Query psy8491
Match_columns 273
No_of_seqs 215 out of 1559
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 20:14:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8491.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8491hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.7 1.6E-17 5.4E-22 153.0 8.7 144 45-203 149-311 (324)
2 2vj2_A Jagged-1; signalling, p 99.6 5E-16 1.7E-20 130.1 6.0 143 22-200 12-169 (169)
3 2ygq_A WIF-1, WNT inhibitory f 99.5 4.9E-15 1.7E-19 136.3 7.3 128 26-165 164-308 (324)
4 2vj2_A Jagged-1; signalling, p 99.2 1.8E-11 6.1E-16 102.2 7.4 114 26-164 49-168 (169)
5 2gy5_A Angiopoietin-1 receptor 99.2 7.3E-11 2.5E-15 112.1 10.8 123 60-201 185-321 (423)
6 3fcs_B Integrin beta-3; beta p 99.1 2.3E-10 7.8E-15 114.6 11.9 136 20-193 448-623 (690)
7 1z1y_A Ookinete surface protei 99.0 3.2E-11 1.1E-15 101.8 1.5 128 49-200 11-175 (186)
8 2gy5_A Angiopoietin-1 receptor 99.0 4.3E-10 1.5E-14 106.9 8.8 141 28-201 186-351 (423)
9 1z1y_A Ookinete surface protei 98.9 2.7E-10 9.3E-15 96.1 3.3 125 19-164 17-174 (186)
10 3fcs_B Integrin beta-3; beta p 98.9 2.9E-09 1E-13 106.6 10.1 114 53-200 452-600 (690)
11 3k6s_B Integrin beta-2; cell r 98.8 1E-08 3.5E-13 102.5 9.2 137 26-201 445-624 (687)
12 3k6s_B Integrin beta-2; cell r 98.8 3.4E-09 1.2E-13 106.0 4.3 120 49-200 435-592 (687)
13 2vj3_A Neurogenic locus notch 98.7 2.7E-08 9.1E-13 79.6 6.7 83 18-103 19-115 (135)
14 4d90_A EGF-like repeat and dis 98.6 9.5E-08 3.3E-12 76.6 7.3 84 18-104 12-130 (143)
15 1dx5_I Thrombomodulin; serine 98.6 2.8E-08 9.4E-13 78.0 3.2 93 9-103 5-111 (118)
16 2bou_A EGF-like module contain 98.6 8.4E-08 2.9E-12 77.3 6.1 58 46-103 4-79 (143)
17 2vj3_A Neurogenic locus notch 98.5 2.6E-07 9.1E-12 73.8 7.2 92 49-164 13-118 (135)
18 4d90_A EGF-like repeat and dis 98.5 3.4E-07 1.2E-11 73.3 7.7 46 153-201 83-134 (143)
19 4fbr_A Lectin, myxobacterial h 98.3 1.2E-09 4.1E-14 97.5 -11.0 77 81-164 105-201 (267)
20 1uzk_A Fibrillin-1; glycoprote 98.3 1.1E-07 3.6E-12 78.3 0.6 42 153-194 103-155 (162)
21 2bou_A EGF-like module contain 98.2 8.7E-07 3E-11 71.2 4.5 83 27-109 19-136 (143)
22 2wg3_C Hedgehog-interacting pr 98.2 2E-07 7E-12 89.3 0.6 72 27-103 377-451 (463)
23 2w86_A Fibrillin-1, fibrillin1 98.2 2.7E-07 9.2E-12 74.7 0.7 97 9-105 5-142 (147)
24 2p28_B Integrin beta-2; hybrid 98.0 3.7E-06 1.3E-10 72.8 4.3 46 153-201 157-215 (217)
25 2wg3_C Hedgehog-interacting pr 97.9 1.8E-06 6.2E-11 82.7 1.3 73 62-164 379-454 (463)
26 1uzk_A Fibrillin-1; glycoprote 97.9 1.5E-06 5E-11 71.4 -0.1 110 18-137 15-151 (162)
27 2p28_B Integrin beta-2; hybrid 97.9 1.3E-05 4.6E-10 69.3 5.4 72 26-103 106-210 (217)
28 1emn_A Fibrillin; extracellula 97.9 1.5E-05 5.1E-10 58.2 4.9 54 49-103 12-76 (82)
29 1tpg_A T-plasminogen activator 97.8 7.3E-06 2.5E-10 61.2 2.8 68 26-103 1-82 (91)
30 1tpg_A T-plasminogen activator 97.8 9.4E-06 3.2E-10 60.6 2.8 60 59-127 1-64 (91)
31 1emn_A Fibrillin; extracellula 97.8 1.8E-05 6.2E-10 57.7 3.8 67 9-76 6-81 (82)
32 1klo_A Laminin; glycoprotein; 97.8 3.9E-05 1.3E-09 63.2 6.2 46 153-200 91-146 (162)
33 4fbr_A Lectin, myxobacterial h 97.7 7.3E-08 2.5E-12 85.9 -11.5 164 21-201 7-203 (267)
34 1aut_L Activated protein C; se 97.7 4.2E-05 1.4E-09 59.2 5.4 74 48-127 19-108 (114)
35 4aqs_A Laminin subunit beta-1; 97.7 6.6E-05 2.3E-09 72.7 7.7 24 23-46 275-298 (525)
36 1yo8_A Thrombospondin-2; EGF, 97.7 2.9E-05 9.8E-10 77.0 5.1 98 81-200 9-146 (634)
37 1dx5_I Thrombomodulin; serine 97.6 8.7E-06 3E-10 63.5 0.5 51 50-102 11-71 (118)
38 1lmj_A Fibrillin 1; EGF, calci 97.5 4.7E-05 1.6E-09 55.9 3.3 53 51-103 13-79 (86)
39 1yo8_A Thrombospondin-2; EGF, 97.5 0.00012 4.1E-09 72.5 6.0 93 10-103 5-140 (634)
40 2w86_A Fibrillin-1, fibrillin1 97.4 4.9E-05 1.7E-09 61.2 2.4 22 49-70 10-34 (147)
41 1lmj_A Fibrillin 1; EGF, calci 97.4 8.3E-05 2.8E-09 54.5 2.7 55 16-70 13-78 (86)
42 2w2n_E LDL receptor, low-densi 97.2 9.5E-05 3.2E-09 56.8 1.8 11 93-103 90-100 (107)
43 1klo_A Laminin; glycoprotein; 97.1 0.0004 1.4E-08 57.1 4.7 17 25-41 16-33 (162)
44 1x7a_L Coagulation factor IX, 97.1 0.00058 2E-08 55.1 5.2 59 49-111 54-126 (146)
45 1aut_L Activated protein C; se 97.0 0.00064 2.2E-08 52.4 4.6 57 18-78 26-94 (114)
46 2vh0_B Activated factor XA lig 96.6 0.00075 2.6E-08 53.6 2.0 66 49-118 48-128 (134)
47 1nfu_B Coagulation factor XA, 96.6 0.00073 2.5E-08 57.4 2.0 67 49-119 48-129 (195)
48 1x7a_L Coagulation factor IX, 96.5 0.0016 5.6E-08 52.5 3.8 66 9-78 49-126 (146)
49 3u7u_G Neuregulin 1; signaling 96.5 0.0016 5.5E-08 44.0 2.7 31 169-201 9-50 (55)
50 4aqs_A Laminin subunit beta-1; 96.4 0.0049 1.7E-07 59.5 6.7 46 153-200 422-475 (525)
51 1z6c_A Vitamin K-dependent pro 96.4 0.004 1.4E-07 45.5 4.6 11 60-70 25-35 (87)
52 1z6c_A Vitamin K-dependent pro 96.4 0.0038 1.3E-07 45.6 4.5 52 17-70 15-73 (87)
53 2w2n_E LDL receptor, low-densi 96.3 0.0015 5.3E-08 49.9 2.2 54 16-70 39-99 (107)
54 1nfu_B Coagulation factor XA, 96.2 0.0014 4.8E-08 55.6 1.8 73 9-85 43-129 (195)
55 3p5b_L Low density lipoprotein 96.2 0.0039 1.3E-07 57.9 4.9 62 15-77 9-78 (400)
56 2c4f_L Coagulation factor VII 96.0 0.0061 2.1E-07 48.6 4.6 59 49-110 53-128 (142)
57 3h5c_B Vitamin K-dependent pro 96.0 0.0074 2.5E-07 54.0 5.6 68 9-77 6-83 (317)
58 2ygo_A WIF-1, WNT inhibitory f 96.0 0.004 1.4E-07 52.3 3.4 32 169-202 149-182 (188)
59 3h5c_B Vitamin K-dependent pro 96.0 0.0057 1.9E-07 54.8 4.6 58 49-110 11-83 (317)
60 1n7d_A LDL receptor, low-densi 95.9 0.019 6.5E-07 57.3 8.5 136 51-200 183-373 (699)
61 2ygo_A WIF-1, WNT inhibitory f 95.9 0.0051 1.8E-07 51.7 3.5 26 45-70 149-175 (188)
62 1k36_A Epiregulin; EGF-like fo 95.9 0.0027 9.4E-08 41.1 1.4 27 173-201 13-44 (46)
63 2vh0_B Activated factor XA lig 95.9 0.0028 9.7E-08 50.2 1.8 65 10-78 44-121 (134)
64 1edm_B Factor IX; epidermal gr 95.8 0.0053 1.8E-07 37.8 2.6 26 173-200 10-39 (39)
65 2c4f_L Coagulation factor VII 95.7 0.0067 2.3E-07 48.4 3.6 66 9-77 48-128 (142)
66 1a3p_A Epidermal growth factor 95.5 0.0058 2E-07 39.1 2.1 27 173-201 10-42 (45)
67 3ca7_A Protein spitz; argos, E 95.3 0.0016 5.4E-08 43.2 -1.2 33 27-70 3-43 (52)
68 3v65_B Low-density lipoprotein 95.2 0.0068 2.3E-07 55.8 2.1 68 9-77 4-82 (386)
69 3zyj_B Netrin-G1; cell adhesio 95.0 0.0084 2.9E-07 56.6 2.1 77 24-103 310-394 (426)
70 1egf_A Epidermal growth factor 94.9 0.014 4.9E-07 38.6 2.5 28 173-202 13-46 (53)
71 1hae_A Heregulin-alpha; growth 94.3 0.022 7.5E-07 39.0 2.3 27 173-201 13-48 (63)
72 3p5b_L Low density lipoprotein 94.1 0.038 1.3E-06 51.1 4.4 56 53-109 11-77 (400)
73 3ca7_A Protein spitz; argos, E 94.1 0.016 5.6E-07 38.2 1.3 36 153-201 6-49 (52)
74 3m0c_C LDL receptor, low-densi 93.7 0.032 1.1E-06 56.7 3.1 61 16-77 322-390 (791)
75 1nql_B Epidermal growth factor 93.6 0.019 6.6E-07 38.1 1.0 27 173-201 13-45 (53)
76 3ltf_D Protein spitz; receptor 93.6 0.029 9.8E-07 38.0 1.8 31 173-205 15-53 (58)
77 1k36_A Epiregulin; EGF-like fo 93.5 0.037 1.3E-06 35.6 2.1 22 49-70 12-38 (46)
78 1n7d_A LDL receptor, low-densi 93.1 0.06 2.1E-06 53.6 4.0 52 18-70 306-364 (699)
79 3e50_C Protransforming growth 93.1 0.052 1.8E-06 35.7 2.4 27 173-201 15-46 (50)
80 3u7u_G Neuregulin 1; signaling 92.7 0.064 2.2E-06 36.0 2.5 26 49-77 14-48 (55)
81 1edm_B Factor IX; epidermal gr 92.6 0.055 1.9E-06 33.0 1.9 22 49-70 9-34 (39)
82 1a3p_A Epidermal growth factor 92.5 0.099 3.4E-06 33.1 3.1 21 50-70 10-36 (45)
83 1apq_A Complement protease C1R 92.0 0.065 2.2E-06 34.8 1.8 24 15-38 21-44 (53)
84 2rnl_A Amphiregulin; AR, color 91.7 0.094 3.2E-06 34.5 2.2 33 166-200 11-49 (50)
85 2jkh_L Factor X light chain; p 91.1 0.11 3.7E-06 34.5 2.2 32 15-46 10-42 (55)
86 3zyj_B Netrin-G1; cell adhesio 91.1 0.081 2.8E-06 49.9 2.1 17 54-70 304-323 (426)
87 2k2s_B Micronemal protein 6; m 91.1 0.093 3.2E-06 35.9 1.9 26 173-200 18-50 (61)
88 1iox_A Betacellulin; EGF-like 90.8 0.073 2.5E-06 35.0 1.0 27 173-201 15-46 (50)
89 1egf_A Epidermal growth factor 90.1 0.27 9.3E-06 32.2 3.4 25 50-77 13-43 (53)
90 1nql_B Epidermal growth factor 89.9 0.13 4.3E-06 34.1 1.6 27 48-77 11-43 (53)
91 2e26_A Reelin, reeler protein; 89.9 0.071 2.4E-06 53.3 0.5 39 30-70 521-560 (725)
92 1kig_L Factor XA; glycoprotein 89.3 0.12 4.1E-06 33.8 1.2 36 16-51 8-44 (51)
93 3v65_B Low-density lipoprotein 89.0 0.15 5.2E-06 46.6 2.0 55 55-110 16-82 (386)
94 1hae_A Heregulin-alpha; growth 88.9 0.19 6.5E-06 34.1 2.0 26 49-77 12-46 (63)
95 1xdt_R Hbegf, heparin-binding 88.7 0.29 9.9E-06 35.3 2.9 26 173-200 47-77 (79)
96 1kli_L Factor VIIA; extrinsic 88.5 0.27 9.1E-06 34.3 2.6 40 7-46 4-47 (69)
97 2wph_E Coagulation factor IXA 88.0 0.32 1.1E-05 32.8 2.7 37 15-51 8-46 (59)
98 2k2s_B Micronemal protein 6; m 85.9 0.26 8.9E-06 33.6 1.2 22 49-70 17-45 (61)
99 2bz6_L Blood coagulation facto 85.4 0.34 1.2E-05 31.8 1.6 31 16-46 9-41 (53)
100 2e26_A Reelin, reeler protein; 83.2 0.29 1E-05 48.9 0.7 44 153-201 521-566 (725)
101 1ob1_C Major merozoite surface 83.1 1.3 4.4E-05 33.2 4.1 50 51-101 12-83 (99)
102 3e50_C Protransforming growth 82.4 0.76 2.6E-05 30.0 2.3 26 49-77 14-44 (50)
103 3m0c_C LDL receptor, low-densi 80.7 0.95 3.3E-05 45.8 3.4 54 55-109 325-389 (791)
104 1xdt_R Hbegf, heparin-binding 79.8 1.3 4.4E-05 31.8 2.9 27 48-77 45-76 (79)
105 1n1i_A Merozoite surface prote 79.8 1.4 4.9E-05 33.2 3.3 50 51-101 18-84 (105)
106 2fd6_A Urokinase-type plasmino 79.7 0.76 2.6E-05 35.5 1.8 28 173-202 2-36 (122)
107 2p26_A Integrin beta-2; hybrid 79.4 1.2 4E-05 39.6 3.2 47 51-102 198-264 (280)
108 4aqt_A Laminin subunit gamma-1 79.3 1.1 3.8E-05 41.4 3.2 25 22-46 267-291 (375)
109 3ltf_D Protein spitz; receptor 78.4 0.9 3.1E-05 30.4 1.7 25 50-77 15-47 (58)
110 3nt1_A Prostaglandin-endoperox 77.7 0.92 3.1E-05 44.4 2.2 28 173-202 8-41 (587)
111 1g1s_A P-selectin; selectin, l 77.5 0.68 2.3E-05 36.7 1.0 27 173-201 126-156 (162)
112 2rnl_A Amphiregulin; AR, color 77.5 1.1 3.8E-05 29.2 1.8 22 49-70 18-44 (50)
113 1g1s_A P-selectin; selectin, l 76.3 0.74 2.5E-05 36.5 0.9 18 86-103 131-151 (162)
114 1ob1_C Major merozoite surface 76.0 1.7 5.9E-05 32.5 2.8 48 22-70 21-84 (99)
115 4aqt_A Laminin subunit gamma-1 75.6 0.9 3.1E-05 42.0 1.4 11 60-70 272-282 (375)
116 1gl4_A Nidogen-1, entactin; im 72.5 0.92 3.2E-05 40.4 0.6 30 173-202 14-47 (285)
117 1q4g_A Prostaglandin G/H synth 72.2 0.97 3.3E-05 43.9 0.7 28 173-202 9-42 (553)
118 1n1i_A Merozoite surface prote 71.7 4.9 0.00017 30.3 4.3 47 22-70 27-85 (105)
119 2p26_A Integrin beta-2; hybrid 70.2 3.1 0.0001 36.9 3.5 43 26-70 206-264 (280)
120 2i9a_A Urokinase-type plasmino 70.1 2.2 7.7E-05 33.9 2.3 28 173-202 14-48 (145)
121 2kl7_A Fibulin-4; secreted, ca 69.3 2.3 8E-05 29.5 2.0 53 18-77 17-70 (71)
122 2fd6_A Urokinase-type plasmino 65.3 3.4 0.00011 31.7 2.4 42 153-200 22-63 (122)
123 2ddu_A Reelin; beta-jelly-roll 59.9 2.8 9.6E-05 38.8 1.2 24 46-70 193-217 (387)
124 3cfw_A L-selectin; EGF, cell a 59.4 3.1 0.00011 32.8 1.3 11 93-103 141-151 (164)
125 2ddu_A Reelin; beta-jelly-roll 58.4 3.5 0.00012 38.2 1.6 22 81-103 196-218 (387)
126 1gl4_A Nidogen-1, entactin; im 57.8 3.4 0.00012 36.7 1.3 29 50-79 14-46 (285)
127 1g1t_A E-selectin; EGF, adhesi 54.8 3.2 0.00011 32.4 0.5 26 173-200 126-155 (157)
128 2dtg_E Insulin receptor; IR ec 53.1 16 0.00056 37.0 5.7 15 148-162 282-296 (897)
129 2y38_A Laminin subunit alpha-5 50.6 11 0.00039 34.9 3.7 7 64-70 302-308 (403)
130 3cfw_A L-selectin; EGF, cell a 48.2 6.6 0.00023 30.8 1.5 27 173-201 126-156 (164)
131 1g1t_A E-selectin; EGF, adhesi 47.7 4.3 0.00015 31.6 0.2 10 93-102 141-150 (157)
132 3f1s_B Vitamin K-dependent pro 40.1 16 0.00056 31.4 2.9 44 9-52 3-50 (283)
133 3v64_C Agrin; beta propeller, 36.8 14 0.00048 32.7 1.9 31 14-44 8-39 (349)
134 3asi_A Neurexin-1-alpha; beta- 35.5 16 0.00056 33.2 2.2 27 173-201 192-223 (410)
135 1q4g_A Prostaglandin G/H synth 34.9 12 0.0004 36.2 1.2 26 49-77 8-39 (553)
136 1ccv_A AMCI, chymotrypsin inhi 34.3 19 0.00064 23.4 1.8 17 184-200 35-52 (56)
137 3nt1_A Prostaglandin-endoperox 34.1 16 0.00053 35.7 1.8 26 49-77 7-38 (587)
138 2i9a_A Urokinase-type plasmino 28.2 31 0.0011 27.1 2.4 25 50-77 14-45 (145)
139 1szb_A Mannose binding lectin- 27.7 21 0.00072 28.2 1.3 23 55-77 140-166 (170)
140 3fby_A COMP, cartilage oligome 24.2 31 0.0011 33.3 2.0 26 173-198 28-58 (551)
141 2y38_A Laminin subunit alpha-5 23.4 46 0.0016 30.8 3.0 17 182-200 356-373 (403)
142 1cmr_A Charybdotoxin, alpha ch 20.8 76 0.0026 18.3 2.5 23 42-65 6-30 (31)
143 3qcw_A Neurexin-1-alpha; synap 20.5 45 0.0015 35.2 2.5 31 170-202 1019-1056(1245)
144 1hx2_A BSTI; beta-sheet disulf 20.1 1.4E+02 0.0049 19.1 4.2 17 184-200 37-56 (60)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=153.03 Aligned_cols=144 Identities=31% Similarity=0.715 Sum_probs=69.6
Q ss_pred CCCCCCCC-CCEEcCCCeEEcCCCCeeCCCCCcc-cCC-CCCC-CceecCCCceeeCCCcccCCCCCccc-cccCCCCCC
Q psy8491 45 PVCSSPCI-NGACVFPEQCHCSPGFQFVNETYCE-PYC-ENCQ-HGTCTAPSVCECESGFVHNNETNACE-RICEEPKPP 119 (273)
Q Consensus 45 ~~C~~~C~-~g~C~~~~~C~C~~Gy~g~~~~~C~-~~C-~~C~-~G~C~~~~~C~C~~Gy~g~~~~~~C~-~~C~~~C~~ 119 (273)
+.|+.+|. +|.|++.++|+|.+||+| ..|+ +.| ..|. +|+|++++.|+|.+||+|. .|+ +.|..+|.+
T Consensus 149 ~~C~~~C~~~G~C~~~~~C~C~~G~~G---~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~----~C~~~~C~~~C~~ 221 (324)
T 2ygq_A 149 AECPGGCRNGGFCNERRICECPDGFHG---PHCEKALCTPRCMNGGLCVTPGFCICPPGFYGV----NCDKANCSTTCFN 221 (324)
T ss_dssp CCCSSCCCSSCEECTTSCEECCTTEES---SSSCEESSSSCCCTTCEECSSCCEECCTTCBTT----TTCBCCCSSCCCS
T ss_pred CCCCCCCCCCCEECCCCeEECCCCCcC---CCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCC----CcccCcCCCCCCC
Confidence 46777888 799998899999999999 6676 456 6777 5899998999999999995 443 457777876
Q ss_pred CCCCeecCCCCceeeCCC----CC---cCCCCCCC-Ccccc----cCCCCeeeCCCCCCCCCCCC-CCC-CCeecCCCee
Q psy8491 120 LYPGLGTIPNTERTCLDN----KC---HCSEGDSN-PYCII----QCDVGYTLNPRTLYCEPECF-NCT-RGYCLEPNEC 185 (273)
Q Consensus 120 ~~~g~C~~~~~~C~C~~G----~C---~C~~~C~n-g~C~~----~C~~Gy~g~~c~~~C~~~C~-~C~-nG~C~~~~~C 185 (273)
+|.|+.... |.|++| .| .|..+|.| |.|+. .|++||+|..|+. ++|. +|. +|+|+..++|
T Consensus 222 --~G~C~~~~~-C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~---~~C~~~C~~~g~C~~~~~C 295 (324)
T 2ygq_A 222 --GGTCFYPGK-CICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSK---PVCEPGCGAHGTCHEPNKC 295 (324)
T ss_dssp --SCCBSCSSC-BCCCTTCCTTTTC-------------------------------------------------------
T ss_pred --CCeeCCCCe-eeCCCCccCCCCCcCcCCCcCCCCCEECCCCEEECCCCCcCCCCcC---CCCCCCCCCCCEECCCCEe
Confidence 899998777 999999 56 45667776 56665 8999999987762 3444 563 5899988999
Q ss_pred ECCCCceeCCCCccccCC
Q psy8491 186 SCPYNFHLEGGMCMIAEG 203 (273)
Q Consensus 186 ~C~~Gy~G~~~~C~~~~~ 203 (273)
.|++||+| ..|+....
