ++ A+ V LTA
Sbjct: 96 -------PVQLAEVLN---SLAN-GRVVIAAGLNLDFRGEPFETTARVMAYADRVISLTA 144
Query: 330 VCMSCFRDAAFTKRI 344
VC C R A T+R+
Sbjct: 145 VCKVCGRPATRTQRL 159
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+ R+ A R ++ + + D RYD KVA H+ + AV S + + +
Sbjct: 24 LIRRVERHVIAGRRAVVFKPSIDSRYDASKVAAHNGLRFGAVVVPPSEEGVEAIGKMGVE 83
Query: 73 IDVIGIDEGQFFPDVVSFAE---SMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
DV+ +DE QFFP V AE S+AN G++V+ A L+ F+ F ++ A+ V
Sbjct: 84 YDVVAVDEIQFFP--VQLAEVLNSLAN-GRVVIAAGLNLDFRGEPFETTARVMAYADRVI 140
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTAVC C R A T+R+
Sbjct: 141 SLTAVCKVCGRPATRTQRL 159
>gi|321313256|ref|YP_004205543.1| thymidine kinase [Bacillus subtilis BSn5]
gi|320019530|gb|ADV94516.1| thymidine kinase [Bacillus subtilis BSn5]
Length = 195
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D+RY V +H+ +T+ +
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEASVVSHNGTSMTSYAISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DVI +DE QF +
Sbjct: 71 AADIWDHISESTDVIAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V S+A+ G V+ A LD F+ F + +++ +AE V KL AVC
Sbjct: 95 ---------QEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + D+RY V +H+ +T+ + + H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVRVFKPVIDNRYSEASVVSHNGTSMTSYAISSAADIWDHISESTDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF ++V S+A+ G V+ A LD F+ F + +++ +AE V KL AV
Sbjct: 85 IAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|429506999|ref|YP_007188183.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429488589|gb|AFZ92513.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 194
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISESTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ S+A+ G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 97 -----------IIGDLSSLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVMKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISSSAEIWDHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ S+A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFGESIIGDLSSLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVMKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|317122072|ref|YP_004102075.1| thymidine kinase [Thermaerobacter marianensis DSM 12885]
gi|315592052|gb|ADU51348.1| Thymidine kinase [Thermaerobacter marianensis DSM 12885]
Length = 266
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR++R + A + ++ + D RY + V++HD + L A
Sbjct: 6 EVITGGMFSGKTEELLRRVQRARIARRQVLLCKPDLDHRYRRDAVASHDGRDLQAAVVPA 65
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E + DV+GIDE QF
Sbjct: 66 GRPEELLALARAARADVVGIDEAQFFA--------------------------------- 92
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
P +V + G+ V+V+ LD F R F + L+ +A+ V KL
Sbjct: 93 ------------PGIVPTVLELVAEGRRVIVSGLDMDFARRPFGPMPELMAVADEVVKLK 140
Query: 329 AVCMSCFRDAAFTKRI 344
A+C+ C A FT+R+
Sbjct: 141 AICVVCGEPATFTQRL 156
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTK 71
RR++R + A + ++ + D RY + VA+HD + L A E +
Sbjct: 19 ELLRRVQRARIARRQVLLCKPDLDHRYRRDAVASHDGRDLQAAVVPAGRPEELLALARAA 78
Query: 72 DIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
DV+GIDE QFF P +V + G+ V+V+ LD F R F + L+ +A+ V K
Sbjct: 79 RADVVGIDEAQFFAPGIVPTVLELVAEGRRVIVSGLDMDFARRPFGPMPELMAVADEVVK 138
Query: 131 LTAVCMSCFRDAAFTKRI 148
L A+C+ C A FT+R+
Sbjct: 139 LKAICVVCGEPATFTQRL 156
>gi|310659439|ref|YP_003937160.1| Thymidine kinase [[Clostridium] sticklandii]
gi|308826217|emb|CBH22255.1| Thymidine kinase [[Clostridium] sticklandii]
Length = 191
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 50/202 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
E ++GPM+SGK+ ELIRR++R + A ++ + D+RY E V +H + A++
Sbjct: 11 EAVVGPMYSGKSEELIRRLKRAKIAKQEVIVFKPCIDNRYSKEDVVSHSGISIRAIAINH 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E++K I T + V+GIDE QF +
Sbjct: 71 TEEIHKYI--TGETQVVGIDEVQFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+V A +A+ G V+ A LD F+ F + L+ AE V+KL A
Sbjct: 95 -----------EGIVDVALELADKGIRVIAAGLDLDFKAEPFGPVPELLARAEFVDKLQA 143
Query: 330 VCMSCFRDAAFTKRIGQEKEVR 351
VC+ C A T+R+ ++ R
Sbjct: 144 VCVKCGAPATRTQRLINKEPAR 165
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDI 73
RR++R + A ++ + D+RY E V +H + A++ E++K I T +
Sbjct: 25 LIRRLKRAKIAKQEVIVFKPCIDNRYSKEDVVSHSGISIRAIAINHTEEIHKYI--TGET 82
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
V+GIDE QFF + +V A +A+ G V+ A LD F+ F + L+ AE V+KL
Sbjct: 83 QVVGIDEVQFFDEGIVDVALELADKGIRVIAAGLDLDFKAEPFGPVPELLARAEFVDKLQ 142
Query: 133 AVCMSCFRDAAFTKRI 148
AVC+ C A T+R+
Sbjct: 143 AVCVKCGAPATRTQRL 158
>gi|380303176|ref|ZP_09852869.1| thymidine kinase [Brachybacterium squillarum M-6-3]
Length = 179
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATH--DQQKLTAVSAVE-LNKLIPHTKDI 73
RR+RR A +++ +A DDRY E +ATH D A S VE L L+ D
Sbjct: 9 LLRRVRRAALAGIDTLVLTHAFDDRY-AEGIATHTGDVMAAPAASDVEGLRALLAEHPDA 67
Query: 74 DVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
VI +DE QFF ++ + + G V+VA L TF F + L+ LA+ V +L+
Sbjct: 68 RVIALDEAQFFGAGLLPVVAELLDRGATVIVAGLAVTFDAEPFPPLPELMALADEVLRLS 127
Query: 133 AVCMSCFRDAAFTKRI 148
AVC C RDA +R+
Sbjct: 128 AVCAVCGRDAPLHQRL 143
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 78/189 (41%), Gaps = 49/189 (25%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTH--DQQKLTAVSAVE-LNK 215
MF+GK+ EL+RR+RR A +++ +A DDRY E ++TH D A S VE L
Sbjct: 1 MFAGKSEELLRRVRRAALAGIDTLVLTHAFDDRY-AEGIATHTGDVMAAPAASDVEGLRA 59
Query: 216 LIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
L+ D VI +DE QF
Sbjct: 60 LLAEHPDARVIALDEAQFFGA--------------------------------------- 80
Query: 276 PPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 335
++ + + G V+VA L TF F + L+ LA+ V +L+AVC C
Sbjct: 81 ------GLLPVVAELLDRGATVIVAGLAVTFDAEPFPPLPELMALADEVLRLSAVCAVCG 134
Query: 336 RDAAFTKRI 344
RDA +R+
Sbjct: 135 RDAPLHQRL 143
>gi|363542658|ref|ZP_09312241.1| thymidine kinase [Mycoplasma ovipneumoniae SC01]
Length = 184
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 49/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQ--KLTAVS 209
EVI GPMFSGK+ ELI+RI+ YAN + ++++ D+R+ D E VS + +A +
Sbjct: 11 EVITGPMFSGKSDELIKRIKILTYANIKILVIKPLIDNRFSDCEIVSRSGLRIPTFSAKT 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ L K I IDE QF
Sbjct: 71 TQEIKDLFAKDK-YGAIAIDEIQFFS---------------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D++ F + +AN G V+V+ LD F+R F + +L+ +AE V KL A
Sbjct: 96 -----------EDIIPFLDKIANKGIRVIVSGLDQDFRRKPFGVLPNLMAIAENVTKLQA 144
Query: 330 VCMSCFRDAAFTKRI 344
VC C R A + R+
Sbjct: 145 VCTICKRAATTSARL 159
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSA---VELNKLIPHTKD 72
+RI+ YAN + ++++ D+R+ ++ + ++ SA E+ L K
Sbjct: 24 ELIKRIKILTYANIKILVIKPLIDNRFSDCEIVSRSGLRIPTFSAKTTQEIKDLFAKDK- 82
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
I IDE QFF D++ F + +AN G V+V+ LD F+R F + +L+ +AE V KL
Sbjct: 83 YGAIAIDEIQFFSEDIIPFLDKIANKGIRVIVSGLDQDFRRKPFGVLPNLMAIAENVTKL 142
Query: 132 TAVCMSCFRDAAFTKR-IGQEKEVILG 157
AVC C R A + R + EK+ ++G
Sbjct: 143 QAVCTICKRAATTSARLVKSEKQNLIG 169
>gi|332880834|ref|ZP_08448505.1| thymidine kinase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357046990|ref|ZP_09108604.1| thymidine kinase [Paraprevotella clara YIT 11840]
gi|332681217|gb|EGJ54143.1| thymidine kinase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355530085|gb|EHG99503.1| thymidine kinase [Paraprevotella clara YIT 11840]
Length = 229
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 46/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A I + + D RY + V +H+ + +
Sbjct: 47 EVICGSMFSGKTEELIRRLKRAEFARQSVEIFKPSIDTRYAEQDVVSHEGNSIPSTPVDS 106
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ D DV+GIDE QF + + + VC E
Sbjct: 107 SASILLLGSDTDVVGIDEAQFFD-----ENLIDVCNE----------------------- 138
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 139 -----------------LANRGTRVIVAGLDLDFKGVPFGPMPGLCAVADEVTKVHAICV 181
Query: 333 SCFRDAAFTKR-IGQEKEV 350
C A + R + EK V
Sbjct: 182 RCGALAYVSHRTVDDEKRV 200
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A I + + D RY + V +H+ + + ++ D DV+GI
Sbjct: 63 RRLKRAEFARQSVEIFKPSIDTRYAEQDVVSHEGNSIPSTPVDSSASILLLGSDTDVVGI 122
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 123 DEAQFFDENLIDVCNELANRGTRVIVAGLDLDFKGVPFGPMPGLCAVADEVTKVHAICVR 182
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + EK V+LG
Sbjct: 183 CGALAYVSHRTVDDEKRVLLG 203
>gi|451927588|gb|AGF85466.1| thymidine kinase-like protein [Moumouvirus goulette]
Length = 206
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 58/201 (28%)
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYD-----TEKVSTHDQQKLTAVS 209
I+GPMFSGKTTE IR I R + A +C+I+++ +D+R++ + V TH++ K
Sbjct: 6 IIGPMFSGKTTEFIRLIERKKLAGKKCLIIKHLQDNRFEEIDAKEKHVITHNKIKYKNCD 65
Query: 210 AVELNKLIPH------TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
V N L+ + D++G++EG F
Sbjct: 66 IVYNNDLMNEKFLEYVMINYDIVGVEEGFF------------------------------ 95
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
F ++ F +AN V+V+ +D ++++ +I LI ++E
Sbjct: 96 ----------------FNNLAIFCNYLANENIEVIVSTIDSSYKQEIPQEIGKLIAISEN 139
Query: 324 VEKLTAVCMSCFR-DAAFTKR 343
+ KL AVCM C DA+FT R
Sbjct: 140 LIKLKAVCMQCKNTDASFTIR 160
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 85/154 (55%), Gaps = 13/154 (8%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDT-----EKVATHDQQKLTAVSAVELNKLIPH-- 69
F R I R + A +C+I+++ +D+R++ + V TH++ K V N L+
Sbjct: 18 FIRLIERKKLAGKKCLIIKHLQDNRFEEIDAKEKHVITHNKIKYKNCDIVYNNDLMNEKF 77
Query: 70 ----TKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLA 125
+ D++G++EG FF ++ F +AN V+V+ +D ++++ +I LI ++
Sbjct: 78 LEYVMINYDIVGVEEGFFFNNLAIFCNYLANENIEVIVSTIDSSYKQEIPQEIGKLIAIS 137
Query: 126 ECVEKLTAVCMSCFR-DAAFTKR-IGQEKEVILG 157
E + KL AVCM C DA+FT R E+++++G
Sbjct: 138 ENLIKLKAVCMQCKNTDASFTIRTTDDEQDILIG 171
>gi|110667749|ref|YP_657560.1| thymidine kinase [Haloquadratum walsbyi DSM 16790]
gi|121684867|sp|Q18J88.1|KITH_HALWD RecName: Full=Thymidine kinase
gi|109625496|emb|CAJ51923.1| thymidine kinase [Haloquadratum walsbyi DSM 16790]
Length = 225
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 19/205 (9%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT EL+RR+RR + A + + A DDRY V +H ++ A
Sbjct: 11 EVVTGSMFSGKTEELLRRLRRAEIAGQSIAVFKPAVDDRYGETTVGSHVGRQWEAA---- 66
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++P+ G D + + +C +P + + + ++
Sbjct: 67 ---VVPNE------GEDIWNIKHELSKKKQNHRTTTQCRSGDG--TNNPGGVIPSNDDSV 115
Query: 273 NVPPPPE----FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
+V E ++VS ES+AN G VVV+ D T++ F + L+ +AE V+KL
Sbjct: 116 DVVAIDEANFFSTELVSVCESLANDGYRVVVSGTDQTYRGEPFEPLPQLMAVAEYVDKLQ 175
Query: 329 AVCMSCFRDAAFTKRIGQEKEVRIE 353
A+C C A +R+ + I+
Sbjct: 176 AICTQCGEPATRNQRLVDDSPAHID 200
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAV-----------ELNK 65
RR+RR + A + + A DDRY V +H ++ A EL+K
Sbjct: 25 LLRRLRRAEIAGQSIAVFKPAVDDRYGETTVGSHVGRQWEAAVVPNEGEDIWNIKHELSK 84
Query: 66 ----------------------LIPHTKD-IDVIGIDEGQFFP-DVVSFAESMANAGKIV 101
+IP D +DV+ IDE FF ++VS ES+AN G V
Sbjct: 85 KKQNHRTTTQCRSGDGTNNPGGVIPSNDDSVDVVAIDEANFFSTELVSVCESLANDGYRV 144
Query: 102 VVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
VV+ D T++ F + L+ +AE V+KL A+C C A +R+
Sbjct: 145 VVSGTDQTYRGEPFEPLPQLMAVAEYVDKLQAICTQCGEPATRNQRL 191
>gi|408673836|ref|YP_006873584.1| Thymidine kinase [Emticicia oligotrophica DSM 17448]
gi|387855460|gb|AFK03557.1| Thymidine kinase [Emticicia oligotrophica DSM 17448]
Length = 191
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R + A + I + + D RY + +H+Q + + +++ T D +V+GI
Sbjct: 35 RRLKRAKIAKQKVEIFKPSIDVRYHEVDIVSHNQTAIRSTPVHTSEEILLMTTDCEVVGI 94
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + +++ +A GK V+VA LD + F + +L+ +AE V K+ A+C+
Sbjct: 95 DEAQFFDNGIIAVVNKLAENGKRVIVAGLDMDSRGIPFGPMPALMSIAEYVTKVHAICVV 154
Query: 138 CFRDAAFT-KRIGQEKEVILG 157
C A ++ +++ E++V+LG
Sbjct: 155 CGDIANYSYRKVPNEQQVMLG 175
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EV+ G MFSGKT ELIRR++R + A + I + + D RY + +H+Q + +
Sbjct: 19 EVVCGSMFSGKTEELIRRLKRAKIAKQKVEIFKPSIDVRYHEVDIVSHNQTAIRSTPVHT 78
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ T D +V+GIDE QF +
Sbjct: 79 SEEILLMTTDCEVVGIDEAQFFD------------------------------------- 101
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+++ +A GK V+VA LD + F + +L+ +AE V K+ A+C+
Sbjct: 102 --------NGIIAVVNKLAENGKRVIVAGLDMDSRGIPFGPMPALMSIAEYVTKVHAICV 153
Query: 333 SCFRDAAFT-KRIGQEKEVRI 352
C A ++ +++ E++V +
Sbjct: 154 VCGDIANYSYRKVPNEQQVML 174
>gi|384177352|ref|YP_005558737.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|386760359|ref|YP_006233576.1| thymidine kinase [Bacillus sp. JS]
gi|428281333|ref|YP_005563068.1| thymidine kinase [Bacillus subtilis subsp. natto BEST195]
gi|430758228|ref|YP_007207776.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. BSP1]
gi|449096159|ref|YP_007428650.1| thymidine kinase [Bacillus subtilis XF-1]
gi|291486290|dbj|BAI87365.1| thymidine kinase [Bacillus subtilis subsp. natto BEST195]
gi|349596576|gb|AEP92763.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|384933642|gb|AFI30320.1| thymidine kinase [Bacillus sp. JS]
gi|430022748|gb|AGA23354.1| Thymidine kinase [Bacillus subtilis subsp. subtilis str. BSP1]
gi|449030074|gb|AGE65313.1| thymidine kinase [Bacillus subtilis XF-1]
Length = 195
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D+RY V +H+ +T+ +
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DVI +DE QF +
Sbjct: 71 AADIWDHISESTDVIAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V S+A+ G V+ A LD F+ F + +++ +AE V KL AVC
Sbjct: 95 ---------QEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + D+RY V +H+ +T+ + + H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF ++V S+A+ G V+ A LD F+ F + +++ +AE V KL AV
Sbjct: 85 IAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|330998170|ref|ZP_08321996.1| thymidine kinase [Paraprevotella xylaniphila YIT 11841]
gi|329568862|gb|EGG50660.1| thymidine kinase [Paraprevotella xylaniphila YIT 11841]
Length = 200
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 46/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A I + + D RY + V +H+ + +
Sbjct: 18 EVICGSMFSGKTEELIRRLKRAEFARQSVEIFKPSIDTRYAEQDVVSHEGNSIPSTPVDS 77
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ D DV+GIDE QF + + + VC E
Sbjct: 78 SASILLLGSDTDVVGIDEAQFFD-----ENLIDVCNE----------------------- 109
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 110 -----------------LANRGTRVIVAGLDLDFKGIPFGPMPGLCAVADEVTKVHAICV 152
Query: 333 SCFRDAAFTKR-IGQEKEV 350
C A + R + EK V
Sbjct: 153 RCGALAYVSHRTVDNEKRV 171
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A I + + D RY + V +H+ + + ++ D DV+GI
Sbjct: 34 RRLKRAEFARQSVEIFKPSIDTRYAEQDVVSHEGNSIPSTPVDSSASILLLGSDTDVVGI 93
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +++ +AN G V+VA LD F+ F + L +A+ V K+ A+C+
Sbjct: 94 DEAQFFDENLIDVCNELANRGTRVIVAGLDLDFKGIPFGPMPGLCAVADEVTKVHAICVR 153
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A + R + EK V+LG
Sbjct: 154 CGALAYVSHRTVDNEKRVLLG 174
>gi|257066540|ref|YP_003152796.1| thymidine kinase [Anaerococcus prevotii DSM 20548]
gi|256798420|gb|ACV29075.1| Thymidine kinase [Anaerococcus prevotii DSM 20548]
Length = 201
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH--TKDID 74
R + R + ANY+ + + + D R D K+ +HD +L A L +++ + KDID
Sbjct: 22 LWRELYRMRIANYKIVAFKPSIDSRDDERKIVSHDNLELDAHKVENLREILAYAKNKDID 81
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
IGIDE QFFP+ V+ + +VV+ LD ++ F I ++P+A+ + K
Sbjct: 82 CIGIDELQFFPNDPGEVIDIFNELMAMKITIVVSGLDMDYKTQPFEIIKEIMPIADELVK 141
Query: 131 LTAVCMSCFRDA-AFTKRIGQEKEVILG 157
A+C SC DA A ++ E + +G
Sbjct: 142 HHAICASCGEDAWASYRKTSDESRIQIG 169
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 45/199 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKTT L R + R + ANY+ + + + D R D K+ +HD +L A L ++
Sbjct: 12 GSMFSGKTTSLWRELYRMRIANYKIVAFKPSIDSRDDERKIVSHDNLELDAHKVENLREI 71
Query: 217 IPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ + KDID IGIDE QF N+
Sbjct: 72 LAYAKNKDIDCIGIDELQF-------------------------------FPND------ 94
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
P E D+ F E MA +VV+ LD ++ F I ++P+A+ + K A+C SC
Sbjct: 95 --PGEVIDI--FNELMA-MKITIVVSGLDMDYKTQPFEIIKEIMPIADELVKHHAICASC 149
Query: 335 FRDA-AFTKRIGQEKEVRI 352
DA A ++ E ++I
Sbjct: 150 GEDAWASYRKTSDESRIQI 168
>gi|408491243|ref|YP_006867612.1| thymidine kinase [Psychroflexus torquis ATCC 700755]
gi|408468518|gb|AFU68862.1| thymidine kinase [Psychroflexus torquis ATCC 700755]
Length = 212
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 49/200 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT ELIRR++R ++A + I + D RYD V +HD+ + T V A
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPQIDRRYDDTDVVSHDENSIRSTPVPA 76
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L+ +V+GIDE QF + D+ ++VC +
Sbjct: 77 AANIRLL--ADGCEVVGIDEAQFFD-----DEIISVCND--------------------- 108
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+AN G V+VA LD F+ F + +L+ AE V K+ AV
Sbjct: 109 -------------------LANRGVRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVHAV 149
Query: 331 CMSCFRDAAFTKRIGQEKEV 350
C A ++ R ++++
Sbjct: 150 CTRTGNLAQYSFRKSSKEDL 169
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVELNKLIPHTKDI 73
RR++R ++A + I + D RYD V +HD+ + T V A +L+
Sbjct: 30 ELIRRLKRAKFAKQKVEIFKPQIDRRYDDTDVVSHDENSIRSTPVPAAANIRLL--ADGC 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+V+GIDE QFF D ++S +AN G V+VA LD F+ F + +L+ AE V K+
Sbjct: 88 EVVGIDEAQFFDDEIISVCNDLANRGVRVIVAGLDMDFKGNPFGPMPNLMATAEYVTKVH 147
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
AVC A ++ R +++++L
Sbjct: 148 AVCTRTGNLAQYSFRKSSKEDLVL 171
>gi|169351468|ref|ZP_02868406.1| hypothetical protein CLOSPI_02248 [Clostridium spiroforme DSM 1552]
gi|169291690|gb|EDS73823.1| thymidine kinase [Clostridium spiroforme DSM 1552]
Length = 196
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 86/208 (41%), Gaps = 50/208 (24%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--- 205
G EVI G MFSGKT ELIRRI YA ++ + D+RY ++ +H ++
Sbjct: 7 GGWLEVICGCMFSGKTEELIRRINVLSYAKKNIVVFKPKVDNRYSDTEIVSHSGSRVPCK 66
Query: 206 TAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
A ++ KL+ D++V+ IDE QF +
Sbjct: 67 IVEKAQDILKLV--NDDVEVVAIDEIQFFD------------------------------ 94
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
D+V E +A+ G V+VA LD F+ F + L+ AE V
Sbjct: 95 ---------------KDIVDVCEYLADKGIRVIVAGLDKDFRGESFGVMPELLTRAEFVT 139
Query: 326 KLTAVCMSCFRDAAFTKRIGQEKEVRIE 353
KLTAVC C A T+R+ K E
Sbjct: 140 KLTAVCAKCGAPATRTQRLVDGKPASFE 167
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL---TAVSAVELNKLIPHTKDIDV 75
RRI YA ++ + D+RY ++ +H ++ A ++ KL+ D++V
Sbjct: 27 RRINVLSYAKKNIVVFKPKVDNRYSDTEIVSHSGSRVPCKIVEKAQDILKLV--NDDVEV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE QFF D+V E +A+ G V+VA LD F+ F + L+ AE V KLTAV
Sbjct: 85 VAIDEIQFFDKDIVDVCEYLADKGIRVIVAGLDKDFRGESFGVMPELLTRAEFVTKLTAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A T+R+
Sbjct: 145 CAKCGAPATRTQRL 158
>gi|313126161|ref|YP_004036431.1| thymidine kinase [Halogeometricum borinquense DSM 11551]
gi|448286002|ref|ZP_21477238.1| thymidine kinase [Halogeometricum borinquense DSM 11551]
gi|312292526|gb|ADQ66986.1| thymidine kinase [Halogeometricum borinquense DSM 11551]
gi|445575301|gb|ELY29777.1| thymidine kinase [Halogeometricum borinquense DSM 11551]
Length = 195
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD----QQKLTAV 208
EVI G MFSGKT EL+RR+RR + A + + DDRY V +H + + A
Sbjct: 11 EVITGSMFSGKTEELLRRLRRAEIAGQEVAVFKPDIDDRYGETTVGSHAGSEWEAHVVAS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E+ L+ DV+ IDE F
Sbjct: 71 DGEEMWNLLDKLNGEDVVAIDEANFFSA-------------------------------- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E +A G+ V+V+ D TF+ F+ + L+ +AE V+KL
Sbjct: 99 -------------ELVDICEHLAADGRRVLVSGTDQTFRGEPFDPVPQLMAMAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A+ +R+
Sbjct: 146 AICSVCGEPASRNQRL 161
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD----QQKLTAVSAVELNKLIPHTKD 72
RR+RR + A + + DDRY V +H + + A E+ L+
Sbjct: 25 LLRRLRRAEIAGQEVAVFKPDIDDRYGETTVGSHAGSEWEAHVVASDGEEMWNLLDKLNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V E +A G+ V+V+ D TF+ F+ + L+ +AE V+KL
Sbjct: 85 EDVVAIDEANFFSAELVDICEHLAADGRRVLVSGTDQTFRGEPFDPVPQLMAMAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 145 QAICSVCGEPASRNQRL 161
>gi|418031065|ref|ZP_12669550.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351472124|gb|EHA32237.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 192
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D+RY V +H+ +T+ +
Sbjct: 8 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISS 67
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DV+ +DE QF +
Sbjct: 68 AADIWDHISESTDVVAVDEVQFFD------------------------------------ 91
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V S+A+ G V+ A LD F+ F + +++ +AE V KL AVC
Sbjct: 92 ---------QEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVC 142
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 143 SVCGSPASRTQRL 155
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + D+RY V +H+ +T+ + + H ++ DV
Sbjct: 22 LIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDV 81
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ +DE QFF ++V S+A+ G V+ A LD F+ F + +++ +AE V KL AV
Sbjct: 82 VAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAV 141
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 142 CSVCGSPASRTQRL 155
>gi|16080759|ref|NP_391587.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221311667|ref|ZP_03593514.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315995|ref|ZP_03597800.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221320906|ref|ZP_03602200.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221325190|ref|ZP_03606484.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. SMY]
gi|402777869|ref|YP_006631813.1| thymidine kinase [Bacillus subtilis QB928]
gi|452912629|ref|ZP_21961257.1| thymidine kinase [Bacillus subtilis MB73/2]
gi|729902|sp|Q03221.2|KITH_BACSU RecName: Full=Thymidine kinase
gi|405819|gb|AAA02902.1| thymidine kinase [Bacillus subtilis]
gi|853771|emb|CAA89879.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. 168]
gi|2636231|emb|CAB15723.1| thymidine kinase [Bacillus subtilis subsp. subtilis str. 168]
gi|402483048|gb|AFQ59557.1| Thymidine kinase [Bacillus subtilis QB928]
gi|407962549|dbj|BAM55789.1| thymidine kinase [Bacillus subtilis BEST7613]
gi|407966562|dbj|BAM59801.1| thymidine kinase [Bacillus subtilis BEST7003]
gi|452117657|gb|EME08051.1| thymidine kinase [Bacillus subtilis MB73/2]
Length = 195
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D+RY V +H+ +T+ +
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DV+ +DE QF +
Sbjct: 71 AADIWDHISESTDVVAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V S+A+ G V+ A LD F+ F + +++ +AE V KL AVC
Sbjct: 95 ---------QEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + D+RY V +H+ +T+ + + H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAISSAADIWDHISESTDV 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ +DE QFF ++V S+A+ G V+ A LD F+ F + +++ +AE V KL AV
Sbjct: 85 VAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|383788520|ref|YP_005473089.1| thymidine kinase [Caldisericum exile AZM16c01]
gi|381364157|dbj|BAL80986.1| thymidine kinase [Caldisericum exile AZM16c01]
Length = 193
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRRI+R + A + + + + D RY +V +H +K+ A+
Sbjct: 9 EVITGCMFSGKSEELIRRIKRAKIARQKVQVFKPSIDTRYSVVEVVSHAGEKVEAIPVSG 68
Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+L+ +D V+GIDE QF +
Sbjct: 69 TKELLEKVEEDTAVVGIDEAQFFD------------------------------------ 92
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+ ++ GK V+VA LD F+ F + ++ +A+ V KL A+C
Sbjct: 93 ---------KDITDALRRLSKLGKRVIVAGLDMDFRGEPFGPMPFIMAIADEVLKLHAIC 143
Query: 332 MSCFRDAAFTKRI 344
C +A T+R+
Sbjct: 144 TVCGEEATMTQRL 156
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDV 75
RRI+R + A + + + + D RY +V +H +K+ A+ +L+ + D V
Sbjct: 23 LIRRIKRAKIARQKVQVFKPSIDTRYSVVEVVSHAGEKVEAIPVSGTKELLEKVEEDTAV 82
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDE QFF D+ ++ GK V+VA LD F+ F + ++ +A+ V KL A+
Sbjct: 83 VGIDEAQFFDKDITDALRRLSKLGKRVIVAGLDMDFRGEPFGPMPFIMAIADEVLKLHAI 142
Query: 135 CMSCFRDAAFTKRI 148
C C +A T+R+
Sbjct: 143 CTVCGEEATMTQRL 156
>gi|417002172|ref|ZP_11941561.1| thymidine kinase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479313|gb|EGC82409.1| thymidine kinase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 207
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK--DID 74
R + R + A Y + + + D R D +K+ +HD +L A+ L ++ + K D+D
Sbjct: 27 LWRELYRMKIAKYNVVAFKPSIDSRDDEKKIVSHDNLELDAIKVENLKDILEYAKNNDLD 86
Query: 75 VIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
IGIDE QFFP+ V+ + + +VV+ LD + F I L+P+A+ + K
Sbjct: 87 SIGIDEVQFFPNDPDEVIDIFNKLMSMNITLVVSGLDMDYMTKPFEIIKELMPIADELVK 146
Query: 131 LTAVCMSCFRDAAFTKRIGQE 151
A+C SC DA + R E
Sbjct: 147 HHAICASCGEDAWASYRKSAE 167
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 48/209 (22%)
Query: 144 FTKRIGQEKEVIL--GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD 201
+ ++ Q+ +I+ G MFSGKTT L R + R + A Y + + + D R D +K+ +HD
Sbjct: 2 YRNKMKQQGRLIVHTGSMFSGKTTSLWRELYRMKIAKYNVVAFKPSIDSRDDEKKIVSHD 61
Query: 202 QQKLTAVSAVELNKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
+L A+ L ++ + K D+D IGIDE QF
Sbjct: 62 NLELDAIKVENLKDILEYAKNNDLDSIGIDEVQFF------------------------- 96
Query: 260 SPFKTLANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLI 318
P PD V+ + + +VV+ LD + F I L+
Sbjct: 97 ------------------PNDPDEVIDIFNKLMSMNITLVVSGLDMDYMTKPFEIIKELM 138
Query: 319 PLAECVEKLTAVCMSCFRDAAFTKRIGQE 347
P+A+ + K A+C SC DA + R E
Sbjct: 139 PIADELVKHHAICASCGEDAWASYRKSAE 167
>gi|219849943|ref|YP_002464376.1| thymidine kinase [Chloroflexus aggregans DSM 9485]
gi|254807840|sp|B8G6Y1.1|KITH_CHLAD RecName: Full=Thymidine kinase
gi|219544202|gb|ACL25940.1| Thymidine kinase [Chloroflexus aggregans DSM 9485]
Length = 193
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 42/196 (21%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI G M+SGKT ELIRR+R+ + A I D RY V++H +L A+
Sbjct: 7 GGRIEVICGCMYSGKTEELIRRMRQVRIARQSYRIFTPRMDTRYAEGHVASHSGSRLEAI 66
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ + +++ + +D+ V+ IDE + D + R C
Sbjct: 67 TVATMCEILAYARDVQVVAIDELHLFD-----DDPAEMVRGC------------------ 103
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
+ +A+ G V+VA LD ++ F ++ L+ LAE V+KL
Sbjct: 104 -------------------QVLADRGARVIVAGLDLNYRAEPFPAMMHLLALAEQVDKLY 144
Query: 329 AVCMSCFRDAAFTKRI 344
A+C+ C A ++R+
Sbjct: 145 AICVKCGAYATRSQRL 160
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+R+ + A I D RY VA+H +L A++ + +++ + +D+ V+ I
Sbjct: 27 RRMRQVRIARQSYRIFTPRMDTRYAEGHVASHSGSRLEAITVATMCEILAYARDVQVVAI 86
Query: 79 DEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
DE F D +V + +A+ G V+VA LD ++ F ++ L+ LAE V+KL A+
Sbjct: 87 DELHLFDDDPAEMVRGCQVLADRGARVIVAGLDLNYRAEPFPAMMHLLALAEQVDKLYAI 146
Query: 135 CMSCFRDAAFTKRI 148
C+ C A ++R+
Sbjct: 147 CVKCGAYATRSQRL 160
>gi|78042944|ref|YP_359441.1| thymidine kinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77995059|gb|ABB13958.1| thymidine kinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 183
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 47/199 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA--VSA 210
EVI GPMFSGK+ EL+RR R YA + + +A D+R+ +K+ + +L + V
Sbjct: 5 EVITGPMFSGKSEELVRRALRLMYAKKKVIAFHHALDNRFGHKKIVSRSGFELESYPVQN 64
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ KD D + +DE QF SD+ + C
Sbjct: 65 FAFEVIWDLAKDYDAVLVDEAQFF-----SDELVDTC----------------------- 96
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
LN + KIVVV+ LD F + L+ LA+ V+KL AV
Sbjct: 97 -LN----------------LRRRSKIVVVSGLDLDVYENPFGPMPKLLALADRVDKLKAV 139
Query: 331 CMSCFRDAAFTKRIGQEKE 349
C C +A + R+ EKE
Sbjct: 140 CFECGEEATISYRLSGEKE 158
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA--VSAVELNKLIPHTKDIDVI 76
RR R YA + + +A D+R+ +K+ + +L + V + KD D +
Sbjct: 21 RRALRLMYAKKKVIAFHHALDNRFGHKKIVSRSGFELESYPVQNFAFEVIWDLAKDYDAV 80
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
+DE QFF D +V ++ KIVVV+ LD F + L+ LA+ V+KL AVC
Sbjct: 81 LVDEAQFFSDELVDTCLNLRRRSKIVVVSGLDLDVYENPFGPMPKLLALADRVDKLKAVC 140
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
C +A + R+ EKE I+
Sbjct: 141 FECGEEATISYRLSGEKEQIV 161
>gi|329766950|ref|ZP_08258478.1| thymidine kinase [Gemella haemolysans M341]
gi|328837675|gb|EGF87300.1| thymidine kinase [Gemella haemolysans M341]
Length = 192
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MFSGK+ EL+RRI+R A + ++ + + D+RY+ VSTH+ +V+ +
Sbjct: 11 ECICGSMFSGKSEELLRRIKRGVIAKQKILLFKPSIDNRYEENMVSTHNGNSYESVNIDK 70
Query: 213 LNKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
++ + K D+IGIDE QF +
Sbjct: 71 AEQIYDYIIDKKYDIIGIDEVQFFD----------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+V +A+ G V+VA LD F+ F+ + ++ ++E V KL AV
Sbjct: 96 ----------EKIVEVINKLADDGIRVIVAGLDMDFKAEPFHPMPEIMAVSEMVTKLHAV 145
Query: 331 CMSCFRDAAFTKRI 344
C C ++A+ ++R+
Sbjct: 146 CNKCGKEASRSQRL 159
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDIDVI 76
RRI+R A + ++ + + D+RY+ V+TH+ +V+ + ++ + K D+I
Sbjct: 27 RRIKRGVIAKQKILLFKPSIDNRYEENMVSTHNGNSYESVNIDKAEQIYDYIIDKKYDII 86
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +V +A+ G V+VA LD F+ F+ + ++ ++E V KL AVC
Sbjct: 87 GIDEVQFFDEKIVEVINKLADDGIRVIVAGLDMDFKAEPFHPMPEIMAVSEMVTKLHAVC 146
Query: 136 MSCFRDAAFTKRI 148
C ++A+ ++R+
Sbjct: 147 NKCGKEASRSQRL 159
>gi|114566639|ref|YP_753793.1| thymidine kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337574|gb|ABI68422.1| Thymidine kinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 178
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 49/189 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPMF+GKTTEL+RR+ RY A ++ + D R +TE +T +Q+ + + +
Sbjct: 5 EIITGPMFAGKTTELMRRLERYTLAGNNVVLFKPHIDSRTETEIATTSVRQQFS-IPVLV 63
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
L+K P + V+ IDE QF
Sbjct: 64 LHK--PIGIEAAVVAIDEAQFFG------------------------------------- 84
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
E+ ++++ +S+ + GK V+++ LD R F + L+ +A+ V KLTAVC
Sbjct: 85 ------EW--ILTYVQSLKDQGKTVIISGLDMDAHRRPFGFMGQLMAIADSVSKLTAVC- 135
Query: 333 SCFRDAAFT 341
C DA +T
Sbjct: 136 RCGEDAVYT 144
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ RY A ++ + D R +TE T +Q+ + + + L+K P + V+ I
Sbjct: 21 RRLERYTLAGNNVVLFKPHIDSRTETEIATTSVRQQFS-IPVLVLHK--PIGIEAAVVAI 77
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + ++++ +S+ + GK V+++ LD R F + L+ +A+ V KLTAVC
Sbjct: 78 DEAQFFGEWILTYVQSLKDQGKTVIISGLDMDAHRRPFGFMGQLMAIADSVSKLTAVC-R 136
Query: 138 CFRDAAFT 145
C DA +T
Sbjct: 137 CGEDAVYT 144
>gi|373109040|ref|ZP_09523320.1| hypothetical protein HMPREF9712_00913 [Myroides odoratimimus CCUG
10230]
gi|423129290|ref|ZP_17116965.1| hypothetical protein HMPREF9714_00365 [Myroides odoratimimus CCUG
12901]
gi|423132953|ref|ZP_17120600.1| hypothetical protein HMPREF9715_00375 [Myroides odoratimimus CIP
101113]
gi|371645734|gb|EHO11256.1| hypothetical protein HMPREF9712_00913 [Myroides odoratimimus CCUG
10230]
gi|371649053|gb|EHO14535.1| hypothetical protein HMPREF9714_00365 [Myroides odoratimimus CCUG
12901]
gi|371649710|gb|EHO15187.1| hypothetical protein HMPREF9715_00375 [Myroides odoratimimus CIP
101113]
Length = 210
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RY E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPAIDTRYHDEFVVSHDSNEIRSTPVPS 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ DV+GIDE QF + ++ + VC +
Sbjct: 77 AAHIRLLADGCDVVGIDEAQFFD-----EEIVRVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN+G V+VA LD F+ F + L+ AE V K+ A+C
Sbjct: 109 -----------------LANSGIRVIVAGLDMDFKGNPFGPMPYLMATAEYVTKVHAICT 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
A ++ R +++
Sbjct: 152 RSGNLANYSFRKAASEDI 169
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY E V +HD ++ + + DV+GI
Sbjct: 33 RRLKRAKFAKQKVEIFKPAIDTRYHDEFVVSHDSNEIRSTPVPSAAHIRLLADGCDVVGI 92
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++V +AN+G V+VA LD F+ F + L+ AE V K+ A+C
Sbjct: 93 DEAQFFDEEIVRVCNDLANSGIRVIVAGLDMDFKGNPFGPMPYLMATAEYVTKVHAICTR 152
Query: 138 CFRDAAFTKRIGQEKEVIL 156
A ++ R +++++
Sbjct: 153 SGNLANYSFRKAASEDIVM 171
>gi|448612042|ref|ZP_21662472.1| thymidine kinase [Haloferax mucosum ATCC BAA-1512]
gi|445742803|gb|ELZ94297.1| thymidine kinase [Haloferax mucosum ATCC BAA-1512]
Length = 195
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR+RR + A + + DDRY V TH + A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDASVVPS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ +++ DV+ IDE F
Sbjct: 71 EGEGVWQIVEELNGEDVVAIDEANFFSA-------------------------------- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E +A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 99 -------------ELVDVCEQLAADGKRVVVSGTDQTFRAEPFDPVPQLMALAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTICGEPATRNQRL 161
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR + A + + DDRY V TH + A + +++
Sbjct: 25 LLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDASVVPSEGEGVWQIVEELNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V E +A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 85 EDVVAIDEANFFSAELVDVCEQLAADGKRVVVSGTDQTFRAEPFDPVPQLMALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTICGEPATRNQRL 161
>gi|423328564|ref|ZP_17306371.1| hypothetical protein HMPREF9711_01945 [Myroides odoratimimus CCUG
3837]
gi|404605000|gb|EKB04616.1| hypothetical protein HMPREF9711_01945 [Myroides odoratimimus CCUG
3837]
Length = 210
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 45/198 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR++R ++A + I + A D RY E V +HD ++ +
Sbjct: 17 EVICGSMFSGKTEELIRRLKRAKFAKQKVEIFKPAIDTRYHDEFVVSHDSNEIRSTPVPS 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ DV+GIDE QF + ++ + VC +
Sbjct: 77 AAHIRLLADGCDVVGIDEAQFFD-----EEIVRVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN+G V+VA LD F+ F + L+ AE V K+ A+C
Sbjct: 109 -----------------LANSGIRVIVAGLDMDFKGNPFGPMPYLMATAEYVTKVHAICT 151
Query: 333 SCFRDAAFTKRIGQEKEV 350
A ++ R +++
Sbjct: 152 RSGNLANYSFRKAASEDI 169
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R ++A + I + A D RY E V +HD ++ + + DV+GI
Sbjct: 33 RRLKRAKFAKQKVEIFKPAIDTRYHDEFVVSHDSNEIRSTPVPSAAHIRLLADGCDVVGI 92
Query: 79 DEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++V +AN+G V+VA LD F+ F + L+ AE V K+ A+C
Sbjct: 93 DEAQFFDEEIVRVCNDLANSGIRVIVAGLDMDFKGNPFGPMPYLMATAEYVTKVHAICTR 152
Query: 138 CFRDAAFTKRIGQEKEVIL 156
A ++ R +++++
Sbjct: 153 SGNLANYSFRKAASEDIVM 171
>gi|304440663|ref|ZP_07400547.1| thymidine kinase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304370850|gb|EFM24472.1| thymidine kinase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 195
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 44/189 (23%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L R ++R+ A Y+ + A D R ++++THD+ + AV + +
Sbjct: 13 GSMFSGKTSSLEREMKRFAIAGYKTCAFKPAMDTRDKKDRITTHDKTYIEAVMVDSVKDI 72
Query: 217 IPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ ++ +DV+GIDE QF +GG K
Sbjct: 73 VKFVEENPVDVVGIDEIQF---LGGERK-------------------------------- 97
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
+++ S+ GK VVVA LD F+ F + L+P+ + + K AVC+ C
Sbjct: 98 -------EILEDINSLLYDGKTVVVAGLDMDFEAHPFEIVKDLMPICDYITKHHAVCVKC 150
Query: 335 FRDAAFTKR 343
DA + R
Sbjct: 151 GSDAWVSHR 159
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 7/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--IDVI 76
R ++R+ A Y+ + A D R +++ THD+ + AV + ++ ++ +DV+
Sbjct: 25 REMKRFAIAGYKTCAFKPAMDTRDKKDRITTHDKTYIEAVMVDSVKDIVKFVEENPVDVV 84
Query: 77 GIDEGQFF----PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
GIDE QF +++ S+ GK VVVA LD F+ F + L+P+ + + K
Sbjct: 85 GIDEIQFLGGERKEILEDINSLLYDGKTVVVAGLDMDFEAHPFEIVKDLMPICDYITKHH 144
Query: 133 AVCMSCFRDAAFTKRIGQEKE-VILG 157
AVC+ C DA + R + + V++G
Sbjct: 145 AVCVKCGSDAWVSHRKSDDTQRVVIG 170
>gi|18313354|ref|NP_560021.1| thymidine kinase [Pyrobaculum aerophilum str. IM2]
gi|73920108|sp|Q8ZV53.1|KITH_PYRAE RecName: Full=Thymidine kinase
gi|18160882|gb|AAL64203.1| thymidine kinase [Pyrobaculum aerophilum str. IM2]
Length = 185
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 83/202 (41%), Gaps = 64/202 (31%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
VI+GPMF+GKTTELIRR+ RY A R ++ + + D RYD KV+ H+ K A
Sbjct: 4 VIVGPMFAGKTTELIRRVERYVIAGRRAIVFKPSLDVRYDASKVAAHNGLKFDAF----- 58
Query: 214 NKLIPHTKD-----------IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPF 262
+IP KD DV+ +DE QF V
Sbjct: 59 --VIPPDKDGVEIIRKMGAEYDVVAVDEIQFFPV-------------------------- 90
Query: 263 KTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
D+ +AN G+IV+ A L+ F+ F + A+
Sbjct: 91 -------------------DLADALNQLAN-GRIVIAAGLNLDFRGEPFETTARAMAFAD 130
Query: 323 CVEKLTAVCMSCFRDAAFTKRI 344
V L+AVC C + A T+R+
Sbjct: 131 RVISLSAVCKLCGKPATRTQRL 152
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 20/144 (13%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD---- 72
RR+ RY A R ++ + + D RYD KVA H+ K A +IP KD
Sbjct: 17 LIRRVERYVIAGRRAIVFKPSLDVRYDASKVAAHNGLKFDAF-------VIPPDKDGVEI 69
Query: 73 -------IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPL 124
DV+ +DE QFFP D+ +AN G+IV+ A L+ F+ F +
Sbjct: 70 IRKMGAEYDVVAVDEIQFFPVDLADALNQLAN-GRIVIAAGLNLDFRGEPFETTARAMAF 128
Query: 125 AECVEKLTAVCMSCFRDAAFTKRI 148
A+ V L+AVC C + A T+R+
Sbjct: 129 ADRVISLSAVCKLCGKPATRTQRL 152
>gi|19699027|gb|AAL91131.1| thymidine kinase [Mycoplasma gallisepticum]
Length = 224
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 49/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E I GPMF+GKT ELIR+I+RY+YA+ + ++ A D R E +++ D +++ ++
Sbjct: 15 EAICGPMFAGKTDELIRKIKRYEYADVKSLVFSPATDTRSAQEIINSRDGRRIGSIKIKK 74
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A E+ + K ++GIDE QF +
