BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8483
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q963B6|RL10A_SPOFR 60S ribosomal protein L10a OS=Spodoptera frugiperda GN=RpL10A PE=2
SV=1
Length = 217
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/161 (87%), Positives = 149/161 (92%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYECVN VL +K K+ FL+TVELQIGLKNYDPQKDKRFSGTVKLK+IPR
Sbjct: 1 MSSKVSRDTLYECVNAVLQASKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PKMQVC+LGDQQHCDEAK+ VP MD EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQI
Sbjct: 61 PKMQVCVLGDQQHCDEAKSLTVPCMDAEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVK TIKFQMKK
Sbjct: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKATIKFQMKK 161
>sp|Q9VTP4|R10AB_DROME 60S ribosomal protein L10a-2 OS=Drosophila melanogaster GN=RpL10Ab
PE=2 SV=2
Length = 217
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/161 (85%), Positives = 145/161 (90%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYE VNG+L + K+ FL+TVELQIGLKNYDPQKDKRFSGTVKLKHIPR
Sbjct: 1 MASKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PKM+VCILGDQQHCDEAKA NV FMD EALKKLNKNKKLVKKLAK YDAFLAS++LIKQI
Sbjct: 61 PKMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PRLLGPGLNKAGKFP LLSHQESM KI+EVK TIKFQMKK
Sbjct: 121 PRLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKK 161
>sp|P62907|RL10A_RAT 60S ribosomal protein L10a OS=Rattus norvegicus GN=Rpl10a PE=1 SV=2
Length = 217
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 141/161 (87%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYE V VL+ + +++FL+TVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PK VC+LGDQQHCDEAKA ++P MD+EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKK
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKK 161
>sp|P62906|RL10A_HUMAN 60S ribosomal protein L10a OS=Homo sapiens GN=RPL10A PE=1 SV=2
Length = 217
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 141/161 (87%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYE V VL+ + +++FL+TVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PK VC+LGDQQHCDEAKA ++P MD+EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKK
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKK 161
>sp|Q5E9E6|RL10A_BOVIN 60S ribosomal protein L10a OS=Bos taurus GN=RPL10A PE=2 SV=3
Length = 217
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 141/161 (87%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYE V VL+ + +++FL+TVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PK VC+LGDQQHCDEAKA ++P MD+EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKK
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKK 161
>sp|Q7ZYS8|RL10A_XENLA 60S ribosomal protein L10a OS=Xenopus laevis GN=rpl10a PE=2 SV=1
Length = 217
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 141/161 (87%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYE V VL +K K++FL+TVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLQGSKKKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PK +C+LGDQQHCDEAKA ++P MD+EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQI
Sbjct: 61 PKFSLCVLGDQQHCDEAKAVDLPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PR+LGPGLNKAGKFP LL+H E++ K+DEVK TIKFQMKK
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENLVAKVDEVKSTIKFQMKK 161
>sp|P53026|RL10A_MOUSE 60S ribosomal protein L10a OS=Mus musculus GN=Rpl10a PE=1 SV=3
Length = 217
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/161 (76%), Positives = 140/161 (86%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYE V VL+ + +++FL+TVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PK VC+LGDQQHCDE KA ++P MD+EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQI
Sbjct: 61 PKFSVCVLGDQQHCDERKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKK
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKK 161
>sp|Q90YV8|RL10A_ICTPU 60S ribosomal protein L10a OS=Ictalurus punctatus GN=rpl10a PE=2
SV=1
Length = 216
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/159 (76%), Positives = 138/159 (86%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SKVSRDTLYE V V + +++FL+TVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 2 SKVSRDTLYEAVREVQAGSISKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPK 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
VC+LGDQQHCDEAKAA +P MD+EALKKLNKNKK+VKKLAKKYDAFLAS++LIKQIPR
