Query psy8484
Match_columns 132
No_of_seqs 174 out of 1156
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 20:04:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8484.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8484hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.1 1E-10 3.6E-15 94.0 7.2 76 52-132 160-237 (324)
2 2vj2_A Jagged-1; signalling, p 99.0 4.3E-10 1.5E-14 82.3 5.7 76 52-132 45-122 (169)
3 2ygq_A WIF-1, WNT inhibitory f 99.0 2.9E-10 1E-14 91.4 3.8 76 52-132 192-269 (324)
4 2vj2_A Jagged-1; signalling, p 98.9 3.3E-10 1.1E-14 83.0 3.2 73 56-132 16-91 (169)
5 2wg3_C Hedgehog-interacting pr 98.9 1.9E-10 6.5E-15 96.3 0.5 69 59-132 379-448 (463)
6 4d90_A EGF-like repeat and dis 98.6 5.8E-08 2E-12 68.2 5.2 74 56-132 22-126 (143)
7 2vj3_A Neurogenic locus notch 98.5 2.1E-07 7.1E-12 65.3 5.8 74 56-132 27-112 (135)
8 2p28_B Integrin beta-2; hybrid 98.5 1.9E-07 6.6E-12 71.4 5.6 73 57-132 107-207 (217)
9 2gy5_A Angiopoietin-1 receptor 98.5 1.3E-07 4.5E-12 78.4 5.0 71 58-132 186-271 (423)
10 3fcs_B Integrin beta-3; beta p 98.4 5.7E-07 2E-11 78.8 7.0 74 56-132 503-593 (690)
11 2gy5_A Angiopoietin-1 receptor 98.4 5.4E-07 1.8E-11 74.8 6.1 77 56-132 215-313 (423)
12 3fcs_B Integrin beta-3; beta p 98.3 3.8E-07 1.3E-11 80.0 5.1 75 56-132 457-553 (690)
13 1z1y_A Ookinete surface protei 98.3 4.3E-07 1.5E-11 66.7 4.2 76 56-132 73-168 (186)
14 1z1y_A Ookinete surface protei 98.3 2.1E-07 7.1E-12 68.4 1.9 75 56-132 24-124 (186)
15 3k6s_B Integrin beta-2; cell r 98.3 7.4E-07 2.5E-11 78.1 5.0 74 56-132 445-546 (687)
16 2ygo_A WIF-1, WNT inhibitory f 98.2 9.4E-07 3.2E-11 66.4 3.4 33 71-104 145-179 (188)
17 3k6s_B Integrin beta-2; cell r 98.1 1.8E-06 6E-11 75.8 4.9 73 57-132 493-585 (687)
18 1tpg_A T-plasminogen activator 98.1 1.1E-06 3.7E-11 58.2 2.5 68 57-132 2-79 (91)
19 1dx5_I Thrombomodulin; serine 98.1 1.1E-06 3.8E-11 60.5 2.1 74 56-132 23-108 (118)
20 2bou_A EGF-like module contain 98.1 5.5E-06 1.9E-10 58.3 5.8 77 56-132 18-127 (143)
21 2wg3_C Hedgehog-interacting pr 98.0 2.6E-06 8.9E-11 71.2 2.9 52 51-104 402-454 (463)
22 4d90_A EGF-like repeat and dis 97.8 2.3E-05 7.9E-10 54.7 4.4 52 78-132 6-88 (143)
23 1emn_A Fibrillin; extracellula 97.7 1.5E-05 5.3E-10 51.4 2.9 53 78-132 12-73 (82)
24 2bou_A EGF-like module contain 97.7 2.7E-05 9.1E-10 54.7 3.9 57 76-132 5-76 (143)
25 2vj3_A Neurogenic locus notch 97.6 4.7E-05 1.6E-09 53.1 3.9 52 78-132 13-74 (135)
26 2p28_B Integrin beta-2; hybrid 97.5 6E-05 2E-09 57.5 4.0 52 79-132 97-162 (217)
27 1yo8_A Thrombospondin-2; EGF, 97.2 0.00023 7.8E-09 61.9 4.5 75 57-132 25-137 (634)
28 1lmj_A Fibrillin 1; EGF, calci 97.2 7.8E-05 2.7E-09 48.3 0.7 54 79-132 12-76 (86)
29 3h5c_B Vitamin K-dependent pro 97.1 0.00033 1.1E-08 54.7 4.1 53 78-132 11-73 (317)
30 1aut_L Activated protein C; se 97.1 0.00042 1.4E-08 47.0 3.6 31 89-121 75-107 (114)
31 1emn_A Fibrillin; extracellula 97.0 0.00046 1.6E-08 44.3 3.3 46 56-101 25-77 (82)
32 1x7a_L Coagulation factor IX, 97.0 0.00047 1.6E-08 49.0 3.4 52 78-132 54-115 (146)
33 1tpg_A T-plasminogen activator 97.0 0.00057 2E-08 44.8 3.6 44 56-104 31-85 (91)
34 2e26_A Reelin, reeler protein; 97.0 0.00037 1.3E-08 61.4 3.1 44 59-104 520-564 (725)
35 1dx5_I Thrombomodulin; serine 97.0 0.0003 1E-08 48.1 2.0 52 78-132 10-69 (118)
36 3ca7_A Protein spitz; argos, E 96.8 0.00013 4.4E-09 43.4 -0.6 37 57-104 3-47 (52)
37 2c4f_L Coagulation factor VII 96.8 0.00088 3E-08 47.2 3.4 52 78-132 53-118 (142)
38 1nfu_B Coagulation factor XA, 96.8 0.00024 8.3E-09 53.3 0.4 53 78-132 48-110 (195)
39 2vh0_B Activated factor XA lig 96.7 0.0003 1E-08 49.2 0.4 52 78-132 48-110 (134)
40 2ygo_A WIF-1, WNT inhibitory f 96.7 0.001 3.6E-08 49.8 3.2 23 110-132 149-173 (188)
41 2w86_A Fibrillin-1, fibrillin1 96.7 0.00025 8.4E-09 49.9 -0.3 43 89-132 88-137 (147)
42 1k36_A Epiregulin; EGF-like fo 96.4 0.0015 5E-08 37.9 2.1 26 78-104 12-42 (46)
43 1uzk_A Fibrillin-1; glycoprote 96.4 0.00019 6.7E-09 51.3 -2.3 29 104-132 121-152 (162)
44 3u7u_G Neuregulin 1; signaling 96.1 0.0036 1.2E-07 37.8 2.7 26 78-104 14-48 (55)
45 1a3p_A Epidermal growth factor 96.0 0.004 1.4E-07 35.6 2.5 25 79-104 10-40 (45)
46 4aqs_A Laminin subunit beta-1; 95.9 0.0032 1.1E-07 52.9 2.4 44 88-132 459-518 (525)
47 1egf_A Epidermal growth factor 95.9 0.0072 2.5E-07 35.7 3.3 25 79-104 13-43 (53)
48 2w2n_E LDL receptor, low-densi 95.9 0.004 1.4E-07 42.0 2.3 72 57-132 14-97 (107)
49 1aut_L Activated protein C; se 95.8 0.019 6.5E-07 38.6 5.6 54 76-132 18-83 (114)
50 1hae_A Heregulin-alpha; growth 95.4 0.008 2.7E-07 36.6 2.1 26 78-104 12-46 (63)
51 1edm_B Factor IX; epidermal gr 95.1 0.013 4.4E-07 32.1 2.3 24 78-101 9-36 (39)
52 1nql_B Epidermal growth factor 95.1 0.0081 2.8E-07 35.7 1.5 33 71-104 5-43 (53)
53 1z6c_A Vitamin K-dependent pro 95.1 0.0093 3.2E-07 38.3 1.9 50 80-132 13-74 (87)
54 1yo8_A Thrombospondin-2; EGF, 94.9 0.038 1.3E-06 48.1 5.8 45 56-100 69-140 (634)
55 1lmj_A Fibrillin 1; EGF, calci 94.9 0.0078 2.7E-07 38.6 1.2 46 56-101 24-80 (86)
56 2p26_A Integrin beta-2; hybrid 94.8 0.013 4.5E-07 46.1 2.5 51 80-132 198-262 (280)
57 3ltf_D Protein spitz; receptor 94.0 0.02 6.7E-07 34.7 1.5 25 79-104 15-47 (58)
58 1edm_B Factor IX; epidermal gr 93.9 0.028 9.5E-07 30.7 1.8 25 106-132 4-32 (39)
59 2w86_A Fibrillin-1, fibrillin1 93.8 0.023 8E-07 39.5 1.8 45 57-101 88-141 (147)
60 3zyj_B Netrin-G1; cell adhesio 93.8 0.018 6.2E-07 47.9 1.3 42 79-128 372-416 (426)
61 1klo_A Laminin; glycoprotein; 93.6 0.048 1.6E-06 39.1 3.2 50 83-132 68-139 (162)
62 3u7u_G Neuregulin 1; signaling 93.5 0.03 1E-06 33.6 1.6 24 107-132 10-42 (55)
63 2e26_A Reelin, reeler protein; 93.5 0.013 4.6E-07 51.6 0.1 37 91-132 520-558 (725)
64 3h5c_B Vitamin K-dependent pro 93.1 0.1 3.5E-06 40.4 4.5 45 56-101 25-77 (317)
65 2rnl_A Amphiregulin; AR, color 93.0 0.062 2.1E-06 31.7 2.4 33 71-104 11-48 (50)
66 2w2n_E LDL receptor, low-densi 92.8 0.042 1.5E-06 36.8 1.7 45 56-101 49-101 (107)
67 1nfu_B Coagulation factor XA, 92.7 0.055 1.9E-06 40.3 2.3 41 56-99 62-112 (195)
68 2k2s_B Micronemal protein 6; m 92.4 0.077 2.6E-06 32.4 2.3 24 78-101 17-47 (61)
69 1k36_A Epiregulin; EGF-like fo 92.3 0.039 1.3E-06 31.7 0.9 19 114-132 13-36 (46)
70 3zyj_B Netrin-G1; cell adhesio 92.3 0.051 1.7E-06 45.2 1.9 70 57-132 313-391 (426)
71 1x7a_L Coagulation factor IX, 92.1 0.18 6.3E-06 35.3 4.4 44 56-100 68-118 (146)
72 3e50_C Protransforming growth 92.1 0.092 3.1E-06 31.0 2.3 27 77-104 13-44 (50)
73 2p26_A Integrin beta-2; hybrid 91.6 0.14 4.7E-06 40.2 3.6 43 57-100 207-265 (280)
74 1ob1_C Major merozoite surface 91.4 0.26 8.7E-06 33.2 4.2 59 35-100 11-85 (99)
75 2vh0_B Activated factor XA lig 91.3 0.13 4.6E-06 35.4 2.8 41 56-99 62-112 (134)
76 1klo_A Laminin; glycoprotein; 90.7 0.07 2.4E-06 38.2 0.9 15 118-132 68-84 (162)
77 1z6c_A Vitamin K-dependent pro 90.6 0.23 7.7E-06 31.6 3.2 44 56-101 24-75 (87)
78 3p5b_L Low density lipoprotein 90.5 0.13 4.5E-06 41.2 2.5 12 89-100 60-71 (400)
79 2ddu_A Reelin; beta-jelly-roll 90.1 0.1 3.4E-06 42.9 1.5 27 74-101 192-219 (387)
80 1n1i_A Merozoite surface prote 90.0 0.32 1.1E-05 33.0 3.8 52 79-132 17-83 (105)
81 3v65_B Low-density lipoprotein 89.6 0.11 3.8E-06 41.2 1.4 43 57-100 24-75 (386)
82 1uzk_A Fibrillin-1; glycoprote 89.4 0.078 2.7E-06 37.4 0.3 44 58-101 101-156 (162)
83 1hae_A Heregulin-alpha; growth 89.0 0.099 3.4E-06 31.5 0.5 19 114-132 13-40 (63)
84 2fd6_A Urokinase-type plasmino 88.9 0.19 6.4E-06 34.4 2.0 26 79-105 2-34 (122)
85 1egf_A Epidermal growth factor 88.7 0.23 7.7E-06 29.0 2.0 19 114-132 13-37 (53)
86 2i9a_A Urokinase-type plasmino 88.5 0.2 7E-06 35.4 2.0 26 79-105 14-46 (145)
87 1xdt_R Hbegf, heparin-binding 88.4 0.3 1E-05 31.5 2.5 27 77-104 45-76 (79)
88 2k2s_B Micronemal protein 6; m 87.6 0.16 5.5E-06 31.0 0.8 25 106-132 12-42 (61)
89 1iox_A Betacellulin; EGF-like 87.4 0.27 9.1E-06 28.8 1.7 26 78-104 14-44 (50)
90 1ob1_C Major merozoite surface 87.1 1.2 4E-05 29.9 4.9 50 79-132 11-82 (99)
91 4fbr_A Lectin, myxobacterial h 86.6 0.019 6.6E-07 45.0 -4.7 14 56-69 52-65 (267)
92 2c4f_L Coagulation factor VII 86.0 0.56 1.9E-05 32.5 3.0 44 56-99 67-120 (142)
93 4fbr_A Lectin, myxobacterial h 85.7 0.012 4.2E-07 46.1 -6.3 23 79-101 106-132 (267)
94 4aqs_A Laminin subunit beta-1; 85.3 0.24 8.3E-06 41.3 1.0 48 56-104 459-524 (525)
95 1n7d_A LDL receptor, low-densi 84.6 0.66 2.2E-05 40.0 3.4 43 88-132 314-362 (699)
96 1n1i_A Merozoite surface prote 81.9 1.5 5.2E-05 29.6 3.7 59 34-99 16-85 (105)
97 3p5b_L Low density lipoprotein 81.6 0.86 3E-05 36.3 2.8 43 88-132 20-68 (400)
98 1g1s_A P-selectin; selectin, l 81.5 0.41 1.4E-05 33.2 0.8 26 78-104 125-154 (162)
99 3nt1_A Prostaglandin-endoperox 81.3 0.64 2.2E-05 40.0 2.0 28 77-105 6-39 (587)
100 3m0c_C LDL receptor, low-densi 80.2 0.95 3.3E-05 39.9 2.8 10 90-99 334-343 (791)
101 1q4g_A Prostaglandin G/H synth 80.0 0.61 2.1E-05 39.7 1.5 27 78-105 8-40 (553)
102 2ddu_A Reelin; beta-jelly-roll 74.6 0.93 3.2E-05 37.2 1.0 23 109-132 191-215 (387)
103 3v65_B Low-density lipoprotein 74.5 1.3 4.4E-05 35.0 1.9 53 76-132 13-72 (386)
104 1n7d_A LDL receptor, low-densi 69.3 5.9 0.0002 34.0 4.9 54 78-132 261-323 (699)
105 1b9w_A Protein (merozoite surf 67.0 5.7 0.0002 26.3 3.4 41 34-81 10-50 (95)
106 3fl7_A Ephrin receptor; ATP-bi 65.4 6.8 0.00023 33.0 4.4 18 83-100 256-274 (536)
107 3cfw_A L-selectin; EGF, cell a 64.2 3.3 0.00011 28.5 1.9 26 78-104 125-154 (164)
108 1apq_A Complement protease C1R 59.2 8.3 0.00028 21.4 2.8 22 79-101 21-45 (53)
109 1g1t_A E-selectin; EGF, adhesi 58.1 2.9 9.9E-05 28.5 0.7 33 71-104 116-154 (157)
110 3g5c_A ADAM 22; alpha/beta fol 50.8 7.8 0.00027 32.6 2.3 25 79-104 455-480 (510)
111 1cmr_A Charybdotoxin, alpha ch 50.2 11 0.00038 19.8 2.1 11 82-93 19-29 (31)
112 3ssb_I IMPI alpha, inducible m 48.2 6.2 0.00021 20.8 0.9 11 58-68 6-16 (32)
113 3asi_A Neurexin-1-alpha; beta- 47.2 10 0.00035 30.1 2.4 26 78-104 191-221 (410)
114 1wz5_A Potassium channel block 41.3 7.2 0.00025 21.1 0.5 11 82-93 22-32 (35)
115 3g5c_A ADAM 22; alpha/beta fol 41.3 9.1 0.00031 32.2 1.3 19 114-132 455-474 (510)
116 2hr7_A Insulin receptor; hormo 41.1 16 0.00055 30.4 2.8 24 71-95 187-210 (486)
117 1gl4_A Nidogen-1, entactin; im 38.1 13 0.00044 29.1 1.6 19 57-75 28-46 (285)
118 1gl4_A Nidogen-1, entactin; im 37.0 16 0.00054 28.6 2.0 24 78-101 13-40 (285)
119 3k51_B Decoy receptor 3; DCR3, 36.7 71 0.0024 22.7 5.4 55 54-110 81-143 (176)
120 1r1g_A Neurotoxin BMK37, BMBKT 34.0 2.1 7.2E-05 22.6 -2.5 11 82-93 19-29 (31)
121 4aqt_A Laminin subunit gamma-1 33.2 21 0.00071 28.8 2.2 13 89-101 272-284 (375)
122 1pjv_A Cobatoxin 1, COTX1, GTI 30.7 2.5 8.6E-05 22.5 -2.5 11 82-93 19-29 (32)
123 2ddl_A Leiurotoxin, LEI4P; sco 30.6 3.7 0.00013 22.0 -1.8 14 114-128 17-30 (33)
124 3qcw_A Neurexin-1-alpha; synap 29.8 22 0.00075 32.7 1.9 26 78-104 1023-1053(1245)
125 1jlz_A Tityustoxin alpha-KTX; 27.9 23 0.00079 17.9 1.0 13 81-94 11-23 (26)
126 2y38_A Laminin subunit alpha-5 27.3 26 0.00088 28.7 1.8 12 90-101 287-298 (403)
127 1bah_A Charybdotoxin, chabii; 26.9 12 0.00042 20.4 -0.2 13 115-128 23-35 (37)
128 3qcw_A Neurexin-1-alpha; synap 26.6 35 0.0012 31.3 2.7 26 78-104 625-655 (1245)
129 3urf_Z Tumor necrosis factor r 26.5 1.1E+02 0.0039 21.5 5.0 55 54-110 79-141 (171)
130 1wmt_A ISTX; neurotoxin, potas 25.8 31 0.0011 19.1 1.4 23 72-95 13-37 (41)
131 1tsk_A TS KAPA; scorpion, toxi 23.0 18 0.00063 19.4 0.1 7 116-122 24-30 (35)
132 2p3f_N Anti-coagulant protein 22.8 42 0.0014 20.8 1.8 10 90-99 48-57 (78)
133 3t3p_B Integrin beta-3; integr 22.0 29 0.001 29.0 1.2 22 79-101 447-470 (472)
134 1c49_A Toxin K-beta; scorpion 20.2 36 0.0012 18.2 0.9 22 72-94 10-33 (35)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.12 E-value=1e-10 Score=93.98 Aligned_cols=76 Identities=28% Similarity=0.813 Sum_probs=60.0
Q ss_pred eecCCCceEeCCCceeCCCceecccCCCCCC-cEEcCCCeEEccCCceeccCCCCCccccCCCCCC-CCEEcCCCceeCC
Q psy8484 52 YMEDTHVRICCEGYEDDHGSCRPVCERECVF-GSCTSPNQCTCSPGYVVINEASPNICEPHCAECV-NGVCSAPNTCDCL 129 (132)
Q Consensus 52 ~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~-nG~C~~p~~C~C~ 129 (132)
.+...+.|.|.+||+|...+ .+.|..+|.| |.|+.++.|.|++||.|.. |+...|.. .|. +|+|+.+++|.|+
T Consensus 160 ~C~~~~~C~C~~G~~G~~C~-~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~-C~~~~C~~---~C~~~G~C~~~~~C~C~ 234 (324)
T 2ygq_A 160 FCNERRICECPDGFHGPHCE-KALCTPRCMNGGLCVTPGFCICPPGFYGVN-CDKANCST---TCFNGGTCFYPGKCICP 234 (324)
T ss_dssp EECTTSCEECCTTEESSSSC-EESSSSCCCTTCEECSSCCEECCTTCBTTT-TCBCCCSS---CCCSSCCBSCSSCBCCC
T ss_pred EECCCCeEECCCCCcCCCCC-CCCCCCCCCCCCEEcCCCEEeCCCCccCCC-cccCcCCC---CCCCCCeeCCCCeeeCC
Confidence 34446789999999997543 5678888985 9999999999999999987 76555543 555 4788888889998
Q ss_pred CCC
Q psy8484 130 DVL 132 (132)
Q Consensus 130 ~G~ 132 (132)
+||
T Consensus 235 ~G~ 237 (324)
T 2ygq_A 235 PGL 237 (324)
T ss_dssp TTC
T ss_pred CCc
Confidence 887
No 2