Sbjct: 75 AFEIYDYVLLHKP-QLVGIDEVQFFD---------------------------------- 99
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+V +++A+ V+VA LD F+ F I ++ +AE V +LTA
Sbjct: 100 -----------DSIVEVIQTLADNQINVIVAGLDRDFRGEPFGPIPKILGIAESVIRLTA 148
Query: 330 VCMSCFRDAAFTKRI 344
+C C +A+ ++R+
Sbjct: 149 ICSECGAEASRSQRL 163
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDI 73
R+I+RY+YA+ + ++ A D R E + + D +++ ++ A E+ + K
Sbjct: 29 LIRKIKRYEYADVKSLVFSPATDTRSAQEIINSRDGRRIGSIKIKKAFEIYDYVLLHKP- 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
++GIDE QFF D +V +++A+ V+VA LD F+ F I ++ +AE V +LT
Sbjct: 88 QLVGIDEVQFFDDSIVEVIQTLADNQINVIVAGLDRDFRGEPFGPIPKILGIAESVIRLT 147
Query: 133 AVCMSCFRDAAFTKRI 148
A+C C +A+ ++R+
Sbjct: 148 AICSECGAEASRSQRL 163
>gi|294660593|ref|NP_853445.2| thymidine kinase [Mycoplasma gallisepticum str. R(low)]
gi|385325787|ref|YP_005880225.1| thymidine kinase [Mycoplasma gallisepticum str. R(high)]
gi|385326542|ref|YP_005880979.1| thymidine kinase [Mycoplasma gallisepticum str. F]
gi|401766554|ref|YP_006581560.1| thymidine kinase [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|401767308|ref|YP_006582313.1| thymidine kinase [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|401768080|ref|YP_006583084.1| thymidine kinase [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|401768841|ref|YP_006583844.1| thymidine kinase [Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|401769588|ref|YP_006584590.1| thymidine kinase [Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|401770341|ref|YP_006585342.1| thymidine kinase [Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|401771097|ref|YP_006586097.1| thymidine kinase [Mycoplasma gallisepticum CA06_2006.052-5-2P]
gi|401771845|ref|YP_006586844.1| thymidine kinase [Mycoplasma gallisepticum NC08_2008.031-4-3P]
gi|33860174|sp|Q8RLE0.2|KITH_MYCGA RecName: Full=Thymidine kinase
gi|284812256|gb|AAP57013.2| Thymidine kinase [Mycoplasma gallisepticum str. R(low)]
gi|284930943|gb|ADC30882.1| Thymidine kinase [Mycoplasma gallisepticum str. R(high)]
gi|284931698|gb|ADC31636.1| Thymidine kinase [Mycoplasma gallisepticum str. F]
gi|400272762|gb|AFP76225.1| Thymidine kinase [Mycoplasma gallisepticum VA94_7994-1-7P]
gi|400273530|gb|AFP76992.1| Thymidine kinase [Mycoplasma gallisepticum NC95_13295-2-2P]
gi|400274289|gb|AFP77750.1| Thymidine kinase [Mycoplasma gallisepticum NC96_1596-4-2P]
gi|400275057|gb|AFP78517.1| Thymidine kinase [Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|400275818|gb|AFP79277.1| Thymidine kinase [Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|400276565|gb|AFP80023.1| Thymidine kinase [Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|400277310|gb|AFP80767.1| Thymidine kinase [Mycoplasma gallisepticum CA06_2006.052-5-2P]
gi|400278074|gb|AFP81530.1| Thymidine kinase [Mycoplasma gallisepticum NC08_2008.031-4-3P]
Length = 224
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 49/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
E I GPMF+GKT ELIR+I+RY+YA+ + ++ A D R E +++ D +++ ++
Sbjct: 15 EAICGPMFAGKTDELIRKIKRYEYADVKSLVFSPATDTRSAQEIINSRDGRRIGSIKIKK 74
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A E+ + K ++GIDE QF +
Sbjct: 75 AFEIYDYVLLHKP-QLVGIDEVQFFD---------------------------------- 99
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+V +++A+ V+VA LD F+ F I ++ +AE V +LTA
Sbjct: 100 -----------DSIVEVIQTLADNQINVIVAGLDRDFRGEPFGPIPKILGIAESVIRLTA 148
Query: 330 VCMSCFRDAAFTKRI 344
+C C +A+ ++R+
Sbjct: 149 ICSECGAEASRSQRL 163
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 5/136 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDI 73
R+I+RY+YA+ + ++ A D R E + + D +++ ++ A E+ + K
Sbjct: 29 LIRKIKRYEYADVKSLVFSPATDTRSAQEIINSRDGRRIGSIKIKKAFEIYDYVLLHKP- 87
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
++GIDE QFF D +V +++A+ V+VA LD F+ F I ++ +AE V +LT
Sbjct: 88 QLVGIDEVQFFDDSIVEVIQTLADNQINVIVAGLDRDFRGEPFGPIPKILGIAESVIRLT 147
Query: 133 AVCMSCFRDAAFTKRI 148
A+C C +A+ ++R+
Sbjct: 148 AICSECGAEASRSQRL 163
>gi|398308677|ref|ZP_10512151.1| thymidine kinase [Bacillus mojavensis RO-H-1]
Length = 195
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D+RY + V +H+ +T+ +
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMTSYAITS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DVI +DE QF + +A I
Sbjct: 71 AADIWDHISESTDVIAVDEVQFFD------------------RAII-------------- 98
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
DV+S ++A+ G V+ A LD F+ F + ++ +AE V KL AVC
Sbjct: 99 ----------DVLS---ALADKGYRVIAAGLDMDFRGEPFGVVPDIMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + D+RY + V +H+ +T+ + + H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMTSYAITSAADIWDHISESTDV 84
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF ++ ++A+ G V+ A LD F+ F + ++ +AE V KL AV
Sbjct: 85 IAVDEVQFFDRAIIDVLSALADKGYRVIAAGLDMDFRGEPFGVVPDIMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|375364146|ref|YP_005132185.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|371570140|emb|CCF06990.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
Length = 196
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISESTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ +A+ G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 97 -----------IIGDLSLLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISSSAEIWDHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ +A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFGESIIGDLSLLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|394991252|ref|ZP_10384059.1| thymidine kinase [Bacillus sp. 916]
gi|393808024|gb|EJD69336.1| thymidine kinase [Bacillus sp. 916]
Length = 194
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISESTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ S+A+ G V+ A LD F+ F + +L+ +AE V KL A C
Sbjct: 97 -----------IIGDLSSLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAGC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISSSAEIWDHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ S+A+ G V+ A LD F+ F + +L+ +AE V KL A
Sbjct: 85 IAVDEVQFFGESIIGDLSSLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAG 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|451345137|ref|YP_007443768.1| thymidine kinase [Bacillus amyloliquefaciens IT-45]
gi|449848895|gb|AGF25887.1| thymidine kinase [Bacillus amyloliquefaciens IT-45]
Length = 196
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H +++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSITSHVISSSAEIWDHISENTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ +A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFGESIIGDLSLLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E++ G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELVCGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSITSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H +++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISENTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ +A+ G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 97 -----------IIGDLSLLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
>gi|389848303|ref|YP_006350542.1| thymidine kinase [Haloferax mediterranei ATCC 33500]
gi|388245609|gb|AFK20555.1| thymidine kinase [Haloferax mediterranei ATCC 33500]
Length = 179
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTK 71
RR+RR + A + + DDRY V TH + A + +++
Sbjct: 8 ELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDASVVPSEGDGVWQIVEELN 67
Query: 72 DIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
DV+ IDE FF ++V E +A GK VVV+ D TF+ FN + L+ LAE V+K
Sbjct: 68 GEDVVAIDEANFFSAELVGVCEQLAADGKRVVVSGTDQTFRAEPFNPVPQLMALAEYVDK 127
Query: 131 LTAVCMSCFRDAAFTKRI 148
L A+C C A +R+
Sbjct: 128 LQAICTICGEPATRNQRL 145
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 76/190 (40%), Gaps = 49/190 (25%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV----SAVELN 214
MFSGKT EL+RR+RR + A + + DDRY V TH + A +
Sbjct: 1 MFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGTHAGRSWDASVVPSEGDGVW 60
Query: 215 KLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+++ DV+ IDE F S + + VC
Sbjct: 61 QIVEELNGEDVVAIDEANFF-----SAELVGVC--------------------------- 88
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
E +A GK VVV+ D TF+ FN + L+ LAE V+KL A+C C
Sbjct: 89 -------------EQLAADGKRVVVSGTDQTFRAEPFNPVPQLMALAEYVDKLQAICTIC 135
Query: 335 FRDAAFTKRI 344
A +R+
Sbjct: 136 GEPATRNQRL 145
>gi|251797999|ref|YP_003012730.1| thymidine kinase [Paenibacillus sp. JDR-2]
gi|247545625|gb|ACT02644.1| Thymidine kinase [Paenibacillus sp. JDR-2]
Length = 212
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 14 IVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS------AVELNKLI 67
++ C+++ +Y R + A+DDR+ E++ + +L A S A + +++
Sbjct: 21 LIRRCQKLMKYGRKQVRAY--KPAEDDRFSNEEIVSRIGYRLPATSVPRALPASSVEQIL 78
Query: 68 PHTKDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
+KD DV+ DE FF +++ E +A GK ++V L+ ++ F I L+ +A+
Sbjct: 79 LESKDADVVAFDEASFFGKPIIALVEELAYQGKHIIVDGLNMDYRGKEFGYIGGLLAIAD 138
Query: 127 CVEKLTAVCMSCF-RDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVR 185
+ KLT+ C C +A FT+RI K LGP+F LI Y+ C +
Sbjct: 139 EIVKLTSFCAVCGDANATFTQRIVNGKPAKLGPVF------LIGDTESYEPRCRSCFVPP 192
Query: 186 YAKDDRYDTEKVSTHDQQKLT-AVSAVEL 213
+ KV+ D ++LT ++A +L
Sbjct: 193 H---------KVTGDDAEELTDTITASQL 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 53/207 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRY-QYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
VI+GPMFS K+ ELIRR ++ +Y + + A+DDR+ E++ + +L A S
Sbjct: 8 VIIGPMFSEKSGELIRRCQKLMKYGRKQVRAYKPAEDDRFSNEEIVSRIGYRLPATSVPR 67
Query: 210 ---AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
A + +++ +KD DV+ DE F
Sbjct: 68 ALPASSVEQILLESKDADVVAFDEASF--------------------------------- 94
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
P +++ E +A GK ++V L+ ++ F I L+ +A+ + K
Sbjct: 95 -----FGKP-------IIALVEELAYQGKHIIVDGLNMDYRGKEFGYIGGLLAIADEIVK 142
Query: 327 LTAVCMSCF-RDAAFTKRIGQEKEVRI 352
LT+ C C +A FT+RI K ++
Sbjct: 143 LTSFCAVCGDANATFTQRIVNGKPAKL 169
>gi|384161325|ref|YP_005543398.1| thymidine kinase [Bacillus amyloliquefaciens TA208]
gi|384166229|ref|YP_005547608.1| thymidine kinase [Bacillus amyloliquefaciens LL3]
gi|384170423|ref|YP_005551801.1| thymidine kinase [Bacillus amyloliquefaciens XH7]
gi|328555413|gb|AEB25905.1| thymidine kinase [Bacillus amyloliquefaciens TA208]
gi|328913784|gb|AEB65380.1| thymidine kinase [Bacillus amyloliquefaciens LL3]
gi|341829702|gb|AEK90953.1| thymidine kinase [Bacillus amyloliquefaciens XH7]
Length = 196
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISESTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ +A+ G V+ A LD F+ F + L+ +AE V KL AVC
Sbjct: 97 -----------IIDDLSMLADKGYRVIAAGLDMDFRGEPFGVVPDLMAVAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISSSAEIWDHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ +A+ G V+ A LD F+ F + L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFGESIIDDLSMLADKGYRVIAAGLDMDFRGEPFGVVPDLMAVAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|421729889|ref|ZP_16169018.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407075855|gb|EKE48839.1| thymidine kinase [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 196
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISSSAEIWDHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ +A+ G V+ A LD F+ F + +L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFGESIIGDLSLLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E++ G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELVCGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISESTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ +A+ G V+ A LD F+ F + +L+ +AE V KL AVC
Sbjct: 97 -----------IIGDLSLLADKGYRVIAAGLDMDFRGEPFGVVPNLMAVAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
>gi|319938512|ref|ZP_08012905.1| thymidine kinase [Coprobacillus sp. 29_1]
gi|319806276|gb|EFW02952.1| thymidine kinase [Coprobacillus sp. 29_1]
Length = 196
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 83/202 (41%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI +A ++ + D+RY ++ +H K+ +
Sbjct: 11 EVICGCMFAGKTEELIRRINVLSFAKKNIIVFKPKVDNRYSETEIVSHAGTKVQCIVVEN 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + K D DV+ IDE QF +
Sbjct: 71 SKDILRYIKPDTDVVAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V E +A+ G V+VA LD F+ F + L+ AE V KLTAVC
Sbjct: 95 ---------RDIVDVCEYLADRGLRVMVAGLDKDFRGEPFGVLPELLTRAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C A T+R+ K E
Sbjct: 146 AKCGAPATRTQRLVDGKPASFE 167
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI +A ++ + D+RY ++ +H K+ + ++ + K D DV+
Sbjct: 27 RRINVLSFAKKNIIVFKPKVDNRYSETEIVSHAGTKVQCIVVENSKDILRYIKPDTDVVA 86
Query: 78 IDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V E +A+ G V+VA LD F+ F + L+ AE V KLTAVC
Sbjct: 87 IDEVQFFDRDIVDVCEYLADRGLRVMVAGLDKDFRGEPFGVLPELLTRAEFVTKLTAVCA 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGAPATRTQRL 158
>gi|159899186|ref|YP_001545433.1| thymidine kinase [Herpetosiphon aurantiacus DSM 785]
gi|159892225|gb|ABX05305.1| Thymidine kinase [Herpetosiphon aurantiacus DSM 785]
Length = 202
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSA-V 211
EV+ G MFSGKT ELIRR++R Q A + + + A D RY E+V++H+ ++ A
Sbjct: 7 EVVCGSMFSGKTEELIRRVKRAQIARQKIQVFKPAIDTRYSDEEVASHNGVRVLATPVQT 66
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ + V+ IDE QF +
Sbjct: 67 AADIAAAIALETTVVAIDEVQFFD------------------------------------ 90
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
P V+ + +A+ G V+VA LD F+ F + L+ AE V KL A+C
Sbjct: 91 ---------PAVIDLCDLLAHRGVRVIVAGLDQDFRGEPFGPLPILLAKAEEVTKLQAIC 141
Query: 332 MSCFRDAAFTKRI 344
+ C + A+ T+R+
Sbjct: 142 VICGQAASRTQRL 154
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSA-VELNKLIPHTKDIDVIG 77
RR++R Q A + + + A D RY E+VA+H+ ++ A + + V+
Sbjct: 23 RRVKRAQIARQKIQVFKPAIDTRYSDEEVASHNGVRVLATPVQTAADIAAAIALETTVVA 82
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF P V+ + +A+ G V+VA LD F+ F + L+ AE V KL A+C+
Sbjct: 83 IDEVQFFDPAVIDLCDLLAHRGVRVIVAGLDQDFRGEPFGPLPILLAKAEEVTKLQAICV 142
Query: 137 SCFRDAAFTKRI 148
C + A+ T+R+
Sbjct: 143 ICGQAASRTQRL 154
>gi|452995542|emb|CCQ92815.1| Thymidine kinase [Clostridium ultunense Esp]
Length = 194
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 44/195 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + ++R+ A Y+ + + A D R+ ++ THD + A+ ++N+L
Sbjct: 13 GSMFSGKTSSLEKDVKRFNIAKYKTIAFKPAIDSRFRRNEIVTHDLTSMNAILVDDINQL 72
Query: 217 IPHTKDI--DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
I + ++ DVI IDE QF +GG
Sbjct: 73 IEYCNELKPDVIAIDEIQF---LGG----------------------------------- 94
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
+ D+++ + V+VA LD F F + L+P+A+ + K AVC+ C
Sbjct: 95 ----KVGDIIAGINGLLEKDFTVIVAGLDMDFTGKPFEIVKELMPIADYLYKHHAVCVRC 150
Query: 335 FRDAAFTKRIGQEKE 349
D + R +++E
Sbjct: 151 GNDGWVSHRKSEDQE 165
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI--DVI 76
+ ++R+ A Y+ + + A D R+ ++ THD + A+ ++N+LI + ++ DVI
Sbjct: 25 KDVKRFNIAKYKTIAFKPAIDSRFRRNEIVTHDLTSMNAILVDDINQLIEYCNELKPDVI 84
Query: 77 GIDEGQFFP----DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
IDE QF D+++ + V+VA LD F F + L+P+A+ + K
Sbjct: 85 AIDEIQFLGGKVGDIIAGINGLLEKDFTVIVAGLDMDFTGKPFEIVKELMPIADYLYKHH 144
Query: 133 AVCMSCFRDAAFTKRIGQEKEVI 155
AVC+ C D + R +++E I
Sbjct: 145 AVCVRCGNDGWVSHRKSEDQERI 167
>gi|347755361|ref|YP_004862925.1| thymidine kinase [Candidatus Chloracidobacterium thermophilum B]
gi|347587879|gb|AEP12409.1| Thymidine kinase [Candidatus Chloracidobacterium thermophilum B]
Length = 201
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL--TAVSAVE--LNKLIPHTKDIDV 75
R+RR A + DDRY+ + +H + ++ V + E L L P T+ V
Sbjct: 29 RLRRALIARQTVQAFKPRLDDRYEANFIVSHSRLRIETQVVESAEDILECLRPETQ---V 85
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+GIDEGQF +VS +A G+ V+VAALD ++ F I L+ +AE V K A+
Sbjct: 86 VGIDEGQFLGAGLVSVCHQLAQEGRRVIVAALDLDYRGEPFEPIPHLLAMAEYVSKPQAI 145
Query: 135 CMSCFRDAAFTKR-IGQEKEVILG 157
C+ C A F++R I E+ V++G
Sbjct: 146 CVVCGHPANFSQRLIADERRVVVG 169
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 84/196 (42%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL--TAVSA 210
EVI G MFSGKT LI R+RR A + DDRY+ + +H + ++ V +
Sbjct: 12 EVIAGGMFSGKTEALITRLRRALIARQTVQAFKPRLDDRYEANFIVSHSRLRIETQVVES 71
Query: 211 VE--LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E L L P T+ V+GIDEGQF+
Sbjct: 72 AEDILECLRPETQ---VVGIDEGQFL---------------------------------- 94
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
A L VS +A G+ V+VAALD ++ F I L+ +AE V K
Sbjct: 95 GAGL-----------VSVCHQLAQEGRRVIVAALDLDYRGEPFEPIPHLLAMAEYVSKPQ 143
Query: 329 AVCMSCFRDAAFTKRI 344
A+C+ C A F++R+
Sbjct: 144 AICVVCGHPANFSQRL 159
>gi|308175434|ref|YP_003922139.1| thymidine kinase [Bacillus amyloliquefaciens DSM 7]
gi|307608298|emb|CBI44669.1| thymidine kinase [Bacillus amyloliquefaciens DSM 7]
Length = 196
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + A D+RY E V +H+ +T+
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISS 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H ++ DVI +DE QF G S
Sbjct: 71 SAEIWDHISESTDVIAVDEVQF---FGES------------------------------- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ +A+ G V+ A LD F+ F + L+ +AE V KL AVC
Sbjct: 97 -----------IIDDLSMLADKGYRVIAAGLDMDFRGEPFGVVPDLMAVAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + A D+RY E V +H+ +T+ ++ H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVKVFKPAIDNRYSEEAVVSHNGTSMTSHVISSSAEIWDHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + ++ +A+ G V+ A LD F+ F + L+ +AE V KL AV
Sbjct: 85 IAVDEVQFFGESIIDDLSMLADKGYRVIAAGLDMDFRGEPFGVVPDLMAVAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|350566573|ref|ZP_08935230.1| thymidine kinase [Peptoniphilus indolicus ATCC 29427]
gi|348662577|gb|EGY79235.1| thymidine kinase [Peptoniphilus indolicus ATCC 29427]
Length = 195
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 44/192 (22%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
V G MFSGKT+ L R I+R+Q A Y+ + + D R + +++STHD L AV +
Sbjct: 10 VHTGSMFSGKTSSLEREIKRFQIAGYKTVAFKPKLDTRGEEQRISTHDNTHLNAVMCDNI 69
Query: 214 NKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ + + ++ +DVIGIDE QF+E I+R
Sbjct: 70 DTIAEYIENNKVDVIGIDEVQFLE-------------------GDIQR------------ 98
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++ + K VVVA LD F+ F+ + L+ A+ + K AVC
Sbjct: 99 -----------ILDQIDEFLRKKKTVVVAGLDMDFEANPFDLVKELMARADYLYKHHAVC 147
Query: 332 MSCFRDAAFTKR 343
C DA + R
Sbjct: 148 TVCGADAWVSHR 159
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--IDVI 76
R I+R+Q A Y+ + + D R + ++++THD L AV ++ + + ++ +DVI
Sbjct: 25 REIKRFQIAGYKTVAFKPKLDTRGEEQRISTHDNTHLNAVMCDNIDTIAEYIENNKVDVI 84
Query: 77 GIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
GIDE QF ++ + K VVVA LD F+ F+ + L+ A+ + K
Sbjct: 85 GIDEVQFLEGDIQRILDQIDEFLRKKKTVVVAGLDMDFEANPFDLVKELMARADYLYKHH 144
Query: 133 AVCMSCFRDAAFTKRIGQEKEVIL 156
AVC C DA + R ++ I+
Sbjct: 145 AVCTVCGADAWVSHRKSKDTNRIV 168
>gi|398305190|ref|ZP_10508776.1| thymidine kinase [Bacillus vallismortis DV1-F-3]
Length = 195
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I G MFSGK+ ELIRR++R YA + + D+RY + V +H+ + + +
Sbjct: 11 ELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMKSYAISA 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H ++ DVI +DE QF +
Sbjct: 71 AADIWEHISESTDVIAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V S+A+ G V+ A LD F+ F + ++ +AE V KL AVC
Sbjct: 95 ---------EGIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPDIMAIAESVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
RR++R YA + + D+RY + V +H+ + + + + H ++ DV
Sbjct: 25 LIRRVKRATYAKQEVRVFKPVIDNRYSEDAVVSHNGTSMKSYAISAAADIWEHISESTDV 84
Query: 76 IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I +DE QFF + +V S+A+ G V+ A LD F+ F + ++ +AE V KL AV
Sbjct: 85 IAVDEVQFFDEGIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPDIMAIAESVTKLQAV 144
Query: 135 CMSCFRDAAFTKRI 148
C C A+ T+R+
Sbjct: 145 CSVCGSPASRTQRL 158
>gi|171920596|ref|ZP_02695615.2| thymidine kinase [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|185178727|ref|ZP_02554498.2| thymidine kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|188024357|ref|ZP_02570580.2| thymidine kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188518424|ref|ZP_02556522.2| thymidine kinase [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|188524219|ref|ZP_02557636.2| thymidine kinase [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195867402|ref|ZP_03079406.1| thymidine kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|198273584|ref|ZP_03206120.1| thymidine kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
gi|209554193|ref|YP_002285049.1| thymidine kinase [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225551407|ref|ZP_03772353.1| thymidine kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
gi|238056555|sp|B5ZCA9.1|KITH_UREU1 RecName: Full=Thymidine kinase
gi|171903306|gb|EDT49595.1| thymidine kinase [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|184209328|gb|EDU06371.1| thymidine kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|188018623|gb|EDU56663.1| thymidine kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188998199|gb|EDU67296.1| thymidine kinase [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|195660006|gb|EDX53386.1| thymidine kinase [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195660878|gb|EDX54131.1| thymidine kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|198250104|gb|EDY74884.1| thymidine kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
gi|209541694|gb|ACI59923.1| thymidine kinase [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225379222|gb|EEH01587.1| thymidine kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
Length = 223
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 55/208 (26%)
Query: 143 AFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ 202
AF+K++G E+I GPMF+GKT ELIRR+ R +YA+ + ++ + D R T+ + +
Sbjct: 6 AFSKKVGW-IELITGPMFAGKTAELIRRLHRLEYADVKYLVFKPRIDTR-STQNIKSRTG 63
Query: 203 QKLTAVSAVELNKLIPHT------KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAP 256
L ++ +++ + +I VIGIDE QF
Sbjct: 64 TSLPSIEVENAPEILSYIMSDNFDNEIKVIGIDEVQF----------------------- 100
Query: 257 IKRSPFKTLANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDIL 315
F D + A +A G +V+++ LD F+ F I
Sbjct: 101 -----------------------FDDRICEVANILAENGFVVIISGLDKNFKGEPFGPIA 137
Query: 316 SLIPLAECVEKLTAVCMSCFRDAAFTKR 343
L A+ + KLTA+C C +A + R
Sbjct: 138 KLFAYADKITKLTAICNECGAEATHSLR 165
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT------KD 72
RR+ R +YA+ + ++ + D R T+ + + L ++ +++ + +
Sbjct: 31 RRLHRLEYADVKYLVFKPRIDTR-STQNIKSRTGTSLPSIEVENAPEILSYIMSDNFDNE 89
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
I VIGIDE QFF D + A +A G +V+++ LD F+ F I L A+ + KL
Sbjct: 90 IKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNFKGEPFGPIAKLFAYADKITKL 149
Query: 132 TAVCMSCFRDAAFTKR 147
TA+C C +A + R
Sbjct: 150 TAICNECGAEATHSLR 165
>gi|448602401|ref|ZP_21656457.1| thymidine kinase [Haloferax sulfurifontis ATCC BAA-897]
gi|445747916|gb|ELZ99370.1| thymidine kinase [Haloferax sulfurifontis ATCC BAA-897]
Length = 195
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR+RR + A + + DDRY V +H + A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEASVVPS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ ++ DV+ IDE F
Sbjct: 71 EGEGVWQIAEELNGEDVVAIDEANFFSA-------------------------------- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E++A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 99 -------------ELVDVCEALAADGKRVVVSGTDQTFRAEPFDPVPQLMALAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTVCGEPATRNQRL 161
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR + A + + DDRY V +H + A + ++
Sbjct: 25 LLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEASVVPSEGEGVWQIAEELNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V E++A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 85 EDVVAIDEANFFSAELVDVCEALAADGKRVVVSGTDQTFRAEPFDPVPQLMALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTVCGEPATRNQRL 161
>gi|225550554|ref|ZP_03771503.1| thymidine kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
gi|225379708|gb|EEH02070.1| thymidine kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
Length = 223
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 55/208 (26%)
Query: 143 AFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ 202
AF+K++G E+I GPMF+GKT ELIRR+ R +YA+ + ++ + D R T+ + +
Sbjct: 6 AFSKKVGW-IELITGPMFAGKTAELIRRLHRLEYADVKYLVFKPRIDTR-STQNIKSRTG 63
Query: 203 QKLTAVSAVELNKLIPHT------KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAP 256
L ++ +++ + +I VIGIDE QF
Sbjct: 64 TSLPSIEVENAPEILSYIMSDNFDNEIKVIGIDEVQF----------------------- 100
Query: 257 IKRSPFKTLANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDIL 315
F D + A +A G +V+++ LD F+ F I
Sbjct: 101 -----------------------FDDRICEVANILAENGFVVIISGLDKNFKDEPFGPIA 137
Query: 316 SLIPLAECVEKLTAVCMSCFRDAAFTKR 343
L A+ + KLTA+C C +A + R
Sbjct: 138 KLFAYADKITKLTAICNECGAEATHSLR 165
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT------KD 72
RR+ R +YA+ + ++ + D R T+ + + L ++ +++ + +
Sbjct: 31 RRLHRLEYADVKYLVFKPRIDTR-STQNIKSRTGTSLPSIEVENAPEILSYIMSDNFDNE 89
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
I VIGIDE QFF D + A +A G +V+++ LD F+ F I L A+ + KL
Sbjct: 90 IKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNFKDEPFGPIAKLFAYADKITKL 149
Query: 132 TAVCMSCFRDAAFTKR 147
TA+C C +A + R
Sbjct: 150 TAICNECGAEATHSLR 165
>gi|157153609|gb|ABV24875.1| thymidine kinase [Avipoxvirus blackcap/CZE/2007]
Length = 83
Score = 71.2 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 49/67 (73%)
Query: 286 FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIG 345
F+E MAN GKIV++AAL+G F+R F +I L+ L+E V LTA+C C +A+F+KR+
Sbjct: 1 FSEIMANKGKIVIIAALNGDFKRELFGNIFKLLSLSESVTSLTAICAVCKNEASFSKRMT 60
Query: 346 QEKEVRI 352
+K+V++
Sbjct: 61 DDKDVKV 67
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 90 FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIG 149
F+E MAN GKIV++AAL+G F+R F +I L+ L+E V LTA+C C +A+F+KR+
Sbjct: 1 FSEIMANKGKIVIIAALNGDFKRELFGNIFKLLSLSESVTSLTAICAVCKNEASFSKRMT 60
Query: 150 QEKEV 154
+K+V
Sbjct: 61 DDKDV 65
>gi|390953808|ref|YP_006417566.1| thymidine kinase [Aequorivita sublithincola DSM 14238]
gi|390419794|gb|AFL80551.1| thymidine kinase [Aequorivita sublithincola DSM 14238]
Length = 219
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR++R ++A + I + D RY + V++HD ++ +
Sbjct: 17 EVISGSMFSGKSEELIRRLKRAKFARQKVEIFTPSIDTRYAEDAVTSHDSNQIRSTPVPA 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + DV+GIDE QF + D+ + VC +
Sbjct: 77 AANIPILADNCDVVGIDEAQFFD-----DEIVKVCND----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD ++ F + +L+ AE V K+ A+C
Sbjct: 109 -----------------LANRGVRVIVAGLDMDYKGNPFGPMPALMATAEYVTKVHAICT 151
Query: 333 SCFRDAAFTKR 343
A ++ R
Sbjct: 152 RTGNLAHYSYR 162
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVI 76
RR++R ++A + I + D RY + V +HD ++ + + + DV+
Sbjct: 31 LIRRLKRAKFARQKVEIFTPSIDTRYAEDAVTSHDSNQIRSTPVPAAANIPILADNCDVV 90
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF D +V +AN G V+VA LD ++ F + +L+ AE V K+ A+C
Sbjct: 91 GIDEAQFFDDEIVKVCNDLANRGVRVIVAGLDMDYKGNPFGPMPALMATAEYVTKVHAIC 150
Query: 136 MSCFRDAAFTKRIGQEKEVIL 156
A ++ R + + ++L
Sbjct: 151 TRTGNLAHYSYRKAKSEALVL 171
>gi|375083892|ref|ZP_09730906.1| thymidine kinase [Thermococcus litoralis DSM 5473]
gi|374741484|gb|EHR77908.1| thymidine kinase [Thermococcus litoralis DSM 5473]
Length = 192
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 53/199 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA--VSA 210
EVI GPMF+GKT+ELI+RI R +A + + + + D+RY +KV H+ A V
Sbjct: 8 EVITGPMFAGKTSELIKRIERQIFAKRKAALFKPSIDNRYSEDKVVAHNGLSYEAFVVPT 67
Query: 211 VE--LNKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
E + + TK D +VIGIDE QF
Sbjct: 68 TEEGVRTIYQKTKEEDFEVIGIDEVQF--------------------------------- 94
Query: 267 NENAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FP +V +A+ G V+ + L+ F+ F L+ LA+ +
Sbjct: 95 -------------FPMSIVEILNKLADEGVYVIASGLNLDFKGEPFEVTKELLALADNIV 141
Query: 326 KLTAVCMSCFRDAAFTKRI 344
LTA+C C R+A T+R+
Sbjct: 142 YLTAICSVCGREATRTQRL 160
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA--VSAVE--LNKLIPHTK- 71
+RI R +A + + + + D+RY +KV H+ A V E + + TK
Sbjct: 22 LIKRIERQIFAKRKAALFKPSIDNRYSEDKVVAHNGLSYEAFVVPTTEEGVRTIYQKTKE 81
Query: 72 -DIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
D +VIGIDE QFFP +V +A+ G V+ + L+ F+ F L+ LA+ +
Sbjct: 82 EDFEVIGIDEVQFFPMSIVEILNKLADEGVYVIASGLNLDFKGEPFEVTKELLALADNIV 141
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTA+C C R+A T+R+
Sbjct: 142 YLTAICSVCGREATRTQRL 160
>gi|409096813|ref|ZP_11216837.1| thymidine kinase [Thermococcus zilligii AN1]
Length = 194
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL------T 206
EVI GPMF+GKTTELI+R+ R +A + + + A D RY E V H+ T
Sbjct: 8 EVITGPMFAGKTTELIKRVERQAFARRKVALFKPAIDTRYSAEGVVAHNGLSYGAYIVPT 67
Query: 207 AVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ VEL + + + ++VIG+DE QF P+K
Sbjct: 68 SEEGVELIREVTLREGLEVIGVDEVQFF---------------------PMK-------- 98
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+V +++A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 99 ----------------IVEVLDTLASRGVYVIASGLNLDFKGDPFPVTRELLVRADSIVY 142
Query: 327 LTAVCMSCFRDAAFTKRI 344
LTAVC C R A ++R+
Sbjct: 143 LTAVCTVCGRPATRSQRL 160
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL------TAVSAVELNKLIPHT 70
+R+ R +A + + + A D RY E V H+ T+ VEL + +
Sbjct: 22 LIKRVERQAFARRKVALFKPAIDTRYSAEGVVAHNGLSYGAYIVPTSEEGVELIREVTLR 81
Query: 71 KDIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
+ ++VIG+DE QFFP +V +++A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 82 EGLEVIGVDEVQFFPMKIVEVLDTLASRGVYVIASGLNLDFKGDPFPVTRELLVRADSIV 141
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTAVC C R A ++R+
Sbjct: 142 YLTAVCTVCGRPATRSQRL 160
>gi|409099623|ref|ZP_11219647.1| thymidine kinase [Pedobacter agri PB92]
Length = 172
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR++R Q A I + D RY V +HD + + + ++ + V+GI
Sbjct: 14 RRLKRAQIAKLNVEIFKPRTDTRYHESAVVSHDLNSINSTPVDSASAILLLGTNTQVVGI 73
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF + + +A G V+VA LD F F + +L+ +AE V K+ AVC+
Sbjct: 74 DEAQFFDNELPEVCNKLAMKGIRVIVAGLDMDFTGKPFGPMPALMAIAEHVTKVNAVCVC 133
Query: 138 CFRDAAFTKR-IGQEKEVILG 157
C A ++ R + E V+LG
Sbjct: 134 CGNPALYSYRTVADENTVLLG 154
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 45/183 (24%)
Query: 161 SGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIPHT 220
SGKT ELIRR++R Q A I + D RY V +HD + + + ++
Sbjct: 6 SGKTEELIRRLKRAQIAKLNVEIFKPRTDTRYHESAVVSHDLNSINSTPVDSASAILLLG 65
Query: 221 KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPPPPEF 280
+ V+GIDE QF + E
Sbjct: 66 TNTQVVGIDEAQFFD------------------------------------------NEL 83
Query: 281 PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAF 340
P+V + +A G V+VA LD F F + +L+ +AE V K+ AVC+ C A +
Sbjct: 84 PEVCN---KLAMKGIRVIVAGLDMDFTGKPFGPMPALMAIAEHVTKVNAVCVCCGNPALY 140
Query: 341 TKR 343
+ R
Sbjct: 141 SYR 143
>gi|13358159|ref|NP_078433.1| thymidine kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|170762223|ref|YP_001752679.1| thymidine kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171920507|ref|ZP_02690810.2| thymidine kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|183508662|ref|ZP_02689655.2| thymidine kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|186701854|ref|ZP_02553468.2| thymidine kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
gi|38258258|sp|Q9PPP5.1|KITH_UREPA RecName: Full=Thymidine kinase
gi|189028753|sp|B1AJN5.1|KITH_UREP2 RecName: Full=Thymidine kinase
gi|11357056|pir||F82870 thymidine kinase UU594 [imported] - Ureaplasma urealyticum
gi|6899605|gb|AAF31008.1|AE002158_6 thymidine kinase [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827800|gb|ACA33062.1| thymidine kinase [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171902981|gb|EDT49270.1| thymidine kinase [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|182676130|gb|EDT88035.1| thymidine kinase [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|186701150|gb|EDU19432.1| thymidine kinase [Ureaplasma parvum serovar 6 str. ATCC 27818]
Length = 223
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 61/211 (28%)
Query: 143 AFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ 202
AF+K+IG E+I GPMF+GKT ELIRR+ R +YA+ + ++ + + DT +
Sbjct: 6 AFSKKIGW-IELITGPMFAGKTAELIRRLHRLEYADVKYLVFK----PKIDTRSIRNIQS 60
Query: 203 QKLTAVSAVE-------LNKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQ 253
+ T++ +VE LN ++ ++ + VIGIDE QF
Sbjct: 61 RTGTSLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQF-------------------- 100
Query: 254 KAPIKRSPFKTLANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFN 312
F D + A +A G +V+++ LD F+ F
Sbjct: 101 --------------------------FDDRICEVANILAENGFVVIISGLDKNFKGEPFG 134
Query: 313 DILSLIPLAECVEKLTAVCMSCFRDAAFTKR 343
I L A+ + KLTA+C C +A + R
Sbjct: 135 PIAKLFTYADKITKLTAICNECGAEATHSLR 165
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-------LNKLIPHT- 70
RR+ R +YA+ + ++ + + DT + + T++ +VE LN ++ ++
Sbjct: 31 RRLHRLEYADVKYLVFK----PKIDTRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSF 86
Query: 71 -KDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ VIGIDE QFF D + A +A G +V+++ LD F+ F I L A+ +
Sbjct: 87 NDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNFKGEPFGPIAKLFTYADKI 146
Query: 129 EKLTAVCMSCFRDAAFTKR 147
KLTA+C C +A + R
Sbjct: 147 TKLTAICNECGAEATHSLR 165
>gi|433436642|ref|ZP_20408227.1| thymidine kinase [Haloferax sp. BAB2207]
gi|448565118|ref|ZP_21636089.1| thymidine kinase [Haloferax prahovense DSM 18310]
gi|448568101|ref|ZP_21637709.1| thymidine kinase [Haloferax lucentense DSM 14919]
gi|448583066|ref|ZP_21646535.1| thymidine kinase [Haloferax gibbonsii ATCC 33959]
gi|448601026|ref|ZP_21656309.1| thymidine kinase [Haloferax alexandrinus JCM 10717]
gi|448622780|ref|ZP_21669429.1| thymidine kinase [Haloferax denitrificans ATCC 35960]
gi|432191296|gb|ELK48261.1| thymidine kinase [Haloferax sp. BAB2207]
gi|445715777|gb|ELZ67530.1| thymidine kinase [Haloferax prahovense DSM 18310]
gi|445727563|gb|ELZ79174.1| thymidine kinase [Haloferax lucentense DSM 14919]
gi|445730023|gb|ELZ81615.1| thymidine kinase [Haloferax gibbonsii ATCC 33959]
gi|445734629|gb|ELZ86187.1| thymidine kinase [Haloferax alexandrinus JCM 10717]
gi|445753288|gb|EMA04705.1| thymidine kinase [Haloferax denitrificans ATCC 35960]
Length = 195
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR+RR + A + + DDRY V +H + A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEASVVPS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ ++ DV+ IDE F
Sbjct: 71 EGEGVWQIAEELNGEDVVAIDEANFFSA-------------------------------- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E++A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 99 -------------ELVDVCEALAADGKRVVVSGTDQTFRAEPFDPLPQLMALAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTVCGEPATRNQRL 161
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR + A + + DDRY V +H + A + ++
Sbjct: 25 LLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEASVVPSEGEGVWQIAEELNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V E++A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 85 EDVVAIDEANFFSAELVDVCEALAADGKRVVVSGTDQTFRAEPFDPLPQLMALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTVCGEPATRNQRL 161
>gi|54020273|ref|YP_116135.1| thymidine kinase [Mycoplasma hyopneumoniae 232]
gi|71893959|ref|YP_279405.1| thymidine kinase [Mycoplasma hyopneumoniae J]
gi|72080936|ref|YP_287994.1| thymidine kinase [Mycoplasma hyopneumoniae 7448]
gi|385334767|ref|YP_005888714.1| thymidine kinase [Mycoplasma hyopneumoniae 168]
gi|60389918|sp|Q5ZZT0.1|KITH_MYCH2 RecName: Full=Thymidine kinase
gi|109892485|sp|Q4A7B8.1|KITH_MYCH7 RecName: Full=Thymidine kinase
gi|109892486|sp|Q4A977.1|KITH_MYCHJ RecName: Full=Thymidine kinase
gi|53987446|gb|AAV27647.1| thymidine kinase [Mycoplasma hyopneumoniae 232]
gi|71852086|gb|AAZ44694.1| thymidine kinase [Mycoplasma hyopneumoniae J]
gi|71914060|gb|AAZ53971.1| thymidine kinase [Mycoplasma hyopneumoniae 7448]
gi|312601553|gb|ADQ90808.1| Thymidine kinase [Mycoplasma hyopneumoniae 168]
Length = 184
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 49/194 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL---TAVS 209
EVI GPMFSGK+ ELI+RI+ YA+ + ++++ + D R+ ++ + K+ A +
Sbjct: 11 EVITGPMFSGKSDELIKRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFLART 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
E+ L + I IDE QF +
Sbjct: 71 TQEIRDLFTR-DNYQAIAIDEIQFFD---------------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++V+F E +A+ G V+V+ LD F+R F + +L+ +AE V KL A
Sbjct: 96 -----------EEIVTFLEQIADKGIRVIVSGLDQDFRRKPFGSLPNLMAIAENVTKLQA 144
Query: 330 VCMSCFRDAAFTKR 343
VC C R A T R
Sbjct: 145 VCSLCKRAATTTAR 158
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL---TAVSAVELNKLIPHTKDIDV 75
+RI+ YA+ + ++++ + D R+ ++ + K+ A + E+ L +
Sbjct: 27 KRIKILTYADIKTLVIKPSVDYRFSQCEIVSRSGLKIPTFLARTTQEIRDLFTR-DNYQA 85
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QFF ++V+F E +A+ G V+V+ LD F+R F + +L+ +AE V KL AV
Sbjct: 86 IAIDEIQFFDEEIVTFLEQIADKGIRVIVSGLDQDFRRKPFGSLPNLMAIAENVTKLQAV 145
Query: 135 CMSCFRDAAFTKR-IGQEKEVILG 157
C C R A T R + E + ++G
Sbjct: 146 CSLCKRAATTTARKVLNEAQTLIG 169
>gi|167754865|ref|ZP_02426992.1| hypothetical protein CLORAM_00369 [Clostridium ramosum DSM 1402]
gi|237735403|ref|ZP_04565884.1| thymidine kinase [Mollicutes bacterium D7]
gi|365829785|ref|ZP_09371376.1| hypothetical protein HMPREF1021_00140 [Coprobacillus sp. 3_3_56FAA]
gi|374626605|ref|ZP_09699017.1| hypothetical protein HMPREF0978_02337 [Coprobacillus sp.