Sbjct: 62 FSVCVLGDQQHCDEAKAAEIPHMDIEALKKLNKNKKMVKKLAKKYDAFLASESLIKQIPR 121
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
+LGPGLNKAGKFP LL+H E++ K+DEVK TIKFQMKK
Sbjct: 122 ILGPGLNKAGKFPSLLTHNENLNTKVDEVKSTIKFQMKK 160
>sp|Q4R5P3|RL10A_MACFA 60S ribosomal protein L10a OS=Macaca fascicularis GN=RPL10A PE=2
SV=3
Length = 217
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/161 (75%), Positives = 140/161 (86%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYE V VL+ + +++FL+TVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PK VC+LGDQQHCDEAKA ++P MD+EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQI
Sbjct: 61 PKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PR+LGPGLNKAGKFP L+H E+M K+DEVK TIKFQMK+
Sbjct: 121 PRILGPGLNKAGKFPSPLTHNENMVAKVDEVKSTIKFQMKR 161
>sp|Q6PC69|RL10A_DANRE 60S ribosomal protein L10a OS=Danio rerio GN=rpl10a PE=2 SV=1
Length = 216
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/159 (77%), Positives = 139/159 (87%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SKVSRDTLYE V V ++ K++FL+TVELQI LKNYDPQKDKRFSGTV+LK PRPK
Sbjct: 2 SKVSRDTLYEAVKEVQAGSRRKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPK 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
VC+LGDQQHCDEAKAA +P MD+EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQIPR
Sbjct: 62 FSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 121
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
+LGPGLNKAGKFP LL+H E++ K+DEVK TIKFQMKK
Sbjct: 122 ILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKK 160
>sp|P53027|RL10A_PIG 60S ribosomal protein L10a (Fragment) OS=Sus scrofa GN=RPL10A PE=2
SV=3
Length = 165
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/161 (75%), Positives = 136/161 (84%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPR 60
M SKVSRDTLYE V VL+ + N +FL+TVELQI LKNYDPQKDKRFSGTV+LK PR
Sbjct: 1 MSSKVSRDTLYEAVREVLHGNQRNXXKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
PK VC LGDQQHCDEAKA ++P MD+EALKKLNKNKKLVKKLAKKYDAFLAS++LIKQI
Sbjct: 61 PKFSVCXLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 120
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
PR+LGPGLNKAGKFP LL+H M K+DEVK +KFQMK+
Sbjct: 121 PRILGPGLNKAGKFPSLLTHNXDMVAKVDEVKSRVKFQMKE 161
>sp|Q9N4I4|RL10A_CAEEL 60S ribosomal protein L10a OS=Caenorhabditis elegans GN=rpl-10a
PE=2 SV=1
Length = 216
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 130/159 (81%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SKVSR++L E + VL + ++F +T+ELQIGLKNYDPQKDKRFSG+++LKHIPRP
Sbjct: 2 SKVSRESLNEAIAEVLKGSSEKPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPN 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
M+VC+ GDQ H DEA A ++P M + LKKLNK KKL+KKLAK YDAF+AS++LIKQIPR
Sbjct: 62 MKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPR 121
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
+LGPGLNKAGKFP +++H ES+ K DE++ T+KFQMKK
Sbjct: 122 ILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKK 160
>sp|Q8VZB9|R10A1_ARATH 60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA
PE=2 SV=1
Length = 216
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/159 (65%), Positives = 132/159 (83%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SK+ + + E + + ++ K+ F++T+ELQIGLKNYDPQKDKRFSG+VKL HIPRPK
Sbjct: 2 SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
M++C+LGD QH +EA+ + MDVE+LKKLNKNKKLVKKLAKKY AFLAS+++IKQIPR
Sbjct: 62 MKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 121
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
LLGPGLNKAGKFP L+SHQES+ K++E K T+KFQ+KK
Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKK 160
>sp|P59230|R10A2_ARATH 60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB
PE=2 SV=1
Length = 216
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/159 (66%), Positives = 131/159 (82%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SK+ + + E + + ++ K+ F++TVELQIGLKNYDPQKDKRFSG+VKL HIPRPK
Sbjct: 2 SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
M++C+LGD QH +EA+ + MDVEALKKLNKNKKLVKKLAK Y AFLAS+++IKQIPR
Sbjct: 62 MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPR 121
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
LLGPGLNKAGKFP L+SHQES+ K++E K T+KFQ+KK
Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKK 160
>sp|P59231|R10A3_ARATH 60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC
PE=2 SV=1
Length = 217
