RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8478
(88 letters)
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 71.7 bits (175), Expect = 2e-17
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPA 61
+W APEC+ FSS+SDVW+FGVL+WE S GQ+PY +V + G R+ PA
Sbjct: 174 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA 233
Query: 62 NCSHLIRS 69
C +
Sbjct: 234 GCPREMYD 241
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 262
Score = 70.8 bits (173), Expect = 5e-17
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPA 61
+W APE L + FS++SDVW+FG+LLWEI S G+ PYP DV+ V G +++ P
Sbjct: 164 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 223
Query: 62 NCSHLIRS 69
C +
Sbjct: 224 GCPPAVYE 231
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 258
Score = 68.6 bits (167), Expect = 3e-16
Identities = 32/67 (47%), Positives = 42/67 (62%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
RW PE L+ FSS+SD+WAFGVL+WEI SLG+ PY TN + ++ G RL RP
Sbjct: 166 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHL 225
Query: 63 CSHLIRS 69
S + +
Sbjct: 226 ASEKVYT 232
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET
{Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 68.3 bits (166), Expect = 5e-16
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPA 61
+WMA E L F+++SDVW+FGVLLWE+M+ G PYP D+ Y+ G RL +P
Sbjct: 198 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 257
Query: 62 NCS 64
C
Sbjct: 258 YCP 260
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 317
Score = 68.3 bits (166), Expect = 6e-16
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+WMA E ++ +++ QSDVW++GV +WE+M+ G +PY ++ + G RL +P
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 237
Query: 63 CSHLIRS 69
C+ +
Sbjct: 238 CTIDVYM 244
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 263
Score = 66.2 bits (161), Expect = 2e-15
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+W +PE +SS+SDVW+FGVL+WE+ S G+ PY R+N +V+ + G RL +P
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRL 226
Query: 63 CSHLIRS 69
S +
Sbjct: 227 ASTHVYQ 233
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 66.3 bits (161), Expect = 2e-15
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+W APEC+ FSS+SDVW++GV +WE +S GQ+PY +V+ ++ G R+ P
Sbjct: 177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE 236
Query: 63 CSHLIRS 69
C + +
Sbjct: 237 CPPELYA 243
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 272
Score = 65.4 bits (159), Expect = 4e-15
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPA 61
+W APE + G F+ +SDVW+FG+LL EI++ G+ PYP TN +V+ + G R+ RP
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
Query: 62 NCSHLIRS 69
NC +
Sbjct: 234 NCPEELYQ 241
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 65.7 bits (159), Expect = 4e-15
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPA 61
+WMAPE L D +++ QSDVW+FGVLLWEI +LG PYP ++ ++ G R+++P+
Sbjct: 201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 260
Query: 62 NCSHLIRS 69
NC++ +
Sbjct: 261 NCTNELYM 268
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 65.5 bits (159), Expect = 5e-15
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPA 61
+W APE + G F+ +SDVW+FG+LL E+ + G+ PYP N +VL V G R+ P
Sbjct: 178 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 237
Query: 62 NCSHLIR 68
C +
Sbjct: 238 ECPESLH 244
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 299
Score = 65.2 bits (158), Expect = 7e-15
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
RW APE + F+S SDVW++G+++WE+MS G++PY TN DV++ + RL P +
Sbjct: 198 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMD 257
Query: 63 CSHLIRS 69
C +
Sbjct: 258 CPSALHQ 264
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 283
Score = 63.7 bits (154), Expect = 3e-14
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
RW APE + F+S SDVW+FG+++WE+M+ G++PY +N +V+ + G RL P +
Sbjct: 178 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMD 237
Query: 63 CSHLIR 68
C I
Sbjct: 238 CPSAIY 243
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 309
Score = 63.3 bits (153), Expect = 4e-14