8_2_54BFAA]
gi|167704915|gb|EDS19494.1| thymidine kinase [Clostridium ramosum DSM 1402]
gi|229381148|gb|EEO31239.1| thymidine kinase [Coprobacillus sp. D7]
gi|365264366|gb|EHM94175.1| hypothetical protein HMPREF1021_00140 [Coprobacillus sp. 3_3_56FAA]
gi|373914133|gb|EHQ45966.1| hypothetical protein HMPREF0978_02337 [Coprobacillus sp.
8_2_54BFAA]
Length = 196
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 83/202 (41%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI YA ++ + D+RY ++ +H K+ + +
Sbjct: 11 EVISGCMFAGKTEELIRRINVLSYAKKNIIVFKPKIDNRYSDSEIVSHSGAKVPCLVVEK 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + D +V+ IDE QF +
Sbjct: 71 AQDILKKIEADTEVVAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V E +A+ G V+VA LD F+ F + L+ AE V KLTAVC
Sbjct: 95 ---------KDIVEVCEYLADKGIRVMVAGLDKDFRGESFGVMPELLTRAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
C A T+R+ K E
Sbjct: 146 AKCGAPATRTQRLVNGKPAGFE 167
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIG 77
RRI YA ++ + D+RY ++ +H K+ + + ++ + D +V+
Sbjct: 27 RRINVLSYAKKNIIVFKPKIDNRYSDSEIVSHSGAKVPCLVVEKAQDILKKIEADTEVVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF D+V E +A+ G V+VA LD F+ F + L+ AE V KLTAVC
Sbjct: 87 IDEVQFFDKDIVEVCEYLADKGIRVMVAGLDKDFRGESFGVMPELLTRAEFVTKLTAVCA 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGAPATRTQRL 158
>gi|313888493|ref|ZP_07822160.1| thymidine kinase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845522|gb|EFR32916.1| thymidine kinase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 200
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDID--VI 76
+ ++R+ ANY+ + + D RY ++ THD+ L AV +N+++ + + VI
Sbjct: 25 KDLKRFSIANYKVVAFKPLMDKRYAKNEIVTHDKISLDAVEVESINEILAYVEKYSPQVI 84
Query: 77 GIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
GIDE QF D V+ E + + G +V+A LD + F + L+P + + K
Sbjct: 85 GIDEVQFLCDTPELVLEDLEKILDMGITIVLAGLDMDYMAQPFEIVKELMPKVDYLNKHH 144
Query: 133 AVCMSCFRDAAFTKR-IGQEKEVILG 157
AVC C DA + R I +K V LG
Sbjct: 145 AVCKKCGTDAWVSHRKIKSDKRVELG 170
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + ++R+ ANY+ + + D RY ++ THD+ L AV +N++
Sbjct: 13 GSMFSGKTSSLEKDLKRFSIANYKVVAFKPLMDKRYAKNEIVTHDKISLDAVEVESINEI 72
Query: 217 IPHTKDID--VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ + + VIGIDE QF +C
Sbjct: 73 LAYVEKYSPQVIGIDEVQF------------LC--------------------------- 93
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
PE V+ E + + G +V+A LD + F + L+P + + K AVC C
Sbjct: 94 -DTPEL--VLEDLEKILDMGITIVLAGLDMDYMAQPFEIVKELMPKVDYLNKHHAVCKKC 150
Query: 335 FRDAAFTKR-IGQEKEVRI 352
DA + R I +K V +
Sbjct: 151 GTDAWVSHRKIKSDKRVEL 169
>gi|390961647|ref|YP_006425481.1| thymidine kinase [Thermococcus sp. CL1]
gi|390519955|gb|AFL95687.1| thymidine kinase [Thermococcus sp. CL1]
Length = 193
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 53/199 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA--VSA 210
EVI GPMF+GKTTELI+RI R +A + + + A D+RY ++V H+ + A VS
Sbjct: 9 EVITGPMFAGKTTELIKRIERQTFAKRKAALFKPAIDNRYSEDEVVAHNGLRYEAFVVST 68
Query: 211 VE--LNKLIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
E + +++ T+ + DVIGIDE QF
Sbjct: 69 DEDGVRRIVEITRKGNYDVIGIDEVQF--------------------------------- 95
Query: 267 NENAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FP D+V E +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 96 -------------FPMDIVGALEELADEGVYVIASGLNLDFKAEPFPVTKELLVRADNIV 142
Query: 326 KLTAVCMSCFRDAAFTKRI 344
LTAVC C + A ++R+
Sbjct: 143 YLTAVCTVCGKPATRSQRL 161
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA--VSAVE--LNKLIPHTK- 71
+RI R +A + + + A D+RY ++V H+ + A VS E + +++ T+
Sbjct: 23 LIKRIERQTFAKRKAALFKPAIDNRYSEDEVVAHNGLRYEAFVVSTDEDGVRRIVEITRK 82
Query: 72 -DIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
+ DVIGIDE QFFP D+V E +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 83 GNYDVIGIDEVQFFPMDIVGALEELADEGVYVIASGLNLDFKAEPFPVTKELLVRADNIV 142
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTAVC C + A ++R+
Sbjct: 143 YLTAVCTVCGKPATRSQRL 161
>gi|292657004|ref|YP_003536901.1| thymidine kinase [Haloferax volcanii DS2]
gi|448293605|ref|ZP_21483709.1| thymidine kinase [Haloferax volcanii DS2]
gi|291371393|gb|ADE03620.1| thymidine kinase [Haloferax volcanii DS2]
gi|445569936|gb|ELY24503.1| thymidine kinase [Haloferax volcanii DS2]
Length = 195
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR+RR + A + + DDRY V +H + A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEASVVPS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ ++ DV+ IDE F
Sbjct: 71 EGEGVWQIAEELNGEDVVAIDEANFFSA-------------------------------- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E++A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 99 -------------ELVDVCEALAADGKRVVVSGTDQTFRAEPFDPLPQLMALAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTLCGEPATRNQRL 161
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR + A + + DDRY V +H + A + ++
Sbjct: 25 LLRRLRRAEIAGQEISVFKPQLDDRYGETTVGSHAGRSWEASVVPSEGEGVWQIAEELNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V E++A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 85 EDVVAIDEANFFSAELVDVCEALAADGKRVVVSGTDQTFRAEPFDPLPQLMALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTLCGEPATRNQRL 161
>gi|448466146|ref|ZP_21599023.1| thymidine kinase [Halorubrum kocurii JCM 14978]
gi|445814450|gb|EMA64413.1| thymidine kinase [Halorubrum kocurii JCM 14978]
Length = 208
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 83/196 (42%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
EVI G MFSGKT EL+RR+RR + A + + A DDRY + TH+ ++ A V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGTHNGRQWDATVVEN 70
Query: 212 ELNKLIPHTKD---IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E + + D +V+ IDE F SD + VC
Sbjct: 71 EGDGPLAILDDDPYPEVVAIDEANFF-----SDALVEVCN-------------------- 105
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++A+ G V+V+ D TF+ F + L+ AE V+KL
Sbjct: 106 --------------------ALADNGTRVIVSGTDQTFRGEPFEPLPELMATAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A+ +R+
Sbjct: 146 AICSQCGEPASRNQRL 161
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKD-- 72
RR+RR + A + + A DDRY + TH+ ++ A V E + + D
Sbjct: 24 ELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGTHNGRQWDATVVENEGDGPLAILDDDP 83
Query: 73 -IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+V+ IDE FF D +V ++A+ G V+V+ D TF+ F + L+ AE V+K
Sbjct: 84 YPEVVAIDEANFFSDALVEVCNALADNGTRVIVSGTDQTFRGEPFEPLPELMATAEYVDK 143
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDD 190
L A+C C A+ +R+ + + P + T L+ Y+ C ++R +
Sbjct: 144 LQAICSQCGEPASRNQRLIEGE-----PAHTEDPTILVGAEESYEARCRDCHVLRTGERS 198
Query: 191 RYD 193
D
Sbjct: 199 EAD 201
>gi|433624623|ref|YP_007258253.1| Thymidine kinase [Mycoplasma cynos C142]
gi|429534649|emb|CCP24151.1| Thymidine kinase [Mycoplasma cynos C142]
Length = 191
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 46/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT EL++RI+ ++ A ++ + A D R+D +K+ + K A+S
Sbjct: 11 EVITGPMFSGKTEELLKRIKIFEIAEINTLVFKPAFDTRFDAKKIVSRTGAKTKAISINN 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H T + IDE F+ +N
Sbjct: 71 SKEILDHWTNKYRAVAIDEVNFL---------------------------------DNGI 97
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
V +S+ G V+V+ LD + R F L+ +A+ V+KL AVC
Sbjct: 98 FEV------------IDSLIVNGVRVIVSGLDMDYLRRPFGVTPGLLAIADEVKKLKAVC 145
Query: 332 MSCFRDAAFTKR 343
+ C DAAF+ R
Sbjct: 146 LLCKSDAAFSFR 157
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDID 74
+RI+ ++ A ++ + A D R+D +K+ + K A+S +++ H T
Sbjct: 24 ELLKRIKIFEIAEINTLVFKPAFDTRFDAKKIVSRTGAKTKAISINNSKEILDHWTNKYR 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+ IDE F + + +S+ G V+V+ LD + R F L+ +A+ V+KL A
Sbjct: 84 AVAIDEVNFLDNGIFEVIDSLIVNGVRVIVSGLDMDYLRRPFGVTPGLLAIADEVKKLKA 143
Query: 134 VCMSCFRDAAFTKR 147
VC+ C DAAF+ R
Sbjct: 144 VCLLCKSDAAFSFR 157
>gi|373453903|ref|ZP_09545789.1| hypothetical protein HMPREF0984_02831 [Eubacterium sp. 3_1_31]
gi|371962895|gb|EHO80471.1| hypothetical protein HMPREF0984_02831 [Eubacterium sp. 3_1_31]
Length = 201
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI+ +YA + + + D+RY E V +H + + + +
Sbjct: 11 EVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDNRYSEECVVSHAGSSVKSFNISK 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + D DVI IDE QF +
Sbjct: 71 AREIFDYIDDSYDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + A+ GK V+ A LD F+ F+ + L AE V KLTAVC
Sbjct: 95 ---------EEIVQICDYFADRGKRVMAAGLDMDFRGVPFSVMPELFTHAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A T+R+
Sbjct: 146 TKCGAPATRTQRL 158
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRI+ +YA + + + D+RY E V +H + + + + ++ + D DVI
Sbjct: 27 RRIKVLEYAKKKIAVFKPKIDNRYSEECVVSHAGSSVKSFNISKAREIFDYIDDSYDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + A+ GK V+ A LD F+ F+ + L AE V KLTAVC
Sbjct: 87 IDEVQFFDEEIVQICDYFADRGKRVMAAGLDMDFRGVPFSVMPELFTHAEFVTKLTAVCT 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGAPATRTQRL 158
>gi|448474439|ref|ZP_21602298.1| thymidine kinase [Halorubrum aidingense JCM 13560]
gi|445817746|gb|EMA67615.1| thymidine kinase [Halorubrum aidingense JCM 13560]
Length = 224
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 41/192 (21%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR + A + + A DDRY + TH+ ++ A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGTHNGRQWDA----- 65
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ + D + +D+ + EV+ I + F + A
Sbjct: 66 --RVVANEGDGPLAILDDDPYPEVVA------------------IDEANFFSNA------ 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V +A+ G V+V+ D TF+ F + L+ AE V+KL A+C
Sbjct: 100 ----------LVDVCNVLADNGVRVIVSGTDQTFRGEPFEPLPQLVATAEYVDKLQAICT 149
Query: 333 SCFRDAAFTKRI 344
C A+ +R+
Sbjct: 150 QCGEPASRNQRL 161
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKD-- 72
RR+RR + A + + A DDRY + TH+ ++ A V A E + + D
Sbjct: 24 ELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGTHNGRQWDARVVANEGDGPLAILDDDP 83
Query: 73 -IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+V+ IDE FF + +V +A+ G V+V+ D TF+ F + L+ AE V+K
Sbjct: 84 YPEVVAIDEANFFSNALVDVCNVLADNGVRVIVSGTDQTFRGEPFEPLPQLVATAEYVDK 143
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAK 188
L A+C C A+ +R+ + + P + T L+ Y+ C +VR +
Sbjct: 144 LQAICTQCGEPASRNQRLIEGE-----PAHTDDPTILVGAEESYEARCRDCHVVRTGE 196
>gi|85544232|pdb|2B8T|A Chain A, Crystal Structure Of Thymidine Kinase From U.Urealyticum
In Complex With Thymidine
gi|85544233|pdb|2B8T|B Chain B, Crystal Structure Of Thymidine Kinase From U.Urealyticum
In Complex With Thymidine
gi|85544234|pdb|2B8T|C Chain C, Crystal Structure Of Thymidine Kinase From U.Urealyticum
In Complex With Thymidine
gi|85544235|pdb|2B8T|D Chain D, Crystal Structure Of Thymidine Kinase From U.Urealyticum
In Complex With Thymidine
Length = 223
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 61/211 (28%)
Query: 143 AFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ 202
AF+K+IG E I GPMF+GKT ELIRR+ R +YA+ + ++ + + DT +
Sbjct: 6 AFSKKIGW-IEFITGPMFAGKTAELIRRLHRLEYADVKYLVFK----PKIDTRSIRNIQS 60
Query: 203 QKLTAVSAVE-------LNKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQ 253
+ T++ +VE LN ++ ++ + VIGIDE QF
Sbjct: 61 RTGTSLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQF-------------------- 100
Query: 254 KAPIKRSPFKTLANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFN 312
F D + A +A G +V+++ LD F+ F
Sbjct: 101 --------------------------FDDRICEVANILAENGFVVIISGLDKNFKGEPFG 134
Query: 313 DILSLIPLAECVEKLTAVCMSCFRDAAFTKR 343
I L A+ + KLTA+C C +A + R
Sbjct: 135 PIAKLFTYADKITKLTAICNECGAEATHSLR 165
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-------LNKLIPHT- 70
RR+ R +YA+ + ++ + + DT + + T++ +VE LN ++ ++
Sbjct: 31 RRLHRLEYADVKYLVFK----PKIDTRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSF 86
Query: 71 -KDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ VIGIDE QFF D + A +A G +V+++ LD F+ F I L A+ +
Sbjct: 87 NDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNFKGEPFGPIAKLFTYADKI 146
Query: 129 EKLTAVCMSCFRDAAFTKR 147
KLTA+C C +A + R
Sbjct: 147 TKLTAICNECGAEATHSLR 165
>gi|448578564|ref|ZP_21643984.1| thymidine kinase [Haloferax larsenii JCM 13917]
gi|445725742|gb|ELZ77362.1| thymidine kinase [Haloferax larsenii JCM 13917]
Length = 195
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR+RR + A + + DDRY V +H + A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRAEIAGQEVAVFKPELDDRYGETTVGSHVGRSWDASVVPS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ K+ DV+ IDE F F T
Sbjct: 71 EGDGVWKIHEQLNGEDVVAIDEANF----------------------------FST---- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E +A GK V+V+ D TF+ F + L+ LAE V+KL
Sbjct: 99 -------------ELVGVCEQLAADGKRVLVSGTDQTFRGEPFEPLPQLMALAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTVCGEPATRNQRL 161
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR + A + + DDRY V +H + A + K+
Sbjct: 25 LLRRLRRAEIAGQEVAVFKPELDDRYGETTVGSHVGRSWDASVVPSEGDGVWKIHEQLNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V E +A GK V+V+ D TF+ F + L+ LAE V+KL
Sbjct: 85 EDVVAIDEANFFSTELVGVCEQLAADGKRVLVSGTDQTFRGEPFEPLPQLMALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTVCGEPATRNQRL 161
>gi|149243935|pdb|2UZ3|A Chain A, Crystal Structure Of Thymidine Kinase With Dttp From U.
Urealyticum
gi|149243936|pdb|2UZ3|B Chain B, Crystal Structure Of Thymidine Kinase With Dttp From U.
Urealyticum
gi|149243937|pdb|2UZ3|C Chain C, Crystal Structure Of Thymidine Kinase With Dttp From U.
Urealyticum
gi|149243938|pdb|2UZ3|D Chain D, Crystal Structure Of Thymidine Kinase With Dttp From U.
Urealyticum
Length = 243
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 61/211 (28%)
Query: 143 AFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ 202
AF+K+IG E I GPMF+GKT ELIRR+ R +YA+ + ++ + + DT +
Sbjct: 26 AFSKKIGW-IEFITGPMFAGKTAELIRRLHRLEYADVKYLVFK----PKIDTRSIRNIQS 80
Query: 203 QKLTAVSAVE-------LNKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQ 253
+ T++ +VE LN ++ ++ + VIGIDE QF
Sbjct: 81 RTGTSLPSVEVESAPEILNYIMSNSFNDETKVIGIDEVQF-------------------- 120
Query: 254 KAPIKRSPFKTLANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFN 312
F D + A +A G +V+++ LD F+ F
Sbjct: 121 --------------------------FDDRICEVANILAENGFVVIISGLDKNFKGEPFG 154
Query: 313 DILSLIPLAECVEKLTAVCMSCFRDAAFTKR 343
I L A+ + KLTA+C C +A + R
Sbjct: 155 PIAKLFTYADKITKLTAICNECGAEATHSLR 185
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE-------LNKLIPHT- 70
RR+ R +YA+ + ++ + + DT + + T++ +VE LN ++ ++
Sbjct: 51 RRLHRLEYADVKYLVFK----PKIDTRSIRNIQSRTGTSLPSVEVESAPEILNYIMSNSF 106
Query: 71 -KDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 128
+ VIGIDE QFF D + A +A G +V+++ LD F+ F I L A+ +
Sbjct: 107 NDETKVIGIDEVQFFDDRICEVANILAENGFVVIISGLDKNFKGEPFGPIAKLFTYADKI 166
Query: 129 EKLTAVCMSCFRDAAFTKR 147
KLTA+C C +A + R
Sbjct: 167 TKLTAICNECGAEATHSLR 185
>gi|293399756|ref|ZP_06643902.1| thymidine kinase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306156|gb|EFE47399.1| thymidine kinase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 201
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI+ +YA + + + D+RY E V +H + + + +
Sbjct: 11 EVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPRIDNRYSEECVVSHAGSSVKSFNISK 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ + D DVI IDE QF +
Sbjct: 71 AREIFDYIDDSYDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + A+ GK V+ A LD F+ F+ + L AE V KLTAVC
Sbjct: 95 ---------EEIVQICDYFADRGKRVMAAGLDMDFRGVPFSVMPELFTHAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A T+R+
Sbjct: 146 TKCGAPATRTQRL 158
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRI+ +YA + + + D+RY E V +H + + + + ++ + D DVI
Sbjct: 27 RRIKVLEYAKKKIAVFKPRIDNRYSEECVVSHAGSSVKSFNISKAREIFDYIDDSYDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + A+ GK V+ A LD F+ F+ + L AE V KLTAVC
Sbjct: 87 IDEVQFFDEEIVQICDYFADRGKRVMAAGLDMDFRGVPFSVMPELFTHAEFVTKLTAVCT 146
Query: 137 SCFRDAAFTKRI 148
C A T+R+
Sbjct: 147 KCGAPATRTQRL 158
>gi|294508592|ref|YP_003572651.1| thymidine kinase [Salinibacter ruber M8]
gi|294344921|emb|CBH25699.1| thymidine kinase [Salinibacter ruber M8]
Length = 249
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFFPD-VVSFA 91
+ + A D+RY ++V +H++ +T ++ ++ DV+GIDE QFF D +V
Sbjct: 63 VFKPALDERYSEDEVVSHNENSVTTTPVEAPPQIQELVQEADVVGIDEAQFFDDDLVPTC 122
Query: 92 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI-GQ 150
+++A G V+V LD ++ F+ + L+ +AE V KL AVC+ C A ++RI
Sbjct: 123 QALAEDGHRVIVVGLDTDYRAEPFDPMPQLMAVAEHVTKLHAVCVVCGAPANHSQRIVPG 182
Query: 151 EKEVILG 157
E V++G
Sbjct: 183 EDRVLVG 189
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A + + A D+RY ++V +H++ +T
Sbjct: 33 EVICGSMFSGKTEELIRRLRRARIARQHTRVFKPALDERYSEDEVVSHNENSVTTTPVEA 92
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ ++ DV+GIDE QF +
Sbjct: 93 PPQIQELVQEADVVGIDEAQFFD------------------------------------- 115
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D+V +++A G V+V LD ++ F+ + L+ +AE V KL AVC+
Sbjct: 116 --------DDLVPTCQALAEDGHRVIVVGLDTDYRAEPFDPMPQLMAVAEHVTKLHAVCV 167
Query: 333 SCFRDAAFTKRI 344
C A ++RI
Sbjct: 168 VCGAPANHSQRI 179
>gi|448592386|ref|ZP_21651493.1| thymidine kinase [Haloferax elongans ATCC BAA-1513]
gi|445731391|gb|ELZ82975.1| thymidine kinase [Haloferax elongans ATCC BAA-1513]
Length = 195
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 82/196 (41%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
EVI G MFSGKT EL+RR+RR + A + + DDRY V +H + A V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRAEIAGQEVAVFKPELDDRYGETTVGSHVGRSWDASVVPS 70
Query: 212 ELNKLIPHTKDI---DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E + + + + DV+ IDE F S + +AVC
Sbjct: 71 EGDGIWEIHEQLNGEDVVAIDEANFF-----STELVAVC--------------------- 104
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
E +A GK V+++ D TF+ F + L+ LAE V+KL
Sbjct: 105 -------------------EQLAADGKRVLISGTDQTFRGEPFEPLPQLMALAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTVCGEPATRNQRL 161
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDI-- 73
RR+RR + A + + DDRY V +H + A V E + + + +
Sbjct: 25 LLRRLRRAEIAGQEVAVFKPELDDRYGETTVGSHVGRSWDASVVPSEGDGIWEIHEQLNG 84
Query: 74 -DVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V+ E +A GK V+++ D TF+ F + L+ LAE V+KL
Sbjct: 85 EDVVAIDEANFFSTELVAVCEQLAADGKRVLISGTDQTFRGEPFEPLPQLMALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTVCGEPATRNQRL 161
>gi|83815838|ref|YP_446657.1| thymidine kinase [Salinibacter ruber DSM 13855]
gi|109892491|sp|Q2RZH4.1|KITH_SALRD RecName: Full=Thymidine kinase
gi|83757232|gb|ABC45345.1| thymidine kinase [Salinibacter ruber DSM 13855]
Length = 227
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFFPD-VVSFA 91
+ + A D+RY ++V +H++ +T ++ ++ DV+GIDE QFF D +V
Sbjct: 41 VFKPALDERYSEDEVVSHNENSVTTTPVEAPPQIQELVQEADVVGIDEAQFFDDDLVPTC 100
Query: 92 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI-GQ 150
+++A G V+V LD ++ F+ + L+ +AE V KL AVC+ C A ++RI
Sbjct: 101 QALAEDGHRVIVVGLDTDYRAEPFDPMPQLMAVAEHVTKLHAVCVVCGAPANHSQRIVPG 160
Query: 151 EKEVILG 157
E V++G
Sbjct: 161 EDRVLVG 167
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 45/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT ELIRR+RR + A + + A D+RY ++V +H++ +T
Sbjct: 11 EVICGSMFSGKTEELIRRLRRARIARQHTRVFKPALDERYSEDEVVSHNENSVTTTPVEA 70
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ ++ DV+GIDE QF +
Sbjct: 71 PPQIQELVQEADVVGIDEAQFFD------------------------------------- 93
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D+V +++A G V+V LD ++ F+ + L+ +AE V KL AVC+
Sbjct: 94 --------DDLVPTCQALAEDGHRVIVVGLDTDYRAEPFDPMPQLMAVAEHVTKLHAVCV 145
Query: 333 SCFRDAAFTKRI 344
C A ++RI
Sbjct: 146 VCGAPANHSQRI 157
>gi|448546437|ref|ZP_21626601.1| thymidine kinase [Haloferax sp. ATCC BAA-646]
gi|448548474|ref|ZP_21627693.1| thymidine kinase [Haloferax sp. ATCC BAA-645]
gi|448557823|ref|ZP_21632809.1| thymidine kinase [Haloferax sp. ATCC BAA-644]
gi|445702890|gb|ELZ54830.1| thymidine kinase [Haloferax sp. ATCC BAA-646]
gi|445713960|gb|ELZ65731.1| thymidine kinase [Haloferax sp. ATCC BAA-644]
gi|445714232|gb|ELZ65997.1| thymidine kinase [Haloferax sp. ATCC BAA-645]
Length = 195
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR+RR + A + + DDRY V +H + A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRAEIAGQDISVFKPQLDDRYGETTVGSHAGRSWEASVVPS 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ ++ DV+ IDE F
Sbjct: 71 EGEGVWQIAEELNGEDVVAIDEANFFSA-------------------------------- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E++A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 99 -------------ELVDVCEALAADGKRVVVSGTDQTFRAEPFDPLPQLMALAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTICGEPATRNQRL 161
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR + A + + DDRY V +H + A + ++
Sbjct: 25 LLRRLRRAEIAGQDISVFKPQLDDRYGETTVGSHAGRSWEASVVPSEGEGVWQIAEELNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE FF ++V E++A GK VVV+ D TF+ F+ + L+ LAE V+KL
Sbjct: 85 EDVVAIDEANFFSAELVDVCEALAADGKRVVVSGTDQTFRAEPFDPLPQLMALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTICGEPATRNQRL 161
>gi|187251427|ref|YP_001875909.1| thymidine kinase [Elusimicrobium minutum Pei191]
gi|186971587|gb|ACC98572.1| Thymidine kinase [Elusimicrobium minutum Pei191]
Length = 186
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 53/209 (25%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
+TK+ G+ EVI G MFSGK+ ELI R+R+ + A + + + D RY +++H++
Sbjct: 4 YTKKQGRI-EVICGCMFSGKSEELINRLRKAKIAKQKIQVFNSSLDKRYACNAIASHNKT 62
Query: 204 KLTAV---SAVELNKLI-PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
KL + +A E+ KL+ P T V+ +DEG F +
Sbjct: 63 KLESEHVNTASEILKLVKPST---TVVAVDEGNFFD------------------------ 95
Query: 260 SPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIP 319
KTL V E++A GK V+V+ +D + F + L+
Sbjct: 96 ---KTL------------------VDVCETLAQKGKRVIVSGVDLDYTGKPFEAMALLMA 134
Query: 320 LAECVEKLTAVCMSCFRDAAFTKRIGQEK 348
AE V K AVC C A+ T+RI + K
Sbjct: 135 KAEFVTKNLAVCTKCGSPASRTQRIAKAK 163
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 20 RIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLI-PHTKDIDV 75
R+R+ + A + + + D RY +A+H++ KL + +A E+ KL+ P T V
Sbjct: 29 RLRKAKIAKQKIQVFNSSLDKRYACNAIASHNKTKLESEHVNTASEILKLVKPST---TV 85
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ +DEG FF +V E++A GK V+V+ +D + F + L+ AE V K AV
Sbjct: 86 VAVDEGNFFDKTLVDVCETLAQKGKRVIVSGVDLDYTGKPFEAMALLMAKAEFVTKNLAV 145
Query: 135 CMSCFRDAAFTKRIGQEKEVIL 156
C C A+ T+RI + K IL
Sbjct: 146 CTKCGSPASRTQRIAKAKSRIL 167
>gi|347449356|gb|AEO93397.1| gp135 [Bacillus phage G]
Length = 184
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQ-QKLTAVSAVELNKLIPHTK-DIDVI 76
RR++R +AN + + + D+RY KV THD+ +L+A+S +LI + D V+
Sbjct: 24 RRLKRCSFANIKFQLFKPEIDNRYSENKVVTHDKDSQLSALSVSTPKELISLVESDTTVV 83
Query: 77 GIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
GIDE QFF + +V E + G VV A LD F L+ A+ V KL AVC
Sbjct: 84 GIDEVQFFDETIVEVIEQLNEKGIRVVAAGLDMYSTGEPFGSTGILMAKAKYVSKLHAVC 143
Query: 136 MSCFRDAAFTKRIGQ 150
+ C +A +K I +
Sbjct: 144 VVCGNNAYISKAISE 158
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 83/196 (42%), Gaps = 47/196 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ-QKLTAVSAV 211
E+I G M+SGK+ ELIRR++R +AN + + + D+RY KV THD+ +L+A+S
Sbjct: 8 EIISGGMYSGKSEELIRRLKRCSFANIKFQLFKPEIDNRYSENKVVTHDKDSQLSALSVS 67
Query: 212 ELNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+LI + D V+GIDE QF +
Sbjct: 68 TPKELISLVESDTTVVGIDEVQFFD----------------------------------- 92
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
+V E + G VV A LD F L+ A+ V KL AV
Sbjct: 93 ----------ETIVEVIEQLNEKGIRVVAAGLDMYSTGEPFGSTGILMAKAKYVSKLHAV 142
Query: 331 CMSCFRDAAFTKRIGQ 346
C+ C +A +K I +
Sbjct: 143 CVVCGNNAYISKAISE 158
>gi|193216554|ref|YP_001999796.1| thymidine kinase [Mycoplasma arthritidis 158L3-1]
gi|238692474|sp|B3PM40.1|KITH_MYCA5 RecName: Full=Thymidine kinase
gi|193001877|gb|ACF07092.1| thymidine kinase [Mycoplasma arthritidis 158L3-1]
Length = 194
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 43/191 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+ EL++RIR +YA + ++++ D R+ ++ +
Sbjct: 11 EVITGPMFSGKSEELLKRIRTLEYAKLKPLVIKPEFDTRFSENEIVSRAG---------- 60
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ H I + I++ F + DKY AV + +E
Sbjct: 61 ----VKHKTHI-LKNINDVYF---LLQEDKYKAV------------------VIDEAHWF 94
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
N ++V A+ +AN G +V+VA LD + R F I +L+ +AE V KL A+C+
Sbjct: 95 N-------EELVKVADDLANKGYLVIVAGLDQNYLREPFGPIPNLLAIAERVTKLQAICV 147
Query: 333 SCFRDAAFTKR 343
C A+ + R
Sbjct: 148 KCQHAASTSFR 158
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVAT-----HDQQKLTAVSAVELNKLIPHTK 71
+RIR +YA + ++++ D R+ ++ + H L ++ V L+ K
Sbjct: 25 LLKRIRTLEYAKLKPLVIKPEFDTRFSENEIVSRAGVKHKTHILKNINDVYF--LLQEDK 82
Query: 72 DIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
V+ IDE +F ++V A+ +AN G +V+VA LD + R F I +L+ +AE V K
Sbjct: 83 YKAVV-IDEAHWFNEELVKVADDLANKGYLVIVAGLDQNYLREPFGPIPNLLAIAERVTK 141
Query: 131 LTAVCMSCFRDAAFTKR 147
L A+C+ C A+ + R
Sbjct: 142 LQAICVKCQHAASTSFR 158
>gi|308800436|ref|XP_003074999.1| Putative thymidine kinase (ISS) [Ostreococcus tauri]
gi|116061552|emb|CAL52270.1| Putative thymidine kinase (ISS) [Ostreococcus tauri]
Length = 283
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 74 DVIGIDEGQFFPDVVSFA-ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ +DE QF P ++ FA E G+IV +A LDG ++R F ++L LIP+ + V +L
Sbjct: 165 DVVAVDEAQFMPGLIDFALECAEKRGQIVYIAGLDGDYRRRRFGEVLDLIPMCDSVTRLR 224
Query: 133 AVCMSCFRDAAFTKRI 148
C C R ++F++R+
Sbjct: 225 GTCAECGRASSFSRRV 240
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 33/206 (16%)
Query: 147 RIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLT 206
R+G E VI GPMF+GKT+ L R++ + + + S+ + ++
Sbjct: 60 RVG-EIHVITGPMFAGKTSALARKLATARSSGNAVFAI------------TSSLEAERFG 106
Query: 207 AVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
A + L T D D DE I G D A R + T A
Sbjct: 107 ARAETSL-----VTHDGDAFTGDEEGVCNTIEGCDFGEARVRAIGTENG-------WTFA 154
Query: 267 NENA-------ALNVPPPPEFPDVVSFA-ESMANAGKIVVVAALDGTFQRTGFNDILSLI 318
+E+A + V P ++ FA E G+IV +A LDG ++R F ++L LI
Sbjct: 155 SEDAKALERADVVAVDEAQFMPGLIDFALECAEKRGQIVYIAGLDGDYRRRRFGEVLDLI 214
Query: 319 PLAECVEKLTAVCMSCFRDAAFTKRI 344
P+ + V +L C C R ++F++R+
Sbjct: 215 PMCDSVTRLRGTCAECGRASSFSRRV 240
>gi|342215606|ref|ZP_08708253.1| putative thymidine kinase [Peptoniphilus sp. oral taxon 375 str.
F0436]
gi|341586496|gb|EGS29896.1| putative thymidine kinase [Peptoniphilus sp. oral taxon 375 str.
