RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8466
(431 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 137 bits (349), Expect = 6e-39
Identities = 70/182 (38%), Positives = 85/182 (46%), Gaps = 6/182 (3%)
Query: 208 FSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTK 265
S L G K C C K FS +L EH + H G K KC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 266 SYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLT 323
LT H + H G K KC C K FS ++ L H + H G K C C K FS+ ++L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 324 EHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRK 381
H + H G K KC C K FS + NL H H G + YKC C K FS + L H++
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 382 LH 383
H
Sbjct: 183 TH 184
Score = 134 bits (341), Expect = 7e-38
Identities = 72/184 (39%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 181 FSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTK 238
S A L G K C C K FS +L EH + H G K KC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 239 SYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLT 296
LT H + H G K KC C K FS ++ L H + H G K C C K FS ++L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 297 EHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMN 354
H + H G K KC C K FSR+ L H + H G K KC C K FS + L H
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 355 LHQG 358
H G
Sbjct: 183 THTG 186
Score = 129 bits (328), Expect = 5e-36
Identities = 69/184 (37%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 235 FSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTK 292
S L G K C C K FS +L EH + H G K KC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 293 SYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLT 350
LT H + H G K KC C K FS+++ L H + H G K C C K FS ++L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMK 408
H H G + YKC C K FS + +L H++ H K KC C K FS + L H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 409 LHQG 412
H G
Sbjct: 183 THTG 186
Score = 126 bits (320), Expect = 9e-35
Identities = 70/178 (39%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMK 219
L G + Y C C K FS +L H + H G K KC C K FS K LT H +
Sbjct: 11 AQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR 70
Query: 220 LHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQG 277
H G K KC C K FS ++ L H + H G K C C K FS ++L H + H G
Sbjct: 71 THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG 130
Query: 278 IK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
K KC C K FS + L H + H G K KC C K FSR+ L H + H G K
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188
Score = 126 bits (318), Expect = 1e-34
Identities = 68/176 (38%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 262 FSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRK 319
S L G K C C K FS +L EH + H G K KC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 320 SYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLT 377
LT H + H G K KC C K FS ++NL H H G + Y C C K FS HL
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 378 EHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
H++ H K KC C K FS + L H + H G YKC C K FS + L
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALN 178
Score = 72.1 bits (178), Expect = 5e-15
Identities = 41/111 (36%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCD 202
YKC E H + H G + Y C C K FS ++L AH + H G K KC
Sbjct: 78 YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137
Query: 203 LCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
C K FS + L H + H G K KC C K FS + L H + H G K
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 120 bits (302), Expect = 3e-32
Identities = 56/188 (29%), Positives = 73/188 (38%), Gaps = 19/188 (10%)
Query: 162 KHMKLHQGVR-YKCDL--CSKKFSTKSYLTAHMKLHQGLK-NKCD--LCSKEFSSKSYLT 215
L + Y C C ++ L AH+ H G K C C K F+S +LT
Sbjct: 2 GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61
Query: 216 EHMKLHQGIKN-KCD--LCSKEFSTKSYLTEHMKLHQGIKN---KCDL--CSKEFSTKSY 267
H H G KN CD C F+TK+ + +H IK C C K F +
Sbjct: 62 RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121
Query: 268 LTEHMKLHQGIKN-KC--DLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLT 323
L H H +C + C K FS S L H K+H G K D CS +
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181
Query: 324 EHMK-LHQ 330
+H+ HQ
Sbjct: 182 KHVAECHQ 189
Score = 117 bits (295), Expect = 3e-31
Identities = 53/188 (28%), Positives = 72/188 (38%), Gaps = 19/188 (10%)
Query: 217 HMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTE 270
L K C C ++ L H+ H G K C C K F++ +LT
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 271 HMKLHQGIKN-KCD--LCSKEFSTKSYLTEHMKLHQGLKN---KCDL--CSKEFSRKSYL 322
H H G KN CD C F+TK+ + +H +K C C K F + + L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 323 TEHMKLHQGIKN-KC--DLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTE 378
H H +C + C K FS S L +H +H G K D CS +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182
Query: 379 H-RKLHQD 385
H + HQD
Sbjct: 183 HVAECHQD 190
Score = 111 bits (281), Expect = 3e-29
Identities = 52/187 (27%), Positives = 70/187 (37%), Gaps = 19/187 (10%)
Query: 244 HMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTE 297
L K C C ++ L H+ H G K C C K F++ +LT
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 298 HMKLHQGLKN-KCD--LCSKEFSRKSYLTEHMKLHQGIKN---KCDL--CSKEFSHKSNL 349
H H G KN CD C F+ K+ + +H IK C C K F + L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 350 TKHMNLHQGIR-YKC--DLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTE 405
H H Y+C + C K FS L H K+H K D CS + + +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182
Query: 406 HMK-LHQ 411
H+ HQ
Sbjct: 183 HVAECHQ 189
Score = 105 bits (264), Expect = 8e-27
Identities = 51/179 (28%), Positives = 65/179 (36%), Gaps = 18/179 (10%)
Query: 271 HMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGLK-NKCD--LCSKEFSRKSYLTE 324
L K C C ++ L H+ H G K C C K F+ +LT
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 325 HMKLHQGIKN-KCD--LCSKEFSHKSNLTKHMNLHQGIR---YKCDL--CSKEFSWKGHL 376
H H G KN CD C F+ K+N+ KH N I+ Y C C K F L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 377 TEHRKLHQDIKN-KC--DLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
H+ H +C + C K FS L H K+H G K CS +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181
Score = 83.8 bits (208), Expect = 4e-19
Identities = 39/147 (26%), Positives = 56/147 (38%), Gaps = 27/147 (18%)
Query: 157 YKCQE--------------KHMKLHQGVR-YKCD--LCSKKFSTKSYLTAHMKLHQGLKN 199
+ C+E +H H G + + CD C +F+TK+ + H +K
Sbjct: 43 FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI 102
Query: 200 ---KCDL--CSKEFSSKSYLTEHMKLHQGIKN-KC--DLCSKEFSTKSYLTEHMKLHQGI 251
C C K F + L H H +C + C K FS S L H K+H G
Sbjct: 103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 162
Query: 252 KN-KCDLCSKEFSTKSYLTEHMK-LHQ 276
K D CS T + +H+ HQ
Sbjct: 163 PCKKDDSCSFVGKTWTLYLKHVAECHQ 189
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 99 bits (250), Expect = 2e-25
Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 254 KCDLCSKEFSTKSYLTEHMK---LHQGIKN------KCDLCSKEFSTKSYLTEHMKLHQG 304
+ D CS+EF ++ L H+ +H K C + F + L HM+ H G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 305 LK-NKCDL--CSKEFSRKSYLTEHMKLHQGIK-NKC--DLCSKEFSHKSNLTKHMN-LHQ 357
K +KC C K +SR L H++ H G K C + CSK FS+ S+ KH N H
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 358 GIR-YKCDL--CSKEFSWKGHLTEHRKLH 383
+ Y C L C+K ++ L +H K
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 98.0 bits (245), Expect = 2e-24
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 19/151 (12%)
Query: 227 KCDLCSKEFSTKSYLTEHMK---LHQGIKN------KCDLCSKEFSTKSYLTEHMKLHQG 277
+ D CS+EF ++ L H+ +H K C + F + L HM+ H G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 278 IK-NKCDL--CSKEFSTKSYLTEHMKLHQGLK-NKC--DLCSKEFSRKSYLTEHMK-LHQ 330
K +KC C K +S L H++ H G K C + CSK FS S +H H
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 331 GIK-NKCDL--CSKEFSHKSNLTKHMNLHQG 358
K C L C+K ++ S+L KH+ G
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 96.9 bits (242), Expect = 4e-24
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 172 YKCDLCSKKFSTKSYLTAHMK---LHQGLKN------KCDLCSKEFSSKSYLTEHMKLHQ 222
+ D CS++F ++ L H+ +H K C + F ++ L HM+ H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 223 GIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK-NKC--DLCSKEFSTKSYLTEHMK-LH 275
G K +KC C K +S L H++ H G K C + CSK FS S +H H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 276 QGIK-NKCDL--CSKEFSTKSYLTEHMKLHQG 304
K C L C+K ++ S L +H+K G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 92.7 bits (231), Expect = 1e-22
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 281 KCDLCSKEFSTKSYLTEHMK---LHQGLKN------KCDLCSKEFSRKSYLTEHMKLHQG 331
+ D CS+EF ++ L H+ +H K C + F + L HM+ H G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 332 IK-NKCDL--CSKEFSHKSNLTKHMNLHQGIR-YKC--DLCSKEFSWKGHLTEH-RKLHQ 384
K +KC C K +S NL H+ H G + Y C + CSK FS +H + H
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 385 DIK-NKCDL--CSKEFSSKRILTEHMKLHQG 412
+ K C L C+K ++ L +H+K G
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 50.3 bits (121), Expect = 9e-08
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 361 YKCDLCSKEFSWKGHLTEH-RKLHQDIKNK--------CDLCSKEFSSKRILTEHMKLHQ 411
+ D CS+EF + L H H + K C + F ++ +L HM+ H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 412 GIT-YKCGL--CSKEFSCKSNLT 431
G +KC C K +S NL
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLK 86
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 92.3 bits (230), Expect = 1e-22
Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 17/143 (11%)
Query: 258 CSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK---------- 306
+ + C + FST L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 307 NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHMNLHQGIR-YK 362
+C K F K L H+++H G K C C K F+ NL H H G + +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 363 CDL--CSKEFSWKGHLTEHRKLH 383
C+ C + F+ +H +H
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVH 145
Score = 84.6 bits (210), Expect = 1e-19
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 17/134 (12%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK----------NKCDLCSKEFSSK 211
+ + C + FST L H+ + +C K F +K
Sbjct: 16 CKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAK 75
Query: 212 SYLTEHMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCDL--CSKEFSTK 265
L H+++H G K C C K F+ L H + H G K KC+ C + F+
Sbjct: 76 YKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANS 135
Query: 266 SYLTEHMKLHQGIK 279
S +HM +H K
Sbjct: 136 SDRKKHMHVHTSDK 149
Score = 82.3 bits (204), Expect = 6e-19
Identities = 28/145 (19%), Positives = 48/145 (33%), Gaps = 17/145 (11%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK---------- 333
+ + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 334 NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSWKGHLTEHRKLHQDIK-NK 389
+C K F K L H+ +H G + + C C K F+ +L H++ H K K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 390 CDL--CSKEFSSKRILTEHMKLHQG 412
C+ C + F++ +HM +H
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTS 147
Score = 75.0 bits (185), Expect = 2e-16
Identities = 26/137 (18%), Positives = 40/137 (29%), Gaps = 17/137 (12%)
Query: 312 CSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG----------IR 360
+ + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLHQGIT-YK 416
+C K F K L H ++H K C C K F+ L H + H G +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 417 CGL--CSKEFSCKSNLT 431
C C + F+ S+
Sbjct: 123 CEFEGCDRRFANSSDRK 139
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 90.7 bits (226), Expect = 2e-22
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 227 KCD--LCSKEFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGIK-N 280
C C+K + S+L H + H G K +CD C + FS L H + H G+K
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSRKSYLTEHMKLH 329
+C C ++FS +L H + H G K C C K+F+R L H +H
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 87.6 bits (218), Expect = 4e-21
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 308 KCD--LCSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-Y 361
C C+K + + S+L H + H G K +CD C + FS L +H H G++ +
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 362 KCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLH 410
+C C ++FS HL H + H K C C K+F+ L H +H
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 76.8 bits (190), Expect = 2e-17
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 335 KCD--LCSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSWKGHLTEHRKLHQDIK-N 388
C C+K + S+L H H G + Y+CD C + FS L H++ H +K
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGL--CSKEFSCKSNLT 431
+C C ++FS L H + H G + C C K+F+ L
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV 113
Score = 76.4 bits (189), Expect = 3e-17
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 21/113 (18%)
Query: 157 YKCQE--------------KHMKLHQGVR-YKCDL--CSKKFSTKSYLTAHMKLHQGLK- 198
+ C H + H G + Y+CD C ++FS L H + H G+K
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 199 NKCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLH 248
+C C ++FS +L H + H G K C C K+F+ L H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 89.1 bits (222), Expect = 1e-21
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKL---HQGIKN-K 335
+C C K+F +K YL H + H G K +C C K + RK L EH ++ +
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEH 379
C +C + F + L HM H G YKC CS++F K L H
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 87.9 bits (219), Expect = 2e-21
Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKL---HQGIKN- 226
+C C KKF +K YL H + H G K +C C K + K L EH ++ +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHM-KLHQGIK 279
C +C + F + L HM H G KC CS++F K L HM KLH G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 82.6 bits (205), Expect = 2e-19
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHM---NLHQGIR-YK 362
+C C K+F K YL H + H G K +C C K + K NL +H +++ + +
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 363 CDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHM-KLHQG 412
C +C + F + L H H KC CS++F K+ L HM KLH G
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 54.8 bits (133), Expect = 1e-09
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT----Y 415
+C C K+F K +L H + H K +C C K + K L EH + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 416 KCGLCSKEFSCKSNLT 431
C +C + F + L
Sbjct: 68 TCSVCQETFRRRMELR 83
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 84.4 bits (210), Expect = 3e-20
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDL 338
C C K F+ KS HM +H GL+ C +C K+F K +L HMK+H GIK +C++
Sbjct: 12 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLT 377
C+K F + + +H+ + Y+ + + +
Sbjct: 71 CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 75.9 bits (188), Expect = 4e-17
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDL 392
C C K F+HKS +HM++H G+R Y C +C K+F K HL H K+H IK +C++
Sbjct: 12 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70
Query: 393 CSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
C+K F + H+ +Y+ + + S +
Sbjct: 71 CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 74.8 bits (185), Expect = 1e-16
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDL 257
C C K F+ KS HM +H G++ C +C K+F K +L HMK+H GIK +C++
Sbjct: 12 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70
Query: 258 CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLT 296
C+K F + H+ K+ + + + S +
Sbjct: 71 CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 63.6 bits (156), Expect = 7e-13
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 157 YKCQ-----------EKHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDL 203
Y CQ ++HM +H G+R Y C +C KKF K +L HMK+H G+K +C++
Sbjct: 11 YPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70
Query: 204 CSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLT 242
C+K F + H+ K+ + + + S +
Sbjct: 71 CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 26.6 bits (60), Expect = 6.3
Identities = 6/44 (13%), Positives = 13/44 (29%), Gaps = 11/44 (25%)
Query: 157 YKCQE------KHMKLHQGVR-----YKCDLCSKKFSTKSYLTA 189
Y+C H+ V Y+ + + S ++
Sbjct: 66 YECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEASGPSS 109
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 83.6 bits (208), Expect = 6e-20
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
Query: 265 KSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYL 322
S + + K C C + F+ L H + H + CD+C K F R+ +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 323 TEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
+H +H K KC C K F L H LH
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 77.5 bits (192), Expect = 9e-18
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 3/99 (3%)
Query: 184 KSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYL 241
S + + K C C + F+ L H + H + CD+C K F + +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 242 TEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
+H +H K KC C K F L H LH
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100
Score = 77.1 bits (191), Expect = 1e-17
Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Query: 319 KSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHL 376
S + + K C C + F+ NL H H R Y CD+C K F + HL
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 377 TEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+HR +H K KC C K F R L H LH +
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 74.8 bits (185), Expect = 8e-17
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
+ + + C C + F+ L H + H + CD+C K F + +L +H
Sbjct: 7 GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66
Query: 220 LHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
+H K KC C K F L H LH
Sbjct: 67 IHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100
Score = 68.2 bits (168), Expect = 1e-14
Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 346 KSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRIL 403
S + + + + C C + F+ +L H + H D + CD+C K F + L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 404 TEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
+H +H +KC C K F L
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLA 90
Score = 37.0 bits (87), Expect = 0.002
Identities = 13/55 (23%), Positives = 16/55 (29%), Gaps = 13/55 (23%)
Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
Y C H +H + +KC C K F L H LH
Sbjct: 46 YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 84.1 bits (209), Expect = 6e-20
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 254 KCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKC 309
C C+K F S + +H+ H G + + C C K F S L H +H G K +C
Sbjct: 7 ACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 310 DL--CSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHMNLHQG 358
C K FS L H+++H G + C C+K+F+ +NL H+ H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 82.9 bits (206), Expect = 1e-19
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 227 KCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKC 282
C C+K F S + +H+ H G + + C C K F S L H +H G K +C
Sbjct: 7 ACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 283 DL--CSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSRKSYLTEHMKLHQGIK 333
C K FS L H+++H G + C C+K+F++ + L H+ H K
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Score = 76.8 bits (190), Expect = 2e-17
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 308 KCDL--CSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
C C+K F S + +H+ H G + + C C K F S L +H +H G + ++C
Sbjct: 7 ACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 364 DL--CSKEFSWKGHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLHQG 412
C K FS +L H ++H + C C+K+F+ L H+ H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 71.0 bits (175), Expect = 2e-15
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDL--CSKEFSSKSYLTEH 217
KH+ H G R + C C K F S L H +H G K +C C K FS L H
Sbjct: 25 KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH 83
Query: 218 MKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK 252
+++H G + C C+K+F+ + L H+ H K
Sbjct: 84 VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Score = 55.6 bits (135), Expect = 7e-10
Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 361 YKCDL--CSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
C C+K F + +H H + C C K F L H +H G ++C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 418 GL--CSKEFSCKSNLT 431
C K FS NL
Sbjct: 66 TFEGCGKRFSLDFNLR 81
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 81.3 bits (202), Expect = 3e-19
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL 365
KC++C K FSRK L HM+ H G+K KC C + S+L KH+ +H R +KC +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 366 CSKEFSWKGHLTEHRKLH 383
C LT H + H
Sbjct: 70 CPYASRNSSQLTVHLRSH 87
Score = 77.8 bits (193), Expect = 5e-18
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCD 229
+KC++C K FS K L HM+ H G+K KC C + S L +H+++H + KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 230 LCSKEFSTKSYLTEHMKLHQGIK 252
+C S LT H++ H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDS 91
Score = 75.9 bits (188), Expect = 2e-17
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDL 311
KC++C K FS K L HM+ H G+K KC C + S L +H+++H + KC +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 312 CSKEFSRKSYLTEHMKLHQGIK 333
C S LT H++ H G
Sbjct: 70 CPYASRNSSQLTVHLRSHTGDS 91
Score = 74.8 bits (185), Expect = 6e-17
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL 392
KC++C K FS K L HM H G++ YKC C + L +H ++H D + KC +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 393 CSKEFSSKRILTEHMKLHQG-ITYKCG 418
C + LT H++ H G G
Sbjct: 70 CPYASRNSSQLTVHLRSHTGDSGPSSG 96
Score = 63.6 bits (156), Expect = 6e-13
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQGIT-YKCG 418
+KC++C K FS K L H + H +K KC C + L +H+++H +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 419 LCSKEFSCKSNLT 431
+C S LT
Sbjct: 69 ICPYASRNSSQLT 81
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 79.8 bits (198), Expect = 9e-19
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLC 366
+C +C + FSR +LT H++ H G K CD+C ++F+ +H ++ + D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 367 SKEFSWKGHLTEHRK 381
+ S HL
Sbjct: 65 EELLSKNYHLENEVA 79
Score = 73.3 bits (181), Expect = 2e-16
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLC 339
+C +C + FS +LT H++ H G K CD+C ++F+R H + + D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 340 SKEFSHKSNLTKHM 353
+ S +L +
Sbjct: 65 EELLSKNYHLENEV 78
Score = 72.1 bits (178), Expect = 4e-16
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLC 312
+C +C + FS +LT H++ H G K CD+C ++F+ H + L D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 313 SKEFSRKSYLTEHMK 327
+ S+ +L +
Sbjct: 65 EELLSKNYHLENEVA 79
Score = 72.1 bits (178), Expect = 5e-16
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDL 230
++C +C + FS +LT H++ H G K CD+C ++F+ H + + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 231 CSKEFSTKSYLTEHMK 246
+ S +L +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 71.0 bits (175), Expect = 1e-15
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLC 393
+C +C + FS +LT H+ H G + + CD+C ++F+ HR + + D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 394 SKEFSSKRILTEHMK 408
+ S L +
Sbjct: 65 EELLSKNYHLENEVA 79
Score = 64.4 bits (158), Expect = 2e-13
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGITYKCGL 419
++C +C + FS HLT H + H K CD+C ++F+ H + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 420 CSKEFSCKSNLT 431
+ S +L
Sbjct: 64 VEELLSKNYHLE 75
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 79.4 bits (197), Expect = 1e-18
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 308 KCDL--CSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
C + C + FS+ LT H+++H G K +C +C + FS +LT H+ H G + + C
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 364 DLCSKEFSWKGHLTEHRKLH 383
D+C ++F+ H K+H
Sbjct: 66 DICGRKFARSDERKRHTKIH 85
Score = 79.0 bits (196), Expect = 1e-18
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 172 YKCDL--CSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK-NK 227
Y C + C ++FS LT H+++H G K +C +C + FS +LT H++ H G K
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 228 CDLCSKEFSTKSYLTEHMKLHQGIKN 253
CD+C ++F+ H K+H K+
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQKD 90
Score = 78.7 bits (195), Expect = 2e-18
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 281 KCDL--CSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKC 336
C + C + FS LT H+++H G K +C +C + FSR +LT H++ H G K C
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 337 DLCSKEFSHKSNLTKHMNLHQG 358
D+C ++F+ +H +H
Sbjct: 66 DICGRKFARSDERKRHTKIHLR 87
Score = 78.3 bits (194), Expect = 3e-18
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 254 KCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKC 309
C + C + FS LT H+++H G K +C +C + FS +LT H++ H G K C
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 310 DLCSKEFSRKSYLTEHMKLHQGIKN 334
D+C ++F+R H K+H K+
Sbjct: 66 DICGRKFARSDERKRHTKIHLRQKD 90
Score = 71.3 bits (176), Expect = 9e-16
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 335 KCDL--CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC 390
C + C + FS +LT+H+ +H G + ++C +C + FS HLT H + H K C
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 391 DLCSKEFSSKRILTEHMKLHQG 412
D+C ++F+ H K+H
Sbjct: 66 DICGRKFARSDERKRHTKIHLR 87
Score = 64.4 bits (158), Expect = 2e-13
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMK 219
+H+++H G + ++C +C + FS +LT H++ H G K CD+C ++F+ H K
Sbjct: 24 RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83
Query: 220 LHQGIKN 226
+H K+
Sbjct: 84 IHLRQKD 90
Score = 42.5 bits (101), Expect = 1e-05
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 13/56 (23%)
Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN 199
++C+ H++ H G + + CD+C +KF+ H K+H K+
Sbjct: 35 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD 90
Score = 38.6 bits (91), Expect = 3e-04
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 389 KCDL--CSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
C + C + FS LT H+++H G ++C +C + FS +LT
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLT 51
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 76.5 bits (189), Expect = 2e-17
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 289 FSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSH 345
+ E ++H C+K +++ S+L H++ H G K KC C F+
Sbjct: 3 SGSSGPDLEKRRIHYCDY---PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 346 KSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQD 385
LT+H H G + ++C +C++ FS HL H K HQ+
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 71.5 bits (176), Expect = 1e-15
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 262 FSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSR 318
+ E ++H C+K ++ S+L H++ H G K KC C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 319 KSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQ 357
LT H + H G K +C +C++ FS +L HM HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 67.7 bits (166), Expect = 2e-14
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 208 FSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDL--CSKEFST 264
S E ++H C+K ++ S+L H++ H G K KC C F+
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 265 KSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQ 303
LT H + H G K +C +C++ FS +L HMK HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 66.9 bits (164), Expect = 4e-14
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 180 KFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFS 236
+ ++H C+K ++ S+L H++ H G K KC C F+
Sbjct: 2 SSGSSGPDLEKRRIHYCDY---PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 237 TKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQ 276
LT H + H G K +C +C++ FS +L HMK HQ
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 66.5 bits (163), Expect = 5e-14
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 316 FSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSW 372
E ++H C+K ++ S+L H+ H G + YKC C F+
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 373 KGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQ 411
LT H + H K +C +C++ FS L HMK HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 64.6 bits (158), Expect = 3e-13
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 160 QEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDL--CSKEFSSKSYLTE 216
+ ++H C+K ++ S+L AH++ H G K KC C F+ LT
Sbjct: 9 DLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTR 65
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQ 249
H + H G K +C +C++ FS +L HMK HQ
Sbjct: 66 HYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 32.2 bits (74), Expect = 0.061
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 10/67 (14%)
Query: 370 FSWKGHLTEHRKLHQDIKNKCDL--CSKEFSSKRILTEHMKLHQGIT-YKCGL--CSKEF 424
G E R++H CD C+K ++ L H++ H G YKC C F
Sbjct: 3 SGSSGPDLEKRRIH-----YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 425 SCKSNLT 431
+ LT
Sbjct: 58 ARSDELT 64
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 75.2 bits (186), Expect = 3e-17
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL 365
C +C K F R S L+ H+ +H + C C K F KS++ KH +H G + +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 366 CSKEFSWKGHLTEHRKLH 383
C K FS +L H + H
Sbjct: 63 CGKAFSQSSNLITHSRKH 80
