BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy8456
         (353 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A5D7R8|KITH_BOVIN Thymidine kinase, cytosolic OS=Bos taurus GN=TK1 PE=2 SV=1
          Length = 238

 Score =  182 bits (463), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 122/200 (61%), Gaps = 47/200 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           +VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY +   STHD+  + A+ A  
Sbjct: 22  QVILGPMFSGKSTELMRRVRRFQVAQYKCLVIKYAKDTRYSS-LFSTHDRNTMEALPACL 80

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           L  +I   + + VIGIDEGQF                                       
Sbjct: 81  LRDVIQDAQRVAVIGIDEGQF--------------------------------------- 101

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
                  FPD+V F E+MAN+GK V+VAALDGTFQR  F  IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCENMANSGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCM 154

Query: 333 SCFRDAAFTKRIGQEKEVRI 352
            CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGVEKEVEV 174



 Score =  174 bits (441), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 105/136 (77%), Gaps = 1/136 (0%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RR+Q A Y+C++++YAKD RY +   +THD+  + A+ A  L  +I   + + VIGI
Sbjct: 38  RRVRRFQVAQYKCLVIKYAKDTRYSS-LFSTHDRNTMEALPACLLRDVIQDAQRVAVIGI 96

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E+MAN+GK V+VAALDGTFQR  F  IL+L+PLAE V KLTAVCM C
Sbjct: 97  DEGQFFPDIVEFCENMANSGKTVIVAALDGTFQRKAFGTILNLVPLAESVVKLTAVCMEC 156

Query: 139 FRDAAFTKRIGQEKEV 154
           FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGVEKEV 172



 Score = 43.9 bits (102), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 7/81 (8%)

Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
           KLTAV  +E  +   +TK + V      + VEVIGG+DKY +VCR CY +KA  + +   
Sbjct: 148 KLTAV-CMECFREAAYTKRLGV-----EKEVEVIGGADKYHSVCRLCYFKKASGQPAVLD 201

Query: 264 TLAN-ENAALNVPPPPEFPDV 283
           +  N EN  + +  P E P V
Sbjct: 202 SEENKENCPMTLGKPAEAPGV 222


>sp|P68563|KITH_VACCW Thymidine kinase OS=Vaccinia virus (strain Western Reserve) GN=TK
           PE=1 SV=1
          Length = 177

 Score =  181 bits (458), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G   ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+
Sbjct: 3   GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
            A +L  ++    D  VIGIDEGQF                                   
Sbjct: 62  EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLT
Sbjct: 87  -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159



 Score =  173 bits (439), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+ A +L  ++    D  VIGI
Sbjct: 23  RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82  DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141

Query: 139 FRDAAFTKRIGQEKEV-ILG 157
           F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161



 Score = 33.5 bits (75), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 16/18 (88%)

Query: 234 VEVIGGSDKYMAVCRECY 251
           +E+IGG+D Y +VCR+CY
Sbjct: 157 IEIIGGNDMYQSVCRKCY 174


>sp|P68564|KITH_VACCC Thymidine kinase OS=Vaccinia virus (strain Copenhagen) GN=TK PE=3
           SV=1
          Length = 177

 Score =  181 bits (458), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G   ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+
Sbjct: 3   GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
            A +L  ++    D  VIGIDEGQF                                   
Sbjct: 62  EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLT
Sbjct: 87  -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159



 Score =  173 bits (439), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+ A +L  ++    D  VIGI
Sbjct: 23  RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82  DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141

Query: 139 FRDAAFTKRIGQEKEV-ILG 157
           F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161



 Score = 33.5 bits (75), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 16/18 (88%)

Query: 234 VEVIGGSDKYMAVCRECY 251
           +E+IGG+D Y +VCR+CY
Sbjct: 157 IEIIGGNDMYQSVCRKCY 174


>sp|P04184|KITH_MOUSE Thymidine kinase, cytosolic OS=Mus musculus GN=Tk1 PE=2 SV=3
          Length = 233

 Score =  181 bits (458), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           +VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY +   STHD+  + A+ A  
Sbjct: 22  QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           L  +   +  + VIGIDEGQF                                       
Sbjct: 81  LRDVTQESLGVAVIGIDEGQF--------------------------------------- 101

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
                  FPD+V F E MAN GK V+VAALDGTFQR  F  IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154

Query: 333 SCFRDAAFTKRIGQEKEVRI 352
            CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174



 Score =  172 bits (436), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RR+Q A Y+C++++YAKD RY +   +THD+  + A+ A  L  +   +  + VIGI
Sbjct: 38  RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLRDVTQESLGVAVIGI 96

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GK V+VAALDGTFQR  F  IL+L+PLAE V KLTAVCM C
Sbjct: 97  DEGQFFPDIVDFCEMMANEGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156

Query: 139 FRDAAFTKRIGQEKEV 154
           FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172



 Score = 37.7 bits (86), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 11/66 (16%)

Query: 204 KLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFK 263
           KLTAV  +E  +   +TK +   G+++   VEVIGG+DKY +VCR CY      K+S  +
Sbjct: 148 KLTAV-CMECFREAAYTKRL---GLEKE--VEVIGGADKYHSVCRLCY-----FKKSSAQ 196

Query: 264 TLANEN 269
           T  ++N
Sbjct: 197 TAGSDN 202


>sp|O57203|KITH_VACCA Thymidine kinase OS=Vaccinia virus (strain Ankara) GN=TK PE=1 SV=1
          Length = 177

 Score =  181 bits (458), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 93/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G   ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+
Sbjct: 3   GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
            A +L  ++    D  VIGIDEGQF                                   
Sbjct: 62  EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLT
Sbjct: 87  -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159



 Score =  173 bits (439), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+ A +L  ++    D  VIGI
Sbjct: 23  RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82  DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141

Query: 139 FRDAAFTKRIGQEKEV-ILG 157
           F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161



 Score = 33.1 bits (74), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 16/18 (88%)

Query: 234 VEVIGGSDKYMAVCRECY 251
           +E+IGG+D Y +VCR+CY
Sbjct: 157 IEIIGGNDMYQSVCRKCY 174


>sp|P04183|KITH_HUMAN Thymidine kinase, cytosolic OS=Homo sapiens GN=TK1 PE=1 SV=2
          Length = 234

 Score =  180 bits (456), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 119/200 (59%), Gaps = 47/200 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           +VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY +    THD+  + A+ A  
Sbjct: 22  QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACL 80

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           L  +      + VIGIDEGQF                                       
Sbjct: 81  LRDVAQEALGVAVIGIDEGQF--------------------------------------- 101

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
                  FPD+V F E+MANAGK V+VAALDGTFQR  F  IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCM 154

Query: 333 SCFRDAAFTKRIGQEKEVRI 352
            CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGTEKEVEV 174



 Score =  173 bits (438), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/136 (59%), Positives = 102/136 (75%), Gaps = 1/136 (0%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RR+Q A Y+C++++YAKD RY +    THD+  + A+ A  L  +      + VIGI
Sbjct: 38  RRVRRFQIAQYKCLVIKYAKDTRYSSS-FCTHDRNTMEALPACLLRDVAQEALGVAVIGI 96