F0436]
Length = 190
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 44/189 (23%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + ++R+ A Y+ + D R ++ +HDQ+ A ++ L
Sbjct: 13 GSMFSGKTSSLEKDLKRFSIAGYKVCAFKPRMDSRCGENEIMSHDQEVTHAYPLDNIDDL 72
Query: 217 --IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ KD+DV+GIDE QF++ R P +
Sbjct: 73 EAMVQEKDLDVVGIDEIQFID-----------------------RDPQR----------- 98
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
VV + + G ++VA LD +Q+ F I L+P A+ V K AVC C
Sbjct: 99 --------VVEVLFRILDQGITIIVAGLDMDYQKVPFEIIKELMPRADYVHKHHAVCTCC 150
Query: 335 FRDAAFTKR 343
DA + R
Sbjct: 151 GSDAWVSHR 159
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHTKDIDVI 76
+ ++R+ A Y+ + D R ++ +HDQ+ A ++ L + KD+DV+
Sbjct: 25 KDLKRFSIAGYKVCAFKPRMDSRCGENEIMSHDQEVTHAYPLDNIDDLEAMVQEKDLDVV 84
Query: 77 GIDEGQFF----PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
GIDE QF VV + + G ++VA LD +Q+ F I L+P A+ V K
Sbjct: 85 GIDEIQFIDRDPQRVVEVLFRILDQGITIIVAGLDMDYQKVPFEIIKELMPRADYVHKHH 144
Query: 133 AVCMSCFRDAAFTKR-IGQEKEVILGPM 159
AVC C DA + R + V+LG +
Sbjct: 145 AVCTCCGSDAWVSHRKSSKTSRVVLGAI 172
>gi|399576528|ref|ZP_10770283.1| thymidine kinase [Halogranum salarium B-1]
gi|399237972|gb|EJN58901.1| thymidine kinase [Halogranum salarium B-1]
Length = 195
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
EVI G MFSGKT EL+RR+RR + A + + DDRY + +H+ ++ A V
Sbjct: 11 EVITGSMFSGKTEELLRRLRRAEIAEQEVAVFKPDVDDRYGEATIGSHNGRQWEAHVVDA 70
Query: 212 ELNKLIPHTKDID---VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E + +D V+ +DE F F T
Sbjct: 71 EGEGIWDIYDKLDGEKVVAVDEANF----------------------------FST---- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E++A G+ V+V+ D TF+ F + LI LAE V+KL
Sbjct: 99 -------------ELVDVCEALAADGRRVIVSGTDQTFRAEPFEPVPQLIALAEYVDKLR 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTVCGEPATRNQRL 161
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKDID- 74
RR+RR + A + + DDRY + +H+ ++ A V E + +D
Sbjct: 25 LLRRLRRAEIAEQEVAVFKPDVDDRYGEATIGSHNGRQWEAHVVDAEGEGIWDIYDKLDG 84
Query: 75 --VIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
V+ +DE FF ++V E++A G+ V+V+ D TF+ F + LI LAE V+KL
Sbjct: 85 EKVVAVDEANFFSTELVDVCEALAADGRRVIVSGTDQTFRAEPFEPVPQLIALAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 RAICTVCGEPATRNQRL 161
>gi|352681583|ref|YP_004892107.1| thymidine kinase [Thermoproteus tenax Kra 1]
gi|350274382|emb|CCC81027.1| Thymidine kinase [Thermoproteus tenax Kra 1]
Length = 178
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 50/194 (25%)
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELN 214
I+GPMF+GKTTELIR + R A R ++ + DDRYD + V+ H+ K AV
Sbjct: 5 IVGPMFAGKTTELIRLVERQVIAGRRAIVFKPTIDDRYDPDAVAAHNGAKYKAVRVAPDE 64
Query: 215 KLIPHTKDID----VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ K++ V+ +DE QF
Sbjct: 65 SGVGAIKELSASYQVVAVDEVQFF------------------------------------ 88
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
PP +V++ +A+ K+VV A L+ ++ F + ++ A+ V LTAV
Sbjct: 89 ------PPSLAEVLN---ELADE-KLVVAAGLNLDYRGQPFETTMRIMAYADKVVSLTAV 138
Query: 331 CMSCFRDAAFTKRI 344
C C R A T+R+
Sbjct: 139 CTVCGRPATRTQRL 152
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDID-- 74
R + R A R ++ + DDRYD + VA H+ K AV + K++
Sbjct: 17 LIRLVERQVIAGRRAIVFKPTIDDRYDPDAVAAHNGAKYKAVRVAPDESGVGAIKELSAS 76
Query: 75 --VIGIDEGQFFPDVVSFAESMANAG--KIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
V+ +DE QFFP S AE + K+VV A L+ ++ F + ++ A+ V
Sbjct: 77 YQVVAVDEVQFFPP--SLAEVLNELADEKLVVAAGLNLDYRGQPFETTMRIMAYADKVVS 134
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVILG 157
LTAVC C R A T+R+ + +G
Sbjct: 135 LTAVCTVCGRPATRTQRLAPGPRIYVG 161
>gi|222479987|ref|YP_002566224.1| thymidine kinase [Halorubrum lacusprofundi ATCC 49239]
gi|222452889|gb|ACM57154.1| thymidine kinase [Halorubrum lacusprofundi ATCC 49239]
Length = 229
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
EVI G MFSGKT EL+RR+RR + A + + A DDRY + +H+ ++ A V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWEATVVDN 70
Query: 212 ELNKLIPHTKD---IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E + D +V+ IDE F SD + VC
Sbjct: 71 EGGGPLAILDDEPFPEVVAIDEANFF-----SDALVEVCN-------------------- 105
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++A+ G V+V+ D TF+ F + L+ AE V+KL
Sbjct: 106 --------------------ALADNGTRVIVSGTDQTFRGEPFEPLPELMATAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A+ +R+
Sbjct: 146 AICSQCGEPASRNQRL 161
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKD-- 72
RR+RR + A + + A DDRY + +H+ ++ A V E + D
Sbjct: 24 ELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWEATVVDNEGGGPLAILDDEP 83
Query: 73 -IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+V+ IDE FF D +V ++A+ G V+V+ D TF+ F + L+ AE V+K
Sbjct: 84 FPEVVAIDEANFFSDALVEVCNALADNGTRVIVSGTDQTFRGEPFEPLPELMATAEYVDK 143
Query: 131 LTAVCMSCFRDAAFTKRI 148
L A+C C A+ +R+
Sbjct: 144 LQAICSQCGEPASRNQRL 161
>gi|343521126|ref|ZP_08758094.1| thymidine kinase [Parvimonas sp. oral taxon 393 str. F0440]
gi|343396332|gb|EGV08869.1| thymidine kinase [Parvimonas sp. oral taxon 393 str. F0440]
Length = 203
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 44/195 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R++ A Y ++ + D+RY +++ THD K+ A+ +++++
Sbjct: 13 GSMFSGKTSSLWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNTKMRAIPVEDIDEI 72
Query: 217 IPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
I + T +IGIDE QF++ G +K + LN+
Sbjct: 73 IEYMKTSTASIIGIDEVQFIK--GDINKIV-------------------------ETLNL 105
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
EF VV+A LD F+ F + L+P A+ + K AVC +C
Sbjct: 106 FLENEFT---------------VVLAGLDMDFKAEPFELVKELMPRADYLYKHHAVCANC 150
Query: 335 FRDAAFTKRIGQEKE 349
DA + R + E
Sbjct: 151 GVDAWVSYRKTHDDE 165
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH--TKDID 74
+ + R++ A Y ++ + D+RY +++ THD K+ A+ +++++I + T
Sbjct: 23 LWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNTKMRAIPVEDIDEIIEYMKTSTAS 82
Query: 75 VIGIDEGQFFP-DVVSFAESM---ANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+IGIDE QF D+ E++ VV+A LD F+ F + L+P A+ + K
Sbjct: 83 IIGIDEVQFIKGDINKIVETLNLFLENEFTVVLAGLDMDFKAEPFELVKELMPRADYLYK 142
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVI 155
AVC +C DA + R + E I
Sbjct: 143 HHAVCANCGVDAWVSYRKTHDDERI 167
>gi|448440050|ref|ZP_21588298.1| thymidine kinase [Halorubrum saccharovorum DSM 1137]
gi|445690567|gb|ELZ42777.1| thymidine kinase [Halorubrum saccharovorum DSM 1137]
Length = 208
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 41/192 (21%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR + A + + A DDRY + +H+ ++ A
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWDAT---- 66
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ + D + +D+ + EV+ I + F + A
Sbjct: 67 ---VVDNEGDGPLAILDDDPYPEVVA------------------IDEANFFSDA------ 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+V ++A+ G V+V+ D TF+ F + L+ AE V+KL A+C
Sbjct: 100 ----------LVKVCNALADNGTRVIVSGTDQTFRGEPFEPLPELMATAEYVDKLQAICS 149
Query: 333 SCFRDAAFTKRI 344
C A+ +R+
Sbjct: 150 QCGEPASRNQRL 161
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKD--- 72
RR+RR + A + + A DDRY + +H+ ++ A V E + + D
Sbjct: 25 LLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWDATVVDNEGDGPLAILDDDPY 84
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+ IDE FF D +V ++A+ G V+V+ D TF+ F + L+ AE V+KL
Sbjct: 85 PEVVAIDEANFFSDALVKVCNALADNGTRVIVSGTDQTFRGEPFEPLPELMATAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 145 QAICSQCGEPASRNQRL 161
>gi|160947737|ref|ZP_02094904.1| hypothetical protein PEPMIC_01672 [Parvimonas micra ATCC 33270]
gi|158446871|gb|EDP23866.1| thymidine kinase [Parvimonas micra ATCC 33270]
Length = 203
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 44/195 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R++ A Y ++ + D+RY +++ THD K+ A+ ++++
Sbjct: 13 GSMFSGKTSSLWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNNKMRAIPVENIDEI 72
Query: 217 IPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
I + T +IGIDE QF++ G +K + LN+
Sbjct: 73 IEYMKTSTASIIGIDEVQFIK--GDINKIV-------------------------ETLNL 105
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
EF VV+A LD F+ F + L+P A+ + K AVC +C
Sbjct: 106 FLENEFT---------------VVLAGLDMDFKAEPFELVKELMPRADYLYKHHAVCANC 150
Query: 335 FRDAAFTKRIGQEKE 349
DA + R + E
Sbjct: 151 GVDAWVSYRKTHDDE 165
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH--TKDID 74
+ + R++ A Y ++ + D+RY +++ THD K+ A+ ++++I + T
Sbjct: 23 LWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNNKMRAIPVENIDEIIEYMKTSTAS 82
Query: 75 VIGIDEGQFFP-DVVSFAESM---ANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+IGIDE QF D+ E++ VV+A LD F+ F + L+P A+ + K
Sbjct: 83 IIGIDEVQFIKGDINKIVETLNLFLENEFTVVLAGLDMDFKAEPFELVKELMPRADYLYK 142
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVI 155
AVC +C DA + R + E I
Sbjct: 143 HHAVCANCGVDAWVSYRKTHDDERI 167
>gi|354610783|ref|ZP_09028739.1| Thymidine kinase [Halobacterium sp. DL1]
gi|353195603|gb|EHB61105.1| Thymidine kinase [Halobacterium sp. DL1]
Length = 195
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 81/197 (41%), Gaps = 51/197 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGKT EL+RR+RR + A A DDRY + +H + A +
Sbjct: 11 EVITGSMFSGKTEELLRRLRRAEIAGQEVAAFTPAIDDRYGEATLGSHAGRTWEATVVET 70
Query: 210 AVELNKLIPHTKDID-VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ + IP + + V+ IDE F
Sbjct: 71 TADGVEAIPDDLNGEQVVAIDEANF----------------------------------- 95
Query: 269 NAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
FP D+V+ + +A G+ VVV+ D TF+ F+ I L+ +AE VEK
Sbjct: 96 -----------FPGDLVAVCQELAADGRRVVVSGTDQTFRGEPFDPIPQLMAVAEYVEKF 144
Query: 328 TAVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 145 RAICTQCGEPATRNQRL 161
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDID- 74
RR+RR + A A DDRY + +H + A + + + IP + +
Sbjct: 27 RRLRRAEIAGQEVAAFTPAIDDRYGEATLGSHAGRTWEATVVETTADGVEAIPDDLNGEQ 86
Query: 75 VIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+ IDE FFP D+V+ + +A G+ VVV+ D TF+ F+ I L+ +AE VEK A
Sbjct: 87 VVAIDEANFFPGDLVAVCQELAADGRRVVVSGTDQTFRGEPFDPIPQLMAVAEYVEKFRA 146
Query: 134 VCMSCFRDAAFTKRI 148
+C C A +R+
Sbjct: 147 ICTQCGEPATRNQRL 161
>gi|333372742|ref|ZP_08464666.1| thymidine kinase [Desmospora sp. 8437]
gi|332971804|gb|EGK10752.1| thymidine kinase [Desmospora sp. 8437]
Length = 202
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 3/130 (2%)
Query: 33 IVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIGIDEGQFF-PDVVSF 90
+ + A D RY +E V +H+ A ++ H + +IDV+ +DE QFF ++V
Sbjct: 41 VFKPAVDTRYRSEAVTSHNGIYTDATVLSRAVHILDHVSAEIDVVAVDEVQFFDEEIVHV 100
Query: 91 AESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI-G 149
A+++A+ G VV A LD F+ F +L+ +AE V KL A+C+ C A T+R+ G
Sbjct: 101 AQTLADRGIRVVCAGLDQDFRGVPFGPTPNLMAVAEYVTKLQAICVRCGNPAGRTQRLAG 160
Query: 150 QEKEVILGPM 159
+E + GP+
Sbjct: 161 EEPAGVDGPV 170
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 46/202 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+RR + A R + + A D RY +E V++H+ A
Sbjct: 11 EVICGGMFSGKSEELIRRVRRARIARQRVAVFKPAVDTRYRSEAVTSHNGIYTDATVLSR 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++ H + +IDV+ +DE QF +
Sbjct: 71 AVHILDHVSAEIDVVAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V A+++A+ G VV A LD F+ F +L+ +AE V KL A+C
Sbjct: 95 ---------EEIVHVAQTLADRGIRVVCAGLDQDFRGVPFGPTPNLMAVAEYVTKLQAIC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
+ C A T+R+ E+ ++
Sbjct: 146 VRCGNPAGRTQRLAGEEPAGVD 167
>gi|346315167|ref|ZP_08856683.1| thymidine kinase [Erysipelotrichaceae bacterium 2_2_44A]
gi|345905267|gb|EGX75007.1| thymidine kinase [Erysipelotrichaceae bacterium 2_2_44A]
Length = 197
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 81/193 (41%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI+ +YA + + + DDRY E V +H +
Sbjct: 11 EVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDDRYSEECVVSHCGSTAKSFVINR 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + D DVI IDE QF +
Sbjct: 71 AHEIFDYIDDSYDVIAIDEVQFFDA----------------------------------- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + A+ GK V+VA LD F+ F+ + L AE V KLTAVC
Sbjct: 96 ----------EIVEICDYFADHGKRVMVAGLDMDFRGEPFSVMPQLFTHAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A ++R+
Sbjct: 146 TICGAPATRSQRL 158
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRI+ +YA + + + DDRY E V +H + +++ + D DVI
Sbjct: 27 RRIKVLEYAKKKIAVFKPKIDDRYSEECVVSHCGSTAKSFVINRAHEIFDYIDDSYDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + A+ GK V+VA LD F+ F+ + L AE V KLTAVC
Sbjct: 87 IDEVQFFDAEIVEICDYFADHGKRVMVAGLDMDFRGEPFSVMPQLFTHAEFVTKLTAVCT 146
Query: 137 SCFRDAAFTKRI 148
C A ++R+
Sbjct: 147 ICGAPATRSQRL 158
>gi|313899013|ref|ZP_07832540.1| thymidine kinase [Clostridium sp. HGF2]
gi|373123799|ref|ZP_09537643.1| hypothetical protein HMPREF0982_02572 [Erysipelotrichaceae
bacterium 21_3]
gi|422328568|ref|ZP_16409594.1| hypothetical protein HMPREF0981_02914 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312956212|gb|EFR37853.1| thymidine kinase [Clostridium sp. HGF2]
gi|371660065|gb|EHO25323.1| hypothetical protein HMPREF0981_02914 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371660494|gb|EHO25745.1| hypothetical protein HMPREF0982_02572 [Erysipelotrichaceae
bacterium 21_3]
Length = 197
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 81/193 (41%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI+ +YA + + + DDRY E V +H +
Sbjct: 11 EVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDDRYSEECVVSHCGSTAKSFVINR 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + D DVI IDE QF +
Sbjct: 71 AHEIFDYIDDSYDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + A+ GK V+VA LD F+ F+ + L AE V KLTAVC
Sbjct: 95 ---------EEIVEICDYFADHGKRVMVAGLDMDFRGEPFSVMPQLFTHAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A ++R+
Sbjct: 146 TICGAPATRSQRL 158
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRI+ +YA + + + DDRY E V +H + +++ + D DVI
Sbjct: 27 RRIKVLEYAKKKIAVFKPKIDDRYSEECVVSHCGSTAKSFVINRAHEIFDYIDDSYDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + A+ GK V+VA LD F+ F+ + L AE V KLTAVC
Sbjct: 87 IDEVQFFDEEIVEICDYFADHGKRVMVAGLDMDFRGEPFSVMPQLFTHAEFVTKLTAVCT 146
Query: 137 SCFRDAAFTKRI 148
C A ++R+
Sbjct: 147 ICGAPATRSQRL 158
>gi|309777875|ref|ZP_07672820.1| thymidine kinase [Erysipelotrichaceae bacterium 3_1_53]
gi|308914359|gb|EFP60154.1| thymidine kinase [Erysipelotrichaceae bacterium 3_1_53]
Length = 198
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MF+GKT ELIRRI+ +YA + + + DDRY + V +H +
Sbjct: 11 EVISGCMFAGKTEELIRRIKVLEYAKKKIAVFKPKIDDRYSEDCVVSHCGSTAKSFVISR 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + D DVI IDE QF +
Sbjct: 71 AHEIFDYIDDSYDVIAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V + A+ GK V+VA LD F+ F+ + L AE V KLTAVC
Sbjct: 95 ---------EEIVEICDYFADHGKRVMVAGLDMDFRGEPFSVMPQLFTHAEFVTKLTAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A ++R+
Sbjct: 146 TKCGAPATRSQRL 158
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RRI+ +YA + + + DDRY + V +H + +++ + D DVI
Sbjct: 27 RRIKVLEYAKKKIAVFKPKIDDRYSEDCVVSHCGSTAKSFVISRAHEIFDYIDDSYDVIA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF ++V + A+ GK V+VA LD F+ F+ + L AE V KLTAVC
Sbjct: 87 IDEVQFFDEEIVEICDYFADHGKRVMVAGLDMDFRGEPFSVMPQLFTHAEFVTKLTAVCT 146
Query: 137 SCFRDAAFTKRI 148
C A ++R+
Sbjct: 147 KCGAPATRSQRL 158
>gi|335047228|ref|ZP_08540249.1| thymidine kinase [Parvimonas sp. oral taxon 110 str. F0139]
gi|333761036|gb|EGL38591.1| thymidine kinase [Parvimonas sp. oral taxon 110 str. F0139]
Length = 203
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 44/195 (22%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R++ A Y ++ + D+RY +++ THD K+ A+ ++++
Sbjct: 13 GSMFSGKTSSLWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNNKMRAIPVENIDEI 72
Query: 217 IPH--TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
I + T +IGIDE QF++ G +K + LN+
Sbjct: 73 IEYMKTSTASIIGIDEVQFIK--GDINKIV-------------------------ETLNL 105
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
EF V++A LD F+ F + L+P A+ + K AVC +C
Sbjct: 106 FLENEFT---------------VILAGLDMDFKAEPFELVKELMPRADYLYKHHAVCANC 150
Query: 335 FRDAAFTKRIGQEKE 349
DA + R + E
Sbjct: 151 GVDAWVSYRKTHDDE 165
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH--TKDID 74
+ + R++ A Y ++ + D+RY +++ THD K+ A+ ++++I + T
Sbjct: 23 LWKDLNRFEIAKYETVVFKPKFDNRYADKEIVTHDNNKMRAIPVENIDEIIEYMKTSTAS 82
Query: 75 VIGIDEGQFFP-DVVSFAESM---ANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+IGIDE QF D+ E++ V++A LD F+ F + L+P A+ + K
Sbjct: 83 IIGIDEVQFIKGDINKIVETLNLFLENEFTVILAGLDMDFKAEPFELVKELMPRADYLYK 142
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVI 155
AVC +C DA + R + E I
Sbjct: 143 HHAVCANCGVDAWVSYRKTHDDERI 167
>gi|448454574|ref|ZP_21594127.1| thymidine kinase [Halorubrum lipolyticum DSM 21995]
gi|445814661|gb|EMA64620.1| thymidine kinase [Halorubrum lipolyticum DSM 21995]
Length = 208
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
EVI G MFSGKT EL+RR+RR + A + + A DDRY + +H+ ++ A V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWEATVVDN 70
Query: 212 ELNKLIPHTKD---IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E + + D +V+ +DE F SD + VC
Sbjct: 71 EGDGPLAILDDEPYPEVVAVDEANFF-----SDALVEVCN-------------------- 105
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++A+ G V+V+ D TF+ F + L+ AE V+KL
Sbjct: 106 --------------------ALADNGARVIVSGTDQTFRGEPFEPLPELMATAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A+ +R+
Sbjct: 146 AICSQCGEPASRNQRL 161
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTKD--- 72
RR+RR + A + + A DDRY + +H+ ++ A V E + + D
Sbjct: 25 LLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHNGRQWEATVVDNEGDGPLAILDDEPY 84
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+ +DE FF D +V ++A+ G V+V+ D TF+ F + L+ AE V+KL
Sbjct: 85 PEVVAVDEANFFSDALVEVCNALADNGARVIVSGTDQTFRGEPFEPLPELMATAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 145 QAICSQCGEPASRNQRL 161
>gi|242399572|ref|YP_002994997.1| Thymidine kinase [Thermococcus sibiricus MM 739]
gi|242265966|gb|ACS90648.1| Thymidine kinase [Thermococcus sibiricus MM 739]
Length = 196
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 53/199 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI GPMF+GKT+ELI+RI R +A + + + + D+RY +K+ H+ A +
Sbjct: 12 EVITGPMFAGKTSELIKRIERQIFAKRKAALFKPSIDNRYSEDKLVAHNGLSYEAFVIPT 71
Query: 210 AVELNKLI---PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
E K+I + +VIGIDE QF
Sbjct: 72 TEEGVKMIYQKTKKEGFEVIGIDEVQF--------------------------------- 98
Query: 267 NENAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FP +V + +A+ G V+ + L+ F+ F L+ +A+ +
Sbjct: 99 -------------FPMSIVEILDKLADEGIYVIASGLNLDFKGDAFEVTKELLAMADNIV 145
Query: 326 KLTAVCMSCFRDAAFTKRI 344
LTA+C C R+A T+R+
Sbjct: 146 YLTAICSVCGREATRTQRL 164
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLI---PHT 70
+RI R +A + + + + D+RY +K+ H+ A + E K+I
Sbjct: 26 LIKRIERQIFAKRKAALFKPSIDNRYSEDKLVAHNGLSYEAFVIPTTEEGVKMIYQKTKK 85
Query: 71 KDIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
+ +VIGIDE QFFP +V + +A+ G V+ + L+ F+ F L+ +A+ +
Sbjct: 86 EGFEVIGIDEVQFFPMSIVEILDKLADEGIYVIASGLNLDFKGDAFEVTKELLAMADNIV 145
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTA+C C R+A T+R+
Sbjct: 146 YLTAICSVCGREATRTQRL 164
>gi|260909078|gb|ACX54176.1| chimeric thymidine kinase/thymidylate kinase [White spot syndrome
virus]
Length = 262
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 56 TAVSAV-ELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTG 114
T VS++ EL ++P +DVI IDEGQFF D+V +A+ GK +V+AALDGT +
Sbjct: 10 TTVSSIKELISVLPEV--VDVILIDEGQFFTDLV-LVNRLADKGKRIVIAALDGTSDQQM 66
Query: 115 FNDILSLIPLAECVEKLTAVCMSC---FRDAAFTKRIGQEKE 153
F+ I L+P + KL + CM C ++A FT R G + +
Sbjct: 67 FSPIHKLLPYTNSIVKLASKCMICKIDTKEAPFTVRFGNDND 108
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC---FR 336
F D+V +A+ GK +V+AALDGT + F+ I L+P + KL + CM C +
Sbjct: 37 FTDLV-LVNRLADKGKRIVIAALDGTSDQQMFSPIHKLLPYTNSIVKLASKCMICKIDTK 95
Query: 337 DAAFTKRIGQEKE 349
+A FT R G + +
Sbjct: 96 EAPFTVRFGNDND 108
>gi|15790504|ref|NP_280328.1| thymidine kinase [Halobacterium sp. NRC-1]
gi|169236240|ref|YP_001689440.1| thymidine kinase [Halobacterium salinarum R1]
gi|73920101|sp|Q9HPQ9.1|KITH_HALSA RecName: Full=Thymidine kinase
gi|229486315|sp|B0R5S5.1|KITH_HALS3 RecName: Full=Thymidine kinase
gi|10581006|gb|AAG19808.1| thymidine kinase [Halobacterium sp. NRC-1]
gi|167727306|emb|CAP14092.1| thymidine kinase [Halobacterium salinarum R1]
Length = 195
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 51/197 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---S 209
EVI G MFSGKT EL+RR+RR + A V A DDRY + +H + A
Sbjct: 11 EVITGSMFSGKTEELLRRLRRAEIAGQDVAAVTPAVDDRYGEATLGSHAGRSWAATVVEP 70
Query: 210 AVELNKLIPHTKDID-VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E IP + + V+ IDE F
Sbjct: 71 TAEGVASIPTLLNGEQVVAIDEANF----------------------------------- 95
Query: 269 NAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
FP ++V + +A G+ VV++ D TF+ F + L+ +AE V+K+
Sbjct: 96 -----------FPAELVDVCQELAADGRRVVLSGTDQTFRGEPFEPVPQLMAIAEYVDKM 144
Query: 328 TAVCMSCFRDAAFTKRI 344
A+CM C A +R+
Sbjct: 145 RAICMQCGEPATRNQRL 161
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVELNKLIPHTKDI 73
RR+RR + A V A DDRY + +H + A E IP +
Sbjct: 25 LLRRLRRAEIAGQDVAAVTPAVDDRYGEATLGSHAGRSWAATVVEPTAEGVASIPTLLNG 84
Query: 74 D-VIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+ V+ IDE FFP ++V + +A G+ VV++ D TF+ F + L+ +AE V+K+
Sbjct: 85 EQVVAIDEANFFPAELVDVCQELAADGRRVVLSGTDQTFRGEPFEPVPQLMAIAEYVDKM 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+CM C A +R+
Sbjct: 145 RAICMQCGEPATRNQRL 161
>gi|395222707|ref|ZP_10403173.1| thymidine kinase [Pontibacter sp. BAB1700]
gi|394452896|gb|EJF08014.1| thymidine kinase [Pontibacter sp. BAB1700]
Length = 197
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 53/205 (25%)
Query: 147 RIGQEK--------EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS 198
R+G E EVI G MFSGKT ELIRR+ R + A + I + D RY E V
Sbjct: 6 RVGNENHAIRRGWIEVICGSMFSGKTEELIRRLNRAKIAKQKVEIFKPTIDKRYHEEDVV 65
Query: 199 THDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIK 258
+H+ + + ++ DV+GIDE QF + D VC +
Sbjct: 66 SHNANAIRSTPIDFAQDMLLLGGSCDVVGIDEAQFFD-----DGLAEVCVK--------- 111
Query: 259 RSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLI 318
+AN+G V+ A LD + F + +L+
Sbjct: 112 -------------------------------LANSGVRVIAAGLDMDYLGKPFGPMPALM 140
Query: 319 PLAECVEKLTAVCMSCFRDAAFTKR 343
+AE V K+ A+C+ C A ++ R
Sbjct: 141 AVAEYVTKVHAICVQCGDIATYSFR 165
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
RR+ R + A + I + D RY E V +H+ + + ++ DV+GI
Sbjct: 36 RRLNRAKIAKQKVEIFKPTIDKRYHEEDVVSHNANAIRSTPIDFAQDMLLLGGSCDVVGI 95
Query: 79 DEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF D + +AN+G V+ A LD + F + +L+ +AE V K+ A+C+
Sbjct: 96 DEAQFFDDGLAEVCVKLANSGVRVIAAGLDMDYLGKPFGPMPALMAVAEYVTKVHAICVQ 155
Query: 138 CFRDAAFTKRIG-QEKEVILG 157
C A ++ R E++V+LG
Sbjct: 156 CGDIATYSFRNALSEQQVLLG 176
>gi|375309111|ref|ZP_09774392.1| thymidine kinase [Paenibacillus sp. Aloe-11]
gi|375078420|gb|EHS56647.1| thymidine kinase [Paenibacillus sp. Aloe-11]
Length = 198
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 8/143 (5%)
Query: 25 QYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE------LNKLIPHTKDIDVIGI 78
QY + + + + A+D+RY T+++ + +L A+S + +++ TK+ DV+
Sbjct: 30 QYGHRKVIAYKPAEDNRYATDEIVSRIGYRLPAISIPRKLTDELVQRILEETKEADVVAF 89
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +++ + +A GK V+ L+ ++ F I L+ +A+ +EKLT+ C
Sbjct: 90 DEVQFFSRHIMALIQELAYCGKHVIADGLNLDYRGKEFGYIGGLLAMADDIEKLTSFCAV 149
Query: 138 C-FRDAAFTKRIGQEKEVILGPM 159
C +A FT+R+ K +GP+
Sbjct: 150 CGSSEAVFTQRMVNGKPSTVGPI 172
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 53/199 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRY-QYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I GPMFS K+ ELIRR ++ QY + + + + A+D+RY T+++ + +L A+S
Sbjct: 8 IITGPMFSEKSGELIRRCQKLIQYGHRKVIAYKPAEDNRYATDEIVSRIGYRLPAISIPR 67
Query: 213 ------LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ +++ TK+ DV+ DE QF S MA+ +E
Sbjct: 68 KLTDELVQRILEETKEADVVAFDEVQFF-----SRHIMALIQE----------------- 105
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+A GK V+ L+ ++ F I L+ +A+ +EK
Sbjct: 106 -----------------------LAYCGKHVIADGLNLDYRGKEFGYIGGLLAMADDIEK 142
Query: 327 LTAVCMSC-FRDAAFTKRI 344
LT+ C C +A FT+R+
Sbjct: 143 LTSFCAVCGSSEAVFTQRM 161
>gi|448414295|ref|ZP_21577434.1| thymidine kinase [Halosarcina pallida JCM 14848]
gi|445682588|gb|ELZ35005.1| thymidine kinase [Halosarcina pallida JCM 14848]
Length = 195
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA----V 208
EVI G MFSGKT EL+RR+RR + A + + A DDRY V +H + A
Sbjct: 11 EVITGSMFSGKTEELLRRLRRAEIAGQEVGVFKPAVDDRYGETTVGSHAGSQWEAHVVPA 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ +++ DV+ +DE F
Sbjct: 71 EGDGVWEILEKLNGEDVVAVDEANFFSA-------------------------------- 98
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
++V E +A G+ V+V+ D TF+ F + L+ AE V+KL
Sbjct: 99 -------------ELVDVCERLAADGRRVLVSGTDQTFRGEPFEPLPQLMATAEYVDKLQ 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICTVCGEPATRNQRL 161
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA----VSAVELNKLIPHTKD 72
RR+RR + A + + A DDRY V +H + A + +++
Sbjct: 25 LLRRLRRAEIAGQEVGVFKPAVDDRYGETTVGSHAGSQWEAHVVPAEGDGVWEILEKLNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ +DE FF ++V E +A G+ V+V+ D TF+ F + L+ AE V+KL
Sbjct: 85 EDVVAVDEANFFSAELVDVCERLAADGRRVLVSGTDQTFRGEPFEPLPQLMATAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 QAICTVCGEPATRNQRL 161
>gi|308069585|ref|YP_003871190.1| thymidine kinase [Paenibacillus polymyxa E681]
gi|305858864|gb|ADM70652.1| Thymidine kinase [Paenibacillus polymyxa E681]
Length = 198
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 25 QYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE------LNKLIPHTKDIDVIGI 78
QY + + + + A+D+RY +++ + +L A+S + +++ TKD DV+
Sbjct: 30 QYGHRKVVAYKPAEDNRYAEDEIVSRIGYRLPAISIPRKLTDELVQRILQETKDADVVAF 89
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++S + +A GK V+ L+ ++ F + L+ +A+ +EKLT+ C
Sbjct: 90 DEVQFFSRHIMSLVQELAYYGKHVIADGLNLDYRGKEFGYVGGLLAMADDIEKLTSFCAV 149
Query: 138 C-FRDAAFTKRIGQEKEVILGPM 159
C +A FT+R+ K +GP+
Sbjct: 150 CGSSEAVFTQRMVNGKPSTVGPI 172
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 53/199 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRY-QYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I GPMFS K+ ELIRR ++ QY + + + + A+D+RY +++ + +L A+S
Sbjct: 8 IITGPMFSEKSGELIRRCQKLIQYGHRKVVAYKPAEDNRYAEDEIVSRIGYRLPAISIPR 67
Query: 213 ------LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ +++ TKD DV+ DE QF
Sbjct: 68 KLTDELVQRILQETKDADVVAFDEVQFFS------------------------------- 96
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
++S + +A GK V+ L+ ++ F + L+ +A+ +EK
Sbjct: 97 --------------RHIMSLVQELAYYGKHVIADGLNLDYRGKEFGYVGGLLAMADDIEK 142
Query: 327 LTAVCMSC-FRDAAFTKRI 344
LT+ C C +A FT+R+
Sbjct: 143 LTSFCAVCGSSEAVFTQRM 161
>gi|310642644|ref|YP_003947402.1| thymidine kinase [Paenibacillus polymyxa SC2]
gi|386041702|ref|YP_005960656.1| thymidine kinase [Paenibacillus polymyxa M1]
gi|309247594|gb|ADO57161.1| Thymidine kinase [Paenibacillus polymyxa SC2]
gi|343097740|emb|CCC85949.1| thymidine kinase [Paenibacillus polymyxa M1]
Length = 220
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 25 QYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE------LNKLIPHTKDIDVIGI 78
QY + + + + A+D+RY +++ + +L A+S + +++ TKD DV+
Sbjct: 52 QYGHRKVVAYKPAEDNRYAEDEIVSRIGYRLPAISIPRKLTDELVQRILQETKDADVVAF 111
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF ++S + +A GK V+ L+ ++ F + L+ +A+ +EKLT+ C
Sbjct: 112 DEVQFFSRHIMSLIQELAYCGKHVIADGLNLDYRGKEFGYVGGLLAMADDIEKLTSFCAV 171
Query: 138 C-FRDAAFTKRIGQEKEVILGPM 159
C +A FT+R+ K +GP+
Sbjct: 172 CGSSEAVFTQRMVNGKPSTVGPI 194
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 53/199 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRY-QYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I GPMFS K+ ELIRR ++ QY + + + + A+D+RY +++ + +L A+S
Sbjct: 30 IITGPMFSEKSGELIRRCQKLIQYGHRKVVAYKPAEDNRYAEDEIVSRIGYRLPAISIPR 89
Query: 213 ------LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ +++ TKD DV+ DE QF
Sbjct: 90 KLTDELVQRILQETKDADVVAFDEVQFFS------------------------------- 118
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
++S + +A GK V+ L+ ++ F + L+ +A+ +EK
Sbjct: 119 --------------RHIMSLIQELAYCGKHVIADGLNLDYRGKEFGYVGGLLAMADDIEK 164
Query: 327 LTAVCMSC-FRDAAFTKRI 344
LT+ C C +A FT+R+
Sbjct: 165 LTSFCAVCGSSEAVFTQRM 183
>gi|108805615|ref|YP_645552.1| thymidine kinase [Rubrobacter xylanophilus DSM 9941]
gi|108766858|gb|ABG05740.1| Thymidine kinase [Rubrobacter xylanophilus DSM 9941]
Length = 202
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 52/195 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD---QQKLTAVSA 210
VI G MFSGKT ELIRR+RR YA + ++A D R + + +H+ + S+
Sbjct: 24 VITGSMFSGKTEELIRRVRRALYARRSVQVFKHALDTRAEGTAIRSHNGLLHEAAAVASS 83
Query: 211 VELNKLI-PHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
EL + P T D++ I+E QF + + + VCR
Sbjct: 84 EELQARVEPAT---DLVAIEEVQFFD-----GRIVEVCR--------------------- 114
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++A+ G V+ A LD F+ F + +L+ A+ V KL A
Sbjct: 115 -------------------NLADGGYDVIAAGLDMDFRGRPFGPVPALLAEADEVVKLRA 155
Query: 330 VCMSCFRDAAFTKRI 344
+C C R+A+ ++R+
Sbjct: 156 ICARCGREASRSQRL 170
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD---QQKLTAVSAVELNKLI-PHTKDID 74
RR+RR YA + ++A D R + + +H+ + S+ EL + P T D
Sbjct: 39 RRVRRALYARRSVQVFKHALDTRAEGTAIRSHNGLLHEAAAVASSEELQARVEPAT---D 95
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
++ I+E QFF +V ++A+ G V+ A LD F+ F + +L+ A+ V KL A
Sbjct: 96 LVAIEEVQFFDGRIVEVCRNLADGGYDVIAAGLDMDFRGRPFGPVPALLAEADEVVKLRA 155
Query: 134 VCMSCFRDAAFTKRI 148
+C C R+A+ ++R+
Sbjct: 156 ICARCGREASRSQRL 170
>gi|269114829|ref|YP_003302592.1| thymidine kinase [Mycoplasma hominis ATCC 23114]
gi|268322454|emb|CAX37189.1| Thymidine kinase [Mycoplasma hominis ATCC 23114]
Length = 195
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 47/193 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGK+ EL+RR+R +YA ++++ D+R+ +++ + + S
Sbjct: 11 EVITGPMFSGKSEELLRRVRTLEYAKMLPLLIKPEYDNRFSDDEIVSRCGVRRKTHSLKN 70
Query: 213 LNKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+N++ K I IDE F G S
Sbjct: 71 INEVYELLKQDKYKAIIIDEAHF---FGNS------------------------------ 97
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
++ A+ +AN G +V+VA LD + R F I +L+ +AE V KL A+
Sbjct: 98 ------------LIEVADDLANKGYLVIVAGLDQDYLRKPFGPIPALMAMAERVTKLQAI 145
Query: 331 CMSCFRDAAFTKR 343
C+ C A+ + R
Sbjct: 146 CVVCQHAASTSFR 158
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 5/144 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--ID 74
RR+R +YA ++++ D+R+ +++ + + S +N++ K
Sbjct: 25 LLRRVRTLEYAKMLPLLIKPEYDNRFSDDEIVSRCGVRRKTHSLKNINEVYELLKQDKYK 84
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
I IDE FF + ++ A+ +AN G +V+VA LD + R F I +L+ +AE V KL A
Sbjct: 85 AIIIDEAHFFGNSLIEVADDLANKGYLVIVAGLDQDYLRKPFGPIPALMAMAERVTKLQA 144
Query: 134 VCMSCFRDA--AFTKRIGQEKEVI 155
+C+ C A +F K E+ +I
Sbjct: 145 ICVVCQHAASTSFRKDSSNEQNLI 168
>gi|386773168|ref|ZP_10095546.1| thymidine kinase [Brachybacterium paraconglomeratum LC44]
Length = 193
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 83/199 (41%), Gaps = 54/199 (27%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I GPMF+GKT EL+RR+ R + A R +V ++ DDR +++STH + T +E
Sbjct: 1 MIAGPMFAGKTEELLRRVHRARLAGRRVEVVGHSLDDRGGADRLSTH-LGRSTPARMLED 59
Query: 214 NKLIPHTKD--------IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+++ D I+++ +DE QF
Sbjct: 60 PEMLRGLWDAPEGAEGRIELLALDEAQFF------------------------------- 88
Query: 266 ANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