T Consensus 296 ~C~~G~~G--~~C~~~~~ 311 (324)
T 2ygq_A 296 QCQEGWHG--RHCNKRYE 311 (324)
T ss_dssp ------------------
T ss_pred ECCCCCcC--CCCCCCCc
Confidence 99999999 88987643
No 2
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.61 E-value=5e-16 Score=130.11 Aligned_cols=143 Identities=24% Similarity=0.484 Sum_probs=95.5
Q ss_pred cCCCCceeeeCCCCeeCCCCCCCCCCCC--CCC-CCEEcCCCeEEcCCCCeeCCCCCcc-cCC-CCC--CCceecCCCce
Q psy8491 22 SQDLRQAVICRFDLKFVNASYCAPVCSS--PCI-NGACVFPEQCHCSPGFQFVNETYCE-PYC-ENC--QHGTCTAPSVC 94 (273)
Q Consensus 22 ~~~~~~~C~C~~Gy~~~~~~~C~~~C~~--~C~-~g~C~~~~~C~C~~Gy~g~~~~~C~-~~C-~~C--~~G~C~~~~~C 94 (273)
.....+.|.|++||+|.. |...|.+ .|. +++|+.+++|+|.+||+| ..|+ ++| ..| .||.|+++++|
T Consensus 12 ~~~~~~~c~C~~g~~G~~---C~~~C~~~~~c~~~g~C~~~g~C~C~~G~~G---~~C~~~~C~~~C~~~~g~C~~~~~C 85 (169)
T 2vj2_A 12 SIEGRSAVTCDDYYYGFG---CNKFCRPRDDFFGHYACDQNGNKTCMEGWMG---PECNRAICRQGCSPKHGSCKLPGDC 85 (169)
T ss_dssp ---------CCTTEETTT---TCEECCCEEETTEEEEECSSCCEEECTTEES---TTSCEECCCTTCCTTTEECSSTTCC
T ss_pred ccccCeeeeCCCcCcCCC---cccccCCCCCcCCCCEeCCCCeeECCCCCcC---CCCCCCCCCCCCCCCCcccCCCCee
Confidence 444678999999999865 4445543 466 889988899999999999 6776 556 556 58999988999
Q ss_pred eeCCCcccCCCCCccccccCCCCCCCCCCeecCCCCceeeCCCCCcCCCCCCCCcccccCCCCeeeCCCCCCCCCCCC--
Q psy8491 95 ECESGFVHNNETNACERICEEPKPPLYPGLGTIPNTERTCLDNKCHCSEGDSNPYCIIQCDVGYTLNPRTLYCEPECF-- 172 (273)
Q Consensus 95 ~C~~Gy~g~~~~~~C~~~C~~~C~~~~~g~C~~~~~~C~C~~G~C~C~~~C~ng~C~~~C~~Gy~g~~c~~~C~~~C~-- 172 (273)
+|++||+|..++ +|.. .+.|.+ |.|+..+. | .|++||+|..|+.. .++|.
T Consensus 86 ~C~~G~~G~~C~-~C~~--~~~C~~---g~C~~~~~-C--------------------~C~~G~~G~~C~~~-~~~C~~~ 137 (169)
T 2vj2_A 86 RCQYGWQGLYCD-KCIP--HPGCVH---GICNEPWQ-C--------------------LCETNWGGQLCDKD-LNYCGTH 137 (169)
T ss_dssp EECTTEESSSSC-EECC--CTTCSS---EECSSTTC-C--------------------EECTTEETTTTCEE-SCHHHHT
T ss_pred ECCCCCCCCCcc-cCCC--CCCCCC---CCcCCCCE-E--------------------eCCCCCCCCcccCC-CCCCCCC
Confidence 999999996432 2211 123555 46664333 3 67789999877621 22332
Q ss_pred -CCCC-CeecCC----CeeECCCCceeCCCCccc
Q psy8491 173 -NCTR-GYCLEP----NECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 173 -~C~n-G~C~~~----~~C~C~~Gy~G~~~~C~~ 200 (273)
+|.+ |+|+.. ++|+|++||+| ..|+.
T Consensus 138 ~~C~~~g~C~~~~~~~~~C~C~~G~~G--~~Ce~ 169 (169)
T 2vj2_A 138 QPCLNGGTCSNTGPDKYQCSCPEGYSG--PNCEI 169 (169)
T ss_dssp CCCCTTCEEEECSTTCEEEECCTTCCS--TTSCC
T ss_pred CCCCCCCEEcCCCCCCcEeECCCCCcC--cCcCC
Confidence 5755 899753 89999999999 77763
No 3
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.55 E-value=4.9e-15 Score=136.33 Aligned_cols=128 Identities=28% Similarity=0.635 Sum_probs=61.6
Q ss_pred CceeeeCCCCeeCCCCCCCCCCCCCCC-CCEEcCCCeEEcCCCCeeCCCCCcc-cCC-CCCC-CceecCCCceeeCCCcc
Q psy8491 26 RQAVICRFDLKFVNASYCAPVCSSPCI-NGACVFPEQCHCSPGFQFVNETYCE-PYC-ENCQ-HGTCTAPSVCECESGFV 101 (273)
Q Consensus 26 ~~~C~C~~Gy~~~~~~~C~~~C~~~C~-~g~C~~~~~C~C~~Gy~g~~~~~C~-~~C-~~C~-~G~C~~~~~C~C~~Gy~ 101 (273)
.+.|.|++||.|...+. +.|.++|. +|.|+.+++|+|.+||+| ..|+ +.| ..|. +|+|+.+++|.|++||+
T Consensus 164 ~~~C~C~~G~~G~~C~~--~~C~~~C~~~G~C~~~~~C~C~~G~~G---~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~ 238 (324)
T 2ygq_A 164 RRICECPDGFHGPHCEK--ALCTPRCMNGGLCVTPGFCICPPGFYG---VNCDKANCSTTCFNGGTCFYPGKCICPPGLE 238 (324)
T ss_dssp TSCEECCTTEESSSSCE--ESSSSCCCTTCEECSSCCEECCTTCBT---TTTCBCCCSSCCCSSCCBSCSSCBCCCTTCC
T ss_pred CCeEECCCCCcCCCCCC--CCCCCCCCCCCEEcCCCEEeCCCCccC---CCcccCcCCCCCCCCCeeCCCCeeeCCCCcc
Confidence 58999999999864332 45667787 899999999999999999 5676 456 6777 48999889999999999
Q ss_pred cCCCCCccc-cccCCCCCCCCCCeecCCCCceeeCCC----CC---cCCCCCCC-Ccccc----cCCCCeeeCCCCC
Q psy8491 102 HNNETNACE-RICEEPKPPLYPGLGTIPNTERTCLDN----KC---HCSEGDSN-PYCII----QCDVGYTLNPRTL 165 (273)
Q Consensus 102 g~~~~~~C~-~~C~~~C~~~~~g~C~~~~~~C~C~~G----~C---~C~~~C~n-g~C~~----~C~~Gy~g~~c~~ 165 (273)
|+ .|+ +.|..+|.+ +|.|+.... |.|++| .| .|...|.+ |+|.+ .|++||+|..|+.
T Consensus 239 G~----~C~~~~C~~~C~~--~g~C~~~~~-C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 239 GE----QCEISKCPQPCRN--GGKCIGKSK-CKCSKGYQGDLCSKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCNK 308 (324)
T ss_dssp TT----TTC--------------------------------------------------------------------
T ss_pred CC----CCCcCcCCCcCCC--CCEECCCCE-EECCCCCcCCCCcCCCCCCCCCCCCEECCCCEeECCCCCcCCCCCC
Confidence 96 443 456667876 899998777 999999 56 45566754 67765 9999999987764
No 4
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.22 E-value=1.8e-11 Score=102.23 Aligned_cols=114 Identities=24% Similarity=0.535 Sum_probs=78.8
Q ss_pred CceeeeCCCCeeCCCCCCCCCCCCCC--CCCEEcCCCeEEcCCCCeeCCCCCccc-CC-CCCCCceecCCCceeeCCCcc
Q psy8491 26 RQAVICRFDLKFVNASYCAPVCSSPC--INGACVFPEQCHCSPGFQFVNETYCEP-YC-ENCQHGTCTAPSVCECESGFV 101 (273)
Q Consensus 26 ~~~C~C~~Gy~~~~~~~C~~~C~~~C--~~g~C~~~~~C~C~~Gy~g~~~~~C~~-~C-~~C~~G~C~~~~~C~C~~Gy~ 101 (273)
.++|+|.+||.|...+. ++|...| .+|.|+++++|+|.+||+| ..|+. .. ..|.||+|+.+++|+|++||+
T Consensus 49 ~g~C~C~~G~~G~~C~~--~~C~~~C~~~~g~C~~~~~C~C~~G~~G---~~C~~C~~~~~C~~g~C~~~~~C~C~~G~~ 123 (169)
T 2vj2_A 49 NGNKTCMEGWMGPECNR--AICRQGCSPKHGSCKLPGDCRCQYGWQG---LYCDKCIPHPGCVHGICNEPWQCLCETNWG 123 (169)
T ss_dssp SCCEEECTTEESTTSCE--ECCCTTCCTTTEECSSTTCCEECTTEES---SSSCEECCCTTCSSEECSSTTCCEECTTEE
T ss_pred CCeeECCCCCcCCCCCC--CCCCCCCCCCCcccCCCCeeECCCCCCC---CCcccCCCCCCCCCCCcCCCCEEeCCCCCC
Confidence 56789999999754322 4566667 4899999999999999999 55542 11 348889999889999999999
Q ss_pred cCCCCCccccccC--CCCCCCCCCeecCCCCceeeCCCCCcCCCCCCCCcccccCCCCeeeCCCC
Q psy8491 102 HNNETNACERICE--EPKPPLYPGLGTIPNTERTCLDNKCHCSEGDSNPYCIIQCDVGYTLNPRT 164 (273)
Q Consensus 102 g~~~~~~C~~~C~--~~C~~~~~g~C~~~~~~C~C~~G~C~C~~~C~ng~C~~~C~~Gy~g~~c~ 164 (273)
|+.+... ...|. .+|.+ +|+|+.... ...+| .|++||+|..|+
T Consensus 124 G~~C~~~-~~~C~~~~~C~~--~g~C~~~~~---------------~~~~C--~C~~G~~G~~Ce 168 (169)
T 2vj2_A 124 GQLCDKD-LNYCGTHQPCLN--GGTCSNTGP---------------DKYQC--SCPEGYSGPNCE 168 (169)
T ss_dssp TTTTCEE-SCHHHHTCCCCT--TCEEEECST---------------TCEEE--ECCTTCCSTTSC
T ss_pred CCcccCC-CCCCCCCCCCCC--CCEEcCCCC---------------CCcEe--ECCCCCcCcCcC
Confidence 9643210 12343 46766 788875310 01234 678899998664
No 5
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.18 E-value=7.3e-11 Score=112.15 Aligned_cols=123 Identities=21% Similarity=0.422 Sum_probs=85.3
Q ss_pred CeEEcCCCCeeCCCCCcccCCCCCC-CceecC-CCceeeCCCcccCCCCCccc---------cccC--CCCCCCCCCeec
Q psy8491 60 EQCHCSPGFQFVNETYCEPYCENCQ-HGTCTA-PSVCECESGFVHNNETNACE---------RICE--EPKPPLYPGLGT 126 (273)
Q Consensus 60 ~~C~C~~Gy~g~~~~~C~~~C~~C~-~G~C~~-~~~C~C~~Gy~g~~~~~~C~---------~~C~--~~C~~~~~g~C~ 126 (273)
..|.|.+||+| ..|+..|..|. +|+|++ .++|+|++||+|..+...|. ..|. ..|.+ ++.|.
T Consensus 185 ~~c~C~~g~~G---~~C~~~C~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~--~g~C~ 259 (423)
T 2gy5_A 185 IVRRCEAQKWG---PECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKS--YVFCL 259 (423)
T ss_dssp EECSSCTTEES---TTSCEECCCCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTT--CCEEE
T ss_pred cCCcCCCCCCC---CCCCCCCCCCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCC--CCEEC
Confidence 35889999999 77887676787 489986 68999999999976654332 2332 23544 56665
Q ss_pred CCCCceeeCCCCCcCCCCCCCCcccccCCCCeeeCCCCCCCCCCCCCCCC-CeecCCCeeECCCCceeCCCCcccc
Q psy8491 127 IPNTERTCLDNKCHCSEGDSNPYCIIQCDVGYTLNPRTLYCEPECFNCTR-GYCLEPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 127 ~~~~~C~C~~G~C~C~~~C~ng~C~~~C~~Gy~g~~c~~~C~~~C~~C~n-G~C~~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
.....|.|++| .....|...|.+||+|..|+..| +|.+ |+|...+.|.|++||+| ..|+..