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPA 61
RWMA E L ++++ SDVW++GVLLWEI+SLG PY T ++ + G RL +P
Sbjct: 190 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL 249
Query: 62 NCS 64
NC
Sbjct: 250 NCD 252
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 273
Score = 62.5 bits (151), Expect = 6e-14
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYV-RGGGRLNRPA 61
W APE L FS SD W FGV LWE+ + GQ+P+ +LH + + G RL RP
Sbjct: 179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
Query: 62 NCSHLIRS 69
+C I +
Sbjct: 239 DCPQDIYN 246
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 308
Score = 61.4 bits (148), Expect = 2e-13
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
RWM+PE L DG+F++ SDVW+FGV+LWEI +L +QPY +N VL +V GG L++P N
Sbjct: 200 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 259
Query: 63 CSHLIRS 69
C ++
Sbjct: 260 CPDMLFE 266
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 60.4 bits (146), Expect = 3e-13
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+M+PE + ++ +SD+W+ G LL+E + P+ A + ++ +R G P
Sbjct: 179 YYMSPEQMNRMSYNEKSDIWSLGCLLYE-LCALMPPFTAFSQKELAGKIREGKFRRIPYR 237
Query: 63 CSHLIRS 69
S +
Sbjct: 238 YSDELNE 244
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 325
Score = 60.6 bits (146), Expect = 4e-13
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLH-YVRGGGRLNRP 60
+WMAPE L +G+++ +SDVW++G+LLWEI SLG PYP + ++ G ++++P
Sbjct: 230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQP 289
Query: 61 ANCSHLIRS 69
+ I
Sbjct: 290 FYATEEIYI 298
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 301
Score = 60.2 bits (145), Expect = 4e-13
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPA 61
RWM PE + ++++SDVWA+GV+LWEI S G QPY + +V++YVR G L P
Sbjct: 206 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE 265
Query: 62 NCS 64
NC
Sbjct: 266 NCP 268
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 287
Score = 60.1 bits (145), Expect = 5e-13
Identities = 29/64 (45%), Positives = 34/64 (53%)
Query: 1 MTRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRP 60
+W APE L FS +SDVWAFGVLLWEI + G PYP V + R+ RP
Sbjct: 179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 238
Query: 61 ANCS 64
C
Sbjct: 239 EGCP 242
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 273
Score = 59.4 bits (143), Expect = 7e-13
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+WMAPE + F+S SDVW FGV +WEI+ G +P+ N DV+ + G RL P N
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233
Query: 63 CSHLIRS 69
C + S
Sbjct: 234 CPPTLYS 240
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 293
Score = 59.6 bits (144), Expect = 8e-13
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGG--RLNRP 60
WMAPE + + + D+W+ G++ E++ G+ PY + L+ + G L P
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 61 ANCSHLIRS 69
S + R
Sbjct: 240 EKLSAIFRD 248
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 276
Score = 59.2 bits (143), Expect = 9e-13
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 3 RWMAPECLV---DGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRL-- 57
WMAPE + +S QSDV+AFG++L+E+M+ GQ PY N D + ++ G G L
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSP 229
Query: 58 ---NRPANCSHLIRS 69
+NC ++
Sbjct: 230 DLSKVRSNCPKAMKR 244
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein
kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 322
Score = 55.4 bits (133), Expect = 3e-11
Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDV---LHYVRGGGRLNR 59
+M+PE L +S QSD+W+ G+ L E+ G+ P P ++ G
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAV-GRYPIPPPDAKELELMFGCQVEGDAAET 226
Query: 60 PANCSHLIRSRNRLTENKAPSAVSKKRIH 88
P R + + P + +
Sbjct: 227 PPRPRTPGRPLSSYGMDSRPPMAIFELLD 255
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 263
Score = 54.2 bits (130), Expect = 5e-11
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
++ PE + + + D+W+ GVL +E + G+ P+ A T + + P
Sbjct: 169 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFEANTYQETYKRIS-RVEFTFPDF 226
Query: 63 CSHLIRS 69
+ R
Sbjct: 227 VTEGARD 233
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo
sapiens) [TaxId: 9606]}
Length = 320
Score = 54.0 bits (129), Expect = 9e-11
Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 4 WMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPANC 63
++APE L+ ++ D W+FGVLL+E++ GQ P+ + ++ H +R P
Sbjct: 169 YIAPEILLGQKYNHSVDWWSFGVLLYEMLI-GQSPFHGQDEEELFHSIR-MDNPFYPRWL 226
Query: 64 S----HLIRSRNRLTENKAPSAVSKKRIH 88
L+ K R H
Sbjct: 227 EKEAKDLLVKLFVREPEKRLGVRGDIRQH 255
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein
kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 51.5 bits (123), Expect = 6e-10
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Query: 1 MTRWMAPECLV-----DGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGG 55
WMAPE ++ D + ++DVW+ G+ L E+ + P+ + VL +
Sbjct: 173 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE-IEPPHHELNPMRVLLKIAKSE 231
Query: 56 --RLNRPANCSHLIRS 69
L +P+ S +
Sbjct: 232 PPTLAQPSRWSSNFKD 247
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain
{Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Length = 350
Score = 51.2 bits (122), Expect = 7e-10
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGG 54
+ APE +D+W+ GVL + ++S G P+ + + L V+
Sbjct: 190 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSC 240
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 270
Score = 50.8 bits (121), Expect = 9e-10
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLH 49
+MAPE + + DV+AFG+ + E+ + + PY N ++
Sbjct: 178 EFMAPEMY-EEKYDESVDVYAFGMCMLEMAT-SEYPYSECQNAAQIY 222
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human
(Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 50.9 bits (121), Expect = 1e-09
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGG---RLNR 59
++APE + ++D+W+ GV+ + ++S G P+ T + L V
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANVSAVNYEFEDEY 239
Query: 60 PANCSHLIRS 69
+N S L +
Sbjct: 240 FSNTSALAKD 249
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein
kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 50.4 bits (120), Expect = 2e-09
Identities = 12/64 (18%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 1 MTRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRP 60
++++PE L + SD+WA G +++++++ G P+ A + + + P
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEYLIFQKII-KLEYDFP 230
Query: 61 ANCS 64
Sbjct: 231 EKFF 234
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 311
Score = 49.4 bits (117), Expect = 4e-09
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLH-YVRGGGRLNRP 60
+WMAPE + + +++ +SDVW++G+ LWE+ SLG PYP + ++ G R+ P
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 270
Query: 61 ANCS 64
+
Sbjct: 271 EHAP 274
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 305
Score = 48.7 bits (115), Expect = 6e-09
Identities = 14/82 (17%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+ APE L+ +++ D+W+ G + E+ + + ++VD L + L +
Sbjct: 180 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEED 238
Query: 63 CSHLIRSRNRLTENKAPSAVSK 84
+ + +K+ + K
Sbjct: 239 WPRDVALPRQAFHSKSAQPIEK 260
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 309
Score = 48.8 bits (116), Expect = 6e-09
Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 3 RWMAPECLV---DGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYV-RGGGRLN 58
WMAPE ++ +G + + DVW+ G+ E+ + P + L+++ +
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPAL 234
Query: 59 RPANCSHLIRS 69
+ + S R+
Sbjct: 235 QSGHWSEYFRN 245
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare
(Aplysia californica), twk43 [TaxId: 6500]}
Length = 352
Score = 48.5 bits (115), Expect = 6e-09
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 1 MTRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGG 54
+ APE + +D+WA GVL + ++S G P+ +++ L V+
Sbjct: 191 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLETLQNVKRC 243
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 321
Score = 47.7 bits (113), Expect = 1e-08
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 2 TRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGG 54
+ APE + S+ +D+W+ G L++ ++S G P+ A TN ++ +