P +V E + G V VA L T+ F+ + L+ AE V
Sbjct: 89 --------------GPALVPVLEQLLEDGIDVAVAGLCLTYDGEPFSPLPELMARAEEVV 134
Query: 326 KLTAVCMSCFRDAAFTKRI 344
KLTAVC C DAAF R+
Sbjct: 135 KLTAVCTVCGADAAFHIRL 153
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD---- 72
RR+ R + A R +V ++ DDR ++++TH + T +E +++ D
Sbjct: 14 LLRRVHRARLAGRRVEVVGHSLDDRGGADRLSTH-LGRSTPARMLEDPEMLRGLWDAPEG 72
Query: 73 ----IDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 127
I+++ +DE QFF P +V E + G V VA L T+ F+ + L+ AE
Sbjct: 73 AEGRIELLALDEAQFFGPALVPVLEQLLEDGIDVAVAGLCLTYDGEPFSPLPELMARAEE 132
Query: 128 VEKLTAVCMSCFRDAAFTKRI 148
V KLTAVC C DAAF R+
Sbjct: 133 VVKLTAVCTVCGADAAFHIRL 153
>gi|282882580|ref|ZP_06291199.1| thymidine kinase [Peptoniphilus lacrimalis 315-B]
gi|281297555|gb|EFA90032.1| thymidine kinase [Peptoniphilus lacrimalis 315-B]
Length = 200
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 44/189 (23%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R+ ANY+ M + D R+ K+ +HD+ +A++ + + +
Sbjct: 13 GSMFSGKTSSLEKDLNRFSIANYKTMAFKPKVDSRFSESKIVSHDKNSFSAITVEDSSDI 72
Query: 217 IP--HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ K VIGIDE QF +K P K L N
Sbjct: 73 LKVVLEKSPQVIGIDEIQF-----------------------LKDKPEKILKN------- 102
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
E + + VVVA LD + F + L+P A+ + K AVC C
Sbjct: 103 ------------IEEILDMSVTVVVAGLDMDYLAHSFEIVKELMPKADYLYKHHAVCKRC 150
Query: 335 FRDAAFTKR 343
DA + R
Sbjct: 151 GTDAWVSHR 159
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIP--HTKDIDVI 76
+ + R+ ANY+ M + D R+ K+ +HD+ +A++ + + ++ K VI
Sbjct: 25 KDLNRFSIANYKTMAFKPKVDSRFSESKIVSHDKNSFSAITVEDSSDILKVVLEKSPQVI 84
Query: 77 GIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
GIDE QF D ++ E + + VVVA LD + F + L+P A+ + K
Sbjct: 85 GIDEIQFLKDKPEKILKNIEEILDMSVTVVVAGLDMDYLAHSFEIVKELMPKADYLYKHH 144
Query: 133 AVCMSCFRDAAFTKR-IGQEKEVILG 157
AVC C DA + R + ++LG
Sbjct: 145 AVCKRCGTDAWVSHRKVNVNDRLLLG 170
>gi|300814868|ref|ZP_07095099.1| thymidine kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300510958|gb|EFK38227.1| thymidine kinase [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 200
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 44/189 (23%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + + R+ ANY+ M + D R+ K+ +HD+ +A++ + + +
Sbjct: 13 GSMFSGKTSSLEKDLNRFSIANYKTMAFKPKVDSRFSESKIVSHDKNSFSAITVEDSSDI 72
Query: 217 IP--HTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ K VIGIDE QF +K P K L N
Sbjct: 73 LKVVLEKSPQVIGIDEIQF-----------------------LKDKPEKILKN------- 102
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
E + + VVVA LD + F + L+P A+ + K AVC C
Sbjct: 103 ------------IEEILDMSVTVVVAGLDMDYLAHSFEIVKELMPKADYLYKHHAVCKRC 150
Query: 335 FRDAAFTKR 343
DA + R
Sbjct: 151 GTDAWVSHR 159
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIP--HTKDIDVI 76
+ + R+ ANY+ M + D R+ K+ +HD+ +A++ + + ++ K VI
Sbjct: 25 KDLNRFSIANYKTMAFKPKVDSRFSESKIVSHDKNSFSAITVEDSSDILKVVLEKSPQVI 84
Query: 77 GIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
GIDE QF D ++ E + + VVVA LD + F + L+P A+ + K
Sbjct: 85 GIDEIQFLKDKPEKILKNIEEILDMSVTVVVAGLDMDYLAHSFEIVKELMPKADYLYKHH 144
Query: 133 AVCMSCFRDAAFTKR-IGQEKEVILG 157
AVC C DA + R + ++LG
Sbjct: 145 AVCKRCGTDAWVSHRKVNVNDRLLLG 170
>gi|399888432|ref|ZP_10774309.1| thymidine kinase [Clostridium arbusti SL206]
Length = 194
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 39 DDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIGIDEGQFF-PDVVSFAESMAN 96
D+RY E V +H +K A+ + +++ +D DV+ +DE QFF ++V ++A+
Sbjct: 47 DNRYSIEDVVSHCGEKEEAIPVKDSKEIVRLLEDDSDVVAVDEVQFFDKNIVDILTAIAD 106
Query: 97 AGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
GK V+ A LD F+ F + SL+ +AE V+K+ A+CM C A T+R+
Sbjct: 107 NGKRVICAGLDMDFRGNPFGCVPSLMAIAEFVDKIQAICMCCGNPATRTQRL 158
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI+GPM+SGK+ ELIRRIRR + A + + + D+RY E V +H +K A+ +
Sbjct: 11 EVIVGPMYSGKSEELIRRIRRAKIARQKVQVFKPEIDNRYSIEDVVSHCGEKEEAIPVKD 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + D DV+ +DE QF +
Sbjct: 71 SKEIVRLLEDDSDVVAVDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
++V ++A+ GK V+ A LD F+ F + SL+ +AE V+K+ A+C
Sbjct: 95 ---------KNIVDILTAIADNGKRVICAGLDMDFRGNPFGCVPSLMAIAEFVDKIQAIC 145
Query: 332 MSCFRDAAFTKRI 344
M C A T+R+
Sbjct: 146 MCCGNPATRTQRL 158
>gi|320160820|ref|YP_004174044.1| thymidine kinase [Anaerolinea thermophila UNI-1]
gi|319994673|dbj|BAJ63444.1| thymidine kinase [Anaerolinea thermophila UNI-1]
Length = 190
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 39 DDRYDTEKVATHDQQKLTA--VSAVE--LNKLIPHTKDIDVIGIDEGQFFPD-VVSFAES 93
DDRY EKV +H + A +S E KL P + V+ IDE QFF + +V ++
Sbjct: 45 DDRYSVEKVTSHAGNEFEAYPISRSEEIWQKLDP---EASVVAIDEAQFFDEGIVGVVQA 101
Query: 94 MANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
+A+ G V+VA LD F+ F + L+ +AE V+KL A+CM C A+ T+R+
Sbjct: 102 LASKGVRVIVAGLDMDFRGEPFGVMPVLMAIAERVDKLQAICMVCGEPASRTQRL 156
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 52/196 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA--VSA 210
EVI G MFSGKT ELIRR+RR + A + + + DDRY EKV++H + A +S
Sbjct: 9 EVITGSMFSGKTDELIRRLRRARIARQKVQVFKPIIDDRYSVEKVTSHAGNEFEAYPISR 68
Query: 211 VE--LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
E KL P + V+ IDE QF +
Sbjct: 69 SEEIWQKLDP---EASVVAIDEAQFFD--------------------------------- 92
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
+V +++A+ G V+VA LD F+ F + L+ +AE V+KL
Sbjct: 93 ------------EGIVGVVQALASKGVRVIVAGLDMDFRGEPFGVMPVLMAIAERVDKLQ 140
Query: 329 AVCMSCFRDAAFTKRI 344
A+CM C A+ T+R+
Sbjct: 141 AICMVCGEPASRTQRL 156
>gi|197294747|ref|YP_001799288.1| thymidine kinase [Candidatus Phytoplasma australiense]
gi|171854074|emb|CAM12047.1| Thymidine kinase [Candidatus Phytoplasma australiense]
Length = 199
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEK-VSTHDQQKLTAVSAV 211
EVI GPMF+GKT LI+R + Q + + D+RY +E + +H Q K A+
Sbjct: 10 EVICGPMFAGKTEALIKRYQEAQKLKKNILSFKPRIDNRYSSEGFIVSHSQNKFPAILID 69
Query: 212 ELNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ ++P T + D+I IDE QF++
Sbjct: 70 QSRDILPFVTPETDLIIIDEVQFLD----------------------------------- 94
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
D+ + +AN +++A LD F+ F + L+ LAE V KLTA+
Sbjct: 95 ----------NDIFGIVDYLANQNIQIILAGLDLDFKGKPFGPMPYLLALAEVVTKLTAI 144
Query: 331 CMSCFRDAAFTKRI 344
C + A T+R+
Sbjct: 145 CAVSGKKATKTQRL 158
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 21 IRRYQYAN-YRCMIVRYAK--DDRYDTEK-VATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
I+RYQ A + I+ + D+RY +E + +H Q K A+ + ++P T + D+
Sbjct: 25 IKRYQEAQKLKKNILSFKPRIDNRYSSEGFIVSHSQNKFPAILIDQSRDILPFVTPETDL 84
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
I IDE QF D+ + +AN +++A LD F+ F + L+ LAE V KLTA+
Sbjct: 85 IIIDEVQFLDNDIFGIVDYLANQNIQIILAGLDLDFKGKPFGPMPYLLALAEVVTKLTAI 144
Query: 135 CMSCFRDAAFTKRI 148
C + A T+R+
Sbjct: 145 CAVSGKKATKTQRL 158
>gi|399924910|ref|ZP_10782268.1| thymidine kinase [Peptoniphilus rhinitidis 1-13]
Length = 200
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD--IDVI 76
+ ++R+ ANY+ + + D RY ++ THD+ L A+ + +++ K +VI
Sbjct: 25 KDLKRFSIANYKVVAFKPIVDKRYAKSEIVTHDKISLDAIEVESIGEILDFAKKNLPEVI 84
Query: 77 GIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
GIDE QF D V+ E + + G VV+A LD + F + ++P + + K
Sbjct: 85 GIDEIQFLNDEPEVVIKNLEKILSMGITVVMAGLDMDYMARPFEIVKEIMPKVDYLNKHH 144
Query: 133 AVCMSCFRDAAFTKR-IGQEKEVILG 157
AVC C DA + R I K V LG
Sbjct: 145 AVCKRCGTDAWVSHRKIKSNKRVELG 170
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 44/189 (23%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKL 216
G MFSGKT+ L + ++R+ ANY+ + + D RY ++ THD+ L A+ + ++
Sbjct: 13 GSMFSGKTSSLEKDLKRFSIANYKVVAFKPIVDKRYAKSEIVTHDKISLDAIEVESIGEI 72
Query: 217 IPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
+ K +VIGIDE QF LN
Sbjct: 73 LDFAKKNLPEVIGIDEIQF--------------------------------------LND 94
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
P V+ E + + G VV+A LD + F + ++P + + K AVC C
Sbjct: 95 EPEV----VIKNLEKILSMGITVVMAGLDMDYMARPFEIVKEIMPKVDYLNKHHAVCKRC 150
Query: 335 FRDAAFTKR 343
DA + R
Sbjct: 151 GTDAWVSHR 159
>gi|335041018|ref|ZP_08534136.1| Thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
gi|334179168|gb|EGL81815.1| Thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
Length = 209
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 78/193 (40%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGK+ ELIRR+R +YA + + D+RY V +H+ + A +
Sbjct: 11 EVICGSMFSGKSEELIRRVRLARYAKQPTQVFKPVIDNRYSEVAVVSHNGVSIPATCVEQ 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ + ++ + IDE QF +
Sbjct: 71 ASHIAEQVRNETACVAIDEVQFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
VV A+ +A+ GK V+ A LD F+ F L+ AE V KL AVC
Sbjct: 95 ---------ETVVEVAQYLADQGKRVICAGLDQDFRGQPFGPTPLLLACAEYVTKLQAVC 145
Query: 332 MSCFRDAAFTKRI 344
C A+ T+R+
Sbjct: 146 ACCGAPASRTQRL 158
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR+R +YA + + D+RY V +H+ + A + + + ++ +
Sbjct: 27 RRVRLARYAKQPTQVFKPVIDNRYSEVAVVSHNGVSIPATCVEQASHIAEQVRNETACVA 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + VV A+ +A+ GK V+ A LD F+ F L+ AE V KL AVC
Sbjct: 87 IDEVQFFDETVVEVAQYLADQGKRVICAGLDQDFRGQPFGPTPLLLACAEYVTKLQAVCA 146
Query: 137 SCFRDAAFTKRI 148
C A+ T+R+
Sbjct: 147 CCGAPASRTQRL 158
>gi|377822351|ref|YP_005175277.1| thymidine kinase [Mycoplasma pneumoniae 309]
gi|358640319|dbj|BAL21613.1| thymidine kinase [Mycoplasma pneumoniae 309]
gi|440453225|gb|AGC03984.1| Thymidine kinase [Mycoplasma pneumoniae M129-B7]
Length = 216
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR--YDTEKVSTHDQQKLTAVSA 210
EVI GPMFSGKT EL+R+I+R++ A +I + D R + + + H + + S
Sbjct: 16 EVICGPMFSGKTEELLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDEAIEINSP 75
Query: 211 VELNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+E+ + TKD DV+ IDE QF
Sbjct: 76 LEIYDYL--TKDRFDVVAIDEAQFFS---------------------------------- 99
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++V +S+ + G V+V+ LD F+ F I L+ +A+ + KL A
Sbjct: 100 -----------SEIVEVVKSLNDLGINVIVSGLDTDFRAEPFGSIPQLLAIADKICKLDA 148
Query: 330 VCMSCFRDAAFTKRI 344
VC C + A T+RI
Sbjct: 149 VCNVCGQLAQRTQRI 163
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDR--YDTEKVATHDQQKLTAVSAVELNKLIPHTKD-I 73
R+I+R++ A +I + D R + + H + + S +E+ + TKD
Sbjct: 30 LLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDEAIEINSPLEIYDYL--TKDRF 87
Query: 74 DVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ IDE QFF ++V +S+ + G V+V+ LD F+ F I L+ +A+ + KL
Sbjct: 88 DVVAIDEAQFFSSEIVEVVKSLNDLGINVIVSGLDTDFRAEPFGSIPQLLAIADKICKLD 147
Query: 133 AVCMSCFRDAAFTKRI-GQEKEVIL 156
AVC C + A T+RI + E +L
Sbjct: 148 AVCNVCGQLAQRTQRIVSKSNETVL 172
>gi|57641253|ref|YP_183731.1| thymidine kinase [Thermococcus kodakarensis KOD1]
gi|73920109|sp|Q5JGT7.1|KITH_PYRKO RecName: Full=Thymidine kinase
gi|57159577|dbj|BAD85507.1| Thymidine kinase [Thermococcus kodakarensis KOD1]
Length = 197
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 53/199 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMF+GKTTELI+R+ R +A + + + A D+RY +V H+ + A
Sbjct: 11 EVITGPMFAGKTTELIKRVERQIFAKRKAALFKPAIDNRYSEREVVAHNGLRYEAFVVPT 70
Query: 213 LNKLIPHTKDI------DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
K + K+I +VIGIDE QF
Sbjct: 71 TEKGVERIKEITLNEGYEVIGIDEVQF--------------------------------- 97
Query: 267 NENAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FP VV +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 98 -------------FPMSVVEALNELADQGIYVIASGLNLDFKGDPFPVTKELLVRADNIV 144
Query: 326 KLTAVCMSCFRDAAFTKRI 344
LTAVC C + A ++R+
Sbjct: 145 YLTAVCTVCGKPATRSQRL 163
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI--- 73
+R+ R +A + + + A D+RY +V H+ + A K + K+I
Sbjct: 25 LIKRVERQIFAKRKAALFKPAIDNRYSEREVVAHNGLRYEAFVVPTTEKGVERIKEITLN 84
Query: 74 ---DVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
+VIGIDE QFFP VV +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 85 EGYEVIGIDEVQFFPMSVVEALNELADQGIYVIASGLNLDFKGDPFPVTKELLVRADNIV 144
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTAVC C + A ++R+
Sbjct: 145 YLTAVCTVCGKPATRSQRL 163
>gi|385326656|ref|YP_005881088.1| thymidine kinase [Mycoplasma pneumoniae FH]
gi|301633252|gb|ADK86806.1| thymidine kinase [Mycoplasma pneumoniae FH]
Length = 224
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR--YDTEKVSTHDQQKLTAVSA 210
EVI GPMFSGKT EL+R+I+R++ A +I + D R + + + H + + S
Sbjct: 24 EVICGPMFSGKTEELLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDEAIEINSP 83
Query: 211 VELNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+E+ + TKD DV+ IDE QF
Sbjct: 84 LEIYDYL--TKDRFDVVAIDEAQFFS---------------------------------- 107
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++V +S+ + G V+V+ LD F+ F I L+ +A+ + KL A
Sbjct: 108 -----------SEIVEVVKSLNDLGINVIVSGLDTDFRAEPFGSIPQLLAIADKICKLDA 156
Query: 330 VCMSCFRDAAFTKRI 344
VC C + A T+RI
Sbjct: 157 VCNVCGQLAQRTQRI 171
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDR--YDTEKVATHDQQKLTAVSAVELNKLIPHTKD-I 73
R+I+R++ A +I + D R + + H + + S +E+ + TKD
Sbjct: 38 LLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDEAIEINSPLEIYDYL--TKDRF 95
Query: 74 DVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ IDE QFF ++V +S+ + G V+V+ LD F+ F I L+ +A+ + KL
Sbjct: 96 DVVAIDEAQFFSSEIVEVVKSLNDLGINVIVSGLDTDFRAEPFGSIPQLLAIADKICKLD 155
Query: 133 AVCMSCFRDAAFTKRI-GQEKEVIL 156
AVC C + A T+RI + E +L
Sbjct: 156 AVCNVCGQLAQRTQRIVSKSNETVL 180
>gi|345004797|ref|YP_004807650.1| thymidine kinase [halophilic archaeon DL31]
gi|344320423|gb|AEN05277.1| Thymidine kinase [halophilic archaeon DL31]
Length = 195
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 79/196 (40%), Gaps = 49/196 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---- 208
EV+ G MFSGKT EL+RR+RR + A + A DDRY + +H+ ++ A
Sbjct: 11 EVVTGSMFSGKTEELLRRLRRAEIAGQDVIAFTPAIDDRYGDTTIGSHEGRQWDAQVVDN 70
Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
+ + H +V+ IDE F +
Sbjct: 71 EGAGVWDIEDHLNGQEVVAIDEANFFD--------------------------------- 97
Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
D+V E +A G+ VVV+ D TF+ F + +++ AE V+KL
Sbjct: 98 ------------NDLVDVCEKLAADGRRVVVSGTDITFRGEPFTPLPAVMATAEYVDKLR 145
Query: 329 AVCMSCFRDAAFTKRI 344
A+C C A +R+
Sbjct: 146 AICSVCGEPATRNQRL 161
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+RR + A + A DDRY + +H+ ++ A + + H
Sbjct: 25 LLRRLRRAEIAGQDVIAFTPAIDDRYGDTTIGSHEGRQWDAQVVDNEGAGVWDIEDHLNG 84
Query: 73 IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+ IDE FF D+V E +A G+ VVV+ D TF+ F + +++ AE V+KL
Sbjct: 85 QEVVAIDEANFFDNDLVDVCEKLAADGRRVVVSGTDITFRGEPFTPLPAVMATAEYVDKL 144
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A +R+
Sbjct: 145 RAICSVCGEPATRNQRL 161
>gi|342210751|ref|ZP_08703504.1| thymidine kinase [Mycoplasma anatis 1340]
gi|341578928|gb|EGS29266.1| thymidine kinase [Mycoplasma anatis 1340]
Length = 191
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMF+GKT EL++RI AN +I++ D R+ + + + + + + A++ +
Sbjct: 11 EVITGPMFAGKTEELLKRINILSIANINTLIIKPRFDTRFSFDNIVSRNGKFVKAINVSK 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
++++ H K I + IDE F +
Sbjct: 71 PSEILEHYDKSIKSVAIDEVHFFD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
E DV++ + + G V+V+ LD + F + L+ +A+ V KL +VC
Sbjct: 95 ------EEIIDVIN---KLTSKGVRVIVSGLDMDYMMRPFGVVPKLLAIADEVSKLKSVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
+ C AAF+ R E+R+
Sbjct: 146 VVCHSAAAFSFRKDNSTEIRL 166
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
+RI AN +I++ D R+ + + + + + + A++ + ++++ H K I
Sbjct: 25 LLKRINILSIANINTLIIKPRFDTRFSFDNIVSRNGKFVKAINVSKPSEILEHYDKSIKS 84
Query: 76 IGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
+ IDE FF +++ + + G V+V+ LD + F + L+ +A+ V KL +V
Sbjct: 85 VAIDEVHFFDEEIIDVINKLTSKGVRVIVSGLDMDYMMRPFGVVPKLLAIADEVSKLKSV 144
Query: 135 CMSCFRDAAFTKRIGQEKEV-ILG 157
C+ C AAF+ R E+ +LG
Sbjct: 145 CVVCHSAAAFSFRKDNSTEIRLLG 168
>gi|13507783|ref|NP_109732.1| thymidine kinase [Mycoplasma pneumoniae M129]
gi|2497575|sp|P75070.1|KITH_MYCPN RecName: Full=Thymidine kinase
gi|1673767|gb|AAB95758.1| thymidine kinase [Mycoplasma pneumoniae M129]
Length = 191
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 50/195 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR--YDTEKVSTHDQQKLTAVSA 210
EVI GPMFSGKT EL+R+I+R++ A +I + D R + + + H + + S
Sbjct: 16 EVICGPMFSGKTEELLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDEAIEINSP 75
Query: 211 VELNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+E+ + TKD DV+ IDE QF
Sbjct: 76 LEIYDYL--TKDRFDVVAIDEAQFFS---------------------------------- 99
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++V +S+ + G V+V+ LD F+ F I L+ +A+ + KL A
Sbjct: 100 -----------SEIVEVVKSLNDLGINVIVSGLDTDFRAEPFGSIPQLLAIADKICKLDA 148
Query: 330 VCMSCFRDAAFTKRI 344
VC C + A T+RI
Sbjct: 149 VCNVCGQLAQRTQRI 163
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDR--YDTEKVATHDQQKLTAVSAVELNKLIPHTKD-I 73
R+I+R++ A +I + D R + + H + + S +E+ + TKD
Sbjct: 30 LLRKIKRWKLAKIPVIIFKPKIDTRQQHLVKSRNGHSDEAIEINSPLEIYDYL--TKDRF 87
Query: 74 DVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ IDE QFF ++V +S+ + G V+V+ LD F+ F I L+ +A+ + KL
Sbjct: 88 DVVAIDEAQFFSSEIVEVVKSLNDLGINVIVSGLDTDFRAEPFGSIPQLLAIADKICKLD 147
Query: 133 AVCMSCFRDAAFTKRI-GQEKEVIL 156
AVC C + A T+RI + E +L
Sbjct: 148 AVCNVCGQLAQRTQRIVSKSNETVL 172
>gi|448485681|ref|ZP_21606826.1| thymidine kinase [Halorubrum arcis JCM 13916]
gi|445817380|gb|EMA67254.1| thymidine kinase [Halorubrum arcis JCM 13916]
Length = 213
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 80/195 (41%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSA 210
EVI G MFSGKT EL+RR+RR + A + A DDRY + +H Q + T V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDN 70
Query: 211 VELNKL-IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L I +V+ IDE F S+ + VC
Sbjct: 71 EGDGPLDILDDDPAEVVAIDEANFF-----SEALIEVCN--------------------- 104
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++A+ G V+V+ D TF+ F+ + L+ AE V+KL A
Sbjct: 105 -------------------ALADRGSRVIVSGTDQTFRGEPFDPLPQLMATAEYVDKLQA 145
Query: 330 VCMSCFRDAAFTKRI 344
+C C A+ +R+
Sbjct: 146 ICSVCGEPASRNQRL 160
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD--QQKLTAVSAVELNKL-IPHTKD 72
RR+RR + A + A DDRY + +H Q + T V L I
Sbjct: 24 ELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDNEGDGPLDILDDDP 83
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+ IDE FF + ++ ++A+ G V+V+ D TF+ F+ + L+ AE V+KL
Sbjct: 84 AEVVAIDEANFFSEALIEVCNALADRGSRVIVSGTDQTFRGEPFDPLPQLMATAEYVDKL 143
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 144 QAICSVCGEPASRNQRL 160
>gi|448427942|ref|ZP_21584171.1| thymidine kinase [Halorubrum terrestre JCM 10247]
gi|448453651|ref|ZP_21593994.1| thymidine kinase [Halorubrum litoreum JCM 13561]
gi|448509902|ref|ZP_21615783.1| thymidine kinase [Halorubrum distributum JCM 9100]
gi|448519401|ref|ZP_21618033.1| thymidine kinase [Halorubrum distributum JCM 10118]
gi|445677019|gb|ELZ29526.1| thymidine kinase [Halorubrum terrestre JCM 10247]
gi|445696243|gb|ELZ48334.1| thymidine kinase [Halorubrum distributum JCM 9100]
gi|445703761|gb|ELZ55683.1| thymidine kinase [Halorubrum distributum JCM 10118]
gi|445807451|gb|EMA57536.1| thymidine kinase [Halorubrum litoreum JCM 13561]
Length = 213
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 80/195 (41%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSA 210
EVI G MFSGKT EL+RR+RR + A + A DDRY + +H Q + T V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDN 70
Query: 211 VELNKL-IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L I +V+ IDE F S+ + VC
Sbjct: 71 EGDGPLDILDDDPAEVVAIDEANFF-----SEALIEVCN--------------------- 104
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++A+ G V+V+ D TF+ F+ + L+ AE V+KL A
Sbjct: 105 -------------------ALADRGSRVIVSGTDQTFRGEPFDPLPQLMATAEYVDKLQA 145
Query: 330 VCMSCFRDAAFTKRI 344
+C C A+ +R+
Sbjct: 146 ICSVCGEPASRNQRL 160
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD--QQKLTAVSAVELNKL-IPHTKD 72
RR+RR + A + A DDRY + +H Q + T V L I
Sbjct: 24 ELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDNEGDGPLDILDDDP 83
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+ IDE FF + ++ ++A+ G V+V+ D TF+ F+ + L+ AE V+KL
Sbjct: 84 AEVVAIDEANFFSEALIEVCNALADRGSRVIVSGTDQTFRGEPFDPLPQLMATAEYVDKL 143
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 144 QAICSVCGEPASRNQRL 160
>gi|16082222|ref|NP_394670.1| thymidine kinase [Thermoplasma acidophilum DSM 1728]
gi|10640525|emb|CAC12339.1| thymidine kinase related protein [Thermoplasma acidophilum]
Length = 186
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 47/190 (24%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNK--- 215
MFSGKT+ LI + R+ A + + + D RY +V TH KL AV A +
Sbjct: 1 MFSGKTSRLIELMERHILAGRKVTLFKPEIDSRYSENEVVTHKGIKLPAVIAPTDERFGE 60
Query: 216 -LIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNV 274
L T+D +V+G DE QF + P R P
Sbjct: 61 FLAARTRDSNVLGFDEAQFWK--------------------PSSRLP------------- 87
Query: 275 PPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
E +AN+G+ V VAAL+ F + ++ +++ + L+AVC C
Sbjct: 88 ----------QHLEDLANSGRTVYVAALNRDHFGNPFRMTVDILAISDEIYTLSAVCSRC 137
Query: 335 FRDAAFTKRI 344
DA FT+RI
Sbjct: 138 GSDAIFTQRI 147
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 21 IRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNK----LIPHTKDIDVI 76
+ R+ A + + + D RY +V TH KL AV A + L T+D +V+
Sbjct: 13 MERHILAGRKVTLFKPEIDSRYSENEVVTHKGIKLPAVIAPTDERFGEFLAARTRDSNVL 72
Query: 77 GIDEGQFF---PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
G DE QF+ + E +AN+G+ V VAAL+ F + ++ +++ + L+A
Sbjct: 73 GFDEAQFWKPSSRLPQHLEDLANSGRTVYVAALNRDHFGNPFRMTVDILAISDEIYTLSA 132
Query: 134 VCMSCFRDAAFTKRI 148
VC C DA FT+RI
Sbjct: 133 VCSRCGSDAIFTQRI 147
>gi|341582978|ref|YP_004763470.1| thymidine kinase [Thermococcus sp. 4557]
gi|340810636|gb|AEK73793.1| thymidine kinase [Thermococcus sp. 4557]
Length = 193
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 83/199 (41%), Gaps = 53/199 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---- 208
EVI GPMF+GKTTELI+RI R +A + + + + D+RY + V H+ + A
Sbjct: 9 EVITGPMFAGKTTELIKRIERQTFAKRKAALFKPSIDNRYSEDDVVAHNGLRYEAFVVPT 68
Query: 209 --SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
VEL + I + +VIG+DE QF
Sbjct: 69 NEEGVELIERITLDEGFEVIGVDEVQF--------------------------------- 95
Query: 267 NENAALNVPPPPEFPDV-VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FP V V +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 96 -------------FPQVIVETLNRLADEGIYVIASGLNLDFKGDPFPVTRDLLVRADNIV 142
Query: 326 KLTAVCMSCFRDAAFTKRI 344
LTAVC C + A ++R+
Sbjct: 143 YLTAVCTVCGKPATRSQRL 161
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV------SAVELNKLIPHT 70
+RI R +A + + + + D+RY + V H+ + A VEL + I
Sbjct: 23 LIKRIERQTFAKRKAALFKPSIDNRYSEDDVVAHNGLRYEAFVVPTNEEGVELIERITLD 82
Query: 71 KDIDVIGIDEGQFFPDV-VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
+ +VIG+DE QFFP V V +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 83 EGFEVIGVDEVQFFPQVIVETLNRLADEGIYVIASGLNLDFKGDPFPVTRDLLVRADNIV 142
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTAVC C + A ++R+
Sbjct: 143 YLTAVCTVCGKPATRSQRL 161
>gi|384938063|ref|ZP_10029756.1| thymidine kinase [Mycoplasma canis UF31]
gi|384393612|gb|EIE40061.1| thymidine kinase [Mycoplasma canis UF31]
Length = 193
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 46/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPMFSGKT EL++RI+ + A M+ + + D R+D +K+ + K A+
Sbjct: 11 EIITGPMFSGKTEELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGAKTKAIVIKN 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++ + IDE F++
Sbjct: 71 SKEILDHWNEEYKAVAIDEVNFLD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+ + + +G V+ + LD F R F L+ +A+ V+KL AVC
Sbjct: 95 ---------EGIFEVIDKLVLSGVRVIASGLDMDFLRRPFGVTPGLLAIADEVKKLKAVC 145
Query: 332 MSCFRDAAFTKR 343
+ C DAAF+ R
Sbjct: 146 LVCKSDAAFSFR 157
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDID 74
+RI+ + A M+ + + D R+D +K+ + K A+ +++ H ++
Sbjct: 24 ELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGAKTKAIVIKNSKEILDHWNEEYK 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+ IDE F + + + + +G V+ + LD F R F L+ +A+ V+KL A
Sbjct: 84 AVAIDEVNFLDEGIFEVIDKLVLSGVRVIASGLDMDFLRRPFGVTPGLLAIADEVKKLKA 143
Query: 134 VCMSCFRDAAFTKR 147
VC+ C DAAF+ R
Sbjct: 144 VCLVCKSDAAFSFR 157
>gi|419705381|ref|ZP_14232920.1| thymidine kinase [Mycoplasma canis UFG1]
gi|419706028|ref|ZP_14233560.1| thymidine kinase [Mycoplasma canis UFG4]
gi|384395201|gb|EIE41633.1| thymidine kinase [Mycoplasma canis UFG1]
gi|384395411|gb|EIE41842.1| thymidine kinase [Mycoplasma canis UFG4]
Length = 193
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 46/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPMFSGKT EL++RI+ + A M+ + + D R+D +K+ + K A+
Sbjct: 11 EIITGPMFSGKTEELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGAKTKAIVIKN 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++ + IDE F++
Sbjct: 71 SKEILDHWNEEYKAVAIDEVNFLD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+ + + +G V+ + LD F R F L+ +A+ V+KL AVC
Sbjct: 95 ---------EGIFEVIDKLVLSGVRVIASGLDMDFLRRPFGVTPGLLAIADEVKKLKAVC 145
Query: 332 MSCFRDAAFTKR 343
+ C DAAF+ R
Sbjct: 146 LVCKSDAAFSFR 157
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDID 74
+RI+ + A M+ + + D R+D +K+ + K A+ +++ H ++
Sbjct: 24 ELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGAKTKAIVIKNSKEILDHWNEEYK 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+ IDE F + + + + +G V+ + LD F R F L+ +A+ V+KL A
Sbjct: 84 AVAIDEVNFLDEGIFEVIDKLVLSGVRVIASGLDMDFLRRPFGVTPGLLAIADEVKKLKA 143
Query: 134 VCMSCFRDAAFTKR 147
VC+ C DAAF+ R
Sbjct: 144 VCLVCKSDAAFSFR 157
>gi|419704734|ref|ZP_14232279.1| thymidine kinase [Mycoplasma canis UF33]
gi|384393828|gb|EIE40276.1| thymidine kinase [Mycoplasma canis UF33]
Length = 193
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 46/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPMFSGKT EL++RI+ + A M+ + + D R+D +K+ + K A+
Sbjct: 11 EIITGPMFSGKTEELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGAKTKAIVIKN 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++ + IDE F++
Sbjct: 71 SKEILDHWNEEYKAVAIDEVNFLD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+ + + +G V+ + LD F R F L+ +A+ V+KL AVC
Sbjct: 95 ---------EGIFEVIDKLVLSGVRVIASGLDMDFLRRPFGVTPGLLAIADEVKKLKAVC 145
Query: 332 MSCFRDAAFTKR 343
+ C DAAF+ R
Sbjct: 146 LVCKSDAAFSFR 157
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDID 74
+RI+ + A M+ + + D R+D +K+ + K A+ +++ H ++
Sbjct: 24 ELLKRIKILEIAEINTMVFKPSFDTRFDAKKIVSRTGAKTKAIVIKNSKEILDHWNEEYK 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+ IDE F + + + + +G V+ + LD F R F L+ +A+ V+KL A
Sbjct: 84 AVAIDEVNFLDEGIFEVIDKLVLSGVRVIASGLDMDFLRRPFGVTPGLLAIADEVKKLKA 143
Query: 134 VCMSCFRDAAFTKR 147
VC+ C DAAF+ R
Sbjct: 144 VCLVCKSDAAFSFR 157
>gi|212224382|ref|YP_002307618.1| thymidine kinase [Thermococcus onnurineus NA1]
gi|212009339|gb|ACJ16721.1| Thymidine kinase [Thermococcus onnurineus NA1]
Length = 192
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 53/199 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV---- 208
EVI GPMF+GKTTELI+RI R +A + + + A D+RY +++ H+ + A
Sbjct: 8 EVITGPMFAGKTTELIKRIERQMFAKRKAALFKPAIDNRYSEDEIVAHNGLRYEAFVIPT 67
Query: 209 --SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
V I ++ +VIGIDE QF
Sbjct: 68 DEEGVRTIGEITKRENFEVIGIDEVQF--------------------------------- 94
Query: 267 NENAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FP +V + +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 95 -------------FPMSIVETLDRLADDGVYVIASGLNLDFKGDPFPVTRELLVRADNIV 141
Query: 326 KLTAVCMSCFRDAAFTKRI 344
LTAVC C R A ++R+
Sbjct: 142 YLTAVCTVCGRPATRSQRL 160
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV------SAVELNKLIPHT 70
+RI R +A + + + A D+RY +++ H+ + A V I
Sbjct: 22 LIKRIERQMFAKRKAALFKPAIDNRYSEDEIVAHNGLRYEAFVIPTDEEGVRTIGEITKR 81
Query: 71 KDIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
++ +VIGIDE QFFP +V + +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 82 ENFEVIGIDEVQFFPMSIVETLDRLADDGVYVIASGLNLDFKGDPFPVTRELLVRADNIV 141
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTAVC C R A ++R+
Sbjct: 142 YLTAVCTVCGRPATRSQRL 160
>gi|448430554|ref|ZP_21584813.1| thymidine kinase [Halorubrum tebenquichense DSM 14210]
gi|445689123|gb|ELZ41368.1| thymidine kinase [Halorubrum tebenquichense DSM 14210]
Length = 213
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 79/195 (40%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSA 210
EVI G MFSGKT EL+RR+RR + A + A DDRY + +H Q + T V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDN 70
Query: 211 VELNKL-IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L I +V+ IDE F S+ + VC
Sbjct: 71 EGDGPLDILDDDPAEVVAIDEANFF-----SNALIEVCN--------------------- 104
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++A+ G V+V+ D TF+ F + L+ AE V+KL A
Sbjct: 105 -------------------ALADRGSRVIVSGTDQTFRGEPFEPLPQLMATAEYVDKLQA 145
Query: 330 VCMSCFRDAAFTKRI 344
+C C A+ +R+
Sbjct: 146 ICSVCGEPASRNQRL 160
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD--QQKLTAVSAVELNKL-IPHTKD 72
RR+RR + A + A DDRY + +H Q + T V L I
Sbjct: 24 ELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDNEGDGPLDILDDDP 83
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+ IDE FF + ++ ++A+ G V+V+ D TF+ F + L+ AE V+KL
Sbjct: 84 AEVVAIDEANFFSNALIEVCNALADRGSRVIVSGTDQTFRGEPFEPLPQLMATAEYVDKL 143
Query: 132 TAVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 144 QAICSVCGEPASRNQRL 160
>gi|448493764|ref|ZP_21609195.1| thymidine kinase [Halorubrum californiensis DSM 19288]
gi|445689940|gb|ELZ42162.1| thymidine kinase [Halorubrum californiensis DSM 19288]
Length = 213
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 80/195 (41%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSA 210
EVI G MFSGKT EL+RR+RR + A + A DDRY + +H Q + T V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDN 70
Query: 211 VELNKL-IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L I + +V+ +DE F S+ + VC
Sbjct: 71 EGDGPLDILDDEPAEVVAVDEANFF-----SNALIEVCN--------------------- 104
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++A+ G V+V+ D TF+ F + L+ AE V+KL A
Sbjct: 105 -------------------ALADRGSRVIVSGTDQTFRGEPFEPLPQLMATAEYVDKLQA 145
Query: 330 VCMSCFRDAAFTKRI 344
+C C A+ +R+
Sbjct: 146 ICSVCGEPASRNQRL 160
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD--QQKLTAVSAVELNKL-IPHTKD 72
RR+RR + A + A DDRY + +H Q + T V L I +
Sbjct: 24 ELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDNEGDGPLDILDDEP 83
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+V+ +DE FF + ++ ++A+ G V+V+ D TF+ F + L+ AE V+KL
Sbjct: 84 AEVVAVDEANFFSNALIEVCNALADRGSRVIVSGTDQTFRGEPFEPLPQLMATAEYVDKL 143
Query: 132 TAVCMSCFRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDR 191
A+C C A+ +R+ + + P + T L+ Y+ C ++ DR
Sbjct: 144 QAICSVCGEPASRNQRLIEGE-----PAHADDPTILVGAEESYEARCRDCHVLLTG--DR 196
Query: 192 YDTEK 196
D E+
Sbjct: 197 PDEER 201
>gi|26554479|ref|NP_758413.1| thymidine kinase [Mycoplasma penetrans HF-2]
gi|38258128|sp|Q8EU99.1|KITH_MYCPE RecName: Full=Thymidine kinase
gi|26454489|dbj|BAC44817.1| thymidine kinase [Mycoplasma penetrans HF-2]
Length = 220
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 51/213 (23%)
Query: 140 RDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVST 199
++ AF K G E+I GPMF+GK+ EL+R+++R YA+ + + D R K+ +
Sbjct: 2 KNNAFGKEKGW-IELIYGPMFAGKSEELLRKLKRLDYADVIYQVFKPKIDTR-TKNKIMS 59
Query: 200 HDQQKLTAV---SAVEL-NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKA 255
D + + + + E+ +KL+ + V+ IDE QF
Sbjct: 60 RDGRNMDSFEFDNPYEIFDKLLSLEVNPHVVAIDEAQF---------------------- 97
Query: 256 PIKRSPFKTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDIL 315
A+E+ +V +++A++G IV V+ALD F+ F
Sbjct: 98 ----------ADES-------------IVDVCQALADSGYIVYVSALDKNFKNEPFMVTA 134