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/160 (65%), Positives = 133/160 (83%), Gaps = 1/160 (0%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKR-FLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
SK+ + + E ++ ++ + K K R F +T+ELQIGLKNYDPQKDKRFSG+VKL H+PRP
Sbjct: 2 SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61
Query: 62 KMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIP 121
KM++C+LGD QH +EA+ + MDVEALKKLNKNKKLVKKLAKK+ AFLAS+++IKQIP
Sbjct: 62 KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIP 121
Query: 122 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
RLLGPGLNKAGKFP L+SHQES+ K++E K T+KFQ+KK
Sbjct: 122 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKK 161
>sp|Q86L05|RL10A_DICDI 60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a
PE=1 SV=1
Length = 217
Score = 186 bits (471), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/160 (58%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SK+S D + V+ + A+ +K+ FL+TVELQI LKNYD +KDKRFSG +K+ + +PK
Sbjct: 2 SKISSDQVRSIVSQLFKEAQESKRGFLETVELQINLKNYDTKKDKRFSGQIKIGTVTKPK 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLN-KNKKLVKKLAKKYDAFLASDALIKQIP 121
+ VC+ DQQHCDEA FMD+EALKK+ KNKK +KKL+KKYDAFLAS+++++Q+P
Sbjct: 62 LSVCVFADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQVP 121
Query: 122 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
+LLGPGLNK GKFP LL+H E M KI++VK T+KFQ+KK
Sbjct: 122 KLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKK 161
>sp|Q7RZS0|RL10A_NEUCR 60S ribosomal protein L10a OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rpl-10a PE=3 SV=1
Length = 217
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKR-FLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
SK+S + + V +L + KKR FL+TVELQIGLKNYDPQ+DKRFSGT++L IPRP
Sbjct: 2 SKISVAAVRQHVTDLLEYSNETKKRNFLETVELQIGLKNYDPQRDKRFSGTIRLPSIPRP 61
Query: 62 KMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIP 121
M +CILGDQ D AK V M V+ LKKLNKNKKL+KKLA+KYDAF+AS+ALIKQIP
Sbjct: 62 NMSICILGDQHDIDRAKHGGVDAMSVDDLKKLNKNKKLIKKLARKYDAFVASEALIKQIP 121
Query: 122 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
RLLGPGL+KAGKFP +SH + +T K++EVK TIKFQ+KK
Sbjct: 122 RLLGPGLSKAGKFPTPVSHSDDLTGKLNEVKSTIKFQLKK 161
>sp|O14363|RL1A_SCHPO 60S ribosomal protein L1-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl1a PE=1 SV=1
Length = 216
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 121/159 (76%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SKVS + V +L ++ K+ F +TVELQIGLKNYDPQ+DKRFSGT+KL ++PRP
Sbjct: 2 SKVSPANIRSSVETILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPN 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
M +CILGD D AK V M V+ LKKLNKNKKLVKKLAKKYDAF+AS+ LIKQIPR
Sbjct: 62 MSICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPR 121
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
LLGPGL+KAGKFP +SH + + KI EVK TIKFQ+KK
Sbjct: 122 LLGPGLSKAGKFPSPVSHSDDLYGKIIEVKSTIKFQLKK 160
>sp|O74836|RL1B_SCHPO 60S ribosomal protein L1-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl1b PE=1 SV=1
Length = 216
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 122/159 (76%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SKVS ++ V +L ++ K+ F +TVELQIGLKNYDPQ+DKRFSGT+KL ++PRP
Sbjct: 2 SKVSVASVRSNVEQILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPN 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
M +CILGD D AK V M V+ LKKLNKNKKLVKKLAKKYDAF+AS+ LIKQIPR
Sbjct: 62 MAICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPR 121
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
LLGPGL+KAGKFP +SH + + KI EVK TIKFQ+KK
Sbjct: 122 LLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKK 160
>sp|Q9UVJ4|RL10A_CANAL 60S ribosomal protein L10a OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=RPL10A PE=3 SV=2
Length = 217
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/160 (60%), Positives = 122/160 (76%), Gaps = 1/160 (0%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKR-FLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
SK++ + E V+ +L + KKR FL+TVELQ+GLKNYDPQ+DKRFSGT+KL +PRP
Sbjct: 2 SKITSSGVRENVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPRP 61
Query: 62 KMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIP 121
M +CI GD D AK+ V M V+ LKKLNKNKKL+KKLAKKY+AF+AS+ LIKQIP
Sbjct: 62 NMTICIFGDAFDVDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQIP 121