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E+MANAGK V+VAALDGTFQR  F  IL+L+PLAE V KLTAVCM C
Sbjct: 97  DEGQFFPDIVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMEC 156

Query: 139 FRDAAFTKRIGQEKEV 154
           FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGTEKEV 172


>sp|Q9JFB7|KITH_VACCT Thymidine kinase OS=Vaccinia virus (strain Tian Tan) GN=TK PE=3
           SV=1
          Length = 177

 Score =  179 bits (455), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/204 (45%), Positives = 122/204 (59%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G   ++++GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+
Sbjct: 3   GGHIQLMIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
            A +L  ++    D  VIGIDEGQF                                   
Sbjct: 62  EATKLCDVLESITDFSVIGIDEGQF----------------------------------- 86

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLT
Sbjct: 87  -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLT 135

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM CF++A+F+KR+G+E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGEETEIEI 159



 Score =  173 bits (439), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/140 (57%), Positives = 107/140 (76%), Gaps = 2/140 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+ A +L  ++    D  VIGI
Sbjct: 23  RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLESITDFSVIGI 81

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82  DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILNLIPLSEMVVKLTAVCMKC 141

Query: 139 FRDAAFTKRIGQEKEV-ILG 157
           F++A+F+KR+G+E E+ I+G
Sbjct: 142 FKEASFSKRLGEETEIEIIG 161



 Score = 33.5 bits (75), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 16/18 (88%)

Query: 234 VEVIGGSDKYMAVCRECY 251
           +E+IGG+D Y +VCR+CY
Sbjct: 157 IEIIGGNDMYQSVCRKCY 174


>sp|P04047|KITH_CHICK Thymidine kinase, cytosolic OS=Gallus gallus GN=TK1 PE=3 SV=1
          Length = 224

 Score =  178 bits (452), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 115/200 (57%), Gaps = 46/200 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           +VI GPMFSGK+TEL+RR+RR+Q A YRC++V+YAKD RY T  VSTHD+  + A  A  
Sbjct: 22  QVIFGPMFSGKSTELMRRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDRNTMEARPACA 81

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           L  +        VIGIDEGQF                                       
Sbjct: 82  LQDVYQEALGSAVIGIDEGQF--------------------------------------- 102

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
                  FPD+V F E MAN GK V+VAALDGTFQR  F  IL+L+PLAE V KL AVCM
Sbjct: 103 -------FPDIVEFCEKMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLNAVCM 155

Query: 333 SCFRDAAFTKRIGQEKEVRI 352
            C+R+A++TKR+G E+EV +
Sbjct: 156 ECYREASYTKRLGAEREVEV 175



 Score =  171 bits (434), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 99/136 (72%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RR+Q A YRC++V+YAKD RY T  V+THD+  + A  A  L  +        VIGI
Sbjct: 38  RRVRRFQLAQYRCLLVKYAKDTRYCTTGVSTHDRNTMEARPACALQDVYQEALGSAVIGI 97

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GK V+VAALDGTFQR  F  IL+L+PLAE V KL AVCM C
Sbjct: 98  DEGQFFPDIVEFCEKMANTGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLNAVCMEC 157

Query: 139 FRDAAFTKRIGQEKEV 154
           +R+A++TKR+G E+EV
Sbjct: 158 YREASYTKRLGAEREV 173



 Score = 42.4 bits (98), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 7/42 (16%)

Query: 234 VEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAALNVP 275
           VEVIGG+DKY +VCR CY QK P      + L +EN   NVP
Sbjct: 173 VEVIGGADKYHSVCRACYFQKRP------QQLGSENKE-NVP 207


>sp|P04364|KITH_VAR67 Thymidine kinase OS=Variola virus (isolate Human/India/Ind3/1967)
           GN=TK PE=3 SV=2
          Length = 177

 Score =  177 bits (448), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 92/204 (45%), Positives = 120/204 (58%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G   ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+
Sbjct: 3   GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEAL 61

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
            A +L  ++    D  VIGIDEGQF                                   
Sbjct: 62  EATKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FPD+V F E MAN GKIV+VAALDGTFQR  FN+IL LIPL+E V KLT
Sbjct: 87  -----------FPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLT 135

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM CF++A+F+KR+G E ++ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETKIEI 159



 Score =  171 bits (434), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 85/165 (51%), Positives = 111/165 (67%), Gaps = 12/165 (7%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+ A +L  ++    D  VIGI
Sbjct: 23  RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFEALEATKLCDVLEAITDFSVIGI 81

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GKIV+VAALDGTFQR  FN+IL LIPL+E V KLTAVCM C
Sbjct: 82  DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRKPFNNILDLIPLSEMVVKLTAVCMKC 141

Query: 139 FRDAAFTKRIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMI 183
           F++A+F+KR+G E ++           E+I  I  YQ    +C I
Sbjct: 142 FKEASFSKRLGTETKI-----------EIIGGIDMYQSVCRKCYI 175



 Score = 32.0 bits (71), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 234 VEVIGGSDKYMAVCRECY 251
           +E+IGG D Y +VCR+CY
Sbjct: 157 IEIIGGIDMYQSVCRKCY 174


>sp|P09768|KITH_CRIGR Thymidine kinase, cytosolic OS=Cricetulus griseus GN=TK1 PE=3 SV=1
          Length = 234

 Score =  177 bits (448), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 117/200 (58%), Gaps = 47/200 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           +VILGPMFSGK+TEL+RR+RR+Q A  +C++++YAKD RY +   STHD+  + A+ A  
Sbjct: 22  QVILGPMFSGKSTELMRRVRRFQIAQNKCLVIKYAKDTRYSSS-FSTHDRNTMDALPACL 80

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           L  +        VIGIDEGQF                                       
Sbjct: 81  LRDVAQEALGAAVIGIDEGQF--------------------------------------- 101

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
                  FPD+V F E MANAGK V+VAALDGTFQR  F  IL+L+PLAE V KLTAVCM
Sbjct: 102 -------FPDIVEFCEVMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCM 154

Query: 333 SCFRDAAFTKRIGQEKEVRI 352
            CFR+AA+TKR+G EKEV +
Sbjct: 155 ECFREAAYTKRLGLEKEVEV 174



 Score =  168 bits (425), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 80/136 (58%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RR+Q A  +C++++YAKD RY +   +THD+  + A+ A  L  +        VIGI
Sbjct: 38  RRVRRFQIAQNKCLVIKYAKDTRYSSS-FSTHDRNTMDALPACLLRDVAQEALGAAVIGI 96

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MANAGK V+VAALDGTFQR  F  IL+L+PLAE V KLTAVCM C
Sbjct: 97  DEGQFFPDIVEFCEVMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMEC 156

Query: 139 FRDAAFTKRIGQEKEV 154
           FR+AA+TKR+G EKEV
Sbjct: 157 FREAAYTKRLGLEKEV 172



 Score = 37.7 bits (86), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 15/25 (60%), Positives = 21/25 (84%)

Query: 234 VEVIGGSDKYMAVCRECYKQKAPIK 258
           VEVIGG+DKY +VCR CY +K+ ++
Sbjct: 172 VEVIGGADKYHSVCRVCYFKKSSVQ 196


>sp|P04363|KITH_MONPV Thymidine kinase OS=Monkeypox virus GN=TK PE=3 SV=2
          Length = 177