Query: 316 SLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEK 348
+ +AE VEKL+A+C C T+RI +K
Sbjct: 135 KIACIAEYVEKLSAICTDCGAPGTATQRIINDK 167
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV---SAVEL-NKLIPHTKDID 74
R+++R YA+ + + D R K+ + D + + + + E+ +KL+ +
Sbjct: 30 RKLKRLDYADVIYQVFKPKIDTR-TKNKIMSRDGRNMDSFEFDNPYEIFDKLLSLEVNPH 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
V+ IDE QF + +V +++A++G IV V+ALD F+ F + +AE VEKL+A
Sbjct: 89 VVAIDEAQFADESIVDVCQALADSGYIVYVSALDKNFKNEPFMVTAKIACIAEYVEKLSA 148
Query: 134 VCMSCFRDAAFTKRIGQEK 152
+C C T+RI +K
Sbjct: 149 ICTDCGAPGTATQRIINDK 167
>gi|448498906|ref|ZP_21611087.1| thymidine kinase [Halorubrum coriense DSM 10284]
gi|445697920|gb|ELZ49976.1| thymidine kinase [Halorubrum coriense DSM 10284]
Length = 213
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 80/195 (41%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSA 210
EVI G MFSGKT EL+RR+RR + A + + A DDRY + +H Q + T V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHTGRQWEATVVDN 70
Query: 211 VELNKL-IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L I +V+ IDE F S+ + VC
Sbjct: 71 EGDGPLDILDDDPAEVVAIDEANFF-----SEALIEVCN--------------------- 104
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++A+ G V+V+ D TF+ F + ++ AE V+KL A
Sbjct: 105 -------------------TLADRGSRVIVSGTDQTFRGEPFEPLPRIMATAEYVDKLQA 145
Query: 330 VCMSCFRDAAFTKRI 344
+C C A+ +R+
Sbjct: 146 ICSVCGEPASRNQRL 160
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD--QQKLTAVSAVELNKL-IPHTKDI 73
RR+RR + A + + A DDRY + +H Q + T V L I
Sbjct: 25 LLRRLRRSEIAGQSVAVYKPAVDDRYGETTIGSHTGRQWEATVVDNEGDGPLDILDDDPA 84
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+V+ IDE FF + ++ ++A+ G V+V+ D TF+ F + ++ AE V+KL
Sbjct: 85 EVVAIDEANFFSEALIEVCNTLADRGSRVIVSGTDQTFRGEPFEPLPRIMATAEYVDKLQ 144
Query: 133 AVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 145 AICSVCGEPASRNQRL 160
>gi|374324580|ref|YP_005077709.1| thymidine kinase [Paenibacillus terrae HPL-003]
gi|357203589|gb|AET61486.1| thymidine kinase [Paenibacillus terrae HPL-003]
Length = 198
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 14 IVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE------LNKLI 67
++ C+++ QY + + + + A+D+RY +++ + +L A+S + + +++
Sbjct: 21 LIRRCQKL--IQYGHRKVVAYKPAEDNRYAKDEIVSRIGYRLPAISIPKKLTDELVQQIL 78
Query: 68 PHTKDIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
TKD DV+ DE QFF +++ E +A GK V+ L+ ++ F + L+ +A+
Sbjct: 79 EETKDADVVAFDEVQFFSRHIMTLVEELAYCGKHVIADGLNLDYRGKEFGYVGGLLAMAD 138
Query: 127 CVEKLTAVCMSC-FRDAAFTKRIGQEKEVILGPM 159
+EKL + C C +A +T+R+ K +GP+
Sbjct: 139 DIEKLASFCAVCGSSEAVYTQRMVNGKPSTVGPI 172
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 53/199 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRY-QYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I GPMFS K+ ELIRR ++ QY + + + + A+D+RY +++ + +L A+S +
Sbjct: 8 IITGPMFSEKSGELIRRCQKLIQYGHRKVVAYKPAEDNRYAKDEIVSRIGYRLPAISIPK 67
Query: 213 ------LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ +++ TKD DV+ DE QF
Sbjct: 68 KLTDELVQQILEETKDADVVAFDEVQFFS------------------------------- 96
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+++ E +A GK V+ L+ ++ F + L+ +A+ +EK
Sbjct: 97 --------------RHIMTLVEELAYCGKHVIADGLNLDYRGKEFGYVGGLLAMADDIEK 142
Query: 327 LTAVCMSC-FRDAAFTKRI 344
L + C C +A +T+R+
Sbjct: 143 LASFCAVCGSSEAVYTQRM 161
>gi|325845254|ref|ZP_08168558.1| thymidine kinase [Turicibacter sp. HGF1]
gi|325488695|gb|EGC91100.1| thymidine kinase [Turicibacter sp. HGF1]
Length = 201
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G M++GKT ELIRR++R +A + + D+RY ++V +H K+ ++
Sbjct: 11 EAICGSMYAGKTEELIRRLKRLDFARRPYCLFKPVIDNRYSEDEVVSHSGLKMPSIPIEH 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H T + + IDE QF E EN
Sbjct: 71 PIQILDHITDETYAVAIDEVQFFE--------------------------------EN-- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
VV E +A+ G V+VA LD F+ F + L+ +E V KLT++C
Sbjct: 97 -----------VVDVVEYLADRGIRVIVAGLDKDFRGEPFGTMPILLTKSEFVTKLTSIC 145
Query: 332 MSCFRDAAFTKRI 344
C A ++R+
Sbjct: 146 SVCGAPATRSQRL 158
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR++R +A + + D+RY ++V +H K+ ++ +++ H T + +
Sbjct: 27 RRLKRLDFARRPYCLFKPVIDNRYSEDEVVSHSGLKMPSIPIEHPIQILDHITDETYAVA 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + VV E +A+ G V+VA LD F+ F + L+ +E V KLT++C
Sbjct: 87 IDEVQFFEENVVDVVEYLADRGIRVIVAGLDKDFRGEPFGTMPILLTKSEFVTKLTSICS 146
Query: 137 SCFRDAAFTKRI 148
C A ++R+
Sbjct: 147 VCGAPATRSQRL 158
>gi|448537619|ref|ZP_21622631.1| thymidine kinase [Halorubrum hochstenium ATCC 700873]
gi|445702007|gb|ELZ53977.1| thymidine kinase [Halorubrum hochstenium ATCC 700873]
Length = 213
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 79/195 (40%), Gaps = 48/195 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSA 210
EVI G MFSGKT EL+RR+RR + A + A DDRY + +H Q + T V
Sbjct: 11 EVISGSMFSGKTEELLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDN 70
Query: 211 VELNKL-IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
L I +V+ IDE F S+ + VC
Sbjct: 71 EGDGPLDILDDDPAEVVAIDEANFF-----SNALIEVCN--------------------- 104
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++A+ G V+V+ D TF+ F + L+ AE V+KL A
Sbjct: 105 -------------------ALADRGSRVIVSGTDQTFRGEPFEPLPQLMATAEYVDKLQA 145
Query: 330 VCMSCFRDAAFTKRI 344
+C C A+ +R+
Sbjct: 146 ICSVCGEPASRNQRL 160
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD--QQKLTAVSAVELNKL-IPHTKDI 73
RR+RR + A + A DDRY + +H Q + T V L I
Sbjct: 25 LLRRLRRSEIAGQSVAVYTPAIDDRYGEATIGSHTGRQWEATVVDNEGDGPLDILDDDPA 84
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+V+ IDE FF + ++ ++A+ G V+V+ D TF+ F + L+ AE V+KL
Sbjct: 85 EVVAIDEANFFSNALIEVCNALADRGSRVIVSGTDQTFRGEPFEPLPQLMATAEYVDKLQ 144
Query: 133 AVCMSCFRDAAFTKRI 148
A+C C A+ +R+
Sbjct: 145 AICSVCGEPASRNQRL 160
>gi|344236865|gb|EGV92968.1| Thymidine kinase, cytosolic [Cricetulus griseus]
Length = 122
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 55 LTAVSAVELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTG 114
+ A+ A L + D+ V GIDE QFFPD+V F E MANAGK V+VAALD TFQR
Sbjct: 1 MDALPACLLRDVAQEALDVAVTGIDEEQFFPDIVEFCEVMANAGKTVIVAALDRTFQRK- 59
Query: 115 FNDILSLIPLAECVEKLTAVCMSCF 139
+ + +K +VC C+
Sbjct: 60 -------VEVIGGADKYHSVCRVCY 77
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 8/56 (14%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 335
FPD+V F E MANAGK V+VAALD TFQR + + +K +VC C+
Sbjct: 30 FPDIVEFCEVMANAGKTVIVAALDRTFQRK--------VEVIGGADKYHSVCRVCY 77
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 30/84 (35%)
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQF------------------------------V 234
+ A+ A L + D+ V GIDE QF V
Sbjct: 1 MDALPACLLRDVAQEALDVAVTGIDEEQFFPDIVEFCEVMANAGKTVIVAALDRTFQRKV 60
Query: 235 EVIGGSDKYMAVCRECYKQKAPIK 258
EVIGG+DKY +VCR CY +K+ ++
Sbjct: 61 EVIGGADKYHSVCRVCYFKKSSVQ 84
>gi|223478775|ref|YP_002582930.1| thymidine kinase [Thermococcus sp. AM4]
gi|214034001|gb|EEB74827.1| Thymidine kinase [Thermococcus sp. AM4]
Length = 194
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 67/206 (32%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMF+GKTTELI+RI R +A + + + + D RY TE+V H+ + A
Sbjct: 8 EVITGPMFAGKTTELIKRIERQAFARRKVALFKPSIDTRYSTEEVVAHNGLRYEAF---- 63
Query: 213 LNKLIPHTKD-------------IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKR 259
++P D +VIG+DE QF
Sbjct: 64 ---VVPTNGDGVASIMETTIREKYEVIGVDEVQF-------------------------- 94
Query: 260 SPFKTLANENAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLI 318
FP ++V + +A+ G V+ + L+ F+ F + L+
Sbjct: 95 --------------------FPMEIVEVLDKLADDGVYVIASGLNLDFKGDPFPVMKELL 134
Query: 319 PLAECVEKLTAVCMSCFRDAAFTKRI 344
A+ + LTAVC C R A ++R+
Sbjct: 135 VRADNIVYLTAVCTVCGRPATRSQRL 160
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 21/146 (14%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD---- 72
+RI R +A + + + + D RY TE+V H+ + A ++P D
Sbjct: 22 LIKRIERQAFARRKVALFKPSIDTRYSTEEVVAHNGLRYEAF-------VVPTNGDGVAS 74
Query: 73 ---------IDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLI 122
+VIG+DE QFFP ++V + +A+ G V+ + L+ F+ F + L+
Sbjct: 75 IMETTIREKYEVIGVDEVQFFPMEIVEVLDKLADDGVYVIASGLNLDFKGDPFPVMKELL 134
Query: 123 PLAECVEKLTAVCMSCFRDAAFTKRI 148
A+ + LTAVC C R A ++R+
Sbjct: 135 VRADNIVYLTAVCTVCGRPATRSQRL 160
>gi|357289813|gb|AET73126.1| thymidine kinase [Phaeocystis globosa virus 12T]
gi|357292613|gb|AET73949.1| thymidine kinase [Phaeocystis globosa virus 14T]
Length = 184
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 27 ANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIPHTKDIDV------IGID 79
NY C+ + Y D RY D K+ +HD+ L +S +LN+L + + +D+ I I+
Sbjct: 27 TNYNCLAINYIFDKRYTDKSKIVSHDKVALNCISIQDLNELTNNPEYLDMFCKAEYIFIN 86
Query: 80 EGQFFPDVVSFA-ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
E QFF D+ + SM K VV+ L+ ++R F +++ L A + + C C
Sbjct: 87 EAQFFVDLKKWVINSMDIHNKNVVLCGLNLDYKREKFGELMDLTMYATNIVQTFGKCYDC 146
Query: 139 FRDAAFTKR-IGQEKEVILGP 158
+ FT R + +V++G
Sbjct: 147 ENSSLFTHRLVDDNSQVLIGS 167
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 55/200 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAV 211
E+I+G MFSGKTT LI + + NY C+ + Y D RY D K+ +HD+ L +S
Sbjct: 4 EIIIGCMFSGKTTALIEKYME-KSTNYNCLAINYIFDKRYTDKSKIVSHDKVALNCISIQ 62
Query: 212 ELNKLIPHTKDIDV------IGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTL 265
+LN+L + + +D+ I I+E QF
Sbjct: 63 DLNELTNNPEYLDMFCKAEYIFINEAQF-------------------------------- 90
Query: 266 ANENAALNVPPPPEFPDVVSFA-ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
F D+ + SM K VV+ L+ ++R F +++ L A +
Sbjct: 91 --------------FVDLKKWVINSMDIHNKNVVLCGLNLDYKREKFGELMDLTMYATNI 136
Query: 325 EKLTAVCMSCFRDAAFTKRI 344
+ C C + FT R+
Sbjct: 137 VQTFGKCYDCENSSLFTHRL 156
>gi|293376064|ref|ZP_06622316.1| thymidine kinase [Turicibacter sanguinis PC909]
gi|292645322|gb|EFF63380.1| thymidine kinase [Turicibacter sanguinis PC909]
Length = 201
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 46/193 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G M++GKT ELIRR++R +A + + D+RY ++V +H K+ ++
Sbjct: 11 EAICGSMYAGKTEELIRRLKRLDFARRPYCLFKPVIDNRYSEDEVVSHSGLKMPSIPIEH 70
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H D + IDE QF E EN
Sbjct: 71 PIQILDHITDKTYAVAIDEVQFFE--------------------------------EN-- 96
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
VV E +A+ G V+VA LD F+ F + L+ +E V KLT++C
Sbjct: 97 -----------VVDVVEYLADRGIRVIVAGLDKDFRGEPFGTMPILLTKSEFVTKLTSIC 145
Query: 332 MSCFRDAAFTKRI 344
C A ++R+
Sbjct: 146 SVCGAPATRSQRL 158
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIG 77
RR++R +A + + D+RY ++V +H K+ ++ +++ H D +
Sbjct: 27 RRLKRLDFARRPYCLFKPVIDNRYSEDEVVSHSGLKMPSIPIEHPIQILDHITDKTYAVA 86
Query: 78 IDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE QFF + VV E +A+ G V+VA LD F+ F + L+ +E V KLT++C
Sbjct: 87 IDEVQFFEENVVDVVEYLADRGIRVIVAGLDKDFRGEPFGTMPILLTKSEFVTKLTSICS 146
Query: 137 SCFRDAAFTKRI 148
C A ++R+
Sbjct: 147 VCGAPATRSQRL 158
>gi|258647454|ref|ZP_05734923.1| thymidine kinase [Prevotella tannerae ATCC 51259]
gi|260852726|gb|EEX72595.1| thymidine kinase [Prevotella tannerae ATCC 51259]
Length = 116
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DVIGIDE QFF D +V ++AN GK V+VA LD F+ F + +L+ +A+ V K+
Sbjct: 8 DVIGIDEAQFFDDSLVDVCNTLANKGKRVIVAGLDMDFRGLPFGPMPALLAIADEVTKVR 67
Query: 133 AVCMSCFRDAAFTKRI-GQEKEVILG 157
A+C+ C A + RI EK+V+LG
Sbjct: 68 AICLRCGNLAYVSHRIVKSEKQVLLG 93
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 265 LANENAALNVPPPPEFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
LA E + + F D +V ++AN GK V+VA LD F+ F + +L+ +A+
Sbjct: 3 LAAEADVIGIDEAQFFDDSLVDVCNTLANKGKRVIVAGLDMDFRGLPFGPMPALLAIADE 62
Query: 324 VEKLTAVCMSCFRDAAFTKRI-GQEKEVRI 352
V K+ A+C+ C A + RI EK+V +
Sbjct: 63 VTKVRAICLRCGNLAYVSHRIVKSEKQVLL 92
>gi|451943786|ref|YP_007464422.1| thymidine kinase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451903173|gb|AGF72060.1| thymidine kinase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 190
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 78/191 (40%), Gaps = 47/191 (24%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD--QQKLTAVSAV 211
VI GPMF+GKT +L+ RIR + ++V +A DDRY V++H AV+
Sbjct: 11 VITGPMFAGKTEDLLHRIRGARQQGDDVVVVTHALDDRYGRRIVASHTGLSTPAHAVTDA 70
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
E + + +D++ +DE QF +
Sbjct: 71 EAVAGLALARPVDLVAVDEAQFFGI----------------------------------- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V + +AG V +A L TF + I +L+ AE + KLTA C
Sbjct: 96 ----------GLVPVLNRILDAGIPVDIAGLCMTFDGGPYEPIATLMAHAEEITKLTAAC 145
Query: 332 MSCFRDAAFTK 342
C RDAAF +
Sbjct: 146 EICGRDAAFHQ 156
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHD--QQKLTAVSAVELNKLIPHTKDID 74
RIR + ++V +A DDRY VA+H AV+ E + + +D
Sbjct: 24 LLHRIRGARQQGDDVVVVTHALDDRYGRRIVASHTGLSTPAHAVTDAEAVAGLALARPVD 83
Query: 75 VIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
++ +DE QFF +V + +AG V +A L TF + I +L+ AE + KLTA
Sbjct: 84 LVAVDEAQFFGIGLVPVLNRILDAGIPVDIAGLCMTFDGGPYEPIATLMAHAEEITKLTA 143
Query: 134 VCMSCFRDAAFTK 146
C C RDAAF +
Sbjct: 144 ACEICGRDAAFHQ 156
>gi|4973435|gb|AAD35091.1| thymidine kinase [Mus musculus]
Length = 55
Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 310 GFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV +
Sbjct: 1 AFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEV 43
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/41 (70%), Positives = 34/41 (82%)
Query: 114 GFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
F IL+L+PLAE V KLTAVCM CFR+AA+TKR+G EKEV
Sbjct: 1 AFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEV 41
>gi|320108306|ref|YP_004183896.1| thymidine kinase [Terriglobus saanensis SP1PR4]
gi|319926827|gb|ADV83902.1| Thymidine kinase [Terriglobus saanensis SP1PR4]
Length = 206
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKDID 74
RR++R + A R + D RY +A+H +Q A +A L + + T+ ID
Sbjct: 27 RRLKRARIARQRVACFKPDIDLRYHRTHIASHSEQTHEAAVVTPNAERLREALFSTRQID 86
Query: 75 VIGIDEG---QFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
+ + QFF + ++ + GK V++A LD TF F + +L+ LA+ V K
Sbjct: 87 EVEVVGVDEVQFFDEGILPLTMELVALGKRVIMAGLDTTFTAEPFGPVPNLMALADKVTK 146
Query: 131 LTAVCMSCFRDAAFTKRIGQEKEVIL 156
L+AVCM C + A T+R+G +E+++
Sbjct: 147 LSAVCMVCGQPAIHTQRLGHSQELVV 172
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 283 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 342
++ + GK V++A LD TF F + +L+ LA+ V KL+AVCM C + A T+
Sbjct: 103 ILPLTMELVALGKRVIMAGLDTTFTAEPFGPVPNLMALADKVTKLSAVCMVCGQPAIHTQ 162
Query: 343 RIGQEKEV 350
R+G +E+
Sbjct: 163 RLGHSQEL 170
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
EV++GPMFSGK+ ELIRR++R + A R + D RY +++H +Q
Sbjct: 11 EVVVGPMFSGKSEELIRRLKRARIARQRVACFKPDIDLRYHRTHIASHSEQ 61
>gi|419704084|ref|ZP_14231635.1| thymidine kinase [Mycoplasma canis PG 14]
gi|384393396|gb|EIE39846.1| thymidine kinase [Mycoplasma canis PG 14]
Length = 193
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 46/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPMFSGKT EL++RI+ + M+ + + D R+D +K+ + K A+
Sbjct: 11 EIITGPMFSGKTEELLKRIKILEITEINTMVFKPSFDTRFDAKKIVSRTGAKTKAIVIKN 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H ++ + IDE F++
Sbjct: 71 SKEILDHWNEEYKAVAIDEVNFLD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+ + + +G V+ + LD F R F L+ +A+ V+KL AVC
Sbjct: 95 ---------EGIFEVIDKLVLSGVRVIASGLDMDFLRRPFGVTPGLLAIADEVKKLKAVC 145
Query: 332 MSCFRDAAFTKR 343
+ C DAAF+ R
Sbjct: 146 LVCKSDAAFSFR 157
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDID 74
+RI+ + M+ + + D R+D +K+ + K A+ +++ H ++
Sbjct: 24 ELLKRIKILEITEINTMVFKPSFDTRFDAKKIVSRTGAKTKAIVIKNSKEILDHWNEEYK 83
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+ IDE F + + + + +G V+ + LD F R F L+ +A+ V+KL A
Sbjct: 84 AVAIDEVNFLDEGIFEVIDKLVLSGVRVIASGLDMDFLRRPFGVTPGLLAIADEVKKLKA 143
Query: 134 VCMSCFRDAAFTKR 147
VC+ C DAAF+ R
Sbjct: 144 VCLVCKSDAAFSFR 157
>gi|327310755|ref|YP_004337652.1| thymidine kinase [Thermoproteus uzoniensis 768-20]
gi|326947234|gb|AEA12340.1| Thymidine kinase [Thermoproteus uzoniensis 768-20]
Length = 192
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 50/194 (25%)
Query: 155 ILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV----SA 210
I+GPMF+GKTTELIRR+ R A + + + D RYD V+ H+ +L A
Sbjct: 5 IVGPMFAGKTTELIRRVERQIIAGRSAAVFKPSIDSRYDALSVAAHNGLRLKAFVVPPDE 64
Query: 211 VELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ + + DV+ +DE QF
Sbjct: 65 SGVAAIAEEGERYDVVAVDEVQF------------------------------------- 87
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
FP ++ A G++V+ A L+ ++ F + ++ A+ V LTAV
Sbjct: 88 ---------FPPSLAEALDRLAYGRLVIAAGLNLDYRGEPFETTMRIMAYADKVVSLTAV 138
Query: 331 CMSCFRDAAFTKRI 344
C C R A T+R+
Sbjct: 139 CKVCGRPATRTQRL 152
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 10/167 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAV----SAVELNKLIPHTKD 72
RR+ R A + + + D RYD VA H+ +L A + + +
Sbjct: 17 LIRRVERQIIAGRSAAVFKPSIDSRYDALSVAAHNGLRLKAFVVPPDESGVAAIAEEGER 76
Query: 73 IDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
DV+ +DE QFFP ++ A G++V+ A L+ ++ F + ++ A+ V LT
Sbjct: 77 YDVVAVDEVQFFPPSLAEALDRLAYGRLVIAAGLNLDYRGEPFETTMRIMAYADKVVSLT 136
Query: 133 AVCMSCFRDAAFTKR-IGQEKEVILGP---MFSGKTTELIRRIRRYQ 175
AVC C R A T+R IG GP + G+T E R RR+
Sbjct: 137 AVCKVCGRPATRTQRLIGGRPAPADGPRILVGGGETYEA--RCRRHH 181
>gi|148377963|ref|YP_001256839.1| thymidine kinase [Mycoplasma agalactiae PG2]
gi|148292009|emb|CAL59401.1| Thymidine kinase [Mycoplasma agalactiae PG2]
Length = 190
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 44/200 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT EL++RI + A ++++ D R+ ++ + K A++
Sbjct: 11 EVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSENEIVSRTGAKHKAINVSS 70
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ H S KYM V I F
Sbjct: 71 SKEILDHW-------------------STKYMCV---------AIDEVNFMD-------- 94
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D++S E + G V+ + LD F+R F+ + ++ A+ + KL AVC+
Sbjct: 95 --------EDILSVIEELIYKGVKVICSGLDMDFKRRPFDVMAKVLASADSILKLKAVCL 146
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C DA F+ R + E+ +
Sbjct: 147 ECKSDAGFSFRKVKSDELNL 166
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
+RI + A ++++ D R+ ++ + K A++ +++ H + +
Sbjct: 27 KRINILKIAGINSLVIKPKFDTRFSENEIVSRTGAKHKAINVSSSKEILDHWSTKYMCVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE F D++S E + G V+ + LD F+R F+ + ++ A+ + KL AVC+
Sbjct: 87 IDEVNFMDEDILSVIEELIYKGVKVICSGLDMDFKRRPFDVMAKVLASADSILKLKAVCL 146
Query: 137 SCFRDAAFTKR 147
C DA F+ R
Sbjct: 147 ECKSDAGFSFR 157
>gi|241180928|ref|XP_002400382.1| thymidine kinase, putative [Ixodes scapularis]
gi|215495273|gb|EEC04914.1| thymidine kinase, putative [Ixodes scapularis]
Length = 98
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 53/104 (50%), Gaps = 31/104 (29%)
Query: 55 LTAVSAVELNKLIPHTKDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTG 114
+ A+ A L +L D VIGIDEGQF G
Sbjct: 1 MPAIKARTLAELGNLEADFRVIGIDEGQF------------------------------G 30
Query: 115 FNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV-ILG 157
F I+ L+PL+E V KLTAVCM C+ +A++TKR+G EKEV I+G
Sbjct: 31 FPTIMELVPLSESVIKLTAVCMICYAEASYTKRLGMEKEVEIIG 74
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 298 VVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
V+ +G F GF I+ L+PL+E V KLTAVCM C+ +A++TKR+G EKEV I
Sbjct: 21 VIGIDEGQF---GFPTIMELVPLSESVIKLTAVCMICYAEASYTKRLGMEKEVEI 72
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 40/90 (44%)
Query: 205 LTAVSAVELNKLIPHTKDIDVIGIDEGQF------------------------------- 233
+ A+ A L +L D VIGIDEGQF
Sbjct: 1 MPAIKARTLAELGNLEADFRVIGIDEGQFGFPTIMELVPLSESVIKLTAVCMICYAEASY 60
Query: 234 ---------VEVIGGSDKYMAVCRECYKQK 254
VE+IGG+DKYMAVCR CY ++
Sbjct: 61 TKRLGMEKEVEIIGGADKYMAVCRSCYSKE 90
>gi|240102565|ref|YP_002958874.1| thymidine kinase [Thermococcus gammatolerans EJ3]
gi|239910119|gb|ACS33010.1| Thymidine kinase (tdk) [Thermococcus gammatolerans EJ3]
Length = 194
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 53/199 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
EVI GPMF+GKTTELI+RI R +A + + + + D RY E+V H+ + A V
Sbjct: 8 EVITGPMFAGKTTELIKRIERQAFARRKVALFKPSIDTRYSKEEVVAHNGLRYEAFVVPT 67
Query: 212 ELN---KLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ N +++ T + +VIGIDE QF
Sbjct: 68 DENGVRRIMETTIREGFEVIGIDEVQF--------------------------------- 94
Query: 267 NENAALNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 325
FP ++V +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 95 -------------FPIEIVDVLNRLADEGVYVIASGLNLDFKGDPFPVTRELLVRADNIV 141
Query: 326 KLTAVCMSCFRDAAFTKRI 344
LTAVC C R A ++R+
Sbjct: 142 YLTAVCTVCGRPATRSQRL 160
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELN---KLIPHT-- 70
+RI R +A + + + + D RY E+V H+ + A V + N +++ T
Sbjct: 22 LIKRIERQAFARRKVALFKPSIDTRYSKEEVVAHNGLRYEAFVVPTDENGVRRIMETTIR 81
Query: 71 KDIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
+ +VIGIDE QFFP ++V +A+ G V+ + L+ F+ F L+ A+ +
Sbjct: 82 EGFEVIGIDEVQFFPIEIVDVLNRLADEGVYVIASGLNLDFKGDPFPVTRELLVRADNIV 141
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTAVC C R A ++R+
Sbjct: 142 YLTAVCTVCGRPATRSQRL 160
>gi|390453402|ref|ZP_10238930.1| thymidine kinase [Paenibacillus peoriae KCTC 3763]
Length = 198
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 8/143 (5%)
Query: 25 QYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVE------LNKLIPHTKDIDVIGI 78
QY + + + + A+D+RY +++ + +L A+S + +++ TK+ DV+
Sbjct: 30 QYGHRKVIAYKPAEDNRYAKDEIVSRIGYRLPAISIPRKLTDELVQRILEETKEADVVAF 89
Query: 79 DEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 137
DE QFF +++ + +A GK V+ L+ + F I L+ +A+ +EKLT+ C
Sbjct: 90 DEVQFFSRHIMALIQELAYCGKHVIADGLNLDCRGKEFGYIGGLLAMADDIEKLTSFCAV 149
Query: 138 C-FRDAAFTKRIGQEKEVILGPM 159
C +A FT+R+ K +GP+
Sbjct: 150 CGSSEAVFTQRMVNGKPSTVGPI 172
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 53/199 (26%)
Query: 154 VILGPMFSGKTTELIRRIRRY-QYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
+I GPMFS K+ ELIRR ++ QY + + + + A+D+RY +++ + +L A+S
Sbjct: 8 IITGPMFSEKSGELIRRCQKLIQYGHRKVIAYKPAEDNRYAKDEIVSRIGYRLPAISIPR 67
Query: 213 ------LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
+ +++ TK+ DV+ DE QF S MA+ +E
Sbjct: 68 KLTDELVQRILEETKEADVVAFDEVQFF-----SRHIMALIQE----------------- 105
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
+A GK V+ L+ + F I L+ +A+ +EK
Sbjct: 106 -----------------------LAYCGKHVIADGLNLDCRGKEFGYIGGLLAMADDIEK 142
Query: 327 LTAVCMSC-FRDAAFTKRI 344
LT+ C C +A FT+R+
Sbjct: 143 LTSFCAVCGSSEAVFTQRM 161
>gi|371776208|ref|ZP_09482530.1| thymidine kinase [Anaerophaga sp. HS1]
Length = 193
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 39 DDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFFPDVVS-FAESMANA 97
D+RY ++V +HD + + ++ ++DV+GIDE QFF ++ +AN
Sbjct: 53 DNRYSEQEVVSHDANSIPSTPVESSGNILLLCSNVDVVGIDEAQFFDKGLNDVCNQLANQ 112
Query: 98 GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKR 147
G V+VA LD F+ F + L+ AE V K+ A+C+ C A F+ R
Sbjct: 113 GIRVIVAGLDMDFKGKPFGPMPDLMASAEYVTKVHAICVYCGDLAHFSLR 162
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 45/191 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI G MFSGKT EL+RR+RR + A R I + D+RY ++V +HD + +
Sbjct: 17 EVITGSMFSGKTEELLRRLRRARIARQRVEIFKPLVDNRYSEQEVVSHDANSIPSTPVES 76
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
++ ++DV+GIDE QF + G +D VC +
Sbjct: 77 SGNILLLCSNVDVVGIDEAQFFDK-GLND----VCNQ----------------------- 108
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
+AN G V+VA LD F+ F + L+ AE V K+ A+C+
Sbjct: 109 -----------------LANQGIRVIVAGLDMDFKGKPFGPMPDLMASAEYVTKVHAICV 151
Query: 333 SCFRDAAFTKR 343
C A F+ R
Sbjct: 152 YCGDLAHFSLR 162
>gi|383763017|ref|YP_005441999.1| thymidine kinase [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381383285|dbj|BAM00102.1| thymidine kinase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 196
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 33 IVRYAKDDRYDTEKVATHD----QQKLTAVSAVEL-NKLIPHTKDIDVIGIDEGQFFPD- 86
+ + A D+RY ++A+H+ + + A E+ +L P D +V+ IDE QFF +
Sbjct: 43 LFKPAIDNRYGLVRIASHNGLAREDAVVVACAQEIVERLEP---DTEVVAIDEVQFFDEA 99
Query: 87 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
VV + +AN G V+VA LD F+ F + L+ LAE V+KL A+C+ C A+ T+
Sbjct: 100 VVEVCDHLANRGLRVIVAGLDQDFRGEPFGPMPRLMALAEMVDKLQAICVICGAPASRTQ 159
Query: 147 RI 148
R+
Sbjct: 160 RL 161
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 53/204 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD----QQKLTAV 208
E+I G MFSGKT EL+RRIRR + A + + + A D+RY ++++H+ + +
Sbjct: 13 ELICGSMFSGKTEELLRRIRRAEIARKKVQLFKPAIDNRYGLVRIASHNGLAREDAVVVA 72
Query: 209 SAVEL-NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
A E+ +L P D +V+ IDE QF +
Sbjct: 73 CAQEIVERLEP---DTEVVAIDEVQFFDEA------------------------------ 99
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
VV + +AN G V+VA LD F+ F + L+ LAE V+KL
Sbjct: 100 ---------------VVEVCDHLANRGLRVIVAGLDQDFRGEPFGPMPRLMALAEMVDKL 144
Query: 328 TAVCMSCFRDAAFTKRIGQEKEVR 351
A+C+ C A+ T+R+ K R
Sbjct: 145 QAICVICGAPASRTQRLIDGKPAR 168
>gi|39938590|ref|NP_950356.1| thymidine kinase [Onion yellows phytoplasma OY-M]
gi|60390030|sp|Q6YRB1.1|KITH_ONYPE RecName: Full=Thymidine kinase
gi|39721699|dbj|BAD04189.1| thymidine kinase [Onion yellows phytoplasma OY-M]
Length = 209
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 47/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDT-EKVSTHDQQKLTAVSAV 211
EV+ GPMF+GKT LI+R + N + + + DDRY E++ +H+Q + A+
Sbjct: 12 EVVCGPMFAGKTEALIQRSNQALQLNKKILSFKPQIDDRYSVKEEIVSHNQNTIPAILID 71
Query: 212 ELNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ ++P T +I+V+ IDE QF++
Sbjct: 72 KSKDILPFITPEINVVIIDEAQFLD----------------------------------- 96
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
D+V+ + +AN V+++ L+ F F + L+ +A+ V KLT++
Sbjct: 97 ----------NDIVAIVDYLANCNIEVIISGLELDFCGKPFGPMPYLLAIADTVTKLTSI 146
Query: 331 CMSCFRDAAFTKRI 344
C + A T+R+
Sbjct: 147 CAISGKKANRTQRL 160
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 28 NYRCMIVRYAKDDRYDT-EKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIGIDEGQFFP 85
N + + + DDRY E++ +H+Q + A+ + ++P T +I+V+ IDE QF
Sbjct: 37 NKKILSFKPQIDDRYSVKEEIVSHNQNTIPAILIDKSKDILPFITPEINVVIIDEAQFLD 96
Query: 86 -DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAF 144
D+V+ + +AN V+++ L+ F F + L+ +A+ V KLT++C + A
Sbjct: 97 NDIVAIVDYLANCNIEVIISGLELDFCGKPFGPMPYLLAIADTVTKLTSICAISGKKANR 156
Query: 145 TKRI 148
T+R+
Sbjct: 157 TQRL 160
>gi|419808489|ref|ZP_14333393.1| Thymidine kinase [Mycoplasma agalactiae 14628]
gi|390605892|gb|EIN15265.1| Thymidine kinase [Mycoplasma agalactiae 14628]
Length = 190
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 44/200 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT EL++RI + A ++++ D R+ ++ + K A++
Sbjct: 11 EVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSENEIVSRTGAKHKAINVSS 70
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ H S KYM V I F
Sbjct: 71 SKEILDHW-------------------SPKYMCV---------AIDEVNFMD-------- 94
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D++S E + G V+ + LD F+R F+ + ++ A+ + KL AVC+
Sbjct: 95 --------EDILSVIEELIYKGVRVICSGLDMDFKRRPFDVMAKVLASADSILKLKAVCL 146
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C DA F+ R + E+ +
Sbjct: 147 ECKSDAGFSFRKVKSDELNL 166
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
+RI + A ++++ D R+ ++ + K A++ +++ H + +
Sbjct: 27 KRINILKIAGINSLVIKPKFDTRFSENEIVSRTGAKHKAINVSSSKEILDHWSPKYMCVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE F D++S E + G V+ + LD F+R F+ + ++ A+ + KL AVC+
Sbjct: 87 IDEVNFMDEDILSVIEELIYKGVRVICSGLDMDFKRRPFDVMAKVLASADSILKLKAVCL 146
Query: 137 SCFRDAAFTKR 147
C DA F+ R
Sbjct: 147 ECKSDAGFSFR 157
>gi|291320689|ref|YP_003515954.1| thymidine kinase [Mycoplasma agalactiae]
gi|290753025|emb|CBH41001.1| Thymidine kinase [Mycoplasma agalactiae]
Length = 190
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 44/200 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT EL++RI + A ++++ D R+ ++ + K A++
Sbjct: 11 EVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSDNEIVSRTGAKHKAINVSS 70
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++ H S KYM V I F
Sbjct: 71 SKEILDHW-------------------SPKYMCV---------AIDEVNFMD-------- 94
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D++S E + G V+ + LD F+R F+ + ++ A+ + KL AVC+
Sbjct: 95 --------EDILSVIEELIYKGVRVICSGLDMDFKRRPFDVMAKVLASADSILKLKAVCL 146
Query: 333 SCFRDAAFTKRIGQEKEVRI 352
C DA F+ R + E+ +
Sbjct: 147 ECKSDAGFSFRKVKSDELNL 166
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
+RI + A ++++ D R+ ++ + K A++ +++ H + +
Sbjct: 27 KRINILKIAGINSLVIKPKFDTRFSDNEIVSRTGAKHKAINVSSSKEILDHWSPKYMCVA 86
Query: 78 IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
IDE F D++S E + G V+ + LD F+R F+ + ++ A+ + KL AVC+
Sbjct: 87 IDEVNFMDEDILSVIEELIYKGVRVICSGLDMDFKRRPFDVMAKVLASADSILKLKAVCL 146
Query: 137 SCFRDAAFTKRIGQEKEV-ILG 157
C DA F+ R + E+ +LG
Sbjct: 147 ECKSDAGFSFRKVKSDELNLLG 168
>gi|315230581|ref|YP_004071017.1| thymidine kinase [Thermococcus barophilus MP]
gi|315183609|gb|ADT83794.1| thymidine kinase [Thermococcus barophilus MP]
Length = 192
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 51/198 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKL------T 206
EVI GPMF+GKTTELI+RI R +A + + + + D+RY +V H+ + T
Sbjct: 8 EVITGPMFAGKTTELIKRIERQIFAKRKAALFKPSIDNRYSESEVVAHNGLRYEAYVIPT 67
Query: 207 AVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLA 266
V++ I + ++VIG+DE QF PF +
Sbjct: 68 TEEGVKMIYEITERERLEVIGVDEVQFF--------------------------PFSIVE 101
Query: 267 NENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 326
N +A+ G V+ A L+ F+ F L+ A+ +
Sbjct: 102 TLN-------------------KLADEGVYVIAAGLNLDFKGDPFPVTKELLVRADNIVY 142
Query: 327 LTAVCMSCFRDAAFTKRI 344
LTA+C C A ++R+
Sbjct: 143 LTAICTVCGAPATRSQRL 160
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKL------TAVSAVELNKLIPHT 70
+RI R +A + + + + D+RY +V H+ + T V++ I
Sbjct: 22 LIKRIERQIFAKRKAALFKPSIDNRYSESEVVAHNGLRYEAYVIPTTEEGVKMIYEITER 81
Query: 71 KDIDVIGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
+ ++VIG+DE QFFP +V +A+ G V+ A L+ F+ F L+ A+ +
Sbjct: 82 ERLEVIGVDEVQFFPFSIVETLNKLADEGVYVIAAGLNLDFKGDPFPVTKELLVRADNIV 141
Query: 130 KLTAVCMSCFRDAAFTKRI 148
LTA+C C A ++R+
Sbjct: 142 YLTAICTVCGAPATRSQRL 160
>gi|327409783|ref|YP_004347203.1| thymidine kinase [Lausannevirus]
gi|326784957|gb|AEA07091.1| thymidine kinase [Lausannevirus]
Length = 186
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 74 DVIGIDEGQFFPD--VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+GIDE QFF + +V + NAGK+V+++ LDG + D L LIP A+ EK+
Sbjct: 82 DVVGIDEAQFFLEKTLVEDVMKIVNAGKVVIMSGLDGDSDQEEMGDYLKLIPKADKAEKM 141
Query: 132 TAVCMSC-----FRDAAFTKRIGQEKEVIL-GPMFSGKTTELIR 169
A C C + A F+KR+ + E IL G M++ E ++
Sbjct: 142 LAWCYFCAQGKRMKRAPFSKRLVENDEKILVGNMYASVCRECLK 185
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 56/207 (27%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E+I GPM SGKTTEL RR+ + ++ +D R + STH+++ L S
Sbjct: 8 EMIFGPMRSGKTTELRRRLGIFASLGFKVTCANSERDIRPGS-GFSTHNKE-LCEDSQNI 65
Query: 213 LNKLIPHTKDID-----VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+ + K+ID V+GIDE QF + +K ++
Sbjct: 66 FPQKVKKVKNIDIEGFDVVGIDEAQF-----------------FLEKTLVE--------- 99
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
DV+ + NAGK+V+++ LDG + D L LIP A+ EK+
Sbjct: 100 --------------DVMK----IVNAGKVVIMSGLDGDSDQEEMGDYLKLIPKADKAEKM 141
Query: 328 TAVCMSC-----FRDAAFTKRIGQEKE 349
A C C + A F+KR+ + E
Sbjct: 142 LAWCYFCAQGKRMKRAPFSKRLVENDE 168
>gi|308453434|ref|XP_003089439.1| hypothetical protein CRE_02730 [Caenorhabditis remanei]
gi|308240339|gb|EFO84291.1| hypothetical protein CRE_02730 [Caenorhabditis remanei]
Length = 194
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 34/117 (29%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
VILGPMFSGKTTEL+R R A C++V+YA ++