Query: 122 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
RLLGP L+KAGKFP +SH + + K+ +VK TIKFQ+KK
Sbjct: 122 RLLGPTLSKAGKFPTPVSHNDDLYSKVTDVKSTIKFQLKK 161
>sp|Q9SW75|RL10A_CHLRE 60S ribosomal protein L10a OS=Chlamydomonas reinhardtii GN=RPL10A
PE=2 SV=1
Length = 213
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 123/159 (77%), Gaps = 3/159 (1%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SK+S D L E V+ ++ AK ++F +TVELQIGLKNYDPQKDKRFSG+V+L +PRP+
Sbjct: 2 SKISNDVLRESVSALVEGAKTKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLPFVPRPR 61
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
M+V GD +HC++A A V VE LKKLNKNKKLVKKLA+ Y AFLASD++IKQIPR
Sbjct: 62 MRV-RAGDVKHCEQAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDSVIKQIPR 120
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
LLGPGLNKAGKFP ++ +++ + + + K +IKFQ+KK
Sbjct: 121 LLGPGLNKAGKFPAPIN--KNLEEMVLDTKCSIKFQLKK 157
>sp|Q6FRF5|RL10A_CANGA 60S ribosomal protein L10a OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL10A
PE=3 SV=1
Length = 217
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/160 (58%), Positives = 121/160 (75%), Gaps = 1/160 (0%)
Query: 3 SKVSRDTLYECVNGVLN-NAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
SK++ + E V +L +A+ K+ FL+TVELQ+GLKNYDPQ+DKRFSGT+KL PRP
Sbjct: 2 SKITTSHVRENVKELLKYSAETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPVCPRP 61
Query: 62 KMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIP 121
M +CI GD D AK+ V M V+ LKKLNKNKKL+KKL+KKY+AF+AS+ LIKQ+P
Sbjct: 62 NMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVP 121
Query: 122 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
RLLGP L+KAGKFP +SH + + K+ +V+ TIKFQ+KK
Sbjct: 122 RLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKK 161
>sp|P0CX44|RL1B_YEAST 60S ribosomal protein L1-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL1B PE=1 SV=1
Length = 217
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/160 (58%), Positives = 121/160 (75%), Gaps = 1/160 (0%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKR-FLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
SK++ + E V +L + KKR FL+TVELQ+GLKNYDPQ+DKRFSG++KL + PRP
Sbjct: 2 SKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRP 61
Query: 62 KMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIP 121
M +CI GD D AK+ V M V+ LKKLNKNKKL+KKL+KKY+AF+AS+ LIKQ+P
Sbjct: 62 NMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVP 121
Query: 122 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
RLLGP L+KAGKFP +SH + + K+ +V+ TIKFQ+KK
Sbjct: 122 RLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKK 161
>sp|P0CX43|RL1A_YEAST 60S ribosomal protein L1-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL1A PE=1 SV=1
Length = 217
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/160 (58%), Positives = 121/160 (75%), Gaps = 1/160 (0%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKR-FLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
SK++ + E V +L + KKR FL+TVELQ+GLKNYDPQ+DKRFSG++KL + PRP
Sbjct: 2 SKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRP 61
Query: 62 KMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIP 121
M +CI GD D AK+ V M V+ LKKLNKNKKL+KKL+KKY+AF+AS+ LIKQ+P
Sbjct: 62 NMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVP 121
Query: 122 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
RLLGP L+KAGKFP +SH + + K+ +V+ TIKFQ+KK
Sbjct: 122 RLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKK 161
>sp|Q755D9|RL10A_ASHGO 60S ribosomal protein L10a OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL10A PE=3
SV=1
Length = 217
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 120/160 (75%), Gaps = 1/160 (0%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKR-FLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
SK++ + + V +L + KKR FL+TVELQ+GLKNYDPQ+DKRFSGT+KL PRP
Sbjct: 2 SKITTTHVRDNVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPVCPRP 61
Query: 62 KMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIP 121
M VCI GD D AK+ V M V+ LKKLNKNKKL+KKLAKKY+AF+AS+ LIKQ+P
Sbjct: 62 NMSVCIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQVP 121
Query: 122 RLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
RLLGP L+KAGKFP +SH + + K+ +V+ TIKFQ+KK
Sbjct: 122 RLLGPQLSKAGKFPTPVSHNDDLYSKVTDVRSTIKFQLKK 161
>sp|P53028|RL10A_TRYBR 60S ribosomal protein L10a OS=Trypanosoma brucei rhodesiense