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQIIENIMNA 218
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic
domain {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 277
Score = 47.0 bits (111), Expect = 2e-08
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
++++PE ++SDV++ G +L+E+++ G+ P+ + V V + + A
Sbjct: 179 QYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVREDPIPPSAR 237
Query: 63 CSHL 66
L
Sbjct: 238 HEGL 241
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 307
Score = 46.2 bits (109), Expect = 4e-08
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 4 WMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYV-RGGGRLNRP 60
++APE L +S D W+ GV+ + ++ G P+ + + + + + P
Sbjct: 175 YVAPEVLAQKPYSKAVDCWSIGVIAYILLC-GYPPFYDENDAKLFEQILKAEYEFDSP 231
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 46.2 bits (109), Expect = 4e-08
Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 3 RWMAPECLVDGLFSSQ-SDVWAFGVLLWEIMSLGQQPYPARTNVDVL--HYVRGGGRLNR 59
++APE L F ++ DVW+ G++L +++ G+ P+ ++ + LN
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDSCQEYSDWKEKKTYLNP 228
Query: 60 PANCSHLIRS 69
+
Sbjct: 229 WKKIDSAPLA 238
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 316
Score = 46.2 bits (109), Expect = 4e-08
Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 1 MTRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRP 60
++APE + ++ D W+FG+L++E+++ G P+ + + L P
Sbjct: 164 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFYDSNTMKTYEKIL-NAELRFP 221
Query: 61 ANCSHLIRS 69
+ ++
Sbjct: 222 PFFNEDVKD 230
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor
receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 46.0 bits (108), Expect = 5e-08
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVD-VLHYVRGGGRLNRPA 61
+WMAPE + D +++ QSDVW+FGVLLWEI SLG PYP + ++ G R+ P
Sbjct: 201 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 260
Query: 62 NCS 64
+
Sbjct: 261 YTT 263
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 293
Score = 45.2 bits (106), Expect = 1e-07
Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRP 60
R+M+ + S + D+ A G + + G P+ G +
Sbjct: 178 RYMSINTHLGREQSRRDDLEALGHVFMYFLR-GSLPWQGLKAATNKQKYERIGEKKQS 234
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 298
Score = 44.5 bits (104), Expect = 2e-07
Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 1 MTRWMAPECLV-DGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLH 49
+ APE L+ +S+ D+W+ G + E+++ + +P + +D L
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQLF 213
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2,
mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 335
Score = 44.3 bits (104), Expect = 2e-07
Identities = 11/58 (18%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRP 60
++APE L + D+W+ GV+++ + G P+ + + + ++ R+ +
Sbjct: 178 YYVAPEVLGPEKYDKSCDMWSLGVIMYI-LLCGYPPFYSNHGLAISPGMKTRIRMGQY 234
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase
kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId:
9986]}
Length = 277
Score = 43.5 bits (102), Expect = 4e-07
Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGG 54
+ + D+W+ GV+++ +++ G P+ R + +L + G
Sbjct: 180 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQMLMLRMIMSG 230
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 42.5 bits (99), Expect = 1e-06
Identities = 8/50 (16%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVR 52
R+ + + S + D+ + G +L +LG P+
Sbjct: 178 RYASINTHLGIEQSRRDDLESLGYVLMY-FNLGSLPWQGLKAATKRQKYE 226
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 292
Score = 41.5 bits (96), Expect = 2e-06
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Query: 1 MTRWMAPECLVDG--LFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLN 58
+T W P ++ G L+S+ D+W+ G + E+ + G+ +P D L +
Sbjct: 163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 222
Query: 59 RPANCSHLIRSRNRLTENKAPSAVSKKRI 87
+ + + P+ S +
Sbjct: 223 TEEQWPSMTKLPDYKPYPMYPATTSLVNV 251
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 350
Score = 40.9 bits (95), Expect = 4e-06