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.00 E-value=4.3e-10 Score=82.34 Aligned_cols=76 Identities=30% Similarity=0.799 Sum_probs=42.1
Q ss_pred eecCCCceEeCCCceeCCCceecccCCCC--CCcEEcCCCeEEccCCceeccCCCCCccccCCCCCCCCEEcCCCceeCC
Q psy8484 52 YMEDTHVRICCEGYEDDHGSCRPVCEREC--VFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCL 129 (132)
Q Consensus 52 ~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C--~nG~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~nG~C~~p~~C~C~ 129 (132)
.+.....|.|.+||+|.... .++|...| .||.|+.+++|.|++||.|.. |+ .|... ..|.||+|+.+++|.|+
T Consensus 45 ~C~~~g~C~C~~G~~G~~C~-~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~-C~--~C~~~-~~C~~g~C~~~~~C~C~ 119 (169)
T 2vj2_A 45 ACDQNGNKTCMEGWMGPECN-RAICRQGCSPKHGSCKLPGDCRCQYGWQGLY-CD--KCIPH-PGCVHGICNEPWQCLCE 119 (169)
T ss_dssp EECSSCCEEECTTEESTTSC-EECCCTTCCTTTEECSSTTCCEECTTEESSS-SC--EECCC-TTCSSEECSSTTCCEEC
T ss_pred EeCCCCeeECCCCCcCCCCC-CCCCCCCCCCCCcccCCCCeeECCCCCCCCC-cc--cCCCC-CCCCCCCcCCCCEEeCC
Confidence 44445667777777776332 45565556 356676666777777777665 32 12211 02455555555555555
Q ss_pred CCC
Q psy8484 130 DVL 132 (132)
Q Consensus 130 ~G~ 132 (132)
+||
T Consensus 120 ~G~ 122 (169)
T 2vj2_A 120 TNW 122 (169)
T ss_dssp TTE
T ss_pred CCC
Confidence 554
No 3
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.96 E-value=2.9e-10 Score=91.36 Aligned_cols=76 Identities=25% Similarity=0.622 Sum_probs=39.2
Q ss_pred eecCCCceEeCCCceeCCCceecccCCCCCC-cEEcCCCeEEccCCceeccCCCCCccccCCCCCCC-CEEcCCCceeCC
Q psy8484 52 YMEDTHVRICCEGYEDDHGSCRPVCERECVF-GSCTSPNQCTCSPGYVVINEASPNICEPHCAECVN-GVCSAPNTCDCL 129 (132)
Q Consensus 52 ~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~p~~C~C~ 129 (132)
.+...+.|.|.+||+|.... .+.|..+|.| |+|+.+++|.|++||.|.. |+...|.. +|.| |.|++.++|.|+
T Consensus 192 ~C~~~~~C~C~~G~~G~~C~-~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~-C~~~~C~~---~C~~~g~C~~~~~C~C~ 266 (324)
T 2ygq_A 192 LCVTPGFCICPPGFYGVNCD-KANCSTTCFNGGTCFYPGKCICPPGLEGEQ-CEISKCPQ---PCRNGGKCIGKSKCKCS 266 (324)
T ss_dssp EECSSCCEECCTTCBTTTTC-BCCCSSCCCSSCCBSCSSCBCCCTTCCTTT-TC--------------------------
T ss_pred EEcCCCEEeCCCCccCCCcc-cCcCCCCCCCCCeeCCCCeeeCCCCccCCC-CCcCcCCC---cCCCCCEECCCCEEECC
Confidence 33445789999999987543 5667778885 8898888899999998886 66544432 4553 677766777777
Q ss_pred CCC
Q psy8484 130 DVL 132 (132)
Q Consensus 130 ~G~ 132 (132)
+||
T Consensus 267 ~G~ 269 (324)
T 2ygq_A 267 KGY 269 (324)
T ss_dssp ---
T ss_pred CCC
Confidence 766
No 4
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.94 E-value=3.3e-10 Score=82.95 Aligned_cols=73 Identities=22% Similarity=0.522 Sum_probs=53.8
Q ss_pred CCceEeCCCceeCCCceecccCC--CCC-CcEEcCCCeEEccCCceeccCCCCCccccCCCCCCCCEEcCCCceeCCCCC
Q psy8484 56 THVRICCEGYEDDHGSCRPVCER--ECV-FGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVNGVCSAPNTCDCLDVL 132 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C~~~C~~--~C~-nG~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~nG~C~~p~~C~C~~G~ 132 (132)
...+.|.+||.|.. |+..|.. .|. ||+|..+++|.|.+||.|.. |+...|...| .+.||.|+++++|.|++||
T Consensus 16 ~~~c~C~~g~~G~~--C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~-C~~~~C~~~C-~~~~g~C~~~~~C~C~~G~ 91 (169)
T 2vj2_A 16 RSAVTCDDYYYGFG--CNKFCRPRDDFFGHYACDQNGNKTCMEGWMGPE-CNRAICRQGC-SPKHGSCKLPGDCRCQYGW 91 (169)
T ss_dssp -----CCTTEETTT--TCEECCCEEETTEEEEECSSCCEEECTTEESTT-SCEECCCTTC-CTTTEECSSTTCCEECTTE
T ss_pred CeeeeCCCcCcCCC--cccccCCCCCcCCCCEeCCCCeeECCCCCcCCC-CCCCCCCCCC-CCCCcccCCCCeeECCCCC
Confidence 56799999999975 5455653 566 59999999999999999987 7655554433 2368999999999999997
No 5
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.90 E-value=1.9e-10 Score=96.30 Aligned_cols=69 Identities=33% Similarity=0.728 Sum_probs=39.5
Q ss_pred eEeCCCceeCCCceecccCCCCCCcEEcCCCeEEccCCceeccCCCCCccccCCCCCCC-CEEcCCCceeCCCCC
Q psy8484 59 RICCEGYEDDHGSCRPVCERECVFGSCTSPNQCTCSPGYVVINEASPNICEPHCAECVN-GVCSAPNTCDCLDVL 132 (132)
Q Consensus 59 c~C~~Gy~~~~~~C~~~C~~~C~nG~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~p~~C~C~~G~ 132 (132)
..|.+||.+..+. ...|..+|.||.|+.+++|.|.+||+|.. |+...|.+ +|.| |+|++++.|.|.+||
T Consensus 379 ~~C~~~~~g~~c~-~~~C~~~C~nG~C~~~~~C~C~~G~~G~~-C~~~~C~~---~C~~~g~C~~~~~C~C~~G~ 448 (463)
T 2wg3_C 379 EECRATVQPAQTL-TSECSRLCRNGYCTPTGKCCCSPGWEGDF-CRTAKCEP---ACRHGGVCVRPNKCLCKKGY 448 (463)
T ss_dssp GGGCCCCCCCCCC-CCHHHHHCCSEEECTTSCEEECTTEESTT-SCEECC-------------------------
T ss_pred ccCCCCCcCCCCc-cccccCCCCCCccCCCCeECCCCCcCCCc-CCcCcCCC---CCCCCCEECCCCEEECCCCc
Confidence 6788999887543 56677779999999999999999999997 77555554 6775 799999999999998
No 6
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.59 E-value=5.8e-08 Score=68.19 Aligned_cols=74 Identities=28% Similarity=0.684 Sum_probs=53.7
Q ss_pred CCceEeCCCceeCCCc-----------e--ecccC-CCCCC-cEEc----------CCCeEEccCCceeccCC--CCCcc
Q psy8484 56 THVRICCEGYEDDHGS-----------C--RPVCE-RECVF-GSCT----------SPNQCTCSPGYVVINEA--SPNIC 108 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~-----------C--~~~C~-~~C~n-G~C~----------~p~~C~C~~G~~G~~~c--~~~~C 108 (132)
.+.|.|.+||+|.... | ...|. .+|.| |.|+ ....|.|++||.|.. | +.+.|
T Consensus 22 ~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~-C~~~i~~C 100 (143)
T 4d90_A 22 SFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIH-CQHNINEC 100 (143)
T ss_dssp CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTT-SCEECCTT
T ss_pred CEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCC-cccCCCcC
Confidence 4679999999987421 0 12343 46886 8998 245899999999987 5 44566
Q ss_pred ccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484 109 EPHCAECVN-GVCSAP---NTCDCLDVL 132 (132)
Q Consensus 109 ~~~C~~C~n-G~C~~p---~~C~C~~G~ 132 (132)
... +|.+ |.|++. +.|.|++||
T Consensus 101 ~~~--~C~~~~~C~~~~g~~~C~C~~G~ 126 (143)
T 4d90_A 101 EVE--PCKNGGICTDLVANYSCECPGEF 126 (143)
T ss_dssp TTC--CSCTTCEEEEETTEEEEECCTTC
T ss_pred CCC--CCCCCCEeECCCCCeEeECCCCC
Confidence 544 7885 799863 489999998
No 7
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.48 E-value=2.1e-07 Score=65.34 Aligned_cols=74 Identities=24% Similarity=0.641 Sum_probs=53.6
Q ss_pred CCceEeCCCceeCCCce-ecccC-CCCCC-cEEcCC---CeEEccCCceeccCCC--CCccccCCCCCCC-CEEcCC---
Q psy8484 56 THVRICCEGYEDDHGSC-RPVCE-RECVF-GSCTSP---NQCTCSPGYVVINEAS--PNICEPHCAECVN-GVCSAP--- 123 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C-~~~C~-~~C~n-G~C~~p---~~C~C~~G~~G~~~c~--~~~C~~~C~~C~n-G~C~~p--- 123 (132)
.+.|.|.+||+|....- +..|. .+|.+ |+|+.. ..|.|++||.|.. |+ .+.|... +|.+ |+|++.
T Consensus 27 ~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~-C~~~~~~C~~~--~C~~~g~C~~~~g~ 103 (135)
T 2vj3_A 27 SFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVH-CEVNTDECASS--PCLHNGRCLDKINE 103 (135)
T ss_dssp SEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSS-SCEECCTTTTC--CSTTTCEEEECSSC
T ss_pred CEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCc-ceecCCcccCC--CcCCCCEeECCCCC
Confidence 35799999999874321 23353 47885 899853 4899999999987 53 3455544 7875 899863
Q ss_pred CceeCCCCC
Q psy8484 124 NTCDCLDVL 132 (132)
Q Consensus 124 ~~C~C~~G~ 132 (132)
+.|.|++||
T Consensus 104 ~~C~C~~G~ 112 (135)
T 2vj3_A 104 FQCECPTGF 112 (135)
T ss_dssp EEEECCTTE
T ss_pred eEEECCCCC
Confidence 589999997
No 8
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.46 E-value=1.9e-07 Score=71.38 Aligned_cols=73 Identities=25% Similarity=0.603 Sum_probs=54.5
Q ss_pred CceEeCCCceeCCCceec----------ccC-----CCCC-CcEEcCCCeEEccCC------ceeccCCC--CCccccCC
Q psy8484 57 HVRICCEGYEDDHGSCRP----------VCE-----RECV-FGSCTSPNQCTCSPG------YVVINEAS--PNICEPHC 112 (132)
Q Consensus 57 ~~c~C~~Gy~~~~~~C~~----------~C~-----~~C~-nG~C~~p~~C~C~~G------~~G~~~c~--~~~C~~~C 112 (132)
..|.|.+||+|...+|.. .|. .+|. +|.|+. ++|.|.+| |.|.. |+ ...|...-
T Consensus 107 g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G~~-Ce~~~~~C~~~~ 184 (217)
T 2p28_B 107 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQY-CECDTINCERYN 184 (217)
T ss_dssp TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEESTT-SCEESSCSCEET
T ss_pred CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEECCC-cccCCccCCCCC
Confidence 679999999999766531 354 4677 599995 89999999 58887 54 45565441
Q ss_pred C-CCC-C--CEEcCCCceeCCCCC
Q psy8484 113 A-ECV-N--GVCSAPNTCDCLDVL 132 (132)
Q Consensus 113 ~-~C~-n--G~C~~p~~C~C~~G~ 132 (132)
. .|. | |+|+. ++|.|.+||
T Consensus 185 g~~C~~~~~G~C~~-g~C~C~~G~ 207 (217)
T 2p28_B 185 GQVCGGPGRGLCFC-GKCRCHPGF 207 (217)
T ss_dssp TEETTCTTTEEEET-TEEEECTTE
T ss_pred CCCCCCCCCcEEeC-CeeECCCCC
Confidence 1 365 5 99986 899999998
No 9
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.46 E-value=1.3e-07 Score=78.43 Aligned_cols=71 Identities=27% Similarity=0.769 Sum_probs=53.1
Q ss_pred ceEeCCCceeCCCceecccCCCCCC-cEEcC-CCeEEccCCceeccCCCC----C----ccccCCC---CCCC-CEEcC-
Q psy8484 58 VRICCEGYEDDHGSCRPVCERECVF-GSCTS-PNQCTCSPGYVVINEASP----N----ICEPHCA---ECVN-GVCSA- 122 (132)
Q Consensus 58 ~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~-p~~C~C~~G~~G~~~c~~----~----~C~~~C~---~C~n-G~C~~- 122 (132)
.|.|.+||.|. .|...|. +|.| |+|.. .++|.|++||.|.. |+. . .|...|. .|.+ |.|..
T Consensus 186 ~c~C~~g~~G~--~C~~~C~-~C~~~G~C~~~~g~C~C~~G~~G~~-Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~ 261 (423)
T 2gy5_A 186 VRRCEAQKWGP--ECNHLCT-ACMNNGVCHEDTGECICPPGFMGRT-CEKACELHTFGRTCKERCSGQEGCKSYVFCLPD 261 (423)
T ss_dssp ECSSCTTEEST--TSCEECC-CCCTTCEECTTTCCEECCTTEESTT-SCEECCTTEESTTSCEECCSTTTTTTCCEEETT
T ss_pred CCcCCCCCCCC--CCCCCCC-CCCCCCEEECCCCcEeCCCCccCCC-cccccCCCCCCCCcCccCCCCCCCCCCCEECCC
Confidence 47899999986 4555664 7885 99986 78999999999997 542 1 2333343 5775 78875
Q ss_pred CCceeCCCCC
Q psy8484 123 PNTCDCLDVL 132 (132)
Q Consensus 123 p~~C~C~~G~ 132 (132)
.++|.|.+||
T Consensus 262 ~~~C~C~~G~ 271 (423)
T 2gy5_A 262 PYGCSCATGW 271 (423)
T ss_dssp TTEEECCBTC
T ss_pred CCeEEeCCCc
Confidence 6899999998
No 10
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.37 E-value=5.7e-07 Score=78.85 Aligned_cols=74 Identities=19% Similarity=0.533 Sum_probs=56.2
Q ss_pred CCceEeC----CCceeCCCce-ecccC----CCCC-CcEEcCCCeEEccCCceeccCCC----CCccccCC-CCCC-CCE
Q psy8484 56 THVRICC----EGYEDDHGSC-RPVCE----RECV-FGSCTSPNQCTCSPGYVVINEAS----PNICEPHC-AECV-NGV 119 (132)
Q Consensus 56 ~~~c~C~----~Gy~~~~~~C-~~~C~----~~C~-nG~C~~p~~C~C~~G~~G~~~c~----~~~C~~~C-~~C~-nG~ 119 (132)
.+.|.|. +||.|..+++ ...|. .+|. ||.|+. +.|.|.+||.|.. |+ ...|...= ..|. +|.
T Consensus 503 ~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~-CeC~~~~~~C~~~~g~~C~~~G~ 580 (690)
T 3fcs_B 503 CGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYY-CNCTTRTDTCMSSNGLLCSGRGK 580 (690)
T ss_dssp SSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSS-SCEECCCTTTBCTTSSBTSSSCE
T ss_pred CCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCC-CccCCCCCcccCCCCCCCCCCCE
Confidence 3578999 9999987654 44565 3688 599987 9999999999997 65 45565310 1576 589
Q ss_pred EcCCCceeC-CCCC
Q psy8484 120 CSAPNTCDC-LDVL 132 (132)
Q Consensus 120 C~~p~~C~C-~~G~ 132 (132)
|+. +.|.| .+||
T Consensus 581 C~~-g~C~C~~~Gy 593 (690)
T 3fcs_B 581 CEC-GSCVCIQPGS 593 (690)
T ss_dssp EET-TEEECCSTTC
T ss_pred EeC-CEEECCCCCc
Confidence 986 89999 8998
No 11
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.35 E-value=5.4e-07 Score=74.76 Aligned_cols=77 Identities=26% Similarity=0.647 Sum_probs=56.3
Q ss_pred CCceEeCCCceeCCCc--ee---------cccC--CCCCC-cEEc-CCCeEEccCCceecc---CCCCCccccCCC---C
Q psy8484 56 THVRICCEGYEDDHGS--CR---------PVCE--RECVF-GSCT-SPNQCTCSPGYVVIN---EASPNICEPHCA---E 114 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~--C~---------~~C~--~~C~n-G~C~-~p~~C~C~~G~~G~~---~c~~~~C~~~C~---~ 114 (132)
.+.|.|.+||+|...+ |. ..|. .+|.+ |.|. ..++|.|.+||.|.+ .|.++..++.|. +
T Consensus 215 ~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~ 294 (423)
T 2gy5_A 215 TGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCS 294 (423)
T ss_dssp TCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCC
T ss_pred CCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCccccccc
Confidence 5789999999998542 22 2332 35665 7886 468999999999987 255554555665 6
Q ss_pred CCC-CEEcCCCceeCCCCC
Q psy8484 115 CVN-GVCSAPNTCDCLDVL 132 (132)
Q Consensus 115 C~n-G~C~~p~~C~C~~G~ 132 (132)
|.| |.|++.+.|.|++||
T Consensus 295 C~ngg~C~~~~~C~C~~G~ 313 (423)
T 2gy5_A 295 CNNGEMCDRFQGCLCSPGW 313 (423)
T ss_dssp CTTCCEEETTTEEECCTTC
T ss_pred CCCCCEecCCCceECCCCC
Confidence 775 799987779999998
No 12
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.34 E-value=3.8e-07 Score=79.97 Aligned_cols=75 Identities=25% Similarity=0.502 Sum_probs=55.6
Q ss_pred CCceEeCCCceeCCCcee---------cccCC-----CCC-CcEEcCCCeEEcc----CCceecc-CCCCCccccCCC-C
Q psy8484 56 THVRICCEGYEDDHGSCR---------PVCER-----ECV-FGSCTSPNQCTCS----PGYVVIN-EASPNICEPHCA-E 114 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C~---------~~C~~-----~C~-nG~C~~p~~C~C~----~G~~G~~-~c~~~~C~~~C~-~ 114 (132)
.+.|.|.+||.|..+++. ..|.. +|. ||.|+ .+.|.|. +||.|.. +++...|...-. .