Score = 72.8 bits (180), Expect = 2e-16
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL 338
C +C K F S L+ H+ +H + C C K F +KS + +H +H G K +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 339 CSKEFSHKSNLTKHMNLHQG 358
C K FS SNL H H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 71.3 bits (176), Expect = 7e-16
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCD 229
+ C +C K F S L+ H+ +H + C C K F KS + +H +H G K +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 230 LCSKEFSTKSYLTEHMKLHQG 250
+C K FS S L H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 68.2 bits (168), Expect = 8e-15
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDL 257
C +C K F S L+ H+ +H + C C K F KS + +H +H G K +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 258 CSKEFSTKSYLTEHMKLHQG 277
C K FS S L H + H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 67.8 bits (167), Expect = 1e-14
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDL 284
C +C K F S L+ H+ +H + C C K F KS + +H +H G K +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 285 CSKEFSTKSYLTEHMKLHQG 304
C K FS S L H + H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 66.3 bits (163), Expect = 4e-14
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL 392
C +C K F S L+ H+ +H R Y C C K F K + +H +H K +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 393 CSKEFSSKRILTEHMKLHQG 412
C K FS L H + H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 60.5 bits (148), Expect = 5e-12
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG-ITYKCG 418
+ C +C K F L+ H +H D + C C K F K + +H +H G +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 419 LCSKEFSCKSNLT 431
+C K FS SNL
Sbjct: 62 VCGKAFSQSSNLI 74
Score = 56.3 bits (137), Expect = 1e-10
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 14/81 (17%)
Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCD 202
+ C+ H+ +H R Y C C K+F KS + H +H G K +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 203 LCSKEFSSKSYLTEHMKLHQG 223
+C K FS S L H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 26.6 bits (60), Expect = 4.0
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 414 TYKCGLCSKEFSCKSNLT 431
++ C +C K F S L+
Sbjct: 1 SFDCKICGKSFKRSSTLS 18
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 75.6 bits (187), Expect = 3e-17
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR---YKC 363
C++C K F +L H H G K C +C F K ++ H+ H G Y C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 364 DLCSKEFSWKGHLTEHRK 381
C K FS HL H K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 73.7 bits (182), Expect = 2e-16
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK---C 336
C++C K F +L H H G K C +C F RK ++ H++ H G K C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 337 DLCSKEFSHKSNLTKHM 353
C K FS +L H+
Sbjct: 69 QSCGKGFSRPDHLNGHI 85
Score = 72.9 bits (180), Expect = 3e-16
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIKNK--- 227
C++C K F +L H H G K C +C F K ++ H++ H G K
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 228 CDLCSKEFSTKSYLTEHMK 246
C C K FS +L H+K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 69.8 bits (172), Expect = 3e-15
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKNK---C 255
C++C K F +L H H G K C +C F K ++ H++ H G K C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 256 DLCSKEFSTKSYLTEHMK 273
C K FS +L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 69.4 bits (171), Expect = 5e-15
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKNK---C 282
C++C K F +L H H G K C +C F K ++ H++ H G K C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 283 DLCSKEFSTKSYLTEHMK 300
C K FS +L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 65.2 bits (160), Expect = 1e-13
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKNK---C 390
C++C K F +L +H H G + Y C +C F K ++ H + H K C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 391 DLCSKEFSSKRILTEHMK 408
C K FS L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 62.1 bits (152), Expect = 2e-12
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT---YK 416
C++C K F HL H+ H K C +C F K ++ H++ H G Y
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 417 CGLCSKEFSCKSNLT 431
C C K FS +L
Sbjct: 68 CQSCGKGFSRPDHLN 82
Score = 56.0 bits (136), Expect = 2e-10
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 16/79 (20%)
Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKNK--- 200
C+ +H H G + Y C +C +F K ++ H++ H G K
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 201 CDLCSKEFSSKSYLTEHMK 219
C C K FS +L H+K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 67.2 bits (165), Expect = 2e-14
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHMNLHQGIR-YKC 363
C K +++ S+L H++ H G K CD C +F+ LT+H H G R ++C
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68
Query: 364 DLCSKEFSWKGHLTEHRKLH 383
C + FS HL H K H
Sbjct: 69 QKCDRAFSRSDHLALHMKRH 88
Score = 65.6 bits (161), Expect = 9e-14
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 162 KHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDL--CSKEFSSKSYLTEHM 218
K H C K ++ S+L AH++ H G K CD C +F+ LT H
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57
Query: 219 KLHQGIKN-KCDLCSKEFSTKSYLTEHMKLH 248
+ H G + +C C + FS +L HMK H
Sbjct: 58 RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 63.7 bits (156), Expect = 5e-13
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 275 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSRKSYLTEHMKLHQ 330
C K ++ S+L H++ H G K CD C +F+R LT H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 331 GIKN-KCDLCSKEFSHKSNLTKHMNLH 356
G + +C C + FS +L HM H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 60.2 bits (147), Expect = 8e-12
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQ 276
C K ++ S+L H++ H G K CD C +F+ LT H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 277 GIKN-KCDLCSKEFSTKSYLTEHMKLH 302
G + +C C + FS +L HMK H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 59.5 bits (145), Expect = 1e-11
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIKN-KC 255
C K ++ S+L H++ H G K CD C +F+ LT H + H G + +C
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68
Query: 256 DLCSKEFSTKSYLTEHMKLH 275
C + FS +L HMK H
Sbjct: 69 QKCDRAFSRSDHLALHMKRH 88
Score = 44.8 bits (107), Expect = 2e-06
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 30/107 (28%)
Query: 329 HQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSWKGHLTEHRKLHQ 384
C K ++ S+L H+ H G + Y CD C +F+ LT H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 385 DIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNLT 431
+ ++C C + FS +L
Sbjct: 62 GHRP--------------------------FQCQKCDRAFSRSDHLA 82
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 65.9 bits (162), Expect = 4e-14
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 320 SYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLT 377
+ H + K KCD C F +K NL H +H G + Y+C++C +F+ +L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 378 EHRKLH 383
H ++H
Sbjct: 63 THTRIH 68
Score = 65.2 bits (160), Expect = 1e-13
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 293 SYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLT 350
+ H + K KCD C F K L H +H G K +C++C +F+ +NL
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 351 KHMNLHQG 358
H +H G
Sbjct: 63 THTRIHSG 70
Score = 63.6 bits (156), Expect = 3e-13
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 266 SYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLT 323
+ H + K KCD C F K L H +H G K +C++C +F+R + L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 324 EHMKLHQGIK 333
H ++H G K
Sbjct: 63 THTRIHSGEK 72
Score = 61.3 bits (150), Expect = 2e-12
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 212 SYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLT 269
+ H + K KCD C F K L H +H G K +C++C +F+ + L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 270 EHMKLHQGIK 279
H ++H G K
Sbjct: 63 THTRIHSGEK 72
Score = 60.9 bits (149), Expect = 3e-12
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 185 SYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLT 242
+ H + K KCD C F K L H +H G K +C++C +F+ + L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 243 EHMKLHQGIK 252
H ++H G K
Sbjct: 63 THTRIHSGEK 72
Score = 57.8 bits (141), Expect = 3e-11
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMK 219
H + + YKCD C F K L +H +H G K +C++C +F+ + L H +
Sbjct: 7 HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66
Query: 220 LHQGIK 225
+H G K
Sbjct: 67 IHSGEK 72
Score = 56.3 bits (137), Expect = 1e-10
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 347 SNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILT 404
+ H ++ + YKCD C F +KG+L H+ +H K +C++C +F+ L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 405 EHMKLHQG 412
H ++H G
Sbjct: 63 THTRIHSG 70
Score = 30.9 bits (71), Expect = 0.11
Identities = 9/30 (30%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 403 LTEHMKLHQGI-TYKCGLCSKEFSCKSNLT 431
H + YKC C F K NL
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLA 34
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 64.1 bits (157), Expect = 3e-13
Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 295 LTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKN-----KCDLCSKEFSHKSN 348
+ H G K C C K F +K L H K + C C K F+ ++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 349 LTKHMNLHQGIR-YKCDLCSKEF 370
+ +H + G + +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 59.1 bits (144), Expect = 2e-11
Identities = 18/83 (21%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 268 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKN-----KCDLCSKEFSRKSY 321
+ H G K C C K F K L H K + C C K F+R++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 322 LTEHMKLHQGIKN-KCDLCSKEF 343
+ H G + +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 57.5 bits (140), Expect = 6e-11
Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-----KCDLCSKEFSSKSYLT 215
+ H G + Y C C K F K L H K + C C K F+ ++ +
Sbjct: 5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMA 64
Query: 216 EHMKLHQGIKN-KCDLCSKEF 235
H G + +
Sbjct: 65 RHADNCAGPDGVEGENSGPSS 85
Score = 57.2 bits (139), Expect = 8e-11
Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 7/83 (8%)
Query: 214 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKN-----KCDLCSKEFSTKSY 267
+ H G K C C K F K L H K + C C K F+ ++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 268 LTEHMKLHQGIKN-KCDLCSKEF 289
+ H G + +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 55.2 bits (134), Expect = 4e-10
Identities = 18/84 (21%), Positives = 25/84 (29%), Gaps = 7/84 (8%)
Query: 348 NLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-----KCDLCSKEFSSKR 401
+ H G + Y C C K F K L H K + D C C K F+ +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 402 ILTEHMKLHQG-ITYKCGLCSKEF 424
+ H G +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 44.8 bits (107), Expect = 2e-06
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Query: 374 GHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT-----YKCGLCSKEFSCK 427
G + H K C C K F K++L H K + + C C K F+ +
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 428 SNLT 431
+ +
Sbjct: 61 NTMA 64
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 62.8 bits (154), Expect = 6e-13
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 319 KSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHL 376
+ + KCD C K FSH S+L+KH H G + YKCD C K F + HL
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 377 TEHRKLH 383
H ++H
Sbjct: 63 IGHHRVH 69
Score = 59.0 bits (144), Expect = 1e-11
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 292 KSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNL 349
+ + KCD C K FS S L++H + H G K KCD C K F +S+L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 350 TKHMNLHQG 358
H +H G
Sbjct: 63 IGHHRVHTG 71
Score = 58.2 bits (142), Expect = 3e-11
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 265 KSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYL 322
+ + KCD C K FS S L++H + H G K KCD C K F ++S+L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 323 TEHMKLHQGIK 333
H ++H G
Sbjct: 63 IGHHRVHTGSG 73
Score = 55.9 bits (136), Expect = 1e-10
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 210 SKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSY 267
S + + KCD C K FS S L++H + H G K KCD C K F +S+
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 268 LTEHMKLHQGIK 279
L H ++H G
Sbjct: 62 LIGHHRVHTGSG 73
Score = 55.1 bits (134), Expect = 3e-10
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 345 HKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRI 402
+ + + R YKCD C K FS L++HR+ H K KCD C K F +
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 403 LTEHMKLHQG 412
L H ++H G
Sbjct: 62 LIGHHRVHTG 71
Score = 54.4 bits (132), Expect = 6e-10
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
+ + R YKCD C K FS S L+ H + H G K KCD C K F +S+L H +
Sbjct: 8 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67
Query: 220 LHQGIK 225
+H G
Sbjct: 68 VHTGSG 73
Score = 29.7 bits (68), Expect = 0.33
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 403 LTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
+ YKC C K FS S+L+
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLS 35
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 61.8 bits (151), Expect = 2e-12
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 295 LTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK---CDLCSKEFSHKSNLT 350
+ H G K +C +C F++ + H+ C C + KS+L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 351 KHM-NLHQG 358
H+ H
Sbjct: 63 VHLRKQHSY 71
Score = 61.8 bits (151), Expect = 2e-12
Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 5/67 (7%)
Query: 322 LTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR---YKCDLCSKEFSWKGHLT 377
+ H G K +C +C F+ + H+ + C C + K L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 378 EH-RKLH 383
H RK H
Sbjct: 63 VHLRKQH 69
Score = 60.6 bits (148), Expect = 3e-12
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKNK---CDLCSKEFSSKSYLTEH 217
+ H G + Y+C +C +F+ + H+ C C + KS L H
Sbjct: 5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64
Query: 218 M-KLHQGIK 225
+ K H
Sbjct: 65 LRKQHSYSG 73
Score = 59.5 bits (145), Expect = 1e-11
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Query: 268 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKNK---CDLCSKEFSRKSYLT 323
+ H G K +C +C F+ + H+ C C +RKS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 324 EHM-KLHQGIK 333
H+ K H
Sbjct: 63 VHLRKQHSYSG 73
Score = 57.5 bits (140), Expect = 5e-11
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Query: 187 LTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIKNK---CDLCSKEFSTKSYLT 242
+ + H G K +C +C F+ + H+ C C + KS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 243 EHM-KLHQGIK 252
H+ K H
Sbjct: 63 VHLRKQHSYSG 73
Score = 57.1 bits (139), Expect = 6e-11
Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 241 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKNK---CDLCSKEFSTKSYLT 296
+ H G K +C +C F+ + H+ C C + KS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 297 EHM-KLHQGLK 306
H+ K H
Sbjct: 63 VHLRKQHSYSG 73
Score = 56.8 bits (138), Expect = 8e-11
Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 214 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKNK---CDLCSKEFSTKSYLT 269
+ H G K +C +C F+ + H+ C C + KS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 270 EHM-KLHQGIK 279
H+ K H
Sbjct: 63 VHLRKQHSYSG 73
Score = 54.5 bits (132), Expect = 6e-10
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Query: 348 NLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKNK---CDLCSKEFSSKRIL 403
+ H G + Y+C +C F+ G + H C C + K L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 404 TEHM-KLHQG 412
H+ K H
Sbjct: 62 GVHLRKQHSY 71
Score = 47.5 bits (114), Expect = 2e-07
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 374 GHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT---YKCGLCSKEFSCKSN 429
G + H K +C +C F+ + H+ + C C + KS+
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 430 LT 431
L
Sbjct: 61 LG 62
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 61.0 bits (149), Expect = 2e-12
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
KC CS S K+ L H ++H + KC+ CS + SNL+KHM G
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 59.0 bits (144), Expect = 1e-11
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN 226
KC CS S+K+ L H ++H + KC+ CS + S L++HMK G +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 59.0 bits (144), Expect = 1e-11
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
KC CS S K+ L H +H R +KC+ CS + +L++H K
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 57.1 bits (139), Expect = 6e-11
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN 334
KC CS S+K+ L H ++H + KC+ CS + + S L++HMK G +
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 56.4 bits (137), Expect = 1e-10
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN 253
KC CS SSK+ L H ++H + KC+ CS + S L++HMK G +
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 56.0 bits (136), Expect = 1e-10
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN 280
KC CS S+K+ L H ++H + KC+ CS + S L++HMK G +
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 49.0 bits (118), Expect = 4e-08
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG 412
KC CS S K L H ++H + KC+ CS + L++HMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 45.2 bits (108), Expect = 8e-07
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGI-TYKCGLCSKEFSCKSNLT 431
KC CS SSK L H ++H +KC CS + SNL+
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLS 54
Score = 26.7 bits (60), Expect = 3.5
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 415 YKCGLCSKEFSCKSNLT 431
KC CS S K+ L
Sbjct: 10 EKCSECSYSCSSKAALR 26
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 60.6 bits (148), Expect = 4e-12
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 322 LTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEH 379
+ +H G K C C K FS S L +H +H G + YKC C K FS L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 380 RKLH 383
+++H
Sbjct: 62 QRIH 65
Score = 59.8 bits (146), Expect = 6e-12
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 295 LTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKH 352
+ +H G K C C K FSR S L +H ++H G K KC C K FS S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 353 MNLHQG 358
+H
Sbjct: 62 QRIHTS 67
Score = 57.9 bits (141), Expect = 3e-11
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 268 LTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEH 325
+ +H G K C C K FS S L +H ++H G K KC C K FS+ S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 326 MKLHQGIK 333
++H
Sbjct: 62 QRIHTSGP 69
Score = 55.9 bits (136), Expect = 1e-10
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 214 LTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEH 271
+ +H G K C C K FS S L +H ++H G K KC C K FS S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 272 MKLHQGIK 279
++H
Sbjct: 62 QRIHTSGP 69
Score = 55.9 bits (136), Expect = 1e-10
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
+H G + Y C C K FS S L H ++H G K KC C K FS S L H +
Sbjct: 4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63
Query: 220 LHQGIK 225
+H
Sbjct: 64 IHTSGP 69
Score = 50.2 bits (121), Expect = 2e-08
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 349 LTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEH 406
+ +H G + Y C C K FS L +H+++H K KC C K FS L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 407 MKLHQG 412
++H
Sbjct: 62 QRIHTS 67
Score = 43.6 bits (104), Expect = 3e-06
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 376 LTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
+ +H K C C K FS IL +H ++H G YKC C K FS S L
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 59.5 bits (145), Expect = 7e-12
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 335 KCDLCSKEFSHKSNLTKHM--NLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDI 386
+C +CS+ ++H SN +H + + ++ Y C C KEF+ K ++T H K+ I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 56.4 bits (137), Expect = 1e-10
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 172 YKCDLCSKKFSTKSYLTAHM--KLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGI 224
Y+C +CS+ ++ S H + +K C C KEF+ K +T H+K+ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 56.0 bits (136), Expect = 1e-10
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 308 KCDLCSKEFSRKSYLTEHM--KLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGI 359
+C +CS+ ++ S H + +K C C KEF+ K N+T H+ + I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 55.6 bits (135), Expect = 2e-10
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 281 KCDLCSKEFSTKSYLTEHM--KLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGI 332
+C +CS+ ++ S H + +K C C KEF+RK +T H+K+ I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 52.6 bits (127), Expect = 2e-09
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 200 KCDLCSKEFSSKSYLTEHM--KLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 251
+C +CS+ ++ S H + +K C C KEF+ K +T H+K+ I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 52.2 bits (126), Expect = 3e-09
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 227 KCDLCSKEFSTKSYLTEHM--KLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
+C +CS+ ++ S H + +K C C KEF+ K +T H+K+ I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 48.7 bits (117), Expect = 4e-08
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 361 YKCDLCSKEFSWKGHLTEHR--KLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQGI 413
Y+C +CS+ ++ + H +++K C C KEF+ K +T H+K+ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 40.2 bits (95), Expect = 4e-05
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 15/56 (26%)
Query: 157 YKCQE------------KHM--KLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGL 197
Y+C+ +H + V+ Y C C K+F+ K +TAH+K+ +
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 27.5 bits (62), Expect = 1.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C +CS+ ++ SN
Sbjct: 11 YRCKVCSRVYTHISNFC 27
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 59.3 bits (144), Expect = 1e-11
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR----YKCDLCSKEFSWKGHLTEHRKLH 383
+C++C K++L H H + C+ C K F + HR
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 58.2 bits (141), Expect = 3e-11
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 4/53 (7%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLH---QGIKN-KCDLCSKEFSHKSNLTKHMNLH 356
+C++C +K+ L H + H C+ C K F ++ H +
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 56.3 bits (136), Expect = 1e-10
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLH---QGIKN-KCDLCSKEFSTKSYLTEHMKLH 275
+C++C K+ L H + H C+ C K F + H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 56.3 bits (136), Expect = 1e-10
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLH---QGIKN-KCDLCSKEFSTKSYLTEHMKLH 302
+C++C K+ L H + H C+ C K F + H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 55.9 bits (135), Expect = 2e-10
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLH---QGIKN-KCDLCSKEFSTKSYLTEHMKLH 248
+C++C K+ L H + H C+ C K F + H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 52.4 bits (126), Expect = 3e-09
Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN----KCDLCSKEFSSKRILTEHMKLH 410
+C++C K L H++ H + C+ C K F + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 44.7 bits (106), Expect = 2e-06
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT----YKCGLCSKEFSCKSNLT 431
+C++C K L H + H + C C K F ++
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVA 55
Score = 41.6 bits (98), Expect = 2e-05
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 4/37 (10%)
Query: 162 KHMKLHQGVR----YKCDLCSKKFSTKSYLTAHMKLH 194
H + H + C+ C K+F + AH
Sbjct: 25 WHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 58.0 bits (141), Expect = 4e-11
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLK-NKCD--LCSKEFSRKSYLTEHMKLHQGIKN-KCDLCS 340
C K F + L H H +C C K FS S L H K+H G K D CS
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 341 KEFSHKSNLTKHM 353
+ KH+
Sbjct: 69 FVGKTWTLYLKHV 81
Score = 56.5 bits (137), Expect = 1e-10
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 231 CSKEFSTKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIKN-KCDLCS 286
C K F + L H H +C C K FS S L H K+H G K D CS
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 287 KEFSTKSYLTEHMK 300
T + +H+
Sbjct: 69 FVGKTWTLYLKHVA 82
Score = 55.7 bits (135), Expect = 3e-10
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 204 CSKEFSSKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIKN-KCDLCS 259
C K F + L H H +C C K FS S L H K+H G K D CS
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 260 KEFSTKSYLTEHMK 273
T + +H+
Sbjct: 69 FVGKTWTLYLKHVA 82
Score = 55.3 bits (134), Expect = 4e-10
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Query: 312 CSKEFSRKSYLTEHMKLHQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGIR-YKCDLCS 367
C K F + + L H H +C C K FS S L +H +H G K D CS
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 368 KEFSWKGHLTEHRK 381
+H
Sbjct: 69 FVGKTWTLYLKHVA 82
Score = 51.1 bits (123), Expect = 1e-08
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCD--LCSKEFSWKGHLTEHRKLHQDIKN-KCDLCS 394
C K F + L H H Y+C C K FS L H K+H K D CS
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 395 KEFSSKRILTEHMK 408
+ + +H+
Sbjct: 69 FVGKTWTLYLKHVA 82
Score = 47.2 bits (113), Expect = 2e-07
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 163 HMKLHQGVR-YKCD--LCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHM 218
H H Y+C C K+FS S L H K+H G K D CS + + +H+
Sbjct: 22 HQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81
Query: 219 K 219
Sbjct: 82 A 82
Score = 44.5 bits (106), Expect = 2e-06
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 361 YKCDL--CSKEFSWKGHLTEHRKLHQDIK-NKCD--LCSKEFSSKRILTEHMKLHQGIT- 414
Y C C K F L H+ H +C C K FS L H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 415 YKCGLCSKEFSCKSNLT 431
K CS +
Sbjct: 62 KKDDSCSFVGKTWTLYL 78
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 57.9 bits (139), Expect = 1e-10
Identities = 22/103 (21%), Positives = 31/103 (30%), Gaps = 8/103 (7%)
Query: 317 SRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGH 375
S S + + G +C CS + LT HMN R +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 376 LTEHRKLHQDIKN-------KCDLCSKEFSSKRILTEHMKLHQ 411
R L + KC C F S + L+ HM +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 57.5 bits (138), Expect = 1e-10
Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 8/108 (7%)
Query: 209 SSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSY 267
SS S + + G +C CS + T LT HM ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 268 LTEHMKLHQGIKN-------KCDLCSKEFSTKSYLTEHMKLHQGLKNK 308
L + KC C F + L+ HM + +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109
Score = 57.5 bits (138), Expect = 1e-10
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 8/95 (8%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLH 221
+ + G ++C CS + T LT HM ++ + L
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 222 QGIKN-------KCDLCSKEFSTKSYLTEHMKLHQ 249
+ KC C F + L+ HM +
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 57.5 bits (138), Expect = 2e-10
Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 8/103 (7%)
Query: 182 STKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSY 240
S+ S + + G +C CS + + LT HM ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 241 LTEHMKLHQGIKN-------KCDLCSKEFSTKSYLTEHMKLHQ 276
L + KC C F + L+ HM +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 57.1 bits (137), Expect = 2e-10
Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 8/99 (8%)
Query: 263 STKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSY 321
S+ S + + G +C CS + T LT HM ++ ++
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 322 LTEHMKLHQGIKN-------KCDLCSKEFSHKSNLTKHM 353
L + KC C F +L+ HM
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100
Score = 56.7 bits (136), Expect = 3e-10
Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 8/103 (7%)
Query: 236 STKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSY 294
S+ S + + G +C CS + T LT HM ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 295 LTEHMKLHQGLKN-------KCDLCSKEFSRKSYLTEHMKLHQ 330
L + KC C F L+ HM +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 54.4 bits (130), Expect = 1e-09
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 8/98 (8%)
Query: 290 STKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSN 348
S+ S + + G +C CS + LT HM ++ + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 349 LTKHMNLHQGIR-------YKCDLCSKEFSWKGHLTEH 379
+ +L + KC C F L+ H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 50.1 bits (119), Expect = 5e-08
Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 8/96 (8%)
Query: 344 SHKSNLTKHMNLHQG-IRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRI 402
S S+ + ++ G +++C CS + LT H ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 403 LTEHMKLHQGIT-------YKCGLCSKEFSCKSNLT 431
L + KC C F +L+
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLS 97
Score = 26.7 bits (58), Expect = 7.8
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLKNK 200
KC C F + L+ HM + +
Sbjct: 81 LKCMYCGHSFESLQDLSVHMIKTKHYQKV 109
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 56.4 bits (137), Expect = 1e-10