 Score =  176 bits (445), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 119/204 (58%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G   ++I+GPM SGK+TELIRR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+
Sbjct: 3   GGHIQLIIGPMLSGKSTELIRRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAAL 61

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
              +L  ++    D  VIGIDEGQF                                   
Sbjct: 62  EVTKLCDVLEAITDFSVIGIDEGQF----------------------------------- 86

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLT
Sbjct: 87  -----------FPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLT 135

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGAETEIEI 159



 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/140 (57%), Positives = 105/140 (75%), Gaps = 2/140 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RRYQ A Y+C+ ++Y+ D+RY T  + THD+    A+   +L  ++    D  VIGI
Sbjct: 23  RRVRRYQIAQYKCVTIKYSNDNRYGT-GLWTHDKNNFAALEVTKLCDVLEAITDFSVIGI 81

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GKIV+VAALDGTFQR  FN+IL+LIPL+E V KLTAVCM C
Sbjct: 82  DEGQFFPDIVEFCERMANEGKIVIVAALDGTFQRRPFNNILNLIPLSEMVVKLTAVCMKC 141

Query: 139 FRDAAFTKRIGQEKEV-ILG 157
           F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGAETEIEIIG 161



 Score = 33.5 bits (75), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 16/18 (88%)

Query: 234 VEVIGGSDKYMAVCRECY 251
           +E+IGG+D Y +VCR+CY
Sbjct: 157 IEIIGGNDMYQSVCRKCY 174


>sp|Q90029|KITH_RACVI Thymidine kinase OS=Raccoon poxvirus GN=TK PE=3 SV=1
          Length = 177

 Score =  173 bits (439), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/204 (44%), Positives = 116/204 (56%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G   ++I+GPMFSGK+TELIRR+RRYQ A Y+C+ ++Y  D RY T  + THD+   +A+
Sbjct: 3   GGHIQLIIGPMFSGKSTELIRRVRRYQIAQYKCITIKYTNDTRYGT-GLWTHDKHNFSAM 61

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
              +L  +I    D  VIGIDEGQF                                   
Sbjct: 62  ETTKLLNIIDAVTDFSVIGIDEGQF----------------------------------- 86

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FPD+V F E MAN GKIV+VAALDGTFQR  F  I +LIPL+E V KLT
Sbjct: 87  -----------FPDIVEFCEYMANNGKIVIVAALDGTFQRKPFTTISNLIPLSEMVVKLT 135

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM CF++A+F+KR+G E E+ I
Sbjct: 136 AVCMKCFKEASFSKRLGTETEIEI 159



 Score =  166 bits (419), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/140 (56%), Positives = 101/140 (72%), Gaps = 2/140 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RRYQ A Y+C+ ++Y  D RY T  + THD+   +A+   +L  +I    D  VIGI
Sbjct: 23  RRVRRYQIAQYKCITIKYTNDTRYGT-GLWTHDKHNFSAMETTKLLNIIDAVTDFSVIGI 81

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F E MAN GKIV+VAALDGTFQR  F  I +LIPL+E V KLTAVCM C
Sbjct: 82  DEGQFFPDIVEFCEYMANNGKIVIVAALDGTFQRKPFTTISNLIPLSEMVVKLTAVCMKC 141

Query: 139 FRDAAFTKRIGQEKEV-ILG 157
           F++A+F+KR+G E E+ I+G
Sbjct: 142 FKEASFSKRLGTETEIEIIG 161



 Score = 33.1 bits (74), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 15/18 (83%)

Query: 234 VEVIGGSDKYMAVCRECY 251
           +E+IGG D Y +VCR+CY
Sbjct: 157 IEIIGGEDMYQSVCRKCY 174


>sp|P16600|KITH_SHEVK Thymidine kinase OS=Sheeppox virus (strain KS-1) GN=TK PE=3 SV=1
          Length = 177

 Score =  172 bits (435), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 89/200 (44%), Positives = 117/200 (58%), Gaps = 47/200 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
            +I+GPMFSGK+TELIR ++RYQ A Y+C +V+Y KD RY    V THD   ++A+S   
Sbjct: 7   HLIIGPMFSGKSTELIRIVKRYQIAQYKCCVVKYLKDIRYGNS-VYTHDNNHVSAISTTL 65

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           L  ++    + D+IGIDEGQF                                       
Sbjct: 66  LYDVVDKIMNFDIIGIDEGQF--------------------------------------- 86

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
                  F D+VSF+E+MAN GKI+++AALD TFQR  FNDIL LIPL+E V KL AVCM
Sbjct: 87  -------FKDIVSFSENMANMGKIIIIAALDSTFQRKEFNDILKLIPLSEKVTKLNAVCM 139

Query: 333 SCFRDAAFTKRIGQEKEVRI 352
            C++DAAF+KRI +EKE+ +
Sbjct: 140 ECYKDAAFSKRITKEKEIEL 159



 Score =  166 bits (421), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/138 (56%), Positives = 102/138 (73%), Gaps = 1/138 (0%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           R ++RYQ A Y+C +V+Y KD RY    V THD   ++A+S   L  ++    + D+IGI
Sbjct: 23  RIVKRYQIAQYKCCVVKYLKDIRYGNS-VYTHDNNHVSAISTTLLYDVVDKIMNFDIIGI 81

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFF D+VSF+E+MAN GKI+++AALD TFQR  FNDIL LIPL+E V KL AVCM C
Sbjct: 82  DEGQFFKDIVSFSENMANMGKIIIIAALDSTFQRKEFNDILKLIPLSEKVTKLNAVCMEC 141

Query: 139 FRDAAFTKRIGQEKEVIL 156
           ++DAAF+KRI +EKE+ L
Sbjct: 142 YKDAAFSKRITKEKEIEL 159


>sp|Q9Q8N6|KITH_MYXVL Thymidine kinase OS=Myxoma virus (strain Lausanne) GN=TK PE=3 SV=1
          Length = 178

 Score =  168 bits (425), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G +  +I+GPMF+GK+TELIR ++RYQ A Y+C++V+Y KD RY    V THD   ++AV
Sbjct: 5   GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVKYEKDARYGN-GVRTHDNTCISAV 63

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
               L+ +   ++ ++VIGIDEGQF                                   
Sbjct: 64  PTASLDDVESISEHVEVIGIDEGQF----------------------------------- 88

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FP++VSF E MANAGK+++VAALDGTFQR  F +I  LIPLAE V KL 
Sbjct: 89  -----------FPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLN 137

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM C++DA+F+KR+G E E+ I
Sbjct: 138 AVCMYCYKDASFSKRLGNETEIEI 161



 Score =  161 bits (407), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 77/140 (55%), Positives = 104/140 (74%), Gaps = 2/140 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           R ++RYQ A Y+C++V+Y KD RY    V THD   ++AV    L+ +   ++ ++VIGI
Sbjct: 25  RLVKRYQIARYKCLVVKYEKDARYGN-GVRTHDNTCISAVPTASLDDVESISEHVEVIGI 83