T Consensus 457 ~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~ 535 (690)
T 3fcs_B 457 CGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL-CGQCVCHSSDFGKITGKYCECDDFSCVRYKGEM 535 (690)
T ss_dssp TTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC-SSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSB
T ss_pred CCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE-CCeeEeecCCCCCeeCCCcCcccCcCcCCCCCC
Confidence 345899999999876542 23653 488 59998 5999999 9999998 224556764311 5
Q ss_pred CC-CCEEcCCCceeCCCCC
Q psy8484 115 CV-NGVCSAPNTCDCLDVL 132 (132)
Q Consensus 115 C~-nG~C~~p~~C~C~~G~ 132 (132)
|. +|.|+. +.|.|.+||
T Consensus 536 C~~~G~C~~-g~C~C~~Gy 553 (690)
T 3fcs_B 536 CSGHGQCSC-GDCLCDSDW 553 (690)
T ss_dssp GGGSEEEET-TEEEECTTE
T ss_pred CCCCCEecC-CeeECcCCC
Confidence 66 689987 999999997
No 13
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.32 E-value=4.3e-07 Score=66.68 Aligned_cols=76 Identities=30% Similarity=0.740 Sum_probs=53.7
Q ss_pred CCceEeCCCceeCCCce-ecccC-CCCC-CcEEc----CC---CeEEccCCceeccCCCCCcccc----CCC-CC-C-CC
Q psy8484 56 THVRICCEGYEDDHGSC-RPVCE-RECV-FGSCT----SP---NQCTCSPGYVVINEASPNICEP----HCA-EC-V-NG 118 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C-~~~C~-~~C~-nG~C~----~p---~~C~C~~G~~G~~~c~~~~C~~----~C~-~C-~-nG 118 (132)
.+.|.|.+||+|.+..| +..|. .+|. +|.|+ .. ..|.|++||.|.. .+...|.. .|. +| . +|
T Consensus 73 ~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~-~~~~~C~~~~~~~C~~~C~~~~~ 151 (186)
T 1z1y_A 73 MYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNP-EDEXXCTXTGETACQLXCNTDNE 151 (186)
T ss_dssp SEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEET-TTTTEEEEEECCCCCCCCCTTTE
T ss_pred CEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccC-CCCCcceEcCCCcccccccccCc
Confidence 45799999999987666 45564 4688 59998 43 4899999999942 12223331 233 67 5 57
Q ss_pred EEcC-C--CceeCCCCC
Q psy8484 119 VCSA-P--NTCDCLDVL 132 (132)
Q Consensus 119 ~C~~-p--~~C~C~~G~ 132 (132)
+|++ + ++|.|++||
T Consensus 152 ~C~n~~g~y~C~C~~G~ 168 (186)
T 1z1y_A 152 VCXNVEGVYXCQCMEGF 168 (186)
T ss_dssp EEEEETTEEEEEECTTC
T ss_pred ceecCCCCeeeECCCCC
Confidence 9986 2 589999998
No 14
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.29 E-value=2.1e-07 Score=68.41 Aligned_cols=75 Identities=24% Similarity=0.639 Sum_probs=54.9
Q ss_pred CCceEeCCCceeC-CCcee--cccC-----CCCCC-cEEcCCC--------eEEccCCceecc-CCCCCccccCCCCCC-
Q psy8484 56 THVRICCEGYEDD-HGSCR--PVCE-----RECVF-GSCTSPN--------QCTCSPGYVVIN-EASPNICEPHCAECV- 116 (132)
Q Consensus 56 ~~~c~C~~Gy~~~-~~~C~--~~C~-----~~C~n-G~C~~p~--------~C~C~~G~~G~~-~c~~~~C~~~C~~C~- 116 (132)
.+.|.|.+||+|. ...|+ ..|. .+|.| |+|+... .|.|.+||.|.. .|.++.|... +|.
T Consensus 24 ~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~--~C~~ 101 (186)
T 1z1y_A 24 HFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYX--NCGE 101 (186)
T ss_dssp CEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTC--CCCT
T ss_pred CeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCC--CCCC
Confidence 4679999999986 34564 3464 46875 8998543 799999999985 3444556544 788
Q ss_pred CCEEc----CC---CceeCCCCC
Q psy8484 117 NGVCS----AP---NTCDCLDVL 132 (132)
Q Consensus 117 nG~C~----~p---~~C~C~~G~ 132 (132)
+|.|+ +. +.|.|++||
T Consensus 102 ~g~C~~~~~~~~g~~~C~C~~Gy 124 (186)
T 1z1y_A 102 SGECIVEYLSEIQSAGCSCAIGX 124 (186)
T ss_dssp TEEEEEEEETTEEEEEEEECTEE
T ss_pred CCEEeeCCcCCCCCceEECCCCC
Confidence 58998 53 599999987
No 15
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.25 E-value=7.4e-07 Score=78.14 Aligned_cols=74 Identities=24% Similarity=0.582 Sum_probs=53.4
Q ss_pred CCceEeCCCceeCCCceec----------ccCC-----CCC-CcEEcCCCeEEcc------CCceeccCCC--CCccccC
Q psy8484 56 THVRICCEGYEDDHGSCRP----------VCER-----ECV-FGSCTSPNQCTCS------PGYVVINEAS--PNICEPH 111 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C~~----------~C~~-----~C~-nG~C~~p~~C~C~------~G~~G~~~c~--~~~C~~~ 111 (132)
.+.|.|.+||.|..++|.. .|.. +|. ||.|+ .++|.|. +||.|.. |+ ...|...
T Consensus 445 ~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~G~C~C~~~~~~~~G~~G~~-Ce~~~~~C~~~ 522 (687)
T 3k6s_B 445 CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKLIYGQY-CECDTINCERY 522 (687)
T ss_dssp SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE-TTEEEECCCCSTTCCEESTT-SCEESSCSCEE
T ss_pred CCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe-CCEEEcCCCCCCCCCccccc-cccccccccCC
Confidence 4679999999999766522 3643 387 49999 5899999 9999997 54 4556532
Q ss_pred CC-CCC---CCEEcCCCceeCCCCC
Q psy8484 112 CA-ECV---NGVCSAPNTCDCLDVL 132 (132)
Q Consensus 112 C~-~C~---nG~C~~p~~C~C~~G~ 132 (132)
=. .|. +|.|+. ++|.|.+||
T Consensus 523 ~~~~C~~~~~G~C~~-g~C~C~~G~ 546 (687)
T 3k6s_B 523 NGQVCGGPGRGLCFC-GKCRCHPGF 546 (687)
T ss_dssp TTEETSHHHHEEEET-TEEEECTTC
T ss_pred CCcCcCCCCCCeEEC-CEEEcCCCC
Confidence 00 354 578874 788888887
No 16
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=98.17 E-value=9.4e-07 Score=66.38 Aligned_cols=33 Identities=24% Similarity=0.710 Sum_probs=29.7
Q ss_pred ce-ecccCCCCCC-cEEcCCCeEEccCCceeccCCC
Q psy8484 71 SC-RPVCERECVF-GSCTSPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 71 ~C-~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~ 104 (132)
.| .|+|.++|.| |.|++|++|+|++||.|.. |+
T Consensus 145 ~C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~-C~ 179 (188)
T 2ygo_A 145 TCQQAECPGGCRNGGFCNERRICECPDGFHGPH-CE 179 (188)
T ss_dssp EECCCCCTTCCCTTCEECTTSCEECCTTCBTTT-TC
T ss_pred cccCCccCCCCCCCCEeCCCCcccCcCCCCCCC-Cc
Confidence 56 7899999997 8999999999999999987 54
No 17
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.14 E-value=1.8e-06 Score=75.77 Aligned_cols=73 Identities=27% Similarity=0.616 Sum_probs=54.4
Q ss_pred CceEeC------CCceeCCCce-ecccCC----CCC---CcEEcCCCeEEccCCceeccCCC----CCccccCCC-CCC-
Q psy8484 57 HVRICC------EGYEDDHGSC-RPVCER----ECV---FGSCTSPNQCTCSPGYVVINEAS----PNICEPHCA-ECV- 116 (132)
Q Consensus 57 ~~c~C~------~Gy~~~~~~C-~~~C~~----~C~---nG~C~~p~~C~C~~G~~G~~~c~----~~~C~~~C~-~C~- 116 (132)
..|.|. +||.|..+++ ...|.. .|. ||.|+. ++|.|.+||.|.. |+ ...|...=. .|.
T Consensus 493 G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-g~C~C~~G~~G~~-Cec~~~~~~C~~~~g~~Cs~ 570 (687)
T 3k6s_B 493 GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSA-CQCERTTEGCLNPRRVECSG 570 (687)
T ss_dssp TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET-TEEEECTTCCSTT-SCSCCSSCTTBCTTCSBTSS
T ss_pred CEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC-CEEEcCCCCcCCC-CccCCCCCCCCCCCCCCCCC
Confidence 478999 9999987665 445652 476 589985 8999999999997 55 345544201 466
Q ss_pred CCEEcCCCceeCCCCC
Q psy8484 117 NGVCSAPNTCDCLDVL 132 (132)
Q Consensus 117 nG~C~~p~~C~C~~G~ 132 (132)
+|.|+. ++|.|.+||
T Consensus 571 ~G~C~~-g~C~C~~Gy 585 (687)
T 3k6s_B 571 RGRCRC-NVCECHSGY 585 (687)
T ss_dssp SCCBCS-SCBCCSTTC
T ss_pred CCcCCC-CEEECCCCC
Confidence 589987 899999998
No 18
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.12 E-value=1.1e-06 Score=58.23 Aligned_cols=68 Identities=19% Similarity=0.410 Sum_probs=46.1
Q ss_pred CceEeCCCceeCCCceeccc-CCCCCCcEEcCCCeEEccCCceeccCCC---CCccccCCCCCCC-CEEcC-----CCce
Q psy8484 57 HVRICCEGYEDDHGSCRPVC-ERECVFGSCTSPNQCTCSPGYVVINEAS---PNICEPHCAECVN-GVCSA-----PNTC 126 (132)
Q Consensus 57 ~~c~C~~Gy~~~~~~C~~~C-~~~C~nG~C~~p~~C~C~~G~~G~~~c~---~~~C~~~C~~C~n-G~C~~-----p~~C 126 (132)
+.|.|.+||+|.... +..| ..+|.|+ .....|.|++||. . |+ .+.|.+. +|.| |+|++ .+.|
T Consensus 2 y~C~C~~g~~g~~c~-~~~c~~~pC~n~--~~~y~C~C~~G~~--~-C~~~~~~~C~~~--pC~ngg~C~~~~~~~~~~C 73 (91)
T 1tpg_A 2 YQVICRDEKTQMIYQ-QHQSWLRPVLRS--NRVEYCWCNSGRA--Q-CHSVPVKSCSEP--RCFNGGTCQQALYFSDFVC 73 (91)
T ss_dssp CCCCCBCSSSCCBCC-SSCEEEEECSSS--SCEEEEECSSSCC--B-CCEECEEECSSC--CSCTTCEEEEESSSSCEEE
T ss_pred eeeECCCCCcCCeEC-CCcccCCccccC--CCCcEeECCCCCc--c-cccCcCCcccCC--CCCCCCEeecCCCCCCeEe
Confidence 568999999986321 2222 2356654 2345799999997 3 53 3556554 8987 79984 3589
Q ss_pred eCCCCC
Q psy8484 127 DCLDVL 132 (132)
Q Consensus 127 ~C~~G~ 132 (132)
.|++||
T Consensus 74 ~C~~G~ 79 (91)
T 1tpg_A 74 QCPEGF 79 (91)
T ss_dssp ECCTTC
T ss_pred ECCCCC
Confidence 999998
No 19
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.09 E-value=1.1e-06 Score=60.54 Aligned_cols=74 Identities=26% Similarity=0.659 Sum_probs=49.1
Q ss_pred CCceEeCCCceeCCC---ceecccC-CCCCCcEEcC--CCeEEccCCce---eccCCCCCccccCCCCCCCCEEcC---C
Q psy8484 56 THVRICCEGYEDDHG---SCRPVCE-RECVFGSCTS--PNQCTCSPGYV---VINEASPNICEPHCAECVNGVCSA---P 123 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~---~C~~~C~-~~C~nG~C~~--p~~C~C~~G~~---G~~~c~~~~C~~~C~~C~nG~C~~---p 123 (132)
.+.|.|.+||+|... .|+..|. .+|. +.|+. ...|.|++||. |...-+++.|... .+| +++|++ .
T Consensus 23 ~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy~~~~g~~C~dideC~~~-~~C-~~~C~n~~g~ 99 (118)
T 1dx5_I 23 SYLCVCAEGFAPIPHEPHRCQMFCNQTACP-ADCDPNTQASCECPEGYILDDGFICTDIDECENG-GFC-SGVCHNLPGT 99 (118)
T ss_dssp CEEEECCTTEEEETTEEEEEEECCCSSEEE-CEECTTSTTCEECCTTEEEETTTEEEECCHHHHC-SSC-SSEEEECSSS
T ss_pred CEEeECCCCccccCCCCCccccccCCCCCC-CcccCCCCeEeECCCCccCCCCCccccccccCCC-CCC-cCeEEeCCCC
Confidence 467999999999742 4543332 1222 45654 46899999999 4431134566651 278 789986 3
Q ss_pred CceeCCCCC
Q psy8484 124 NTCDCLDVL 132 (132)
Q Consensus 124 ~~C~C~~G~ 132 (132)
+.|.|++||
T Consensus 100 y~C~C~~G~ 108 (118)
T 1dx5_I 100 FECICGPDS 108 (118)
T ss_dssp EEEEECSSS
T ss_pred EEEECCCCC
Confidence 699999998
No 20
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.09 E-value=5.5e-06 Score=58.26 Aligned_cols=77 Identities=23% Similarity=0.599 Sum_probs=53.1
Q ss_pred CCceEeCCCceeC-------CCcee--cccCC----CCCC-cEEcC---CCeEEccCCceecc-----------CC-CCC
Q psy8484 56 THVRICCEGYEDD-------HGSCR--PVCER----ECVF-GSCTS---PNQCTCSPGYVVIN-----------EA-SPN 106 (132)
Q Consensus 56 ~~~c~C~~Gy~~~-------~~~C~--~~C~~----~C~n-G~C~~---p~~C~C~~G~~G~~-----------~c-~~~ 106 (132)
.+.|.|.+||+|. +..|+ ..|.. +|.+ +.|+. ...|.|++||.|.. .| +++
T Consensus 18 ~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~did 97 (143)
T 2bou_A 18 ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVD 97 (143)
T ss_dssp SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECC
T ss_pred CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCcc
Confidence 4689999999984 24563 34643 6884 89974 35799999999973 12 334
Q ss_pred ccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484 107 ICEPHCAECVN-GVCSAP---NTCDCLDVL 132 (132)
Q Consensus 107 ~C~~~C~~C~n-G~C~~p---~~C~C~~G~ 132 (132)
.|...=.+|.+ +.|++. +.|.|++||
T Consensus 98 eC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy 127 (143)
T 2bou_A 98 ECSSGQHQCDSSTVCFNTVGSYSCRCRPGW 127 (143)
T ss_dssp HHHHTCCCCCTTSEEEECSSCEEEECCSSS
T ss_pred CccCcCCCCCCCCEEECCCCCEEeeCCCCc
Confidence 55431016775 799873 589999998
No 21
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.99 E-value=2.6e-06 Score=71.19 Aligned_cols=52 Identities=33% Similarity=0.731 Sum_probs=18.7
Q ss_pred eeecCCCceEeCCCceeCCCceecccCCCCCC-cEEcCCCeEEccCCceeccCCC
Q psy8484 51 EYMEDTHVRICCEGYEDDHGSCRPVCERECVF-GSCTSPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 51 ~~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~p~~C~C~~G~~G~~~c~ 104 (132)
+.+.....|.|.+||+|..++ ++.|..+|.| |+|+.+++|.|.+||.|.. |+
T Consensus 402 G~C~~~~~C~C~~G~~G~~C~-~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~-C~ 454 (463)
T 2wg3_C 402 GYCTPTGKCCCSPGWEGDFCR-TAKCEPACRHGGVCVRPNKCLCKKGYLGPQ-CE 454 (463)
T ss_dssp EEECTTSCEEECTTEESTTSC-EECC-----------------------------
T ss_pred CccCCCCeECCCCCcCCCcCC-cCcCCCCCCCCCEECCCCEEECCCCcccCC-CC
Confidence 345555789999999998543 6788889997 8999999999999999987 54
No 22
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.78 E-value=2.3e-05 Score=54.67 Aligned_cols=52 Identities=31% Similarity=0.771 Sum_probs=37.9
Q ss_pred CCCCC-cEEcC-----CCeEEccCCceeccCCCC--------------CccccCCCCCCC-CEEc-------C---CCce
Q psy8484 78 RECVF-GSCTS-----PNQCTCSPGYVVINEASP--------------NICEPHCAECVN-GVCS-------A---PNTC 126 (132)
Q Consensus 78 ~~C~n-G~C~~-----p~~C~C~~G~~G~~~c~~--------------~~C~~~C~~C~n-G~C~-------~---p~~C 126 (132)
.+|.| |+|+. ...|.|++||+|.. |+. +.|.+. +|.| |.|+ + .++|
T Consensus 6 ~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~-C~~~~~~~~~~~~c~~~~~C~~~--~C~~~g~C~~~~~~~~~~~~~~~C 82 (143)
T 4d90_A 6 NPCENGGICLPGLADGSFSCECPDGFTDPN-CSSVVEVASDEEEPTSAGPCTPN--PCHNGGTCEISEAYRGDTFIGYVC 82 (143)
T ss_dssp CCCGGGCEEEC-----CCEEECCTTCCTTT-TCSCCCCTTTTTSCCCCCTTSSC--CCCTTCEEEECCCEETTEECCEEE
T ss_pred CcCCCCCEeeCCCCCCCEEeECCCCCCCCC-CccCccccccccccccCCcCCCC--CCCCCCEecCCCccccCCCCCeEe
Confidence 47885 89984 35899999999986 432 234333 6876 7998 2 4689
Q ss_pred eCCCCC
Q psy8484 127 DCLDVL 132 (132)
Q Consensus 127 ~C~~G~ 132 (132)
.|++||
T Consensus 83 ~C~~G~ 88 (143)
T 4d90_A 83 KCPRGF 88 (143)
T ss_dssp ECCTTE
T ss_pred ECcCCC
Confidence 999997
No 23
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.75 E-value=1.5e-05 Score=51.38 Aligned_cols=53 Identities=26% Similarity=0.710 Sum_probs=36.4
Q ss_pred CCCCCcEEcC---CCeEEccCCce--eccCCCCCccc-cCCCCCCCCEEcCC---CceeCCCCC
Q psy8484 78 RECVFGSCTS---PNQCTCSPGYV--VINEASPNICE-PHCAECVNGVCSAP---NTCDCLDVL 132 (132)
Q Consensus 78 ~~C~nG~C~~---p~~C~C~~G~~--G~~~c~~~~C~-~~C~~C~nG~C~~p---~~C~C~~G~ 132 (132)
.+|.||.|+. ...|.|++||. |...-+++.|. +. +|.||+|++. +.|.|++||
T Consensus 12 ~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~--~C~~~~C~n~~g~y~C~C~~G~ 73 (82)
T 1emn_A 12 DVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGN--PCGNGTCKNVIGGFECTCEEGF 73 (82)
T ss_dssp TSCSSSEECCCSSCCCEECCTTEEEETTEEEECCGGGTCC--TTSSSCEEECSSSEEECCSSSS
T ss_pred CCcCCCEEEecCCCEEEECCCCeECCCCccCCcccccCCC--CCCCCEeECCCCCEEeECCCCe
Confidence 4677788874 35799999997 44311345565 22 7778888862 589998887
No 24
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.71 E-value=2.7e-05 Score=54.67 Aligned_cols=57 Identities=26% Similarity=0.631 Sum_probs=41.4
Q ss_pred cCCCCC-CcEEcCCCeEEccCCceec--------cCC-CCCccccCCC-CCC-CCEEcCC---CceeCCCCC
Q psy8484 76 CERECV-FGSCTSPNQCTCSPGYVVI--------NEA-SPNICEPHCA-ECV-NGVCSAP---NTCDCLDVL 132 (132)
Q Consensus 76 C~~~C~-nG~C~~p~~C~C~~G~~G~--------~~c-~~~~C~~~C~-~C~-nG~C~~p---~~C~C~~G~ 132 (132)
|..+|. ||+|+....|.|++||.|. ..| +++.|...=. +|. ++.|++. ++|.|++||
T Consensus 5 C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy 76 (143)
T 2bou_A 5 CARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGY 76 (143)
T ss_dssp CCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTE
T ss_pred CcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCc
Confidence 566788 5999998999999999994 124 4556654311 576 4799862 589999997
No 25
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.61 E-value=4.7e-05 Score=53.14 Aligned_cols=52 Identities=27% Similarity=0.672 Sum_probs=39.6
Q ss_pred CCCCC-cEEcCC---CeEEccCCceeccCCC--CCccccCCCCCCC-CEEcCC---CceeCCCCC
Q psy8484 78 RECVF-GSCTSP---NQCTCSPGYVVINEAS--PNICEPHCAECVN-GVCSAP---NTCDCLDVL 132 (132)
Q Consensus 78 ~~C~n-G~C~~p---~~C~C~~G~~G~~~c~--~~~C~~~C~~C~n-G~C~~p---~~C~C~~G~ 132 (132)
.+|.| |+|+.. ..|.|++||.|.. |+ .+.|... +|.+ |+|++. ++|.|++||
T Consensus 13 ~~C~~~g~C~~~~g~~~C~C~~Gy~G~~-C~~~~~~C~~~--~C~~~~~C~~~~g~~~C~C~~G~ 74 (135)
T 2vj3_A 13 NPCEHAGKCINTLGSFECQCLQGYTGPR-CEIDVNECVSN--PCQNDATCLDQIGEFQCICMPGY 74 (135)
T ss_dssp CSSSTTCEEEECSSSEEEECCTTEESTT-SCEECCTTTTC--CCCSSCEEEECSSCEEEECCTTE
T ss_pred CCCCCCCEeECCCCCEEEECCCCCcCCc-ccccCccCCCC--CCCCCCEEeCCCCCceeeCCCCC
Confidence 57885 899753 3899999999986 53 4556544 7875 799863 589999997
No 26
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.54 E-value=6e-05 Score=57.45 Aligned_cols=52 Identities=27% Similarity=0.567 Sum_probs=38.2
Q ss_pred CCC-CcEEcCCCeEEccCCceecc-CCCCC---------ccccCCC--CCC-CCEEcCCCceeCCCCC
Q psy8484 79 ECV-FGSCTSPNQCTCSPGYVVIN-EASPN---------ICEPHCA--ECV-NGVCSAPNTCDCLDVL 132 (132)
Q Consensus 79 ~C~-nG~C~~p~~C~C~~G~~G~~-~c~~~---------~C~~~C~--~C~-nG~C~~p~~C~C~~G~ 132 (132)
.|. ||.|+. +.|.|++||.|.. +|+.. .|..... .|. +|+|+. ++|.|.+||
T Consensus 97 ~Csg~G~C~~-g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw 162 (217)
T 2p28_B 97 LCHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSD 162 (217)
T ss_dssp TTTTSEEEET-TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCC
T ss_pred ccCCCceEEC-CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCC
Confidence 566 699996 9999999999998 22221 3543322 576 589985 899999995
No 27
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.25 E-value=0.00023 Score=61.94 Aligned_cols=75 Identities=21% Similarity=0.551 Sum_probs=51.7
Q ss_pred Cce-EeCCCceeCCCcee--cccC-CC--CCC-c---EEcC---CCeEE-ccCCceeccCCC----------------CC
Q psy8484 57 HVR-ICCEGYEDDHGSCR--PVCE-RE--CVF-G---SCTS---PNQCT-CSPGYVVINEAS----------------PN 106 (132)
Q Consensus 57 ~~c-~C~~Gy~~~~~~C~--~~C~-~~--C~n-G---~C~~---p~~C~-C~~G~~G~~~c~----------------~~ 106 (132)
+.| .|.+||+|.+..|+ -.|. .+ |.+ + +|+. ..+|. |++||.|.. |. ..