T Consensus 260 ~~~~~C~C~~G-------~~G~~C~~~C~~G~~G~~C~~~C-----~C~ngg~C~~~~~C~C~~G~~G--~~Ce~~ 321 (423)
T 2gy5_A 260 PDPYGCSCATG-------WKGLQCNEACHPGFYGPDCKLRC-----SCNNGEMCDRFQGCLCSPGWQG--LQCERE 321 (423)
T ss_dssp TTTTEEECCBT-------CBSGGGCBCCCTTBCSBTTCCBC-----CCTTCCEEETTTEEECCTTCBS--TTSCBC
T ss_pred CCCCeEEeCCC-------cccccccCccCCCCcCCcccccc-----cCCCCCEecCCCceECCCCCcC--CCCccC
Confidence 44434777766 11124443578888887655433 3545 79998878999999999 889875
No 6
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.13 E-value=2.3e-10 Score=114.59 Aligned_cols=136 Identities=25% Similarity=0.487 Sum_probs=87.4
Q ss_pred cccCCCCce---eeeCCCCeeCCCCCCC--------CCCCC-----CCC-CCEEcCCCeEEcC----CCCeeCCCCCcc-
Q psy8491 20 SMSQDLRQA---VICRFDLKFVNASYCA--------PVCSS-----PCI-NGACVFPEQCHCS----PGFQFVNETYCE- 77 (273)
Q Consensus 20 ~~~~~~~~~---C~C~~Gy~~~~~~~C~--------~~C~~-----~C~-~g~C~~~~~C~C~----~Gy~g~~~~~C~- 77 (273)
+.+..+.+. |.|.+||.|...+.=. ..|.. +|. +|.|+. ++|.|. +||+| ..|+
T Consensus 448 C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-g~C~C~~~~~~Gy~G---~~Ce~ 523 (690)
T 3fcs_B 448 CNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC-GQCVCHSSDFGKITG---KYCEC 523 (690)
T ss_dssp TTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS-SSEEECCCSSCCCBS---TTSCB
T ss_pred ccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-CeeEeecCCCCCeeC---CCcCc
Confidence 333444445 9999999986532100 12442 377 899985 899999 99999 5665
Q ss_pred --cCCC-----CCC-CceecCCCceeeCCCcccCCCCCcc---ccccC----CCCCCCCCCeecCCCCceeeCCCCCcCC
Q psy8491 78 --PYCE-----NCQ-HGTCTAPSVCECESGFVHNNETNAC---ERICE----EPKPPLYPGLGTIPNTERTCLDNKCHCS 142 (273)
Q Consensus 78 --~~C~-----~C~-~G~C~~~~~C~C~~Gy~g~~~~~~C---~~~C~----~~C~~~~~g~C~~~~~~C~C~~G~C~C~ 142 (273)
..|. .|. ||.|+. +.|.|.+||+|..+. | ...|. .+|.+ +|.|+.
T Consensus 524 ~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~Ce--C~~~~~~C~~~~g~~C~~--~G~C~~--------------- 583 (690)
T 3fcs_B 524 DDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCN--CTTRTDTCMSSNGLLCSG--RGKCEC--------------- 583 (690)
T ss_dssp CSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSC--EECCCTTTBCTTSSBTSS--SCEEET---------------
T ss_pred ccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCc--cCCCCCcccCCCCCCCCC--CCEEeC---------------
Confidence 3451 476 689977 899999999996542 2 12332 13433 444432
Q ss_pred CCCCCCcccccC-CCCeeeCCCCCCCCCCCC-CCCC-CeecCCCeeECCCCcee
Q psy8491 143 EGDSNPYCIIQC-DVGYTLNPRTLYCEPECF-NCTR-GYCLEPNECSCPYNFHL 193 (273)
Q Consensus 143 ~~C~ng~C~~~C-~~Gy~g~~c~~~C~~~C~-~C~n-G~C~~~~~C~C~~Gy~G 193 (273)
+.| .| ++||+|..|+. | +.|. +|.+ |+|+. |..||+|
T Consensus 584 -----g~C--~C~~~Gy~G~~Ce~-C-~~C~~~C~~~g~Cv~-----C~~g~tG 623 (690)
T 3fcs_B 584 -----GSC--VCIQPGSYGDTCEK-C-PTCPDACTFKKECVE-----CKKFDRG 623 (690)
T ss_dssp -----TEE--ECCSTTCBSTTSCB-C-TTSCCTTTSCCGGGT-----TTTTCCS
T ss_pred -----CEE--ECCCCCccCCCcCc-C-CCCCCCCCCCCCccc-----CCCCCcc
Confidence 233 77 78999988874 2 2343 5644 78875 9999999
No 7
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.05 E-value=3.2e-11 Score=101.79 Aligned_cols=128 Identities=26% Similarity=0.634 Sum_probs=81.1
Q ss_pred CCCCCCEEcC---CCeEEcCCCCeeCCCCCcc--cCCC------CCCC-ceecCC--------CceeeCCCcccCCCCCc
Q psy8491 49 SPCINGACVF---PEQCHCSPGFQFVNETYCE--PYCE------NCQH-GTCTAP--------SVCECESGFVHNNETNA 108 (273)
Q Consensus 49 ~~C~~g~C~~---~~~C~C~~Gy~g~~~~~C~--~~C~------~C~~-G~C~~~--------~~C~C~~Gy~g~~~~~~ 108 (273)
.+|.||+|++ .++|+|.+||+|.+...|+ ++|. .|.+ ++|++. ++|+|++||+|+.. .
T Consensus 11 ~pC~ng~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~--~ 88 (186)
T 1z1y_A 11 TICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED--T 88 (186)
T ss_dssp CCCBTEEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT--E
T ss_pred CCCCCCEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC--C
Confidence 4677888876 4689999999984334665 3452 3664 788643 27999999998532 3
Q ss_pred cc-cccC-CCCCCCCCCeec----CCCCceeeCCCCCcCCCCCCCCcccccCCCCeeeCC-CCCCCC----CCCC-CC-C
Q psy8491 109 CE-RICE-EPKPPLYPGLGT----IPNTERTCLDNKCHCSEGDSNPYCIIQCDVGYTLNP-RTLYCE----PECF-NC-T 175 (273)
Q Consensus 109 C~-~~C~-~~C~~~~~g~C~----~~~~~C~C~~G~C~C~~~C~ng~C~~~C~~Gy~g~~-c~~~C~----~~C~-~C-~ 175 (273)
|+ ..|. .+|.+ ++.|+ .... ...| .|++||+|.. ....|+ .+|. +| .
T Consensus 89 C~~d~C~~~~C~~--~g~C~~~~~~~~g----------------~~~C--~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~ 148 (186)
T 1z1y_A 89 CVLDVCQYXNCGE--SGECIVEYLSEIQ----------------SAGC--SCAIGXVPNPEDEXXCTXTGETACQLXCNT 148 (186)
T ss_dssp EEEGGGTTCCCCT--TEEEEEEEETTEE----------------EEEE--EECTEEEEETTTTTEEEEEECCCCCCCCCT
T ss_pred CCCCcCcCCCCCC--CCEEeeCCcCCCC----------------CceE--ECCCCCcccCCCCCcceEcCCCcccccccc
Confidence 42 4454 25654 56765 2110 0134 7888999932 123343 3565 77 5
Q ss_pred C-CeecC---CCeeECCCCceeCCCCccc
Q psy8491 176 R-GYCLE---PNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 176 n-G~C~~---~~~C~C~~Gy~G~~~~C~~ 200 (273)
+ |+|+. .|+|.|++||+| ..++.
T Consensus 149 ~~~~C~n~~g~y~C~C~~G~~g--~~~~~ 175 (186)
T 1z1y_A 149 DNEVCXNVEGVYXCQCMEGFTF--DXEXN 175 (186)
T ss_dssp TTEEEEEETTEEEEEECTTCEE--ETTTT
T ss_pred cCcceecCCCCeeeECCCCCcc--Ccccc
Confidence 5 79973 479999999999 44444
No 8
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.03 E-value=4.3e-10 Score=106.85 Aligned_cols=141 Identities=21% Similarity=0.385 Sum_probs=85.7
Q ss_pred eeeeCCCCeeCCCCCCCCCCCCCCC-CCEEcC-CCeEEcCCCCeeCCCCCcc-------------cCC---CCCCC-cee
Q psy8491 28 AVICRFDLKFVNASYCAPVCSSPCI-NGACVF-PEQCHCSPGFQFVNETYCE-------------PYC---ENCQH-GTC 88 (273)
Q Consensus 28 ~C~C~~Gy~~~~~~~C~~~C~~~C~-~g~C~~-~~~C~C~~Gy~g~~~~~C~-------------~~C---~~C~~-G~C 88 (273)
.|.|.+||+|. .|...|. +|. +|.|.+ .++|+|.+||+| ..|+ ..| ..|.+ +.|
T Consensus 186 ~c~C~~g~~G~---~C~~~C~-~C~~~G~C~~~~g~C~C~~G~~G---~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C 258 (423)
T 2gy5_A 186 VRRCEAQKWGP---ECNHLCT-ACMNNGVCHEDTGECICPPGFMG---RTCEKACELHTFGRTCKERCSGQEGCKSYVFC 258 (423)
T ss_dssp ECSSCTTEEST---TSCEECC-CCCTTCEECTTTCCEECCTTEES---TTSCEECCTTEESTTSCEECCSTTTTTTCCEE
T ss_pred CCcCCCCCCCC---CCCCCCC-CCCCCCEEECCCCcEeCCCCccC---CCcccccCCCCCCCCcCccCCCCCCCCCCCEE
Confidence 47799999974 4554553 587 899997 789999999999 4444 233 23554 677
Q ss_pred c-CCCceeeCCCcccCCCCCccc-----cccCCCCCCCCCCeecCCCCceeeCCCCCcCCCCCCCCcccccCCCCeeeCC
Q psy8491 89 T-APSVCECESGFVHNNETNACE-----RICEEPKPPLYPGLGTIPNTERTCLDNKCHCSEGDSNPYCIIQCDVGYTLNP 162 (273)
Q Consensus 89 ~-~~~~C~C~~Gy~g~~~~~~C~-----~~C~~~C~~~~~g~C~~~~~~C~C~~G~C~C~~~C~ng~C~~~C~~Gy~g~~ 162 (273)
. ..++|.|.+||+|..+...|. +.|...|...+++.|+.... | .|++||+|..
T Consensus 259 ~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~-C--------------------~C~~G~~G~~ 317 (423)
T 2gy5_A 259 LPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG-C--------------------LCSPGWQGLQ 317 (423)
T ss_dssp ETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTE-E--------------------ECCTTCBSTT
T ss_pred CCCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCCc-e--------------------ECCCCCcCCC
Confidence 5 367999999999964433342 12322222222455544433 3 6778899887
Q ss_pred CCCCCCCCCCCCCCCeecCCCeeECCCCceeCCCCcccc
Q psy8491 163 RTLYCEPECFNCTRGYCLEPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 163 c~~~C~~~C~~C~nG~C~~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
|+....+.-.+ ........|.|+.||.| ..|+..
T Consensus 318 Ce~~~~~~~~~---~~~~~~~~~~c~~g~~g--~~C~~~ 351 (423)
T 2gy5_A 318 CEREGIPRMTP---KIVDLPDHIEVNSGKFN--PICKAS 351 (423)
T ss_dssp SCBCSSCCCCC---EECSCCSBCCEESEEEC--CEEEEE
T ss_pred CccCccCCcCc---ceecCCCeEEeCCCccC--Cccccc
Confidence 76332111011 11122456888888888 666643
No 9
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.95 E-value=2.7e-10 Score=96.05 Aligned_cols=125 Identities=22% Similarity=0.542 Sum_probs=83.7
Q ss_pred ccccCCCCceeeeCCCCeeCCCCCCC--CCCC-----CCCC-CCEEcC--------CCeEEcCCCCeeCCCCCcc-cCC-
Q psy8491 19 TSMSQDLRQAVICRFDLKFVNASYCA--PVCS-----SPCI-NGACVF--------PEQCHCSPGFQFVNETYCE-PYC- 80 (273)
Q Consensus 19 ~~~~~~~~~~C~C~~Gy~~~~~~~C~--~~C~-----~~C~-~g~C~~--------~~~C~C~~Gy~g~~~~~C~-~~C- 80 (273)
+++++.++|.|.|++||++.+...|+ ..|. .+|. ++.|++ .++|+|.+||+|.. ..|+ ++|
T Consensus 17 ~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~-~~C~~d~C~ 95 (186)
T 1z1y_A 17 QLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE-DTCVLDVCQ 95 (186)
T ss_dssp EEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET-TEEEEGGGT
T ss_pred EeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC-CCCCCCcCc
Confidence 67788899999999999987545564 3353 3576 688975 34899999999922 2444 556
Q ss_pred -CCCC-Cceec----CC---CceeeCCCcccCC-CCCccc----cccCCCC-CCCCCCeecCCCCceeeCCCCCcCCCCC
Q psy8491 81 -ENCQ-HGTCT----AP---SVCECESGFVHNN-ETNACE----RICEEPK-PPLYPGLGTIPNTERTCLDNKCHCSEGD 145 (273)
Q Consensus 81 -~~C~-~G~C~----~~---~~C~C~~Gy~g~~-~~~~C~----~~C~~~C-~~~~~g~C~~~~~~C~C~~G~C~C~~~C 145 (273)
..|. +|+|+ +. +.|.|++||+|.. ....|+ ..|..+| .+ ++.|+....
T Consensus 96 ~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~--~~~C~n~~g--------------- 158 (186)
T 1z1y_A 96 YXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTD--NEVCXNVEG--------------- 158 (186)
T ss_dssp TCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTT--TEEEEEETT---------------
T ss_pred CCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccccccccc--CcceecCCC---------------
Confidence 4687 58998 53 4899999999842 123564 2355556 44 456543221
Q ss_pred CCCcccccCCCCeeeCCCC
Q psy8491 146 SNPYCIIQCDVGYTLNPRT 164 (273)
Q Consensus 146 ~ng~C~~~C~~Gy~g~~c~ 164 (273)
..+| .|++||+|+.++
T Consensus 159 -~y~C--~C~~G~~g~~~~ 174 (186)
T 1z1y_A 159 -VYXC--QCMEGFTFDXEX 174 (186)
T ss_dssp -EEEE--EECTTCEEETTT
T ss_pred -Ceee--ECCCCCccCccc
Confidence 0123 788899998665
No 10
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.92 E-value=2.9e-09 Score=106.61 Aligned_cols=114 Identities=25% Similarity=0.513 Sum_probs=74.1
Q ss_pred CCEEcCCCeEEcCCCCeeCCCCCcc-----------cCCC------CCC-CceecCCCceeeC----CCcccCCCCCcc-
Q psy8491 53 NGACVFPEQCHCSPGFQFVNETYCE-----------PYCE------NCQ-HGTCTAPSVCECE----SGFVHNNETNAC- 109 (273)
Q Consensus 53 ~g~C~~~~~C~C~~Gy~g~~~~~C~-----------~~C~------~C~-~G~C~~~~~C~C~----~Gy~g~~~~~~C- 109 (273)
+|.+. .++|.|.+||+| ..|+ ..|. .|. +|+|+ .++|.|. +||+|..+. +
T Consensus 452 ~G~~~-~G~C~C~~Gy~G---~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~g~C~C~~~~~~Gy~G~~Ce--~~ 524 (690)
T 3fcs_B 452 NGTFE-CGVCRCGPGWLG---SQCECSEEDYRPSQQDECSPREGQPVCSQRGECL-CGQCVCHSSDFGKITGKYCE--CD 524 (690)
T ss_dssp SEEEE-TTEEEECTTCCS---SSSCCSCC------CCCCSSSSSSCGGGGSEEEC-SSSEEECCCSSCCCBSTTSC--BC
T ss_pred CCeEe-CCceEeCCCccC---CceeeccCccCCccCCcCCCCCCCCCCCCCCEEE-CCeeEeecCCCCCeeCCCcC--cc
Confidence 34443 477999999999 4454 1251 276 58998 4899999 999996431 1
Q ss_pred ccccCC----CCCCCCCCeecCCCCceeeCCCCCcCCCCCCCCcccccCCCCeeeCCCCC-CCCCCCC-----CCCC-Ce
Q psy8491 110 ERICEE----PKPPLYPGLGTIPNTERTCLDNKCHCSEGDSNPYCIIQCDVGYTLNPRTL-YCEPECF-----NCTR-GY 178 (273)
Q Consensus 110 ~~~C~~----~C~~~~~g~C~~~~~~C~C~~G~C~C~~~C~ng~C~~~C~~Gy~g~~c~~-~C~~~C~-----~C~n-G~ 178 (273)
...|.. +|.+ +|.|+. +.| .|++||+|..|+. .....|. +|.+ |+
T Consensus 525 ~~~C~~~~~~~C~~--~G~C~~--------------------g~C--~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~ 580 (690)
T 3fcs_B 525 DFSCVRYKGEMCSG--HGQCSC--------------------GDC--LCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGK 580 (690)
T ss_dssp SSCCCBSSSSBGGG--SEEEET--------------------TEE--EECTTEESSSSCEECCCTTTBCTTSSBTSSSCE
T ss_pred cCcCcCCCCCCCCC--CCEecC--------------------Cee--ECcCCCcCCCCccCCCCCcccCCCCCCCCCCCE
Confidence 122321 2333 344432 334 7888999998871 1123343 4654 89
Q ss_pred ecCCCeeEC-CCCceeCCCCccc
Q psy8491 179 CLEPNECSC-PYNFHLEGGMCMI 200 (273)
Q Consensus 179 C~~~~~C~C-~~Gy~G~~~~C~~ 200 (273)
|+. +.|.| ++||+| ..|+.
T Consensus 581 C~~-g~C~C~~~Gy~G--~~Ce~ 600 (690)
T 3fcs_B 581 CEC-GSCVCIQPGSYG--DTCEK 600 (690)
T ss_dssp EET-TEEECCSTTCBS--TTSCB
T ss_pred EeC-CEEECCCCCccC--CCcCc
Confidence 975 79999 999999 88876
No 11
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.80 E-value=1e-08 Score=102.51 Aligned_cols=137 Identities=30% Similarity=0.595 Sum_probs=85.4
Q ss_pred CceeeeCCCCeeCCCCCCC----------CCCCC-----CCC-CCEEcCCCeEEcC------CCCeeCCCCCcc---cCC
Q psy8491 26 RQAVICRFDLKFVNASYCA----------PVCSS-----PCI-NGACVFPEQCHCS------PGFQFVNETYCE---PYC 80 (273)
Q Consensus 26 ~~~C~C~~Gy~~~~~~~C~----------~~C~~-----~C~-~g~C~~~~~C~C~------~Gy~g~~~~~C~---~~C 80 (273)
.+.|.|.+||.|...+ |. ..|.. +|. +|.|+. ++|.|. +||+| ..|+ ..|
T Consensus 445 ~g~C~C~~Gy~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-G~C~C~~~~~~~~G~~G---~~Ce~~~~~C 519 (687)
T 3k6s_B 445 CGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYG---QYCECDTINC 519 (687)
T ss_dssp SSSEEECSSEESTTSC-EESSSCCCSGGGSTTSSSTTSCGGGSSEEEET-TEEEECCCCSTTCCEES---TTSCEESSCS
T ss_pred CCEeEcCCCCcCCccc-ccCCcCCccccCCCCCCCCCCCcCCCCCEEeC-CEEEcCCCCCCCCCccc---cccccccccc
Confidence 5689999999987543 11 12432 376 899995 899999 99999 6675 345
Q ss_pred C-----CCC---CceecCCCceeeCCCcccCCCCCccc---cccCC----CCCCCCCCeecCCCCceeeCCCCCcCCCCC
Q psy8491 81 E-----NCQ---HGTCTAPSVCECESGFVHNNETNACE---RICEE----PKPPLYPGLGTIPNTERTCLDNKCHCSEGD 145 (273)
Q Consensus 81 ~-----~C~---~G~C~~~~~C~C~~Gy~g~~~~~~C~---~~C~~----~C~~~~~g~C~~~~~~C~C~~G~C~C~~~C 145 (273)
. .|. ||+|+. ++|.|.+||+|..+. |. ..|.. +|.+ +|.|
T Consensus 520 ~~~~~~~C~~~~~G~C~~-g~C~C~~G~~G~~Ce--c~~~~~~C~~~~g~~Cs~--~G~C-------------------- 574 (687)
T 3k6s_B 520 ERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSACQ--CERTTEGCLNPRRVECSG--RGRC-------------------- 574 (687)
T ss_dssp CEETTEETSHHHHEEEET-TEEEECTTCCSTTSC--SCCSSCTTBCTTCSBTSS--SCCB--------------------
T ss_pred cCCCCcCcCCCCCCeEEC-CEEEcCCCCcCCCCc--cCCCCCCCCCCCCCCCCC--CCcC--------------------
Confidence 2 365 588975 799999999996442 11 22221 1222 2322
Q ss_pred CCCcccccCCCCeeeCCCCCCCCCCCC-CCCC-CeecCCCeeECCCCceeC-CCCcccc
Q psy8491 146 SNPYCIIQCDVGYTLNPRTLYCEPECF-NCTR-GYCLEPNECSCPYNFHLE-GGMCMIA 201 (273)
Q Consensus 146 ~ng~C~~~C~~Gy~g~~c~~~C~~~C~-~C~n-G~C~~~~~C~C~~Gy~G~-~~~C~~~ 201 (273)
..+.| .|++||+|..|+. | +.|. +|.+ |.|+ .|...++|. +..|+..