GN=RPL10A PE=2 SV=1
Length = 214
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 118/159 (74%), Gaps = 2/159 (1%)
Query: 3 SKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
SK+ L E + VL + K +++F ++++LQ+ LKNYDPQKDKRFSG+V+L H+ RP+
Sbjct: 2 SKIPPALLSEAIQNVLKDRK--ERKFKESIDLQVNLKNYDPQKDKRFSGSVRLPHVCRPR 59
Query: 63 MQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
M VC+L D H D AK +VP M+ E LKKLNKNKKLVKK+ +YDAFL S+++IK +PR
Sbjct: 60 MTVCLLCDLVHEDIAKKNDVPTMNQEELKKLNKNKKLVKKMCNQYDAFLCSESIIKTVPR 119
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
L+GP +++ GKFP + + ES+ K+ E++ T+KFQ+KK
Sbjct: 120 LVGPHMHRVGKFPTVCAQNESLPDKVLELQSTVKFQLKK 158
>sp|Q9NBJ7|RL10A_CAERE 60S ribosomal protein L10a (Fragment) OS=Caenorhabditis remanei
GN=rpl-10a PE=3 SV=1
Length = 112
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 94/112 (83%)
Query: 50 SGTVKLKHIPRPKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDA 109
SG+++LKHIPRP M+VC+ GDQ H DEA A N+P M + LKKLNK KKL+KKLAK YDA
Sbjct: 1 SGSIRLKHIPRPSMKVCVFGDQHHLDEAAAGNIPAMSADDLKKLNKQKKLIKKLAKSYDA 60
Query: 110 FLASDALIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKK 161
F+AS++LIKQIPR+LGPGLNKAGKFP +++H ES+ K DE++ T+KFQMKK
Sbjct: 61 FIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKK 112
>sp|O15613|RL10A_ENTHI 60S ribosomal protein L10a (Fragment) OS=Entamoeba histolytica
GN=RPL10A PE=2 SV=1
Length = 165
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 96/137 (70%)
Query: 25 KKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKAANVPF 84
+++F +T EL + LKNYDP KDKR GT KL ++ + +VC+LGD Q C+ A+ N+P
Sbjct: 18 ERKFGETGELHLALKNYDPDKDKRCGGTDKLPNVTKANYKVCVLGDAQACEAAQKENIPH 77
Query: 85 MDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLSHQESM 144
MDV+ALK L K+K KKLA+KY+ FL SD++ +Q+ ++LGPGLNK GKFP L E +
Sbjct: 78 MDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQKILGPGLNKGGKFPPPLGKNEDL 137
Query: 145 TQKIDEVKGTIKFQMKK 161
KI+E++ + Q+KK
Sbjct: 138 KVKINELQCQVNSQLKK 154
>sp|Q971J1|RL1_SULTO 50S ribosomal protein L1P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl1p PE=3 SV=2
Length = 219
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 14/151 (9%)
Query: 6 SRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHI-PRPK-- 62
S+D+L E + LN K+ F Q+VEL + K D +K G +KL+ I P PK
Sbjct: 4 SKDSLVEALKVALNPENNPKRNFTQSVELIVTFKGIDMKK-----GELKLREIVPLPKEP 58
Query: 63 ---MQVCILGDQQHCDEAKAA--NVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALI 117
+V ++ Q + AK A NV + E L+KL K+ +KKLA++ D FL + +
Sbjct: 59 SKPRKVLVIPAFQQIESAKKAEPNV-LLTKEELQKLQGQKRAIKKLARQNDWFLVAQDSM 117
Query: 118 KQIPRLLGPGLNKAGKFPGLLSHQESMTQKI 148
+ R+LGP L GKFP L + +T+ I
Sbjct: 118 ALVGRILGPALGPRGKFPTPLPNAADITEYI 148
>sp|O28782|RL1_ARCFU 50S ribosomal protein L1P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl1p PE=3 SV=1
Length = 215
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 5 VSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKH---IPR 60
V +D L + + + N K K+RF++TVE+ + L+N D +K + R V L H PR
Sbjct: 3 VDKDKLVKSIEEAIKNGK--KRRFVETVEMAVNLRNVDMKKPENRIDTVVNLPHGLGKPR 60
Query: 61 PKMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQI 120
K+ V GD + A+V + E + +L K+K+ KKLA D F+A L+ +I
Sbjct: 61 -KIGVFAKGDTALKAKEAGADV-VITPEEIDELAKDKRRAKKLANSIDFFIAEAPLMPEI 118
Query: 121 PRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 160
R LGP L GK P + ID ++ ++K + +
Sbjct: 119 GRKLGPVLGPRGKIPQPIPPLADPKPFIDRLRNSVKIRTR 158
>sp|Q5JH35|RL1_PYRKO 50S ribosomal protein L1P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl1p PE=3 SV=1
Length = 216
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 4/156 (2%)
Query: 7 RDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIPRPKMQV 65
R L E V A+ + F QTVE+ + LK+ D +K + RF V L H + ++
Sbjct: 5 RQKLVEAVKEA--KARAKPRNFTQTVEMAVNLKDVDLRKPENRFKLEVVLPHGRGKEPKI 62
Query: 66 CILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLG 125
++ D + AK + + E L++L K+ + +KLAKKYD F+A+ L+ +I R LG
Sbjct: 63 AVIADGAVAEAAKKLGLDVISGEELEELAKSPRQARKLAKKYDFFIAAAPLMPKIGRYLG 122
Query: 126 PGLNKAGKFPGLLSHQESMTQKIDE-VKGTIKFQMK 160
L K P ++ + + I E +K T++ Q+K
Sbjct: 123 RYLGPRNKMPVVVPPTMTNLEPIVEKLKKTVRIQLK 158
>sp|A7IAK4|RL1_METB6 50S ribosomal protein L1P OS=Methanoregula boonei (strain 6A8)
GN=rpl1p PE=3 SV=1
Length = 214
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Query: 5 VSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYD-PQKDKRFSGTVKLKHIPRPKM 63