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 1 MTRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRP 60
+APE ++ ++ D WA GVL++E+ + G P+ A + + + G++ P
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIV-SGKVRFP 258
Query: 61 ANCS 64
++ S
Sbjct: 259 SHFS 262
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein
kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 273
Score = 40.8 bits (95), Expect = 4e-06
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 4 WMAPECLVDGLFSSQS-DVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+ PE + + +S VW+ G+LL++++ G P+ + R +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVC-GDIPFEHDEEIIRGQVFF---RQRVSSE 230
Query: 63 CSHLIRS 69
C HLIR
Sbjct: 231 CQHLIRW 237
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 337
Score = 40.9 bits (95), Expect = 4e-06
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
++APE L D + D W GV+++E+M G+ P+ + + + + + P
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELIL-MEEIRFPRT 227
Query: 63 CSHLIRS 69
S +S
Sbjct: 228 LSPEAKS 234
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 299
Score = 40.6 bits (94), Expect = 4e-06
Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 4 WMAPECLVD-GLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+ APE L ++ D+WA G +L E++ P +++D L +
Sbjct: 166 YRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQ 224
Query: 63 CSHLIRSRNRLTENKAP 79
+ + +T P
Sbjct: 225 WPDMCSLPDYVTFKSFP 241
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2
{Cow (Bos taurus) [TaxId: 9913]}
Length = 364
Score = 40.5 bits (94), Expect = 5e-06
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 4 WMAPECLVDGL-FSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRG--GGRLNRP 60
+MAPE L G+ + S +D ++ G +L++++ G P+ D R + P
Sbjct: 171 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTKDKHEIDRMTLTMAVELP 229
Query: 61 ANCSHLIRS 69
+ S +RS
Sbjct: 230 DSFSPELRS 238
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium
falciparum) [TaxId: 5833]}
Length = 286
Score = 40.3 bits (93), Expect = 5e-06
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 1 MTRWMAPECLV-DGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYV 51
+ AP+ L+ +S+ D+W+ G + E+++ G +P + D L +
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRI 213
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 350
Score = 39.4 bits (91), Expect = 1e-05
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 4 WMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYV 51
++S DVW+ G +L E++ GQ +P + VD L +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEI 235
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 345
Score = 39.0 bits (90), Expect = 1e-05
Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 1 MTRWMAPECLVDGLFSSQS-DVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNR 59
+ APE +++ ++S D+W+ G +L M + +P + +D L+++ G
Sbjct: 175 TRWYRAPEIMLNSKGYTKSIDIWSVGCILA-EMLSNRPIFPGKHYLDQLNHILGILGSPS 233
Query: 60 PANCSHLIRSRNRLTENKAP 79
+ + +I + R P
Sbjct: 234 QEDLNCIINLKARNYLLSLP 253
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 303
Score = 39.1 bits (90), Expect = 2e-05
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 3 RWMAPECLVDGL------FSSQSDVWAFGVLLWEIMS 33
R+MAPE L D + ++D++A G++ WEI
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 37.5 bits (86), Expect = 5e-05
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Query: 1 MTRWMAPECLVDGL--FSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGG---G 55
+MAP+ + G D W+ GVL++E+++ G P+ + +
Sbjct: 193 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFTVDGEKNSQAEISRRILKS 251
Query: 56 RLNRPANCSHLIRS 69
P S L +
Sbjct: 252 EPPYPQEMSALAKD 265
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 318
Score = 37.2 bits (85), Expect = 7e-05
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Query: 2 TRWMAPECLVDG--LFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYV 51
T W P L+ G + D+W G ++ E M T L +
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAE-MWTRSPIMQGNTEQHQLALI 234
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 355
Score = 35.7 bits (81), Expect = 2e-04