T Consensus 575 ~~g~C--~C~~Gy~G~~Ce~-c-~~C~~~C~~~g~Cv-----~C~~~~~G~~~~~C~~~ 624 (687)
T 3k6s_B 575 RCNVC--ECHSGYQLPLCQE-C-PGCPSPCGKYISCA-----ECLKFEKGPFGKNCSAA 624 (687)
T ss_dssp CSSCB--CCSTTCCTTTTCC-C-TTSCCCCTTTHHHH-----TTTTSCSCCCSSCSSSS
T ss_pred CCCEE--ECCCCCcCCCCCC-C-CCCCcccCCCCCCC-----cccCCCCCCCCcccccc
Confidence 22445 8889999998874 2 2344 5654 6776 244445552 2456543
No 12
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.76 E-value=3.4e-09 Score=105.99 Aligned_cols=120 Identities=27% Similarity=0.580 Sum_probs=77.1
Q ss_pred CCCC-CCEEcCCCeEEcCCCCeeCCCCCcc--c----------CCC------CCC-CceecCCCceeeC------CCccc
Q psy8491 49 SPCI-NGACVFPEQCHCSPGFQFVNETYCE--P----------YCE------NCQ-HGTCTAPSVCECE------SGFVH 102 (273)
Q Consensus 49 ~~C~-~g~C~~~~~C~C~~Gy~g~~~~~C~--~----------~C~------~C~-~G~C~~~~~C~C~------~Gy~g 102 (273)
..|. +|.|.. ++|.|.+||+| ..|+ . .|. .|. +|.|+ .++|+|. +||+|
T Consensus 435 ~~Cs~~G~C~~-g~C~C~~Gy~G---~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~-~G~C~C~~~~~~~~G~~G 509 (687)
T 3k6s_B 435 SLCHGKGFLEC-GICRCDTGYIG---KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV-CGQCLCHTSDVPGKLIYG 509 (687)
T ss_dssp STGGGSEEESS-SSEEECSSEES---TTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE-TTEEEECCCCSTTCCEES
T ss_pred CCCCCCCEEeC-CEeEcCCCCcC---CcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe-CCEEEcCCCCCCCCCccc
Confidence 3576 888884 89999999999 4454 1 351 266 58998 4799999 99999
Q ss_pred CCCCCcc-ccccCC----CCCCCCCCeecCCCCceeeCCCCCcCCCCCCCCcccccCCCCeeeCCCCC-CCCCCCC----
Q psy8491 103 NNETNAC-ERICEE----PKPPLYPGLGTIPNTERTCLDNKCHCSEGDSNPYCIIQCDVGYTLNPRTL-YCEPECF---- 172 (273)
Q Consensus 103 ~~~~~~C-~~~C~~----~C~~~~~g~C~~~~~~C~C~~G~C~C~~~C~ng~C~~~C~~Gy~g~~c~~-~C~~~C~---- 172 (273)
..+. + ...|.. +|.+..+|.|+ .|.| .|++||+|..|+. .....|.
T Consensus 510 ~~Ce--~~~~~C~~~~~~~C~~~~~G~C~--------------------~g~C--~C~~G~~G~~Cec~~~~~~C~~~~g 565 (687)
T 3k6s_B 510 QYCE--CDTINCERYNGQVCGGPGRGLCF--------------------CGKC--RCHPGFEGSACQCERTTEGCLNPRR 565 (687)
T ss_dssp TTSC--EESSCSCEETTEETSHHHHEEEE--------------------TTEE--EECTTCCSTTSCSCCSSCTTBCTTC
T ss_pred cccc--cccccccCCCCcCcCCCCCCeEE--------------------CCEE--EcCCCCcCCCCccCCCCCCCCCCCC
Confidence 6431 1 122321 12100013322 2344 7888999998871 1112333
Q ss_pred -CCC-CCeecCCCeeECCCCceeCCCCccc
Q psy8491 173 -NCT-RGYCLEPNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 173 -~C~-nG~C~~~~~C~C~~Gy~G~~~~C~~ 200 (273)
+|. +|+|.. +.|.|++||+| ..|+.
T Consensus 566 ~~Cs~~G~C~~-g~C~C~~Gy~G--~~Ce~ 592 (687)
T 3k6s_B 566 VECSGRGRCRC-NVCECHSGYQL--PLCQE 592 (687)
T ss_dssp SBTSSSCCBCS-SCBCCSTTCCT--TTTCC
T ss_pred CCCCCCCcCCC-CEEECCCCCcC--CCCCC
Confidence 364 488986 88999999999 88876
No 13
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.69 E-value=2.7e-08 Score=79.65 Aligned_cols=83 Identities=27% Similarity=0.595 Sum_probs=61.2
Q ss_pred cccccCCCCceeeeCCCCeeCCCCCCCCCCC-CCCC-CCEEcC---CCeEEcCCCCeeCCCCCcc---cCC--CCCCC-c
Q psy8491 18 STSMSQDLRQAVICRFDLKFVNASYCAPVCS-SPCI-NGACVF---PEQCHCSPGFQFVNETYCE---PYC--ENCQH-G 86 (273)
Q Consensus 18 ~~~~~~~~~~~C~C~~Gy~~~~~~~C~~~C~-~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~---~~C--~~C~~-G 86 (273)
.+.++..++|.|.|++||.|.....=...|. .+|. ++.|++ .++|+|.+||+| ..|+ +.| ..|.+ |
T Consensus 19 g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G---~~C~~~~~~C~~~~C~~~g 95 (135)
T 2vj3_A 19 GKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEG---VHCEVNTDECASSPCLHNG 95 (135)
T ss_dssp CEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEES---SSSCEECCTTTTCCSTTTC
T ss_pred CEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcC---CcceecCCcccCCCcCCCC
Confidence 3678888999999999999753221112343 4577 789986 469999999999 6675 356 56775 8
Q ss_pred eecCC---CceeeCCCcccC
Q psy8491 87 TCTAP---SVCECESGFVHN 103 (273)
Q Consensus 87 ~C~~~---~~C~C~~Gy~g~ 103 (273)
+|++. ++|+|++||+|.
T Consensus 96 ~C~~~~g~~~C~C~~G~~G~ 115 (135)
T 2vj3_A 96 RCLDKINEFQCECPTGFTGH 115 (135)
T ss_dssp EEEECSSCEEEECCTTEESS
T ss_pred EeECCCCCeEEECCCCCcCC
Confidence 99753 489999999995
No 14
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.59 E-value=9.5e-08 Score=76.63 Aligned_cols=84 Identities=30% Similarity=0.589 Sum_probs=57.8
Q ss_pred cccccCC--CCceeeeCCCCeeCCCCC----------C--CCCCC-CCCC-CCEEc-------C---CCeEEcCCCCeeC
Q psy8491 18 STSMSQD--LRQAVICRFDLKFVNASY----------C--APVCS-SPCI-NGACV-------F---PEQCHCSPGFQFV 71 (273)
Q Consensus 18 ~~~~~~~--~~~~C~C~~Gy~~~~~~~----------C--~~~C~-~~C~-~g~C~-------~---~~~C~C~~Gy~g~ 71 (273)
.++++.. +++.|.|++||.|..... | ...|. .+|. ++.|+ + .++|+|.+||+|
T Consensus 12 g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G- 90 (143)
T 4d90_A 12 GICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNG- 90 (143)
T ss_dssp CEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEES-
T ss_pred CEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcC-
Confidence 3555544 689999999999754221 0 12233 3577 68998 2 579999999999
Q ss_pred CCCCcc---cCC--CCCCC-ceecCC---CceeeCCCcccCC
Q psy8491 72 NETYCE---PYC--ENCQH-GTCTAP---SVCECESGFVHNN 104 (273)
Q Consensus 72 ~~~~C~---~~C--~~C~~-G~C~~~---~~C~C~~Gy~g~~ 104 (273)
..|+ ++| ..|.+ ++|++. ++|+|++||+|+.
T Consensus 91 --~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 130 (143)
T 4d90_A 91 --IHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRN 130 (143)
T ss_dssp --TTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTT
T ss_pred --CCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCC
Confidence 6776 456 56775 899753 3899999999953
No 15
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.56 E-value=2.8e-08 Score=77.97 Aligned_cols=93 Identities=17% Similarity=0.443 Sum_probs=65.8
Q ss_pred ccccccccccccccC-CCCceeeeCCCCeeCCC--CCCCCCCC-CCCCCCEEcC--CCeEEcCCCCeeCCCCCcc--cCC
Q psy8491 9 DEYLLSVIQSTSMSQ-DLRQAVICRFDLKFVNA--SYCAPVCS-SPCINGACVF--PEQCHCSPGFQFVNETYCE--PYC 80 (273)
Q Consensus 9 ~~~~~~~~~~~~~~~-~~~~~C~C~~Gy~~~~~--~~C~~~C~-~~C~~g~C~~--~~~C~C~~Gy~g~~~~~C~--~~C 80 (273)
++|....|+++.+++ .++|.|.|++||.+... ..|...|. .+|. +.|++ .++|+|++||++.....|+ ++|
T Consensus 5 deC~~~pC~~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy~~~~g~~C~dideC 83 (118)
T 1dx5_I 5 DPCFRANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP-ADCDPNTQASCECPEGYILDDGFICTDIDEC 83 (118)
T ss_dssp CGGGGCCCSSEEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE-CEECTTSTTCEECCTTEEEETTTEEEECCHH
T ss_pred ccCCCCCCCCCCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCC-CcccCCCCeEeECCCCccCCCCCcccccccc
Confidence 556555678899999 89999999999998642 24443332 1222 55654 6899999999962236676 345
Q ss_pred ---CCCCCceecCC---CceeeCCCcccC
Q psy8491 81 ---ENCQHGTCTAP---SVCECESGFVHN 103 (273)
Q Consensus 81 ---~~C~~G~C~~~---~~C~C~~Gy~g~ 103 (273)
..| +++|++. +.|+|++||+++
T Consensus 84 ~~~~~C-~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 84 ENGGFC-SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp HHCSSC-SSEEEECSSSEEEEECSSSSCE
T ss_pred CCCCCC-cCeEEeCCCCEEEECCCCCccC
Confidence 467 7889753 489999999985
No 16
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.56 E-value=8.4e-08 Score=77.27 Aligned_cols=58 Identities=28% Similarity=0.761 Sum_probs=44.1
Q ss_pred CCCCCCC-CCEEcCCCeEEcCCCCeeC------CCCCcc--cCC-C----CCCC-ceecCC---CceeeCCCcccC
Q psy8491 46 VCSSPCI-NGACVFPEQCHCSPGFQFV------NETYCE--PYC-E----NCQH-GTCTAP---SVCECESGFVHN 103 (273)
Q Consensus 46 ~C~~~C~-~g~C~~~~~C~C~~Gy~g~------~~~~C~--~~C-~----~C~~-G~C~~~---~~C~C~~Gy~g~ 103 (273)
.|..+|. +++|++.++|+|.+||+|. ....|+ ++| . .|.+ ++|++. ++|.|++||+|.
T Consensus 4 ~C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~ 79 (143)
T 2bou_A 4 GCARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPV 79 (143)
T ss_dssp CCCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEET
T ss_pred CCcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccC
Confidence 3556677 8999999999999999983 235676 456 2 5874 899753 489999999995
No 17
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.48 E-value=2.6e-07 Score=73.77 Aligned_cols=92 Identities=26% Similarity=0.567 Sum_probs=60.1
Q ss_pred CCCC-CCEEcC---CCeEEcCCCCeeCCCCCcc---cCC--CCCCC-ceecCC---CceeeCCCcccCCCCCccccccC-
Q psy8491 49 SPCI-NGACVF---PEQCHCSPGFQFVNETYCE---PYC--ENCQH-GTCTAP---SVCECESGFVHNNETNACERICE- 114 (273)
Q Consensus 49 ~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~---~~C--~~C~~-G~C~~~---~~C~C~~Gy~g~~~~~~C~~~C~- 114 (273)
.+|. +|+|++ .++|+|.+||+| ..|+ ++| ..|.+ ++|++. ++|.|++||+|..+... ...|.
T Consensus 13 ~~C~~~g~C~~~~g~~~C~C~~Gy~G---~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~-~~~C~~ 88 (135)
T 2vj3_A 13 NPCEHAGKCINTLGSFECQCLQGYTG---PRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN-TDECAS 88 (135)
T ss_dssp CSSSTTCEEEECSSSEEEECCTTEES---TTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE-CCTTTT
T ss_pred CCCCCCCEeECCCCCEEEECCCCCcC---CcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceec-CCcccC
Confidence 4677 789986 469999999999 6675 456 56774 789753 48999999999532100 12343
Q ss_pred CCCCCCCCCeecCCCCceeeCCCCCcCCCCCCCCcccccCCCCeeeCCCC
Q psy8491 115 EPKPPLYPGLGTIPNTERTCLDNKCHCSEGDSNPYCIIQCDVGYTLNPRT 164 (273)
Q Consensus 115 ~~C~~~~~g~C~~~~~~C~C~~G~C~C~~~C~ng~C~~~C~~Gy~g~~c~ 164 (273)
.+|.+ +++|+.... ...| .|++||+|..|+
T Consensus 89 ~~C~~--~g~C~~~~g----------------~~~C--~C~~G~~G~~C~ 118 (135)
T 2vj3_A 89 SPCLH--NGRCLDKIN----------------EFQC--ECPTGFTGHLCQ 118 (135)
T ss_dssp CCSTT--TCEEEECSS----------------CEEE--ECCTTEESSSSC
T ss_pred CCcCC--CCEeECCCC----------------CeEE--ECCCCCcCCccC
Confidence 35655 566654321 0133 677889887664
No 18
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.48 E-value=3.4e-07 Score=73.34 Aligned_cols=46 Identities=26% Similarity=0.572 Sum_probs=34.0
Q ss_pred cCCCCeeeCCCCCCCCCCCC--CCCC-CeecC---CCeeECCCCceeCCCCcccc
Q psy8491 153 QCDVGYTLNPRTLYCEPECF--NCTR-GYCLE---PNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 153 ~C~~Gy~g~~c~~~C~~~C~--~C~n-G~C~~---~~~C~C~~Gy~G~~~~C~~~ 201 (273)
.|++||+|..|+. -+++|. +|.+ |+|+. .++|.|++||+| ..|+..