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFP++VSF E MANAGK+++VAALDGTFQR  F +I  LIPLAE V KL AVCM C
Sbjct: 84  DEGQFFPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLNAVCMYC 143

Query: 139 FRDAAFTKRIGQEKEV-ILG 157
           ++DA+F+KR+G E E+ I+G
Sbjct: 144 YKDASFSKRLGNETEIEIIG 163


>sp|P28851|KITH_MYXVU Thymidine kinase OS=Myxoma virus (strain Uriarra) GN=TK PE=3 SV=1
          Length = 178

 Score =  167 bits (423), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/204 (43%), Positives = 118/204 (57%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G +  +I+GPMF+GK+TELIR ++RYQ A Y+C++V Y KD RY    V THD   ++AV
Sbjct: 5   GGQIHLIIGPMFAGKSTELIRLVKRYQIARYKCLVVNYEKDARYGN-GVRTHDNTCISAV 63

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
               L+ +   ++ ++VIGIDEGQF                                   
Sbjct: 64  PTASLDDVESISEHVEVIGIDEGQF----------------------------------- 88

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FP++VSF E MANAGK+++VAALDGTFQR  F +I  LIPLAE V KL 
Sbjct: 89  -----------FPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLN 137

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM C++DA+F+KR+G E E+ I
Sbjct: 138 AVCMYCYKDASFSKRLGNETEIEI 161



 Score =  160 bits (404), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/140 (55%), Positives = 103/140 (73%), Gaps = 2/140 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           R ++RYQ A Y+C++V Y KD RY    V THD   ++AV    L+ +   ++ ++VIGI
Sbjct: 25  RLVKRYQIARYKCLVVNYEKDARYGN-GVRTHDNTCISAVPTASLDDVESISEHVEVIGI 83

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFP++VSF E MANAGK+++VAALDGTFQR  F +I  LIPLAE V KL AVCM C
Sbjct: 84  DEGQFFPNIVSFCERMANAGKVLIVAALDGTFQRKPFTNICELIPLAENVTKLNAVCMYC 143

Query: 139 FRDAAFTKRIGQEKEV-ILG 157
           ++DA+F+KR+G E E+ I+G
Sbjct: 144 YKDASFSKRLGNETEIEIIG 163


>sp|P23335|KITH_SWPVK Thymidine kinase OS=Swinepox virus (strain Kasza) GN=TK PE=3 SV=1
          Length = 177

 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 115/200 (57%), Gaps = 46/200 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
            +ILGPMFSGK+TELIR + RYQ A Y C +++Y+KD+RY  + V THD+  ++AVS   
Sbjct: 7   HLILGPMFSGKSTELIRLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVSTDS 66

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           L  +     D+D++GIDEGQF                                       
Sbjct: 67  LFDIKDTLDDVDIVGIDEGQF--------------------------------------- 87

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
                  F D+V F E +AN GKIV+VAALDGT++R  F +IL+LIPL+E V KL A+CM
Sbjct: 88  -------FNDIVEFCEYIANKGKIVIVAALDGTYERKPFGNILNLIPLSEKVTKLNAICM 140

Query: 333 SCFRDAAFTKRIGQEKEVRI 352
            C RDA+F+KR+  EKE+ +
Sbjct: 141 ICHRDASFSKRLSDEKEIEL 160



 Score =  157 bits (397), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/138 (52%), Positives = 100/138 (72%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           R + RYQ A Y C +++Y+KD+RY  + V THD+  ++AVS   L  +     D+D++GI
Sbjct: 23  RLVNRYQIATYNCRVIKYSKDNRYGNDAVYTHDKCYISAVSTDSLFDIKDTLDDVDIVGI 82

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFF D+V F E +AN GKIV+VAALDGT++R  F +IL+LIPL+E V KL A+CM C
Sbjct: 83  DEGQFFNDIVEFCEYIANKGKIVIVAALDGTYERKPFGNILNLIPLSEKVTKLNAICMIC 142

Query: 139 FRDAAFTKRIGQEKEVIL 156
            RDA+F+KR+  EKE+ L
Sbjct: 143 HRDASFSKRLSDEKEIEL 160


>sp|P07605|KITH_RFVKA Thymidine kinase OS=Rabbit fibroma virus (strain Kasza) GN=TK PE=3
           SV=2
          Length = 178

 Score =  161 bits (407), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 117/204 (57%), Gaps = 47/204 (23%)

Query: 149 GQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAV 208
           G    +I+GPMF+GK+TELIR +RRYQ A ++C++V+Y KD RY    V THD   +TAV
Sbjct: 5   GGHIHLIIGPMFAGKSTELIRLVRRYQIAKHKCLVVKYEKDIRYGN-GVCTHDNMSITAV 63

Query: 209 SAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
               L+K+    ++ +VIGIDEGQF                                   
Sbjct: 64  CTPSLDKIDSVAENAEVIGIDEGQF----------------------------------- 88

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                      FP++ +F E MANAGK+++VAALDGTFQR  F++I  LIPLAE V KL 
Sbjct: 89  -----------FPNIATFCERMANAGKVLIVAALDGTFQRKPFSNISELIPLAENVTKLN 137

Query: 329 AVCMSCFRDAAFTKRIGQEKEVRI 352
           AVCM C+++ +F+KR+G + E+ +
Sbjct: 138 AVCMYCYKNGSFSKRLGDKMEIEV 161



 Score =  155 bits (393), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 100/136 (73%), Gaps = 1/136 (0%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           R +RRYQ A ++C++V+Y KD RY    V THD   +TAV    L+K+    ++ +VIGI
Sbjct: 25  RLVRRYQIAKHKCLVVKYEKDIRYGN-GVCTHDNMSITAVCTPSLDKIDSVAENAEVIGI 83

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFP++ +F E MANAGK+++VAALDGTFQR  F++I  LIPLAE V KL AVCM C
Sbjct: 84  DEGQFFPNIATFCERMANAGKVLIVAALDGTFQRKPFSNISELIPLAENVTKLNAVCMYC 143

Query: 139 FRDAAFTKRIGQEKEV 154
           +++ +F+KR+G + E+
Sbjct: 144 YKNGSFSKRLGDKMEI 159


>sp|Q90033|KITH_YMTV5 Thymidine kinase OS=Yaba monkey tumor virus (strain VR587) GN=TK
           PE=3 SV=1
          Length = 181

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 88/200 (44%), Positives = 114/200 (57%), Gaps = 47/200 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
            +ILGPMFSGK+TELIR ++RYQ A Y C++++Y+KD+RY    V THD   + A+    
Sbjct: 9   HIILGPMFSGKSTELIRLLKRYQVAMYTCLVIKYSKDERYGRGLV-THDNDSVPAIPVNS 67

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           LN++  +  + DVIGIDEGQF                                       
Sbjct: 68  LNEINCNDINADVIGIDEGQF--------------------------------------- 88

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 332
                  FPD+V F + MAN GKI++VAALDGTF R  F +IL+LIP AE V KLTAVCM
Sbjct: 89  -------FPDIVEFCDYMANNGKILIVAALDGTFLRQPFGNILNLIPRAEYVLKLTAVCM 141