Sbjct: 40 VILGPMFSGKTTELLRLHDRQIIAKRTCVLVKYA-------------------GKPFPQI 80
Query: 214 NKLIPHT---KDIDVIGIDEG------------QFVEVIGGSDKYMAVCRECYKQKA 255
+ L+P+ K + + ++ G + VEVIGG+D Y A+CRECY QK+
Sbjct: 81 SLLLPYANEIKQVTAVCVECGSQANFSFRSTLDKKVEVIGGADTYTALCRECYVQKS 137
>gi|332800124|ref|YP_004461623.1| thymidine kinase [Tepidanaerobacter acetatoxydans Re1]
gi|332697859|gb|AEE92316.1| Thymidine kinase [Tepidanaerobacter acetatoxydans Re1]
Length = 187
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 6/147 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKD 72
F +RI ++A + +IV+ DDRY V +H+ +TA++ +E+ +LI +
Sbjct: 24 EFIKRIDELKWAKKKILIVKPMLDDRYGESCVMSHNGDNVTAINIKCPLEILELIKR-DN 82
Query: 73 IDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
DV+ IDE QFF +V + + ++G +V++ L+ T + F + ++ +A+ + L
Sbjct: 83 YDVVAIDEAQFFDKKIVQVIKDLRDSGFLVLITGLNTTAEGKPFGPMPEILCIADDITIL 142
Query: 132 TAVCMSCFRDAAFTKRI-GQEKEVILG 157
VC +C + A T + +++++++G
Sbjct: 143 YGVCAACGKPATKTLALFDKDQDIVVG 169
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 49/188 (26%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS---AVEL 213
G M++GKT E I+RI ++A + +IV+ DDRY V +H+ +TA++ +E+
Sbjct: 15 GAMYAGKTREFIKRIDELKWAKKKILIVKPMLDDRYGESCVMSHNGDNVTAINIKCPLEI 74
Query: 214 NKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
+LI + DV+ IDE QF +
Sbjct: 75 LELIKR-DNYDVVAIDEAQFFD-------------------------------------- 95
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
+V + + ++G +V++ L+ T + F + ++ +A+ + L VC +
Sbjct: 96 -------KKIVQVIKDLRDSGFLVLITGLNTTAEGKPFGPMPEILCIADDITILYGVCAA 148
Query: 334 CFRDAAFT 341
C + A T
Sbjct: 149 CGKPATKT 156
>gi|322511352|gb|ADX06660.1| putative thymidine kinase [Organic Lake phycodnavirus]
Length = 189
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
D I I+E QFFPD+ F K V + LDG F++ IL LIP V KL +
Sbjct: 89 DHIYINEAQFFPDLYDFVLDALKQQKNVYLYGLDGDFRQKKMGHILDLIPHCHEVVKLKS 148
Query: 134 VCMSCFRDAAFTKRI 148
VC C +DA ++KRI
Sbjct: 149 VCAKCQQDAIYSKRI 163
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAA 339
FPD+ F K V + LDG F++ IL LIP V KL +VC C +DA
Sbjct: 99 FPDLYDFVLDALKQQKNVYLYGLDGDFRQKKMGHILDLIPHCHEVVKLKSVCAKCQQDAI 158
Query: 340 FTKRI 344
++KRI
Sbjct: 159 YSKRI 163
>gi|4973433|gb|AAD35090.1| thymidine kinase [Mus musculus]
Length = 55
Score = 60.8 bits (146), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 310 GFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
F IL+L+PLAE V KLTAV M CFR+AA+TKR+G EKEV +
Sbjct: 1 AFGSILNLVPLAESVVKLTAVGMECFREAAYTKRLGLEKEVEV 43
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/41 (68%), Positives = 33/41 (80%)
Query: 114 GFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
F IL+L+PLAE V KLTAV M CFR+AA+TKR+G EKEV
Sbjct: 1 AFGSILNLVPLAESVVKLTAVGMECFREAAYTKRLGLEKEV 41
>gi|322511293|gb|ADX06603.1| putative thymidine kinase [Organic Lake phycodnavirus]
Length = 208
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 74 DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
D I I+E QFFPD+ F K V + LDG F++ IL LIP V KL +
Sbjct: 108 DHIYINEAQFFPDLYDFVLDALKQQKNVYLYGLDGDFRQKKMGHILDLIPHCHEVVKLKS 167
Query: 134 VCMSCFRDAAFTKRI 148
VC C +DA ++KRI
Sbjct: 168 VCAKCQQDAIYSKRI 182
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 280 FPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAA 339
FPD+ F K V + LDG F++ IL LIP V KL +VC C +DA
Sbjct: 118 FPDLYDFVLDALKQQKNVYLYGLDGDFRQKKMGHILDLIPHCHEVVKLKSVCAKCQQDAI 177
Query: 340 FTKRI 344
++KRI
Sbjct: 178 YSKRI 182
>gi|335039075|ref|ZP_08532261.1| Thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
gi|334181043|gb|EGL83622.1| Thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
Length = 186
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 53/201 (26%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MF+GKTTELIRR+ ++ + D+RY T + +H+ + L AV
Sbjct: 5 ETIYGCMFAGKTTELIRRVEGKNVLAFKPKL-----DNRYSTSHIVSHNGETLKAVLIDT 59
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ H + I IDE F +++ GS VCR+
Sbjct: 60 AEEILDHVNGKAEYIAIDEVHFFDIMIGS-----VCRK---------------------- 92
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+AN G ++ A LD F+ F + L+ ++ V L A C
Sbjct: 93 ------------------LANQGYRIICAGLDLDFRGEPFPPMPYLVAISHSVTHLRAKC 134
Query: 332 MSCFRDAAFTKRI--GQEKEV 350
+ C + A T+R+ GQ V
Sbjct: 135 VCCGKPATRTQRLIDGQPAHV 155
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 21 IRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIGID 79
IRR + N + + D+RY T + +H+ + L AV +++ H + I ID
Sbjct: 20 IRRVEGKNV--LAFKPKLDNRYSTSHIVSHNGETLKAVLIDTAEEILDHVNGKAEYIAID 77
Query: 80 EGQFFPDVV-SFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
E FF ++ S +AN G ++ A LD F+ F + L+ ++ V L A C+ C
Sbjct: 78 EVHFFDIMIGSVCRKLANQGYRIICAGLDLDFRGEPFPPMPYLVAISHSVTHLRAKCVCC 137
Query: 139 FRDAAFTKRI--GQEKEV 154
+ A T+R+ GQ V
Sbjct: 138 GKPATRTQRLIDGQPAHV 155
>gi|339321279|ref|YP_004683801.1| thymidine kinase [Mycoplasma bovis Hubei-1]
gi|338227404|gb|AEI90466.1| thymidine kinase [Mycoplasma bovis Hubei-1]
Length = 190
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT EL++RI + A ++++ D R+ +++ + + + A++
Sbjct: 11 EVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSKDEIVSRTRARHKAINVAN 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + D + IDE F++
Sbjct: 71 SKEILKYWNPDYMCVAIDEVNFMD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+++ + + G V+ + LD F+R F+ + ++ A+ + KL AVC
Sbjct: 95 ---------EDILTVIDELIVKGVRVICSGLDMDFKRRPFDVMARVLASADNILKLKAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
+ C DA F+ R + E+ +
Sbjct: 146 LECKSDAGFSFRKVKSDELNL 166
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DID 74
+RI + A ++++ D R+ +++ + + + A++ +++ + D
Sbjct: 24 ELLKRINILKIAGINSLVIKPKFDTRFSKDEIVSRTRARHKAINVANSKEILKYWNPDYM 83
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+ IDE F D+++ + + G V+ + LD F+R F+ + ++ A+ + KL A
Sbjct: 84 CVAIDEVNFMDEDILTVIDELIVKGVRVICSGLDMDFKRRPFDVMARVLASADNILKLKA 143
Query: 134 VCMSCFRDAAFTKRIGQEKEV-ILG 157
VC+ C DA F+ R + E+ +LG
Sbjct: 144 VCLECKSDAGFSFRKVKSDELNLLG 168
>gi|406872829|gb|EKD23197.1| thymidine kinase, partial [uncultured bacterium]
Length = 76
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA 207
EVI GPMFSGK+ ELIRR+RR Q A + +++ D+RY E + +HD +KL A
Sbjct: 13 EVICGPMFSGKSEELIRRLRRAQIAKQNVLTCKHSLDNRYMIECIISHDGKKLEA 67
>gi|217077762|ref|YP_002335480.1| thymidine kinase [Thermosipho africanus TCF52B]
gi|419760361|ref|ZP_14286640.1| thymidine kinase [Thermosipho africanus H17ap60334]
gi|217037617|gb|ACJ76139.1| tdk thymidine kinase [Thermosipho africanus TCF52B]
gi|407514464|gb|EKF49279.1| thymidine kinase [Thermosipho africanus H17ap60334]
Length = 186
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 17/125 (13%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
VI GPM+SGKTTEL+ + Y + ++ + + D+RY + VSTH K+ A +
Sbjct: 7 VITGPMYSGKTTELLSFVEIYNIGKKKTIVFKPSIDNRYGEDIVSTHTGFKVKAHKISKS 66
Query: 214 NKLIPH-TKDIDVIGIDEGQFVE----------VIGGSDKYMAVCRECYKQKAPIKRSPF 262
+++ H + +ID + IDE QF + + G D Y A Y +K PF
Sbjct: 67 IEILNHISNNIDAVFIDEVQFFDEELINVVRNLIFKGIDVYCAGLDISYLEK------PF 120
Query: 263 KTLAN 267
KT AN
Sbjct: 121 KTTAN 125
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 24 YQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIGIDEGQ 82
Y + ++ + + D+RY + V+TH K+ A + +++ H + +ID + IDE Q
Sbjct: 27 YNIGKKKTIVFKPSIDNRYGEDIVSTHTGFKVKAHKISKSIEILNHISNNIDAVFIDEVQ 86
Query: 83 FF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRD 141
FF ++++ ++ G V A LD ++ F +L+ +A+ V K AVC C
Sbjct: 87 FFDEELINVVRNLIFKGIDVYCAGLDISYLEKPFKTTANLLAIADEVIKKKAVCEKCGEH 146
Query: 142 -AAFTKRIGQ-EKEVILG 157
A ++ +I Q +KE+ +G
Sbjct: 147 RATYSFKITQDDKEIDIG 164
>gi|406986026|gb|EKE06709.1| hypothetical protein ACD_18C00299G0001, partial [uncultured
bacterium]
Length = 173
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEK-VATHDQQKLTAVSAVELNKLIPHTK------ 71
RR+ A + +I ++ DDR+ K +++ + L+A+ +++++ H
Sbjct: 4 RRLTIQDIAQKKIVIFKHGADDRFGKPKDISSRNGHHLSAIPVKQVSEMYDHLDSALGGQ 63
Query: 72 ---DIDVIGIDEGQFFP--DVVSFAESMANAGKIVVVA-ALDGTFQRTGFNDILSLIPLA 125
++D++GIDE QFF ++V + + + I V+A LD + R F L+ LA
Sbjct: 64 GFDNLDLVGIDEIQFFDKDELVELCKKLVDEKGISVIACGLDSDYLRVPFETTAHLMALA 123
Query: 126 ECVEKLTAVCMSCF-RDAAFTKRI 148
+ V K AVCM C DA +T R+
Sbjct: 124 DSVYKSNAVCMKCRDTDAVYTHRL 147
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 78/190 (41%), Gaps = 54/190 (28%)
Query: 166 ELIRRIRRYQYANYRCMIVRYAKDDRYDTEK-VSTHDQQKLTAVSAVELNKLIPHT---- 220
ELIRR+ A + +I ++ DDR+ K +S+ + L+A+ +++++ H
Sbjct: 1 ELIRRLTIQDIAQKKIVIFKHGADDRFGKPKDISSRNGHHLSAIPVKQVSEMYDHLDSAL 60
Query: 221 -----KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
++D++GIDE QF + D+ + +C++ +K
Sbjct: 61 GGQGFDNLDLVGIDEIQFFD----KDELVELCKKLVDEK--------------------- 95
Query: 276 PPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 335
G V+ LD + R F L+ LA+ V K AVCM C
Sbjct: 96 ------------------GISVIACGLDSDYLRVPFETTAHLMALADSVYKSNAVCMKCR 137
Query: 336 -RDAAFTKRI 344
DA +T R+
Sbjct: 138 DTDAVYTHRL 147
>gi|313678840|ref|YP_004056580.1| thymidine kinase [Mycoplasma bovis PG45]
gi|392430352|ref|YP_006471397.1| thymidine kinase [Mycoplasma bovis HB0801]
gi|312950451|gb|ADR25046.1| thymidine kinase [Mycoplasma bovis PG45]
gi|392051761|gb|AFM52136.1| thymidine kinase [Mycoplasma bovis HB0801]
Length = 190
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%), Gaps = 46/201 (22%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT EL++RI + A ++++ D R+ +++ + + A++
Sbjct: 11 EVITGPMFSGKTEELLKRINILKIAGINSLVIKPKFDTRFSKDEIVSRTGARHKAINVAN 70
Query: 213 LNKLIPHTK-DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+++ + D + IDE F++
Sbjct: 71 SKEILKYWNPDYMCVAIDEVNFMD------------------------------------ 94
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+++ + + G V+ + LD F+R F+ + ++ A+ + KL AVC
Sbjct: 95 ---------EDILTVIDELIVKGVRVICSGLDMDFKRRPFDVMARVLASADNILKLKAVC 145
Query: 332 MSCFRDAAFTKRIGQEKEVRI 352
+ C DA F+ R + E+ +
Sbjct: 146 LECKSDAGFSFRKVKSDELNL 166
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DID 74
+RI + A ++++ D R+ +++ + + A++ +++ + D
Sbjct: 24 ELLKRINILKIAGINSLVIKPKFDTRFSKDEIVSRTGARHKAINVANSKEILKYWNPDYM 83
Query: 75 VIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+ IDE F D+++ + + G V+ + LD F+R F+ + ++ A+ + KL A
Sbjct: 84 CVAIDEVNFMDEDILTVIDELIVKGVRVICSGLDMDFKRRPFDVMARVLASADNILKLKA 143
Query: 134 VCMSCFRDAAFTKRIGQEKEVIL 156
VC+ C DA F+ R + E+ L
Sbjct: 144 VCLECKSDAGFSFRKVKSDELNL 166
>gi|293363771|ref|ZP_06610512.1| thymidine kinase [Mycoplasma alligatoris A21JP2]
gi|292552637|gb|EFF41406.1| thymidine kinase [Mycoplasma alligatoris A21JP2]
Length = 187
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 50/194 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
EVI GPMFSGK+ EL++RI A + +I++ A D R+ + + + ++ A++
Sbjct: 11 EVITGPMFSGKSEELLKRINILSIAKIKTLIIKPAFDTRFKATSIVSRNGSEIEAIAVKD 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ E+ K I +T + IDE F +
Sbjct: 71 SSEILKAIDNT--YKAVAIDELNFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++ + + G ++V+ LD F F + +++ L++ V KL A
Sbjct: 95 -----------EGIIQVVQELRTRGIRIIVSGLDMDFMALPFGVVPAIMALSDEVLKLKA 143
Query: 330 VCMSCFRDAAFTKR 343
VC C AAFT R
Sbjct: 144 VCFKCHSSAAFTYR 157
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKDI 73
+RI A + +I++ A D R+ + + + ++ A++ + E+ K I +T
Sbjct: 25 LLKRINILSIAKIKTLIIKPAFDTRFKATSIVSRNGSEIEAIAVKDSSEILKAIDNT--Y 82
Query: 74 DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
+ IDE FF + ++ + + G ++V+ LD F F + +++ L++ V KL
Sbjct: 83 KAVAIDELNFFDEGIIQVVQELRTRGIRIIVSGLDMDFMALPFGVVPAIMALSDEVLKLK 142
Query: 133 AVCMSCFRDAAFT-KRIGQEKEVILG 157
AVC C AAFT +++ ++ +LG
Sbjct: 143 AVCFKCHSSAAFTYRKVKSNEQNLLG 168
>gi|326430180|gb|EGD75750.1| thymidine kinase [Salpingoeca sp. ATCC 50818]
Length = 218
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 311 FNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
F IL LIPLAE V KL+AVCM C R+AAF+KRIG E E+ +
Sbjct: 56 FGPILDLIPLAESVIKLSAVCMLCHREAAFSKRIGSETEIEV 97
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 115 FNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
F IL LIPLAE V KL+AVCM C R+AAF+KRIG E E+
Sbjct: 56 FGPILDLIPLAESVIKLSAVCMLCHREAAFSKRIGSETEI 95
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/18 (83%), Positives = 18/18 (100%)
Query: 234 VEVIGGSDKYMAVCRECY 251
+EVIGG+DKY+AVCRECY
Sbjct: 95 IEVIGGADKYIAVCRECY 112
>gi|376269244|ref|YP_005121956.1| thymidine kinase [Bacillus cereus F837/76]
gi|364515044|gb|AEW58443.1| Thymidine kinase [Bacillus cereus F837/76]
Length = 114
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 73 IDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+DVI IDE QFF D+V + +AN G V+VA LD F+ F + L+ +AE V KL
Sbjct: 1 MDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKL 60
Query: 132 TAVCMSCFRDAAFTKRI 148
AVC +C A+ T+R+
Sbjct: 61 QAVCSACGSPASRTQRL 77
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 282 DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFT 341
D+V + +AN G V+VA LD F+ F + L+ +AE V KL AVC +C A+ T
Sbjct: 15 DIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCSACGSPASRT 74
Query: 342 KRI 344
+R+
Sbjct: 75 QRL 77
>gi|156741068|ref|YP_001431197.1| thymidine kinase [Roseiflexus castenholzii DSM 13941]
gi|189028751|sp|A7NI79.1|KITH_ROSCS RecName: Full=Thymidine kinase
gi|156232396|gb|ABU57179.1| Thymidine kinase [Roseiflexus castenholzii DSM 13941]
Length = 194
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 43/197 (21%)
Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
G EVI G MFSGKT ELIRR+ + A R + +D RY + +H+ + A
Sbjct: 7 GGRIEVICGCMFSGKTEELIRRLNHVRLARQRLIAFTPRRDTRYRLGSLVSHNGLSVEAR 66
Query: 209 SAVELNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
+ H DI V+ +DE ++
Sbjct: 67 VIDSIRDTPAHLNTDIHVVAVDELHLLD-------------------------------- 94
Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
PP+ V + +A+ G V+VA LD F+ F + L+ +AE V+KL
Sbjct: 95 --------DPPDAAREV--CQDLADRGLRVIVAGLDQDFRAQPFPAMAQLMAVAEQVDKL 144
Query: 328 TAVCMSCFRDAAFTKRI 344
A+C+ C A ++R+
Sbjct: 145 YAICVRCGAYATRSQRL 161
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
RR+ + A R + +D RY + +H+ + A + H DI V+
Sbjct: 27 RRLNHVRLARQRLIAFTPRRDTRYRLGSLVSHNGLSVEARVIDSIRDTPAHLNTDIHVVA 86
Query: 78 IDEGQFFPDVVSFA----ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
+DE D A + +A+ G V+VA LD F+ F + L+ +AE V+KL A
Sbjct: 87 VDELHLLDDPPDAAREVCQDLADRGLRVIVAGLDQDFRAQPFPAMAQLMAVAEQVDKLYA 146
Query: 134 VCMSCFRDAAFTKRI 148
+C+ C A ++R+
Sbjct: 147 ICVRCGAYATRSQRL 161
>gi|310831150|ref|YP_003969793.1| putative thymidine kinase [Cafeteria roenbergensis virus BV-PW1]
gi|309386334|gb|ADO67194.1| putative thymidine kinase [Cafeteria roenbergensis virus BV-PW1]
Length = 188
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 39 DDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDIDVIGIDEGQFFPDVVSFAESMAN 96
D+RY+T+++ +HD K+ +S L LI + I IDEGQFF D+ F + N
Sbjct: 35 DNRYNTKEIVSHDNIKIPCMSISNLCSLINKIDFNEFKNIIIDEGQFFEDIDKFINMIEN 94
Query: 97 AGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQE 151
+ +AAL+G F R F I +L A+ + C C ++F+ + +
Sbjct: 95 YHINIYIAALNGDFNRQPFKIISNLYARADEIFFKQGKCYFCDNKSSFSLKFNKN 149
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 16/122 (13%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+GPMFSGKT+ +I++ + + + ++ D+RY+T+++ +HD K+ +S L
Sbjct: 5 LIIGPMFSGKTSFIIKK-----FNSNNTLAIKPIIDNRYNTKEIVSHDNIKIPCMSISNL 59
Query: 214 NKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQ------KAPIKRSPFKTL 265
LI + I IDEGQF E I DK++ + + R PFK +
Sbjct: 60 CSLINKIDFNEFKNIIIDEGQFFEDI---DKFINMIENYHINIYIAALNGDFNRQPFKII 116
Query: 266 AN 267
+N
Sbjct: 117 SN 118
>gi|402552325|ref|YP_006601042.1| thymidine kinase [Mycoplasma genitalium M2288]
gi|401801020|gb|AFQ04334.1| thymidine kinase [Mycoplasma genitalium M2288]
Length = 213
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 48/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT +L+ +I+R++ A +I + D R T V + + + A++
Sbjct: 16 EVICGPMFSGKTEKLLHKIKRWKIAKISVVIFKPIIDTR-QTNIVKSRNGEYDQAITINS 74
Query: 213 LNKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
++ H K+ ++ IDE QF +NE
Sbjct: 75 PFEIYDHLVDKNYQIVAIDEAQF-------------------------------FSNE-- 101
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
++ ++ GK V+++ LD F+ F I L+ +A+ V KL A+
Sbjct: 102 ------------IIEVVTTLNEIGKNVIISGLDTDFRAEPFGCIPQLLAIADVVNKLDAI 149
Query: 331 CMSCFRDAAFTKRI 344
C C A T+R+
Sbjct: 150 CNVCGSLAQRTQRL 163
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDID 74
+I+R++ A +I + D R T V + + + A++ ++ H K+
Sbjct: 30 LLHKIKRWKIAKISVVIFKPIIDTR-QTNIVKSRNGEYDQAITINSPFEIYDHLVDKNYQ 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
++ IDE QFF + ++ ++ GK V+++ LD F+ F I L+ +A+ V KL A
Sbjct: 89 IVAIDEAQFFSNEIIEVVTTLNEIGKNVIISGLDTDFRAEPFGCIPQLLAIADVVNKLDA 148
Query: 134 VCMSCFRDAAFTKRI 148
+C C A T+R+
Sbjct: 149 ICNVCGSLAQRTQRL 163
>gi|228983017|ref|ZP_04143276.1| Thymidine kinase [Bacillus thuringiensis Bt407]
gi|410678024|ref|YP_006930395.1| thymidine kinase Tdk [Bacillus thuringiensis Bt407]
gi|228777200|gb|EEM25508.1| Thymidine kinase [Bacillus thuringiensis Bt407]
gi|409177154|gb|AFV21458.1| thymidine kinase Tdk [Bacillus thuringiensis Bt407]
Length = 216
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 15/142 (10%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQ----------QKLTAVSAVELNKLIP 68
R + R+QYA R + + D+R+ + D+ ++LT E+ L
Sbjct: 26 REVTRHQYAKKRIIGFKPMIDNRFSENTITDRDRMFELPCHNLPRQLTEKETREICNL-- 83
Query: 69 HTKDIDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 127
+ +++ DE QFF + +V+ A ++ GKIV ++ LD +++ F L+ +A
Sbjct: 84 -SSSYEIVIFDEVQFFSEEIVTIALTLRLQGKIVYMSGLDMSYEGKPFGFTPQLMAVANV 142
Query: 128 VEKLTAVCMSCFR-DAAFTKRI 148
V KL+AVC+SC DA T+R+
Sbjct: 143 VHKLSAVCLSCGSYDAIHTQRL 164
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 59/202 (29%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQ----------Q 203
+I+GPMF+GKT L R + R+QYA R + + D+R+ ++ D+ +
Sbjct: 11 LIVGPMFAGKTQFLGREVTRHQYAKKRIIGFKPMIDNRFSENTITDRDRMFELPCHNLPR 70
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
+LT E+ L + +++ DE QF
Sbjct: 71 QLTEKETREICNL---SSSYEIVIFDEVQFFS---------------------------- 99
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
++V+ A ++ GKIV ++ LD +++ F L+ +A
Sbjct: 100 -----------------EEIVTIALTLRLQGKIVYMSGLDMSYEGKPFGFTPQLMAVANV 142
Query: 324 VEKLTAVCMSCFR-DAAFTKRI 344
V KL+AVC+SC DA T+R+
Sbjct: 143 VHKLSAVCLSCGSYDAIHTQRL 164
>gi|338730235|ref|YP_004659627.1| Thymidine kinase [Thermotoga thermarum DSM 5069]
gi|335364586|gb|AEH50531.1| Thymidine kinase [Thermotoga thermarum DSM 5069]
Length = 186
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 50/203 (24%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+GPM+SGKTTEL+ + Y+ + + + A DDRY V TH ++ A+ AVE
Sbjct: 7 MIVGPMYSGKTTELLSFVEIYKLGRKKFKVFKPAIDDRYGKSLVKTHTGLEVEAI-AVEG 65
Query: 214 NKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+K I + + ID + IDE QF +
Sbjct: 66 SKDIVNLLEEKIDAVFIDEVQFFD------------------------------------ 89
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
D+V + + ++ V A LD TF++ F +L+ +A+ V K AVC
Sbjct: 90 ---------KDLVRIVKQLIDSNVDVFCAGLDMTFKQNPFETTAALMAIADEVIKKKAVC 140
Query: 332 MSC--FRDAAFTKRIGQEKEVRI 352
C ++ K +EKE+ I
Sbjct: 141 EVCGEYKANLTYKVTEEEKEIDI 163
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 24 YQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDIDVIGIDEG 81
Y+ + + + A DDRY V TH ++ A+ AVE +K I + + ID + IDE
Sbjct: 27 YKLGRKKFKVFKPAIDDRYGKSLVKTHTGLEVEAI-AVEGSKDIVNLLEEKIDAVFIDEV 85
Query: 82 QFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC-- 138
QFF D+V + + ++ V A LD TF++ F +L+ +A+ V K AVC C
Sbjct: 86 QFFDKDLVRIVKQLIDSNVDVFCAGLDMTFKQNPFETTAALMAIADEVIKKKAVCEVCGE 145
Query: 139 FRDAAFTKRIGQEKEVILG 157
++ K +EKE+ +G
Sbjct: 146 YKANLTYKVTEEEKEIDIG 164
>gi|294155796|ref|YP_003560180.1| thymidine kinase [Mycoplasma crocodyli MP145]
gi|291600409|gb|ADE19905.1| thymidine kinase [Mycoplasma crocodyli MP145]
Length = 187
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 50/203 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS--- 209
EVI GPMFSGK+ EL++RI A + +I++ A D R+ + + + +++ A+S
Sbjct: 11 EVITGPMFSGKSEELLKRINILSIAQIKTLIIKPAFDTRFKETSIVSRNGKEIKAISVND 70
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
+ E+ LI ++ + IDE F +
Sbjct: 71 SSEILSLIDNS--YKAVAIDELNFFD---------------------------------- 94
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
+V + + G ++V+ LD F F + ++ L++ + KL A
Sbjct: 95 -----------EGIVEVIQELRTRGIRIIVSGLDMDFMARPFGVVPIIMALSDEILKLKA 143
Query: 330 VCMSCFRDAAFTKRIGQEKEVRI 352
VC C A+FT R + E+ +
Sbjct: 144 VCFKCHSSASFTYRKIKSNELNV 166
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVS---AVELNKLIPHTKD 72
+RI A + +I++ A D R+ + + + +++ A+S + E+ LI ++
Sbjct: 24 ELLKRINILSIAQIKTLIIKPAFDTRFKETSIVSRNGKEIKAISVNDSSEILSLIDNS-- 81
Query: 73 IDVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
+ IDE FF + +V + + G ++V+ LD F F + ++ L++ + KL
Sbjct: 82 YKAVAIDELNFFDEGIVEVIQELRTRGIRIIVSGLDMDFMARPFGVVPIIMALSDEILKL 141
Query: 132 TAVCMSCFRDAAFTKRIGQEKEV-ILG 157
AVC C A+FT R + E+ +LG
Sbjct: 142 KAVCFKCHSSASFTYRKIKSNELNVLG 168
>gi|392403740|ref|YP_006440352.1| thymidine kinase [Turneriella parva DSM 21527]
gi|390611694|gb|AFM12846.1| thymidine kinase [Turneriella parva DSM 21527]
Length = 249
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTH--DQQKLTAVSAV 211
VI GPMFSGKT EL+RR+RR + A + + + A D+RY +V H Q +V
Sbjct: 18 VIHGPMFSGKTEELLRRVRRAKIARKKVQLFKPAIDNRYHATQVLPHFLAQAADESVQVG 77
Query: 212 ELNKLIPHTKDI--------DVIGIDEGQFVE 235
E ++ H ++I D+ I+E QF++
Sbjct: 78 EAAHVVSHPREIAALLKNDTDIAAIEEAQFLD 109
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATH--DQQKLTAVSAVELNKLIPHTKDI- 73
RR+RR + A + + + A D+RY +V H Q +V E ++ H ++I
Sbjct: 31 LLRRVRRAKIARKKVQLFKPAIDNRYHATQVLPHFLAQAADESVQVGEAAHVVSHPREIA 90
Query: 74 -------DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQR------------T 113
D+ I+E QF D ++ + G V+++ LD ++R +
Sbjct: 91 ALLKNDTDIAAIEEAQFLDDSLIDLVRRFSRQGIDVILSLLDQDYRRLPFPIAPAPGSES 150
Query: 114 GFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
G ++ + +A KL A+C+ C +DA ++++
Sbjct: 151 GSRNVGEYLAIAHESLKLAAICVVCGQDAHHSQKL 185
>gi|51704742|gb|AAU09405.1| putative thymidine kinase [Bacillus megaterium]
Length = 70
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS 209
EVI G MFSGK+ ELIRR+RR Q+A + + + A D+RY E V +H+ + A S
Sbjct: 12 EVICGSMFSGKSEELIRRVRRTQFAKQKAQVFKPAIDNRYSEEAVVSHNGTSVMAYS 68
>gi|150021091|ref|YP_001306445.1| thymidine kinase [Thermosipho melanesiensis BI429]
gi|149793612|gb|ABR31060.1| Thymidine kinase [Thermosipho melanesiensis BI429]
Length = 187
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
VI GPM+SGKTTEL+ + Y + ++ + + D+RY + VSTH K++A+ +
Sbjct: 7 VITGPMYSGKTTELLSFVEIYNIGRKKTIVFKPSIDNRYGEDIVSTHTGFKVSAIRISKS 66
Query: 214 NKLIPHTKD-IDVIGIDEGQFVEV 236
+++ + +D ID + +DE QF ++
Sbjct: 67 REILDYIRDSIDAVFVDEIQFFDL 90
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 24 YQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIGIDEGQ 82
Y + ++ + + D+RY + V+TH K++A+ + +++ + +D ID + +DE Q
Sbjct: 27 YNIGRKKTIVFKPSIDNRYGEDIVSTHTGFKVSAIRISKSREILDYIRDSIDAVFVDEIQ 86
Query: 83 FFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
FF ++V + + G V A LD ++ F L+ +A+ V K AVC C
Sbjct: 87 FFDLELVDVVKELVFKGIDVYCAGLDISYLENPFETTAKLLAMADEVIKKKAVCEKC 143
>gi|402551326|ref|YP_006600045.1| thymidine kinase [Mycoplasma genitalium M6282]
gi|401800021|gb|AFQ03337.1| thymidine kinase [Mycoplasma genitalium M6282]
Length = 213
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 48/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT +L+ +I+R++ A +I + D R T V + + + A++
Sbjct: 16 EVICGPMFSGKTEKLLHKIKRWKIAKISVVIFKPIIDTR-QTNIVKSRNGEYDQAITINS 74
Query: 213 LNKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
++ H K+ ++ IDE QF +NE
Sbjct: 75 PFEIYDHLVDKNYQIVAIDEAQF-------------------------------FSNE-- 101
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
++ ++ G V+++ LD F+ F I L+ +A+ V KL A+
Sbjct: 102 ------------IIEVVTTLNEIGTNVIISGLDTDFRAEPFGCIPQLLAIADVVNKLDAI 149
Query: 331 CMSCFRDAAFTKRI 344
C C A T+R+
Sbjct: 150 CNVCGSLAQRTQRL 163
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDID 74
+I+R++ A +I + D R T V + + + A++ ++ H K+
Sbjct: 30 LLHKIKRWKIAKISVVIFKPIIDTR-QTNIVKSRNGEYDQAITINSPFEIYDHLVDKNYQ 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
++ IDE QFF + ++ ++ G V+++ LD F+ F I L+ +A+ V KL A
Sbjct: 89 IVAIDEAQFFSNEIIEVVTTLNEIGTNVIISGLDTDFRAEPFGCIPQLLAIADVVNKLDA 148
Query: 134 VCMSCFRDAAFTKRI 148
+C C A T+R+
Sbjct: 149 ICNVCGSLAQRTQRL 163
>gi|51894174|ref|YP_076865.1| thymidine kinase [Symbiobacterium thermophilum IAM 14863]
gi|51857863|dbj|BAD42021.1| Thymidine kinase [Symbiobacterium thermophilum IAM 14863]
Length = 195
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 48/181 (26%)
Query: 157 GPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY-DTEKVSTHDQQKLTAVSAVELNK 215
G M++GKTTELIRR+R + A ++ + RY D E + THD + AV +
Sbjct: 16 GSMYAGKTTELIRRVRTFILAKRTAVVFQPRMAKRYTDDEVIVTHDGLRFEAVHTDSPLE 75
Query: 216 LIPHTK--DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALN 273
++ + + DVIGIDE QF +V
Sbjct: 76 ILWYAEIHKPDVIGIDEAQFYDV------------------------------------- 98
Query: 274 VPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMS 333
+V + +AN G V+ A L T + F + L+ LA+ + + VC+
Sbjct: 99 --------SLVDTVQELANRGHYVIAAGLSQTSEGRPFGCMPQLLALADSITSVYGVCVV 150
Query: 334 C 334
C
Sbjct: 151 C 151
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRY-DTEKVATHDQQKLTAVSAVELNKLIPHTK--DIDV 75
RR+R + A ++ + RY D E + THD + AV +++ + + DV
Sbjct: 28 RRVRTFILAKRTAVVFQPRMAKRYTDDEVIVTHDGLRFEAVHTDSPLEILWYAEIHKPDV 87
Query: 76 IGIDEGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
IGIDE QF+ +V + +AN G V+ A L T + F + L+ LA+ + + V
Sbjct: 88 IGIDEAQFYDVSLVDTVQELANRGHYVIAAGLSQTSEGRPFGCMPQLLALADSITSVYGV 147
Query: 135 CMSC 138
C+ C
Sbjct: 148 CVVC 151
>gi|12044884|ref|NP_072694.1| thymidine kinase [Mycoplasma genitalium G37]
gi|255660162|ref|ZP_05405571.1| thymidine kinase [Mycoplasma genitalium G37]
gi|402550830|ref|YP_006599550.1| thymidine kinase [Mycoplasma genitalium M2321]
gi|402551816|ref|YP_006600534.1| thymidine kinase [Mycoplasma genitalium M6320]
gi|1346381|sp|P47280.1|KITH_MYCGE RecName: Full=Thymidine kinase
gi|3844644|gb|AAC71250.1| thymidine kinase [Mycoplasma genitalium G37]
gi|166078843|gb|ABY79461.1| thymidine kinase [synthetic Mycoplasma genitalium JCVI-1.0]
gi|401799525|gb|AFQ02842.1| thymidine kinase [Mycoplasma genitalium M2321]
gi|401800511|gb|AFQ03826.1| thymidine kinase [Mycoplasma genitalium M6320]
Length = 213
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 48/194 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT +L+ +I+R++ A +I + D R T V + + + A++
Sbjct: 16 EVICGPMFSGKTEKLLHKIKRWKIAKISVVIFKPIIDTR-QTNIVKSRNGEYDQAITINS 74
Query: 213 LNKLIPHT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
++ H K+ ++ IDE QF +NE
Sbjct: 75 PFEIYDHLVDKNYQIVAIDEAQF-------------------------------FSNE-- 101
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
++ ++ G V+++ LD F+ F I L+ +A+ V KL A+
Sbjct: 102 ------------IIEVVTTLNEIGTNVIISGLDTDFRAEPFGCIPQLLAIADVVNKLDAI 149
Query: 331 CMSCFRDAAFTKRI 344
C C A T+R+
Sbjct: 150 CNVCGSLAQRTQRL 163
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 17 FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDID 74
+I+R++ A +I + D R T V + + + A++ ++ H K+
Sbjct: 30 LLHKIKRWKIAKISVVIFKPIIDTR-QTNIVKSRNGEYDQAITINSPFEIYDHLVDKNYQ 88
Query: 75 VIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
++ IDE QFF + ++ ++ G V+++ LD F+ F I L+ +A+ V KL A
Sbjct: 89 IVAIDEAQFFSNEIIEVVTTLNEIGTNVIISGLDTDFRAEPFGCIPQLLAIADVVNKLDA 148
Query: 134 VCMSCFRDAAFTKRI 148
+C C A T+R+
Sbjct: 149 ICNVCGSLAQRTQRL 163
>gi|148657903|ref|YP_001278108.1| thymidine kinase [Roseiflexus sp. RS-1]
gi|189028752|sp|A5UZV5.1|KITH_ROSS1 RecName: Full=Thymidine kinase
gi|148570013|gb|ABQ92158.1| Thymidine kinase [Roseiflexus sp. RS-1]
Length = 193
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 82/201 (40%), Gaps = 41/201 (20%)
Query: 144 FTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQ 203
T+ +G EVI G MFSGKT ELIRR+ + A R + +D RY + +H+
Sbjct: 1 MTRLLGGRIEVICGCMFSGKTEELIRRLNHVRLARQRLIAFTPRRDTRYRLGSLVSHNGL 60
Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
+ A ++I +DI A +
Sbjct: 61 SVEA-------RVIDSIRDI------------------------------PAYLDSDVDV 83
Query: 264 TLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
+E L+ PP + +A+ G V+VA LD F+ F + L+ +AE
Sbjct: 84 VAVDELHLLDDPPDA----AREVCQQLADRGLRVIVAGLDQDFRAQPFPAMAQLMAVAEQ 139
Query: 324 VEKLTAVCMSCFRDAAFTKRI 344
V+KL A+C+ C A ++R+
Sbjct: 140 VDKLYAICVRCGAYATRSQRL 160
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 92 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
+ +A+ G V+VA LD F+ F + L+ +AE V+KL A+C+ C A ++R+
Sbjct: 104 QQLADRGLRVIVAGLDQDFRAQPFPAMAQLMAVAEQVDKLYAICVRCGAYATRSQRL 160
>gi|76664733|emb|CAJ17806.1| thymidine kinase [Candidatus Phytoplasma solani]
Length = 154
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 17/120 (14%)
Query: 39 DDRYDT-EKVATHDQQKLTAVSAVELNKLIPHTKDI--------DVIGIDEGQFFP-DVV 88
D+RY + E+V +H++ + A+ LI ++DI D+I IDE F D+V
Sbjct: 17 DNRYSSKEEVVSHNRNTIPAI-------LIDKSRDILAFVTDKTDLIIIDEAHFLDHDIV 69
Query: 89 SFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRI 148
+ + +AN +++ LD F+R F + L+ LA+ V KLTA+C + A T+R+
Sbjct: 70 AIVDYLANRNIQAILSGLDLVFKRKPFGPMPYLLVLADIVTKLTAICAVSGKPATKTQRL 129
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 282 DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFT 341
D+V+ + +AN +++ LD F+R F + L+ LA+ V KLTA+C + A T
Sbjct: 67 DIVAIVDYLANRNIQAILSGLDLVFKRKPFGPMPYLLVLADIVTKLTAICAVSGKPATKT 126
Query: 342 KRIGQEKEVR 351
+R+ K +
Sbjct: 127 QRLINGKPAK 136
>gi|339629103|ref|YP_004720746.1| thymidine kinase [Sulfobacillus acidophilus TPY]
gi|379006764|ref|YP_005256215.1| thymidine kinase [Sulfobacillus acidophilus DSM 10332]
gi|339286892|gb|AEJ41003.1| thymidine kinase [Sulfobacillus acidophilus TPY]
gi|361053026|gb|AEW04543.1| Thymidine kinase [Sulfobacillus acidophilus DSM 10332]
Length = 191
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 50 HDQQKLTAVSAVELNKLIPHT-KDIDVIGIDEGQFF-PDVVSFAESMANAGKIVVVAALD 107
H KLT V + L+ H D DV+ IDE QFF P +VS + + G ++ VA LD
Sbjct: 58 HPNLKLTPVPQADAEWLLRHVVPDADVVAIDEAQFFTPAIVSVLQQLRMRGLVIYVAGLD 117
Query: 108 GTFQRTGFNDILSLIPLAECVEKLTAVCMSC-FRDAAFTKR-IGQEKEVILG 157
++ F + ++ +A + KL A C C +A F++R + ++++G
Sbjct: 118 QDYRGNPFGPMGQILCIANQIHKLHARCARCGASEALFSQRVVALSDQIVIG 169
>gi|149018923|gb|EDL77564.1| rCG25068 [Rattus norvegicus]
Length = 114
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 282 DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFT 341
D++ F E+M N KI+VV L TFQ F L L+ C+ + ++C+ CF +AA+T
Sbjct: 5 DIMGFCEAMTNDSKIMVVDTLKETFQSNVFCSTLKLVLAKSCL-TMASMCLECFPEAAYT 63
Query: 342 KRIGQEKEVRI 352
K +G K+V +
Sbjct: 64 KWLGLRKKVGV 74
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 86 DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFT 145
D++ F E+M N KI+VV L TFQ F L L+ C+ + ++C+ CF +AA+T
Sbjct: 5 DIMGFCEAMTNDSKIMVVDTLKETFQSNVFCSTLKLVLAKSCL-TMASMCLECFPEAAYT 63
Query: 146 KRIGQEKEV 154
K +G K+V
Sbjct: 64 KWLGLRKKV 72
>gi|215275159|sp|P0C8I5.1|KITH_ASFP4 RecName: Full=Thymidine kinase; Short=TDK
Length = 188
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 32 MIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHTKDIDVIGIDEGQFFPDVVS 89
+ ++ K+ R T K + Q + +E +L + DI + IDE FF D++
Sbjct: 42 VFIKSTKNTRDKTIKTHSGIQLRPKQCKIIESTQLSDVGSLTDIHAVVIDEAHFFDDLIK 101
Query: 90 FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFR-DAAFTKRI 148
+ A+ KI+++A L+ +F++ F I+ + P V+ + CM C R +A F R
Sbjct: 102 -CRTWADEEKIIILAGLNASFEQKMFPSIVRIFPYCSWVKYIGRTCMKCNRHNACFNVRK 160
Query: 149 GQEKEVILG 157
+K +IL
Sbjct: 161 NADKTLILA 169
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 50/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++LGPMF+GKTT LI I + + + ++ K+ R T K + Q + +E