T Consensus 25 y~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~-c~g~g~~~~~~dg~~C~did 103 (634)
T 1yo8_A 25 WSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQ-PVGVGLEAAKTEKQVCEPEN 103 (634)
T ss_dssp EEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECC-CEESSSHHHHSCCCCEEECC
T ss_pred eECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCc-cccccccccccCCCcccccc
Confidence 579 89999998666674 3464 24 886 6 7974 35798 999999975 22 23
Q ss_pred ccccCCCCCCC-CEEcC-C------CceeCCCCC
Q psy8484 107 ICEPHCAECVN-GVCSA-P------NTCDCLDVL 132 (132)
Q Consensus 107 ~C~~~C~~C~n-G~C~~-p------~~C~C~~G~ 132 (132)
.|...=.+|.+ ++|++ + +.|.|++||
T Consensus 104 eC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy 137 (634)
T 1yo8_A 104 PCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGY 137 (634)
T ss_dssp TTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTE
T ss_pred cccCCCcccccCccccccccccccceeeeccCCc
Confidence 44321016874 79985 2 489999997
No 28
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.18 E-value=7.8e-05 Score=48.29 Aligned_cols=54 Identities=26% Similarity=0.599 Sum_probs=33.8
Q ss_pred CCCCcEEcC---CCeEEccCCceecc----CC-CCCccccCCCCCCCCEEcC-C--CceeCCCCC
Q psy8484 79 ECVFGSCTS---PNQCTCSPGYVVIN----EA-SPNICEPHCAECVNGVCSA-P--NTCDCLDVL 132 (132)
Q Consensus 79 ~C~nG~C~~---p~~C~C~~G~~G~~----~c-~~~~C~~~C~~C~nG~C~~-p--~~C~C~~G~ 132 (132)
+|.||.|+. ...|.|++||.+.. .| ++++|...=..|.+|+|++ + +.|.|++||
T Consensus 12 ~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~ 76 (86)
T 1lmj_A 12 LCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGH 76 (86)
T ss_dssp TTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTS
T ss_pred CCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCc
Confidence 377778864 34788999998431 12 3445543300366788886 2 589998887
No 29
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.14 E-value=0.00033 Score=54.69 Aligned_cols=53 Identities=38% Similarity=0.877 Sum_probs=29.7
Q ss_pred CCCCC-cEEcC---CCeEEccCCceeccCC--CCCccccCC-CCCCCCEEcC---CCceeCCCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCSPGYVVINEA--SPNICEPHC-AECVNGVCSA---PNTCDCLDVL 132 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c--~~~~C~~~C-~~C~nG~C~~---p~~C~C~~G~ 132 (132)
.+|.| |.|+. ...|.|.+||.|.. | +.++|...= .+|.| .|++ .+.|.|++||
T Consensus 11 ~pC~~~g~C~~~~~~~~C~C~~g~~g~~-C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 11 QPCLHNGSCQDSIWGYTCTCSPGYEGSN-CELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGY 73 (317)
T ss_dssp CCCTTTCCCCCCSSSCCCCCSSSCCSSS-SCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTE
T ss_pred CCCCCCCEeECCCCCeEEECCCCCcCCc-cccCcccCCCCCCCCCcC-ccccCCCeeEEeccccc
Confidence 35664 66653 24577777777765 4 344554410 15655 6665 2567777665
No 30
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.08 E-value=0.00042 Score=47.02 Aligned_cols=31 Identities=26% Similarity=0.619 Sum_probs=13.3
Q ss_pred CeEEccCCceeccCCCCCccccCCC-CCCC-CEEc
Q psy8484 89 NQCTCSPGYVVINEASPNICEPHCA-ECVN-GVCS 121 (132)
Q Consensus 89 ~~C~C~~G~~G~~~c~~~~C~~~C~-~C~n-G~C~ 121 (132)
..|.|.+||.|.. +...|.+.-. +|.+ +.|+
T Consensus 75 y~C~C~~G~~~~~--~g~~C~~~~~~pC~~~~~~i 107 (114)
T 1aut_L 75 RRCSCAPGYKLGD--DLLQCHPAVKFPCGRPWKRM 107 (114)
T ss_dssp EEEECCTTEEECT--TSSCEEECSSSCTTCCC---
T ss_pred EEeECCCCeeECC--CCCccCcCcccCCCCCCccC
Confidence 3466666666653 3334444322 5543 3444
No 31
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.02 E-value=0.00046 Score=44.25 Aligned_cols=46 Identities=26% Similarity=0.525 Sum_probs=35.3
Q ss_pred CCceEeCCCceeCCCcee--cccC--CCCCCcEEcC---CCeEEccCCceecc
Q psy8484 56 THVRICCEGYEDDHGSCR--PVCE--RECVFGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C~--~~C~--~~C~nG~C~~---p~~C~C~~G~~G~~ 101 (132)
.+.|.|.+||++.+..|+ ..|. .+|.||+|+. ...|.|++||.|..
T Consensus 25 ~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 25 SYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CCCEECCTTEEEETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCS
T ss_pred CEEEECCCCeECCCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeCC
Confidence 568999999986655663 3453 5788899974 35799999999875
No 32
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.00 E-value=0.00047 Score=49.02 Aligned_cols=52 Identities=23% Similarity=0.643 Sum_probs=35.0
Q ss_pred CCCCC-cEEcC---CCeEEccCCceeccCCCC-CccccCCC-CCCCCEE-cC---CCceeCCCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCSPGYVVINEASP-NICEPHCA-ECVNGVC-SA---PNTCDCLDVL 132 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~-~~C~~~C~-~C~nG~C-~~---p~~C~C~~G~ 132 (132)
.+|.| |+|+. ...|.|++||.|.. |.. +.|... . +|.+ .| ++ .+.|.|++||
T Consensus 54 ~pC~n~g~C~~~~~~y~C~C~~G~~G~~-C~~~deC~~~-~~~C~~-~C~~n~~g~y~C~C~~Gy 115 (146)
T 1x7a_L 54 NPCLNGGLCKDDINSYECWCQVGFEGKN-CELDATCNIK-NGRCKQ-FCKTGADSKVLCSCTTGY 115 (146)
T ss_dssp CSSCTTCEEEECSSCEEEECCSSEESTT-TCEECCTTSG-GGSCSS-BCCCCSSSCCCCBCCTTE
T ss_pred CCCCCCCEeECCCCCEEEecCCCCcCCc-CCCCccccCC-CCCCcC-CCCCCCCCCEEeEcCCCc
Confidence 57886 89974 35799999999986 432 334321 1 4555 77 54 3689999987
No 33
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.00 E-value=0.00057 Score=44.81 Aligned_cols=44 Identities=25% Similarity=0.665 Sum_probs=32.8
Q ss_pred CCceEeCCCceeCCCcee----cccC-CCCCC-cEEc-----CCCeEEccCCceeccCCC
Q psy8484 56 THVRICCEGYEDDHGSCR----PVCE-RECVF-GSCT-----SPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C~----~~C~-~~C~n-G~C~-----~p~~C~C~~G~~G~~~c~ 104 (132)
.+.|.|.+||+ .|+ ..|. .+|.| |+|+ ....|.|++||.|.. |+
T Consensus 31 ~y~C~C~~G~~----~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~-Ce 85 (91)
T 1tpg_A 31 VEYCWCNSGRA----QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKS-CE 85 (91)
T ss_dssp EEEEECSSSCC----BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSS-CC
T ss_pred CcEeECCCCCc----ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCc-CC
Confidence 34699999997 342 3453 57997 8997 345799999999987 54
No 34
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.97 E-value=0.00037 Score=61.40 Aligned_cols=44 Identities=16% Similarity=0.310 Sum_probs=37.3
Q ss_pred eEeCCCceeCCCceecccCCCCC-CcEEcCCCeEEccCCceeccCCC
Q psy8484 59 RICCEGYEDDHGSCRPVCERECV-FGSCTSPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 59 c~C~~Gy~~~~~~C~~~C~~~C~-nG~C~~p~~C~C~~G~~G~~~c~ 104 (132)
..|.+||+|.+..-.+.|...|. ||+|+. ++|.|.+||.|.+ |+
T Consensus 520 ~~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~-C~ 564 (725)
T 2e26_A 520 FDKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLY-CD 564 (725)
T ss_dssp CCTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTT-SC
T ss_pred CccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCC-cC
Confidence 47999999985443488888898 899998 9999999999987 54
No 35
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=96.95 E-value=0.0003 Score=48.12 Aligned_cols=52 Identities=25% Similarity=0.830 Sum_probs=35.9
Q ss_pred CCCCCcEEcCC----CeEEccCCceeccCCCCCccccCCC--CCCCCEEcC--CCceeCCCCC
Q psy8484 78 RECVFGSCTSP----NQCTCSPGYVVINEASPNICEPHCA--ECVNGVCSA--PNTCDCLDVL 132 (132)
Q Consensus 78 ~~C~nG~C~~p----~~C~C~~G~~G~~~c~~~~C~~~C~--~C~nG~C~~--p~~C~C~~G~ 132 (132)
.+|.| +|+.. .+|.|++||.|.. .+.+.|...|. +|. +.|++ .+.|.|++||
T Consensus 10 ~pC~~-~C~~~~~g~y~C~C~~Gy~g~~-~~~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy 69 (118)
T 1dx5_I 10 ANCEY-QCQPLDQTSYLCVCAEGFAPIP-HEPHRCQMFCNQTACP-ADCDPNTQASCECPEGY 69 (118)
T ss_dssp CCCSS-EEEECSSSCEEEECCTTEEEET-TEEEEEEECCCSSEEE-CEECTTSTTCEECCTTE
T ss_pred CCCCC-CCCCCCCCCEEeECCCCccccC-CCCCccccccCCCCCC-CcccCCCCeEeECCCCc
Confidence 46765 78643 5799999999985 44455655443 333 56765 3699999997
No 36
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.84 E-value=0.00013 Score=43.40 Aligned_cols=37 Identities=19% Similarity=0.517 Sum_probs=28.6
Q ss_pred CceEeCCCceeCCCceecccCCCCCC-cEEcC-----C--CeEEccCCceeccCCC
Q psy8484 57 HVRICCEGYEDDHGSCRPVCERECVF-GSCTS-----P--NQCTCSPGYVVINEAS 104 (132)
Q Consensus 57 ~~c~C~~Gy~~~~~~C~~~C~~~C~n-G~C~~-----p--~~C~C~~G~~G~~~c~ 104 (132)
..|.|.+||. ..+|.| |+|+. . ..|.|++||+|.. |+
T Consensus 3 ~~C~C~~g~~----------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~-Ce 47 (52)
T 3ca7_A 3 PTYKCPETFD----------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQR-CE 47 (52)
T ss_dssp CCBCCCHHHH----------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTT-SC
T ss_pred eeeECCCCCc----------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCC-Cc
Confidence 4688999986 247887 89984 2 3799999999986 54
No 37
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.80 E-value=0.00088 Score=47.16 Aligned_cols=52 Identities=29% Similarity=0.601 Sum_probs=36.0
Q ss_pred CCCCC-cEEcC---CCeEEccCCceeccCCCC--CccccCCCCCCC-C---EEcC----CCceeCCCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCSPGYVVINEASP--NICEPHCAECVN-G---VCSA----PNTCDCLDVL 132 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~--~~C~~~C~~C~n-G---~C~~----p~~C~C~~G~ 132 (132)
.+|.| |+|+. ...|.|++||.|.. |+. +.|.+ | .|.| + .|++ .+.|.|++||
T Consensus 53 ~pC~n~g~C~~~~g~y~C~C~~G~~G~~-C~~~~~~c~~-c-~~~~~~C~~~C~~~~g~~y~C~C~~Gy 118 (142)
T 2c4f_L 53 SPCQNGGSCKDQLQSYICFCLPAFEGRN-CETHKDDQLI-C-VNENGGCEQYCSDHTGTKRSCRCHEGY 118 (142)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTEESTT-SCEEGGGCCS-T-TTGGGGCSSEEECCTTSCCEEECCTTE
T ss_pred CCcCCCCEEeCCCCCEEeeCCCCccCCc-cccCcccccc-c-cCCCCCccCEeECCCCCCEEEECCCCc
Confidence 57986 89974 34899999999987 653 33321 2 3334 3 7875 3589999997
No 38
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.78 E-value=0.00024 Score=53.29 Aligned_cols=53 Identities=25% Similarity=0.657 Sum_probs=12.9
Q ss_pred CCCCC-cEEcC---CCeEEccCCceeccCCCC---CccccCCCCCCCCEEcC-C--CceeCCCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCSPGYVVINEASP---NICEPHCAECVNGVCSA-P--NTCDCLDVL 132 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~---~~C~~~C~~C~nG~C~~-p--~~C~C~~G~ 132 (132)
.+|.| |+|+. ...|.|++||.|.. |.. +.|...=.+|.+ .|++ + +.|.|++||
T Consensus 48 ~pC~ngg~C~n~~g~y~C~C~~Gf~G~~-Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy 110 (195)
T 1nfu_B 48 SPCQNQGKCKDGLGEYTCTCLEGFEGKN-CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGY 110 (195)
T ss_dssp ----------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTE
T ss_pred CCCCCCCEeECCCCCeeEeCCCCceecc-ccccccccccCCCCCCCC-EeECCCCCeEEECCCCc
Confidence 35665 66753 34577777777765 432 335432004554 6664 2 467777775
No 39
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.71 E-value=0.0003 Score=49.22 Aligned_cols=52 Identities=25% Similarity=0.676 Sum_probs=13.9
Q ss_pred CCCCC-cEEcC---CCeEEccCCceeccCCCC---CccccCCC-CCCCCEEcC-C--CceeCCCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCSPGYVVINEASP---NICEPHCA-ECVNGVCSA-P--NTCDCLDVL 132 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~~---~~C~~~C~-~C~nG~C~~-p--~~C~C~~G~ 132 (132)
.+|.| |+|+. ...|.|++||.|.. |.. +.|... . +|.+ .|++ + +.|.|++||
T Consensus 48 ~pC~n~g~C~~~~~~y~C~C~~G~~G~~-C~~~i~d~C~~~-~~~C~~-~C~~~~g~y~C~C~~Gy 110 (134)
T 2vh0_B 48 SPCQNQGKCKDGLGEYTCTCLEGFEGKN-CELFTRKLCSLD-NGDCDQ-FCHEEQNSVVCSCARGY 110 (134)
T ss_dssp ----------------------------------CCGGGTG-GGGCSS-EEEEETTEEEEECCTTE
T ss_pred CCCCCcCCcccCCCCEEeeCCCCccCCc-cccCCCCccccC-CCCCCC-EeECCCCCEEEECCCCc
Confidence 35775 67763 34688888888876 543 335432 1 4555 6765 2 478888776
No 40
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.67 E-value=0.001 Score=49.76 Aligned_cols=23 Identities=35% Similarity=1.009 Sum_probs=19.7
Q ss_pred cCCC-CCCC-CEEcCCCceeCCCCC
Q psy8484 110 PHCA-ECVN-GVCSAPNTCDCLDVL 132 (132)
Q Consensus 110 ~~C~-~C~n-G~C~~p~~C~C~~G~ 132 (132)
+.|. +|.| |.|++|++|.|++||
T Consensus 149 ~~C~~~C~ngG~Cv~P~~C~C~~Gw 173 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERRICECPDGF 173 (188)
T ss_dssp CCCTTCCCTTCEECTTSCEECCTTC
T ss_pred CccCCCCCCCCEeCCCCcccCcCCC
Confidence 5555 7776 799999999999998
No 41
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.66 E-value=0.00025 Score=49.94 Aligned_cols=43 Identities=26% Similarity=0.566 Sum_probs=30.7
Q ss_pred CeEEccCCce---eccCC-CCCccccCCCCCCCCEEcC-C--CceeCCCCC
Q psy8484 89 NQCTCSPGYV---VINEA-SPNICEPHCAECVNGVCSA-P--NTCDCLDVL 132 (132)
Q Consensus 89 ~~C~C~~G~~---G~~~c-~~~~C~~~C~~C~nG~C~~-p--~~C~C~~G~ 132 (132)
..|.|++||. |.. | ++++|...=..|.||+|++ + ++|.|++||
T Consensus 88 ~~C~C~~Gy~~~~g~~-C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy 137 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQ-CEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGM 137 (147)
T ss_dssp CCTTTCTTEEEEETTE-EEECCHHHHSTTCSSSSEEEEETTEEEEECCTTC
T ss_pred CcccCCCccccCCCCc-cCccccccCCCCCCCCCEEECCCCCEEeeCCCCC
Confidence 4678999996 544 3 4566763301588899997 3 699999998
No 42
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.44 E-value=0.0015 Score=37.95 Aligned_cols=26 Identities=31% Similarity=0.815 Sum_probs=21.2
Q ss_pred CCCCCcEEcC-----CCeEEccCCceeccCCC
Q psy8484 78 RECVFGSCTS-----PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 78 ~~C~nG~C~~-----p~~C~C~~G~~G~~~c~ 104 (132)
.+|.||+|+. ...|+|++||+|.. |+
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~GytG~~-Ce 42 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVR-CE 42 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCSSTT-SC
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCccCC-CC
Confidence 5899999973 34799999999987 54
No 43
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.39 E-value=0.00019 Score=51.25 Aligned_cols=29 Identities=21% Similarity=0.479 Sum_probs=19.6
Q ss_pred CCCccccCCCCCCCCEEcCC---CceeCCCCC
Q psy8484 104 SPNICEPHCAECVNGVCSAP---NTCDCLDVL 132 (132)
Q Consensus 104 ~~~~C~~~C~~C~nG~C~~p---~~C~C~~G~ 132 (132)
++++|...=.+|.||+|++. ++|.|++||
T Consensus 121 dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy 152 (162)
T 1uzk_A 121 DIDECQELPGLCQGGKCINTFGSFQCRCPTGY 152 (162)
T ss_dssp ECCHHHHCGGGGBTSEEEECSSCEEEECCTTC
T ss_pred ccccccCCCCCcCCCEeEcCCCCEEeeCCCCc
Confidence 34455432005888999973 699999998
No 44
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=96.11 E-value=0.0036 Score=37.80 Aligned_cols=26 Identities=27% Similarity=0.551 Sum_probs=20.8
Q ss_pred CCCCC-cEEc--------CCCeEEccCCceeccCCC
Q psy8484 78 RECVF-GSCT--------SPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 78 ~~C~n-G~C~--------~p~~C~C~~G~~G~~~c~ 104 (132)
.+|+| |+|. ....|.|++||+|.. |+
T Consensus 14 ~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~-CE 48 (55)
T 3u7u_G 14 TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDR-CQ 48 (55)
T ss_dssp TTSCTTCEEEEECCC--CCCEEEEECTTEESTT-SC
T ss_pred CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCC-cC
Confidence 58998 8994 235799999999997 54
No 45
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.03 E-value=0.004 Score=35.56 Aligned_cols=25 Identities=24% Similarity=0.521 Sum_probs=20.4
Q ss_pred CCCC-cEEc-----CCCeEEccCCceeccCCC
Q psy8484 79 ECVF-GSCT-----SPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 79 ~C~n-G~C~-----~p~~C~C~~G~~G~~~c~ 104 (132)
+|.| |+|+ ....|.|++||+|.. |+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~-Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDR-CQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTT-TC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCc-CC
Confidence 7997 8997 345799999999986 54
No 46
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=95.91 E-value=0.0032 Score=52.89 Aligned_cols=44 Identities=25% Similarity=0.606 Sum_probs=13.0
Q ss_pred CCeEEccCCceeccCCC---CCccc-----cCCC--CCCC-CE----EcC-CCceeCCCCC
Q psy8484 88 PNQCTCSPGYVVINEAS---PNICE-----PHCA--ECVN-GV----CSA-PNTCDCLDVL 132 (132)