Query: 333 SCFRDAAFTKRIGQEKEVRI 352
            CF  A+F+KRI  E+E+ I
Sbjct: 142 ICFGSASFSKRISDEQEIEI 161



 Score =  152 bits (383), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 1/136 (0%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           R ++RYQ A Y C++++Y+KD+RY    + THD   + A+    LN++  +  + DVIGI
Sbjct: 25  RLLKRYQVAMYTCLVIKYSKDERYG-RGLVTHDNDSVPAIPVNSLNEINCNDINADVIGI 83

Query: 79  DEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSC 138
           DEGQFFPD+V F + MAN GKI++VAALDGTF R  F +IL+LIP AE V KLTAVCM C
Sbjct: 84  DEGQFFPDIVEFCDYMANNGKILIVAALDGTFLRQPFGNILNLIPRAEYVLKLTAVCMIC 143

Query: 139 FRDAAFTKRIGQEKEV 154
           F  A+F+KRI  E+E+
Sbjct: 144 FGSASFSKRISDEQEI 159



 Score = 33.5 bits (75), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 13/24 (54%), Positives = 18/24 (75%)

Query: 228 IDEGQFVEVIGGSDKYMAVCRECY 251
           I + Q +E+IGG +KY +VCR CY
Sbjct: 153 ISDEQEIEIIGGKEKYQSVCRVCY 176


>sp|Q27564|KITH_DICDI Thymidine kinase 1 OS=Dictyostelium discoideum GN=thyB PE=1 SV=1
          Length = 227

 Score =  155 bits (391), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 50/210 (23%)

Query: 147 RIGQEKEVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY----DTEKVSTHDQ 202
           +I  + +VI GPMFSGKTTELIRRI+R+ +AN +C++++Y+KD RY    D   + THD+
Sbjct: 5   QIAGKIQVIFGPMFSGKTTELIRRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDK 64

Query: 203 QKLTAVSAVELNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPF 262
           Q   A     L  +    ++ DVIGIDEGQF                             
Sbjct: 65  QNYQAFPCSILEDVKEQAQNYDVIGIDEGQF----------------------------- 95

Query: 263 KTLANENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAE 322
                            FPDVV F+E +AN GK V++AALDGTFQR  F  ++ L+  AE
Sbjct: 96  -----------------FPDVVQFSEDLANQGKTVIIAALDGTFQRKPFQSVIDLVSKAE 138

Query: 323 CVEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
            + KLTAVCM C+ +AAF+KRI +  ++ +
Sbjct: 139 YITKLTAVCMVCYNEAAFSKRIVESDDIEL 168



 Score =  147 bits (371), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/142 (48%), Positives = 97/142 (68%), Gaps = 4/142 (2%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRY----DTEKVATHDQQKLTAVSAVELNKLIPHTKDID 74
           RRI+R+ +AN +C++++Y+KD RY    D   + THD+Q   A     L  +    ++ D
Sbjct: 27  RRIKRFNFANKKCLLIKYSKDTRYNDNIDKSFLVTHDKQNYQAFPCSILEDVKEQAQNYD 86

Query: 75  VIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           VIGIDEGQFFPDVV F+E +AN GK V++AALDGTFQR  F  ++ L+  AE + KLTAV
Sbjct: 87  VIGIDEGQFFPDVVQFSEDLANQGKTVIIAALDGTFQRKPFQSVIDLVSKAEYITKLTAV 146

Query: 135 CMSCFRDAAFTKRIGQEKEVIL 156
           CM C+ +AAF+KRI +  ++ L
Sbjct: 147 CMVCYNEAAFSKRIVESDDIEL 168


>sp|P10052|KITH_FOWPN Thymidine kinase OS=Fowlpox virus (strain NVSL) GN=TK PE=3 SV=1
          Length = 183

 Score =  143 bits (361), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 112/203 (55%), Gaps = 51/203 (25%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY---DTEKVSTHDQQKLTAVS 209
            VI GPMFSGKT+EL+RRI+R+  +N++C+I+++  D+RY   D  KV THD   + A +
Sbjct: 7   HVITGPMFSGKTSELVRRIKRFMLSNFKCIIIKHCGDNRYNEDDINKVYTHDLLFMEATA 66

Query: 210 AVELNKLIPHTKD--IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
           +  L+ L+P   +  + VIGIDE QF                                  
Sbjct: 67  SSNLSVLVPTLLNDGVQVIGIDEAQF---------------------------------- 92

Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
                       F D+V F+ESMAN GK V+VAAL+G F+R  F ++  L+ LAE V  L
Sbjct: 93  ------------FLDIVEFSESMANLGKTVIVAALNGDFKRELFGNVYKLLSLAETVSSL 140

Query: 328 TAVCMSCFRDAAFTKRIGQEKEV 350
           TA+C+ C+ DA+F+KR+ + KEV
Sbjct: 141 TAICVKCYCDASFSKRVTENKEV 163



 Score =  139 bits (351), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/142 (46%), Positives = 99/142 (69%), Gaps = 5/142 (3%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRY---DTEKVATHDQQKLTAVSAVELNKLIPHTKD--I 73
           RRI+R+  +N++C+I+++  D+RY   D  KV THD   + A ++  L+ L+P   +  +
Sbjct: 23  RRIKRFMLSNFKCIIIKHCGDNRYNEDDINKVYTHDLLFMEATASSNLSVLVPTLLNDGV 82

Query: 74  DVIGIDEGQFFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTA 133
            VIGIDE QFF D+V F+ESMAN GK V+VAAL+G F+R  F ++  L+ LAE V  LTA
Sbjct: 83  QVIGIDEAQFFLDIVEFSESMANLGKTVIVAALNGDFKRELFGNVYKLLSLAETVSSLTA 142

Query: 134 VCMSCFRDAAFTKRIGQEKEVI 155
           +C+ C+ DA+F+KR+ + KEV+
Sbjct: 143 ICVKCYCDASFSKRVTENKEVM 164



 Score = 32.3 bits (72), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 13/24 (54%), Positives = 18/24 (75%)

Query: 228 IDEGQFVEVIGGSDKYMAVCRECY 251
           + E + V  IGG DKY+AVCR+C+
Sbjct: 157 VTENKEVMDIGGKDKYIAVCRKCF 180


>sp|P28852|KITH_AMEPV Thymidine kinase OS=Amsacta moorei entomopoxvirus GN=TK PE=3 SV=1
          Length = 182

 Score =  107 bits (268), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 94/193 (48%), Gaps = 48/193 (24%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTA-VSAV 211
           E+I+GPMFSGKTTEL+R+I RY  +N +C+I+ +  D+R+  + +  HD   L      +
Sbjct: 4   ELIIGPMFSGKTTELMRKINRYILSNQKCVIITHNIDNRFINKNIINHDGNILNKEYLYI 63

Query: 212 ELNKLIPHTK---DIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
           + N LI       + D+IGIDE QF E                                E
Sbjct: 64  KTNNLINEINIVDNYDIIGIDECQFFE--------------------------------E 91

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
           N            D+  F + MAN  K V+VA L+  F R  FN I  LIP  E ++KL 
Sbjct: 92  N------------DLEQFCDKMANNKKKVIVAGLNCDFNRNIFNSISKLIPKVEKIKKLQ 139