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 308 KCDL--CSKEFSRKSYLTEHMKL-HQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGIR- 360
CD C + FS + YL H K H K C C K F+ K +L +HM LH R
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 361 YKCDLCSKEF 370
Y C+
Sbjct: 69 YICEFSGPSS 78
Score = 52.2 bits (126), Expect = 3e-09
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 172 YKCDL--CSKKFSTKSYLTAHMKL-HQGLK-NKCD--LCSKEFSSKSYLTEHMKLHQGIK 225
CD C + FS + YL H K H K C C K F+ K +L EHMKLH +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 226 N-KCDLCSKEF 235
+ C+
Sbjct: 68 DYICEFSGPSS 78
Score = 51.0 bits (123), Expect = 1e-08
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 281 KCDL--CSKEFSTKSYLTEHMKL-HQGLK-NKCD--LCSKEFSRKSYLTEHMKLHQGIKN 334
CD C + FS + YL H K H K C C K F+ K +L EHMKLH ++
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 335 -KCDLCSKEF 343
C+
Sbjct: 69 YICEFSGPSS 78
Score = 50.2 bits (121), Expect = 2e-08
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 335 KCDL--CSKEFSHKSNLTKHM-NLHQGIR-YKCD--LCSKEFSWKGHLTEHRKLHQDIKN 388
CD C + FS++ L H H + + C C K F++K HL EH KLH D ++
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 389 -KCDLCSKEF 397
C+
Sbjct: 69 YICEFSGPSS 78
Score = 49.9 bits (120), Expect = 2e-08
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 227 KCDL--CSKEFSTKSYLTEHMKL-HQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIKN 280
CD C + FS + YL H K H K C C K F+ K +L EHMKLH ++
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 281 -KCDLCSKEF 289
C+
Sbjct: 69 YICEFSGPSS 78
Score = 49.9 bits (120), Expect = 3e-08
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 200 KCDL--CSKEFSSKSYLTEHMKL-HQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIKN 253
CD C + FS++ YL H K H K C C K F+ K +L EHMKLH ++
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 254 -KCDLCSKEF 262
C+
Sbjct: 69 YICEFSGPSS 78
Score = 42.9 bits (102), Expect = 8e-06
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 361 YKCDL--CSKEFSWKGHLTEH-RKLHQDIK-NKCD--LCSKEFSSKRILTEHMKLHQGIT 414
CD C + FS + +L H + H K C C K F+ K+ L EHMKLH
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 415 -YKCGLCSKEF 424
Y C
Sbjct: 68 DYICEFSGPSS 78
Score = 32.1 bits (74), Expect = 0.053
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 389 KCDL--CSKEFSSKRILTEHMKL-HQGI-TYKC--GLCSKEFSCKSNLT 431
CD C + FS+++ L H K H ++ C C K F+ K +L
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLK 57
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 54.2 bits (131), Expect = 6e-10
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 315 EFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEF 370
E + L ++ + C + C + FS LT+H+ +H G + ++C +C + F
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 371 SWKGHLTEHRKLH 383
S HLT H + H
Sbjct: 60 SRSDHLTTHIRTH 72
Score = 50.4 bits (121), Expect = 2e-08
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 288 EFSTKSYLTEHMKLHQGLKN-KCDL--CSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEF 343
E + L ++ + C + C + FSR LT H+++H G K +C +C + F
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 344 SHKSNLTKHMNLH 356
S +LT H+ H
Sbjct: 60 SRSDHLTTHIRTH 72
Score = 48.5 bits (116), Expect = 7e-08
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 261 EFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEF 316
E + L ++ + C + C + FS LT H+++H G K +C +C + F
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 317 SRKSYLTEHMKLH 329
SR +LT H++ H
Sbjct: 60 SRSDHLTTHIRTH 72
Score = 47.3 bits (113), Expect = 2e-07
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 172 YKCDL--CSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLH 221
Y C + C ++FS LT H+++H G K +C +C + FS +LT H++ H
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 46.5 bits (111), Expect = 3e-07
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 207 EFSSKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEF 262
E + L ++ + C + C + FS LT H+++H G K +C +C + F
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 263 STKSYLTEHMKLH 275
S +LT H++ H
Sbjct: 60 SRSDHLTTHIRTH 72
Score = 46.5 bits (111), Expect = 4e-07
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 180 KFSTKSYLTAHMKLHQGLKN-KCDL--CSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEF 235
+ + L ++ + C + C + FS LT H+++H G K +C +C + F
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 236 STKSYLTEHMKLH 248
S +LT H++ H
Sbjct: 60 SRSDHLTTHIRTH 72
Score = 45.8 bits (109), Expect = 6e-07
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 234 EFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEF 289
E + L ++ + C + C + FS LT H+++H G K +C +C + F
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 290 STKSYLTEHMKLH 302
S +LT H++ H
Sbjct: 60 SRSDHLTTHIRTH 72
Score = 45.8 bits (109), Expect = 7e-07
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 342 EFSHKSNLTKHMNLHQGIRYKCDL--CSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFS 398
E +NL ++ Y C + C + FS LT H ++H K +C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 399 SKRILTEHMKLH 410
LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 39.2 bits (92), Expect = 1e-04
Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLH 194
+H+++H G + ++C +C + FS +LT H++ H
Sbjct: 39 RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 33.4 bits (77), Expect = 0.015
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 369 EFSWKGHLTEHRKLHQDIKN-KCDL--CSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEF 424
E +L + + C + C + FS LT H+++H G ++C +C + F
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 425 SCKSNLT 431
S +LT
Sbjct: 60 SRSDHLT 66
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 50.2 bits (121), Expect = 1e-08
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHM 353
C++C++ F+R+ +L H + H K C LC++ F+ + L +H
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50
Score = 48.6 bits (117), Expect = 4e-08
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHM-KLHQG 331
C++C++ F+ + +L H + H K C LC++ F+R+ L H K+H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 47.9 bits (115), Expect = 7e-08
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHM-KLHQG 223
+ C++C++ F+ + +L H + H K C LC++ F+ + L H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 45.6 bits (109), Expect = 5e-07
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHM-KLHQG 277
C++C++ F+ + +L H + H K C LC++ F+ + L H K+H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 41.7 bits (99), Expect = 1e-05
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHM-KLHQG 412
+ C++C++ F+ + HL H + H + K C LC++ F+ + +L H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 38.2 bits (90), Expect = 2e-04
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
C++C++ F+ + L H + H Y CGLC++ F+ + L
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLI 47
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 51.8 bits (123), Expect = 1e-08
Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 161 EKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKL 220
+ Y+C LC+ K S+ +H +L + C CS F S EH
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESK 64
Query: 221 HQGIKNKCDLCSKEFSTKSYLTEHMK 246
+ K C C + F + + H
Sbjct: 65 CEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 47.6 bits (112), Expect = 4e-07
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCS 259
+C LC+ + SS H +L + C CS F + EH + K C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 260 KEFSTKSYLTEHMK 273
+ F + + H
Sbjct: 77 RTFKSSFSIWRHQV 90
Score = 47.6 bits (112), Expect = 4e-07
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCS 286
+C LC+ + S+ H +L + C CS F + EH + K C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 287 KEFSTKSYLTEHMK 300
+ F + + H
Sbjct: 77 RTFKSSFSIWRHQV 90
Score = 46.4 bits (109), Expect = 9e-07
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCS 340
+C LC+ + S+ H +L + C CS F EH + K C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 341 KEFSHKSNLTKH 352
+ F ++ +H
Sbjct: 77 RTFKSSFSIWRH 88
Score = 46.0 bits (108), Expect = 1e-06
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 347 SNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEH 406
S + + Y+C LC+ + S H +L ++ C CS F S + EH
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61
Query: 407 MKLHQGITYKCGLCSKEFSCKSNL 430
+ C C + F ++
Sbjct: 62 ESKCEYKKLTCLECMRTFKSSFSI 85
Score = 46.0 bits (108), Expect = 1e-06
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCS 367
+C LC+ + S H +L + C CS F +H + + + C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 368 KEFSWKGHLTEHRK 381
+ F + H+
Sbjct: 77 RTFKSSFSIWRHQV 90
Score = 44.5 bits (104), Expect = 4e-06
Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCS 394
+C LC+ + S H L + C CS F EH + K C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 395 KEFSSKRILTEHMK 408
+ F S + H
Sbjct: 77 RTFKSSFSIWRHQV 90
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 51.5 bits (122), Expect = 2e-08
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Query: 288 EFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKS 347
E S +++ H+G+ + +E R LT K K + + + +S
Sbjct: 3 ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60
Query: 348 N-LTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEH 406
+ L + + ++ C LC FS L +H + + K C +C KEF+S +H
Sbjct: 61 SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDH 119
Query: 407 MK 408
+
Sbjct: 120 VC 121
Score = 46.5 bits (109), Expect = 1e-06
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 207 EFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKS 266
E S +++ H+GI + +E LT K K + + + +S
Sbjct: 3 ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60
Query: 267 -YLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEH 325
YL + + C LC FS+ L +H++ + K C +C KEF+ +H
Sbjct: 61 SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDH 119
Query: 326 MK 327
+
Sbjct: 120 VC 121
Score = 46.1 bits (108), Expect = 2e-06
Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 161 EKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFS-SKSYLTEHMK 219
+K++ H+G+ + ++ LT K K + + + SYL +
Sbjct: 11 KKYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA 68
Query: 220 LHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMK 273
+ C LC FS+ L +H++ + K C +C KEF++ +H+
Sbjct: 69 SKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHVC 121
Score = 45.3 bits (106), Expect = 3e-06
Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 234 EFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKS 293
E S +++ H+GI + +E LT K K + + + +S
Sbjct: 3 ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60
Query: 294 -YLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKH 352
YL + + C LC FS L +H++ + K C +C KEF+ + H
Sbjct: 61 SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDH 119
Query: 353 M 353
+
Sbjct: 120 V 120
Score = 45.3 bits (106), Expect = 3e-06
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 4/118 (3%)
Query: 184 KSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKS-YLT 242
S ++ H+G+ + +E LT K K + + + +S YL
Sbjct: 7 DSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLY 64
Query: 243 EHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMK 300
+ + C LC FS+ L +H++ + K C +C KEF++ +H+
Sbjct: 65 RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHVC 121
Score = 29.5 bits (65), Expect = 1.1
Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 3/87 (3%)
Query: 346 KSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFS-SKRILT 404
S K+++ H+GI + +E LT +K K + + + L
Sbjct: 7 DSGSKKYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLY 64
Query: 405 EHMKLHQGITYKCGLCSKEFSCKSNLT 431
+ + C LC FS +L
Sbjct: 65 RLLASKAISQFVCPLCLMPFSSSVSLK 91
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 45.5 bits (107), Expect = 6e-07
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 171 RYKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+Y C+ C + S L H++ H ++ C C+ F +K LT+HMK K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 42.4 bits (99), Expect = 6e-06
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
C+ C + S L +H++ H ++ C C+ F K NLTKHM
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 41.6 bits (97), Expect = 1e-05
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
C+ C S L KH+ H +R Y C C+ F KG+LT+H K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 41.6 bits (97), Expect = 1e-05
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 360 RYKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG 412
+Y C+ C L +H + H D++ C C+ F +K LT+HMK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 40.9 bits (95), Expect = 3e-05
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
C+ C S L +H++ H ++ C C+ F K LT+HMK K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 40.5 bits (94), Expect = 3e-05
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
C+ C S L +H++ H ++ C C+ F TK LT+HMK K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 40.5 bits (94), Expect = 3e-05
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
C+ C S L +H++ H ++ C C+ F TK LT+HMK K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 31.6 bits (71), Expect = 0.049
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
C+ C +L +H++ H + Y C C+ F K NLT
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLT 46
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 42.0 bits (98), Expect = 1e-05
Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 7/67 (10%)
Query: 318 RKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHL 376
+ K+H G ++ KC C F +S L++ C+ C K+ + L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55
Query: 377 TEHRKLH 383
+
Sbjct: 56 NKDEGNE 62
Score = 39.6 bits (92), Expect = 1e-04
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
Query: 291 TKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNL 349
+ + K+H G ++ KC C F R+S L+ C+ C K+ ++ L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55
Query: 350 TKHMNLHQG 358
K G
Sbjct: 56 NKDEGNESG 64
Score = 39.3 bits (91), Expect = 1e-04
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 264 TKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYL 322
+ + K+H G ++ KC C F +S L+ C+ C K+ +++ L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55
Query: 323 TEHMKLHQGIK 333
+ G K
Sbjct: 56 NKDEGNESGKK 66
Score = 38.5 bits (89), Expect = 3e-04
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 7/67 (10%)
Query: 347 SNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTE 405
+ K +H G R KC C F + L+ + C+ C K+ + L +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNK 57
Query: 406 HMKLHQG 412
G
Sbjct: 58 DEGNESG 64
Score = 38.5 bits (89), Expect = 3e-04
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
Query: 210 SKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYL 268
S + K+H G ++ KC C F +S L+ C+ C K+ ++ L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55
Query: 269 TEHMKLHQGIK 279
+ G K
Sbjct: 56 NKDEGNESGKK 66
Score = 37.3 bits (86), Expect = 7e-04
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKL 220
K K+H G R KC C F +S L+ C+ C K+ ++ L +
Sbjct: 8 KRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKDEGN 61
Query: 221 HQGIK 225
G K
Sbjct: 62 ESGKK 66
Score = 36.9 bits (85), Expect = 9e-04
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 7/71 (9%)
Query: 183 TKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYL 241
+ K+H G ++ KC C F +S L+ C+ C K+ ++ L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55
Query: 242 TEHMKLHQGIK 252
+ G K
Sbjct: 56 NKDEGNESGKK 66
Score = 27.3 bits (60), Expect = 2.1
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 374 GHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNLT 431
G + +K+H ++ KC C F + L+ T C C K+ ++ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALN 56
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 41.5 bits (97), Expect = 4e-05
Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 11/67 (16%)
Query: 254 KCDLCSKEFSTKSYLTEHM-KLHQGIKNK---------CDLCSKEFSTKSYLTEHMKLHQ 303
C + FST L H+ H G + C K F K L H+++H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 304 GLK-NKC 309
G K
Sbjct: 87 GEKSGPS 93
Score = 41.1 bits (96), Expect = 5e-05
Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 11/68 (16%)
Query: 172 YKCDLCSKKFSTKSYLTAHM-KLHQGLKNK---------CDLCSKEFSSKSYLTEHMKLH 221
C + FST L H+ H G + C K F +K L H+++H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 222 QGIK-NKC 228
G K
Sbjct: 86 TGEKSGPS 93
Score = 40.0 bits (93), Expect = 1e-04
Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 11/67 (16%)
Query: 200 KCDLCSKEFSSKSYLTEHM-KLHQGIKNK---------CDLCSKEFSTKSYLTEHMKLHQ 249
C + FS+ L H+ H G + C K F K L H+++H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 250 GIK-NKC 255
G K
Sbjct: 87 GEKSGPS 93
Score = 39.6 bits (92), Expect = 1e-04
Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 11/67 (16%)
Query: 281 KCDLCSKEFSTKSYLTEHM-KLHQGLKNK---------CDLCSKEFSRKSYLTEHMKLHQ 330
C + FST L H+ H G + C K F K L H+++H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 331 GIK-NKC 336
G K
Sbjct: 87 GEKSGPS 93
Score = 35.3 bits (81), Expect = 0.005
Identities = 14/59 (23%), Positives = 19/59 (32%), Gaps = 10/59 (16%)
Query: 335 KCDLCSKEFSHKSNLTKHMN-LHQGIRYK---------CDLCSKEFSWKGHLTEHRKLH 383
C + FS L H+ H G + C K F K L H ++H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 39.9 bits (94), Expect = 4e-05
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 335 KCDLCSKEFSHKSNLTKHM-NLHQGIR-YKCDLCSKEFS 371
C C K FS +L H+ +H R +KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 39.9 bits (94), Expect = 5e-05
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 172 YKCDLCSKKFSTKSYLTAHMK-LHQGLK-NKCDLCSKEFSS 210
Y C C K FS +L H+K +H + +KC + SS
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 38.7 bits (91), Expect = 1e-04
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 308 KCDLCSKEFSRKSYLTEHMK-LHQGIK-NKCDLCSKEFS 344
C C K FSR +L H+K +H + +KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 38.3 bits (90), Expect = 1e-04
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 361 YKCDLCSKEFSWKGHLTEH-RKLHQDIK-NKCDLCSKEFSS 399
Y C C K FS HL H +++H + +KC + SS
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 37.2 bits (87), Expect = 4e-04
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 200 KCDLCSKEFSSKSYLTEHMK-LHQGIK-NKCDLCSKEFST 237
C C K FS +L H+K +H + +KC + S+
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 36.8 bits (86), Expect = 5e-04
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 227 KCDLCSKEFSTKSYLTEHMK-LHQGIK-NKCDLCSKEFST 264
C C K FS +L H+K +H + +KC + S+
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 36.8 bits (86), Expect = 5e-04
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 254 KCDLCSKEFSTKSYLTEHMK-LHQGIK-NKCDLCSKEFST 291
C C K FS +L H+K +H + +KC + S+
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 281 KCDLCSKEFSTKSYLTEHMK-LHQGLK-NKCDLCSKEFS 317
C C K FS +L H+K +H + +KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 32.9 bits (76), Expect = 0.015
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 389 KCDLCSKEFSSKRILTEHMK-LHQG-ITYKCGLCSKEFS 425
C C K FS L H+K +H +KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 38.2 bits (90), Expect = 1e-04
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
G K C++C F H L H+ +H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 37.5 bits (88), Expect = 3e-04
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C++C +F L +H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 34.8 bits (81), Expect = 0.002
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K C++C F L H+++H G
Sbjct: 1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 34.8 bits (81), Expect = 0.002
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C++C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 33.6 bits (78), Expect = 0.005
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y C++C F L H ++H
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIH 34
Score = 33.6 bits (78), Expect = 0.006
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C++C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 33.2 bits (77), Expect = 0.007
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C++C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 33.2 bits (77), Expect = 0.007
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C++C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 30.2 bits (69), Expect = 0.098
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
C++C F + L H+++H G
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTG 36
Score = 25.9 bits (58), Expect = 3.1
Identities = 5/17 (29%), Positives = 6/17 (35%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C +C F L
Sbjct: 12 YPCEICGTRFRHLQTLK 28
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 37.9 bits (89), Expect = 2e-04
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C +F ++L AH+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 36.3 bits (85), Expect = 6e-04
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
G K KC+ C F ++L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 36.0 bits (84), Expect = 8e-04
Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
G + YKC+ C F HL H +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 36.0 bits (84), Expect = 8e-04
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C F + ++L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 34.8 bits (81), Expect = 0.002
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC+ C F ++L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 34.4 bits (80), Expect = 0.003
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C F ++L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 34.4 bits (80), Expect = 0.003
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C F ++L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 34.4 bits (80), Expect = 0.003
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C F ++L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 28.6 bits (65), Expect = 0.34
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
KC+ C F L H+ +H G
Sbjct: 13 KCETCGARFVQVAHLRAHVLIHTG 36
Score = 25.6 bits (57), Expect = 3.8
Identities = 7/27 (25%), Positives = 9/27 (33%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C F ++L
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLR 28
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 38.5 bits (90), Expect = 2e-04
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
Query: 162 KHMKLHQGVR-YKCDL--CSKKFSTKSYLTAHMKLHQGLKN-KCDL--CSKEFSSKSYLT 215
+R + C C K + S+L AH + H G K C C + F+ L+
Sbjct: 7 GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELS 66
Query: 216 EHMKLH 221
H + H
Sbjct: 67 RHRRTH 72
Score = 38.1 bits (89), Expect = 3e-04
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 292 KSYLTEHMKLHQGLKN-KCDL--CSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSH 345
S + +++ C C K + + S+L H + H G K C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 346 KSNLTKHMNLH 356
L++H H
Sbjct: 62 SDELSRHRRTH 72
Score = 37.0 bits (86), Expect = 8e-04
Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 265 KSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGLKN-KCDL--CSKEFSR 318
S + I++ C C K + S+L H + H G K C C + F+R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 319 KSYLTEHMKLH 329
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 35.4 bits (82), Expect = 0.002
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 319 KSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSW 372
S + I++ C C K + S+L H H G + + C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 373 KGHLTEHRKLH 383
L+ HR+ H
Sbjct: 62 SDELSRHRRTH 72
Score = 34.7 bits (80), Expect = 0.006
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 184 KSYLTAHMKLHQGLKN-KCDL--CSKEFSSKSYLTEHMKLHQGIKN-KCDL--CSKEFST 237
S + +++ C C K + S+L H + H G K C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 238 KSYLTEHMKLH 248
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 34.3 bits (79), Expect = 0.006
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 211 KSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFST 264
S + I++ C C K + S+L H + H G K C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 265 KSYLTEHMKLH 275
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 34.3 bits (79), Expect = 0.006
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 238 KSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFST 291
S + I++ C C K + S+L H + H G K C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 292 KSYLTEHMKLH 302
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 31.2 bits (71), Expect = 0.099
Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 346 KSNLTKHMNLHQGIR-YKCDL--CSKEFSWKGHLTEHRKLHQDIKN-KCDL--CSKEFSS 399
S + IR + C C K + HL H + H K C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 400 KRILTEHMKLH 410
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 42.5 bits (99), Expect = 2e-04
Identities = 28/208 (13%), Positives = 52/208 (25%), Gaps = 7/208 (3%)
Query: 15 RAIPKKTGDPISIKVDNETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGTHRTAVMEL 74
+ IP+KT S K ++ T + N S +R
Sbjct: 2 KRIPRKTKGKSSGKGNDSTERSDDGSSQLRDKQNNKAGPATTE-PGTSNREQYRARPGIA 60
Query: 75 NVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDC 134
+V+ + + P+ + + +V E D + +
Sbjct: 61 SVQRATE--SAELPMKNNDEGTPDKK-GNTRGDLVNEHSEAKDEADEATQKQAKDTDKSK 117
Query: 135 LEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLH 194
+ S + ++ R E + S S
Sbjct: 118 AQVTYSDTGINNANELSRSGNV--DNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTA 175
Query: 195 -QGLKNKCDLCSKEFSSKSYLTEHMKLH 221
G +C +CS S L H+ H
Sbjct: 176 SSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.5 bits (91), Expect = 0.002
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 7/97 (7%)
Query: 226 NKCDLCSKEFSTKSYLTEHMKLH-QGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDL 284
+ S S G +C +CS + L H+ H G+ L
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH-GLHGNMTL 211
Query: 285 CSKEFSTKSYLTEHMKLHQGLK---NKCDLCSKEFSR 318
S E +TE + Q D+ +K+ ++
Sbjct: 212 TSSEIQRH--ITEFISSWQNHPIVQVSADVENKKTAQ 246
Score = 39.1 bits (90), Expect = 0.003
Identities = 9/51 (17%), Positives = 14/51 (27%), Gaps = 1/51 (1%)
Query: 199 NKCDLCSKEFSSKSYLTEHMKLH-QGIKNKCDLCSKEFSTKSYLTEHMKLH 248
+ S S G +C +CS + L H+ H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.1 bits (90), Expect = 0.003
Identities = 9/51 (17%), Positives = 13/51 (25%), Gaps = 1/51 (1%)
Query: 280 NKCDLCSKEFSTKSYLTEHMKLH-QGLKNKCDLCSKEFSRKSYLTEHMKLH 329
+ S S G +C +CS L H+ H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 38.7 bits (89), Expect = 0.004
Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 23/125 (18%)
Query: 307 NKCDLCSKEFSRKSYLTEHMKLH-QGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDL 365
+ S S+ G +C +CS +L H+ H G+ L
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH-GLHGNMTL 211
Query: 366 CS-------KEF--SWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQGITYK 416
S EF SW+ H ++ D+ +K+ + + + +L +T+
Sbjct: 212 TSSEIQRHITEFISSWQNHPI--------VQVSADVENKKTAQL-LHADTPRL---VTWD 259
Query: 417 CGLCS 421
GLC+
Sbjct: 260 AGLCT 264
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 37.6 bits (88), Expect = 3e-04
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 297 EHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQG 331
K C+ C K F+R +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 36.0 bits (84), Expect = 8e-04
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ + Y C+ C K F+ HLT H+K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 36.0 bits (84), Expect = 0.001
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQG 196
+ Y C+ C K F+ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 34.1 bits (79), Expect = 0.004
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 216 EHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQG 250
K C+ C K F+ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 34.1 bits (79), Expect = 0.004
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 243 EHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQG 277
K C+ C K F+ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 34.1 bits (79), Expect = 0.004
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 270 EHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQG 304
K C+ C K F+ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 34.1 bits (79), Expect = 0.004
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQG 223
K C+ C K F+ +LT H K+H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 32.9 bits (76), Expect = 0.010
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 324 EHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG 358
K C+ C K F+ +LT+H +H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 27.5 bits (62), Expect = 0.77
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 378 EHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG 412
D K C+ C K F+ LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 26.4 bits (59), Expect = 2.0
Identities = 7/28 (25%), Positives = 9/28 (32%), Gaps = 1/28 (3%)
Query: 405 EHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
Y C C K F+ +LT
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLT 29
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 37.1 bits (87), Expect = 3e-04
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCD 364
G K KCD+C K F +S L +H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 36.3 bits (85), Expect = 8e-04