Q Consensus 88 p~~C~C~~G~~G~~~c~---~~~C~-----~~C~--~C~n-G~----C~~-p~~C~C~~G~ 132 (132)
.++|.|.+||.|.. |+ ++..+ ..|. +|.+ |. |.. .++|.|++||
T Consensus 459 tg~C~C~~g~~G~~-Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~ 518 (525)
T 4aqs_A 459 TGYCYCKRLVTGQR-CDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHM 518 (525)
T ss_dssp TCCBCBCTTCCSTT-TCC-------------------------------------------
T ss_pred CCEEECCCCCcCCC-cccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCC
Confidence 35799999999987 53 21111 1133 5554 34 433 3689999998
No 47
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.88 E-value=0.0072 Score=35.68 Aligned_cols=25 Identities=28% Similarity=0.672 Sum_probs=20.4
Q ss_pred CCCC-cEEc--C---CCeEEccCCceeccCCC
Q psy8484 79 ECVF-GSCT--S---PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 79 ~C~n-G~C~--~---p~~C~C~~G~~G~~~c~ 104 (132)
+|.| |+|+ . ...|.|++||+|.. |+
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~-Ce 43 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDR-CQ 43 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSS-SC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCc-CC
Confidence 7997 8998 2 35799999999987 54
No 48
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.87 E-value=0.004 Score=41.96 Aligned_cols=72 Identities=17% Similarity=0.482 Sum_probs=22.0
Q ss_pred CceEeCCCceeCCCceecccCC---CCCCcEEcC---CCeEEccCCceecc--CC-CCCccccCCCCCCCCEEcC---CC
Q psy8484 57 HVRICCEGYEDDHGSCRPVCER---ECVFGSCTS---PNQCTCSPGYVVIN--EA-SPNICEPHCAECVNGVCSA---PN 124 (132)
Q Consensus 57 ~~c~C~~Gy~~~~~~C~~~C~~---~C~nG~C~~---p~~C~C~~G~~G~~--~c-~~~~C~~~C~~C~nG~C~~---p~ 124 (132)
..-....||.+.... +..|.. +|. ..|+. ...|.|++||.|.+ .| ++++|... .+|. +.|++ .+
T Consensus 14 ~~~~~~~~~~~~~Cd-~neC~~~~~~C~-~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~-~~C~-~~C~n~~gsy 89 (107)
T 2w2n_E 14 DIPTTENLYFQGAMG-TNECLDNNGGCS-YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDP-DTCS-QLCVNLEGGY 89 (107)
T ss_dssp ------CCCCSCCBS-CCGGGTGGGGCS-SEEECCSBSCEEECCTTCEEETTTEEEC-----------------------
T ss_pred cccccCCCcCCCCCc-CccCcCCCCCCC-CEeEeCCCCeEEECCCCccccCCCccccccccCCC-CCcC-CeeecCCCCE
Confidence 334566777765321 222321 232 26763 46899999999942 12 34455421 1454 67776 36
Q ss_pred ceeCCCCC
Q psy8484 125 TCDCLDVL 132 (132)
Q Consensus 125 ~C~C~~G~ 132 (132)
.|.|++||
T Consensus 90 ~C~C~~Gy 97 (107)
T 2w2n_E 90 KCQCEEGF 97 (107)
T ss_dssp --------
T ss_pred EEECCCCc
Confidence 89999987
No 49
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=95.83 E-value=0.019 Score=38.63 Aligned_cols=54 Identities=22% Similarity=0.592 Sum_probs=35.8
Q ss_pred cCCCCCC-cEEc---CCCeEEccCCceeccCCCCC----ccccCCC-CCCCCEEcC---CCceeCCCCC
Q psy8484 76 CERECVF-GSCT---SPNQCTCSPGYVVINEASPN----ICEPHCA-ECVNGVCSA---PNTCDCLDVL 132 (132)
Q Consensus 76 C~~~C~n-G~C~---~p~~C~C~~G~~G~~~c~~~----~C~~~C~-~C~nG~C~~---p~~C~C~~G~ 132 (132)
|...|.| |+|+ ....|.|.+||.|.. |+.. .|... . +|.+ +|++ .+.|.|++||
T Consensus 18 C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~-C~~~~~~~~C~~~-~~~C~~-~C~n~~g~y~C~C~~G~ 83 (114)
T 1aut_L 18 CASLCCGHGTCIDGIGSFSCDCRSGWEGRF-CQREVSFLNCSLD-NGGCTH-YCLEEVGWRRCSCAPGY 83 (114)
T ss_dssp SSSTTTTSEEECCCSSCCCEEECTTEESTT-SCEECCSSSSSSG-GGGCSS-EEEECSSSEEEECCTTE
T ss_pred ccccCCCcCCCCCCCCCcEeeCCCCCcCCC-cCcCCcCCcCcCC-CCCCCC-EeECCCCCEEeECCCCe
Confidence 4445664 7885 779999999999987 5421 23211 0 2333 8876 3689999997
No 50
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.36 E-value=0.008 Score=36.58 Aligned_cols=26 Identities=31% Similarity=0.760 Sum_probs=21.0
Q ss_pred CCCCC-cEEcC--------CCeEEccCCceeccCCC
Q psy8484 78 RECVF-GSCTS--------PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 78 ~~C~n-G~C~~--------p~~C~C~~G~~G~~~c~ 104 (132)
.+|.| |+|+. ...|.|++||+|.. |+
T Consensus 12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~-Ce 46 (63)
T 1hae_A 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR-CT 46 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCEEEECCTTEESTT-SC
T ss_pred CcCCCCcEEecCCccCCCCCEEEECCCCCcCCc-cC
Confidence 58997 89973 34799999999987 53
No 51
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.10 E-value=0.013 Score=32.07 Aligned_cols=24 Identities=33% Similarity=0.776 Sum_probs=19.4
Q ss_pred CCCCC-cEEcC---CCeEEccCCceecc
Q psy8484 78 RECVF-GSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~~G~~G~~ 101 (132)
.+|.| |+|+. ...|.|++||.|..
T Consensus 9 ~pC~ngg~C~~~~~~~~C~C~~G~~G~~ 36 (39)
T 1edm_B 9 NPCLNGGSCKDDINSYECWCPFGFEGKN 36 (39)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTCCSTT
T ss_pred CCCCCCCEeEcCCCceEeECCCCCcCCc
Confidence 57887 89974 34799999999986
No 52
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.08 E-value=0.0081 Score=35.73 Aligned_cols=33 Identities=24% Similarity=0.668 Sum_probs=23.9
Q ss_pred ceecccCCCCCC-cEEc--C---CCeEEccCCceeccCCC
Q psy8484 71 SCRPVCERECVF-GSCT--S---PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 71 ~C~~~C~~~C~n-G~C~--~---p~~C~C~~G~~G~~~c~ 104 (132)
.|.+.-..+|.| |+|+ . ...|.|++||+|.. |+
T Consensus 5 ~C~~~~~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~-Ce 43 (53)
T 1nql_B 5 ECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGER-CQ 43 (53)
T ss_dssp ECCSTTCCEECTTCEEEEETTTTEEEEEECTTEESTT-SC
T ss_pred ccCCCCCCCCCCCeEEeeecCCCCEEEecCCCCcCCC-CC
Confidence 344444568998 8997 2 24799999999987 54
No 53
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.07 E-value=0.0093 Score=38.35 Aligned_cols=50 Identities=24% Similarity=0.614 Sum_probs=26.6
Q ss_pred CCCcEEcC---CCeEEccCCceecc---CC-CCCccccCCCCCCCCEEcC---CCceeC--CCCC
Q psy8484 80 CVFGSCTS---PNQCTCSPGYVVIN---EA-SPNICEPHCAECVNGVCSA---PNTCDC--LDVL 132 (132)
Q Consensus 80 C~nG~C~~---p~~C~C~~G~~G~~---~c-~~~~C~~~C~~C~nG~C~~---p~~C~C--~~G~ 132 (132)
|.+|+|+. ...|.|++||.+.. .| +.+.|... +|. +.|++ .+.|.| .+||
T Consensus 13 C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~--~C~-~~C~n~~g~y~C~C~g~~G~ 74 (87)
T 1z6c_A 13 CGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSEN--MCA-QLCVNYPGGYTCYCDGKKGF 74 (87)
T ss_dssp BTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHS--CCS-SEECCCSSSCCEECCSSSCC
T ss_pred CCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCC--CCC-CEEEccCCCEEEECCCCcCC
Confidence 43355542 35677777777421 12 33445433 555 67765 257777 3554
No 54
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=94.93 E-value=0.038 Score=48.07 Aligned_cols=45 Identities=22% Similarity=0.601 Sum_probs=34.0
Q ss_pred CCceE-eCCCceeCCCc-------------ee--cccC---CCCCC-cEEcCC-------CeEEccCCceec
Q psy8484 56 THVRI-CCEGYEDDHGS-------------CR--PVCE---RECVF-GSCTSP-------NQCTCSPGYVVI 100 (132)
Q Consensus 56 ~~~c~-C~~Gy~~~~~~-------------C~--~~C~---~~C~n-G~C~~p-------~~C~C~~G~~G~ 100 (132)
.+.|. |.+||+|.... |+ ..|. .+|.+ +.|+.. .+|.|.+||.|.
T Consensus 69 sY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~Gd 140 (634)
T 1yo8_A 69 GFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGD 140 (634)
T ss_dssp SEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEES
T ss_pred ceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCcccc
Confidence 45788 99999987644 63 4575 37885 899743 479999999994
No 55
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=94.92 E-value=0.0078 Score=38.58 Aligned_cols=46 Identities=30% Similarity=0.691 Sum_probs=32.2
Q ss_pred CCceEeCCCceeC---CCceec--ccC-C--CCCCcEEcC---CCeEEccCCceecc
Q psy8484 56 THVRICCEGYEDD---HGSCRP--VCE-R--ECVFGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 56 ~~~c~C~~Gy~~~---~~~C~~--~C~-~--~C~nG~C~~---p~~C~C~~G~~G~~ 101 (132)
.+.|.|.+||++. +..|+. .|. . .|.+|+|++ ...|.|++||.+..
T Consensus 24 ~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 24 DFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp EEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred CEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence 3578999999953 345632 342 2 366789974 35799999999864
No 56
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=94.81 E-value=0.013 Score=46.10 Aligned_cols=51 Identities=27% Similarity=0.606 Sum_probs=33.7
Q ss_pred CC-CcEEcCCCeEEccCCceecc-CCCCC---------ccccC-CC-CCC-CCEEcCCCceeCCCCC
Q psy8484 80 CV-FGSCTSPNQCTCSPGYVVIN-EASPN---------ICEPH-CA-ECV-NGVCSAPNTCDCLDVL 132 (132)
Q Consensus 80 C~-nG~C~~p~~C~C~~G~~G~~-~c~~~---------~C~~~-C~-~C~-nG~C~~p~~C~C~~G~ 132 (132)
|. ||.|.- +.|.|.+||.|.. +|+.. .|... =. .|. +|.|+- |+|.|..+|
T Consensus 198 C~g~G~~~C-G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~ 262 (280)
T 2p26_A 198 CHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSD 262 (280)
T ss_dssp GGGSEEEET-TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCS
T ss_pred cCCCCeECC-CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCC
Confidence 55 688874 8999999999987 23222 35311 00 354 688875 899997664
No 57
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.04 E-value=0.02 Score=34.67 Aligned_cols=25 Identities=20% Similarity=0.610 Sum_probs=19.7
Q ss_pred CCCC-cEEcC-------CCeEEccCCceeccCCC
Q psy8484 79 ECVF-GSCTS-------PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 79 ~C~n-G~C~~-------p~~C~C~~G~~G~~~c~ 104 (132)
+|.| |+|+. ...|.|++||.|.. |+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~-Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQR-CE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSS-SC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCC-Cc
Confidence 6888 79972 12799999999987 44
No 58
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=93.89 E-value=0.028 Score=30.65 Aligned_cols=25 Identities=32% Similarity=0.748 Sum_probs=18.6
Q ss_pred CccccCCCCCCC-CEEcC-C--CceeCCCCC
Q psy8484 106 NICEPHCAECVN-GVCSA-P--NTCDCLDVL 132 (132)
Q Consensus 106 ~~C~~~C~~C~n-G~C~~-p--~~C~C~~G~ 132 (132)
+.|... +|.| |+|++ . +.|.|++||
T Consensus 4 d~C~~~--pC~ngg~C~~~~~~~~C~C~~G~ 32 (39)
T 1edm_B 4 DQCESN--PCLNGGSCKDDINSYECWCPFGF 32 (39)
T ss_dssp CTTTTC--CCCTTCEEEEETTEEEEECCTTC
T ss_pred ccCCCC--CCCCCCEeEcCCCceEeECCCCC
Confidence 445544 8887 79986 2 589999998
No 59
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=93.84 E-value=0.023 Score=39.54 Aligned_cols=45 Identities=29% Similarity=0.659 Sum_probs=32.0
Q ss_pred CceEeCCCceeC-CCcee--cccC---CCCCCcEEcC---CCeEEccCCceecc
Q psy8484 57 HVRICCEGYEDD-HGSCR--PVCE---RECVFGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 57 ~~c~C~~Gy~~~-~~~C~--~~C~---~~C~nG~C~~---p~~C~C~~G~~G~~ 101 (132)
+.|.|.+||++. +..|+ ..|. .+|.||+|++ ..+|.|++||.|..
T Consensus 88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCT
T ss_pred CcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCC
Confidence 456899999752 34553 2353 3588899974 35799999999975
No 60
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=93.80 E-value=0.018 Score=47.87 Aligned_cols=42 Identities=24% Similarity=0.606 Sum_probs=0.0
Q ss_pred CCCC-cEEcCCCeEEccCCceeccCCCCCccccCCCCCCC-CEEcC-CCceeC
Q psy8484 79 ECVF-GSCTSPNQCTCSPGYVVINEASPNICEPHCAECVN-GVCSA-PNTCDC 128 (132)
Q Consensus 79 ~C~n-G~C~~p~~C~C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~-p~~C~C 128 (132)
+|.| |+|....+|.|.+||.|.. |+.. .|.+ |+|++ .|+|.=
T Consensus 372 ~C~ngg~C~~~~~C~C~~G~~G~~-Ce~c-------~C~~~g~C~~~~Gqc~~ 416 (426)
T 3zyj_B 372 HCQNGGTCHNNVRCLCPAAYTGIL-CEKL-------RCEEAGSCGSDSGQGAP 416 (426)
T ss_dssp -----------------------------------------------------
T ss_pred cCCCCCCcCCCCCCcCCCCCcCCC-CcCC-------CCCCCCcccCCCCccCC
Confidence 5665 6787656888999999976 4321 4553 67765 466653
No 61
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=93.63 E-value=0.048 Score=39.07 Aligned_cols=50 Identities=22% Similarity=0.654 Sum_probs=30.9
Q ss_pred cEEc-CCCeE-EccCCceecc--CCCCCcccc--------CCC--CCCC-C------EEcC-CCceeCCCCC
Q psy8484 83 GSCT-SPNQC-TCSPGYVVIN--EASPNICEP--------HCA--ECVN-G------VCSA-PNTCDCLDVL 132 (132)
Q Consensus 83 G~C~-~p~~C-~C~~G~~G~~--~c~~~~C~~--------~C~--~C~n-G------~C~~-p~~C~C~~G~ 132 (132)
+.|. ..++| .|.++|.|.. .|.+...+. .|. .|.+ | .|.. .++|.|.+||
T Consensus 68 ~~C~~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~ 139 (162)
T 1klo_A 68 GNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHV 139 (162)
T ss_dssp CCBCTTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTE
T ss_pred CcccCCCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCC
Confidence 4675 36789 4888888876 122332221 222 4553 4 7876 5899999886
No 62
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=93.53 E-value=0.03 Score=33.64 Aligned_cols=24 Identities=33% Similarity=0.645 Sum_probs=17.4
Q ss_pred ccccCCCCCCC-CEEc-----C---CCceeCCCCC
Q psy8484 107 ICEPHCAECVN-GVCS-----A---PNTCDCLDVL 132 (132)
Q Consensus 107 ~C~~~C~~C~n-G~C~-----~---p~~C~C~~G~ 132 (132)
+|... +|+| |+|. + .+.|.|++||
T Consensus 10 eC~s~--pC~NgGtC~~~~~~d~~~~y~C~C~~g~ 42 (55)
T 3u7u_G 10 EKEKT--FCVNGGECFMVKDLSNPSRYLCKCPNEF 42 (55)
T ss_dssp STTTT--TSCTTCEEEEECCC--CCCEEEEECTTE
T ss_pred CCcCC--CCCCCCCcCCCCccCCCCCEeEeCCCCC
Confidence 44444 8998 6993 3 3689999997
No 63
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=93.52 E-value=0.013 Score=51.56 Aligned_cols=37 Identities=19% Similarity=0.440 Sum_probs=28.3
Q ss_pred EEccCCceeccCCCCCccccCCC-CCC-CCEEcCCCceeCCCCC
Q psy8484 91 CTCSPGYVVINEASPNICEPHCA-ECV-NGVCSAPNTCDCLDVL 132 (132)
Q Consensus 91 C~C~~G~~G~~~c~~~~C~~~C~-~C~-nG~C~~p~~C~C~~G~ 132 (132)
..|.+||.|.+ |.. ++.|. .|. ||.|++ |+|.|.+||
T Consensus 520 ~~C~~gw~g~d-c~i---~~~Cp~~C~ghG~C~~-G~C~Cd~G~ 558 (725)
T 2e26_A 520 FDKQQTWAIDN-VYI---GDGCLDMCSGHGRCVQ-GSCVCDEQW 558 (725)
T ss_dssp CCTTCCEEEEE-EEE---ESCSSGGGGGSEEEET-TEEEECTTE
T ss_pred CccCCCccccc-ccc---cCCCCcccCCCcEECC-CCEeeCCCc
Confidence 47899999998 541 23444 555 899987 999999997
No 64
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=93.09 E-value=0.1 Score=40.36 Aligned_cols=45 Identities=24% Similarity=0.644 Sum_probs=32.4
Q ss_pred CCceEeCCCceeCCCc-eecccC----CCCCCcEEcC---CCeEEccCCceecc
Q psy8484 56 THVRICCEGYEDDHGS-CRPVCE----RECVFGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~-C~~~C~----~~C~nG~C~~---p~~C~C~~G~~G~~ 101 (132)
.+.|.|.+||.|..+. =+..|. .+|.| .|++ ...|.|.+||.|..
T Consensus 25 ~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 25 GYTCTCSPGYEGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGE 77 (317)
T ss_dssp SCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCT
T ss_pred CeEEECCCCCcCCccccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccccc
Confidence 4679999999987432 123353 46777 8874 46899999999864
No 65
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=92.99 E-value=0.062 Score=31.69 Aligned_cols=33 Identities=21% Similarity=0.652 Sum_probs=22.7
Q ss_pred ceecccCCCCCCcEEc--C---CCeEEccCCceeccCCC
Q psy8484 71 SCRPVCERECVFGSCT--S---PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 71 ~C~~~C~~~C~nG~C~--~---p~~C~C~~G~~G~~~c~ 104 (132)
.|.+....-|.||+|. . ...|.|++||+|.. |+
T Consensus 11 ~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~G~R-Ce 48 (50)
T 2rnl_A 11 PCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYFGER-CG 48 (50)
T ss_dssp TTTTTGGGTCSSSEEEEETTTTEEEEECCSSCCSSS-CC
T ss_pred ccCchhhCcCCCCEEEEecCCCCeeEECCCCccccc-cc
Confidence 4443334568899996 1 13699999999986 54
No 66
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=92.83 E-value=0.042 Score=36.78 Aligned_cols=45 Identities=20% Similarity=0.618 Sum_probs=13.4
Q ss_pred CCceEeCCCceeC-CCcee--cccC--CCCCCcEEcC---CCeEEccCCceecc
Q psy8484 56 THVRICCEGYEDD-HGSCR--PVCE--RECVFGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 56 ~~~c~C~~Gy~~~-~~~C~--~~C~--~~C~nG~C~~---p~~C~C~~G~~G~~ 101 (132)
.+.|.|.+||++. +..|+ ..|. .+|. +.|++ ...|.|++||.|..