T Consensus 83 ~C~~G~~G~~C~~-~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G--~~c~~~ 134 (143)
T 4d90_A 83 KCPRGFNGIHCQH-NINECEVEPCKNGGICTDLVANYSCECPGEFMG--RNCQYK 134 (143)
T ss_dssp ECCTTEESTTSCE-ECCTTTTCCSCTTCEEEEETTEEEEECCTTCBS--TTSCBC
T ss_pred ECcCCCcCCCccc-CCCcCCCCCCCCCCEeECCCCCeEeECCCCCcc--CCceec
Confidence 7889999987751 124454 6765 79963 478999999999 776654
No 19
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.34 E-value=1.2e-09 Score=97.47 Aligned_cols=77 Identities=10% Similarity=0.097 Sum_probs=39.9
Q ss_pred CCCCC-ceecC---CCceeeCCCcccCCCCC---ccc--cccC-CCCCCCCCCeecCCCCceeeCCCCC--cCCCCCCC-
Q psy8491 81 ENCQH-GTCTA---PSVCECESGFVHNNETN---ACE--RICE-EPKPPLYPGLGTIPNTERTCLDNKC--HCSEGDSN- 147 (273)
Q Consensus 81 ~~C~~-G~C~~---~~~C~C~~Gy~g~~~~~---~C~--~~C~-~~C~~~~~g~C~~~~~~C~C~~G~C--~C~~~C~n- 147 (273)
.+|.+ |+|++ .++|+|++||+|..+.. +|+ +.|. .+|.+ ++.|+.... |. .. .++.+|.|
T Consensus 105 ~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~n--gg~c~~G~~-c~----~~i~c~~~~c~ng 177 (267)
T 4fbr_A 105 IKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHS--GGVWVLGTR-GK----QNVINVDAKSNDG 177 (267)
T ss_dssp EECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEE--EEEEECCSS-TT----SCEEEEEEECSST
T ss_pred CCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccC--Ccceecccc-cc----cccccCCCCCCCC
Confidence 45665 67753 45889999999853321 121 1122 13433 344433221 10 11 12334555
Q ss_pred Ccccc-------cCCCCeeeCCCC
Q psy8491 148 PYCII-------QCDVGYTLNPRT 164 (273)
Q Consensus 148 g~C~~-------~C~~Gy~g~~c~ 164 (273)
|+|++ .|++||+|..++
T Consensus 178 g~C~dg~~~y~C~Cp~Gf~G~~c~ 201 (267)
T 4fbr_A 178 GKTLSGTMTYNGEGPIGFRGTLTS 201 (267)
T ss_dssp TSEEEEEEEETTSCCEEEEEEEEE
T ss_pred CEeeCCCCCeEEeCCCCccccccc
Confidence 56666 888888887554
No 20
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.30 E-value=1.1e-07 Score=78.35 Aligned_cols=42 Identities=36% Similarity=0.816 Sum_probs=29.5
Q ss_pred cCCC--CeeeCCCCCCCC--CCCC----CCCCCeec---CCCeeECCCCceeC
Q psy8491 153 QCDV--GYTLNPRTLYCE--PECF----NCTRGYCL---EPNECSCPYNFHLE 194 (273)
Q Consensus 153 ~C~~--Gy~g~~c~~~C~--~~C~----~C~nG~C~---~~~~C~C~~Gy~G~ 194 (273)
.|++ ||+|+.....|+ ++|. +|++|+|+ +.|+|.|++||+|+
T Consensus 103 ~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~ 155 (162)
T 1uzk_A 103 LCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLN 155 (162)
T ss_dssp HCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBC
T ss_pred ECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCC
Confidence 5655 899875433333 4554 47778996 45899999999994
No 21
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.22 E-value=8.7e-07 Score=71.23 Aligned_cols=83 Identities=24% Similarity=0.606 Sum_probs=58.3
Q ss_pred ceeeeCCCCeeC------CCCCCC--CCCCC----CCC-CCEEcC---CCeEEcCCCCeeCC---------CCCcc--cC
Q psy8491 27 QAVICRFDLKFV------NASYCA--PVCSS----PCI-NGACVF---PEQCHCSPGFQFVN---------ETYCE--PY 79 (273)
Q Consensus 27 ~~C~C~~Gy~~~------~~~~C~--~~C~~----~C~-~g~C~~---~~~C~C~~Gy~g~~---------~~~C~--~~ 79 (273)
+.|.|++||++. +...|+ ..|.. +|. ++.|++ .|+|+|.+||+|.. ...|+ ++
T Consensus 19 ~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dide 98 (143)
T 2bou_A 19 TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDE 98 (143)
T ss_dssp SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCH
T ss_pred CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccC
Confidence 899999999984 234553 23432 587 689986 57999999999931 23666 34
Q ss_pred C----CCCCC-ceecCC---CceeeCCCcccCCCCCcc
Q psy8491 80 C----ENCQH-GTCTAP---SVCECESGFVHNNETNAC 109 (273)
Q Consensus 80 C----~~C~~-G~C~~~---~~C~C~~Gy~g~~~~~~C 109 (273)
| ..|.+ ++|++. +.|+|++||+|+.....|
T Consensus 99 C~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C 136 (143)
T 2bou_A 99 CSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNN 136 (143)
T ss_dssp HHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSS
T ss_pred ccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccC
Confidence 5 35764 899753 389999999996544444
No 22
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.21 E-value=2e-07 Score=89.32 Aligned_cols=72 Identities=32% Similarity=0.850 Sum_probs=34.9
Q ss_pred ceeeeCCCCeeCCCCCCCCCCCCCCCCCEEcCCCeEEcCCCCeeCCCCCcc-cCC-CCCCC-ceecCCCceeeCCCcccC
Q psy8491 27 QAVICRFDLKFVNASYCAPVCSSPCINGACVFPEQCHCSPGFQFVNETYCE-PYC-ENCQH-GTCTAPSVCECESGFVHN 103 (273)
Q Consensus 27 ~~C~C~~Gy~~~~~~~C~~~C~~~C~~g~C~~~~~C~C~~Gy~g~~~~~C~-~~C-~~C~~-G~C~~~~~C~C~~Gy~g~ 103 (273)
....|.++|.+.... .+.|..+|.||.|+.+++|+|.+||+| ..|+ +.| ..|.| |+|+.+++|.|.+||+|.
T Consensus 377 ~p~~C~~~~~g~~c~--~~~C~~~C~nG~C~~~~~C~C~~G~~G---~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~ 451 (463)
T 2wg3_C 377 MPEECRATVQPAQTL--TSECSRLCRNGYCTPTGKCCCSPGWEG---DFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGP 451 (463)
T ss_dssp SCGGGCCCCCCCCCC--CCHHHHHCCSEEECTTSCEEECTTEES---TTSCEECC-------------------------
T ss_pred ccccCCCCCcCCCCc--cccccCCCCCCccCCCCeECCCCCcCC---CcCCcCcCCCCCCCCCEECCCCEEECCCCcccC
Confidence 346777888765322 244555577889988889999999999 6676 567 67875 789888899999999984
No 23
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.19 E-value=2.7e-07 Score=74.67 Aligned_cols=97 Identities=22% Similarity=0.455 Sum_probs=60.1
Q ss_pred cccccccccc-ccccCCCCceeeeCCCCeeCC-CCCCCCCCCCCCC----CCEE-------------cC-----------
Q psy8491 9 DEYLLSVIQS-TSMSQDLRQAVICRFDLKFVN-ASYCAPVCSSPCI----NGAC-------------VF----------- 58 (273)
Q Consensus 9 ~~~~~~~~~~-~~~~~~~~~~C~C~~Gy~~~~-~~~C~~~C~~~C~----~g~C-------------~~----------- 58 (273)
++|...-|++ +++++.++|.|.|++||.+.. ...|...-...|. ++.| .+
T Consensus 5 deC~~~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C~ 84 (147)
T 2w86_A 5 DECESSPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCT 84 (147)
T ss_dssp CGGGGCCSBTSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTTE
T ss_pred ccCcCCCCCCCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCcc
Confidence 4555445653 788999999999999999854 2333221000010 1111 11
Q ss_pred --CCeEEcCCCCeeCCCCCcc--cCC----CCCCCceecCC---CceeeCCCcccCCC
Q psy8491 59 --PEQCHCSPGFQFVNETYCE--PYC----ENCQHGTCTAP---SVCECESGFVHNNE 105 (273)
Q Consensus 59 --~~~C~C~~Gy~g~~~~~C~--~~C----~~C~~G~C~~~---~~C~C~~Gy~g~~~ 105 (273)
.+.|+|.+||++.....|+ ++| ..|.||+|++. ++|.|++||+++..
T Consensus 85 ~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 85 LCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDAT 142 (147)
T ss_dssp ECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTT
T ss_pred cCCCcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCC
Confidence 1577899999742225676 345 23888899753 48999999998643
No 24
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.00 E-value=3.7e-06 Score=72.84 Aligned_cols=46 Identities=22% Similarity=0.436 Sum_probs=32.3
Q ss_pred cCCCC------eeeCCCC---CCCCCCCC-CCC-C--CeecCCCeeECCCCceeCCCCcccc
Q psy8491 153 QCDVG------YTLNPRT---LYCEPECF-NCT-R--GYCLEPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 153 ~C~~G------y~g~~c~---~~C~~~C~-~C~-n--G~C~~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
.|.+| |+|..|+ ..|...-. +|. + |+|.. +.|.|++||+| ..|+.+
T Consensus 157 ~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~-g~C~C~~G~~G--~~C~~~ 215 (217)
T 2p28_B 157 LCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEG--SACQHH 215 (217)
T ss_dssp EECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEET-TEEEECTTEES--TTSCEE
T ss_pred ECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC-CeeECCCCCcc--CCcCCC
Confidence 67778 7998876 23432211 363 4 89984 79999999999 888753
No 25
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.94 E-value=1.8e-06 Score=82.70 Aligned_cols=73 Identities=26% Similarity=0.519 Sum_probs=35.5
Q ss_pred EEcCCCCeeCCCCCcc-cCC-CCCCCceecCCCceeeCCCcccCCCCCccc-cccCCCCCCCCCCeecCCCCceeeCCCC
Q psy8491 62 CHCSPGFQFVNETYCE-PYC-ENCQHGTCTAPSVCECESGFVHNNETNACE-RICEEPKPPLYPGLGTIPNTERTCLDNK 138 (273)
Q Consensus 62 C~C~~Gy~g~~~~~C~-~~C-~~C~~G~C~~~~~C~C~~Gy~g~~~~~~C~-~~C~~~C~~~~~g~C~~~~~~C~C~~G~ 138 (273)
.+|.+||.| ..|+ +.| ..|.||.|+.+++|.|.+||+|+ .|+ +.|..+|.+ +|+|+..+. |
T Consensus 379 ~~C~~~~~g---~~c~~~~C~~~C~nG~C~~~~~C~C~~G~~G~----~C~~~~C~~~C~~--~g~C~~~~~-C------ 442 (463)
T 2wg3_C 379 EECRATVQP---AQTLTSECSRLCRNGYCTPTGKCCCSPGWEGD----FCRTAKCEPACRH--GGVCVRPNK-C------ 442 (463)
T ss_dssp GGGCCCCCC---CCCCCCHHHHHCCSEEECTTSCEEECTTEEST----TSCEECC-------------------------
T ss_pred ccCCCCCcC---CCCccccccCCCCCCccCCCCeECCCCCcCCC----cCCcCcCCCCCCC--CCEECCCCE-E------
Confidence 578889998 5565 456 56889999988899999999995 453 567667776 788876654 4
Q ss_pred CcCCCCCCCCcccccCCCCeeeCCCC
Q psy8491 139 CHCSEGDSNPYCIIQCDVGYTLNPRT 164 (273)
Q Consensus 139 C~C~~~C~ng~C~~~C~~Gy~g~~c~ 164 (273)
.|++||+|..|+
T Consensus 443 --------------~C~~G~~G~~C~ 454 (463)
T 2wg3_C 443 --------------LCKKGYLGPQCE 454 (463)
T ss_dssp --------------------------
T ss_pred --------------ECCCCcccCCCC
Confidence 566789887665
No 26
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.90 E-value=1.5e-06 Score=71.41 Aligned_cols=110 Identities=23% Similarity=0.302 Sum_probs=59.1
Q ss_pred cccccCCCCceeeeCCCCeeCC-CCCCCCC----CCC---CCC---CCEEcC-------CCeEEcCCCCeeCCCCCcccC
Q psy8491 18 STSMSQDLRQAVICRFDLKFVN-ASYCAPV----CSS---PCI---NGACVF-------PEQCHCSPGFQFVNETYCEPY 79 (273)
Q Consensus 18 ~~~~~~~~~~~C~C~~Gy~~~~-~~~C~~~----C~~---~C~---~g~C~~-------~~~C~C~~Gy~g~~~~~C~~~ 79 (273)
.+++++.++|.|.|++||.+.. ...|+.+ |.. +|. ++.|++ .++|.|.+||... ..|+
T Consensus 15 ~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~--~~C~-- 90 (162)
T 1uzk_A 15 GNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWG--TPCE-- 90 (162)
T ss_dssp SEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEET--TTTE--
T ss_pred CEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcC--CCcc--
Confidence 6788999999999999999753 5566533 321 121 556764 3678999999840 2332
Q ss_pred CCCCCCceecCCCceeeCC--CcccCCCCCccc--cccC---CCCCCCCCCeecCCC--CceeeCCC
Q psy8491 80 CENCQHGTCTAPSVCECES--GFVHNNETNACE--RICE---EPKPPLYPGLGTIPN--TERTCLDN 137 (273)
Q Consensus 80 C~~C~~G~C~~~~~C~C~~--Gy~g~~~~~~C~--~~C~---~~C~~~~~g~C~~~~--~~C~C~~G 137 (273)
.|.... ...+.|.|++ ||+++.....|+ ..|. .+|.+ +.|+... ..|.|++|
T Consensus 91 --~C~~~~-~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~---g~C~n~~gsy~C~C~~G 151 (162)
T 1uzk_A 91 --MCPAVN-TSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG---GKCINTFGSFQCRCPTG 151 (162)
T ss_dssp --ECCCTT-SHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT---SEEEECSSCEEEECCTT
T ss_pred --cCCCCC-CCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC---CEeEcCCCCEEeeCCCC
Confidence 111100 0123677766 777743222232 2332 23554 5675432 23777776
No 27
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.87 E-value=1.3e-05 Score=69.30 Aligned_cols=72 Identities=31% Similarity=0.674 Sum_probs=52.5
Q ss_pred CceeeeCCCCeeCCCCCCC----------CCCC-----CCCC-CCEEcCCCeEEcCCC------CeeCCCCCcc---cCC
Q psy8491 26 RQAVICRFDLKFVNASYCA----------PVCS-----SPCI-NGACVFPEQCHCSPG------FQFVNETYCE---PYC 80 (273)
Q Consensus 26 ~~~C~C~~Gy~~~~~~~C~----------~~C~-----~~C~-~g~C~~~~~C~C~~G------y~g~~~~~C~---~~C 80 (273)
.+.|.|.+||.|...+ |. ..|. .+|. +|.|+. ++|+|.+| |+| ..|+ ..|
T Consensus 106 ~g~C~C~~G~~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G---~~Ce~~~~~C 180 (217)
T 2p28_B 106 CGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYG---QYCECDTINC 180 (217)
T ss_dssp TTEEEECTTEESTTSC-EECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEES---TTSCEESSCS
T ss_pred CCEEECCCCccCCccc-ccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEEC---CCcccCCccC
Confidence 3689999999986532 11 1232 3576 899995 89999999 588 5665 345
Q ss_pred -C----CCC-C--ceecCCCceeeCCCcccC
Q psy8491 81 -E----NCQ-H--GTCTAPSVCECESGFVHN 103 (273)
Q Consensus 81 -~----~C~-~--G~C~~~~~C~C~~Gy~g~ 103 (273)
. .|. | |+|+. ++|.|.+||+|+
T Consensus 181 ~~~~g~~C~~~~~G~C~~-g~C~C~~G~~G~ 210 (217)
T 2p28_B 181 ERYNGQVCGGPGRGLCFC-GKCRCHPGFEGS 210 (217)
T ss_dssp CEETTEETTCTTTEEEET-TEEEECTTEEST
T ss_pred CCCCCCCCCCCCCcEEeC-CeeECCCCCccC
Confidence 2 375 5 89985 799999999995
No 28
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.87 E-value=1.5e-05 Score=58.15 Aligned_cols=54 Identities=31% Similarity=0.839 Sum_probs=30.1
Q ss_pred CCCCCCEEcC---CCeEEcCCCCeeCCCCCcc--cCC---CCCCCceecCC---CceeeCCCcccC
Q psy8491 49 SPCINGACVF---PEQCHCSPGFQFVNETYCE--PYC---ENCQHGTCTAP---SVCECESGFVHN 103 (273)
Q Consensus 49 ~~C~~g~C~~---~~~C~C~~Gy~g~~~~~C~--~~C---~~C~~G~C~~~---~~C~C~~Gy~g~ 103 (273)
.+|.++.|++ .|+|.|++||++ ....|+ ++| ..|.|++|++. +.|.|++||+|+
T Consensus 12 ~~C~~g~C~n~~g~y~C~C~~Gy~~-~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 12 DVCKHGQCINTDGSYRCECPFGYIL-AGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp TSCSSSEECCCSSCCCEECCTTEEE-ETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCC
T ss_pred CCcCCCEEEecCCCEEEECCCCeEC-CCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeC
Confidence 3455566664 466777777763 113444 234 24555666542 367777777764
No 29
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.83 E-value=7.3e-06 Score=61.16 Aligned_cols=68 Identities=29% Similarity=0.621 Sum_probs=46.0
Q ss_pred CceeeeCCCCeeCCCCCCC-CCCC-CCCCCCEEcCCCeEEcCCCCeeCCCCCcc----cCC--CCCCC-ceecC-----C
Q psy8491 26 RQAVICRFDLKFVNASYCA-PVCS-SPCINGACVFPEQCHCSPGFQFVNETYCE----PYC--ENCQH-GTCTA-----P 91 (273)
Q Consensus 26 ~~~C~C~~Gy~~~~~~~C~-~~C~-~~C~~g~C~~~~~C~C~~Gy~g~~~~~C~----~~C--~~C~~-G~C~~-----~ 91 (273)
+|.|.|.+||.|.. |. ..|. .+|.++ ...++|+|.+||+ .|+ +.| .+|.| |+|++ .
T Consensus 1 sy~C~C~~g~~g~~---c~~~~c~~~pC~n~--~~~y~C~C~~G~~-----~C~~~~~~~C~~~pC~ngg~C~~~~~~~~ 70 (91)
T 1tpg_A 1 SYQVICRDEKTQMI---YQQHQSWLRPVLRS--NRVEYCWCNSGRA-----QCHSVPVKSCSEPRCFNGGTCQQALYFSD 70 (91)
T ss_dssp CCCCCCBCSSSCCB---CCSSCEEEEECSSS--SCEEEEECSSSCC-----BCCEECEEECSSCCSCTTCEEEEESSSSC
T ss_pred CeeeECCCCCcCCe---ECCCcccCCccccC--CCCcEeECCCCCc-----ccccCcCCcccCCCCCCCCEeecCCCCCC
Confidence 58899999998742 32 1221 234433 2357899999997 353 346 56886 78963 3
Q ss_pred CceeeCCCcccC
Q psy8491 92 SVCECESGFVHN 103 (273)
Q Consensus 92 ~~C~C~~Gy~g~ 103 (273)
++|.|++||+|.
T Consensus 71 ~~C~C~~G~~G~ 82 (91)
T 1tpg_A 71 FVCQCPEGFAGK 82 (91)
T ss_dssp EEEECCTTCBSS
T ss_pred eEeECCCCCcCC
Confidence 489999999994
No 30
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.80 E-value=9.4e-06 Score=60.57 Aligned_cols=60 Identities=13% Similarity=0.100 Sum_probs=36.3
Q ss_pred CCeEEcCCCCeeCCCCCcc-cCC--CCCCCceecCCCceeeCCCcccCCCCCccccccC-CCCCCCCCCeecC
Q psy8491 59 PEQCHCSPGFQFVNETYCE-PYC--ENCQHGTCTAPSVCECESGFVHNNETNACERICE-EPKPPLYPGLGTI 127 (273)
Q Consensus 59 ~~~C~C~~Gy~g~~~~~C~-~~C--~~C~~G~C~~~~~C~C~~Gy~g~~~~~~C~~~C~-~~C~~~~~g~C~~ 127 (273)
+|+|.|.+||+| ..|. .+| .+|.|+ ...++|+|++||+ .+...=...|. .+|.+ +|.|+.