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Query: 3 RWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNRPAN 62
+ APE ++ + D+W+ G ++ E M + +P R +D + V P
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGE-MVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241
Query: 63 CSHLIRSRNRLTENK 77
L + EN+
Sbjct: 242 MKKLQPTVRNYVENR 256
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 348
Score = 35.6 bits (81), Expect = 3e-04
Identities = 12/52 (23%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 1 MTRWMAPECLVDGLFSSQS-DVWAFGVLLWEIMSLGQQPYPARTNVDVLHYV 51
+ APE +++ + +Q+ D+W+ G ++ E+++ G+ +P ++D L +
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLI 231
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 34.4 bits (78), Expect = 6e-04
Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Query: 1 MTRWMAPECLVDGL-FSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVRGGGRLNR 59
+ APE +++ + ++ D+W+ G ++ E+++ G+ + ++D L +
Sbjct: 181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT-GKTLFKGSDHLDQLKEIMKVTGTPP 239
Query: 60 PANCSHLIRSRNRLTENKAPSAVSK 84
L + P K
Sbjct: 240 AEFVQRLQSDEAKNYMKGLPELEKK 264
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 362
Score = 34.2 bits (77), Expect = 7e-04
Identities = 8/44 (18%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 1 MTRWMAPECLVDGLFSSQSDVWAFGVLLWEIMSLGQQPYPARTN 44
+ +PE L+ + +D+W+ L++E+++ G +
Sbjct: 192 TREYRSPEVLLGAPWGCGADIWSTACLIFELIT-GDFLFEPDEG 234
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit
{Rattus norvegicus [TaxId: 10116]}
Length = 328
Score = 31.4 bits (70), Expect = 0.010
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 4 WMAPECLVD-GLFSSQSDVWAFGVLLWEIMSLGQQPYPARTNVDVLHYVR 52
+ PE LVD ++ D+W+ G +L ++ + + N D L +
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
>d1b43a2 c.120.1.2 (A:1-219) Flap endonuclease-1 (Fen-1 nuclease)
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 219
Score = 26.3 bits (57), Expect = 0.49
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 4 WMAPECLVDGLFSSQSDVWAFG--VLLWEIMSLGQQPYPAR 42
+MA + V S D FG L+ + G++ P +
Sbjct: 158 YMAAKGSVYASASQDYDSLLFGAPRLVRNLTITGKRKLPGK 198
>d1rxwa2 c.120.1.2 (A:3-219) Flap endonuclease-1 (Fen-1 nuclease)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 217
Score = 25.9 bits (56), Expect = 0.75
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 4 WMAPECLVDGLFSSQSDVWAFGV--LLWEIMSLGQQPYP 40
+MA + V+ S D FG L + G++ P
Sbjct: 156 YMAAKGDVEYTGSQDYDSLLFGSPRLARNLAITGKRKLP 194
>d1a77a2 c.120.1.2 (A:2-208) Flap endonuclease-1 (Fen-1 nuclease)
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 207
Score = 25.1 bits (54), Expect = 1.4
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 4 WMAPECLVDGLFSSQSDVWAFGV 26
+MA + V + S D +G
Sbjct: 158 YMAKKGDVWAVVSQDYDALLYGA 180
>d1ul1x2 c.120.1.2 (X:2-217) Flap endonuclease-1 (Fen-1 nuclease)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 216
Score = 24.0 bits (51), Expect = 2.9
Identities = 6/39 (15%), Positives = 12/39 (30%), Gaps = 2/39 (5%)
Query: 4 WMAPECLVDGLFSSQSDVWAFGV--LLWEIMSLGQQPYP 40
+ V + D FG L+ + + + P
Sbjct: 164 ALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLP 202
>d1smyc_ e.29.1.1 (C:) RNA-polymerase beta {Thermus thermophilus
[TaxId: 274]}
Length = 1119
Score = 23.6 bits (50), Expect = 5.5
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 8 ECLVDGLFSSQSDV-WAFGVLLWEIMSLG 35
E ++ G + V +F VL+ E+ +L
Sbjct: 1068 EAIIKGEDVPEPSVPESFRVLVKELQALA 1096
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.134 0.434
Gapped
Lambda K H
0.267 0.0478 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 320,117
Number of extensions: 11292
Number of successful extensions: 95
Number of sequences better than 10.0: 1
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 68
Length of query: 88
Length of database: 2,407,596
Length adjustment: 53
Effective length of query: 35
Effective length of database: 1,679,906
Effective search space: 58796710
Effective search space used: 58796710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.5 bits)