Sbjct: 13 SLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRDKTIKTHSGIQLRPKQCKIIE 72
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L + DI + IDE F
Sbjct: 73 STQLSDVGSLTDIHAVVIDEAHF------------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D++ + A+ KI+++A L+ +F++ F I+ + P V+ +
Sbjct: 96 ---------FDDLIK-CRTWADEEKIIILAGLNASFEQKMFPSIVRIFPYCSWVKYIGRT 145
Query: 331 CMSCFR-DAAFTKRIGQEKEV 350
CM C R +A F R +K +
Sbjct: 146 CMKCNRHNACFNVRKNADKTL 166
>gi|343491984|ref|ZP_08730363.1| thymidine kinase [Mycoplasma columbinum SF7]
gi|343128438|gb|EGV00240.1| thymidine kinase [Mycoplasma columbinum SF7]
Length = 198
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 50/194 (25%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA---VS 209
EVI GPMFSGKT EL++RI+ + A+ + ++V+ D R+ K+ + K+ A
Sbjct: 12 EVITGPMFSGKTEELLKRIKILEIADIKTLVVKPQFDTRFSENKLVSRTGGKIKAHNISK 71
Query: 210 AVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
A ++ L HT + IDE F++
Sbjct: 72 AKDILTLWNHT--YKAVAIDEVNFLD---------------------------------- 95
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
++ + + G V+ + LD F R F + ++ +A+ V KL A
Sbjct: 96 -----------KGLLKVIDKLVLNGVRVICSGLDMDFLRRPFGIMPQILSIADEVVKLKA 144
Query: 330 VCMSCFRDAAFTKR 343
VC+ C A F+ R
Sbjct: 145 VCVKCKTSAGFSFR 158
>gi|215275160|sp|P0C8I6.1|KITH_ASFWA RecName: Full=Thymidine kinase; Short=TDK
gi|33324272|gb|AAQ07945.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 21 IRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHTKDIDVIGI 78
I ++ + + ++ K+ R T K + Q + +E +L + DI + I
Sbjct: 31 IYMLEHLEKKVVFIKSTKNTRDKTIKTHSGIQLRPKHCKIIESTQLSDVGSLTDIHAVVI 90
Query: 79 DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
DE FF D++ + A+ KI+++A L+ +F++ F I+ + P V+ + CM C
Sbjct: 91 DEAHFFDDLIK-CRTWADEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRTCMKC 149
Query: 139 FR-DAAFTKRIGQEKEVILG 157
R +A F R +K +IL
Sbjct: 150 NRHNACFNVRKNADKTLILA 169
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 50/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++LGPMF+GKTT LI I ++ + + ++ K+ R T K + Q + +E
Sbjct: 13 SLVLGPMFAGKTTFLIHCIYMLEHLEKKVVFIKSTKNTRDKTIKTHSGIQLRPKHCKIIE 72
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L + DI + IDE F
Sbjct: 73 STQLSDVGSLTDIHAVVIDEAHF------------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D++ + A+ KI+++A L+ +F++ F I+ + P V+ +
Sbjct: 96 ---------FDDLIK-CRTWADEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRT 145
Query: 331 CMSCFR-DAAFTKRIGQEKEV 350
CM C R +A F R +K +
Sbjct: 146 CMKCNRHNACFNVRKNADKTL 166
>gi|311068883|ref|YP_003973806.1| thymidine kinase [Bacillus atrophaeus 1942]
gi|419820476|ref|ZP_14344086.1| thymidine kinase [Bacillus atrophaeus C89]
gi|310869400|gb|ADP32875.1| thymidine kinase [Bacillus atrophaeus 1942]
gi|388475292|gb|EIM12005.1| thymidine kinase [Bacillus atrophaeus C89]
Length = 191
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 32 MIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH----TKDIDVIGIDEGQFFPD- 86
+ ++ D RY +++ THD + + A+ ++ H DV+ DE QFF D
Sbjct: 34 LFIKPTLDSRYSDDEIVTHDGESVRAMVIDHDTQMGMHDFFTIMGADVVLFDEAQFFTDD 93
Query: 87 VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFT- 145
+V + GK V VA L+ ++ F + LI +A+ V LTA+C C + A
Sbjct: 94 LVEMVSDLVGEGKTVYVAGLNTDYKLKPFETTVKLIGIADEVNVLTAICADCAKQGATVT 153
Query: 146 -KRIGQEKEVILG 157
K G + + LG
Sbjct: 154 IKTSGSDDRIELG 166
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 68/190 (35%), Gaps = 49/190 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
V G MF+GK+T L+ ++ + ++ D RY +++ THD + + A+
Sbjct: 6 VFTGSMFAGKSTALVEAGKKESKEGKTVLFIKPTLDSRYSDDEIVTHDGESVRAMVIDHD 65
Query: 214 NKLIPH----TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANEN 269
++ H DV+ DE QF
Sbjct: 66 TQMGMHDFFTIMGADVVLFDEAQFFT---------------------------------- 91
Query: 270 AALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 329
D+V + GK V VA L+ ++ F + LI +A+ V LTA
Sbjct: 92 -----------DDLVEMVSDLVGEGKTVYVAGLNTDYKLKPFETTVKLIGIADEVNVLTA 140
Query: 330 VCMSCFRDAA 339
+C C + A
Sbjct: 141 ICADCAKQGA 150
>gi|33324266|gb|AAQ07942.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 13 YIVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHT 70
+++H + R + + + ++ K+ R T K + Q + +E +L +
Sbjct: 26 FLIHCIYMLERLEK---KVVFIKSTKNTRDKTIKTHSGIQLRSKQCKIIESTQLSDVGSL 82
Query: 71 KDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
DI + IDE FF D++ + A+ KI+++A L+ +F++ F I+ + P V+
Sbjct: 83 TDIHAVVIDEAHFFDDLIK-CRTWADEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKY 141
Query: 131 LTAVCMSCFR-DAAFTKRIGQEKEVILG 157
+ CM C R +A F R +K +IL
Sbjct: 142 IGRTCMKCNRHNACFNVRKNADKTLILA 169
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 50/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++LGPMF+GKTT LI I + + + ++ K+ R T K + Q + +E
Sbjct: 13 SLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRDKTIKTHSGIQLRSKQCKIIE 72
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L + DI + IDE F
Sbjct: 73 STQLSDVGSLTDIHAVVIDEAHF------------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D++ + A+ KI+++A L+ +F++ F I+ + P V+ +
Sbjct: 96 ---------FDDLIK-CRTWADEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRT 145
Query: 331 CMSCFR-DAAFTKRIGQEKEV 350
CM C R +A F R +K +
Sbjct: 146 CMKCNRHNACFNVRKNADKTL 166
>gi|315499297|ref|YP_004088101.1| thymidine kinase [Asticcacaulis excentricus CB 48]
gi|315417309|gb|ADU13950.1| Thymidine kinase [Asticcacaulis excentricus CB 48]
Length = 200
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 44/201 (21%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYR-CMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
VI GPMF+GKTTEL++RI + + ++++ A D RY +V THD AV
Sbjct: 7 VICGPMFAGKTTELLKRILWARNGERKDVLVLKTAFDVRYSRTEVITHDGLAAEAVVLHA 66
Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + ++ D++ DE QF F+ +
Sbjct: 67 FSDVEARLQEADLVCFDEVQF----------------------------FQNMDR----- 93
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
DVV + +G VV A LD ++ F L+ +A+ V KL A C
Sbjct: 94 ---------DVVELIRDLLASGTDVVAAGLDTNWKGEAFAATGLLMAMADEVVKLKAHCA 144
Query: 333 SCFRDAAFT-KRIGQEKEVRI 352
C + A T K++ E+++
Sbjct: 145 VCGQPAHKTFKKVEDNVEIQL 165
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 32 MIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGIDEGQFFP----DV 87
++++ A D RY +V THD AV + + ++ D++ DE QFF DV
Sbjct: 36 LVLKTAFDVRYSRTEVITHDGLAAEAVVLHAFSDVEARLQEADLVCFDEVQFFQNMDRDV 95
Query: 88 VSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFT-K 146
V + +G VV A LD ++ F L+ +A+ V KL A C C + A T K
Sbjct: 96 VELIRDLLASGTDVVAAGLDTNWKGEAFAATGLLMAMADEVVKLKAHCAVCGQPAHKTFK 155
Query: 147 RIGQEKEVILG 157
++ E+ LG
Sbjct: 156 KVEDNVEIQLG 166
>gi|215275158|sp|P0C8I4.1|KITH_ASFM2 RecName: Full=Thymidine kinase; Short=TDK
gi|33324240|gb|AAQ07929.1| truncated thymidine kinase [African swine fever virus]
Length = 188
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 13 YIVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHT 70
+++H + R + + + ++ K+ R T K + Q + +E +L +
Sbjct: 26 FLIHCIYMLERLEK---KVVFIKSTKNTRDKTIKTHSGIQLQSKQCEIIESTQLSDVGSL 82
Query: 71 KDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
DI + IDE FF D++ + A+ KI+++A L+ +F++ F I+ + P ++
Sbjct: 83 TDIHAVVIDEAHFFDDLIK-CRAWADEEKIIILAGLNASFEQKMFQPIVHIFPYCSWIKY 141
Query: 131 LTAVCMSCFR-DAAFTKRIGQEKEVILG 157
+ CM C R +A F R +K +IL
Sbjct: 142 IGRTCMKCNRHNACFNVRKNADKTLILA 169
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 50/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++LGPMF+GKTT LI I + + + ++ K+ R T K + Q + +E
Sbjct: 13 SLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRDKTIKTHSGIQLQSKQCEIIE 72
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L + DI + IDE F
Sbjct: 73 STQLSDVGSLTDIHAVVIDEAHF------------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D++ + A+ KI+++A L+ +F++ F I+ + P ++ +
Sbjct: 96 ---------FDDLIK-CRAWADEEKIIILAGLNASFEQKMFQPIVHIFPYCSWIKYIGRT 145
Query: 331 CMSCFR-DAAFTKRIGQEKEV 350
CM C R +A F R +K +
Sbjct: 146 CMKCNRHNACFNVRKNADKTL 166
>gi|33324270|gb|AAQ07944.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 34 VRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHTKDIDVIGIDEGQFFPDVVSFA 91
++ K+ R T K + Q + +E +L + DI + IDE FF D++
Sbjct: 44 IKSTKNTRDKTIKTHSGIQLRPKQCKIIESTQLSDVGSLTDIHAVVIDEAHFFDDLIK-C 102
Query: 92 ESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFR-DAAFTKRIGQ 150
+ A+ KI+++A L+ +F++ F I+ + P V+ + CM C R +A F R
Sbjct: 103 RTWADEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRTCMKCNRHNACFNVRKNA 162
Query: 151 EKEVILG 157
+K +IL
Sbjct: 163 DKALILA 169
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 77/201 (38%), Gaps = 50/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++LGPMF+GKTT LI I + + ++ K+ R T K + Q + +E
Sbjct: 13 SLVLGPMFAGKTTFLIHCIYMLERLEKKVAFIKSTKNTRDKTIKTHSGIQLRPKQCKIIE 72
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L + DI + IDE F
Sbjct: 73 STQLSDVGSLTDIHAVVIDEAHF------------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D++ + A+ KI+++A L+ +F++ F I+ + P V+ +
Sbjct: 96 ---------FDDLIK-CRTWADEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRT 145
Query: 331 CMSCFR-DAAFTKRIGQEKEV 350
CM C R +A F R +K +
Sbjct: 146 CMKCNRHNACFNVRKNADKAL 166
>gi|145342503|ref|XP_001416221.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576446|gb|ABO94514.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 196
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 82 QFFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFR 140
QF D+ FA A G+ V V LDG ++R F +L LIPL + V +L C C
Sbjct: 92 QFMGDLAPFARRCAEELGQTVYVCGLDGDYRRERFGGVLDLIPLCDTVTRLRGTCAECGD 151
Query: 141 DAAFTKRIGQEKEVI 155
++ F++R+ ++V+
Sbjct: 152 ESLFSRRVEASEDVV 166
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 282 DVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAF 340
D+ FA A G+ V V LDG ++R F +L LIPL + V +L C C ++ F
Sbjct: 96 DLAPFARRCAEELGQTVYVCGLDGDYRRERFGGVLDLIPLCDTVTRLRGTCAECGDESLF 155
Query: 341 TKRIGQEKEV 350
++R+ ++V
Sbjct: 156 SRRVEASEDV 165
>gi|239617833|ref|YP_002941155.1| thymidine kinase [Kosmotoga olearia TBF 19.5.1]
gi|239506664|gb|ACR80151.1| Thymidine kinase [Kosmotoga olearia TBF 19.5.1]
Length = 188
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+GPM+SGKT+EL+ + Y + ++ + D RY + V +H QK+ A++
Sbjct: 7 LIVGPMYSGKTSELLSLVEIYSLGKKKYLVFKPEIDTRYSVDHVVSHTGQKVPAITIPSA 66
Query: 214 NKLIPHTKDI----DVIGIDEGQF 233
+KL+ DI D I IDE F
Sbjct: 67 SKLLEKFDDINEKLDAIFIDEVHF 90
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 21 IRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI----DVI 76
+ Y + ++ + D RY + V +H QK+ A++ +KL+ DI D I
Sbjct: 24 VEIYSLGKKKYLVFKPEIDTRYSVDHVVSHTGQKVPAITIPSASKLLEKFDDINEKLDAI 83
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IDE FF D++ + + G V LD +++ F SL+ +A+ V K AVC
Sbjct: 84 FIDEVHFFDIDIIDVIKKIILKGVDVFCVGLDMSYKHRPFQTTASLMAIADEVIKKKAVC 143
Query: 136 MSC 138
C
Sbjct: 144 HVC 146
>gi|212696566|ref|ZP_03304694.1| hypothetical protein ANHYDRO_01104 [Anaerococcus hydrogenalis DSM
7454]
gi|212676422|gb|EEB36029.1| hypothetical protein ANHYDRO_01104 [Anaerococcus hydrogenalis DSM
7454]
Length = 117
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 74 DVIGIDEGQFFPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVE 129
D IGIDE QFFPD +V++ + N+ +VV+ LD ++ F + L+P+A+ +
Sbjct: 1 DAIGIDEVQFFPDDPSEIVNYFIKLMNSHITIVVSGLDMDYKARPFEIVKELMPIADELI 60
Query: 130 KLTAVCMSCFRDAAFTKR 147
K A+C SC DA + R
Sbjct: 61 KHHAICASCGEDAWVSFR 78
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 280 FPD----VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCF 335
FPD +V++ + N+ +VV+ LD ++ F + L+P+A+ + K A+C SC
Sbjct: 11 FPDDPSEIVNYFIKLMNSHITIVVSGLDMDYKARPFEIVKELMPIADELIKHHAICASCG 70
Query: 336 RDAAFTKR 343
DA + R
Sbjct: 71 EDAWVSFR 78
>gi|209965237|ref|YP_002298152.1| thymidine kinase [Rhodospirillum centenum SW]
gi|209958703|gb|ACI99339.1| thymidine kinase [Rhodospirillum centenum SW]
Length = 194
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 47/203 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYA-NYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAV 211
EVI GPMFSGK+TE+++R Y + R M+++ A D RY ++V HD A
Sbjct: 7 EVICGPMFSGKSTEILKRAIWYTHGTGTRIMLLKPAFDVRYAHDRVVNHDGIGFDATPIT 66
Query: 212 ELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ ++ +D+ + IDE QF C
Sbjct: 67 RMPEV---PEDVSAVFIDEAQF------------CC------------------------ 87
Query: 272 LNVPPPPEFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
P F D+V ++ G V V+ LD ++ F +L +A+ V KL +
Sbjct: 88 -----APHFEGDLVQSVRALLERGIDVGVSGLDTDWRGHPFPVTATLAGMADTVIKLRSR 142
Query: 331 CMSCFRDAAFT-KRIGQEKEVRI 352
C C +A + K+ G ++ + +
Sbjct: 143 CAVCGHEATKSFKKHGNDRTLEL 165
>gi|308190273|ref|YP_003923204.1| thymidine kinase [Mycoplasma fermentans JER]
gi|319777642|ref|YP_004137293.1| thymidine kinase [Mycoplasma fermentans M64]
gi|49354328|gb|AAT65056.1| thymidine kinase [Mycoplasma phage phiMFV1]
gi|307625015|gb|ADN69320.1| thymidine kinase [Mycoplasma fermentans JER]
gi|318038717|gb|ADV34916.1| Thymidine kinase [Mycoplasma fermentans M64]
Length = 192
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 60/206 (29%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT ELI+RI+ + A+ + ++++ D R+ ++ + K+ A
Sbjct: 11 EVITGPMFSGKTEELIKRIKILEIADIKTLVLKPKFDTRFSETEIVSRTGAKVIA----- 65
Query: 213 LNKLIPHTKDI--------DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
K I + DI + IDE F++
Sbjct: 66 --KNIKKSSDIMKFWDPSYKAVAIDEINFLD----------------------------- 94
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
++ + + G V+ + LD F R F +++ +A+ +
Sbjct: 95 ----------------EGILDVIDELVLKGVRVLCSGLDMDFLRRPFGVTPAILAIADHI 138
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEV 350
KL AVCM C A F+ R E+ +
Sbjct: 139 TKLKAVCMKCKSSAGFSFRKTNEQSL 164
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-- 73
+RI+ + A+ + ++++ D R+ ++ + K+ A K I + DI
Sbjct: 24 ELIKRIKILEIADIKTLVLKPKFDTRFSETEIVSRTGAKVIA-------KNIKKSSDIMK 76
Query: 74 ------DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
+ IDE F + ++ + + G V+ + LD F R F +++ +A+
Sbjct: 77 FWDPSYKAVAIDEINFLDEGILDVIDELVLKGVRVLCSGLDMDFLRRPFGVTPAILAIAD 136
Query: 127 CVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
+ KL AVCM C A F+ R E+ +
Sbjct: 137 HITKLKAVCMKCKSSAGFSFRKTNEQSL 164
>gi|33324258|gb|AAQ07938.1| thymidine kinase [African swine fever virus]
Length = 196
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 32 MIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHTKDIDVIGIDEGQFFPDVVS 89
+ ++ K+ R T K + Q + +E +L + DI + IDE FF D++
Sbjct: 42 VFIKSTKNTRDKTIKTHSGIQLRSKQCKIIESTQLSDVGSLIDIHAVVIDEAHFFDDLIK 101
Query: 90 FAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFR-DAAFTKRI 148
+ A+ KI+++A L+ +F++ F I+ + P V+ + CM C R +A F R
Sbjct: 102 -CRTWADEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRTCMRCNRHNACFNVRK 160
Query: 149 GQEKEVILG 157
+K +IL
Sbjct: 161 NADKTLILA 169
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 50/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++LGPMF+GKTT LI I + + + ++ K+ R T K + Q + +E
Sbjct: 13 SLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRDKTIKTHSGIQLRSKQCKIIE 72
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L + DI + IDE F
Sbjct: 73 STQLSDVGSLIDIHAVVIDEAHF------------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D++ + A+ KI+++A L+ +F++ F I+ + P V+ +
Sbjct: 96 ---------FDDLIK-CRTWADEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRT 145
Query: 331 CMSCFR-DAAFTKRIGQEKEV 350
CM C R +A F R +K +
Sbjct: 146 CMRCNRHNACFNVRKNADKTL 166
>gi|238809971|dbj|BAH69761.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 208
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 60/206 (29%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMFSGKT ELI+RI+ + A+ + ++++ D R+ ++ + K+ A
Sbjct: 27 EVITGPMFSGKTEELIKRIKILEIADIKTLVLKPKFDTRFSETEIVSRTGAKVIA----- 81
Query: 213 LNKLIPHTKDI--------DVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
K I + DI + IDE F++
Sbjct: 82 --KNIKKSSDIMKFWDPSYKAVAIDEINFLD----------------------------- 110
Query: 265 LANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECV 324
++ + + G V+ + LD F R F +++ +A+ +
Sbjct: 111 ----------------EGILDVIDELVLKGVRVLCSGLDMDFLRRPFGVTPAILAIADHI 154
Query: 325 EKLTAVCMSCFRDAAFTKRIGQEKEV 350
KL AVCM C A F+ R E+ +
Sbjct: 155 TKLKAVCMKCKSSAGFSFRKTNEQSL 180
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 16 HFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI-- 73
+RI+ + A+ + ++++ D R+ ++ + K+ A K I + DI
Sbjct: 40 ELIKRIKILEIADIKTLVLKPKFDTRFSETEIVSRTGAKVIA-------KNIKKSSDIMK 92
Query: 74 ------DVIGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 126
+ IDE F + ++ + + G V+ + LD F R F +++ +A+
Sbjct: 93 FWDPSYKAVAIDEINFLDEGILDVIDELVLKGVRVLCSGLDMDFLRRPFGVTPAILAIAD 152
Query: 127 CVEKLTAVCMSCFRDAAFTKRIGQEKEV 154
+ KL AVCM C A F+ R E+ +
Sbjct: 153 HITKLKAVCMKCKSSAGFSFRKTNEQSL 180
>gi|335041502|ref|ZP_08534533.1| thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
gi|334178609|gb|EGL81343.1| thymidine kinase [Caldalkalibacillus thermarum TA2.A1]
Length = 103
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 12/102 (11%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
E I G MF+GKTTELIRR+ ++ + D+RY T + +H+ + L AV
Sbjct: 5 ETIYGCMFAGKTTELIRRVEGKNVLAFKPKL-----DNRYSTGHIVSHNGETLKAVLIDR 59
Query: 213 LNKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQ 253
+++ H + I IDE QF+ IG +VCR+ Q
Sbjct: 60 AEEIMDHVNGKAEYIAIDEVQFLNSIG------SVCRQLANQ 95
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 39 DDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIGIDEGQFFPDVVSFAESMANA 97
D+RY T + +H+ + L AV +++ H + I IDE QF + S +AN
Sbjct: 36 DNRYSTGHIVSHNGETLKAVLIDRAEEIMDHVNGKAEYIAIDEVQFLNSIGSVCRQLANQ 95
Query: 98 GKIVVVAA 105
G VV A
Sbjct: 96 GYKVVCAG 103
>gi|188586375|ref|YP_001917920.1| thymidine kinase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351062|gb|ACB85332.1| Thymidine kinase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 3/123 (2%)
Query: 19 RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT--KDIDVI 76
RR+ +A ++ + KD+R + +H+ L+A S +++ T K D +
Sbjct: 27 RRLDHLGWAQKSYILFKPHKDNRNEHNIAKSHNGNTLSATSVSSPQEILDITIRKQPDAV 86
Query: 77 GIDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 135
IDE QFF ++ + + G V++A L T + FN + L+ +++ + + VC
Sbjct: 87 AIDEAQFFDTKIIDIVSQLRDQGYWVIIAGLSSTSEGRPFNSMPYLLSISDNITPIYGVC 146
Query: 136 MSC 138
C
Sbjct: 147 AKC 149
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 67/178 (37%), Gaps = 47/178 (26%)
Query: 159 MFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVELNKLIP 218
MF+GKT EL+RR+ +A ++ + KD+R + +H+ L+A S +++
Sbjct: 17 MFAGKTRELLRRLDHLGWAQKSYILFKPHKDNRNEHNIAKSHNGNTLSATSVSSPQEILD 76
Query: 219 HT--KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVPP 276
T K D + IDE QF +
Sbjct: 77 ITIRKQPDAVAIDEAQFFDT---------------------------------------- 96
Query: 277 PPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 334
++ + + G V++A L T + FN + L+ +++ + + VC C
Sbjct: 97 -----KIIDIVSQLRDQGYWVIIAGLSSTSEGRPFNSMPYLLSISDNITPIYGVCAKC 149
>gi|33324244|gb|AAQ07931.1| truncated thymidine kinase [African swine fever virus]
Length = 185
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 13 YIVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHT 70
+++H + R + + + ++ K+ R T + + Q + +E +L +
Sbjct: 26 FLIHCINMLERLEK---KVVFIKSTKNTRDKTIQTHSGIQLRPNQCKIIESTQLSDVGSL 82
Query: 71 KDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
D + IDE FF D++ + A+ KI+++A L+ +F++ F I+ + P V+
Sbjct: 83 TDTHAVVIDEAHFFDDLIR-CRTWADEKKIIILAGLNASFEQKMFQPIVRIFPYCNWVKY 141
Query: 131 LTAVCMSCFR-DAAFTKRIGQEKEVILG 157
+ CM C R +A F R +K +IL
Sbjct: 142 IGRTCMKCNRHNACFNVRKNADKTLILA 169
>gi|157364344|ref|YP_001471111.1| thymidine kinase [Thermotoga lettingae TMO]
gi|166987681|sp|A8F7B3.1|KITH_THELT RecName: Full=Thymidine kinase
gi|157314948|gb|ABV34047.1| Thymidine kinase [Thermotoga lettingae TMO]
Length = 185
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 46/182 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
+I+GPM+SGKTTEL+ + Y+ + ++ + + D+RY + V TH ++ A++ +
Sbjct: 7 LIVGPMYSGKTTELLSYVEIYRLGRKKTIVFKPSLDNRYGVDCVKTHAGVEVEAIAVEKS 66
Query: 214 NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+ + K +D + +DE QF +
Sbjct: 67 ADAMKYIKQPVDAVFVDEVQFFD------------------------------------- 89
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
D+V + + + A LD TF++ F + L+ LA + K AVC
Sbjct: 90 --------KDLVKIVRQLLDQDVDIFCAGLDMTFKQNPFETTMLLMSLANEIIKKKAVCH 141
Query: 333 SC 334
C
Sbjct: 142 IC 143
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 24 YQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKD-IDVIGIDEGQ 82
Y+ + ++ + + D+RY + V TH ++ A++ + + + K +D + +DE Q
Sbjct: 27 YRLGRKKTIVFKPSLDNRYGVDCVKTHAGVEVEAIAVEKSADAMKYIKQPVDAVFVDEVQ 86
Query: 83 FF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
FF D+V + + + A LD TF++ F + L+ LA + K AVC C
Sbjct: 87 FFDKDLVKIVRQLLDQDVDIFCAGLDMTFKQNPFETTMLLMSLANEIIKKKAVCHIC 143
>gi|33324264|gb|AAQ07941.1| thymidine kinase [African swine fever virus]
gi|303398735|emb|CBW46716.1| K196R [African swine fever virus Georgia 2007/1]
Length = 196
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 13 YIVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHT 70
+++H + R + + + ++ K+ R T K + Q + +E +L +
Sbjct: 26 FLIHCIYMLERLEK---KVVFIKSTKNTRDKTIKTHSGIQLRPKQCKIIESTQLSDVGSL 82
Query: 71 KDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
DI + +DE FF D+++ + A KI+++A L+ +F++ F I+ + P V+
Sbjct: 83 TDIHAVVVDEAHFFDDLIT-CRTWAEEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKY 141
Query: 131 LTAVCMSCFR-DAAFTKRIGQEKEVILG 157
+ CM C + +A F R +K +IL
Sbjct: 142 IGRTCMKCNQHNACFNVRKNADKTLILA 169
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 50/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++LGPMF+GKTT LI I + + + ++ K+ R T K + Q + +E
Sbjct: 13 SLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRDKTIKTHSGIQLRPKQCKIIE 72
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L + DI + +DE F
Sbjct: 73 STQLSDVGSLTDIHAVVVDEAHF------------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D+++ + A KI+++A L+ +F++ F I+ + P V+ +
Sbjct: 96 ---------FDDLIT-CRTWAEEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRT 145
Query: 331 CMSCFR-DAAFTKRIGQEKEV 350
CM C + +A F R +K +
Sbjct: 146 CMKCNQHNACFNVRKNADKTL 166
>gi|215275157|sp|P0C8I3.1|KITH_ASFK5 RecName: Full=Thymidine kinase; Short=TDK
gi|33324242|gb|AAQ07930.1| truncated thymidine kinase [African swine fever virus]
gi|33324246|gb|AAQ07932.1| truncated thymidine kinase [African swine fever virus]
gi|33324248|gb|AAQ07933.1| truncated thymidine kinase [African swine fever virus]
Length = 185
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 13 YIVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHT 70
+++H + R + + + ++ K+ R T + + Q + +E +L +
Sbjct: 26 FLIHCINMLERLEK---KVVFIKSTKNTRDKTIQTHSGIQLRPNQCKIIESAQLSDVGSL 82
Query: 71 KDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
D + IDE FF D++ + A+ KI+++A L+ +F++ F I+ + P V+
Sbjct: 83 TDTHAVVIDEAHFFDDLIR-CRTWADEKKIIILAGLNASFEQKMFQPIVRIFPYCNWVKY 141
Query: 131 LTAVCMSCFR-DAAFTKRIGQEKEVILG 157
+ CM C R +A F R +K +IL
Sbjct: 142 IGRTCMKCNRHNACFNVRKNADKTLILA 169
>gi|389843177|ref|YP_006345257.1| thymidine kinase [Mesotoga prima MesG1.Ag.4.2]
gi|387857923|gb|AFK06014.1| thymidine kinase [Mesotoga prima MesG1.Ag.4.2]
Length = 190
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVS---A 210
V++GPM+SGKT+ L+ I Y R + + DDRY ++ V +H Q A++ +
Sbjct: 7 VVVGPMYSGKTSTLLSMIEIYTLGKKRIKVFKPVIDDRYSSDHVVSHSGQMAEAINVYDS 66
Query: 211 VELNKLIPHTKD-IDVIGIDEGQFVE----------VIGGSDKYMAVCRECYKQKAPIKR 259
E+ +++ K +D I IDE F + + G D + C K
Sbjct: 67 SEIKEIVSKEKGKLDAIFIDEINFFDENLLRIVEEIIFSGVDVF------CVGLDLSYKH 120
Query: 260 SPFKTLANENAA 271
PF AN AA
Sbjct: 121 RPFAVTANLMAA 132
>gi|383786661|ref|YP_005471230.1| thymidine kinase [Fervidobacterium pennivorans DSM 9078]
gi|383109508|gb|AFG35111.1| thymidine kinase [Fervidobacterium pennivorans DSM 9078]
Length = 200
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
VI GPM+SGKTTEL+ Y+ + +I + A D RY E V TH K+ A +
Sbjct: 9 VITGPMYSGKTTELLNFAEIYEIGKKKTLIFKPAIDTRYSAEDVVTHKFHKMPARVVKDS 68
Query: 214 NKLIPHTKDI----DVIGIDEGQFVEV 236
+L + + D + IDE F +V
Sbjct: 69 TELFEYYNSLIEKPDAVFIDEVHFFDV 95
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Query: 24 YQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDI----DVIGID 79
Y+ + +I + A D RY E V TH K+ A + +L + + D + ID
Sbjct: 29 YEIGKKKTLIFKPAIDTRYSAEDVVTHKFHKMPARVVKDSTELFEYYNSLIEKPDAVFID 88
Query: 80 EGQFFP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
E FF ++V+ + + G V A LD ++ F L+ LA+ + K AVC C
Sbjct: 89 EVHFFDVELVNITKKITLDGVDVYCAGLDMSYLWEPFETTAKLMALADEIIKKKAVCEVC 148
>gi|71894532|ref|YP_278640.1| thymidine kinase [Mycoplasma synoviae 53]
gi|71851320|gb|AAZ43929.1| thymidine kinase [Mycoplasma synoviae 53]
Length = 183
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 46/192 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
EVI GPMF+GK+ E+IR + Q A ++ + + D R+ + + K+ ++ +
Sbjct: 11 EVITGPMFAGKSNEIIRILNVNQIAGFKPLSFKPDFDTRWSVNHIVSRTGSKMETINLKD 70
Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
+ H KD VI DE F ++
Sbjct: 71 PKDIWNHIKKDTQVIAFDEVHFFDM----------------------------------- 95
Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
+V+ + + V+V+ LD + F + L LA+ ++KL AVC
Sbjct: 96 ----------SIVAEIQKLIEKKYKVIVSGLDMDYLGKPFEVVSQLCCLADKIKKLKAVC 145
Query: 332 MSCFRDAAFTKR 343
M+C A T R
Sbjct: 146 MNCHGVANMTYR 157
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 25 QYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTK-DIDVIGIDEGQF 83
Q A ++ + + D R+ + + K+ ++ + + H K D VI DE F
Sbjct: 33 QIAGFKPLSFKPDFDTRWSVNHIVSRTGSKMETINLKDPKDIWNHIKKDTQVIAFDEVHF 92
Query: 84 FP-DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDA 142
F +V+ + + V+V+ LD + F + L LA+ ++KL AVCM+C A
Sbjct: 93 FDMSIVAEIQKLIEKKYKVIVSGLDMDYLGKPFEVVSQLCCLADKIKKLKAVCMNCHGVA 152
Query: 143 AFT-KRIGQEKEVILG 157
T +++ + +LG
Sbjct: 153 NMTYRKVDNNERNLLG 168
>gi|9628158|ref|NP_042744.1| thymidine kinase [African swine fever virus]
gi|125424|sp|P18555.1|KITH_ASFB7 RecName: Full=Thymidine kinase; Short=TDK
gi|210658|gb|AAA42737.1| thymidine kinase [African swine fever virus]
gi|780420|gb|AAA65280.1| thymidine kinase [African swine fever virus]
gi|33324250|gb|AAQ07934.1| thymidine kinase [African swine fever virus]
gi|33324252|gb|AAQ07935.1| thymidine kinase [African swine fever virus]
gi|33324254|gb|AAQ07936.1| thymidine kinase [African swine fever virus]
gi|33324256|gb|AAQ07937.1| thymidine kinase [African swine fever virus]
gi|33324260|gb|AAQ07939.1| thymidine kinase [African swine fever virus]
gi|33324262|gb|AAQ07940.1| thymidine kinase [African swine fever virus]
gi|33324274|gb|AAQ07946.1| thymidine kinase [African swine fever virus]
gi|48144466|emb|CAG33722.1| thymidine kinase [African swine fever virus]
gi|162849260|emb|CAN10149.1| Thymidine kinase [African swine fever virus Benin 97/1]
gi|162849433|emb|CAN10398.1| Thymidine kinase [African swine fever virus OURT 88/3]
gi|291289494|emb|CBH29151.1| BA71V-K196R [African swine fever virus E75]
gi|1097440|prf||2113434BA thymidine kinase
Length = 196
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 13 YIVHFCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKL--IPHT 70
+++H + R + + + ++ K+ R T K + Q + +E +L +
Sbjct: 26 FLIHCIYMLERLEK---KVVFIKSTKNTRDKTIKTHSGIQLRPKQCKIIESTQLSDVGSL 82
Query: 71 KDIDVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEK 130
DI + +DE FF D++ + A KI+++A L+ +F++ F I+ + P V+
Sbjct: 83 TDIHAVVVDEAHFFDDLIK-CRTWAEEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKY 141
Query: 131 LTAVCMSCFR-DAAFTKRIGQEKEVILG 157
+ CM C + +A F R +K +IL
Sbjct: 142 IGRTCMKCNQHNACFNVRKNADKTLILA 169
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 50/201 (24%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
++LGPMF+GKTT LI I + + + ++ K+ R T K + Q + +E
Sbjct: 13 SLVLGPMFAGKTTFLIHCIYMLERLEKKVVFIKSTKNTRDKTIKTHSGIQLRPKQCKIIE 72
Query: 213 LNKL--IPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+L + DI + +DE F
Sbjct: 73 STQLSDVGSLTDIHAVVVDEAHF------------------------------------- 95
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
F D++ + A KI+++A L+ +F++ F I+ + P V+ +
Sbjct: 96 ---------FDDLIK-CRTWAEEEKIIILAGLNASFEQKMFPPIVRIFPYCSWVKYIGRT 145
Query: 331 CMSCFR-DAAFTKRIGQEKEV 350
CM C + +A F R +K +
Sbjct: 146 CMKCNQHNACFNVRKNADKTL 166
>gi|376269245|ref|YP_005121957.1| thymidine kinase [Bacillus cereus F837/76]
gi|364515045|gb|AEW58444.1| Thymidine kinase [Bacillus cereus F837/76]
Length = 60
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHD 201
EVI G MFSGK+ ELIRR+RR +A ++ + D+RY E V +H+
Sbjct: 11 EVICGSMFSGKSEELIRRVRRTPFAKQHAIVFKPCIDNRYSEEDVVSHN 59
>gi|160902945|ref|YP_001568526.1| thymidine kinase [Petrotoga mobilis SJ95]
gi|160360589|gb|ABX32203.1| Thymidine kinase [Petrotoga mobilis SJ95]
Length = 196
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 46/182 (25%)
Query: 154 VILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVEL 213
VI+GPM+SGKT+ELI I Y + + + D+RY+ + +H + A+
Sbjct: 8 VIVGPMYSGKTSELISFIEIYTLGKKKIKVFKPLLDNRYNETYIVSHSNTSVKAIPINNS 67
Query: 214 NKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
+++P D + IDE QF++ P + + E
Sbjct: 68 AEILPKLDGDEKAVFIDEIQFLD------------------------EPLREVVVE---- 99
Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
M N+GK V A LD +++ F L+ A+ V K AVC
Sbjct: 100 -----------------MINSGKDVYCAGLDLSYKNNPFKVTSLLMAHADTVIKKKAVCH 142
Query: 333 SC 334
C
Sbjct: 143 EC 144
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 21 IRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDVIGID 79
I Y + + + D+RY+ + +H + A+ +++P D + ID
Sbjct: 25 IEIYTLGKKKIKVFKPLLDNRYNETYIVSHSNTSVKAIPINNSAEILPKLDGDEKAVFID 84
Query: 80 EGQFFPDVV-SFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
E QF + + M N+GK V A LD +++ F L+ A+ V K AVC C
Sbjct: 85 EIQFLDEPLREVVVEMINSGKDVYCAGLDLSYKNNPFKVTSLLMAHADTVIKKKAVCHEC 144
>gi|109892478|sp|Q2NIM1.2|KITH_AYWBP RecName: Full=Thymidine kinase
Length = 209
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 47/198 (23%)
Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDT-EKVSTHDQQKLTAVSAV 211
EVI GPMF+GKT LI+R + + + + DDRY E++ +H++ + A+
Sbjct: 12 EVICGPMFAGKTESLIQRRNKALKLKKKILSFKPRIDDRYSVKEEIVSHNRNNIPAILID 71
Query: 212 ELNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENA 270
+ ++ T +I+V+ IDE QF++
Sbjct: 72 KSKDILTFITPEINVVIIDESQFLD----------------------------------- 96
Query: 271 ALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 330
D+++ + +AN V+++ L+ F F + L+ +A+ V KLT++
Sbjct: 97 ----------NDIIAIVDYLANCNIEVIISGLELDFCGKPFGPMPYLLAIADTVTKLTSI 146
Query: 331 CMSCFRDAAFTKRIGQEK 348
C A T+R+ + K
Sbjct: 147 CAISGGKANRTQRLIEGK 164
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 39 DDRYDT-EKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIGIDEGQFFP-DVVSFAESMA 95
DDRY E++ +H++ + A+ + ++ T +I+V+ IDE QF D+++ + +A
Sbjct: 48 DDRYSVKEEIVSHNRNNIPAILIDKSKDILTFITPEINVVIIDESQFLDNDIIAIVDYLA 107
Query: 96 NAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTKRIGQEK 152
N V+++ L+ F F + L+ +A+ V KLT++C A T+R+ + K
Sbjct: 108 NCNIEVIISGLELDFCGKPFGPMPYLLAIADTVTKLTSICAISGGKANRTQRLIEGK 164
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,319,829,062
Number of Sequences: 23463169
Number of extensions: 217424184
Number of successful extensions: 548972
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 543196
Number of HSP's gapped (non-prelim): 3868
length of query: 353
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 210
effective length of database: 9,003,962,200
effective search space: 1890832062000
effective search space used: 1890832062000
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 77 (34.3 bits)