T Consensus 1 sy~C~C~~g~~g---~~c~~~~c~~~pC~n~--~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~n--gg~C~~ 64 (91)
T 1tpg_A 1 SYQVICRDEKTQ---MIYQQHQSWLRPVLRS--NRVEYCWCNSGRA--QCHSVPVKSCSEPRCFN--GGTCQQ 64 (91)
T ss_dssp CCCCCCBCSSSC---CBCCSSCEEEEECSSS--SCEEEEECSSSCC--BCCEECEEECSSCCSCT--TCEEEE
T ss_pred CeeeECCCCCcC---CeECCCcccCCccccC--CCCcEeECCCCCc--ccccCcCCcccCCCCCC--CCEeec
Confidence 378999999999 4555 334 345444 2235899999997 22100013344 36766 777764
No 31
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.76 E-value=1.8e-05 Score=57.69 Aligned_cols=67 Identities=27% Similarity=0.546 Sum_probs=45.7
Q ss_pred ccccc-cccc-cccccCCCCceeeeCCCCeeCCCCCCC--CCC--CCCCCCCEEcC---CCeEEcCCCCeeCCCCCc
Q psy8491 9 DEYLL-SVIQ-STSMSQDLRQAVICRFDLKFVNASYCA--PVC--SSPCINGACVF---PEQCHCSPGFQFVNETYC 76 (273)
Q Consensus 9 ~~~~~-~~~~-~~~~~~~~~~~C~C~~Gy~~~~~~~C~--~~C--~~~C~~g~C~~---~~~C~C~~Gy~g~~~~~C 76 (273)
++|.. ..|. .+.+++.++|.|.|++||.+. ...|+ ..| ..+|.+++|++ .|+|+|.+||+|.....|
T Consensus 6 deC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~-g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~~~~C 81 (82)
T 1emn_A 6 DECKEPDVCKHGQCINTDGSYRCECPFGYILA-GNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPMMTC 81 (82)
T ss_dssp CSSSSTTSCSSSEECCCSSCCCEECCTTEEEE-TTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCSSSCC
T ss_pred ccCCCCCCcCCCEEEecCCCEEEECCCCeECC-CCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeCCCCcc
Confidence 34442 3344 378889999999999999852 23443 223 24677789986 579999999999332344
No 32
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.75 E-value=3.9e-05 Score=63.22 Aligned_cols=46 Identities=24% Similarity=0.522 Sum_probs=30.2
Q ss_pred cCCCCeeeCCCCCCCCCCCC--CCCC-C------eecC-CCeeECCCCceeCCCCccc
Q psy8491 153 QCDVGYTLNPRTLYCEPECF--NCTR-G------YCLE-PNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 153 ~C~~Gy~g~~c~~~C~~~C~--~C~n-G------~C~~-~~~C~C~~Gy~G~~~~C~~ 200 (273)
+|++||+|..+...-...|. .|.+ | .|.. .+.|.|++||+| .+|+.
T Consensus 91 ~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G--~~Cd~ 146 (162)
T 1klo_A 91 RCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSG--RDCGT 146 (162)
T ss_dssp EECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEES--TTCCE
T ss_pred cCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcC--CCCCC
Confidence 68889999765411112233 3433 3 6765 589999999999 77764
No 33
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=97.73 E-value=7.3e-08 Score=85.92 Aligned_cols=164 Identities=9% Similarity=-0.121 Sum_probs=87.9
Q ss_pred ccCCCCceeeeCCCCeeCCCCCCCCC---CCCCCC-CCEEcC---CCeEEcCCCCeeCCCCCcc---cCC---CCCCCce
Q psy8491 21 MSQDLRQAVICRFDLKFVNASYCAPV---CSSPCI-NGACVF---PEQCHCSPGFQFVNETYCE---PYC---ENCQHGT 87 (273)
Q Consensus 21 ~~~~~~~~C~C~~Gy~~~~~~~C~~~---C~~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~---~~C---~~C~~G~ 87 (273)
.++.+.+++.+.||+.......+... +..+|. +|+|++ .|+|+|++||+| ..|+ ++| ..|....
T Consensus 7 ~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G---~~Ce~ni~ec~~~~~c~s~p 83 (267)
T 4fbr_A 7 QNQWGGSQATWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRG---TLSSANNYTVENQWGGTSAP 83 (267)
T ss_dssp EEECSSTTSCCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEE---EECSTTEEEEEEESSSTTSC
T ss_pred eecCCcccCCcCCCCceeeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCccc---ccccccccccccccCcCCCc
Confidence 45667888888888543332232211 222455 789986 689999999999 5565 232 1233344
Q ss_pred ecCCCceeeCCCcccCCCCCccccccC-CCCCCCCCCeecCC---CCceeeCCC----CC-----cCC--CCCCCCcccc
Q psy8491 88 CTAPSVCECESGFVHNNETNACERICE-EPKPPLYPGLGTIP---NTERTCLDN----KC-----HCS--EGDSNPYCII 152 (273)
Q Consensus 88 C~~~~~C~C~~Gy~g~~~~~~C~~~C~-~~C~~~~~g~C~~~---~~~C~C~~G----~C-----~C~--~~C~ng~C~~ 152 (273)
|.+.++| |.|..+. ...+|. .+|.+ +|+|+.. +. |.|++| .| +|. ..|..+.|.+
T Consensus 84 C~nggtc-----~~G~~c~--~~~eC~s~pC~n--gG~C~~~~~sy~-C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~n 153 (267)
T 4fbr_A 84 WQPGGVW-----VLGARDK--QNIVAVSIKSND--GGKTLTGTTTYN-GEGPIGFKSEVTDGDTYSVENQWGGSAAPWHS 153 (267)
T ss_dssp EEEEEEE-----ECCCCSS--CCEEEEEEECSS--TTSEEEEEEEET-TSCCEEEEEEECCCCEEEEEEECSSTTSCCEE
T ss_pred ccCCCee-----eccCccc--cccccCCCCCCC--CCEEecCCccEE-eeCCCCccccCCCCCcccccccCCcCCccccC
Confidence 4433333 2332111 112343 36766 8888653 34 888877 44 110 0111222221
Q ss_pred cCCCCeeeCCCCCCCCCCCC-CCCC-CeecC---CCeeECCCCceeCCCCcccc
Q psy8491 153 QCDVGYTLNPRTLYCEPECF-NCTR-GYCLE---PNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 153 ~C~~Gy~g~~c~~~C~~~C~-~C~n-G~C~~---~~~C~C~~Gy~G~~~~C~~~ 201 (273)
+..+|.|..++. ....+. +|++ |+|+. .|+|.||+||+| .+|+..
T Consensus 154 -gg~c~~G~~c~~-~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G--~~c~~~ 203 (267)
T 4fbr_A 154 -GGVWVLGTRGKQ-NVINVDAKSNDGGKTLSGTMTYNGEGPIGFRG--TLTSPD 203 (267)
T ss_dssp -EEEEECCSSTTS-CEEEEEEECSSTTSEEEEEEEETTSCCEEEEE--EEEETT
T ss_pred -Ccceeccccccc-ccccCCCCCCCCCEeeCCCCCeEEeCCCCccc--cccccc
Confidence 111234544431 111112 5655 79973 589999999999 777765
No 34
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.71 E-value=4.2e-05 Score=59.18 Aligned_cols=74 Identities=24% Similarity=0.664 Sum_probs=45.5
Q ss_pred CCCCC-CCEEcC---CCeEEcCCCCeeCCCCCccc-----CCC----CCCCceecCC---CceeeCCCcccCCCCCcccc
Q psy8491 48 SSPCI-NGACVF---PEQCHCSPGFQFVNETYCEP-----YCE----NCQHGTCTAP---SVCECESGFVHNNETNACER 111 (273)
Q Consensus 48 ~~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~~-----~C~----~C~~G~C~~~---~~C~C~~Gy~g~~~~~~C~~ 111 (273)
.+.|. +|+|++ .|+|.|.+||+| ..|+. +|. .|.+ +|++. +.|.|.+||++......|++
T Consensus 19 ~~~C~~~g~C~~~~~~y~C~C~~G~~G---~~C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~ 94 (114)
T 1aut_L 19 ASLCCGHGTCIDGIGSFSCDCRSGWEG---RFCQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHP 94 (114)
T ss_dssp SSTTTTSEEECCCSSCCCEEECTTEES---TTSCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred cccCCCcCCCCCCCCCcEeeCCCCCcC---CCcCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCCCccCc
Confidence 33455 788876 579999999999 55762 241 2322 78643 48999999998655566754
Q ss_pred ccCCCCCCCCCCeecC
Q psy8491 112 ICEEPKPPLYPGLGTI 127 (273)
Q Consensus 112 ~C~~~C~~~~~g~C~~ 127 (273)
.-..+|.+ ++.+++
T Consensus 95 ~~~~pC~~--~~~~i~ 108 (114)
T 1aut_L 95 AVKFPCGR--PWKRME 108 (114)
T ss_dssp CSSSCTTC--CC----
T ss_pred CcccCCCC--CCccCC
Confidence 43345655 455544
No 35
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=97.69 E-value=6.6e-05 Score=72.72 Aligned_cols=24 Identities=21% Similarity=0.426 Sum_probs=18.1
Q ss_pred CCCCceeeeCCCCeeCCCCCCCCC
Q psy8491 23 QDLRQAVICRFDLKFVNASYCAPV 46 (273)
Q Consensus 23 ~~~~~~C~C~~Gy~~~~~~~C~~~ 46 (273)
....+.|.|++||.|...+.|.+.
T Consensus 275 g~~~g~C~C~~G~~G~~Ce~C~~g 298 (525)
T 4aqs_A 275 GMVHGHCMCRHNTKGLNCELCMDF 298 (525)
T ss_dssp SCCCCEECCCTTEESSSSCEECTT
T ss_pred CCcCccccCcCCCcCCCCcCCCCc
Confidence 345678999999999877666543
No 36
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.69 E-value=2.9e-05 Score=77.00 Aligned_cols=98 Identities=26% Similarity=0.560 Sum_probs=60.6
Q ss_pred CCCCC-ceecCC----Cce-eeCCCcccCCCCCccc--cccCC-C--CCCCCCC---eecCCCCceeeCCCCCcCCCCCC
Q psy8491 81 ENCQH-GTCTAP----SVC-ECESGFVHNNETNACE--RICEE-P--KPPLYPG---LGTIPNTERTCLDNKCHCSEGDS 146 (273)
Q Consensus 81 ~~C~~-G~C~~~----~~C-~C~~Gy~g~~~~~~C~--~~C~~-~--C~~~~~g---~C~~~~~~C~C~~G~C~C~~~C~ 146 (273)
..|.+ ++|++. ++| .|++||+|+. ..|+ ..|.. + |.+ ++ +|+....
T Consensus 9 nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg--~~CeDiDEC~~~p~~C~~--gg~~~~CvNt~g---------------- 68 (634)
T 1yo8_A 9 NPCFPGAQCSSFPDGSWSCGFCPVGFLGNG--THCEDLDECALVPDICFS--TSKVPRCVNTQP---------------- 68 (634)
T ss_dssp CCSCTTCCEEECTTSCEEECCCCTTBCSCS--SSCCBCCTTTTSCCCSCC--CSSSCCEEECSS----------------
T ss_pred CCCCCCCEEecCCCCCeECCcCCCccCCCC--CCccccccccCCCCcccC--CccccceeeccC----------------
Confidence 45654 678642 478 8999998742 2453 23431 2 544 33 4433211
Q ss_pred CCccccc-CCCCeeeCCCC-----------CCCC--CCCC----CCCC-Ceec-------CCCeeECCCCceeCCCCccc
Q psy8491 147 NPYCIIQ-CDVGYTLNPRT-----------LYCE--PECF----NCTR-GYCL-------EPNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 147 ng~C~~~-C~~Gy~g~~c~-----------~~C~--~~C~----~C~n-G~C~-------~~~~C~C~~Gy~G~~~~C~~ 200 (273)
...| . |++||+|..++ ..|. .+|. +|.+ ++|+ +.|+|.|++||+|++..|+.
T Consensus 69 sY~C--~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 69 GFHC--LPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp SEEE--CCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEE
T ss_pred ceec--ccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCccccc
Confidence 0134 6 88999998653 2343 4564 6865 7996 34799999999998889974
No 37
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.63 E-value=8.7e-06 Score=63.52 Aligned_cols=51 Identities=27% Similarity=0.855 Sum_probs=29.6
Q ss_pred CCCCCEEcC----CCeEEcCCCCeeC--CCCCcccCC--CCCCCceecC--CCceeeCCCccc
Q psy8491 50 PCINGACVF----PEQCHCSPGFQFV--NETYCEPYC--ENCQHGTCTA--PSVCECESGFVH 102 (273)
Q Consensus 50 ~C~~g~C~~----~~~C~C~~Gy~g~--~~~~C~~~C--~~C~~G~C~~--~~~C~C~~Gy~g 102 (273)
+|.+ +|++ .|+|+|.+||+|. +...|+..| ..|. +.|++ .+.|+|++||++
T Consensus 11 pC~~-~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~-~~C~~~~~y~C~C~~Gy~~ 71 (118)
T 1dx5_I 11 NCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP-ADCDPNTQASCECPEGYIL 71 (118)
T ss_dssp CCSS-EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE-CEECTTSTTCEECCTTEEE
T ss_pred CCCC-CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCC-CcccCCCCeEeECCCCccC
Confidence 4544 6754 3688899999882 122444333 2222 45544 347888888875
No 38
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.54 E-value=4.7e-05 Score=55.85 Aligned_cols=53 Identities=30% Similarity=0.762 Sum_probs=26.8
Q ss_pred CCCCEEcC---CCeEEcCCCCeeC--CCCCcc--cCC--C--CCCCceecCC---CceeeCCCcccC
Q psy8491 51 CINGACVF---PEQCHCSPGFQFV--NETYCE--PYC--E--NCQHGTCTAP---SVCECESGFVHN 103 (273)
Q Consensus 51 C~~g~C~~---~~~C~C~~Gy~g~--~~~~C~--~~C--~--~C~~G~C~~~---~~C~C~~Gy~g~ 103 (273)
|.++.|++ .|+|.|.+||++. ....|+ ++| . .|.+++|++. +.|.|++||+++
T Consensus 13 C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 13 CGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp TTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCC
T ss_pred CCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccC
Confidence 44455554 3566666666641 124454 234 1 2445666542 366666666664
No 39
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.46 E-value=0.00012 Score=72.53 Aligned_cols=93 Identities=24% Similarity=0.554 Sum_probs=63.2
Q ss_pred ccccccccc--ccccCCC-Ccee-eeCCCCeeCCCCCCC--CCCC-CC--CC-CC---EEcC---CCeEE-cCCCCeeCC
Q psy8491 10 EYLLSVIQS--TSMSQDL-RQAV-ICRFDLKFVNASYCA--PVCS-SP--CI-NG---ACVF---PEQCH-CSPGFQFVN 72 (273)
Q Consensus 10 ~~~~~~~~~--~~~~~~~-~~~C-~C~~Gy~~~~~~~C~--~~C~-~~--C~-~g---~C~~---~~~C~-C~~Gy~g~~ 72 (273)
+|...-|.+ ++++... +|.| .|++||+|. ...|+ ..|. .+ |. ++ +|++ .|+|. |++||+|..
T Consensus 5 eC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGd-g~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~ 83 (634)
T 1yo8_A 5 GCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGN-GTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQ 83 (634)
T ss_dssp GGGGCCSCTTCCEEECTTSCEEECCCCTTBCSC-SSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECC
T ss_pred ccCCCCCCCCCEEecCCCCCeECCcCCCccCCC-CCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCc
Confidence 444444553 6777764 5999 999999973 24554 2343 23 87 56 7986 57998 999999922
Q ss_pred ------------CCCcc--cCC----CCCCC-ceecCC-------CceeeCCCcccC
Q psy8491 73 ------------ETYCE--PYC----ENCQH-GTCTAP-------SVCECESGFVHN 103 (273)
Q Consensus 73 ------------~~~C~--~~C----~~C~~-G~C~~~-------~~C~C~~Gy~g~ 103 (273)
...|+ .+| ..|.+ ++|++. +.|.|++||+|+
T Consensus 84 c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~Gd 140 (634)
T 1yo8_A 84 PVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGD 140 (634)
T ss_dssp CEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEES
T ss_pred cccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCcccc
Confidence 22365 457 26874 789642 389999999985
No 40
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.44 E-value=4.9e-05 Score=61.17 Aligned_cols=22 Identities=45% Similarity=0.931 Sum_probs=18.7
Q ss_pred CCCCCCEEcC---CCeEEcCCCCee
Q psy8491 49 SPCINGACVF---PEQCHCSPGFQF 70 (273)
Q Consensus 49 ~~C~~g~C~~---~~~C~C~~Gy~g 70 (273)
.+|.||+|++ .|+|+|++||+|
T Consensus 10 ~pC~ng~C~n~~g~y~C~C~~G~~g 34 (147)
T 2w86_A 10 SPCINGVCKNSPGSFICECSSESTL 34 (147)
T ss_dssp CCSBTSEEEEETTEEEEECCTTEEE
T ss_pred CCCCCCEeECCCCCEEeECCCCccc
Confidence 4577889986 579999999999
No 41
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.36 E-value=8.3e-05 Score=54.53 Aligned_cols=55 Identities=20% Similarity=0.446 Sum_probs=40.8
Q ss_pred ccc-ccccCCCCceeeeCCCCeeC--CCCCCCCC--CC---CCCCCCEEcC---CCeEEcCCCCee
Q psy8491 16 IQS-TSMSQDLRQAVICRFDLKFV--NASYCAPV--CS---SPCINGACVF---PEQCHCSPGFQF 70 (273)
Q Consensus 16 ~~~-~~~~~~~~~~C~C~~Gy~~~--~~~~C~~~--C~---~~C~~g~C~~---~~~C~C~~Gy~g 70 (273)
|.+ +++++.++|.|.|++||.+. +...|+.+ |. ..|.++.|++ .|+|+|++||++
T Consensus 13 C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~ 78 (86)
T 1lmj_A 13 CGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQL 78 (86)
T ss_dssp TTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCC
T ss_pred CCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCccc
Confidence 543 78889999999999999964 24455422 22 1366789986 579999999999
No 42
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.23 E-value=9.5e-05 Score=56.75 Aligned_cols=11 Identities=45% Similarity=1.186 Sum_probs=0.0
Q ss_pred ceeeCCCcccC
Q psy8491 93 VCECESGFVHN 103 (273)
Q Consensus 93 ~C~C~~Gy~g~ 103 (273)
.|.|++||+++
T Consensus 90 ~C~C~~Gy~~~ 100 (107)
T 2w2n_E 90 KCQCEEGFQLD 100 (107)
T ss_dssp -----------
T ss_pred EEECCCCceEC
Confidence 55555555553
No 43
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.14 E-value=0.0004 Score=57.12 Aligned_cols=17 Identities=6% Similarity=-0.083 Sum_probs=12.2
Q ss_pred CCcee-eeCCCCeeCCCC
Q psy8491 25 LRQAV-ICRFDLKFVNAS 41 (273)
Q Consensus 25 ~~~~C-~C~~Gy~~~~~~ 41 (273)
+.++| .|++||.|...+
T Consensus 16 g~~~C~~C~~g~~G~~Ce 33 (162)
T 1klo_A 16 KEVVCTHCPTGTAGKRCE 33 (162)
T ss_dssp CCEEECSCCTTEESTTSC
T ss_pred CCEEeCCCCCCCcCCCCc
Confidence 56788 688998875433
No 44
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.08 E-value=0.00058 Score=55.12 Aligned_cols=59 Identities=31% Similarity=0.912 Sum_probs=42.1
Q ss_pred CCCC-CCEEcC---CCeEEcCCCCeeCCCCCcc--cCC----CCCCCcee-cC---CCceeeCCCcccCCCCCcccc
Q psy8491 49 SPCI-NGACVF---PEQCHCSPGFQFVNETYCE--PYC----ENCQHGTC-TA---PSVCECESGFVHNNETNACER 111 (273)
Q Consensus 49 ~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~--~~C----~~C~~G~C-~~---~~~C~C~~Gy~g~~~~~~C~~ 111 (273)
.+|. +|.|++ .|+|.|.+||+| ..|+ +.| ..|.+ +| ++ .+.|.|++||++......|+.