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + +KCD+C K F +S L H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KCD+C K F +S L H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
+KCD+C K F + L H +H
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVH 35
Score = 34.0 bits (79), Expect = 0.005
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KCD+C K F +S L H +H K
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 33.6 bits (78), Expect = 0.006
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KCD+C K F +S L H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KCD+C K F +S L H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KCD+C K F +S L H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 27.1 bits (61), Expect = 1.4
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G +KC +C K F +S L
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLN 29
Score = 26.7 bits (60), Expect = 1.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
KCD+C K F + L H +H
Sbjct: 14 KCDICGKSFCGRSRLNRHSMVHTA 37
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 37.2 bits (87), Expect = 3e-04
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+CD C K FS K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 35.2 bits (82), Expect = 0.001
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K +CD C K FS K L H+++H G
Sbjct: 1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
G K +CD C K FS K +L H+ +H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 34.9 bits (81), Expect = 0.002
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +CD C K FS+K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 34.1 bits (79), Expect = 0.004
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +CD C K FS K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 34.1 bits (79), Expect = 0.004
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
G + Y+CD C K FS KG L H ++H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 33.7 bits (78), Expect = 0.005
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +CD C K FS K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 33.7 bits (78), Expect = 0.005
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +CD C K FS K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 26.8 bits (60), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
+CD C K FS K L H+++H G
Sbjct: 13 RCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 26.0 bits (58), Expect = 2.7
Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K FS K +L
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLI 28
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 37.1 bits (87), Expect = 4e-04
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C++C K F ++L H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 36.7 bits (86), Expect = 5e-04
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 297 EHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C++C K F ++L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 36.0 bits (84), Expect = 8e-04
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y C++C K F HL +H ++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 324 EHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCD 364
G K C++C K F ++L +H+ +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 34.8 bits (81), Expect = 0.002
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 270 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C++C K F ++L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 216 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C++C K F ++L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 243 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C++C K F ++L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K C++C K F ++L +H+++H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 27.1 bits (61), Expect = 1.2
Identities = 7/28 (25%), Positives = 10/28 (35%), Gaps = 1/28 (3%)
Query: 405 EHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y C +C K F ++L
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLN 29
Score = 26.7 bits (60), Expect = 1.9
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
C++C K F L +H+++H T
Sbjct: 14 SCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 36.7 bits (86), Expect = 4e-04
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K FS S L+ H K+H G K
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 36.0 bits (84), Expect = 0.001
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K FSR S L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K FS S L++H +H G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC+ C K FS L++H+K+H
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 34.0 bits (79), Expect = 0.005
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC+ C K FS S L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 33.6 bits (78), Expect = 0.006
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K FS S L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K FS S L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K FS S L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 26.7 bits (60), Expect = 1.8
Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K FS S L+
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLS 29
Score = 26.3 bits (59), Expect = 2.4
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K FS L++H K+H G
Sbjct: 14 KCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.8 bits (86), Expect = 5e-04
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C C K FS+KSYL HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C C K FS KSYL HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 34.1 bits (79), Expect = 0.004
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K C C K FS KS L HM H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.006
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C C K FSSKSYL HM+ H G K
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 33.7 bits (78), Expect = 0.007
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C C K FS+KSYL HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 33.3 bits (77), Expect = 0.007
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C C K FS+KSYL HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 33.3 bits (77), Expect = 0.007
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C C K FS+KSYL HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 31.4 bits (72), Expect = 0.040
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y C C K FS K +L H + H
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 26.7 bits (60), Expect = 1.7
Identities = 10/27 (37%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y C C K FS KS L
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLI 29
Score = 26.0 bits (58), Expect = 3.8
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
C C K FSSK L HM+ H G
Sbjct: 14 GCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.3 bits (85), Expect = 6e-04
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KCD+C K F + S+LT H +H G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKCD+C K F S LT H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
YKCD+C K F + LT H+++H
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIH 35
Score = 33.6 bits (78), Expect = 0.006
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KCD+C K F S LT H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 33.3 bits (77), Expect = 0.009
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KCD+C K F S LT H ++H G K
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 32.5 bits (75), Expect = 0.014
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KCD+C K F S LT H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 32.5 bits (75), Expect = 0.015
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KCD+C K F S LT H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 32.5 bits (75), Expect = 0.015
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KCD+C K F S LT H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 27.5 bits (62), Expect = 0.96
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC +C K F S+LT
Sbjct: 13 YKCDVCHKSFRYGSSLT 29
Score = 26.7 bits (60), Expect = 1.8
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KCD+C K F LT H ++H G
Sbjct: 14 KCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 36.4 bits (85), Expect = 6e-04
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G R ++C C K F S H ++H G K
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G R ++C C K F + +HR++H
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 34.0 bits (79), Expect = 0.004
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG 358
G + ++C C K F SN +H +H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 34.0 bits (79), Expect = 0.004
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G + ++C C K F + S +H ++H G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.010
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G + ++C C K F S +H ++H G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.011
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G + ++C C K F S +H ++H G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.011
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G + ++C C K F S +H ++H G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G + ++C C K F S +H ++H G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 26.3 bits (59), Expect = 2.5
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG 412
+ ++C C K F +H ++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 25.6 bits (57), Expect = 4.3
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 415 YKCGLCSKEFSCKSNLT 431
++C C K F SN
Sbjct: 13 HRCSDCGKFFLQASNFI 29
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 36.3 bits (85), Expect = 6e-04
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + +KC C K FS +S L H KLH G K
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C K FS +S L H LH G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + +KC C K FS + L H KLH
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 34.4 bits (80), Expect = 0.004
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K FSR+S L H KLH G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 32.5 bits (75), Expect = 0.015
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K FS +S L H KLH G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 32.5 bits (75), Expect = 0.015
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC C K FS +S L H KLH G K
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K FS +S L H KLH G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K FS +S L H KLH G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 27.1 bits (61), Expect = 1.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
+KC C K FS +S L
Sbjct: 13 FKCVECGKGFSRRSALN 29
Score = 25.9 bits (58), Expect = 3.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC C K FS + L H KLH G
Sbjct: 14 KCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 36.3 bits (85), Expect = 7e-04
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G++ Y C+ C K F +KSYL H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 32.8 bits (76), Expect = 0.011
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G+K C+ C K F KSYL H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G+K C+ C K F KS L H H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 32.1 bits (74), Expect = 0.020
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G+K C+ C K F SKSYL H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G+K C+ C K F +KSYL H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 31.7 bits (73), Expect = 0.026
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G+K C+ C K F +KSYL H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 31.7 bits (73), Expect = 0.026
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G+K C+ C K F +KSYL H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 31.7 bits (73), Expect = 0.032
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G++ Y C+ C K F K +L H + H
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 26.3 bits (59), Expect = 2.3
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKCG 418
C+ C K F SK L H + H G G
Sbjct: 14 VCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44
Score = 26.3 bits (59), Expect = 2.3
Identities = 8/17 (47%), Positives = 8/17 (47%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C C K F KS L
Sbjct: 13 YVCNECGKAFRSKSYLI 29
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.4 bits (85), Expect = 7e-04
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K +++K L H K+H G +
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K ++ K NL H +H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC+ C K ++ K +L H+K+H
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 32.5 bits (75), Expect = 0.015
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K ++ K L H K+H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K ++SK L H K+H G +
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K +++K L H K+H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 31.7 bits (73), Expect = 0.030
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K +++K L H K+H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 31.7 bits (73), Expect = 0.030
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K +++K L H K+H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 27.5 bits (62), Expect = 0.92
Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K ++ K NL
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLD 29
Score = 25.6 bits (57), Expect = 5.2
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K ++SK L H K+H G
Sbjct: 14 KCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 36.2 bits (84), Expect = 7e-04
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLH 194
+ G++ ++C C + FS +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 35.8 bits (83), Expect = 9e-04
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLH 329
+ G+K +C C + FSR +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 35.4 bits (82), Expect = 0.001
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
GI+ ++C C + FS HL HRK H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.1 bits (76), Expect = 0.009
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLH 248
+ GIK +C C + FS +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.1 bits (76), Expect = 0.009
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLH 275
+ GIK +C C + FS +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.1 bits (76), Expect = 0.009
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLH 302
+ GIK +C C + FS +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 32.3 bits (74), Expect = 0.014
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLH 221
+ G+K +C C + FS +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.5 bits (72), Expect = 0.027
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLH 356
+ GIK +C C + FS +L H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.4 bits (56), Expect = 4.1
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 389 KCDLCSKEFSSKRILTEHMKLH 410
+C C + FS L H K H
Sbjct: 13 QCPDCDRSFSRSDHLALHRKRH 34
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.9 bits (84), Expect = 8e-04
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + +KC+ C K F+ S LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F+ S+LT H +H G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F++ S LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 34.0 bits (79), Expect = 0.004
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F+ S LT H ++H G K
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F+ S LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F+ S LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F+ S LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 33.3 bits (77), Expect = 0.007
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + +KC+ C K F+ LT H+++H
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 27.5 bits (62), Expect = 0.92
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G +KC C K F+ S+LT
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLT 29
Score = 26.3 bits (59), Expect = 2.6
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
KC+ C K F+ LT H ++H G
Sbjct: 14 KCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 36.0 bits (84), Expect = 8e-04
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G + C+ C K F R S+L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G R Y C+ C K F S+L H+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G R Y C+ C K F HL EH K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 33.3 bits (77), Expect = 0.010
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G + C+ C K F S+L +H+ H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.9 bits (76), Expect = 0.011
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G + C+ C K F S+L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 32.1 bits (74), Expect = 0.019
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G + C+ C K F S+L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 32.1 bits (74), Expect = 0.020
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G + C+ C K F S+L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 32.1 bits (74), Expect = 0.020
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G + C+ C K F S+L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 26.3 bits (59), Expect = 2.7
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
C+ C K F L EH+K H +
Sbjct: 14 GCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 36.0 bits (84), Expect = 8e-04
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
GV+ Y C C+K FS KS L H + H G+K
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 33.7 bits (78), Expect = 0.007
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G+K C C+K FS KS L H H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 32.5 bits (75), Expect = 0.014
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G+K C C+K FS KS L H + H G+K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 32.1 bits (74), Expect = 0.020
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G++ Y C C+K FS K L H++ H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 31.3 bits (72), Expect = 0.041
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G+K C C+K FS KS L H + H G+K
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 31.3 bits (72), Expect = 0.043
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G+K C C+K FS KS L H + H G+K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 31.3 bits (72), Expect = 0.044
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G+K C C+K FS KS L H + H G+K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 31.3 bits (72), Expect = 0.044
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G+K C C+K FS KS L H + H G+K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 27.1 bits (61), Expect = 1.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C C+K FS KS L
Sbjct: 13 YGCSQCAKTFSLKSQLI 29
Score = 24.8 bits (55), Expect = 8.5
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
C C+K FS K L H + H G
Sbjct: 14 GCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 36.0 bits (84), Expect = 8e-04
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + +KC C K ++ + +LT H ++H G K
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + +KC C K ++ + HLT+H+++H
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 33.6 bits (78), Expect = 0.005
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K ++++ +LT+H ++H G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 33.6 bits (78), Expect = 0.006
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C K ++ + +LT+H +H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.025
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K ++ + +LT+H ++H G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 31.7 bits (73), Expect = 0.025
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC C K ++ + +LT+H ++H G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K ++ + +LT+H ++H G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K ++ + +LT+H ++H G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 26.3 bits (59), Expect = 2.4
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 415 YKCGLCSKEFSCKSNLT 431
+KCG C K ++ + +LT
Sbjct: 13 FKCGECGKSYNQRVHLT 29
Score = 25.2 bits (56), Expect = 6.5
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC C K ++ + LT+H ++H G
Sbjct: 14 KCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.0 bits (84), Expect = 9e-04
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K FS S L H ++H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K FS S L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.006
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC+ C K FS L H+++H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 33.6 bits (78), Expect = 0.006
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K FS+ S L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC+ C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.020
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.021
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.021
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 25.9 bits (58), Expect = 3.7
Identities = 10/27 (37%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K FS S L
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLA 29
Score = 25.2 bits (56), Expect = 6.0
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K FS L H ++H G
Sbjct: 14 KCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
+ C C K FS+KSYL H + H K
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 33.7 bits (78), Expect = 0.005
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
C C K FS KSYL H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 33.3 bits (77), Expect = 0.008
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK 306
C C K FS+KSYL H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 32.9 bits (76), Expect = 0.011
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK 225
C C K FSSKSYL H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 32.9 bits (76), Expect = 0.011
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK 252
C C K FS+KSYL H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 32.9 bits (76), Expect = 0.011
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK 279
C C K FS+KSYL H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 32.5 bits (75), Expect = 0.014
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
+ C C K FS K +L H++ H
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTH 33
Score = 31.7 bits (73), Expect = 0.025
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
C C K FS KS L H H +
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 26.7 bits (60), Expect = 1.7
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
C C K FSSK L H + H
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 26.3 bits (59), Expect = 2.2
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
+ C C K FS KS L
Sbjct: 11 FGCSCCEKAFSSKSYLL 27
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.0 bits (84), Expect = 0.001
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C+ C K F S L H ++H G K
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K C+ C K F H S L +H +H G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.005
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y C+ C K F L EH+++H
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 33.7 bits (78), Expect = 0.006
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C+ C K F S L EH ++H G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C+ C K F S L EH ++H G K
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C+ C K F S L EH ++H G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C+ C K F S L EH ++H G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C+ C K F S L EH ++H G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 26.3 bits (59), Expect = 2.2
Identities = 8/27 (29%), Positives = 8/27 (29%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y C C K F S L
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQ 29
Score = 24.8 bits (55), Expect = 7.7
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
C+ C K F L EH ++H G
Sbjct: 14 NCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.9 bits (84), Expect = 0.001
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C +C K FS + L+ H ++H G K
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C +C K FSH+ +L+ H +H G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 33.3 bits (77), Expect = 0.008
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C +C K FS + L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C +C K FS + L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 31.7 bits (73), Expect = 0.026
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K +C +C K FS + L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 31.7 bits (73), Expect = 0.026
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C +C K FS + L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 31.7 bits (73), Expect = 0.026
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C +C K FS + L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 31.7 bits (73), Expect = 0.033
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C +C K FS + L+ H+++H
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 26.7 bits (60), Expect = 2.0
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C +C K FS + +L+
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLS 29
Score = 25.2 bits (56), Expect = 7.3
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C +C K FS ++ L+ H ++H G
Sbjct: 14 ECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C+ C K FS +S LT H +H G K
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C+ C K FS +S+LT H +H G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 33.3 bits (77), Expect = 0.009
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C+ C K FS +S LT H +H G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C+ C K FS + LT H+ +H
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 32.5 bits (75), Expect = 0.017
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K +C+ C K FS +S LT H +H G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C+ C K FS +S LT H +H G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 31.7 bits (73), Expect = 0.025
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C+ C K FS +S LT H +H G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 31.7 bits (73), Expect = 0.025
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C+ C K FS +S LT H +H G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 26.7 bits (60), Expect = 1.8
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K FS +S+LT
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLT 29
Score = 26.0 bits (58), Expect = 3.3
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C+ C K FS + LT H +H G
Sbjct: 14 ECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C C K F KS L H ++H G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 34.1 bits (79), Expect = 0.004
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C C K F KS L H +H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 32.9 bits (76), Expect = 0.010
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C C K F +KS L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C C K F K L H+++H
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 31.7 bits (73), Expect = 0.028
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C C K F KS L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 31.7 bits (73), Expect = 0.028
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C C K F KS L H ++H G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 31.7 bits (73), Expect = 0.031
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C C K F KS L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 31.7 bits (73), Expect = 0.031
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C C K F KS L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 27.1 bits (61), Expect = 1.3
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K F KS L
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLH 29
Score = 24.8 bits (55), Expect = 8.3
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C C K F K L H ++H G
Sbjct: 14 ECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
GV+ Y C+ C K FS S LT H +H G K
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G+K C+ C K FS S+LT H +H G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.008
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G+K C+ C K FS S LT H +H G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 32.5 bits (75), Expect = 0.014
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G++ Y C+ C K FS LT H+ +H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 32.5 bits (75), Expect = 0.017
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G+K C+ C K FS S LT H +H G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 32.5 bits (75), Expect = 0.018
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G+K C+ C K FS S LT H +H G K
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 32.1 bits (74), Expect = 0.019
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G+K C+ C K FS S LT H +H G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 32.1 bits (74), Expect = 0.019
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G+K C+ C K FS S LT H +H G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 27.5 bits (62), Expect = 0.87