V R + E V + A K++F +++++ I LKN D Q R T+ L + K
Sbjct: 2 VERAKILEAVTTAIEKAP--KRKFSESIDITINLKNIDMAQPKNRIDETILLPNGTGEKT 59
Query: 64 QVCILGDQQHCDEAKAANVPF-MDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
+C++G +AK A V + + +++L + +++A Y FLA A++ Q+ R
Sbjct: 60 GICVIGRGDIVTQAKDAKVDLILGPDEVERLGGAPREARRVASSYKYFLAETAVMPQVGR 119
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 160
LGP L G+ P + Q + ++ ++ ++K + K
Sbjct: 120 FLGPRLGPRGRMPMPIPGQTDIRPIVERLRNSVKIRTK 157
>sp|A1RRR1|RL1_PYRIL 50S ribosomal protein L1P OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rpl1p PE=3 SV=1
Length = 222
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIP 59
M + ++++ L + L N K +RF Q+VEL + L++ D K + R + V+L H P
Sbjct: 1 MSAVINKEVLLSKIKEALRNGK--PRRFRQSVELIVVLRDVDLNKPENRINLLVELPHPP 58
Query: 60 RPKMQVCILGDQQHCDEAKAANV-PFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIK 118
+P +V +AK A V + + ++ L NK+ ++KLAK+YD F+A L+
Sbjct: 59 KPN-KVAAFAHGAFETQAKNAGVDAIITRDQIESLAGNKRAIRKLAKQYDFFIAPPDLMP 117
Query: 119 QIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 160
+ R++GP GK P + + ++ +K +++ +++
Sbjct: 118 LLGRVIGPIFGPRGKMPEVAPPNVDIKALVERLKRSVRVRLR 159
>sp|P96038|RL1_SULSO 50S ribosomal protein L1P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl1p PE=1 SV=1
Length = 218
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 5 VSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIPRPKM 63
V R L + L+ K+ F+Q+VE+ + K D +K D + V L P
Sbjct: 4 VDRSNLEASLKLALSPENNPKRNFVQSVEIIVTFKEVDMKKGDLKLREIVVLPKPPEKTK 63
Query: 64 QVCILGDQQHCDEAKAANV-PFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPR 122
+V ++ Q + AK A + E L+KL NK+ +KK+A++ D FL + + + R
Sbjct: 64 KVLVVPTIQQLEYAKKAEPNTILTKEELQKLQGNKRAIKKIARQNDWFLIAPDSMALVGR 123
Query: 123 LLGPGLNKAGKFPGLLSHQESMTQKI 148
+LGP L GKFP L + +++ I
Sbjct: 124 ILGPALGPRGKFPTPLPNTADISEYI 149
>sp|Q9Y9W6|RL1_AERPE 50S ribosomal protein L1P OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl1p PE=3
SV=2
Length = 217
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 26 KRFLQTVELQIGLKNYD---PQKDKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKAANV 82
KRF Q+VE+ + LK+ D PQ R TV L + P + +VC++ +AK A V
Sbjct: 24 KRFKQSVEIIVALKDIDLKSPQA--RIRETVFLPNRPPKEAKVCVVAHGDMELQAKEAGV 81
Query: 83 PFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLSHQE 142
++ + L+ L++NK+ VKKLA++ L L+ R+LGP L GK P +
Sbjct: 82 EVLNRQDLQNLSQNKREVKKLARRCYWVLVRADLMGLAGRILGPALGPRGKAPVPVPPNA 141
Query: 143 SMTQKIDEVKGTIKFQMK 160
++ I+ K + +++
Sbjct: 142 NIKDLIERYKAAVWVRIR 159
>sp|Q8ZTT4|RL1_PYRAE 50S ribosomal protein L1P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl1p PE=3 SV=1
Length = 222
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIP 59
M + ++++TL + L K +RF Q+VEL + LK D K + R + V+L H P
Sbjct: 1 MSAVINKETLQAKIAEALKAGK--PRRFKQSVELIVVLKGVDLSKPENRINLLVELPHPP 58
Query: 60 RPKMQVCILGDQQHCDEAKAANV-PFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIK 118
+P ++ AK A V + + ++ L+ NK+ ++KLAK+YD F+A L+
Sbjct: 59 KPN-KIAAFAHGAFEVSAKNAGVDSIITRDQVEGLSGNKRAIRKLAKQYDFFIAPPDLMP 117
Query: 119 QIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 160
+ R++GP GK P ++ + ++ ++ ++ + +
Sbjct: 118 LLGRVVGPIFGPRGKMPEVVPPNVDVKSVVERLRKAVRVRFR 159
>sp|Q8TX51|RL1_METKA 50S ribosomal protein L1P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl1p PE=3 SV=1
Length = 214
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 26 KRFLQTVELQIGLKNYD-PQKDKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKAANVPF 84
+RFL+TV++ + +K D +R V L H + VC++ + + EA+ A
Sbjct: 22 RRFLETVDMIVNVKGVDLSDPSQRIDKEVVLPHGRGKPVNVCVIAEGEMAREAEEAGATV 81
Query: 85 MDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLSHQESM 144
++ E L++L +N + KK+A++++ F A L+ + R+LGP L GK + +
Sbjct: 82 INREKLEELAENVREAKKIARRHEFFYAQVDLMPDVGRVLGPVLGPRGKMAKPVPPNADI 141
Query: 145 TQKIDEVKGTIKFQMK 160
I+ T + +M+
Sbjct: 142 RALIERAHRTARVRMR 157
>sp|O57782|RL1_PYRHO 50S ribosomal protein L1P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl1p PE=3 SV=1
Length = 219
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 21 AKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKA 79
A+ + F Q+VE+ + LK+ D ++ + RF V L H +++ ++ D + A+
Sbjct: 20 ARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARR 79
Query: 80 ANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLS 139