T Consensus 54 ~pC~n~g~C~~~~~~y~C~C~~G~~G---~~C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 54 NPCLNGGLCKDDINSYECWCQVGFEG---KNCELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp CSSCTTCEEEECSSCEEEECCSSEES---TTTCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSEEE
T ss_pred CCCCCCCEeECCCCCEEEecCCCCcC---CcCCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcCCC
Confidence 4687 689986 579999999999 6676 345 13545 78 54 358999999996444445654
No 45
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.02 E-value=0.00064 Score=52.37 Aligned_cols=57 Identities=25% Similarity=0.522 Sum_probs=39.8
Q ss_pred cccccCCCCceeeeCCCCeeCCCCCCCC-----CCCC---CCCCCEEcC---CCeEEcCCCCee-CCCCCccc
Q psy8491 18 STSMSQDLRQAVICRFDLKFVNASYCAP-----VCSS---PCINGACVF---PEQCHCSPGFQF-VNETYCEP 78 (273)
Q Consensus 18 ~~~~~~~~~~~C~C~~Gy~~~~~~~C~~-----~C~~---~C~~g~C~~---~~~C~C~~Gy~g-~~~~~C~~ 78 (273)
.++++..++|.|.|++||.|.. |+. .|.. .|.+ +|++ .|+|+|.+||++ .+...|++
T Consensus 26 g~C~~~~~~y~C~C~~G~~G~~---C~~~~~~~~C~~~~~~C~~-~C~n~~g~y~C~C~~G~~~~~~g~~C~~ 94 (114)
T 1aut_L 26 GTCIDGIGSFSCDCRSGWEGRF---CQREVSFLNCSLDNGGCTH-YCLEEVGWRRCSCAPGYKLGDDLLQCHP 94 (114)
T ss_dssp EEECCCSSCCCEEECTTEESTT---SCEECCSSSSSSGGGGCSS-EEEECSSSEEEECCTTEEECTTSSCEEE
T ss_pred CCCCCCCCCcEeeCCCCCcCCC---cCcCCcCCcCcCCCCCCCC-EeECCCCCEEeECCCCeeECCCCCccCc
Confidence 4577888999999999999754 432 2321 2322 7875 579999999998 44456663
No 46
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.58 E-value=0.00075 Score=53.56 Aligned_cols=66 Identities=32% Similarity=0.760 Sum_probs=22.5
Q ss_pred CCCC-CCEEcC---CCeEEcCCCCeeCCCCCccc----CC----CCCCCceecCC---CceeeCCCcccCCCCCcccccc
Q psy8491 49 SPCI-NGACVF---PEQCHCSPGFQFVNETYCEP----YC----ENCQHGTCTAP---SVCECESGFVHNNETNACERIC 113 (273)
Q Consensus 49 ~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~~----~C----~~C~~G~C~~~---~~C~C~~Gy~g~~~~~~C~~~C 113 (273)
.+|. +|.|++ .|+|.|.+||+| ..|+. .| ..|.+ +|++. +.|.|.+||++......|+..-
T Consensus 48 ~pC~n~g~C~~~~~~y~C~C~~G~~G---~~C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 48 SPCQNQGKCKDGLGEYTCTCLEGFEG---KNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp ------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCCcCCcccCCCCEEeeCCCCccC---CccccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCCCccCcCC
Confidence 4577 588976 579999999999 55652 25 13555 78643 4899999999543334565433
Q ss_pred CCCCC
Q psy8491 114 EEPKP 118 (273)
Q Consensus 114 ~~~C~ 118 (273)
..+|.
T Consensus 124 ~~pC~ 128 (134)
T 2vh0_B 124 PYPCG 128 (134)
T ss_dssp SSCTT
T ss_pred CcCCC
Confidence 33443
No 47
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.57 E-value=0.00073 Score=57.41 Aligned_cols=67 Identities=31% Similarity=0.746 Sum_probs=23.5
Q ss_pred CCCC-CCEEcC---CCeEEcCCCCeeCCCCCccc----CC----CCCCCceecCC---CceeeCCCcccCCCCCcccccc
Q psy8491 49 SPCI-NGACVF---PEQCHCSPGFQFVNETYCEP----YC----ENCQHGTCTAP---SVCECESGFVHNNETNACERIC 113 (273)
Q Consensus 49 ~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~~----~C----~~C~~G~C~~~---~~C~C~~Gy~g~~~~~~C~~~C 113 (273)
.+|. +|.|++ .|+|.|.+||+| ..|+. .| ..|.+ .|++. +.|.|.+||++......|+..-
T Consensus 48 ~pC~ngg~C~n~~g~y~C~C~~Gf~G---~~Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 48 SPCQNQGKCKDGLGEYTCTCLEGFEG---KNCELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp ------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCCCCEeECCCCCeeEeCCCCcee---ccccccccccccCCCCCCCC-EeECCCCCeEEECCCCceeCCCCCccccCC
Confidence 4687 688986 589999999999 55652 25 24655 78642 4899999999543334565433
Q ss_pred CCCCCC
Q psy8491 114 EEPKPP 119 (273)
Q Consensus 114 ~~~C~~ 119 (273)
..+|.+
T Consensus 124 ~~PC~~ 129 (195)
T 1nfu_B 124 PYPCGK 129 (195)
T ss_dssp SSCTTC
T ss_pred CCCCCC
Confidence 334544
No 48
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=96.55 E-value=0.0016 Score=52.46 Aligned_cols=66 Identities=18% Similarity=0.463 Sum_probs=43.9
Q ss_pred cccccccccc--ccccCCCCceeeeCCCCeeCCCCCCC--CCCCC---CCCCCEE-cC---CCeEEcCCCCee-CCCCCc
Q psy8491 9 DEYLLSVIQS--TSMSQDLRQAVICRFDLKFVNASYCA--PVCSS---PCINGAC-VF---PEQCHCSPGFQF-VNETYC 76 (273)
Q Consensus 9 ~~~~~~~~~~--~~~~~~~~~~C~C~~Gy~~~~~~~C~--~~C~~---~C~~g~C-~~---~~~C~C~~Gy~g-~~~~~C 76 (273)
++|....|++ ++++..++|.|.|++||.|.. |. ..|.. +|.+ .| ++ .|+|.|.+||++ .+...|
T Consensus 49 deC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~deC~~~~~~C~~-~C~~n~~g~y~C~C~~Gy~l~~dG~~C 124 (146)
T 1x7a_L 49 DQCEPNPCLNGGLCKDDINSYECWCQVGFEGKN---CELDATCNIKNGRCKQ-FCKTGADSKVLCSCTTGYRLAPDQKSC 124 (146)
T ss_dssp -CCSSCSSCTTCEEEECSSCEEEECCSSEESTT---TCEECCTTSGGGSCSS-BCCCCSSSCCCCBCCTTEEECTTSSSE
T ss_pred CcCCCCCCCCCCEeECCCCCEEEecCCCCcCCc---CCCCccccCCCCCCcC-CCCCCCCCCEEeEcCCCcEeCCCCCcC
Confidence 3454444654 788889999999999999743 32 22321 3434 67 54 689999999996 333667
Q ss_pred cc
Q psy8491 77 EP 78 (273)
Q Consensus 77 ~~ 78 (273)
++
T Consensus 125 ~~ 126 (146)
T 1x7a_L 125 KP 126 (146)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 49
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=96.46 E-value=0.0016 Score=43.96 Aligned_cols=31 Identities=29% Similarity=0.590 Sum_probs=24.5
Q ss_pred CCCC--CCCC-Ceec--------CCCeeECCCCceeCCCCcccc
Q psy8491 169 PECF--NCTR-GYCL--------EPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 169 ~~C~--~C~n-G~C~--------~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
++|. +|+| |+|. ..|.|.|++||+| .+||..
T Consensus 9 ~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G--~~CE~~ 50 (55)
T 3u7u_G 9 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTG--DRCQNY 50 (55)
T ss_dssp CSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEES--TTSCEE
T ss_pred CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcC--CCcCcc
Confidence 3455 8888 7993 2479999999999 999864
No 50
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=96.37 E-value=0.0049 Score=59.48 Aligned_cols=46 Identities=17% Similarity=0.298 Sum_probs=27.4
Q ss_pred cCCCCeeeCCCCC--CCCC-CCC---CCCC-CeecC-CCeeECCCCceeCCCCccc
Q psy8491 153 QCDVGYTLNPRTL--YCEP-ECF---NCTR-GYCLE-PNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 153 ~C~~Gy~g~~c~~--~C~~-~C~---~C~n-G~C~~-~~~C~C~~Gy~G~~~~C~~ 200 (273)
.|++||+|..+.. .|.+ .|. .|.+ +.|.. .+.|.|++||+| ..|+.
T Consensus 422 ~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G--~~Ce~ 475 (525)
T 4aqs_A 422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTG--QRCDQ 475 (525)
T ss_dssp EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCS--TTTCC
T ss_pred CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcC--CCccc
Confidence 6778888765442 1221 121 1222 34542 478999999999 88864
No 51
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.36 E-value=0.004 Score=45.46 Aligned_cols=11 Identities=27% Similarity=1.192 Sum_probs=5.8
Q ss_pred CeEEcCCCCee
Q psy8491 60 EQCHCSPGFQF 70 (273)
Q Consensus 60 ~~C~C~~Gy~g 70 (273)
|+|+|++||++
T Consensus 25 y~C~C~~G~~~ 35 (87)
T 1z6c_A 25 FECECPEGYRY 35 (87)
T ss_dssp CCCSSSTTCEE
T ss_pred EEEECCCCceE
Confidence 45555555553
No 52
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.36 E-value=0.0038 Score=45.58 Aligned_cols=52 Identities=19% Similarity=0.384 Sum_probs=35.0
Q ss_pred ccccccCCCCceeeeCCCCeeCC-CCCCCCC--CC-CCCCCCEEcC---CCeEEcCCCCee
Q psy8491 17 QSTSMSQDLRQAVICRFDLKFVN-ASYCAPV--CS-SPCINGACVF---PEQCHCSPGFQF 70 (273)
Q Consensus 17 ~~~~~~~~~~~~C~C~~Gy~~~~-~~~C~~~--C~-~~C~~g~C~~---~~~C~C~~Gy~g 70 (273)
..+++++.++|.|.|++||++.. ...|+.+ |. .+|. +.|++ .|+|+|+ ||.|
T Consensus 15 ~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~-~~C~n~~g~y~C~C~-g~~G 73 (87)
T 1z6c_A 15 TAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA-QLCVNYPGGYTCYCD-GKKG 73 (87)
T ss_dssp TSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS-SEECCCSSSCCEECC-SSSC
T ss_pred CCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC-CEEEccCCCEEEECC-CCcC
Confidence 45778888999999999999643 3445322 21 3454 67875 5789995 4444
No 53
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=96.32 E-value=0.0015 Score=49.86 Aligned_cols=54 Identities=22% Similarity=0.555 Sum_probs=23.0
Q ss_pred cccccccCCCCceeeeCCCCeeCCCCCCCC--CCC--CCCCCCEEcC---CCeEEcCCCCee
Q psy8491 16 IQSTSMSQDLRQAVICRFDLKFVNASYCAP--VCS--SPCINGACVF---PEQCHCSPGFQF 70 (273)
Q Consensus 16 ~~~~~~~~~~~~~C~C~~Gy~~~~~~~C~~--~C~--~~C~~g~C~~---~~~C~C~~Gy~g 70 (273)
|.+++++..++|.|.|++||.+.+...|+. .|. .+|. +.|++ .|+|.|.+||++
T Consensus 39 C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~-~~C~n~~gsy~C~C~~Gy~~ 99 (107)
T 2w2n_E 39 CSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL 99 (107)
T ss_dssp CSSEEECCSBSCEEECCTTCEEETTTEEEC--------------------------------
T ss_pred CCCEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC-CeeecCCCCEEEECCCCceE
Confidence 445788888999999999999865555542 232 3454 67775 589999999998
No 54
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.24 E-value=0.0014 Score=55.62 Aligned_cols=73 Identities=23% Similarity=0.397 Sum_probs=24.0
Q ss_pred cccccccccc--ccccCCCCceeeeCCCCeeCCCCCCCC----CCC---CCCCCCEEcC---CCeEEcCCCCee-CCCCC
Q psy8491 9 DEYLLSVIQS--TSMSQDLRQAVICRFDLKFVNASYCAP----VCS---SPCINGACVF---PEQCHCSPGFQF-VNETY 75 (273)
Q Consensus 9 ~~~~~~~~~~--~~~~~~~~~~C~C~~Gy~~~~~~~C~~----~C~---~~C~~g~C~~---~~~C~C~~Gy~g-~~~~~ 75 (273)
++|....|++ ++++..++|.|.|++||.|.. |.. .|. .+|.+ .|++ .|+|.|.+||++ .++..
T Consensus 43 deC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~---Ce~~i~deC~~~~~~C~~-~C~n~~gsy~C~C~~Gy~l~~dG~~ 118 (195)
T 1nfu_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKA 118 (195)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSC
T ss_pred cccCCCCCCCCCEeECCCCCeeEeCCCCceecc---ccccccccccCCCCCCCC-EeECCCCCeEEECCCCceeCCCCCc
Confidence 4555455665 788888999999999999743 422 243 23555 7875 578999999995 23367
Q ss_pred cccCC-CCCCC
Q psy8491 76 CEPYC-ENCQH 85 (273)
Q Consensus 76 C~~~C-~~C~~ 85 (273)
|+.+- .+|.+
T Consensus 119 C~~~~~~PC~~ 129 (195)
T 1nfu_B 119 CIPTGPYPCGK 129 (195)
T ss_dssp EEESSSSCTTC
T ss_pred cccCCCCCCCC
Confidence 77432 34443
No 55
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.23 E-value=0.0039 Score=57.85 Aligned_cols=62 Identities=21% Similarity=0.538 Sum_probs=45.5
Q ss_pred ccccccccCCCCceeeeCCCCeeCCCCCCCC--CCC--CCCCCCEEcC---CCeEEcCCCCee-CCCCCcc
Q psy8491 15 VIQSTSMSQDLRQAVICRFDLKFVNASYCAP--VCS--SPCINGACVF---PEQCHCSPGFQF-VNETYCE 77 (273)
Q Consensus 15 ~~~~~~~~~~~~~~C~C~~Gy~~~~~~~C~~--~C~--~~C~~g~C~~---~~~C~C~~Gy~g-~~~~~C~ 77 (273)
.|.++++++.++|.|.|++||++.+...|+. .|. .+|.+ .|++ .|.|.|.+||++ .+...|.
T Consensus 9 ~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~-~C~n~~g~~~C~C~~g~~~~~~~~~C~ 78 (400)
T 3p5b_L 9 GCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKACK 78 (400)
T ss_dssp GCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS-CCBCCSSSCBCCCCTTCCCCTTTSSCC
T ss_pred CCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC-ccCCCccceeeecccccccccccccee
Confidence 4678899999999999999999765566642 343 34544 6765 589999999998 3445564
No 56
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.05 E-value=0.0061 Score=48.63 Aligned_cols=59 Identities=29% Similarity=0.692 Sum_probs=40.0
Q ss_pred CCCC-CCEEcC---CCeEEcCCCCeeCCCCCccc---CCC--CCCC-c---eecC----CCceeeCCCcccCCCCCccc
Q psy8491 49 SPCI-NGACVF---PEQCHCSPGFQFVNETYCEP---YCE--NCQH-G---TCTA----PSVCECESGFVHNNETNACE 110 (273)
Q Consensus 49 ~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~~---~C~--~C~~-G---~C~~----~~~C~C~~Gy~g~~~~~~C~ 110 (273)
.+|. +|+|++ .|+|.|.+||+| ..|+. .|. .+.+ + +|++ .+.|.|.+||++......|+
T Consensus 53 ~pC~n~g~C~~~~g~y~C~C~~G~~G---~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 53 SPCQNGGSCKDQLQSYICFCLPAFEG---RNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 128 (142)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTEES---TTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEE
T ss_pred CCcCCCCEEeCCCCCEEeeCCCCccC---CccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCC
Confidence 4687 689986 579999999999 66762 231 2223 3 7864 34899999999644334554
No 57
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=96.03 E-value=0.0074 Score=54.01 Aligned_cols=68 Identities=13% Similarity=0.333 Sum_probs=35.5
Q ss_pred cccccccccc--ccccCCCCceeeeCCCCeeCCCCCCCCCCC----CCCCCCEEcC---CCeEEcCCCCee-CCCCCcc
Q psy8491 9 DEYLLSVIQS--TSMSQDLRQAVICRFDLKFVNASYCAPVCS----SPCINGACVF---PEQCHCSPGFQF-VNETYCE 77 (273)
Q Consensus 9 ~~~~~~~~~~--~~~~~~~~~~C~C~~Gy~~~~~~~C~~~C~----~~C~~g~C~~---~~~C~C~~Gy~g-~~~~~C~ 77 (273)
++|....|.+ ++++..+++.|.|++||.|.....=...|. .+|.+ .|++ .++|.|.+||++ .+...|.
T Consensus 6 ~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~~~~~C~ 83 (317)
T 3h5c_B 6 SPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCV 83 (317)
T ss_dssp CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCTTSSCCE
T ss_pred CcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccccccccccc
Confidence 3343333443 455666677777777777532210012232 24555 6664 467777777777 3334454
No 58
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.01 E-value=0.004 Score=52.32 Aligned_cols=32 Identities=38% Similarity=0.885 Sum_probs=26.2
Q ss_pred CCCC-CCCC-CeecCCCeeECCCCceeCCCCccccC
Q psy8491 169 PECF-NCTR-GYCLEPNECSCPYNFHLEGGMCMIAE 202 (273)
Q Consensus 169 ~~C~-~C~n-G~C~~~~~C~C~~Gy~G~~~~C~~~~ 202 (273)
+.|. +|.| |.|++++.|.|++||+| ..|+...