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G+ Y C C K FS S+LT
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLT 29
Score = 25.9 bits (58), Expect = 3.3
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
C+ C K FS LT H +H G
Sbjct: 14 MCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F+ S+L H ++H G+K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC+ C K F+ HL H+++H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 33.3 bits (77), Expect = 0.008
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F++ S+L H ++H G+K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 32.9 bits (76), Expect = 0.010
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F+ S+L H +H G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 31.7 bits (73), Expect = 0.029
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F+ S+L H ++H G+K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 31.3 bits (72), Expect = 0.036
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F+ S+L H ++H G+K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 31.3 bits (72), Expect = 0.038
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F+ S+L H ++H G+K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 31.3 bits (72), Expect = 0.038
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F+ S+L H ++H G+K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 25.6 bits (57), Expect = 5.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC C K F+ S+L
Sbjct: 13 YKCNECGKVFTQNSHLA 29
Score = 24.8 bits (55), Expect = 9.5
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K F+ L H ++H G+
Sbjct: 14 KCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G R Y+C C K F TKS L H + H G K
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 34.1 bits (79), Expect = 0.004
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G + +C C K F KS+L H H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.015
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G R Y+C C K F K L HR+ H
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 32.5 bits (75), Expect = 0.015
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G + +C C K F KS L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 31.4 bits (72), Expect = 0.036
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G + +C C K F TKS L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 31.4 bits (72), Expect = 0.040
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G + +C C K F TKS L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 31.4 bits (72), Expect = 0.040
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G + +C C K F TKS L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 31.4 bits (72), Expect = 0.040
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G + +C C K F +KS L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 26.0 bits (58), Expect = 3.6
Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K F KS+L
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLI 29
Score = 24.8 bits (55), Expect = 8.1
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C C K F +K L H + H G
Sbjct: 14 ECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC C K F+ KS L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 35.2 bits (82), Expect = 0.001
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C K F+ KS L H H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC C K F+WK L H+K H
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 32.9 bits (76), Expect = 0.010
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K F+ KS L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC C K F+ KS L H K H G +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K F+ KS L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K F+ KS L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K F+ KS L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 27.5 bits (62), Expect = 1.1
Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K F+ KS L
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLR 29
Score = 25.2 bits (56), Expect = 6.1
Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
KC C K F+ K L H K H G
Sbjct: 14 KCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G R Y+C C K F+ KS L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 34.0 bits (79), Expect = 0.004
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 324 EHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G ++ +C C K F+ KS L H +H G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.005
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 297 EHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G ++ +C C K F+RKS L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G R Y+C C K F+ K L H+++H
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 270 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G ++ +C C K F+ KS L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 216 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G ++ +C C K F+ KS L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 243 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G ++ +C C K F+ KS L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.040
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G ++ +C C K F+ KS L H ++H G K
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 26.3 bits (59), Expect = 3.0
Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 405 EHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K F+ KS L
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLI 29
Score = 25.2 bits (56), Expect = 7.4
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C C K F+ K L H ++H G
Sbjct: 14 ECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + + CD C K F S L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 34.9 bits (81), Expect = 0.002
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG 358
G K + CD C K F + S L H +H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 33.3 bits (77), Expect = 0.008
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K + CD C K F S L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 32.6 bits (75), Expect = 0.013
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K + CD C K F S L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 32.6 bits (75), Expect = 0.014
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K + CD C K F S L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 32.6 bits (75), Expect = 0.014
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K + CD C K F S L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 32.6 bits (75), Expect = 0.014
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K + CD C K F S L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 31.4 bits (72), Expect = 0.039
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + + CD C K F + L H+++H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 25.2 bits (56), Expect = 5.7
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG 412
K + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 25.2 bits (56), Expect = 6.2
Identities = 7/27 (25%), Positives = 9/27 (33%), Gaps = 1/27 (3%)
Query: 406 HMKLHQG-ITYKCGLCSKEFSCKSNLT 431
G ++ C C K F S L
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALR 29
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + ++C C K FS S L H ++H G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K ++C C K FS S L H +H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 33.3 bits (77), Expect = 0.007
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + ++C C K FS+ L H+++H
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 32.9 bits (76), Expect = 0.010
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K ++C C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K ++C C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 31.7 bits (73), Expect = 0.026
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K ++C C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K ++C C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K ++C C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 26.7 bits (60), Expect = 1.7
Identities = 8/27 (29%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G ++C C K FS S L
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLI 29
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F+ S+L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 33.6 bits (78), Expect = 0.006
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC+ C K F+ HL HR +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 32.9 bits (76), Expect = 0.012
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F++ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F+ S+L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.031
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F+ S+L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 31.3 bits (72), Expect = 0.047
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 30.9 bits (71), Expect = 0.050
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 30.9 bits (71), Expect = 0.050
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +CD+C K FSH ++LT+H +H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+CD+C K FS + LT H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 33.2 bits (77), Expect = 0.008
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +CD+C K FS + LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 32.1 bits (74), Expect = 0.020
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K +CD+C K FS + LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+CD+C K FS LT+H+++H
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 32.1 bits (74), Expect = 0.025
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +CD+C K FS + LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 31.7 bits (73), Expect = 0.028
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +CD+C K FS + LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 31.7 bits (73), Expect = 0.028
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +CD+C K FS + LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 26.3 bits (59), Expect = 2.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C +C K FS ++LT
Sbjct: 13 YECDVCRKAFSHHASLT 29
Score = 25.2 bits (56), Expect = 5.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
+CD+C K FS LT+H ++H G
Sbjct: 14 ECDVCRKAFSHHASLTQHQRVHSG 37
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + ++C+ C K+F+ S+L +H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 33.7 bits (78), Expect = 0.005
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 297 EHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C+ C K F++ S+L H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 33.7 bits (78), Expect = 0.006
Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + ++C+ C K F+ HL H+++H
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 32.9 bits (76), Expect = 0.011
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 324 EHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C+ C K F+ S+L H +H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 270 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C+ C K F+ S+L H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 216 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C+ C K F+ S+L H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 243 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C+ C K F+ S+L H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 31.7 bits (73), Expect = 0.028
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K +C+ C K F+ S+L H ++H G K
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 25.2 bits (56), Expect = 5.7
Identities = 7/28 (25%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 405 EHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G ++C C K F+ S+L
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLH 29
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 35.5 bits (83), Expect = 0.001
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C+ C K F+TKS L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C+ C K F+ KSNL H H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 32.5 bits (75), Expect = 0.013
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C+ C K F+ KS L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 31.7 bits (73), Expect = 0.026
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C+ C K F+TKS L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 31.7 bits (73), Expect = 0.028
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C+ C K F+TKS L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 31.7 bits (73), Expect = 0.028
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C+ C K F+TKS L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 31.7 bits (73), Expect = 0.031
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y+C+ C K F+ K +L H++ H
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTH 35
Score = 31.3 bits (72), Expect = 0.038
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C+ C K F++KS L H + H G
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 28.2 bits (64), Expect = 0.49
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C C K F+ KSNL
Sbjct: 13 YECNECQKAFNTKSNLM 29
Score = 26.7 bits (60), Expect = 1.6
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKCG 418
+C+ C K F++K L H + H G G
Sbjct: 14 ECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 35.5 bits (83), Expect = 0.001
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
+ YKC+ C K ++ + L H ++H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
K KC+ C K ++ + NL H +H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 8/33 (24%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ + YKC+ C K ++ + +L H+++H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 34.4 bits (80), Expect = 0.003
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
K KC+ C K ++R+ L H ++H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 32.9 bits (76), Expect = 0.011
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ K KC+ C K ++ + L H ++H G K
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 32.5 bits (75), Expect = 0.014
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
K KC+ C K ++ + L H ++H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 32.5 bits (75), Expect = 0.015
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
K KC+ C K ++ + L H ++H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 32.5 bits (75), Expect = 0.015
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
K KC+ C K ++ + L H ++H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 26.7 bits (60), Expect = 1.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC C K ++ + NL
Sbjct: 13 YKCEDCGKGYNRRLNLD 29
Score = 26.7 bits (60), Expect = 2.1
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
KC+ C K ++ + L H ++H G T
Sbjct: 14 KCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.001
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G R Y+C C K F KS L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 34.0 bits (79), Expect = 0.005
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 324 EHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G ++ +C C K F KS L+ H +H+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.008
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 297 EHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G ++ +C C K F +KS L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 32.1 bits (74), Expect = 0.021
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 270 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G ++ +C C K F KS L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G R Y+C C K F K L+ H+++H
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 216 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G ++ +C C K F KS L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 243 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G ++ +C C K F KS L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 31.3 bits (72), Expect = 0.040
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G ++ +C C K F KS L+ H ++H+G K
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 26.7 bits (60), Expect = 2.0
Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 1/28 (3%)
Query: 405 EHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K F KS L+
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLS 29
Score = 24.8 bits (55), Expect = 9.4
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 378 EHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
++ +C C K F K L+ H ++H+G
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 40.2 bits (93), Expect = 0.001
Identities = 55/448 (12%), Positives = 127/448 (28%), Gaps = 111/448 (24%)
Query: 33 TVEVSKECKDPK-KVANIFNLHYIKVGS-----SLSENGTHRTAVMELNVEESEDHVGLS 86
T C K + F + ++ + + ++ E ++ N DH S
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH---S 220
Query: 87 PPLYDPSRVIKHEPLDIPYEVIVKEEYYEG----DNINVEDNDLNDA---------VTRD 133
+ I+ E + + + Y NV++ +A TR
Sbjct: 221 SNIKLRIHSIQAELRRL----LKSKPYENCLLVLL--NVQNAKAWNAFNLSCKILLTTRF 274
Query: 134 C--LEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTK-SYLTAH 190
+F + + DH ++ +K L K + L
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLT----PDEVK---------SLLLKYLDCRPQDLPRE 321
Query: 191 MKLHQGLKNKCDLCSKEFS-----SKSYLT-EHMKLHQGIKNKCD-LCSKEFSTKSY--- 240
+ + + ++ ++ KL I++ + L E+ K +
Sbjct: 322 VLTTNPR--RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-KMFDRL 378
Query: 241 --LTEHMKL---------HQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEF 289
+ IK+ + + S + + K ++ + S
Sbjct: 379 SVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK-----ESTISIPSIYL 433
Query: 290 STKSYLTEHMKLHQGLKNK----CDLCSKEFSRK---SYLTEHMKLHQGIKNKCDLCSKE 342
K L LH+ + + S + Y H+ H L + E
Sbjct: 434 ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH--------LKNIE 485
Query: 343 FSHKSNLTKH--MNLH---QGIRYKCDLCSKEFS----------WKGHLTEHRKLHQDIK 387
+ L + ++ Q IR+ + S +K ++ ++ ++ +
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 388 NKCDLCSKEF----SSKRILTEHMKLHQ 411
N + +F I +++ L +
Sbjct: 546 N--AI--LDFLPKIEENLICSKYTDLLR 569
Score = 36.8 bits (84), Expect = 0.018
Identities = 40/227 (17%), Positives = 71/227 (31%), Gaps = 57/227 (25%)
Query: 6 LFEMRFTYPRA--IPKKT-----GDPISIKVDNETVEVSKEC---KDPKKVANIFNLH-- 53
+F+ +P + IP D I V ++ K K PK+ + ++
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE--STISIPSI 431
Query: 54 YIKVGSSLSENGT-HRTAVMELNVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEE 112
Y+++ L HR+ V N+ ++ D L PP D H I + + E
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD-QYFYSH----IGHHLKNIEH 486
Query: 113 YYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSD----HERRSI--------NYKCQ 160
E L V D F + K++ D + SI YK
Sbjct: 487 P--------ERMTLFRMVFLD-FRFLEQ----KIRHDSTAWNASGSILNTLQQLKFYK-- 531
Query: 161 EKHMKLHQGV--RYKCDLCSKKF----STKSYLTAHMKLHQ-GLKNK 200
++ + R + F + + L + L +
Sbjct: 532 -PYICDNDPKYERLVNAI--LDFLPKIEENLICSKYTDLLRIALMAE 575
Score = 34.4 bits (78), Expect = 0.088
Identities = 42/243 (17%), Positives = 85/243 (34%), Gaps = 52/243 (21%)
Query: 101 LDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKS-DHERRSINYKC 159
D+P ++ KEE D+I + + ++ T S + V+ E INYK
Sbjct: 39 QDMPKSILSKEEI---DHIIMSKDAVSG--TLRLFWTLLSKQEEMVQKFVEEVLRINYKF 93
Query: 160 QEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMK 219
L ++ + T+ Y+ +L+ N + +K S+ L ++K
Sbjct: 94 ------LMSPIKTEQR--QPSMMTRMYIEQRDRLY----NDNQVFAKYNVSR--LQPYLK 139
Query: 220 LHQGIKNKCDLCSKEF--------STKSYLTEHMKLHQGIKNKCD-----LCSKEFSTKS 266
L Q + L + S K+++ + L ++ K D L K ++
Sbjct: 140 LRQALLE---LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 267 YLTEHMK--LHQGIKNKCDLCSKEF-------STKSYLTEHMKLHQGLKNKC-----DLC 312
+ E ++ L+Q N S ++ L +K C ++
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP--YENCLLVLLNVQ 254
Query: 313 SKE 315
+ +
Sbjct: 255 NAK 257
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.001
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C+ C K FS S L H ++H G K
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 34.0 bits (79), Expect = 0.004
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C+ C K FS S L +H +H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.008
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C+ C K FS L H+++H
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 32.5 bits (75), Expect = 0.014
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C+ C K FS+ S L H ++H G K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 31.7 bits (73), Expect = 0.032
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C+ C K FS S L H ++H G K
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 31.4 bits (72), Expect = 0.046
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C+ C K FS S L H ++H G K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.048
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C+ C K FS S L H ++H G K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.048
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C+ C K FS S L H ++H G K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 25.6 bits (57), Expect = 4.7
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C C K FS S L
Sbjct: 13 YQCNECGKAFSQTSKLA 29
Score = 25.2 bits (56), Expect = 7.6
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
+C+ C K FS L H ++H G
Sbjct: 14 QCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C +C K F+ KS L H ++H G K
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 33.7 bits (78), Expect = 0.005
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C +C K F+ KS L H +H G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.011
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C +C K F++KS L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 31.7 bits (73), Expect = 0.032
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C +C K F+ KS L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 31.7 bits (73), Expect = 0.034
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C +C K F+ K L H+++H
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 31.4 bits (72), Expect = 0.035
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C +C K F+ KS L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 31.4 bits (72), Expect = 0.035
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C +C K F+ KS L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 31.4 bits (72), Expect = 0.036
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K +C +C K F+ KS L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 27.1 bits (61), Expect = 1.2
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C +C K F+ KS L
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLH 29
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C +CSK F+ K++L H K H G K
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 33.3 bits (77), Expect = 0.007
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C +CSK F+ K HL +H+K H
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 32.9 bits (76), Expect = 0.012
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C +CSK F++K++L +H K H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 32.5 bits (75), Expect = 0.018
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C +CSK F+ K++L +H H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.030
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C +CSK F+ K++L +H K H G K
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 31.3 bits (72), Expect = 0.041
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C +CSK F+ K++L +H K H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 31.3 bits (72), Expect = 0.043
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C +CSK F+ K++L +H K H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 31.3 bits (72), Expect = 0.043
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C +CSK F+ K++L +H K H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 24.8 bits (55), Expect = 9.0
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C +CSK F+ K++L
Sbjct: 13 YECKVCSKAFTQKAHLA 29
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F H S L++H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F SYL+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 34.0 bits (79), Expect = 0.004
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F SYL+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.010
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F SYL+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.011
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F SYL+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.011
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F SYL+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.012
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC+ C K F SYL+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.012
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
YKC+ C K F +L+ H+++H
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIH 35
Score = 26.3 bits (59), Expect = 2.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC C K F S L+
Sbjct: 13 YKCNECGKVFRHNSYLS 29
Score = 25.2 bits (56), Expect = 5.7
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K F L+ H ++H G
Sbjct: 14 KCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C+ C K F KS L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 33.7 bits (78), Expect = 0.006
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C+ C K F KS L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 33.7 bits (78), Expect = 0.007
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C+ C K F WK L H + H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 33.3 bits (77), Expect = 0.009
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG 358
G K +C+ C K F KS L H H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 33.3 bits (77), Expect = 0.009
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C+ C K F KS L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 33.3 bits (77), Expect = 0.009
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C+ C K F KS L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 32.9 bits (76), Expect = 0.012
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C+ C K F KS L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 32.5 bits (75), Expect = 0.015
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C+ C K F KS L H + H G+
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 27.1 bits (61), Expect = 1.3
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K F KS L
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLI 29
Score = 25.2 bits (56), Expect = 7.0
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKCG 418
+C+ C K F K +L H + H G++ G
Sbjct: 14 ECNECGKAFIWKSLLIVHERTHAGVSGPSSG 44
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C C K F+ +S L H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K C C K F+ +SNL KH +H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 33.3 bits (77), Expect = 0.009
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C C K F+ +S L +H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 32.9 bits (76), Expect = 0.012
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y C C K F+ + +L +H+K+H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 32.5 bits (75), Expect = 0.017
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C C K F+ +S L +H K+H K
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C C K F+ +S L +H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C C K F+ +S L +H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C C K F+ +S L +H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 26.7 bits (60), Expect = 1.7
Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y C C K F+ +SNL
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLI 29
Score = 24.8 bits (55), Expect = 9.0
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
C C K F+ + L +H K+H
Sbjct: 14 ICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G C C K F+HK+NL H +H G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 33.6 bits (78), Expect = 0.006
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + C C K F+ K+ L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 31.7 bits (73), Expect = 0.030
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + C C K F+ K +L H+K+H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 31.7 bits (73), Expect = 0.032
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G C C K F+ K+ L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 30.5 bits (70), Expect = 0.074
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G C C K F+ K+ L H K+H G +
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 30.5 bits (70), Expect = 0.077
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G C C K F+ K+ L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 30.5 bits (70), Expect = 0.083
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G C C K F+ K+ L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 30.5 bits (70), Expect = 0.083
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G C C K F+ K+ L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 26.7 bits (60), Expect = 2.0
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQG-ITYKCGLCSKEFSCKSNLT 431
G + C C K F+ K+NL
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLI 29
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F + +L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 32.9 bits (76), Expect = 0.010