+ + L+++ K+ + +KLAKKYD F+A L+ +I R LG L K P ++
Sbjct: 80 LGLDVISSAELEEIAKSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVP 139
Query: 140 HQESMTQKIDE-VKGTIKFQMK 160
+ + I E +K T++ Q+K
Sbjct: 140 PTMTNIEPIVEKLKKTVRIQLK 161
>sp|B1YAC8|RL1_PYRNV 50S ribosomal protein L1P OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rpl1p PE=3 SV=1
Length = 222
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 84/162 (51%), Gaps = 5/162 (3%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIP 59
M + ++++ L + L K +RF Q+VEL + L+ D K + R + V+L H P
Sbjct: 1 MSAVINKEALLAKIEEALRRGK--PRRFRQSVELILVLREVDLSKPENRINLLVELPHPP 58
Query: 60 RPKMQVCILGDQQHCDEAKAANV-PFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIK 118
+P +V +AK A V + + ++ L+ NK+ ++KLAK+YD F+A L+
Sbjct: 59 KPN-KVAAFAHGAFEVQAKNAGVDAVISRDQVEGLSGNKRAIRKLAKQYDFFIAPPDLMP 117
Query: 119 QIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 160
+ R++GP GK P + + ++ ++ +++ +++
Sbjct: 118 LLGRVVGPIFGPRGKMPEVAPPNVDVKSLVERLRRSVRVKLR 159
>sp|Q9UWR8|RL1_PYRAB 50S ribosomal protein L1P OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rpl1p PE=3 SV=1
Length = 219
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 21 AKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKA 79
A+ + F Q+VE+ + LK+ D ++ + RF V L H +++ ++ D + A+
Sbjct: 20 ARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARR 79
Query: 80 ANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLS 139
+ + L+++ ++ + +KLAKKYD F+A L+ +I R LG L K P ++
Sbjct: 80 LGLDVISSAELEEIAQSPRQARKLAKKYDFFIAEAPLMPKIGRYLGKYLGPRNKMPVVVP 139
Query: 140 HQESMTQKIDE-VKGTIKFQMK 160
S + I E +K T++ Q+K
Sbjct: 140 PTMSNLEPIVEKLKKTVRIQLK 161
>sp|A4YH88|RL1_METS5 50S ribosomal protein L1P OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rpl1p PE=3 SV=1
Length = 218
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 5 VSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKH---IPRP 61
V ++ + E V L+ K+ F Q+VEL I K+ D ++ G +KL+ +P+P
Sbjct: 3 VPKEKIEEAVKQALSKENNPKRGFTQSVELIIAFKDVDMKR-----GDIKLREAIVLPKP 57
Query: 62 KMQ---VCILGDQQHCDEAKAA--NVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDAL 116
+ V ++ + + AK A NV + E L+KL K+ VKKLA K FL +
Sbjct: 58 PSKPRNVLVVPSLEQMESAKRAEPNV-ILSKEELQKLQGAKRAVKKLASKNQWFLIAQDS 116
Query: 117 IKQIPRLLGPGLNKAGKFPGLLSHQESMTQKI 148
+ R+LGP L GKFP L +++ I
Sbjct: 117 MSLAGRILGPSLGPRGKFPTPLPSSSDVSEYI 148
>sp|Q8TZJ9|RL1_PYRFU 50S ribosomal protein L1P OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rpl1p PE=1 SV=1
Length = 216
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 21 AKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKA 79
A+ + F Q+VE+ + LK+ D ++ + RF V L H +++ ++ D + A+
Sbjct: 17 ARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARK 76
Query: 80 ANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLS 139
+ + L+++ + + +KLAKKYD F+A L+ +I R LG L K P ++
Sbjct: 77 LGLDVISSAELEEIASSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVP 136
Query: 140 HQ-ESMTQKIDEVKGTIKFQMK 160
+T ++++K T++ Q+K
Sbjct: 137 PTLTDLTPIVEKLKKTVRIQLK 158
>sp|A0B922|RL1_METTP 50S ribosomal protein L1P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl1p PE=3 SV=1
Length = 212
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 28 FLQTVELQIGLKNYD-PQKDKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKAANVPF-M 85
F ++V+L I L N D Q R V L H ++ + +AKAA + +
Sbjct: 21 FKESVDLAINLHNIDLTQPGNRVDTEVILPHGRGRPNRIAVFAAGDTALKAKAAGADYVI 80
Query: 86 DVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLSHQESMT 145
E LK L +N+K +KLA +YD F+A + I + LGP L K GK P L +
Sbjct: 81 SPEELKLLGENRKNARKLADEYDFFIAETQFMPVIGKTLGPILGKRGKMPTPLPPNADVA 140
Query: 146 QKIDEVKGTIKFQMK 160
Q I +K ++ + +
Sbjct: 141 QMISRLKNIVRIRSR 155
>sp|A3MX83|RL1_PYRCJ 50S ribosomal protein L1P OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rpl1p PE=3 SV=1
Length = 222
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIP 59
M + V R+ L + ++ L + K K+RF Q+VEL + L+ D K + R + V+L H P
Sbjct: 1 MSAVVQREALLKKIDEALKSGK--KRRFRQSVELIVVLRGIDLSKPENRINLLVELPHPP 58
Query: 60 RPKMQVCILGDQQHCDEAKAANV-PFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIK 118
+ ++ +AK A V + + ++ L NK+ ++KLAK+YD F+A L+
Sbjct: 59 K-LNKIAAFAHGAFETQAKNAGVDAVITRQEVEGLAGNKRAIRKLAKQYDFFIAPPDLMP 117
Query: 119 QIPRLLGPGLNKAGKFP 135
+ R++GP GK P
Sbjct: 118 LLGRVIGPIFGPRGKMP 134