T Consensus 49 ~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~-~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 49 GYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp SCEEECCTTCEEETTTEEEC----------------------------------
T ss_pred CeEEECCCCccccCCCccccccccCCCCCcC-CeeecCCCCEEEECCCCceECC
Confidence 5689999999984 34553 2343 3454 67763 46799999999864
No 67
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=92.69 E-value=0.055 Score=40.33 Aligned_cols=41 Identities=29% Similarity=0.838 Sum_probs=16.7
Q ss_pred CCceEeCCCceeCCCcee----cccCC---CCCCcEEcC---CCeEEccCCcee
Q psy8484 56 THVRICCEGYEDDHGSCR----PVCER---ECVFGSCTS---PNQCTCSPGYVV 99 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C~----~~C~~---~C~nG~C~~---p~~C~C~~G~~G 99 (132)
.+.|.|.+||+|.. |+ ..|.. +|.+ .|+. ...|.|.+||.+
T Consensus 62 ~y~C~C~~Gf~G~~--Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l 112 (195)
T 1nfu_B 62 EYTCTCLEGFEGKN--CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTL 112 (195)
T ss_dssp ---------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEE
T ss_pred CeeEeCCCCceecc--ccccccccccCCCCCCCC-EeECCCCCeEEECCCCcee
Confidence 46799999999863 42 22542 4666 8863 357999999993
No 68
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=92.37 E-value=0.077 Score=32.44 Aligned_cols=24 Identities=29% Similarity=0.821 Sum_probs=19.4
Q ss_pred CCCCC---cEEcC---CCeEEccCCce-ecc
Q psy8484 78 RECVF---GSCTS---PNQCTCSPGYV-VIN 101 (132)
Q Consensus 78 ~~C~n---G~C~~---p~~C~C~~G~~-G~~ 101 (132)
.||.| |+|+. ...|.|++||. |.+
T Consensus 17 nPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~ 47 (61)
T 2k2s_B 17 NPCGPEAAGTCKETNSGYICRCNQGYRISLD 47 (61)
T ss_dssp CSSCSSSCCEEEECSSEEEEECCTTEEEEEC
T ss_pred CCCcCCCccccccCCCceEeECCCCCccCCC
Confidence 57986 49974 34799999999 987
No 69
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=92.33 E-value=0.039 Score=31.71 Aligned_cols=19 Identities=32% Similarity=0.698 Sum_probs=16.0
Q ss_pred CCCCCEEcC-----CCceeCCCCC
Q psy8484 114 ECVNGVCSA-----PNTCDCLDVL 132 (132)
Q Consensus 114 ~C~nG~C~~-----p~~C~C~~G~ 132 (132)
+|.||+|.. ...|.|++||
T Consensus 13 pC~nG~C~~~~~~~~~~C~C~~Gy 36 (46)
T 1k36_A 13 YCLHGQCIYLVDMSQNYCRCEVGY 36 (46)
T ss_dssp SCSSEEEEEETTTTEEEEEECTTC
T ss_pred CCCCCEeeccCCCCCEEEECCCCC
Confidence 899999984 2589999998
No 70
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=92.32 E-value=0.051 Score=45.19 Aligned_cols=70 Identities=19% Similarity=0.324 Sum_probs=20.7
Q ss_pred CceEeCCCceeCCC-ceeccc-CCCCCCcEE-----cCCCeEE-ccCCceeccCCCCCccccCCCCCCC-CEEcCCCcee
Q psy8484 57 HVRICCEGYEDDHG-SCRPVC-ERECVFGSC-----TSPNQCT-CSPGYVVINEASPNICEPHCAECVN-GVCSAPNTCD 127 (132)
Q Consensus 57 ~~c~C~~Gy~~~~~-~C~~~C-~~~C~nG~C-----~~p~~C~-C~~G~~G~~~c~~~~C~~~C~~C~n-G~C~~p~~C~ 127 (132)
.+|.|..||.|.++ .|.+.. ..++.+|.+ ..++.|. |+-++.|.. |+... .+|.| |+|.+...|.
T Consensus 313 ~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~-CD~~t-----~~C~ngg~C~~~~~C~ 386 (426)
T 3zyj_B 313 LTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNV-CDNEL-----LHCQNGGTCHNNVRCL 386 (426)
T ss_dssp EEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------------------
T ss_pred ceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCc-cccCc-----ccCCCCCCcCCCCCCc
Confidence 36778888888753 344432 234555543 1345563 443344443 44321 27886 6898877999
Q ss_pred CCCCC
Q psy8484 128 CLDVL 132 (132)
Q Consensus 128 C~~G~ 132 (132)
|++||
T Consensus 387 C~~G~ 391 (426)
T 3zyj_B 387 CPAAY 391 (426)
T ss_dssp -----
T ss_pred CCCCC
Confidence 99997
No 71
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=92.13 E-value=0.18 Score=35.32 Aligned_cols=44 Identities=27% Similarity=0.610 Sum_probs=28.3
Q ss_pred CCceEeCCCceeCCCceecccCC---CCCCcEE-c---CCCeEEccCCceec
Q psy8484 56 THVRICCEGYEDDHGSCRPVCER---ECVFGSC-T---SPNQCTCSPGYVVI 100 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C~~~C~~---~C~nG~C-~---~p~~C~C~~G~~G~ 100 (132)
.+.|.|.+||+|....=...|.. +|.+ .| + ....|.|++||.+.
T Consensus 68 ~y~C~C~~G~~G~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~ 118 (146)
T 1x7a_L 68 SYECWCQVGFEGKNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLA 118 (146)
T ss_dssp CEEEECCSSEESTTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEEC
T ss_pred CEEEecCCCCcCCcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeC
Confidence 46799999999864211222331 3444 67 4 24679999999953
No 72
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=92.11 E-value=0.092 Score=30.96 Aligned_cols=27 Identities=30% Similarity=0.763 Sum_probs=20.8
Q ss_pred CCCCCCcEEcC-----CCeEEccCCceeccCCC
Q psy8484 77 ERECVFGSCTS-----PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 77 ~~~C~nG~C~~-----p~~C~C~~G~~G~~~c~ 104 (132)
..-|.||.|.- ...|+|.+||+|.. |+
T Consensus 13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~G~R-Ce 44 (50)
T 3e50_C 13 TQFCFHGTCRFLVQEDKPACVCHSGYVGAR-CE 44 (50)
T ss_pred cCcccCCEEeeccCCCCeEEECCCCCcccC-CC
Confidence 34688899962 35799999999987 54
No 73
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=91.59 E-value=0.14 Score=40.22 Aligned_cols=43 Identities=28% Similarity=0.708 Sum_probs=32.7
Q ss_pred CceEeCCCceeCCCcee-c---------ccCC-----CCC-CcEEcCCCeEEccCCceec
Q psy8484 57 HVRICCEGYEDDHGSCR-P---------VCER-----ECV-FGSCTSPNQCTCSPGYVVI 100 (132)
Q Consensus 57 ~~c~C~~Gy~~~~~~C~-~---------~C~~-----~C~-nG~C~~p~~C~C~~G~~G~ 100 (132)
++|.|.+||.|...+|. . .|.. .|. +|.|+- ++|.|..+|.|.
T Consensus 207 G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~~~~ 265 (280)
T 2p26_A 207 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPG 265 (280)
T ss_dssp TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCSSTT
T ss_pred CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCCCCC
Confidence 56899999999977773 1 4642 376 599986 899998888654
No 74
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=91.35 E-value=0.26 Score=33.16 Aligned_cols=59 Identities=17% Similarity=0.437 Sum_probs=38.8
Q ss_pred cCCcceeEEEEEeeeeeeecCCCceEeCCCceeCCCceecc----cCC---CCC-CcEEcC--C------CeEEccCCce
Q psy8484 35 HCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPV----CER---ECV-FGSCTS--P------NQCTCSPGYV 98 (132)
Q Consensus 35 ~C~~~r~~~~~~~~~~~~~~~~~~c~C~~Gy~~~~~~C~~~----C~~---~C~-nG~C~~--p------~~C~C~~G~~ 98 (132)
.|+....++++.. .+..|.|.+||++.+..|++. |.. +|. |+.|.. | -.|.|.+|+.
T Consensus 11 ~C~~NA~C~r~~~-------g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 11 QCPQNSGCFRHLD-------EREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCCTTEEEECCTT-------SCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CCCCCCCeEEcCC-------CCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 5666666654322 255799999999998889553 542 465 677753 3 2588888875
Q ss_pred ec
Q psy8484 99 VI 100 (132)
Q Consensus 99 G~ 100 (132)
-+
T Consensus 84 ~~ 85 (99)
T 1ob1_C 84 YP 85 (99)
T ss_dssp CE
T ss_pred cc
Confidence 43
No 75
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=91.25 E-value=0.13 Score=35.39 Aligned_cols=41 Identities=29% Similarity=0.838 Sum_probs=16.2
Q ss_pred CCceEeCCCceeCCCcee----cccCC---CCCCcEEcC---CCeEEccCCcee
Q psy8484 56 THVRICCEGYEDDHGSCR----PVCER---ECVFGSCTS---PNQCTCSPGYVV 99 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C~----~~C~~---~C~nG~C~~---p~~C~C~~G~~G 99 (132)
.+.|.|.+||+|.. |+ ..|.. +|.+ .|+. ...|.|.+||.+
T Consensus 62 ~y~C~C~~G~~G~~--C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l 112 (134)
T 2vh0_B 62 EYTCTCLEGFEGKN--CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTL 112 (134)
T ss_dssp ---------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEE
T ss_pred CEEeeCCCCccCCc--cccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEE
Confidence 46799999999863 42 12532 4555 7864 347999999994
No 76
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=90.66 E-value=0.07 Score=38.19 Aligned_cols=15 Identities=27% Similarity=0.713 Sum_probs=9.1
Q ss_pred CEEcC-CCcee-CCCCC
Q psy8484 118 GVCSA-PNTCD-CLDVL 132 (132)
Q Consensus 118 G~C~~-p~~C~-C~~G~ 132 (132)
+.|.. .++|. |.++|
T Consensus 68 ~~C~~~tG~C~~C~~g~ 84 (162)
T 1klo_A 68 GNCNRLTGECLKCIYNT 84 (162)
T ss_dssp CCBCTTTCCBCCBCTTE
T ss_pred CcccCCCCcccCCCCCC
Confidence 36754 47784 77664
No 77
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=90.56 E-value=0.23 Score=31.60 Aligned_cols=44 Identities=27% Similarity=0.609 Sum_probs=28.1
Q ss_pred CCceEeCCCceeC--CCceec--ccC-CCCCCcEEcC---CCeEEccCCceecc
Q psy8484 56 THVRICCEGYEDD--HGSCRP--VCE-RECVFGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 56 ~~~c~C~~Gy~~~--~~~C~~--~C~-~~C~nG~C~~---p~~C~C~~G~~G~~ 101 (132)
.+.|.|.+||++. +..|+. .|. .+|. ++|+. ...|.|+ |+.|..
T Consensus 24 ~y~C~C~~G~~~~~~g~~C~dideC~~~~C~-~~C~n~~g~y~C~C~-g~~G~~ 75 (87)
T 1z6c_A 24 DFECECPEGYRYNLKSKSCEDIDECSENMCA-QLCVNYPGGYTCYCD-GKKGFK 75 (87)
T ss_dssp BCCCSSSTTCEEETTTTEEECCCHHHHSCCS-SEECCCSSSCCEECC-SSSCCB
T ss_pred CEEEECCCCceECCCCCcCCCcCeeCCCCCC-CEEEccCCCEEEECC-CCcCCc
Confidence 4679999999964 335532 232 3565 67864 4689997 666654
No 78
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=90.54 E-value=0.13 Score=41.17 Aligned_cols=12 Identities=25% Similarity=0.861 Sum_probs=6.6
Q ss_pred CeEEccCCceec
Q psy8484 89 NQCTCSPGYVVI 100 (132)
Q Consensus 89 ~~C~C~~G~~G~ 100 (132)
..|.|.+||.+.
T Consensus 60 ~~C~C~~g~~~~ 71 (400)
T 3p5b_L 60 YKCQCEEGFQLD 71 (400)
T ss_dssp CBCCCCTTCCCC
T ss_pred eeeecccccccc
Confidence 355566666554
No 79
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=90.11 E-value=0.1 Score=42.93 Aligned_cols=27 Identities=33% Similarity=0.848 Sum_probs=23.4
Q ss_pred cccCCCCC-CcEEcCCCeEEccCCceecc
Q psy8484 74 PVCERECV-FGSCTSPNQCTCSPGYVVIN 101 (132)
Q Consensus 74 ~~C~~~C~-nG~C~~p~~C~C~~G~~G~~ 101 (132)
+.|...|. ||.|+. ++|.|++||.|.+
T Consensus 192 ~~Cp~~CsGhG~C~~-g~C~Cd~G~~g~d 219 (387)
T 2ddu_A 192 EPCPSYCSGHGDCIS-GVCFCDLGYTAAQ 219 (387)
T ss_dssp SCCGGGGGGSEEEET-TEEEECTTEEEET
T ss_pred ccCccccCCCceecC-CeEEecCCcccCC
Confidence 45777888 899988 9999999999974
No 80
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=90.05 E-value=0.32 Score=32.99 Aligned_cols=52 Identities=17% Similarity=0.533 Sum_probs=26.6
Q ss_pred CCC-CcEEcC----CCeEEccCCceecc-CCCCCccccCCC----CCC-CCEEcCC--C--ceeCCCCC
Q psy8484 79 ECV-FGSCTS----PNQCTCSPGYVVIN-EASPNICEPHCA----ECV-NGVCSAP--N--TCDCLDVL 132 (132)
Q Consensus 79 ~C~-nG~C~~----p~~C~C~~G~~G~~-~c~~~~C~~~C~----~C~-nG~C~~p--~--~C~C~~G~ 132 (132)
.|. |+.|.. ..+|+|..||+|.. .|-+. .+.|. +|. |..|... + +|.|.++|
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~--Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA--SITCEENNGGCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC--CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred CCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC--CcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence 344 666653 23577777777754 11111 23342 444 4555532 2 57776653
No 81
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.55 E-value=0.11 Score=41.25 Aligned_cols=43 Identities=33% Similarity=0.720 Sum_probs=11.4
Q ss_pred CceEeCCCceeC--CCcee--cccC--CCCCCcEEcC---CCeEEccCCceec
Q psy8484 57 HVRICCEGYEDD--HGSCR--PVCE--RECVFGSCTS---PNQCTCSPGYVVI 100 (132)
Q Consensus 57 ~~c~C~~Gy~~~--~~~C~--~~C~--~~C~nG~C~~---p~~C~C~~G~~G~ 100 (132)
+.|.|.+||+.. +..|+ ..|. .+|.++ |++ ...|.|.+||...
T Consensus 24 ~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~l~ 75 (386)
T 3v65_B 24 VQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG-CTNSEGAFQCWCEAGYELR 75 (386)
T ss_dssp ----------------------------CCTTE-EC-----CCEECCTTEEEC
T ss_pred cEeECCCCceECCCCCccCccceeCCcCcccCc-CCCCCCCCeEEECCCceEc
Confidence 457777777622 22342 2232 245544 553 3467777777743
No 82
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=89.43 E-value=0.078 Score=37.41 Aligned_cols=44 Identities=25% Similarity=0.600 Sum_probs=28.7
Q ss_pred ceEeCC--CceeCC--Ccee--cccC---CCCCCcEEcC---CCeEEccCCceecc
Q psy8484 58 VRICCE--GYEDDH--GSCR--PVCE---RECVFGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 58 ~c~C~~--Gy~~~~--~~C~--~~C~---~~C~nG~C~~---p~~C~C~~G~~G~~ 101 (132)
.|.|.+ ||++.. ..|+ ..|. .+|.||+|++ ..+|.|++||.|..
T Consensus 101 ~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 101 KILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp HHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCT
T ss_pred eeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCC
Confidence 345555 777652 2332 2353 3588899974 45899999999975
No 83
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=89.00 E-value=0.099 Score=31.54 Aligned_cols=19 Identities=37% Similarity=0.768 Sum_probs=15.6
Q ss_pred CCCC-CEEcC--------CCceeCCCCC
Q psy8484 114 ECVN-GVCSA--------PNTCDCLDVL 132 (132)
Q Consensus 114 ~C~n-G~C~~--------p~~C~C~~G~ 132 (132)
+|.| |+|++ .+.|.|++||
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf 40 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGF 40 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTE
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCC
Confidence 8987 79984 3589999997
No 84
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=88.94 E-value=0.19 Score=34.45 Aligned_cols=26 Identities=23% Similarity=0.595 Sum_probs=19.5
Q ss_pred CCCC-cEEcCC-----C-eEEccCCceeccCCCC
Q psy8484 79 ECVF-GSCTSP-----N-QCTCSPGYVVINEASP 105 (132)
Q Consensus 79 ~C~n-G~C~~p-----~-~C~C~~G~~G~~~c~~ 105 (132)
+|+| |+|+.. . .|.|++||+|.. |++
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~-Ce~ 34 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH-CEI 34 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTT-SCE
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCcc-ccc
Confidence 5887 789642 2 799999999986 553
No 85
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=88.69 E-value=0.23 Score=28.96 Aligned_cols=19 Identities=42% Similarity=0.980 Sum_probs=15.4
Q ss_pred CCCC-CEEc--C---CCceeCCCCC
Q psy8484 114 ECVN-GVCS--A---PNTCDCLDVL 132 (132)
Q Consensus 114 ~C~n-G~C~--~---p~~C~C~~G~ 132 (132)
+|.| |+|+ + .+.|.|++||
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~ 37 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGY 37 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCC
Confidence 7887 7998 3 3689999997
No 86
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=88.49 E-value=0.2 Score=35.44 Aligned_cols=26 Identities=27% Similarity=0.680 Sum_probs=20.6
Q ss_pred CCCC-cEEcCC----C--eEEccCCceeccCCCC
Q psy8484 79 ECVF-GSCTSP----N--QCTCSPGYVVINEASP 105 (132)
Q Consensus 79 ~C~n-G~C~~p----~--~C~C~~G~~G~~~c~~ 105 (132)
+|+| |+|+.. + .|.|++||.|.. |++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~-Cei 46 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH-CEI 46 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTT-SCE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCc-eec
Confidence 6888 899754 2 799999999987 543
No 87
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=88.40 E-value=0.3 Score=31.50 Aligned_cols=27 Identities=30% Similarity=0.816 Sum_probs=20.8
Q ss_pred CCCCCCcEEc-----CCCeEEccCCceeccCCC
Q psy8484 77 ERECVFGSCT-----SPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 77 ~~~C~nG~C~-----~p~~C~C~~G~~G~~~c~ 104 (132)
...|.||.|+ ....|.|.+||+|.. |+
T Consensus 45 ~~yClnG~C~~i~~~~~~~C~C~~GYtG~R-CE 76 (79)
T 1xdt_R 45 KDFCIHGECKYVKELRAPSCICHPGYHGER-CH 76 (79)
T ss_dssp TTCCSSEEECCBGGGTBCCEEECTTEESTT-CC
T ss_pred cCcCCCCEeeeecCCCCeEEEcCCCccccc-cc
Confidence 4578899994 124699999999986 54
No 88
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=87.65 E-value=0.16 Score=30.98 Aligned_cols=25 Identities=24% Similarity=0.701 Sum_probs=18.9
Q ss_pred CccccCCCCCCC---CEEcCC---CceeCCCCC
Q psy8484 106 NICEPHCAECVN---GVCSAP---NTCDCLDVL 132 (132)
Q Consensus 106 ~~C~~~C~~C~n---G~C~~p---~~C~C~~G~ 132 (132)
+.|.+. +|.| |+|++. +.|.|++||
T Consensus 12 d~C~sn--PC~nga~gtC~~~~g~y~C~C~~Gy 42 (61)
T 2k2s_B 12 AACSSN--PCGPEAAGTCKETNSGYICRCNQGY 42 (61)
T ss_dssp CHHHHC--SSCSSSCCEEEECSSEEEEECCTTE
T ss_pred CcCcCC--CCcCCCccccccCCCceEeECCCCC
Confidence 456554 8987 499863 699999997
No 89
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=87.42 E-value=0.27 Score=28.76 Aligned_cols=26 Identities=27% Similarity=0.819 Sum_probs=19.7
Q ss_pred CCCCCcEEc-----CCCeEEccCCceeccCCC
Q psy8484 78 RECVFGSCT-----SPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 78 ~~C~nG~C~-----~p~~C~C~~G~~G~~~c~ 104 (132)
.-|.||.|. ....|+|++||+|.. |+
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~R-Ce 44 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGYIGAR-CE 44 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTEETTT-TC
T ss_pred CcccCCEEEeEcCCCCeEEECCCCcccCC-CC
Confidence 468889995 123699999999986 54
No 90
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=87.05 E-value=1.2 Score=29.88 Aligned_cols=50 Identities=24% Similarity=0.683 Sum_probs=33.0
Q ss_pred CCC-CcEEcC----CCeEEccCCceeccCCCCCcccc----CCC----CCC-CCEEcC--C------CceeCCCCC
Q psy8484 79 ECV-FGSCTS----PNQCTCSPGYVVINEASPNICEP----HCA----ECV-NGVCSA--P------NTCDCLDVL 132 (132)
Q Consensus 79 ~C~-nG~C~~----p~~C~C~~G~~G~~~c~~~~C~~----~C~----~C~-nG~C~~--p------~~C~C~~G~ 132 (132)
.|. |+.|.. ...|+|.+||.|.. ..|.+ .|. +|. |..|.. + -+|.|.+|+
T Consensus 11 ~C~~NA~C~r~~~g~e~C~C~~gy~gdg----~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 11 QCPQNSGCFRHLDEREECKCLLNYKQEG----DKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD 82 (99)
T ss_dssp CCCTTEEEECCTTSCCEEEECTTEEEET----TEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred CCCCCCCeEEcCCCCEEEEecCCeecCC----CeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence 455 788864 45799999999965 22332 343 465 677774 3 279998875
No 91
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=86.57 E-value=0.019 Score=44.96 Aligned_cols=14 Identities=14% Similarity=-0.071 Sum_probs=11.0
Q ss_pred CCceEeCCCceeCC
Q psy8484 56 THVRICCEGYEDDH 69 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~ 69 (132)
.+.|.|.+||+|..