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
YKC+ C K F + L H +H
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVH 35
Score = 32.9 bits (76), Expect = 0.013
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 32.1 bits (74), Expect = 0.021
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F + L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 31.4 bits (72), Expect = 0.038
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 31.4 bits (72), Expect = 0.040
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 31.4 bits (72), Expect = 0.040
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 27.9 bits (63), Expect = 0.60
Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K F C+ +L
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLY 29
Score = 25.6 bits (57), Expect = 5.2
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K F +R L H +H G
Sbjct: 14 KCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C+ C K F KS+L H ++H G K
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.005
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y C+ C K F K HL HR++H
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 32.9 bits (76), Expect = 0.011
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C+ C K F +KS+L H ++H G K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K C+ C K F KS+L +H +H G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.037
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C+ C K F KS+L H ++H G K
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.054
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C+ C K F KS+L H ++H G K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.058
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C+ C K F KS+L H ++H G K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.058
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C+ C K F KS+L H ++H G K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 24.8 bits (55), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C C K F KS+L
Sbjct: 13 YICNECGKSFIQKSHLN 29
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G + C +C K F+ +SNL KH +H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.004
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G R Y C +C K F+ +S L H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.020
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G + C +C K F+ +S L +H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y C +C K F+ + +L +H+K+H
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIH 35
Score = 30.9 bits (71), Expect = 0.050
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G + C +C K F+ +S L +H K+H G K
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 30.9 bits (71), Expect = 0.052
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G + C +C K F+ +S L +H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 30.9 bits (71), Expect = 0.056
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G + C +C K F+ +S L +H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 30.9 bits (71), Expect = 0.056
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G + C +C K F+ +S L +H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 27.1 bits (61), Expect = 1.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C +C K F+ +SNL
Sbjct: 13 YICTVCGKAFTDRSNLI 29
Score = 25.5 bits (57), Expect = 4.8
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
C +C K F+ + L +H K+H G
Sbjct: 14 ICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + +KC C K F +L +H+++H G K
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + +KC C K F HL H ++H
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 33.2 bits (77), Expect = 0.008
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K F + +L H+++H G K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 33.2 bits (77), Expect = 0.009
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C K F +L H+ +H G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.038
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC C K F +L H+++H G K
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.042
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K F +L H+++H G K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.045
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K F +L H+++H G K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.045
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K F +L H+++H G K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 24.8 bits (55), Expect = 9.9
Identities = 7/27 (25%), Positives = 9/27 (33%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G +KC C K F +L
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLA 29
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C+ C K FS KS L+AH + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 34.0 bits (79), Expect = 0.004
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K C+ C K FS KS L+ H H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C+ C K FS+KS L+ H + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C+ C K FS KS L+ H + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y C+ C K FS K L+ H++ H
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTH 35
Score = 32.5 bits (75), Expect = 0.017
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C+ C K FS KS L+ H + H G K
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C+ C K FS KS L+ H + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C+ C K FS KS L+ H + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 26.0 bits (58), Expect = 3.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C C K FS KS L+
Sbjct: 13 YGCNECGKTFSQKSILS 29
Score = 25.6 bits (57), Expect = 4.3
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
C+ C K FS K IL+ H + H G
Sbjct: 14 GCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKCD+C K+FS S+L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
YKCD+C KEFS HL H+++H
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVH 35
Score = 34.8 bits (81), Expect = 0.003
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KCD+C KEFS S+L H +H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KCD+C KEFS+ S+L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 32.9 bits (76), Expect = 0.011
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KCD+C KEFS S+L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KCD+C KEFS S+L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 32.5 bits (75), Expect = 0.013
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KCD+C KEFS S+L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 32.5 bits (75), Expect = 0.013
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KCD+C KEFS S+L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 26.3 bits (59), Expect = 2.3
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC +C KEFS S+L
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQ 29
Score = 26.0 bits (58), Expect = 3.7
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KCD+C KEFS L H ++H G
Sbjct: 14 KCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + + C C K FS L H ++H G K
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 34.0 bits (79), Expect = 0.005
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K C C K FS L +H +H G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.010
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + + C C K FS L +HR++H
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 32.9 bits (76), Expect = 0.013
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C C K FS L +H ++H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.030
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C C K FS L +H ++H G K
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.034
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C C K FS L +H ++H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.037
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C C K FS L +H ++H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.037
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C C K FS L +H ++H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 26.3 bits (59), Expect = 2.8
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 415 YKCGLCSKEFSCKSNLT 431
+ C C K FS L
Sbjct: 13 FDCIDCGKAFSDHIGLN 29
Score = 25.2 bits (56), Expect = 6.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
C C K FS L +H ++H G
Sbjct: 14 DCIDCGKAFSDHIGLNQHRRIHTG 37
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + ++C C K FS S L H ++H G K
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 33.2 bits (77), Expect = 0.007
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C C K FS S L H +H G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.011
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + ++C C K FS L H+++H
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 32.5 bits (75), Expect = 0.016
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.051
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.051
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K +C C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.054
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.054
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C C K FS S L H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 26.7 bits (60), Expect = 1.8
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
++C C K FS S L
Sbjct: 13 FECAECGKSFSISSQLA 29
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C K F S+ T+H LH G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 34.9 bits (81), Expect = 0.002
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC C K F S T H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 33.7 bits (78), Expect = 0.006
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K F S T+H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 32.9 bits (76), Expect = 0.010
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC C K F S T+H +LH G +
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 32.2 bits (74), Expect = 0.020
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K F S T+H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 32.2 bits (74), Expect = 0.021
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC C K F T+H++LH
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 32.2 bits (74), Expect = 0.021
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K F S T+H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 32.2 bits (74), Expect = 0.021
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K F S T+H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 26.0 bits (58), Expect = 3.0
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC C K F T+H +LH G
Sbjct: 14 KCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 26.0 bits (58), Expect = 3.0
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K F S+ T
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCT 29
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F+ S+L H ++H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 33.6 bits (78), Expect = 0.005
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC+ C K F+ HL HR++H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 32.9 bits (76), Expect = 0.012
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F++ S+L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F+ S+L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 31.7 bits (73), Expect = 0.032
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F+ S+L H ++H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 31.0 bits (71), Expect = 0.051
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F+ S+L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 31.0 bits (71), Expect = 0.054
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F+ S+L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 31.0 bits (71), Expect = 0.054
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F+ S+L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G R +KC+ C K F +S+L H++LH K
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G R +KC+ C K F + HL H +LH
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 34.0 bits (79), Expect = 0.004
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G + KC+ C K F R+S+L H++LH K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 32.1 bits (74), Expect = 0.020
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G + KC+ C K F +S+L H+ LH +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 32.1 bits (74), Expect = 0.022
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G + KC+ C K F +S+L H++LH K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G + KC+ C K F +S+L H++LH K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G + KC+ C K F +S+L H++LH K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 31.7 bits (73), Expect = 0.026
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G + KC+ C K F +S+L H++LH K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 25.6 bits (57), Expect = 5.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
KC+ C K F + L H++LH
Sbjct: 14 KCNECGKGFGRRSHLAGHLRLHSR 37
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC C K + + L H ++H G K
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 34.0 bits (79), Expect = 0.005
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC C K + + L H+++H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 33.7 bits (78), Expect = 0.006
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCD 364
G K KC C K + + +L H +H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 33.3 bits (77), Expect = 0.009
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K + R+ L H ++H G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.040
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC C K + + L H ++H G K
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.046
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K + + L H ++H G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.049
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K + + L H ++H G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.049
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K + + L H ++H G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 26.0 bits (58), Expect = 3.8
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC C K + + +L
Sbjct: 13 YKCVECGKGYKRRLDLD 29
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC C K F HL EHR++H
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC C K F ++L H ++H G +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K F R ++L EH ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 33.6 bits (78), Expect = 0.006
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C K F ++L +H +H G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 32.5 bits (75), Expect = 0.017
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC C K F ++L EH ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 32.1 bits (74), Expect = 0.022
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K F ++L EH ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K F ++L EH ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K F ++L EH ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 25.1 bits (56), Expect = 6.9
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC C K F L EH ++H G
Sbjct: 14 KCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 25.1 bits (56), Expect = 6.9
Identities = 8/27 (29%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K F ++L
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLN 29
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F+ S+LT H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 34.0 bits (79), Expect = 0.005
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F+ S+LT H +H G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.006
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F++ S+LT H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.010
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
YKC+ C K F+ HLT H ++H
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIH 35
Score = 32.5 bits (75), Expect = 0.016
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F+ S+LT H ++H G K
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F+ S+LT H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F+ S+LT H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F+ S+LT H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 25.5 bits (57), Expect = 4.9
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K F+ S+LT
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLT 29
Score = 25.5 bits (57), Expect = 5.1
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K F+ LT H ++H G
Sbjct: 14 KCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC C K F+ KS L H + H G +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 34.0 bits (79), Expect = 0.004
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C K F+ KS L H H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 32.9 bits (76), Expect = 0.011
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K F+RKS L H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 32.5 bits (75), Expect = 0.016
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC C K F+ K L H++ H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 31.7 bits (73), Expect = 0.033
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K F+ KS L H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 31.3 bits (72), Expect = 0.035
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K F+ KS L H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 31.3 bits (72), Expect = 0.035
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K F+ KS L H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 31.3 bits (72), Expect = 0.043
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC C K F+ KS L H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 27.1 bits (61), Expect = 1.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC C K F+ KS L
Sbjct: 13 YKCSDCGKAFTRKSGLH 29
Score = 25.5 bits (57), Expect = 4.3
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
KC C K F+ K L H + H G
Sbjct: 14 KCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F SNLT H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F S LT H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 33.3 bits (77), Expect = 0.008
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC+ C K F +LT H+ +H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 33.3 bits (77), Expect = 0.008
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F S LT H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 32.1 bits (74), Expect = 0.021
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F S LT H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 32.1 bits (74), Expect = 0.022
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F + S LT H +H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 32.1 bits (74), Expect = 0.022
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F S LT H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 32.1 bits (74), Expect = 0.022
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F S LT H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 27.5 bits (62), Expect = 1.0
Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K F SNLT
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLT 29
Score = 25.6 bits (57), Expect = 5.4
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K F + LT H +H G
Sbjct: 14 KCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C C K F+ K+NLT+H +H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C C K F+ K+ LT H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C C K F++K+ LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 33.2 bits (77), Expect = 0.007
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C C K F+ K +LT+H+++H
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 32.1 bits (74), Expect = 0.024
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C C K F+ K+ LT+H ++H G K
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.027
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C C K F+ K+ LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.029
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C C K F+ K+ LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.029
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C C K F+ K+ LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 27.1 bits (61), Expect = 1.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+CG C K F+ K+NLT
Sbjct: 13 YRCGECGKAFAQKANLT 29
Score = 25.5 bits (57), Expect = 4.6
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
+C C K F+ K LT+H ++H G
Sbjct: 14 RCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 34.8 bits (81), Expect = 0.002
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C C K F K NL H +H G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 34.4 bits (80), Expect = 0.003
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + ++C C K F K L H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 32.9 bits (76), Expect = 0.012
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + ++C C K F KG+L H+++H
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 32.9 bits (76), Expect = 0.012
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C C K F K L H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.020
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C C K F +K L H ++H G K
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 31.4 bits (72), Expect = 0.035
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C C K F K L H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 31.4 bits (72), Expect = 0.039
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C C K F K L H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 31.4 bits (72), Expect = 0.039
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C C K F K L H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 26.3 bits (59), Expect = 2.5
Identities = 8/27 (29%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G ++C C K F K NL
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLV 29
Score = 25.6 bits (57), Expect = 4.2
Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C C K F +K L H ++H G +
Sbjct: 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
+G + Y+C C K FS LT H H K
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 34.4 bits (80), Expect = 0.003
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ +G + Y+C C K FS LT+H H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 34.1 bits (79), Expect = 0.004
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
+G K +C C K FS LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
+G K +C C K FS LT+H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 32.1 bits (74), Expect = 0.021
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
+G K +C C K FS LT+H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
+G K +C C K FS LT+H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
+G K +C C K FS LT+H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ +G K +C C K FS LT+H H K
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 27.1 bits (61), Expect = 1.5
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C C K FS LT
Sbjct: 13 YQCSECGKSFSGSYRLT 29
Score = 26.4 bits (59), Expect = 2.1
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
+C C K FS LT+H H
Sbjct: 14 QCSECGKSFSGSYRLTQHWITHTR 37
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 34.8 bits (80), Expect = 0.002
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQG 196
G +KC C + F+ ++YL H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 34.1 bits (78), Expect = 0.004
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQG 331
KC C + F++++YL +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 32.9 bits (75), Expect = 0.012
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQG 223
KC C + F+ ++YL +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 32.5 bits (74), Expect = 0.015
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQG 250
KC C + F+ ++YL +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 32.5 bits (74), Expect = 0.015
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQG 277
KC C + F+ ++YL +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 32.5 bits (74), Expect = 0.015
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQG 304
KC C + F+ ++YL +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 31.8 bits (72), Expect = 0.029
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G +KC C + F+ + +L +H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 30.2 bits (68), Expect = 0.089
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
KC C + F+ ++ L +H H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 27.9 bits (62), Expect = 0.66
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
KC C + F+ + L +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
GV YKC C K FS K L H ++H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 34.1 bits (79), Expect = 0.005
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
YKC C K FS K L H+++H
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMH 35
Score = 33.3 bits (77), Expect = 0.008
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G+ KC C K FS K L H +H +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 32.5 bits (75), Expect = 0.016
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G+ KC C K FS K L H ++H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 31.7 bits (73), Expect = 0.029
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G+ KC C K FS K L H ++H K
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 31.0 bits (71), Expect = 0.054
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G+ KC C K FS K L H ++H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 31.0 bits (71), Expect = 0.057
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G+ KC C K FS K L H ++H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 31.0 bits (71), Expect = 0.057
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G+ KC C K FS K L H ++H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 26.7 bits (60), Expect = 1.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC C K FS K L
Sbjct: 13 YKCSQCEKSFSGKLRLL 29
Score = 26.0 bits (58), Expect = 3.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
KC C K FS K L H ++H
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTR 37
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C C K FS L H +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C C K FSR L +H +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 33.7 bits (78), Expect = 0.005
Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K C C K FS L KH LH G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y C C K FS L +H +LH
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 32.9 bits (76), Expect = 0.013
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C C K FS L +H +LH G K
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C C K FS L +H +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C C K FS L +H +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 32.1 bits (74), Expect = 0.024
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C C K FS L +H +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 26.0 bits (58), Expect = 3.3
Identities = 8/27 (29%), Positives = 8/27 (29%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y C C K FS L
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLL 29
Score = 25.2 bits (56), Expect = 6.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
C C K FS L +H +LH G
Sbjct: 14 NCKECGKSFSRAPCLLKHERLHSG 37
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K CD C K F + L +H +H G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y CD C K F + L H ++H G K
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 33.3 bits (77), Expect = 0.010
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y CD C K F L H+++H
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 32.9 bits (76), Expect = 0.011
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K CD C K F + L H ++H G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.039
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K CD C K F + L H ++H G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.045
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K CD C K F + L H ++H G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.048
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K CD C K F + L H ++H G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.048
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K CD C K F + L H ++H G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 25.9 bits (58), Expect = 3.5
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C C K F + L
Sbjct: 13 YVCDYCGKAFGLSAELV 29
Score = 24.8 bits (55), Expect = 9.8
Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
CD C K F L H ++H G
Sbjct: 14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + ++C C K F+ KS L+ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 33.6 bits (78), Expect = 0.005
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K+ +C C K F+RKS L+ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K+ +C C K F+ KS L+ H +H G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.015
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K+ +C C K F+ KS L+ H K+H G K