>sp|P35024|RL1_SULAC 50S ribosomal protein L1P OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rpl1p PE=1 SV=2
Length = 221
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Query: 7 RDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHI-PRPKM-- 63
+++L E + L+ K+ F Q+VE+ + K D +K G +KL+ I P PK
Sbjct: 8 KESLIEALKLALSTEYNVKRNFTQSVEIILTFKGIDMKK-----GDLKLREIVPLPKQPS 62
Query: 64 ---QVCILGDQQHCDEAKAA--NVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIK 118
+V ++ + + AK A NV + E L+KL K+ VKKLA++ + FL + +
Sbjct: 63 KAKRVLVVPSFEQLEYAKKASPNV-VITREELQKLQGQKRPVKKLARQNEWFLINQESMA 121
Query: 119 QIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTI 155
R+LGP L GKFP L + +++ I+ K ++
Sbjct: 122 LAGRILGPALGPRGKFPTPLPNTADISEYINRFKRSV 158
>sp|A4WL88|RL1_PYRAR 50S ribosomal protein L1P OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rpl1p PE=3 SV=1
Length = 222
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 1 MQSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIP 59
M ++RD L + L K +RF Q+VEL + L+ D K + R + V+L H P
Sbjct: 1 MSVLLNRDVLTSKIAEALKAGK--PRRFRQSVELIVVLRELDLSKPENRINLLVELPHPP 58
Query: 60 RPKMQVCILGDQQHCDEAKAANV-PFMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIK 118
+ ++ AK A V + + ++ L+ NK+ ++KLAK+YD F+A L+
Sbjct: 59 KAN-KIAAFAHGVFEVNAKNAGVDAIITRDQIESLSGNKRAIRKLAKQYDFFIAPPDLMP 117
Query: 119 QIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 160
+ R++GP GK P ++ + ++ ++ +++ +++
Sbjct: 118 LLGRVVGPIFGPRGKMPEVVPPNVDVKSVVERLRRSVRVRIR 159
>sp|B1L6L3|RL1_KORCO 50S ribosomal protein L1P OS=Korarchaeum cryptofilum (strain OPF8)
GN=rpl1p PE=3 SV=1
Length = 226
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 25 KKRFLQTVELQIGLKNYDPQKD--KRFSGTVKLKHIPR-PKMQVCILGDQQHCDEAKAAN 81
K+RF + V+L + L+ D ++D + + V+L H PR K +V ++G + +AK A
Sbjct: 23 KRRFNEAVDLVVVLRGIDLKRDPNAKINEVVELPHSPRNRKTKVAVIGKGEFLSKAKEAG 82
Query: 82 VP-FMDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFP 135
++ E ++ + NK+ +KKLA +YD F+A ++ +I + +GP L K P
Sbjct: 83 ADRVLEPEEIEAIAANKRALKKLANEYDFFIAQADVLPKIVKYIGPVLGPRNKMP 137
>sp|A0RX07|RL1_CENSY 50S ribosomal protein L1P OS=Cenarchaeum symbiosum (strain A)
GN=rpl1p PE=3 SV=1
Length = 215
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 24 NKKRFLQTVELQIGLKNYDPQKDKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKAANVP 83
+K+ F QT+E + K+ D +K + TV+L P VC+L AK A
Sbjct: 18 DKRNFTQTLEFIMVFKDIDIKKGFAINETVQLPKTSSPS-TVCVLASGDMGVRAKNAKAD 76
Query: 84 FM-DVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLSHQE 142
+ D + L+KL NK+ +K +YD FLA L+ + ++LG L GK P ++
Sbjct: 77 MVVDADGLEKLGTNKRESRKFINRYDFFLADTQLMPVVGKVLGQILGPRGKMPTPVAFNA 136
Query: 143 SMTQKIDEVKGTIKFQMK 160
+ ++ + +++ + +
Sbjct: 137 PIESFLERFRSSVRVRAR 154
>sp|A1RWQ3|RL1_THEPD 50S ribosomal protein L1P OS=Thermofilum pendens (strain Hrk 5)
GN=rpl1p PE=3 SV=1
Length = 225
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Query: 2 QSKVSRDTLYECVNGVLNNAKVNKKRFLQTVELQIGLKNYDPQK-DKRFSGTVKLKHIPR 60
Q+ V+ +L E + L ++ K+RF Q+VE+ + L++ D +K + R + V L H P
Sbjct: 4 QTLVAAGSLEEAIKEALVSSP-KKRRFTQSVEMIVTLRDVDVKKPENRLNTVVALPH-PA 61
Query: 61 P----KMQVCILGDQQHCDEAKAANVPFMDVEALKKLNKNKKLVKKLAKKYDAFLASDAL 116
P K+ V GD + A++ +D + L+K+ +KK KKLAK+YD FLA L
Sbjct: 62 PGKLAKVAVIASGDTALKAKEAGADI-VVDKDELQKIGNDKKAAKKLAKRYDFFLAQPDL 120
Query: 117 IKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMK 160
+ + R+LG L GK P + ++ I+ + +++ +MK
Sbjct: 121 MPLVGRVLGKYLGPRGKMPQPIPPNVALDALIERFRRSVRIRMK 164
>sp|Q2FQ32|RL1_METHJ 50S ribosomal protein L1P OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rpl1p PE=3 SV=1
Length = 215
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 25 KKRFLQTVELQIGLKNYD-PQKDKRFSGTVKLKHIPRPKMQVCILGDQQHCDEAKAANVP 83
+++F ++V++ I LKN D Q R T+ L H +++ +LG +A+ + V
Sbjct: 20 ERKFTESVDMTINLKNIDMSQPKNRIDETILLPHGNGRVVKIAVLGSGDIVTQARESGVE 79
Query: 84 F-MDVEALKKLNKNKKLVKKLAKKYDAFLASDALIKQIPRLLGPGLNKAGKFPGLLSHQE 142
M E +++L + +K+A ++ FLA ++ + R LGP L G+ P +
Sbjct: 80 LIMGPEEIERLGGAPREARKIASEHQFFLAETQVMSLVGRWLGPRLGPRGRMPQPIPAGT 139
Query: 143 SMTQKIDEVKGTIKFQMK 160
+ ++ ++ ++K + K
Sbjct: 140 DIRPIVERLRKSVKIRTK 157
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,572,517
Number of Sequences: 539616
Number of extensions: 2177059
Number of successful extensions: 7408
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 7192
Number of HSP's gapped (non-prelim): 441
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)