T Consensus 52 ~y~C~Cp~Gf~G~~ 65 (267)
T 4fbr_A 52 TYNGEGPIGFRGTL 65 (267)
T ss_dssp EETTSCCEEEEEEE
T ss_pred CeEEeCCCCccccc
Confidence 46788999998863
No 92
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=85.96 E-value=0.56 Score=32.45 Aligned_cols=44 Identities=18% Similarity=0.433 Sum_probs=27.8
Q ss_pred CCceEeCCCceeCCCce-ecccC-CCCCC-c---EEcC----CCeEEccCCcee
Q psy8484 56 THVRICCEGYEDDHGSC-RPVCE-RECVF-G---SCTS----PNQCTCSPGYVV 99 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~~C-~~~C~-~~C~n-G---~C~~----p~~C~C~~G~~G 99 (132)
.+.|.|.+||+|....= +..|. .+|.| + .|+. ...|.|++||.+
T Consensus 67 ~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l 120 (142)
T 2c4f_L 67 SYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSL 120 (142)
T ss_dssp EEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEE
T ss_pred CEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceE
Confidence 35799999999874321 12221 12334 3 7863 457999999994
No 93
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=85.75 E-value=0.012 Score=46.09 Aligned_cols=23 Identities=9% Similarity=-0.023 Sum_probs=13.9
Q ss_pred CCCC-cEEcC---CCeEEccCCceecc
Q psy8484 79 ECVF-GSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 79 ~C~n-G~C~~---p~~C~C~~G~~G~~ 101 (132)
+|.| |+|+. ..+|+|++||+|..
T Consensus 106 pC~ngG~C~~~~~sy~C~C~~Gf~G~~ 132 (267)
T 4fbr_A 106 KSNDGGKTLTGTTTYNGEGPIGFKSEV 132 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEEEEEE
T ss_pred CCCCCCEEecCCccEEeeCCCCccccC
Confidence 5665 66652 34567777777654
No 94
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=85.32 E-value=0.24 Score=41.34 Aligned_cols=48 Identities=25% Similarity=0.621 Sum_probs=12.0
Q ss_pred CCceEeCCCceeCCC-ceec----------ccC-CCCCC-cE----EcC-CCeEEccCCceeccCCC
Q psy8484 56 THVRICCEGYEDDHG-SCRP----------VCE-RECVF-GS----CTS-PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 56 ~~~c~C~~Gy~~~~~-~C~~----------~C~-~~C~n-G~----C~~-p~~C~C~~G~~G~~~c~ 104 (132)
.+.|.|.+||.|... .|.+ .|. -+|.+ |. |.. .++|.|.+||.|.. |+
T Consensus 459 tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~-Ce 524 (525)
T 4aqs_A 459 TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQ-CN 524 (525)
T ss_dssp TCCBCBCTTCCSTTTCC--------------------------------------------------
T ss_pred CCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCC-CC
Confidence 456899999998753 2321 132 13443 43 432 35799999999986 54
No 95
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=84.56 E-value=0.66 Score=40.03 Aligned_cols=43 Identities=19% Similarity=0.662 Sum_probs=26.4
Q ss_pred CCeEEccCCceecc--CC-CCCccccCCCCCCCCEEcC---CCceeCCCCC
Q psy8484 88 PNQCTCSPGYVVIN--EA-SPNICEPHCAECVNGVCSA---PNTCDCLDVL 132 (132)
Q Consensus 88 p~~C~C~~G~~G~~--~c-~~~~C~~~C~~C~nG~C~~---p~~C~C~~G~ 132 (132)
...|.|.+||.+.+ .| ++++|... .+|. ..|++ .+.|.|.+||
T Consensus 314 ~~~C~C~~G~~~~~~~~C~dideC~~~-~~C~-~~C~n~~g~y~C~C~~G~ 362 (699)
T 1n7d_A 314 GYECLCPDGFQLVAQRRCEDIDECQDP-DTCS-QLCVNLEGGYKCQCEEGF 362 (699)
T ss_dssp CCCCCCCSSSCCCSSSCCCCCCCCSSS-SSCT-TTCCBCSSCBCCCCCSSC
T ss_pred CcEEeCCCCeEcCCCCcccCccccCCC-Cccc-cccccCCCCeeeeeeccc
Confidence 46799999999522 23 44555421 1343 24554 3689999997
No 96
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=81.90 E-value=1.5 Score=29.62 Aligned_cols=59 Identities=25% Similarity=0.580 Sum_probs=38.7
Q ss_pred ecCCcceeEEEEEeeeeeeecCCCceEeCCCceeCCCceecc---cC---CCCC-CcEEcCC--C--eEEccCCcee
Q psy8484 34 YHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPV---CE---RECV-FGSCTSP--N--QCTCSPGYVV 99 (132)
Q Consensus 34 ~~C~~~r~~~~~~~~~~~~~~~~~~c~C~~Gy~~~~~~C~~~---C~---~~C~-nG~C~~p--~--~C~C~~G~~G 99 (132)
..|+....++++..- +..|.|..||++.+..|++. |. .+|. |+.|... + .|.|..||.-
T Consensus 16 t~Cp~NA~C~r~~~G-------~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~ 85 (105)
T 1n1i_A 16 TNVPENAACYRYLDG-------TEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSE 85 (105)
T ss_dssp SCCCTTEEEEECTTS-------CEEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCC
T ss_pred CCCCCCCCeEECCCC-------CEeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCc
Confidence 357777777765432 33689999999998889765 21 1343 4566533 2 4888888643
No 97
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=81.61 E-value=0.86 Score=36.31 Aligned_cols=43 Identities=19% Similarity=0.675 Sum_probs=25.1
Q ss_pred CCeEEccCCceecc--CC-CCCccccCCCCCCCCEEcC---CCceeCCCCC
Q psy8484 88 PNQCTCSPGYVVIN--EA-SPNICEPHCAECVNGVCSA---PNTCDCLDVL 132 (132)
Q Consensus 88 p~~C~C~~G~~G~~--~c-~~~~C~~~C~~C~nG~C~~---p~~C~C~~G~ 132 (132)
...|.|++||.+.+ .| +.++|... .+|.+ .|++ .+.|.|.+||
T Consensus 20 ~y~C~C~~G~~~~~~~~C~dideC~~~-~~C~~-~C~n~~g~~~C~C~~g~ 68 (400)
T 3p5b_L 20 GYECLCPDGFQLVAQRRCEDIDECQDP-DTCSQ-LCVNLEGGYKCQCEEGF 68 (400)
T ss_dssp SEEEECCTTEEECSSSCEEECCCCSTT-SSCSS-CCBCCSSSCBCCCCTTC
T ss_pred CeEEECCCCCCcCCCCcccCchhhhcc-CCCCC-ccCCCccceeeeccccc
Confidence 46788888888422 12 33445311 14544 5665 3689998887
No 98
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=81.49 E-value=0.41 Score=33.20 Aligned_cols=26 Identities=27% Similarity=0.732 Sum_probs=20.3
Q ss_pred CCCCC-cEEcC---CCeEEccCCceeccCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~~G~~G~~~c~ 104 (132)
.+|.+ |+|+. ...|.|++||.|.. |+
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~G~~-Ce 154 (162)
T 1g1s_A 125 MSCSKQGECLETIGNYTCSCYPGFYGPE-CE 154 (162)
T ss_dssp TGGGGSEEEEECSSSEEEEECTTEESTT-SC
T ss_pred CCCCCCCEEecCCCCceEeCCCCCcCcc-cc
Confidence 46875 89974 45899999999986 54
No 99
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=81.28 E-value=0.64 Score=40.01 Aligned_cols=28 Identities=29% Similarity=0.736 Sum_probs=22.3
Q ss_pred CCCCCC-cEEcC----CCeEEcc-CCceeccCCCC
Q psy8484 77 ERECVF-GSCTS----PNQCTCS-PGYVVINEASP 105 (132)
Q Consensus 77 ~~~C~n-G~C~~----p~~C~C~-~G~~G~~~c~~ 105 (132)
..+|+| |+|+. ...|.|. +||.|.+ |+.
T Consensus 6 s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~-Ce~ 39 (587)
T 3nt1_A 6 SNPCQNRGECMSTGFDQYKCDCTRTGFYGEN-CTT 39 (587)
T ss_dssp TCCCCTTCEEEEEETTEEEEECTTSSEETTT-TCE
T ss_pred CCCCCCCCEeeCCCCCCeEEecCCCCccCCC-CCC
Confidence 368998 89983 3579999 9999997 653
No 100
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=80.25 E-value=0.95 Score=39.93 Aligned_cols=10 Identities=30% Similarity=1.169 Sum_probs=5.7
Q ss_pred eEEccCCcee
Q psy8484 90 QCTCSPGYVV 99 (132)
Q Consensus 90 ~C~C~~G~~G 99 (132)
.|.|++||.+
T Consensus 334 ~C~C~~Gy~l 343 (791)
T 3m0c_C 334 ECLCPDGFQL 343 (791)
T ss_dssp EEECCTTCEE
T ss_pred ccCCCCCCcc
Confidence 4555566555
No 101
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=80.04 E-value=0.61 Score=39.73 Aligned_cols=27 Identities=33% Similarity=0.733 Sum_probs=22.2
Q ss_pred CCCCC-cEEcC----CCeEEcc-CCceeccCCCC
Q psy8484 78 RECVF-GSCTS----PNQCTCS-PGYVVINEASP 105 (132)
Q Consensus 78 ~~C~n-G~C~~----p~~C~C~-~G~~G~~~c~~ 105 (132)
.+|+| |+|+. ...|.|. +||.|.+ |+.
T Consensus 8 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~-Ce~ 40 (553)
T 1q4g_A 8 YPCQHQGICVRFGLDRYQCDCTRTGYSGPN-CTI 40 (553)
T ss_dssp CCCCTTCEEEEETTTEEEEECTTSSEETTT-TCE
T ss_pred CCCCCCCCcCCCCCCceEeeCCCCCcCCCC-CCC
Confidence 58998 89986 3579999 9999997 653
No 102
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=74.56 E-value=0.93 Score=37.21 Aligned_cols=23 Identities=26% Similarity=0.602 Sum_probs=17.9
Q ss_pred ccCCC-CCC-CCEEcCCCceeCCCCC
Q psy8484 109 EPHCA-ECV-NGVCSAPNTCDCLDVL 132 (132)
Q Consensus 109 ~~~C~-~C~-nG~C~~p~~C~C~~G~ 132 (132)
++.|. .|. ||.|+. ++|.|.+||
T Consensus 191 g~~Cp~~CsGhG~C~~-g~C~Cd~G~ 215 (387)
T 2ddu_A 191 SEPCPSYCSGHGDCIS-GVCFCDLGY 215 (387)
T ss_dssp ESCCGGGGGGSEEEET-TEEEECTTE
T ss_pred cccCccccCCCceecC-CeEEecCCc
Confidence 34455 665 899987 999999997
No 103
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=74.49 E-value=1.3 Score=34.97 Aligned_cols=53 Identities=28% Similarity=0.628 Sum_probs=12.9
Q ss_pred cCCCCCCcEEcCCCeEEccCCce----eccCCCCCccccCCCCCCCCEEcC---CCceeCCCCC
Q psy8484 76 CERECVFGSCTSPNQCTCSPGYV----VINEASPNICEPHCAECVNGVCSA---PNTCDCLDVL 132 (132)
Q Consensus 76 C~~~C~nG~C~~p~~C~C~~G~~----G~~~c~~~~C~~~C~~C~nG~C~~---p~~C~C~~G~ 132 (132)
|...|.|. .....|.|++||. |...-+.++|... .+|.++ |++ .+.|.|.+||
T Consensus 13 c~~~C~~~--~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~-~~C~~~-C~~~~g~~~C~C~~g~ 72 (386)
T 3v65_B 13 CAQKCQMI--RGAVQCTCHTGYRLTEDGRTCQDVNECAEE-GYCSQG-CTNSEGAFQCWCEAGY 72 (386)
T ss_dssp ------------------------------------------CCTTE-EC-----CCEECCTTE
T ss_pred CCCCCcCC--CCCcEeECCCCceECCCCCccCccceeCCc-CcccCc-CCCCCCCCeEEECCCc
Confidence 44455542 1246799999998 5542234566411 167665 876 3699999987
No 104
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=69.31 E-value=5.9 Score=34.03 Aligned_cols=54 Identities=24% Similarity=0.408 Sum_probs=30.7
Q ss_pred CCCCCcEEcCC-----CeEEccCCceecc-CCCCCccccCCCCCCCCEEcC---CCceeCCCCC
Q psy8484 78 RECVFGSCTSP-----NQCTCSPGYVVIN-EASPNICEPHCAECVNGVCSA---PNTCDCLDVL 132 (132)
Q Consensus 78 ~~C~nG~C~~p-----~~C~C~~G~~G~~-~c~~~~C~~~C~~C~nG~C~~---p~~C~C~~G~ 132 (132)
..|.||.|+.. +.+.|..|..+.. +|+.+.|...=.+|. ..|++ .+.|.|++||
T Consensus 261 ~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~-~~C~~~~~~~~C~C~~G~ 323 (699)
T 1n7d_A 261 FKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCS-HVCNDLKIGYECLCPDGF 323 (699)
T ss_dssp CCCTTSCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSC-TTCCCCTTCCCCCCCSSS
T ss_pred eecCCCcEeCCcccccccceecCcccccccccccccccccccCcC-CCcccCCCCcEEeCCCCe
Confidence 36778888742 3456777665543 455555542200222 24554 3689999997
No 105
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=67.03 E-value=5.7 Score=26.27 Aligned_cols=41 Identities=22% Similarity=0.436 Sum_probs=29.1
Q ss_pred ecCCcceeEEEEEeeeeeeecCCCceEeCCCceeCCCceecccCCCCC
Q psy8484 34 YHCQKTRTAYSYKYKTEEYMEDTHVRICCEGYEDDHGSCRPVCERECV 81 (132)
Q Consensus 34 ~~C~~~r~~~~~~~~~~~~~~~~~~c~C~~Gy~~~~~~C~~~C~~~C~ 81 (132)
..||...++|+|... ...+.|..||+..+..|++.=...|.
T Consensus 10 tkcp~NA~Cyr~~dg-------~EecRCllnykk~~~kCV~~~~~~C~ 50 (95)
T 1b9w_A 10 TNVPENAACYRYLDG-------TEEWRCLLYFKEDAGKCVPAPNMTCK 50 (95)
T ss_dssp CCCCTTEEEEECTTS-------CEEEEECTTEEEETTEEEECTTCCTT
T ss_pred CCCCCCcCeEEEcCC-------CEEEEEECCeEecCCEEEcCCCCCcc
Confidence 368888888887643 34588999999988888654333454
No 106
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=65.43 E-value=6.8 Score=33.01 Aligned_cols=18 Identities=33% Similarity=0.768 Sum_probs=10.1
Q ss_pred cEEc-CCCeEEccCCceec
Q psy8484 83 GSCT-SPNQCTCSPGYVVI 100 (132)
Q Consensus 83 G~C~-~p~~C~C~~G~~G~ 100 (132)
|... ..++|.|.+||.+.
T Consensus 256 G~w~~p~G~C~C~~G~e~~ 274 (536)
T 3fl7_A 256 GEWLVPIGQCLCQAGYEKV 274 (536)
T ss_dssp SCBCCCBCCCEECTTEEEE
T ss_pred CCEecccCcEeccCccccC
Confidence 5443 23667777777643
No 107
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=64.18 E-value=3.3 Score=28.51 Aligned_cols=26 Identities=27% Similarity=0.721 Sum_probs=20.6
Q ss_pred CCCC-CcEEcC---CCeEEccCCceeccCCC
Q psy8484 78 RECV-FGSCTS---PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 78 ~~C~-nG~C~~---p~~C~C~~G~~G~~~c~ 104 (132)
..|. +|.|+. ...|.|.+||.|.. |+
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~-C~ 154 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGPQ-CQ 154 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSSS-SC
T ss_pred CcCCCCCeecccCCCceeeeCCCccccc-cc
Confidence 4688 599973 45899999999986 54
No 108
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=59.19 E-value=8.3 Score=21.45 Aligned_cols=22 Identities=32% Similarity=0.907 Sum_probs=15.2
Q ss_pred CCCCcEEcC---CCeEEccCCceecc
Q psy8484 79 ECVFGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 79 ~C~nG~C~~---p~~C~C~~G~~G~~ 101 (132)
+|. +.|++ ...|.|.+||.+..
T Consensus 21 ~C~-~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 21 QCQ-HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp TTS-SEEEEETTEEEEECSTTCEECT
T ss_pred CCC-CEeECCCCCeEEECCCCCeECC
Confidence 354 36753 35799999999854
No 109
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=58.09 E-value=2.9 Score=28.45 Aligned_cols=33 Identities=27% Similarity=0.862 Sum_probs=23.0
Q ss_pred ce-ecccC-CCCCC-cEEcC---CCeEEccCCceeccCCC
Q psy8484 71 SC-RPVCE-RECVF-GSCTS---PNQCTCSPGYVVINEAS 104 (132)
Q Consensus 71 ~C-~~~C~-~~C~n-G~C~~---p~~C~C~~G~~G~~~c~ 104 (132)
.| .+.|. .+|.+ |.|.+ ...|.|.+||.|.. |+
T Consensus 116 ICe~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~-Ce 154 (157)
T 1g1t_A 116 LCYTAACTNTSCSGHGECVETINNYTCKCDPGFSGLK-CE 154 (157)
T ss_dssp EEEECCCCTTGGGGSEEEEEETTEEEEEECTTEESTT-SC
T ss_pred EeCcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcc-cc
Confidence 44 34443 47774 89963 56799999999986 54
No 110
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=50.75 E-value=7.8 Score=32.65 Aligned_cols=25 Identities=20% Similarity=0.660 Sum_probs=21.4
Q ss_pred CCC-CcEEcCCCeEEccCCceeccCCC
Q psy8484 79 ECV-FGSCTSPNQCTCSPGYVVINEAS 104 (132)
Q Consensus 79 ~C~-nG~C~~p~~C~C~~G~~G~~~c~ 104 (132)
.|. ||.|-+...|.|.+||..++ |+
T Consensus 455 ~C~~~GVCNn~~~CHC~~GwaPP~-C~ 480 (510)
T 3g5c_A 455 ICSGNGVCSNELKCVCNRHWIGSD-CN 480 (510)
T ss_dssp SGGGTEEEBTTSCEEECTTEESTT-SC
T ss_pred ccCCCCeeCCCCCcCCCCCCCCCC-CC
Confidence 477 69999888999999999987 54
No 111
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=50.23 E-value=11 Score=19.75 Aligned_cols=11 Identities=36% Similarity=0.999 Sum_probs=4.6
Q ss_pred CcEEcCCCeEEc
Q psy8484 82 FGSCTSPNQCTC 93 (132)
Q Consensus 82 nG~C~~p~~C~C 93 (132)
+|.|++ +.|.|
T Consensus 19 ~gKC~N-gkC~C 29 (31)
T 1cmr_A 19 KGWCDH-RGCIC 29 (31)
T ss_dssp CCCEET-TEECC
T ss_pred CCceeC-CCcee
Confidence 344443 33443
No 112
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=48.15 E-value=6.2 Score=20.79 Aligned_cols=11 Identities=36% Similarity=0.770 Sum_probs=7.4
Q ss_pred ceEeCCCceeC
Q psy8484 58 VRICCEGYEDD 68 (132)
Q Consensus 58 ~c~C~~Gy~~~ 68 (132)
.|.|.+||...