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K+ +C C K F+ KS L+ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K+ +C C K F+ KS L+ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K+ +C C K F+ KS L+ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 31.7 bits (73), Expect = 0.035
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
++C C K F+ K L+ H+K+H
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIH 35
Score = 25.9 bits (58), Expect = 3.1
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C C K F+ K L+ H K+H G
Sbjct: 14 ECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 3.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 415 YKCGLCSKEFSCKSNLT 431
++C C K F+ KS L+
Sbjct: 13 FECTECGKAFTRKSTLS 29
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.003
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F +S L H H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 33.7 bits (78), Expect = 0.005
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F +S+L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.020
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F +S L H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 31.4 bits (72), Expect = 0.035
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F +S L H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 31.4 bits (72), Expect = 0.036
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC+ C K F ++S L H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 31.4 bits (72), Expect = 0.038
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F +S L H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 31.4 bits (72), Expect = 0.038
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F +S L H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 31.4 bits (72), Expect = 0.046
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC+ C K F + L H+ H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 26.7 bits (60), Expect = 1.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC C K F +S+L
Sbjct: 13 YKCNECGKAFRARSSLA 29
Score = 24.8 bits (55), Expect = 8.2
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC+ C K F ++ L H H G
Sbjct: 14 KCNECGKAFRARSSLAIHQATHSGEKPSGP 43
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.003
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G Y+C C K FS K L +H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 33.3 bits (77), Expect = 0.008
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G Y+C C K FS K L H++ H
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 33.3 bits (77), Expect = 0.009
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G +C C K FSRK L H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 33.3 bits (77), Expect = 0.009
Identities = 11/41 (26%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G +C C K FS K L H H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.050
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G +C C K FS K L H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 30.9 bits (71), Expect = 0.052
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G +C C K FS K L H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 30.9 bits (71), Expect = 0.056
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G +C C K FS K L H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 30.9 bits (71), Expect = 0.056
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G +C C K FS K L H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 25.9 bits (58), Expect = 3.7
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K FS K L
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLI 29
Score = 24.8 bits (55), Expect = 8.8
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C C K FS K L H + H G
Sbjct: 14 ECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.003
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G R +KC+ C K F ++L H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G + +KC+ C K F + ++L +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 33.2 bits (77), Expect = 0.008
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G + +KC+ C K F ++L +H +H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.009
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G R +KC+ C K F HL +H+++H
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 31.7 bits (73), Expect = 0.028
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
G + +KC+ C K F ++L +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.034
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G + +KC+ C K F ++L +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.036
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G + +KC+ C K F ++L +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.036
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G + +KC+ C K F ++L +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 25.5 bits (57), Expect = 4.6
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G +KC C K F ++L
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLI 29
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 34.4 bits (80), Expect = 0.003
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
+ ++C C + F+ KS+L H ++H G K
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 33.7 bits (78), Expect = 0.006
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
++C C + F+ K HL +H+++H
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIH 35
Score = 32.9 bits (76), Expect = 0.010
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
K ++C C + F+ KS+L +H ++H G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.031
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
K ++C C + F+ KS+L +H ++H G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.032
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG 358
K ++C C + F+ KS+L +H +H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 31.7 bits (73), Expect = 0.033
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
K ++C C + F+ KS+L +H ++H G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.033
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
K ++C C + F+ KS+L +H ++H G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.033
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
K ++C C + F+ KS+L +H ++H G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 25.6 bits (57), Expect = 4.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
+C C + F+ K L +H ++H G
Sbjct: 14 QCHECGRGFTLKSHLNQHQRIHTG 37
Score = 25.2 bits (56), Expect = 6.9
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 415 YKCGLCSKEFSCKSNLT 431
++C C + F+ KS+L
Sbjct: 13 HQCHECGRGFTLKSHLN 29
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 34.4 bits (80), Expect = 0.003
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C C K FS ++L H ++H G K
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 33.2 bits (77), Expect = 0.007
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C C K FS+ ++L +H ++H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 33.2 bits (77), Expect = 0.009
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + Y+C C K FS HL +H+++H
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 32.9 bits (76), Expect = 0.010
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C C K FS ++L +H +H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.030
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K +C C K FS ++L +H ++H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 31.7 bits (73), Expect = 0.035
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C C K FS ++L +H ++H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.038
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C C K FS ++L +H ++H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.038
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C C K FS ++L +H ++H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 25.5 bits (57), Expect = 4.9
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G Y+C C K FS ++L
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLI 29
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C C K F+ +SNL H +H G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.005
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C C K F+ +S L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.021
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C C K F+ +S L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.022
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y+C C K F+ + +L H+K+H
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIH 35
Score = 31.3 bits (72), Expect = 0.039
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C C K F+ +S L H K+H G K
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 31.3 bits (72), Expect = 0.045
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C C K F+ +S L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 30.9 bits (71), Expect = 0.049
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C C K F+ +S L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 30.9 bits (71), Expect = 0.049
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C C K F+ +S L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 27.5 bits (62), Expect = 1.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C C K F+ +SNL
Sbjct: 13 YRCAECGKAFTDRSNLF 29
Score = 25.5 bits (57), Expect = 5.6
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
+C C K F+ + L H K+H G
Sbjct: 14 RCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + +KC+ C K+F+ S L +H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 33.3 bits (77), Expect = 0.007
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F+ S L H +H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.010
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F++ S L H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 32.9 bits (76), Expect = 0.010
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + +KC+ C K F+ L H+++H
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 31.3 bits (72), Expect = 0.036
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC+ C K F+ S L H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.040
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F+ S L H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.043
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F+ S L H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.043
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F+ S L H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 25.2 bits (56), Expect = 7.4
Identities = 8/27 (29%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G +KC C K F+ S L
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLH 29
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.004
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K F R S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC C K F S+L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 33.2 bits (77), Expect = 0.010
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C K F S+L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 32.4 bits (75), Expect = 0.015
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC C K F HL H+ +H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 32.1 bits (74), Expect = 0.019
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC C K F S+L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C K F S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C K F S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 32.1 bits (74), Expect = 0.025
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C K F S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 25.1 bits (56), Expect = 7.6
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 406 HMKLHQGIT-YKCGLCSKEFSCKSNLT 431
G YKC C K F S+L
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLA 29
Score = 24.7 bits (55), Expect = 8.2
Identities = 9/30 (30%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKC 417
KC C K F L H +H G
Sbjct: 14 KCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 34.1 bits (79), Expect = 0.004
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC C FS S+L H N+H G +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.007
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
+KC C FS L H+ +H
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVH 35
Score = 33.3 bits (77), Expect = 0.008
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + +KC C FS S L H +H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 32.1 bits (74), Expect = 0.023
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C FS+ S L H +H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 31.0 bits (71), Expect = 0.055
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC C FS S L H +H G K
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 30.6 bits (70), Expect = 0.080
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC C FS S L H +H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 30.6 bits (70), Expect = 0.087
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC C FS S L H +H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 30.6 bits (70), Expect = 0.087
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC C FS S L H +H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 26.0 bits (58), Expect = 3.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
+KC C FS S+L
Sbjct: 13 WKCRECDMCFSQASSLR 29
Score = 25.6 bits (57), Expect = 4.3
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
KC C FS L H +H G
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVG 37
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.004
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + ++C C K F+TKS L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 33.6 bits (78), Expect = 0.007
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K +C C K F+ KSNL H H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.038
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
++C C K F+ K +L H++ H
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTH 35
Score = 31.3 bits (72), Expect = 0.040
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C C K F+ KS L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 30.5 bits (70), Expect = 0.075
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C C K F+TKS L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 30.5 bits (70), Expect = 0.083
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C C K F+TKS L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 30.5 bits (70), Expect = 0.083
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C C K F+TKS L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 30.1 bits (69), Expect = 0.099
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C C K F++KS L H + H G K
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 27.1 bits (61), Expect = 1.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 415 YKCGLCSKEFSCKSNLT 431
++C C K F+ KSNL
Sbjct: 13 FECSECQKAFNTKSNLI 29
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.004
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC +C K F S+L H +H G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 34.0 bits (79), Expect = 0.005
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 324 EHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC +C K F S+L +H ++H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 33.6 bits (78), Expect = 0.006
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + YKC +C K F HL +H +H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 33.6 bits (78), Expect = 0.006
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 297 EHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC +C K F S+L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 31.7 bits (73), Expect = 0.033
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 270 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC +C K F S+L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 31.7 bits (73), Expect = 0.033
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 190 HMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
G K KC +C K F S+L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 31.3 bits (72), Expect = 0.035
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 216 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC +C K F S+L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 31.3 bits (72), Expect = 0.035
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 243 EHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC +C K F S+L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 25.6 bits (57), Expect = 4.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
YKC +C K F S+L
Sbjct: 13 YKCQVCGKAFRVSSHLV 29
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.1 bits (79), Expect = 0.004
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y+C C K F GHL +H+++H
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVH 35
Score = 32.1 bits (74), Expect = 0.019
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y+C C K F +L H ++H G +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 31.0 bits (71), Expect = 0.050
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
+C C K F + +L +H ++H G +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 30.2 bits (69), Expect = 0.096
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
+C C K F +L +H +H G R
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 29.4 bits (67), Expect = 0.19
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C C K F +L +H ++H G +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 29.4 bits (67), Expect = 0.20
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK 306
+C C K F +L +H ++H G +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 29.4 bits (67), Expect = 0.22
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK 252
+C C K F +L +H ++H G +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 29.4 bits (67), Expect = 0.22
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK 279
+C C K F +L +H ++H G +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGER 39
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.004
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 32.9 bits (76), Expect = 0.012
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F++ S+L H +H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 32.5 bits (75), Expect = 0.017
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
YKC+ C K F+ HL HR +H
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIH 35
Score = 32.5 bits (75), Expect = 0.018
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F+ S+L +H +H G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.031
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F+ S+L H +H G K
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 31.3 bits (72), Expect = 0.047
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 30.9 bits (71), Expect = 0.050
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 30.9 bits (71), Expect = 0.050
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.005
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + YKC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 32.8 bits (76), Expect = 0.011
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F++ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 32.5 bits (75), Expect = 0.015
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
YKC+ C K F+ HL HR +H
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIH 35
Score = 32.5 bits (75), Expect = 0.017
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K KC+ C K F+ S+L +H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.033
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F+ S+L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 31.3 bits (72), Expect = 0.046
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 31.3 bits (72), Expect = 0.049
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 31.3 bits (72), Expect = 0.049
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.1 bits (79), Expect = 0.005
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G + ++C C FSW L +H + H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 32.9 bits (76), Expect = 0.010
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG 358
G K +C C FS +L KH+ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 32.9 bits (76), Expect = 0.012
Identities = 8/37 (21%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + ++C C FS L H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 31.0 bits (71), Expect = 0.062
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K +C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 30.2 bits (69), Expect = 0.088
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K +C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 30.2 bits (69), Expect = 0.091
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K +C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 30.2 bits (69), Expect = 0.091
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K +C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 29.5 bits (67), Expect = 0.18
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K +C C FS L +H++ H+
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 25.2 bits (56), Expect = 5.6
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
+C C FS L +H++ H+
Sbjct: 14 QCKECGMNFSWSCSLFKHLRSHER 37
Score = 25.2 bits (56), Expect = 7.2
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 415 YKCGLCSKEFSCKSNLT 431
++C C FS +L
Sbjct: 13 FQCKECGMNFSWSCSLF 29
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 33.7 bits (78), Expect = 0.005
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
KC C K F WK L H++ H
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTH 35
Score = 33.3 bits (77), Expect = 0.009
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
KC C K F KS L H + H K
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 31.8 bits (73), Expect = 0.029
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
KC C K F KS L H H +
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.4 bits (72), Expect = 0.038
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC C K F KS L H + H K
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 30.6 bits (70), Expect = 0.077
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK 306
KC C K F KS L H + H K
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 30.6 bits (70), Expect = 0.079
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK 252
KC C K F KS L H + H K
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 30.6 bits (70), Expect = 0.079
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK 279
KC C K F KS L H + H K
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 30.2 bits (69), Expect = 0.11
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC C K F KS L H + H K
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 25.6 bits (57), Expect = 4.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Query: 415 YKCGLCSKEFSCKSNLT 431
KC C K F KS L
Sbjct: 13 CKCTECGKAFCWKSQLI 29
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 33.7 bits (78), Expect = 0.006
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y+C C K F KG LT H ++H
Sbjct: 11 YECQECGKSFRQKGSLTLHERIH 33
Score = 32.5 bits (75), Expect = 0.013
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
Y+C C K F K LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 31.4 bits (72), Expect = 0.032
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
+C C K F +K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 31.0 bits (71), Expect = 0.056
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
+C C K F K +LT H +H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTG 35
Score = 30.2 bits (69), Expect = 0.089
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+C C K F K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 29.8 bits (68), Expect = 0.12
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK 306
+C C K F K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 29.8 bits (68), Expect = 0.13
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK 252
+C C K F K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 29.8 bits (68), Expect = 0.13
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK 279
+C C K F K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 26.0 bits (58), Expect = 3.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
+C C K F K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTG 35
Score = 25.6 bits (57), Expect = 3.7
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C C K F K +LT
Sbjct: 11 YECQECGKSFRQKGSLT 27
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 33.7 bits (78), Expect = 0.006
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
G K C C K F S L KH +H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.008
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y C C K F W L +H+++H
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVH 35
Score = 32.9 bits (76), Expect = 0.013
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + Y C C K F S L H ++H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 31.8 bits (73), Expect = 0.033
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K C C K F S L +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 31.0 bits (71), Expect = 0.061
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C C K F S L +H ++H G K
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 30.6 bits (70), Expect = 0.082
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K C C K F S L +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 30.2 bits (69), Expect = 0.091
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K C C K F S L +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 30.2 bits (69), Expect = 0.091
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K C C K F S L +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 25.2 bits (56), Expect = 6.4
Identities = 7/17 (41%), Positives = 7/17 (41%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C C K F S L
Sbjct: 13 YNCKECGKSFRWASCLL 29
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 33.8 bits (78), Expect = 0.007
Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 4/44 (9%)
Query: 325 HMKLHQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGIR-YKCD 364
G K C C FS L++H H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 33.0 bits (76), Expect = 0.011
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 298 HMKLHQGLK-NKCD--LCSKEFSRKSYLTEHMKLHQGIK 333
G K C C FSR L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 32.3 bits (74), Expect = 0.023
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 163 HMKLHQGVR-YKCD--LCSKKFSTKSYLTAHMKLHQGLK 198
G + + C C +FS L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 31.1 bits (71), Expect = 0.046
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 189 AHMKLHQGLK-NKCD--LCSKEFSSKSYLTEHMKLHQGIK 225
+ G K C C FS L+ H + H G+K
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 29.6 bits (67), Expect = 0.17
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 217 HMKLHQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIK 252
G K C C FS L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 29.6 bits (67), Expect = 0.17
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 244 HMKLHQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIK 279
G K C C FS L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 28.8 bits (65), Expect = 0.33
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 271 HMKLHQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGLK 306
G K C C FS L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 27.3 bits (61), Expect = 1.1
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 352 HMNLHQGIR-YKCD--LCSKEFSWKGHLTEHRKLH 383
+ G + + C C FS L+ HR+ H
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 33.6 bits (78), Expect = 0.007
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G Y+C C K FS K L +H K H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 33.2 bits (77), Expect = 0.007
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
+ G Y+C C K FS K L H+K H
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 32.1 bits (74), Expect = 0.020
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
+C C K FSRK L H K H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 30.2 bits (69), Expect = 0.12
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK 306
+C C K FS K L H K H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 29.8 bits (68), Expect = 0.12
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK 252
+C C K FS K L H K H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 29.8 bits (68), Expect = 0.12
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK 279
+C C K FS K L H K H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 29.8 bits (68), Expect = 0.13
Identities = 12/38 (31%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G +C C K FS K L H K H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 29.4 bits (67), Expect = 0.18
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
+C C K FS K L H H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSG 37
Score = 25.5 bits (57), Expect = 4.4
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKCG 418
+C C K FS K L H K H G + G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 33.3 bits (77), Expect = 0.007
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G + +KC+ C K F T S +H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 32.9 bits (76), Expect = 0.013
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
+KC+ C K F H++ H