Query: 329 AVCMSCFRDAAFT 341
           A+C  C++DA+FT
Sbjct: 140 AICQFCYKDASFT 152



 Score = 97.8 bits (242), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 6/143 (4%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTA-VSAVELNKLIPHTK---DID 74
           R+I RY  +N +C+I+ +  D+R+  + +  HD   L      ++ N LI       + D
Sbjct: 20  RKINRYILSNQKCVIITHNIDNRFINKNIINHDGNILNKEYLYIKTNNLINEINIVDNYD 79

Query: 75  VIGIDEGQFFP--DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
           +IGIDE QFF   D+  F + MAN  K V+VA L+  F R  FN I  LIP  E ++KL 
Sbjct: 80  IIGIDECQFFEENDLEQFCDKMANNKKKVIVAGLNCDFNRNIFNSISKLIPKVEKIKKLQ 139

Query: 133 AVCMSCFRDAAFTKRIGQEKEVI 155
           A+C  C++DA+FT +   + ++I
Sbjct: 140 AICQFCYKDASFTIKKHNKNQII 162


>sp|Q05880|KITH_CFEPV Thymidine kinase OS=Choristoneura fumiferana entomopoxvirus GN=TK
           PE=3 SV=1
          Length = 185

 Score =  107 bits (266), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 48/195 (24%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVS-THDQQKLTAVSAV 211
           E+I GPM+SGKTTELIRRI RY+     C+I+ ++ D+R+D + +   HD  K++    +
Sbjct: 4   EIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRHDDDNILINHDGFKISHDDFI 63

Query: 212 ELNKLIPHTKDID---VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANE 268
           + N LI   K  D   +IGIDE QF +                                 
Sbjct: 64  KTNILINKIKIFDKYEIIGIDECQFFDS-------------------------------- 91

Query: 269 NAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 328
                        D++ F +++AN GK ++VA L+  F +  F  I+ LIP++E + KL 
Sbjct: 92  ------------NDLIIFCDTLANNGKKIIVAGLNSDFNKNPFKSIIKLIPISEKITKLQ 139

Query: 329 AVCMSCFRDAAFTKR 343
           ++C  C+ DA FT +
Sbjct: 140 SICNFCYNDATFTMK 154



 Score = 98.6 bits (244), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 81/135 (60%), Gaps = 6/135 (4%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVA-THDQQKLTAVSAVELNKLIPHTKDID--- 74
           RRI RY+     C+I+ ++ D+R+D + +   HD  K++    ++ N LI   K  D   
Sbjct: 20  RRITRYKLCKKNCVIISHSIDNRHDDDNILINHDGFKISHDDFIKTNILINKIKIFDKYE 79

Query: 75  VIGIDEGQFFP--DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLT 132
           +IGIDE QFF   D++ F +++AN GK ++VA L+  F +  F  I+ LIP++E + KL 
Sbjct: 80  IIGIDECQFFDSNDLIIFCDTLANNGKKIIVAGLNSDFNKNPFKSIIKLIPISEKITKLQ 139

Query: 133 AVCMSCFRDAAFTKR 147
           ++C  C+ DA FT +
Sbjct: 140 SICNFCYNDATFTMK 154


>sp|P27158|KITH_RAT Thymidine kinase, cytosolic (Fragment) OS=Rattus norvegicus GN=Tk1
           PE=2 SV=1
          Length = 121

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 75/147 (51%), Gaps = 47/147 (31%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           +VILGPMFSGK+TEL+RR+RR+Q A Y+C++++YAKD RY +   STHD+  + A+ A  
Sbjct: 22  QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACM 80

Query: 213 LNKLIPHTKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAAL 272
           L  +      + VIGIDEGQF                                       
Sbjct: 81  LKDVAQEALGVAVIGIDEGQF--------------------------------------- 101

Query: 273 NVPPPPEFPDVVSFAESMANAGKIVVV 299
                  FPD+V F E+MAN GK V+V
Sbjct: 102 -------FPDIVDFCETMANTGKTVIV 121



 Score = 95.1 bits (235), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHTKDIDVIGI 78
           RR+RR+Q A Y+C++++YAKD RY +   +THD+  + A+ A  L  +      + VIGI
Sbjct: 38  RRVRRFQIAQYKCLVIKYAKDTRY-SNSFSTHDRNTMDALPACMLKDVAQEALGVAVIGI 96

Query: 79  DEGQFFPDVVSFAESMANAGKIVVV 103
           DEGQFFPD+V F E+MAN GK V+V
Sbjct: 97  DEGQFFPDIVDFCETMANTGKTVIV 121


>sp|Q05879|KITH_CBEPV Thymidine kinase OS=Choristoneura biennis entomopoxvirus GN=TK PE=3
           SV=1
          Length = 186

 Score =  101 bits (252), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 49/196 (25%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRY--DTEKVSTHDQQKLTAVSA 210
           E+I GPM+SGKTTELIRRI RY+     C+I+ ++ D+R   D   +  HD  K++    
Sbjct: 4   EIITGPMYSGKTTELIRRITRYKLCKKNCVIISHSIDNRCEEDDNILINHDGFKISHDDF 63

Query: 211 VELNKLIPHTKDID---VIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLAN 267
           ++ N LI   K  D   +IGIDE QF +                                
Sbjct: 64  IKTNILINKIKIFDKYEIIGIDECQFFDS------------------------------- 92

Query: 268 ENAALNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 327
                         D++ F +++AN GK ++VA L+  F +  F  I+ LIP++E + KL
Sbjct: 93  -------------NDLMIFCDTLANNGKKIIVAGLNSDFNKNPFKSIIKLIPISEKITKL 139

Query: 328 TAVCMSCFRDAAFTKR 343
            ++C  C+ DA FT +
Sbjct: 140 QSICNFCYNDATFTMK 155



 Score = 93.6 bits (231), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 79/136 (58%), Gaps = 7/136 (5%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRY--DTEKVATHDQQKLTAVSAVELNKLIPHTKDID-- 74
           RRI RY+     C+I+ ++ D+R   D   +  HD  K++    ++ N LI   K  D  
Sbjct: 20  RRITRYKLCKKNCVIISHSIDNRCEEDDNILINHDGFKISHDDFIKTNILINKIKIFDKY 79

Query: 75  -VIGIDEGQFFP--DVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKL 131
            +IGIDE QFF   D++ F +++AN GK ++VA L+  F +  F  I+ LIP++E + KL
Sbjct: 80  EIIGIDECQFFDSNDLMIFCDTLANNGKKIIVAGLNSDFNKNPFKSIIKLIPISEKITKL 139

Query: 132 TAVCMSCFRDAAFTKR 147
            ++C  C+ DA FT +
Sbjct: 140 QSICNFCYNDATFTMK 155


>sp|O81263|KITH_ORYSJ Thymidine kinase OS=Oryza sativa subsp. japonica GN=TK PE=2 SV=2
          Length = 271

 Score = 95.5 bits (236), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 96/209 (45%), Gaps = 53/209 (25%)