T Consensus 6 GC~C~~G~vrn 16 (32)
T 3ssb_I 6 KCYCEDGYARD 16 (32)
T ss_dssp EEEECTTEEEC
T ss_pred CCCcCCCcEEC
Confidence 36777777664
No 113
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=47.21 E-value=10 Score=30.06 Aligned_cols=26 Identities=23% Similarity=0.496 Sum_probs=20.4
Q ss_pred CCCCC-cEEcC---CCeEEccC-CceeccCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCSP-GYVVINEAS 104 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~~-G~~G~~~c~ 104 (132)
.+|.| |.|+. ...|.|.. ||.|+. |+
T Consensus 191 ~pC~n~g~C~~~~~~~~C~C~~~~~~G~~-C~ 221 (410)
T 3asi_A 191 DSCSNQGVCLQQWDGFSCDCSMTSFSGPL-CN 221 (410)
T ss_dssp TSSSTTCEEEECSSSEEEECTTTSEESTT-SC
T ss_pred ccCCCCCEecCCCCCceEeccCCcccCCC-CC
Confidence 58987 89984 35799995 999986 54
No 114
>1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator}
Probab=41.34 E-value=7.2 Score=21.07 Aligned_cols=11 Identities=27% Similarity=0.957 Sum_probs=4.9
Q ss_pred CcEEcCCCeEEc
Q psy8484 82 FGSCTSPNQCTC 93 (132)
Q Consensus 82 nG~C~~p~~C~C 93 (132)
+|.|++ +.|.|
T Consensus 22 ~gKCmN-gkC~C 32 (35)
T 1wz5_A 22 NSKCIN-RMCKC 32 (35)
T ss_dssp CCEEET-TEEEC
T ss_pred CcceeC-Cccee
Confidence 444444 44444
No 115
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=41.31 E-value=9.1 Score=32.23 Aligned_cols=19 Identities=42% Similarity=0.802 Sum_probs=16.2
Q ss_pred CCC-CCEEcCCCceeCCCCC
Q psy8484 114 ECV-NGVCSAPNTCDCLDVL 132 (132)
Q Consensus 114 ~C~-nG~C~~p~~C~C~~G~ 132 (132)
.|. ||.|.+...|.|.+||
T Consensus 455 ~C~~~GVCNn~~~CHC~~Gw 474 (510)
T 3g5c_A 455 ICSGNGVCSNELKCVCNRHW 474 (510)
T ss_dssp SGGGTEEEBTTSCEEECTTE
T ss_pred ccCCCCeeCCCCCcCCCCCC
Confidence 355 7999888999999998
No 116
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=41.08 E-value=16 Score=30.41 Aligned_cols=24 Identities=33% Similarity=0.920 Sum_probs=13.9
Q ss_pred ceecccCCCCCCcEEcCCCeEEccC
Q psy8484 71 SCRPVCERECVFGSCTSPNQCTCSP 95 (132)
Q Consensus 71 ~C~~~C~~~C~nG~C~~p~~C~C~~ 95 (132)
.|+-+|...|.++.|..++.| |.+
T Consensus 187 ~CQ~~C~~~C~~~~c~~~~~C-Ch~ 210 (486)
T 2hr7_A 187 HCQKVCPTICKSHGCTAEGLC-CHS 210 (486)
T ss_dssp EECCCCCGGGTTSCBCTTCCB-CCT
T ss_pred hhhCcccccCCCCCCcCCCCc-cCc
Confidence 455566666666666665665 543
No 117
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=38.09 E-value=13 Score=29.14 Aligned_cols=19 Identities=16% Similarity=0.403 Sum_probs=10.3
Q ss_pred CceEeCCCceeCCCceecc
Q psy8484 57 HVRICCEGYEDDHGSCRPV 75 (132)
Q Consensus 57 ~~c~C~~Gy~~~~~~C~~~ 75 (132)
+.|.|.+||.|.+..|.++
T Consensus 28 y~C~C~~Gy~GnG~~C~d~ 46 (285)
T 1gl4_A 28 FCCRCVANYTGNGRQCVAE 46 (285)
T ss_dssp EEEEECTTEEECSSSEEET
T ss_pred eEEEcCCCCCCCCCcCCCC
Confidence 4455666666555555443
No 118
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=36.96 E-value=16 Score=28.64 Aligned_cols=24 Identities=21% Similarity=0.594 Sum_probs=18.8
Q ss_pred CCCC-CcEEcC---CCeEEccCCceecc
Q psy8484 78 RECV-FGSCTS---PNQCTCSPGYVVIN 101 (132)
Q Consensus 78 ~~C~-nG~C~~---p~~C~C~~G~~G~~ 101 (132)
.+|. |+.|++ ...|.|.+||.|..
T Consensus 13 ~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG 40 (285)
T 1gl4_A 13 HQCSVHAECRDYATGFCCRCVANYTGNG 40 (285)
T ss_dssp GGSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred CCCCCCCEeEcCCCCeEEEcCCCCCCCC
Confidence 4676 688973 46899999999865
No 119
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D
Probab=36.66 E-value=71 Score=22.71 Aligned_cols=55 Identities=25% Similarity=0.583 Sum_probs=34.1
Q ss_pred cCCCceEeCCCceeCCCceecccCCCCCCcEEc-------CCCeEE-ccCCceeccCCCCCcccc
Q psy8484 54 EDTHVRICCEGYEDDHGSCRPVCERECVFGSCT-------SPNQCT-CSPGYVVINEASPNICEP 110 (132)
Q Consensus 54 ~~~~~c~C~~Gy~~~~~~C~~~C~~~C~nG~C~-------~p~~C~-C~~G~~G~~~c~~~~C~~ 110 (132)
....+|.|.+||.-....|++. ..|..|.-+ ..-.|. |++|+..........|.+
T Consensus 81 tsdtvC~C~~G~~~~~~~C~~~--s~C~pG~~v~~~~t~~~Dt~C~~C~~GtFs~~~s~~~~C~p 143 (176)
T 3k51_B 81 THNRACRCRTGFFAHAGFCLEH--ASCPPGAGVIAPGTPSQNTQCQPCPPGTFSASSSSSEQCQP 143 (176)
T ss_dssp TBCCEEEECTTEEEETTEEEEC--CCCCTTEEEEECCCSSSCCEEEECCTTEECCSCSSSCCCEE
T ss_pred CCCceeeccCCeeECCCccccc--ccCCCCcEEeecCcccCCCccccCCCCcccCCCCCCCcccC
Confidence 3456799999998776667653 467765543 224686 999977654222344544
No 120
>1r1g_A Neurotoxin BMK37, BMBKTTX1; siras from S atoms, scorpion toxin, reductive dimethylation; HET: MLY; 1.72A {Synthetic} SCOP: g.3.7.2 PDB: 1q2k_A 3e8y_X
Probab=34.00 E-value=2.1 Score=22.62 Aligned_cols=11 Identities=36% Similarity=1.105 Sum_probs=5.3
Q ss_pred CcEEcCCCeEEc
Q psy8484 82 FGSCTSPNQCTC 93 (132)
Q Consensus 82 nG~C~~p~~C~C 93 (132)
+|.|++ +.|.|
T Consensus 19 ~gKC~N-gkC~C 29 (31)
T 1r1g_A 19 SGXCIN-SXCXC 29 (31)
T ss_dssp EEEEET-TEEEE
T ss_pred CccccC-CCccc
Confidence 455554 44444
No 121
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=33.19 E-value=21 Score=28.82 Aligned_cols=13 Identities=15% Similarity=0.460 Sum_probs=10.2
Q ss_pred CeEEccCCceecc
Q psy8484 89 NQCTCSPGYVVIN 101 (132)
Q Consensus 89 ~~C~C~~G~~G~~ 101 (132)
..|.|.+||.|.+
T Consensus 272 ~~C~C~~nt~G~~ 284 (375)
T 4aqt_A 272 LMCNCKHNTYGVD 284 (375)
T ss_dssp EEECCCTTEESTT
T ss_pred eeeeCcCCCcCCC
Confidence 3578888888876
No 122
>1pjv_A Cobatoxin 1, COTX1, GTIX; scorpion toxin, centuroides noxius, K+ channel, chemical synthesis, 3-D structure, 1H-spectroscopy, circular dichroism; NMR {Synthetic} SCOP: g.3.7.2
Probab=30.72 E-value=2.5 Score=22.49 Aligned_cols=11 Identities=45% Similarity=1.283 Sum_probs=5.0
Q ss_pred CcEEcCCCeEEc
Q psy8484 82 FGSCTSPNQCTC 93 (132)
Q Consensus 82 nG~C~~p~~C~C 93 (132)
+|.|++ +.|.|
T Consensus 19 ~GKCiN-~kC~C 29 (32)
T 1pjv_A 19 SGKCIN-NACKC 29 (32)
T ss_dssp EEEEET-TEEEE
T ss_pred CceEeC-CccEe
Confidence 344544 44444
No 123
>2ddl_A Leiurotoxin, LEI4P; scorpion toxin analog; NMR {Synthetic}
Probab=30.65 E-value=3.7 Score=22.01 Aligned_cols=14 Identities=36% Similarity=1.198 Sum_probs=7.2
Q ss_pred CCCCCEEcCCCceeC
Q psy8484 114 ECVNGVCSAPNTCDC 128 (132)
Q Consensus 114 ~C~nG~C~~p~~C~C 128 (132)
++.+|.|++ +.|.|
T Consensus 17 G~~~gKCiN-~kC~C 30 (33)
T 2ddl_A 17 GCLLGKCIG-DKCKC 30 (33)
T ss_dssp CCSCEEECS-SCEEE
T ss_pred CCCCceEeC-CCcEe
Confidence 445566654 44544
No 124
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=29.78 E-value=22 Score=32.66 Aligned_cols=26 Identities=23% Similarity=0.528 Sum_probs=20.6
Q ss_pred CCCCC-cEEcC---CCeEEcc-CCceeccCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCS-PGYVVINEAS 104 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~-~G~~G~~~c~ 104 (132)
.+|.| |+|+. ...|.|+ +||.|.. |+
T Consensus 1023 ~pC~ngG~C~~~~~~~~C~C~~~g~~G~~-C~ 1053 (1245)
T 3qcw_A 1023 DSCSNQGVCLQQWDGFSCDCSMTSFSGPL-CN 1053 (1245)
T ss_dssp TSSSSSCEEEEETTEEEEECTTSSCBSTT-SC
T ss_pred CcCCCCCEeCCCCCCCEEECCCCCCCCCC-cc
Confidence 58987 89973 3579999 6999987 54
No 125
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=27.91 E-value=23 Score=17.86 Aligned_cols=13 Identities=31% Similarity=0.910 Sum_probs=8.0
Q ss_pred CCcEEcCCCeEEcc
Q psy8484 81 VFGSCTSPNQCTCS 94 (132)
Q Consensus 81 ~nG~C~~p~~C~C~ 94 (132)
.+|.|++ +.|.|-
T Consensus 11 ~~gKCmN-gkC~Cy 23 (26)
T 1jlz_A 11 GSGKCIN-GRCKCY 23 (26)
T ss_dssp SSEEEET-TEEEEC
T ss_pred CCCEEeC-CCceee
Confidence 3567766 666664
No 126
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=27.29 E-value=26 Score=28.65 Aligned_cols=12 Identities=25% Similarity=0.473 Sum_probs=6.7
Q ss_pred eEEccCCceecc
Q psy8484 90 QCTCSPGYVVIN 101 (132)
Q Consensus 90 ~C~C~~G~~G~~ 101 (132)
+|.|..++.|.+
T Consensus 287 ~C~C~hnT~G~~ 298 (403)
T 2y38_A 287 QCACQHNTCGGS 298 (403)
T ss_dssp EECCCTTEESSS
T ss_pred EeECcCcCcCCC
Confidence 355555555554
No 127
>1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A*
Probab=26.91 E-value=12 Score=20.39 Aligned_cols=13 Identities=23% Similarity=0.652 Sum_probs=5.8
Q ss_pred CCCCEEcCCCceeC
Q psy8484 115 CVNGVCSAPNTCDC 128 (132)
Q Consensus 115 C~nG~C~~p~~C~C 128 (132)
+.+|.|++ +.|.|
T Consensus 23 ~~~gKCmN-gkC~C 35 (37)
T 1bah_A 23 TSRGKCMN-KKXRC 35 (37)
T ss_dssp CSCCCBCS-SSBCC
T ss_pred CCCcceeC-CCCCc
Confidence 34455543 34444
No 128
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=26.64 E-value=35 Score=31.32 Aligned_cols=26 Identities=31% Similarity=0.732 Sum_probs=20.7
Q ss_pred CCCCC-cEEcC---CCeEEcc-CCceeccCCC
Q psy8484 78 RECVF-GSCTS---PNQCTCS-PGYVVINEAS 104 (132)
Q Consensus 78 ~~C~n-G~C~~---p~~C~C~-~G~~G~~~c~ 104 (132)
.+|.| |.|+. ...|.|+ .||.|.. |+
T Consensus 625 ~pC~ngg~C~~~~~~~~C~C~~~g~~G~~-C~ 655 (1245)
T 3qcw_A 625 NPCKNNGMCRDGWNRYVCDCSGTGYLGRS-CE 655 (1245)
T ss_dssp CCCCTTCEEEECSSSEEEECTTTTEESTT-SC
T ss_pred cCCCCCCEEeCCCCCeEEECCCCCccccc-Cc
Confidence 58997 89984 3579999 7999987 54
No 129
>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R
Probab=26.50 E-value=1.1e+02 Score=21.52 Aligned_cols=55 Identities=24% Similarity=0.408 Sum_probs=33.1
Q ss_pred cCCCceEeCCCceeCCCceecccCCCCCCcEEc-------CCCeEE-ccCCceeccCCCCCcccc
Q psy8484 54 EDTHVRICCEGYEDDHGSCRPVCERECVFGSCT-------SPNQCT-CSPGYVVINEASPNICEP 110 (132)
Q Consensus 54 ~~~~~c~C~~Gy~~~~~~C~~~C~~~C~nG~C~-------~p~~C~-C~~G~~G~~~c~~~~C~~ 110 (132)
....+|.|.+||.-....|++. ..|..|.-+ ..-.|. |++|+..........|.+
T Consensus 79 tsdtvC~C~~G~~~~~~~C~~c--t~C~~G~~v~~~~t~~~dt~C~~C~~Gtfs~~~ss~~~C~p 141 (171)
T 3urf_Z 79 THNRVCECKEGRYLEIEFCLKH--RSCPPGFGVVQAGTPERNTVCKRCPDGFFSNETSSKAPCRK 141 (171)
T ss_dssp SSCCEEEECTTEEEETTEEEEC--CCBCTTEEEEECCCSSSCCEEEECCTTEECSSCBSSCCCEE
T ss_pred CCCccccCCCCcEECCccCccc--CcCCCCceEeecCccCCCcccccCCCCcccCCCCCCCcccc
Confidence 3456799999998765566652 356655433 123586 999986654212334544
No 130
>1wmt_A ISTX; neurotoxin, potassium channel blocker, solution structure, alpha-K toxin family, scorpion toxin; NMR {Synthetic} SCOP: g.3.7.2
Probab=25.83 E-value=31 Score=19.15 Aligned_cols=23 Identities=30% Similarity=0.935 Sum_probs=14.2
Q ss_pred eecccC--CCCCCcEEcCCCeEEccC
Q psy8484 72 CRPVCE--RECVFGSCTSPNQCTCSP 95 (132)
Q Consensus 72 C~~~C~--~~C~nG~C~~p~~C~C~~ 95 (132)
|.+.|. .++.+|.|++ +.|.|-+
T Consensus 13 C~~~Ck~~~G~~~gKCmN-gkC~Cy~ 37 (41)
T 1wmt_A 13 CYEPCEKKYNCARAKCMN-RHCNCYN 37 (41)
T ss_dssp HHHHHHHTTSCCCCEEET-TEEECCC
T ss_pred HHHHHHHHhCCCCCceeC-CCcccCC
Confidence 444552 3456788887 7777754
No 131
>1tsk_A TS KAPA; scorpion, toxin, potassium channel, neurotoxin; NMR {Tityus serrulatus} SCOP: g.3.7.2
Probab=23.01 E-value=18 Score=19.42 Aligned_cols=7 Identities=29% Similarity=0.866 Sum_probs=3.0
Q ss_pred CCCEEcC
Q psy8484 116 VNGVCSA 122 (132)
Q Consensus 116 ~nG~C~~ 122 (132)
.+|.|++
T Consensus 24 ~~gKCmN 30 (35)
T 1tsk_A 24 ATGKCTN 30 (35)
T ss_dssp SCCEEET
T ss_pred CCCceeC
Confidence 3444443
No 132
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=22.79 E-value=42 Score=20.77 Aligned_cols=10 Identities=30% Similarity=1.026 Sum_probs=4.7
Q ss_pred eEEccCCcee
Q psy8484 90 QCTCSPGYVV 99 (132)
Q Consensus 90 ~C~C~~G~~G 99 (132)
.|.|.+||.-
T Consensus 48 GC~C~~G~vr 57 (78)
T 2p3f_N 48 ACVCKDGFYR 57 (78)
T ss_dssp EEEECSSCEE
T ss_pred CcCcCCCEeE
Confidence 3455555443
No 133
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=22.01 E-value=29 Score=29.00 Aligned_cols=22 Identities=27% Similarity=0.735 Sum_probs=12.8
Q ss_pred CCC--CcEEcCCCeEEccCCceecc
Q psy8484 79 ECV--FGSCTSPNQCTCSPGYVVIN 101 (132)
Q Consensus 79 ~C~--nG~C~~p~~C~C~~G~~G~~ 101 (132)
.|. ||.-. =+.|.|.+||.|..
T Consensus 447 ~C~~g~G~~~-CG~C~C~~G~~G~~ 470 (472)
T 3t3p_B 447 RCNNGNGTFE-CGVCRCGPGWLGSQ 470 (472)
T ss_dssp TTTTTTEEEE-TTEEEECTTC----
T ss_pred ccCCCCeeEe-CCceECcCCCCCCC
Confidence 464 46433 28899999999986
No 134
>1c49_A Toxin K-beta; scorpion toxin, potassium channels blockers, alpha-K toxin family, neurotoxin, solution structure; NMR {Pandinus imperator} SCOP: g.3.7.2 PDB: 2pta_A
Probab=20.24 E-value=36 Score=18.20 Aligned_cols=22 Identities=27% Similarity=0.850 Sum_probs=13.2
Q ss_pred eecccC--CCCCCcEEcCCCeEEcc
Q psy8484 72 CRPVCE--RECVFGSCTSPNQCTCS 94 (132)
Q Consensus 72 C~~~C~--~~C~nG~C~~p~~C~C~ 94 (132)
|.++|. .+..+|.|++ +.|.|-
T Consensus 10 C~~~Ck~~~G~~~gKCmN-gkC~Cy 33 (35)
T 1c49_A 10 CYPHCKKETGYPNAKCMN-RKCKCF 33 (35)
T ss_dssp GHHHHHHHTSCCCEEEET-TEEEET
T ss_pred HHHHHHHHhCCCCCceeC-CCcccc
Confidence 444552 2455778876 677763
Done!