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSH 35
Score = 32.5 bits (75), Expect = 0.014
Identities = 11/42 (26%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCD 364
G K KC+ C K F S H H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.023
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
G K KC+ C K F S H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 31.4 bits (72), Expect = 0.044
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+ G K KC+ C K F + S H + H G K
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 31.0 bits (71), Expect = 0.054
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK 306
G K KC+ C K F T S H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 31.0 bits (71), Expect = 0.058
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
G K KC+ C K F T S H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 31.0 bits (71), Expect = 0.058
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
G K KC+ C K F T S H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 26.4 bits (59), Expect = 2.8
Identities = 6/17 (35%), Positives = 7/17 (41%)
Query: 415 YKCGLCSKEFSCKSNLT 431
+KC C K F S
Sbjct: 13 FKCEECGKGFYTNSQCY 29
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 33.0 bits (76), Expect = 0.010
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
Y C C K F+ + L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 32.3 bits (74), Expect = 0.016
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y C C K F+ +G L H++
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSC 34
Score = 31.5 bits (72), Expect = 0.032
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
C C K F+ + +L H
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 30.3 bits (69), Expect = 0.092
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
C C K F+++ L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 29.6 bits (67), Expect = 0.15
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK 225
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 29.6 bits (67), Expect = 0.19
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK 306
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 29.2 bits (66), Expect = 0.20
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK 252
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 29.2 bits (66), Expect = 0.20
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK 279
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 26.1 bits (58), Expect = 2.9
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 24.9 bits (55), Expect = 8.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y CG C K F+ + +L
Sbjct: 12 YLCGQCGKSFTQRGSLA 28
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 32.6 bits (74), Expect = 0.014
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCS 367
C++C K F +L +H H G + Y S
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 31.1 bits (70), Expect = 0.065
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK 387
+ C++C K F HL H+ H K
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 30.3 bits (68), Expect = 0.098
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 171 RYKCDLCSKKFSTKSYLTAHMKLHQGLK 198
+ C++C K F +L H H G K
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 29.9 bits (67), Expect = 0.14
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
C++C K F +L H H G K
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 29.5 bits (66), Expect = 0.18
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK 225
C++C K F +L H H G K
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 29.5 bits (66), Expect = 0.23
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK 306
C++C K F +L H H G K
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 29.5 bits (66), Expect = 0.23
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK 252
C++C K F +L H H G K
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 29.5 bits (66), Expect = 0.23
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK 279
C++C K F +L H H G K
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 29.1 bits (65), Expect = 0.28
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGI-TYKCGLCS 421
C++C K F L H H G Y G S
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 32.7 bits (75), Expect = 0.015
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y C C + FS L +H+K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMH 33
Score = 31.9 bits (73), Expect = 0.021
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQG 196
Y C C + FS + L H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 31.5 bits (72), Expect = 0.036
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQG 331
C C + FS + L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 31.1 bits (71), Expect = 0.047
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
C C + FS + L +H +H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 30.0 bits (68), Expect = 0.13
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQG 223
C C + FS + L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 29.6 bits (67), Expect = 0.16
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQG 250
C C + FS + L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 29.6 bits (67), Expect = 0.16
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQG 277
C C + FS + L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 29.6 bits (67), Expect = 0.16
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQG 304
C C + FS + L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 26.1 bits (58), Expect = 2.7
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG 412
C C + FS L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 25.7 bits (57), Expect = 4.4
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y C C + FS + L
Sbjct: 11 YSCAECKETFSDNNRLV 27
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 32.1 bits (74), Expect = 0.017
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
Y+C C K F+ K L +H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGES 37
Score = 32.1 bits (74), Expect = 0.023
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
Y+C C K F+ K L H++ H
Sbjct: 11 YECSECGKAFNRKDQLISHQRTH 33
Score = 31.7 bits (73), Expect = 0.030
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
+C C K F+RK L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
Score = 30.6 bits (70), Expect = 0.062
Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
+C C K F+ K L H H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 29.8 bits (68), Expect = 0.15
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK 306
+C C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
Score = 29.4 bits (67), Expect = 0.16
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK 252
+C C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
Score = 29.4 bits (67), Expect = 0.16
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK 279
+C C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
Score = 29.4 bits (67), Expect = 0.20
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK 225
+C C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
Score = 27.1 bits (61), Expect = 1.1
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQG-ITYKCG 418
+C C K F+ K L H + H G G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGESGPSSG 42
Score = 24.8 bits (55), Expect = 7.2
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C C K F+ K L
Sbjct: 11 YECSECGKAFNRKDQLI 27
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 34.8 bits (79), Expect = 0.058
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 123 DNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFS 182
+ND D +TR + + + K + Y C++C+ +FS
Sbjct: 73 NND-GDIITRPTSDSIAAVANATKPAAVVSD----PQSMKVTPIVNPSSYVCNVCNARFS 127
Query: 183 TKSYLTAHMKLHQGLKNKCDLCSKEFSS 210
T S L+ H++ L + ++
Sbjct: 128 TMSALSEHLRSDHRDDASTLLATPMINN 155
Score = 34.4 bits (78), Expect = 0.088
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 191 MKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFST 237
+ C++C+ FS+ S L+EH++ L + +
Sbjct: 109 TPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINN 155
Score = 32.9 bits (74), Expect = 0.26
Identities = 8/39 (20%), Positives = 17/39 (43%)
Query: 387 KNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFS 425
C++C+ FS+ L+EH++ L + +
Sbjct: 116 SYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMIN 154
Score = 32.9 bits (74), Expect = 0.28
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 218 MKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFST 264
+ C++C+ FST S L+EH++ L + +
Sbjct: 109 TPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINN 155
Score = 32.9 bits (74), Expect = 0.28
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 245 MKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFST 291
+ C++C+ FST S L+EH++ L + +
Sbjct: 109 TPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINN 155
Score = 32.1 bits (72), Expect = 0.39
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 272 MKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSR 318
+ C++C+ FST S L+EH++ L + +
Sbjct: 109 TPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINN 155
Score = 30.6 bits (68), Expect = 1.4
Identities = 9/46 (19%), Positives = 18/46 (39%)
Query: 299 MKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFS 344
+ C++C+ FS S L+EH++ L + +
Sbjct: 109 TPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMIN 154
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 31.0 bits (71), Expect = 0.062
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHM-NLHQGIR-YKC 363
G K +C C K F ++L +H H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 29.8 bits (68), Expect = 0.16
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKL-HQGLK 198
G + Y+C C K F + L H + H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 29.5 bits (67), Expect = 0.18
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEH-RKLH 383
+ G + Y+C C K F L H R H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 28.3 bits (64), Expect = 0.50
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKL-HQGIK 333
G K +C C K F + + L H + H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 27.5 bits (62), Expect = 0.89
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 189 AHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL-HQGIK 225
+ G K +C C K F + L H + H G K
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 26.8 bits (60), Expect = 1.7
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 271 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKL-HQGLK 306
G K +C C K F + L H + H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 26.8 bits (60), Expect = 1.9
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKL-HQGIK 252
G K +C C K F + L H + H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 26.8 bits (60), Expect = 1.9
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 244 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKL-HQGIK 279
G K +C C K F + L H + H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 25.6 bits (57), Expect = 4.5
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 415 YKCGLCSKEFSCKSNLT 431
Y+C C K F ++L
Sbjct: 13 YECIECGKAFIQNTSLI 29
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 29.8 bits (66), Expect = 0.15
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 171 RYKCDLCSKKFSTKSYLTAHMKLH 194
+KC+ C K FS YLT H ++H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 29.4 bits (65), Expect = 0.22
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLH 329
KC+ C K FS YLT+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 29.0 bits (64), Expect = 0.31
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLH 248
KC+ C K FS YLT+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 29.0 bits (64), Expect = 0.31
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLH 275
KC+ C K FS YLT+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 29.0 bits (64), Expect = 0.31
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLH 302
KC+ C K FS YLT+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 29.0 bits (64), Expect = 0.32
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLH 221
KC+ C K FS YLT+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 27.1 bits (59), Expect = 1.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 360 RYKCDLCSKEFSWKGHLTEHRKLH 383
+KC+ C K FS +LT+H ++H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 26.7 bits (58), Expect = 2.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 389 KCDLCSKEFSSKRILTEHMKLH 410
KC+ C K FS + LT+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 28.7 bits (64), Expect = 0.28
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 360 RYKCDLCSKEFSWKGHLTEHRKLHQDIKNK 389
++ C C K F HL++H LH+ + +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 28.7 bits (64), Expect = 0.32
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 171 RYKCDLCSKKFSTKSYLTAHMKLHQGLKNK 200
++ C C K+F +L+ H+ LH+ L +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 28.0 bits (62), Expect = 0.52
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 309 CDLCSKEFSRKSYLTEHMKLHQGIKNK 335
C C K F R +L++H+ LH+ + +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 25.3 bits (55), Expect = 4.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 282 CDLCSKEFSTKSYLTEHMKLHQGLKNK 308
C C K F +L++H+ LH+ L +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 25.3 bits (55), Expect = 5.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 201 CDLCSKEFSSKSYLTEHMKLHQGIKNK 227
C C K F +L++H+ LH+ + +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 24.9 bits (54), Expect = 5.8
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 228 CDLCSKEFSTKSYLTEHMKLHQGIKNK 254
C C K F +L++H+ LH+ + +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 24.9 bits (54), Expect = 5.8
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 255 CDLCSKEFSTKSYLTEHMKLHQGIKNK 281
C C K F +L++H+ LH+ + +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 24.5 bits (53), Expect = 8.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR 360
C C K F +L+KH+ LH+ +
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLG 29
>3oqq_A Putative lipoprotein; extracellular protein, structural genomics,
joint center for structural genomics, JCSG, protein
structure initiative; HET: PGE; 2.08A {Bacteroides
ovatus}
Length = 435
Score = 31.6 bits (70), Expect = 0.46
Identities = 30/225 (13%), Positives = 65/225 (28%), Gaps = 11/225 (4%)
Query: 16 AIPKKTGDPISIKVDNETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGT-HRTAVMEL 74
+ +++ E V + + F L + G S + +
Sbjct: 42 LVKDSRTLTLNVPAACEKVYMKYNTVSGTEATKEFALSPVSRGVDQSTGFNFETNRLASV 101
Query: 75 NVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDC 134
+ ED V P + + V++ E+ + + D D ND V
Sbjct: 102 TLALPEDAV---QPTNETDQGYLFYH---NTGVVMFEDGWPIQLDSWYDEDFNDVVFEYD 155
Query: 135 LEFFKSCPKVKVKSDHERRSINYKCQEKHM--KLHQGVRYKCDLCSKKFSTKSYLTAHMK 192
L+ + + +++ + + + + + D +TA +
Sbjct: 156 LKVTECHSQQMMETVGGKEELLLTLDVRAVGGIYPTVLGVVLDGLKS--EYVDRITASLI 213
Query: 193 LHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFST 237
L G DL +E S+K+ + K + T
Sbjct: 214 LKGGQGTMTDLAKEELSTKNIVKVENKNWNWSNDTRKEPRFAILT 258
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 29.8 bits (66), Expect = 0.46
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 163 HMKLHQGVRYKCDLCSK-KFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMK 219
++++ C C T L HM+ + C C K+ S + + H+
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 26.8 bits (58), Expect = 5.8
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 162 KHMKLHQGVRYKCDLCSKKFSTKSYLTAHMK 192
KHM+ + + C C K+ + + + H+
Sbjct: 53 KHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 26.0 bits (56), Expect = 10.0
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 227 KCDLCSK-EFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMK 273
C C T L +HM+ + C C K+ + + + H+
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 26.0 bits (56), Expect = 10.0
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 254 KCDLCSK-EFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMK 300
C C T L +HM+ + C C K+ + + + H+
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 27.9 bits (62), Expect = 0.55
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK 387
++ C C K F HLT H LH++ K
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.6 bits (61), Expect = 0.73
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 171 RYKCDLCSKKFSTKSYLTAHMKLHQGLK 198
++ C C K+F +LT H+ LH+ K
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 26.8 bits (59), Expect = 1.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 309 CDLCSKEFSRKSYLTEHMKLHQGIK 333
C C K F R +LT H+ LH+ K
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENKK 29
Score = 24.5 bits (53), Expect = 9.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 282 CDLCSKEFSTKSYLTEHMKLHQGLK 306
C C K F +LT H+ LH+ K
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENKK 29
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 27.4 bits (61), Expect = 0.82
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQ 195
Y C C ++F + L HM +H+
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVHR 30
Score = 25.1 bits (55), Expect = 5.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQ 357
C C +EF L HMN+H+
Sbjct: 8 TCSFCKREFRSAQALGGHMNVHR 30
Score = 25.1 bits (55), Expect = 6.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQ 411
C C +EF S + L HM +H+
Sbjct: 8 TCSFCKREFRSAQALGGHMNVHR 30
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 30.2 bits (67), Expect = 0.99
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 174 CDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLH 221
+ K+ + S T H L +G K + + + + L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 28.6 bits (63), Expect = 3.1
Identities = 10/49 (20%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 201 CDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLH 248
+ K S S T H L +G K + + + L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 28.6 bits (63), Expect = 3.2
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Query: 309 CDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLH 356
+ K S T H L +G K + + + + +L ++L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 28.2 bits (62), Expect = 4.9
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 228 CDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLH 275
+ K + S T H L +G K + + + L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 28.2 bits (62), Expect = 4.9
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 255 CDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLH 302
+ K + S T H L +G K + + + L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 27.5 bits (60), Expect = 7.1
Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 153 RSINYKCQEK-HMKLHQG-VRYKCDLCSKKFSTKSYLTAHMKLH 194
+ ++ QE H L +G R + + + L + L
Sbjct: 188 KRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 27.5 bits (60), Expect = 8.2
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 282 CDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLH 329
+ K + S T H L +G K + + + L + L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 27.1 bits (59), Expect = 9.9
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 1/49 (2%)
Query: 336 CDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLH 383
+ K S T H NL +G R + + + L L
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 26.8 bits (60), Expect = 1.2
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 312 CSKEFSRKSYLTEHMKLHQGIK 333
C K F+R L H + H G K
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
Score = 25.3 bits (56), Expect = 5.0
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 172 YKCD--LCSKKFSTKSYLTAHMKLHQGLK 198
+ C C K+F+ L H + H G K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 27.2 bits (59), Expect = 1.3
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLKNKCD 202
Y C +C +F K ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 27.2 bits (59), Expect = 1.4
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKNKCD 337
C +C F RK ++ H++ H G K
Sbjct: 12 SCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 25.6 bits (55), Expect = 5.0
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQ 384
Y C +C F K ++ H + H
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHD 34
Score = 25.3 bits (54), Expect = 6.7
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 389 KCDLCSKEFSSKRILTEHMKLHQGITYKCG 418
C +C F K ++ H++ H G K G
Sbjct: 12 SCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 24.9 bits (53), Expect = 9.1
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKNKCD 229
C +C F K ++ H++ H G K
Sbjct: 12 SCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 24.9 bits (53), Expect = 9.7
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKNKCD 256
C +C F K ++ H++ H G K
Sbjct: 12 SCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 24.9 bits (53), Expect = 9.7
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIKNKCD 283
C +C F K ++ H++ H G K
Sbjct: 12 SCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 26.5 bits (59), Expect = 1.5
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
C++C++ F+R+ +L H + H K
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 25.7 bits (57), Expect = 3.2
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
+ C++C++ F+ + HL H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSH 25
Score = 25.0 bits (55), Expect = 5.6
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
+ C++C++ F+ + +L H + H K
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 26.7 bits (58), Expect = 1.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQ 195
YKC LC + F KS L+ H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 25.9 bits (56), Expect = 2.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQD 385
YKC LC + F K L+ H+++H++
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHKN 26
Score = 25.1 bits (54), Expect = 5.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQ 330
KC LC + F KS L+ H ++H+
Sbjct: 3 KCGLCERSFVEKSALSRHQRVHK 25
Score = 25.1 bits (54), Expect = 5.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 200 KCDLCSKEFSSKSYLTEHMKLHQ 222
KC LC + F KS L+ H ++H+
Sbjct: 3 KCGLCERSFVEKSALSRHQRVHK 25
Score = 24.7 bits (53), Expect = 5.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQ 357
KC LC + F KS L++H +H+
Sbjct: 3 KCGLCERSFVEKSALSRHQRVHK 25
Score = 24.7 bits (53), Expect = 7.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 227 KCDLCSKEFSTKSYLTEHMKLHQ 249
KC LC + F KS L+ H ++H+
Sbjct: 3 KCGLCERSFVEKSALSRHQRVHK 25
Score = 24.7 bits (53), Expect = 7.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQ 276
KC LC + F KS L+ H ++H+
Sbjct: 3 KCGLCERSFVEKSALSRHQRVHK 25
Score = 24.7 bits (53), Expect = 7.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 281 KCDLCSKEFSTKSYLTEHMKLHQ 303
KC LC + F KS L+ H ++H+
Sbjct: 3 KCGLCERSFVEKSALSRHQRVHK 25
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 28.2 bits (62), Expect = 2.0
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Query: 344 SHKSNLTKHMNLHQGIRYKCDLCSKEF----SWKGHL-TEHRKLHQDIKNKCDLCSKEFS 398
+H + N Y+C C+ + + H+ +EH + + C C+
Sbjct: 2 AHHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTK 61
Query: 399 SKRILTEH-MKLHQG 412
L+EH +K H G
Sbjct: 62 RYDALSEHNLKYHPG 76
Score = 26.7 bits (58), Expect = 6.3
Identities = 11/54 (20%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Query: 335 KCDLCSKEFSHKSNLTKHM-----NLHQGIRYKCDLCSKEFSWKGHLTEHRKLH 383
+C C+ + + T H+ N+ Y C C+ L+EH +
Sbjct: 20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY 73
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 28.0 bits (61), Expect = 2.4
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 163 HMKLHQGVRYKCDLCSK-KFSTKSYLTAHMKLHQGLKN--KCDLCSKEFSSKSYLTEHMK 219
+H+ C C+ T L HM++ Q L++ KC C K+F SK+ L H
Sbjct: 16 QRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 26.4 bits (57), Expect = 2.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 307 NKCDLCSKEFSRKSYLTEHMKLHQG 331
++C C K F S L EH LH G
Sbjct: 13 SECQECGKIFRHSSLLIEHQALHAG 37
Score = 25.6 bits (55), Expect = 4.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 334 NKCDLCSKEFSHKSNLTKHMNLHQG 358
++C C K F H S L +H LH G
Sbjct: 13 SECQECGKIFRHSSLLIEHQALHAG 37
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 25.9 bits (56), Expect = 2.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
Y C C ++F+ L H+++H G K
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 24.7 bits (53), Expect = 8.3
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
C C ++F+ L +H+ +H G
Sbjct: 5 VCIHCQRQFADPGALQRHVRIHTG 28
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 25.9 bits (56), Expect = 2.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQG 196
Y C +C K+FS K + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 26.4 bits (57), Expect = 2.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 356 HQGIRYKCDLCSKEFSWKGHLTEHRKLH 383
H RY+C C F+ + HL +H+K H
Sbjct: 8 HTRKRYECSKCQATFNLRKHLIQHQKTH 35
Score = 24.9 bits (53), Expect = 8.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 167 HQGVRYKCDLCSKKFSTKSYLTAHMKLHQG 196
H RY+C C F+ + +L H K H
Sbjct: 8 HTRKRYECSKCQATFNLRKHLIQHQKTHAA 37
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 25.6 bits (55), Expect = 4.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
KC CS + K+NL H+ H G
Sbjct: 11 KCPQCSYASAIKANLNVHLRKHTG 34
Score = 25.6 bits (55), Expect = 4.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 168 QGVRYKCDLCSKKFSTKSYLTAHMKLHQGLK 198
G YKC CS + K+ L H++ H G K
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 25.6 bits (55), Expect = 4.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 360 RYKCDLCSKEFSWKGHLTEHRKLHQD 385
+ CD+C K+F KG L H+ LH
Sbjct: 9 THLCDMCGKKFKSKGTLKSHKLLHTA 34
Score = 24.4 bits (52), Expect = 9.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 171 RYKCDLCSKKFSTKSYLTAHMKLH 194
+ CD+C KKF +K L +H LH
Sbjct: 9 THLCDMCGKKFKSKGTLKSHKLLH 32
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 25.4 bits (56), Expect = 4.5
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 171 RYKCDL--CSKKFSTKSYLTAHMKLHQGLK 198
++ C + C K + S+L AH++ H G +
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 27.6 bits (60), Expect = 4.8
Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 9/87 (10%)
Query: 334 NKCDLCSKEFSHKSNLTKHM-------NLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDI 386
+C +CS +S H + + + S +D
Sbjct: 33 TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDR 92
Query: 387 KNKCDLCSKEFSSKRILTEHM--KLHQ 411
C +C+ FSS + H K H
Sbjct: 93 SKCCPVCNMTFSSPVVAESHYIGKTHI 119
Score = 27.2 bits (59), Expect = 5.9
Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 9/85 (10%)
Query: 174 CDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNK------ 227
C +CS ++S AH + + + S + K +
Sbjct: 35 CKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSK 94
Query: 228 -CDLCSKEFSTKSYLTEHM--KLHQ 249
C +C+ FS+ H K H
Sbjct: 95 CCPVCNMTFSSPVVAESHYIGKTHI 119
Score = 27.2 bits (59), Expect = 6.4
Identities = 15/87 (17%), Positives = 26/87 (29%), Gaps = 9/87 (10%)
Query: 199 NKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNK---- 254
+C +CS S+S H + + + S + K +
Sbjct: 33 TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDR 92
Query: 255 ---CDLCSKEFSTKSYLTEHM--KLHQ 276
C +C+ FS+ H K H
Sbjct: 93 SKCCPVCNMTFSSPVVAESHYIGKTHI 119
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 24.8 bits (54), Expect = 5.8
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 308 KCDLCSKEFSRKSYLTEHM-KLHQG 331
C LC++ F+R+ L H K+H G
Sbjct: 4 ACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 24.4 bits (53), Expect = 9.0
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 172 YKCDLCSKKFSTKSYLTAHM-KLHQG 196
Y C LC++ F+ + L H K+H G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex,
phosphoesterase fold, OB fold, zinc-binding motif, DNA
replication; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Length = 206
Score = 27.7 bits (61), Expect = 6.9
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 360 RYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRI---LTEHMKLHQGITYK 416
C C K F + G ++ + +C C + F+ ++ + ++ H + Y
Sbjct: 22 ELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLFTPLQLTSQIEHSIRAHISLYYA 81
Query: 417 CGLCSKEFSCKSN 429
L + +C
Sbjct: 82 GWLQCDDSTCGIV 94
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 24.8 bits (53), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
+ C+ C+K F K L AH+++H K
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 24.8 bits (53), Expect = 8.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 280 NKCDLCSKEFSTKSYLTEHMKLHQGLKNK 308
++C C + F L EH LH G KN
Sbjct: 13 HQCRECGEIFFQYVSLIEHQVLHMGQKNS 41
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 24.3 bits (52), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 174 CDLCSKKFSTKSYLTAHMKLHQGLK 198
C +C K F+ S L AH++ H G K
Sbjct: 5 CVMCGKAFTQASSLIAHVRQHTGEK 29
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.131 0.400
Gapped
Lambda K H
0.267 0.0465 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,093,780
Number of extensions: 348567
Number of successful extensions: 3552
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2713
Number of HSP's successfully gapped: 1443
Length of query: 431
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 335
Effective length of database: 4,021,377
Effective search space: 1347161295
Effective search space used: 1347161295
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.2 bits)