Query: 151 EKEVILGPMFSGKTTELIRRIRRYQYANYR-CMIVRYAKDDRYDTEKVSTHDQQKLTAVS 209
           E  VI+GPMF+GKTT L+RR++       R   +++  KD+RY  + V THD  K+   +
Sbjct: 68  EIHVIVGPMFAGKTTALLRRVQVEAGTGSRNVALIKSDKDNRYGLDSVVTHDGTKMPCWA 127

Query: 210 AVEL----NKLIPHTKD-IDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKT 264
             EL    +KL     D +DVIGIDE QF                               
Sbjct: 128 LPELSSFQDKLGTEAYDKVDVIGIDEAQF------------------------------- 156

Query: 265 LANENAALNVPPPPEFPDVVSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAEC 323
                          F D+  F    A+  GKIVVVA LDG ++R  F  +L +IPLA+ 
Sbjct: 157 ---------------FDDLHDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADS 201

Query: 324 VEKLTAVCMSCFRDAAFTKRIGQEKEVRI 352
           V KLTA C  C R A FT R  +E +  +
Sbjct: 202 VTKLTARCELCGRRAFFTLRKTRETKTEL 230



 Score = 94.0 bits (232), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 6/130 (4%)

Query: 33  IVRYAKDDRYDTEKVATHDQQKLTAVSAVEL----NKLIPHTKD-IDVIGIDEGQFFPDV 87
           +++  KD+RY  + V THD  K+   +  EL    +KL     D +DVIGIDE QFF D+
Sbjct: 101 LIKSDKDNRYGLDSVVTHDGTKMPCWALPELSSFQDKLGTEAYDKVDVIGIDEAQFFDDL 160

Query: 88  VSFAESMANA-GKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCMSCFRDAAFTK 146
             F    A+  GKIVVVA LDG ++R  F  +L +IPLA+ V KLTA C  C R A FT 
Sbjct: 161 HDFCCKAADRDGKIVVVAGLDGDYKRNKFGSVLDIIPLADSVTKLTARCELCGRRAFFTL 220

Query: 147 RIGQEKEVIL 156
           R  +E +  L
Sbjct: 221 RKTRETKTEL 230


>sp|B7IQY3|KITH_BACC2 Thymidine kinase OS=Bacillus cereus (strain G9842) GN=tdk PE=3 SV=1
          Length = 195

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+D+DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEDMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+D+DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEDMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|Q8CRM9|KITH_STAES Thymidine kinase OS=Staphylococcus epidermidis (strain ATCC 12228)
           GN=tdk PE=3 SV=1
          Length = 199

 Score = 92.8 bits (229), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+  ++ A++   
Sbjct: 11  ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70

Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
             +++ H  ++++VIGIDE QF E                                    
Sbjct: 71  AQEILNHKLEEVNVIGIDEVQFFE------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V+  E +A  G  V+VA LD  F+   F  +  L+ ++E + KL AVC
Sbjct: 95  ---------DDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
             C   ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158



 Score = 90.5 bits (223), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+  ++ A++     +++ H  ++++V
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +V+  E +A  G  V+VA LD  F+   F  +  L+ ++E + KL AV
Sbjct: 85  IGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158


>sp|Q5HMA3|KITH_STAEQ Thymidine kinase OS=Staphylococcus epidermidis (strain ATCC 35984 /
           RP62A) GN=tdk PE=3 SV=1
          Length = 199

 Score = 92.8 bits (229), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+  ++ A++   
Sbjct: 11  ETITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINIST 70

Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
             +++ H  ++++VIGIDE QF E                                    
Sbjct: 71  AQEILNHKLEEVNVIGIDEVQFFE------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V+  E +A  G  V+VA LD  F+   F  +  L+ ++E + KL AVC
Sbjct: 95  ---------DDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
             C   ++ T+R+
Sbjct: 146 SVCGSPSSRTQRL 158



 Score = 90.5 bits (223), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+  ++ A++     +++ H  ++++V
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNEIEAINISTAQEILNHKLEEVNV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +V+  E +A  G  V+VA LD  F+   F  +  L+ ++E + KL AV
Sbjct: 85  IGIDEVQFFEDDIVNIVEKLAENGHRVIVAGLDMDFRGEPFKPMPKLLAVSEHITKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CSVCGSPSSRTQRL 158


>sp|Q630R8|KITH_BACCZ Thymidine kinase OS=Bacillus cereus (strain ZK / E33L) GN=tdk PE=3
           SV=1
          Length = 195

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFKHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|Q81JX0|KITH_BACAN Thymidine kinase OS=Bacillus anthracis GN=tdk PE=1 SV=1
          Length = 194

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFKHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|C3LFK4|KITH_BACAC Thymidine kinase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495)
           GN=tdk PE=3 SV=1
          Length = 194

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFKHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|C3P292|KITH_BACAA Thymidine kinase OS=Bacillus anthracis (strain A0248) GN=tdk PE=3
           SV=1
          Length = 194

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFKHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|Q72XC1|KITH_BACC1 Thymidine kinase OS=Bacillus cereus (strain ATCC 10987) GN=tdk PE=3
           SV=1
          Length = 195

 Score = 92.4 bits (228), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|B7JHF2|KITH_BACC0 Thymidine kinase OS=Bacillus cereus (strain AH820) GN=tdk PE=3 SV=1
          Length = 194

 Score = 92.4 bits (228), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|Q6HAV3|KITH_BACHK Thymidine kinase OS=Bacillus thuringiensis subsp. konkukian (strain
           97-27) GN=tdk PE=3 SV=1
          Length = 195

 Score = 92.4 bits (228), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|B9IRW3|KITH_BACCQ Thymidine kinase OS=Bacillus cereus (strain Q1) GN=tdk PE=3 SV=1
          Length = 195

 Score = 92.4 bits (228), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|B7HY90|KITH_BACC7 Thymidine kinase OS=Bacillus cereus (strain AH187) GN=tdk PE=3 SV=1
          Length = 195

 Score = 92.4 bits (228), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|A0RLB6|KITH_BACAH Thymidine kinase OS=Bacillus thuringiensis (strain Al Hakam) GN=tdk
           PE=3 SV=1
          Length = 195

 Score = 92.4 bits (228), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|C1F0Q7|KITH_BACC3 Thymidine kinase OS=Bacillus cereus (strain 03BB102) GN=tdk PE=3
           SV=1
          Length = 195

 Score = 92.4 bits (228), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 89/193 (46%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
            +C   A+ T+R+
Sbjct: 146 SACGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
           +C   A+ T+R+
Sbjct: 147 ACGSPASRTQRL 158


>sp|A9VSC8|KITH_BACWK Thymidine kinase OS=Bacillus weihenstephanensis (strain KBAB4)
           GN=tdk PE=3 SV=1
          Length = 194

 Score = 92.0 bits (227), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRRIRR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFNHVTEEMDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
             C   A+ T+R+
Sbjct: 146 SECGSPASRTQRL 158



 Score = 89.4 bits (220), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RRIRR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRIRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFNHVTEEMDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
            C   A+ T+R+
Sbjct: 147 ECGSPASRTQRL 158


>sp|P65231|KITH_STAAN Thymidine kinase OS=Staphylococcus aureus (strain N315) GN=tdk PE=1
           SV=1
          Length = 199

 Score = 91.7 bits (226), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  +
Sbjct: 11  ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70

Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
            ++++ H   ++DVIGIDE QF +                                    
Sbjct: 71  ASEIMTHNLTNVDVIGIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     ++VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AVC
Sbjct: 95  ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145

Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
             C   ++ T+R+   K  +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167



 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  + ++++ H   ++DV
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AV
Sbjct: 85  IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158


>sp|P65230|KITH_STAAM Thymidine kinase OS=Staphylococcus aureus (strain Mu50 / ATCC
           700699) GN=tdk PE=3 SV=1
          Length = 199

 Score = 91.7 bits (226), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  +
Sbjct: 11  ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70

Query: 213 LNKLIPHT-KDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
            ++++ H   ++DVIGIDE QF +                                    
Sbjct: 71  ASEIMTHNLTNVDVIGIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     ++VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AVC
Sbjct: 95  ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145

Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
             C   ++ T+R+   K  +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167



 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPHT-KDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  + ++++ H   ++DV
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AV
Sbjct: 85  IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158


>sp|Q814U0|KITH_BACCR Thymidine kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31)
           GN=tdk PE=1 SV=1
          Length = 195

 Score = 91.7 bits (226), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
             C   A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158



 Score = 88.6 bits (218), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
            C   A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158


>sp|B7HFM8|KITH_BACC4 Thymidine kinase OS=Bacillus cereus (strain B4264) GN=tdk PE=3 SV=1
          Length = 195

 Score = 91.7 bits (226), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 46/193 (23%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           EVI G MFSGK+ ELIRR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV    
Sbjct: 11  EVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
              +  H T+++DVI IDE QF +                                    
Sbjct: 71  SKDIFEHITEELDVIAIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC
Sbjct: 95  ---------GDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVC 145

Query: 332 MSCFRDAAFTKRI 344
             C   A+ T+R+
Sbjct: 146 SVCGSPASRTQRL 158



 Score = 88.6 bits (218), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 2/132 (1%)

Query: 19  RRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDVIG 77
           RR+RR Q+A    ++ +   D+RY  E V +H+  K+ AV       +  H T+++DVI 
Sbjct: 27  RRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHITEELDVIA 86

Query: 78  IDEGQFF-PDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVCM 136
           IDE QFF  D+V   + +AN G  V+VA LD  F+   F  +  L+ +AE V KL AVC 
Sbjct: 87  IDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQAVCS 146

Query: 137 SCFRDAAFTKRI 148
            C   A+ T+R+
Sbjct: 147 VCGSPASRTQRL 158


>sp|Q8NVG5|KITH_STAAW Thymidine kinase OS=Staphylococcus aureus (strain MW2) GN=tdk PE=3
           SV=1
          Length = 199

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  +
Sbjct: 11  ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
            ++++ H   ++DVIGIDE QF +                                    
Sbjct: 71  ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     ++VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AVC
Sbjct: 95  ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145

Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
             C   ++ T+R+   K  +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167



 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  + ++++ H   ++DV
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AV
Sbjct: 85  IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158


>sp|Q6G7J1|KITH_STAAS Thymidine kinase OS=Staphylococcus aureus (strain MSSA476) GN=tdk
           PE=3 SV=1
          Length = 199

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  +
Sbjct: 11  ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
            ++++ H   ++DVIGIDE QF +                                    
Sbjct: 71  ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     ++VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AVC
Sbjct: 95  ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145

Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
             C   ++ T+R+   K  +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167



 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  + ++++ H   ++DV
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AV
Sbjct: 85  IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158


>sp|Q6GEV6|KITH_STAAR Thymidine kinase OS=Staphylococcus aureus (strain MRSA252) GN=tdk
           PE=3 SV=1
          Length = 199

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  +
Sbjct: 11  ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
            ++++ H   ++DVIGIDE QF +                                    
Sbjct: 71  ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     ++VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AVC
Sbjct: 95  ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145

Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
             C   ++ T+R+   K  +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167



 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  + ++++ H   ++DV
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AV
Sbjct: 85  IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158


>sp|Q5HE81|KITH_STAAC Thymidine kinase OS=Staphylococcus aureus (strain COL) GN=tdk PE=3
           SV=1
          Length = 199

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  +
Sbjct: 11  ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
            ++++ H   ++DVIGIDE QF +                                    
Sbjct: 71  ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     ++VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AVC
Sbjct: 95  ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145

Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
             C   ++ T+R+   K  +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167



 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  + ++++ H   ++DV
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AV
Sbjct: 85  IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158


>sp|Q2YUN4|KITH_STAAB Thymidine kinase OS=Staphylococcus aureus (strain bovine RF122 /
           ET3-1) GN=tdk PE=3 SV=1
          Length = 199

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  +
Sbjct: 11  ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
            ++++ H   ++DVIGIDE QF +                                    
Sbjct: 71  ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     ++VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AVC
Sbjct: 95  ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145

Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
             C   ++ T+R+   K  +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167



 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  + ++++ H   ++DV
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AV
Sbjct: 85  IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158


>sp|Q2FF09|KITH_STAA3 Thymidine kinase OS=Staphylococcus aureus (strain USA300) GN=tdk
           PE=3 SV=1
          Length = 199

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 46/202 (22%)

Query: 153 EVILGPMFSGKTTELIRRIRRYQYANYRCMIVRYAKDDRYDTEKVSTHDQQKLTAVSAVE 212
           E I G MFSGK+ ELIRR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  +
Sbjct: 11  ECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK 70

Query: 213 LNKLIPH-TKDIDVIGIDEGQFVEVIGGSDKYMAVCRECYKQKAPIKRSPFKTLANENAA 271
            ++++ H   ++DVIGIDE QF +                                    
Sbjct: 71  ASEIMTHDLTNVDVIGIDEVQFFD------------------------------------ 94

Query: 272 LNVPPPPEFPDVVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAVC 331
                     ++VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AVC
Sbjct: 95  ---------DEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVC 145

Query: 332 MSCFRDAAFTKRIGQEKEVRIE 353
             C   ++ T+R+   K  +I+
Sbjct: 146 AVCGSSSSRTQRLINGKPAKID 167



 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 17  FCRRIRRYQYANYRCMIVRYAKDDRYDTEKVATHDQQKLTAVSAVELNKLIPH-TKDIDV 75
             RR+RR  YA  + ++ + A DDRY  EKV +H+   + A++  + ++++ H   ++DV
Sbjct: 25  LIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHDLTNVDV 84

Query: 76  IGIDEGQFFPD-VVSFAESMANAGKIVVVAALDGTFQRTGFNDILSLIPLAECVEKLTAV 134
           IGIDE QFF D +VS  E ++  G  V+VA LD  F+   F  +  L+ ++E V KL AV
Sbjct: 85  IGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAV 144

Query: 135 CMSCFRDAAFTKRI 148
           C  C   ++ T+R+
Sbjct: 145 CAVCGSSSSRTQRL 158


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.137    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 128,784,429
Number of Sequences: 539616
Number of extensions: 5373057
Number of successful extensions: 16508
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 15721
Number of HSP's gapped (non-prelim): 545
length of query: 353
length of database: 191,569,459
effective HSP length: 118
effective length of query: 235
effective length of database: 127,894,771
effective search space: 30055271185
effective search space used: 30055271185
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)