T Consensus 149 ~~C~~~C~ngG~Cv~P~~C~C~~Gw~G--~~C~~~~ 182 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERRICECPDGFHG--PHCEGTK 182 (188)
T ss_dssp CCCTTCCCTTCEECTTSCEECCTTCBT--TTTCBC-
T ss_pred CccCCCCCCCCEeCCCCcccCcCCCCC--CCCcCCc
Confidence 4555 6767 79999999999999999 8888653
No 59
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=95.98 E-value=0.0057 Score=54.78 Aligned_cols=58 Identities=36% Similarity=0.986 Sum_probs=42.3
Q ss_pred CCCC-CCEEcC---CCeEEcCCCCeeCCCCCcc---cCC-----CCCCCceecCC---CceeeCCCcccCCCCCccc
Q psy8491 49 SPCI-NGACVF---PEQCHCSPGFQFVNETYCE---PYC-----ENCQHGTCTAP---SVCECESGFVHNNETNACE 110 (273)
Q Consensus 49 ~~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~---~~C-----~~C~~G~C~~~---~~C~C~~Gy~g~~~~~~C~ 110 (273)
.+|. +|.|.+ .++|.|.+||+| ..|+ ++| ..|.| .|++. +.|.|.+||++......|.
T Consensus 11 ~pC~~~g~C~~~~~~~~C~C~~g~~g---~~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~C~C~~g~~~~~~~~~C~ 83 (317)
T 3h5c_B 11 QPCLHNGSCQDSIWGYTCTCSPGYEG---SNCELAKNECHPERTDGCQH-FCLPGQESYTCSCAQGYRLGEDHKQCV 83 (317)
T ss_dssp CCCTTTCCCCCCSSSCCCCCSSSCCS---SSSCCCSSSCCTTCTTSCSS-EEECCSSSCEEECCTTEECCTTSSCCE
T ss_pred CCCCCCCEeECCCCCeEEECCCCCcC---CccccCcccCCCCCCCCCcC-ccccCCCeeEEeccccccccccccccc
Confidence 4577 578875 589999999999 5665 345 24766 88753 5899999999965445554
No 60
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.91 E-value=0.019 Score=57.26 Aligned_cols=136 Identities=27% Similarity=0.690 Sum_probs=72.6
Q ss_pred CCCCEEcC-CCeE----EcCCCCeeCCCCCcc-cCC----CCCCCceecCC-Ccee----eCCCcccCCCCCccc--ccc
Q psy8491 51 CINGACVF-PEQC----HCSPGFQFVNETYCE-PYC----ENCQHGTCTAP-SVCE----CESGFVHNNETNACE--RIC 113 (273)
Q Consensus 51 C~~g~C~~-~~~C----~C~~Gy~g~~~~~C~-~~C----~~C~~G~C~~~-~~C~----C~~Gy~g~~~~~~C~--~~C 113 (273)
|.+|.|+. ..+| .|..|+-+ ..|. ..| ..|.+|.|+.. ..|. |..|.-.. .|. ..|
T Consensus 183 C~~g~Ci~~~~~CDg~~dC~dgsDE---~~C~~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsde~----~C~~~~~C 255 (699)
T 1n7d_A 183 CLSGECIHSSWRCDGGPDCKDKSDE---ENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEV----GCVNVTLC 255 (699)
T ss_dssp CSSSCCCSTTCTTSSSCCSTTSCSS---CSCCCCCCCSSEEESSSSCEEETTCCSSSCCCSSSSCSSS----STTCCCCC
T ss_pred cCCCceEechhccCCCCCCCCCccc---ccCCCcccCCCcEecCCCceeeeecccCCCCCCCCCCccC----CCCCCCcc
Confidence 44566664 3445 56666654 4454 244 25767888653 3554 66665432 342 234
Q ss_pred C----CCCCCCCCCeecCCCC----ceeeCCC------CC---c-------CCCCCCC--C--cccccCCCCeeeCCCCC
Q psy8491 114 E----EPKPPLYPGLGTIPNT----ERTCLDN------KC---H-------CSEGDSN--P--YCIIQCDVGYTLNPRTL 165 (273)
Q Consensus 114 ~----~~C~~~~~g~C~~~~~----~C~C~~G------~C---~-------C~~~C~n--g--~C~~~C~~Gy~g~~c~~ 165 (273)
. ..|.+ |.|+.... .+.|..| .| + |...|.| + .| .|++||++. .+.
T Consensus 256 ~~~~~~~C~~---g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C--~C~~G~~~~-~~~ 329 (699)
T 1n7d_A 256 EGPNKFKCHS---GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYEC--LCPDGFQLV-AQR 329 (699)
T ss_dssp CSTTCCCCTT---SCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCC--CCCSSSCCC-SSS
T ss_pred cCCCceecCC---CcEeCCcccccccceecCcccccccccccccccccccCcCCCcccCCCCcEE--eCCCCeEcC-CCC
Confidence 2 24655 67765432 1345544 12 1 2234443 1 45 999999962 223
Q ss_pred CCC--CCCC---CCCCCeec---CCCeeECCCCceeC--CCCccc
Q psy8491 166 YCE--PECF---NCTRGYCL---EPNECSCPYNFHLE--GGMCMI 200 (273)
Q Consensus 166 ~C~--~~C~---~C~nG~C~---~~~~C~C~~Gy~G~--~~~C~~ 200 (273)
.|. .+|. +|. +.|+ +.|+|.|++||+++ +..|..
T Consensus 330 ~C~dideC~~~~~C~-~~C~n~~g~y~C~C~~G~~~~~~~~~C~~ 373 (699)
T 1n7d_A 330 RCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKACKA 373 (699)
T ss_dssp CCCCCCCCSSSSSCT-TTCCBCSSCBCCCCCSSCBCCSSCCCCBC
T ss_pred cccCccccCCCCccc-cccccCCCCeeeeeecccccCCCCCcccc
Confidence 443 3454 342 2454 45899999999974 346764
No 61
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.88 E-value=0.0051 Score=51.68 Aligned_cols=26 Identities=31% Similarity=0.751 Sum_probs=15.9
Q ss_pred CCCCCCCC-CCEEcCCCeEEcCCCCee
Q psy8491 45 PVCSSPCI-NGACVFPEQCHCSPGFQF 70 (273)
Q Consensus 45 ~~C~~~C~-~g~C~~~~~C~C~~Gy~g 70 (273)
++|.+.|. +|.|+++++|+|++||+|
T Consensus 149 ~~C~~~C~ngG~Cv~P~~C~C~~Gw~G 175 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERRICECPDGFHG 175 (188)
T ss_dssp CCCTTCCCTTCEECTTSCEECCTTCBT
T ss_pred CccCCCCCCCCEeCCCCcccCcCCCCC
Confidence 45555565 456666666666666666
No 62
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=95.86 E-value=0.0027 Score=41.10 Aligned_cols=27 Identities=26% Similarity=0.603 Sum_probs=22.4
Q ss_pred CCCCCeecC-----CCeeECCCCceeCCCCcccc
Q psy8491 173 NCTRGYCLE-----PNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~nG~C~~-----~~~C~C~~Gy~G~~~~C~~~ 201 (273)
+|+||+|.. .+.|.|++||+| .+|+..
T Consensus 13 pC~nG~C~~~~~~~~~~C~C~~GytG--~~Ce~~ 44 (46)
T 1k36_A 13 YCLHGQCIYLVDMSQNYCRCEVGYTG--VRCEHF 44 (46)
T ss_dssp SCSSEEEEEETTTTEEEEEECTTCSS--TTSCCC
T ss_pred CCCCCEeeccCCCCCEEEECCCCCcc--CCCCcc
Confidence 687899962 478999999999 888864
No 63
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=95.86 E-value=0.0028 Score=50.16 Aligned_cols=65 Identities=23% Similarity=0.403 Sum_probs=20.4
Q ss_pred ccccccccc--ccccCCCCceeeeCCCCeeCCCCCCCC----CCC---CCCCCCEEcC---CCeEEcCCCCee-CCCCCc
Q psy8491 10 EYLLSVIQS--TSMSQDLRQAVICRFDLKFVNASYCAP----VCS---SPCINGACVF---PEQCHCSPGFQF-VNETYC 76 (273)
Q Consensus 10 ~~~~~~~~~--~~~~~~~~~~C~C~~Gy~~~~~~~C~~----~C~---~~C~~g~C~~---~~~C~C~~Gy~g-~~~~~C 76 (273)
+|....|++ ++++..++|.|.|++||.|.. |.. .|. .+|.+ .|++ .|+|.|.+||++ .+...|
T Consensus 44 ~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~i~d~C~~~~~~C~~-~C~~~~g~y~C~C~~Gy~l~~~g~~C 119 (134)
T 2vh0_B 44 QCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN---CELFTRKLCSLDNGDCDQ-FCHEEQNSVVCSCARGYTLADNGKAC 119 (134)
T ss_dssp ----------------------------------------CCGGGTGGGGCSS-EEEEETTEEEEECCTTEEECTTSSCE
T ss_pred cCCCCCCCCcCCcccCCCCEEeeCCCCccCCc---cccCCCCccccCCCCCCC-EeECCCCCEEEECCCCcEECCCCCcc
Confidence 444444554 778888999999999999743 322 132 23544 7875 478999999995 233667
Q ss_pred cc
Q psy8491 77 EP 78 (273)
Q Consensus 77 ~~ 78 (273)
++
T Consensus 120 ~~ 121 (134)
T 2vh0_B 120 IP 121 (134)
T ss_dssp EE
T ss_pred Cc
Confidence 63
No 64
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.83 E-value=0.0053 Score=37.80 Aligned_cols=26 Identities=35% Similarity=0.945 Sum_probs=20.8
Q ss_pred CCCC-CeecC---CCeeECCCCceeCCCCccc
Q psy8491 173 NCTR-GYCLE---PNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 173 ~C~n-G~C~~---~~~C~C~~Gy~G~~~~C~~ 200 (273)
+|+| |+|+. .+.|.|++||+| ..|+.
T Consensus 10 pC~ngg~C~~~~~~~~C~C~~G~~G--~~Ce~ 39 (39)
T 1edm_B 10 PCLNGGSCKDDINSYECWCPFGFEG--KNCEL 39 (39)
T ss_dssp CCCTTCEEEEETTEEEEECCTTCCS--TTSCC
T ss_pred CCCCCCEeEcCCCceEeECCCCCcC--CccCC
Confidence 6766 79973 479999999999 77763
No 65
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=95.75 E-value=0.0067 Score=48.39 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=43.6
Q ss_pred cccccccccc--ccccCCCCceeeeCCCCeeCCCCCCCC---CCC-CCCC-CC---EEcC----CCeEEcCCCCee-CCC
Q psy8491 9 DEYLLSVIQS--TSMSQDLRQAVICRFDLKFVNASYCAP---VCS-SPCI-NG---ACVF----PEQCHCSPGFQF-VNE 73 (273)
Q Consensus 9 ~~~~~~~~~~--~~~~~~~~~~C~C~~Gy~~~~~~~C~~---~C~-~~C~-~g---~C~~----~~~C~C~~Gy~g-~~~ 73 (273)
++|....|++ ++++..++|.|.|++||.|.. |.. .|. -++. ++ .|++ .|+|.|.+||++ .+.
T Consensus 48 d~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~---C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG 124 (142)
T 2c4f_L 48 DQCASSPCQNGGSCKDQLQSYICFCLPAFEGRN---CETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124 (142)
T ss_dssp CGGGGCCCCTTCEEEEETTEEEEECCTTEESTT---SCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTS
T ss_pred CcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCc---cccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCC
Confidence 4555555665 788888999999999999743 432 111 1132 22 7864 579999999995 233
Q ss_pred CCcc
Q psy8491 74 TYCE 77 (273)
Q Consensus 74 ~~C~ 77 (273)
..|+
T Consensus 125 ~~C~ 128 (142)
T 2c4f_L 125 VSCT 128 (142)
T ss_dssp SCEE
T ss_pred CCCC
Confidence 5666
No 66
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=95.55 E-value=0.0058 Score=39.07 Aligned_cols=27 Identities=19% Similarity=0.603 Sum_probs=21.5
Q ss_pred CCCC-Ceec-----CCCeeECCCCceeCCCCcccc
Q psy8491 173 NCTR-GYCL-----EPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~n-G~C~-----~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
+|+| |+|+ +.+.|.|++||+| .+|+..
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G--~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSG--DRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEET--TTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcC--CcCCcc
Confidence 5766 7996 3579999999999 888753
No 67
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=95.34 E-value=0.0016 Score=43.23 Aligned_cols=33 Identities=21% Similarity=0.522 Sum_probs=19.2
Q ss_pred ceeeeCCCCeeCCCCCCCCCCCCCCC-CCEEcC-------CCeEEcCCCCee
Q psy8491 27 QAVICRFDLKFVNASYCAPVCSSPCI-NGACVF-------PEQCHCSPGFQF 70 (273)
Q Consensus 27 ~~C~C~~Gy~~~~~~~C~~~C~~~C~-~g~C~~-------~~~C~C~~Gy~g 70 (273)
..|.|++||. +.+|. +|+|+. .++|+|.+||+|
T Consensus 3 ~~C~C~~g~~-----------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G 43 (52)
T 3ca7_A 3 PTYKCPETFD-----------AWYCLNDAHCFAVKIADLPVYSCECAIGFMG 43 (52)
T ss_dssp CCBCCCHHHH-----------HHTSCTTCEEEEEEETTEEEEEEECCTTEES
T ss_pred eeeECCCCCc-----------CCcCCCCCEEecCccCCCCCEEEECCCCCcC
Confidence 3566666665 12355 456652 246777777777
No 68
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.19 E-value=0.0068 Score=55.81 Aligned_cols=68 Identities=16% Similarity=0.458 Sum_probs=17.9
Q ss_pred cccccc--ccccccccCCCCceeeeCCCCeeCC-CCCCCC--CCC--CCCCCCEEcC---CCeEEcCCCCee-CCCCCcc
Q psy8491 9 DEYLLS--VIQSTSMSQDLRQAVICRFDLKFVN-ASYCAP--VCS--SPCINGACVF---PEQCHCSPGFQF-VNETYCE 77 (273)
Q Consensus 9 ~~~~~~--~~~~~~~~~~~~~~C~C~~Gy~~~~-~~~C~~--~C~--~~C~~g~C~~---~~~C~C~~Gy~g-~~~~~C~ 77 (273)
++|... .|.+++.+..+++.|.|++||++.. ...|.. .|. .+|.++ |++ .++|.|.+||+. .+...|+
T Consensus 4 ~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG-CTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp ------------------------------------------------CCTTE-EC-----CCEECCTTEEECTTSSCEE
T ss_pred CcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCc-CCCCCCCCeEEECCCceEcCCCCeEC
Confidence 445433 3777888888999999999998532 455643 342 356543 775 589999999996 3345665
No 69
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=94.99 E-value=0.0084 Score=56.58 Aligned_cols=77 Identities=17% Similarity=0.378 Sum_probs=22.3
Q ss_pred CCCceeeeCCCCeeCCCCCCCCCCC-CCCCCCEE-----cCCCeEE-cCCCCeeCCCCCcccCCCCCCC-ceecCCCcee
Q psy8491 24 DLRQAVICRFDLKFVNASYCAPVCS-SPCINGAC-----VFPEQCH-CSPGFQFVNETYCEPYCENCQH-GTCTAPSVCE 95 (273)
Q Consensus 24 ~~~~~C~C~~Gy~~~~~~~C~~~C~-~~C~~g~C-----~~~~~C~-C~~Gy~g~~~~~C~~~C~~C~~-G~C~~~~~C~ 95 (273)
.+.+.|.|+++|.|...+.|.+.-. .++.+|.+ ..++.|+ |.-++.| ..|.+.=..|.| |+|.....|+
T Consensus 310 ~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g---~~CD~~t~~C~ngg~C~~~~~C~ 386 (426)
T 3zyj_B 310 NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGT---NVCDNELLHCQNGGTCHNNVRCL 386 (426)
T ss_dssp TTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC------------------------------
T ss_pred CCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCc---CccccCcccCCCCCCcCCCCCCc
Confidence 3456788888887766666655432 13333332 1234554 2223334 445432235554 5676544788
Q ss_pred eCCCcccC
Q psy8491 96 CESGFVHN 103 (273)
Q Consensus 96 C~~Gy~g~ 103 (273)
|++||+|.
T Consensus 387 C~~G~~G~ 394 (426)
T 3zyj_B 387 CPAAYTGI 394 (426)
T ss_dssp --------
T ss_pred CCCCCcCC
Confidence 88888884
No 70
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=94.88 E-value=0.014 Score=38.58 Aligned_cols=28 Identities=21% Similarity=0.752 Sum_probs=22.3
Q ss_pred CCCC-Ceec-----CCCeeECCCCceeCCCCccccC
Q psy8491 173 NCTR-GYCL-----EPNECSCPYNFHLEGGMCMIAE 202 (273)
Q Consensus 173 ~C~n-G~C~-----~~~~C~C~~Gy~G~~~~C~~~~ 202 (273)
+|+| |+|+ +.+.|.|++||+| .+|+...
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G--~~Ce~~~ 46 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSG--DRCQTRD 46 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCS--SSSCCCS
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcC--CcCCccC
Confidence 5766 7997 3478999999999 8898753
No 71
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=94.27 E-value=0.022 Score=38.97 Aligned_cols=27 Identities=26% Similarity=0.596 Sum_probs=22.1
Q ss_pred CCCC-CeecC--------CCeeECCCCceeCCCCcccc
Q psy8491 173 NCTR-GYCLE--------PNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~n-G~C~~--------~~~C~C~~Gy~G~~~~C~~~ 201 (273)
+|+| |+|+. .+.|.|++||+| .+|+..
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G--~~Ce~~ 48 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTG--ARCTEN 48 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTEES--TTSCEE
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCCcC--CccCcC
Confidence 6777 79963 478999999999 899864
No 72
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.13 E-value=0.038 Score=51.08 Aligned_cols=56 Identities=36% Similarity=0.860 Sum_probs=39.0
Q ss_pred CCEEcC---CCeEEcCCCCeeCCCCCcc--cCC---CCCCCceecCC---CceeeCCCcccCCCCCcc
Q psy8491 53 NGACVF---PEQCHCSPGFQFVNETYCE--PYC---ENCQHGTCTAP---SVCECESGFVHNNETNAC 109 (273)
Q Consensus 53 ~g~C~~---~~~C~C~~Gy~g~~~~~C~--~~C---~~C~~G~C~~~---~~C~C~~Gy~g~~~~~~C 109 (273)
.+.|.+ .|.|.|++||++.+...|+ ++| ..|.+ .|++. +.|.|.+||.++.....|
T Consensus 11 ~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~-~C~n~~g~~~C~C~~g~~~~~~~~~C 77 (400)
T 3p5b_L 11 SHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ-LCVNLEGGYKCQCEEGFQLDPHTKAC 77 (400)
T ss_dssp SSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS-CCBCCSSSCBCCCCTTCCCCTTTSSC
T ss_pred CCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC-ccCCCccceeeeccccccccccccce
Confidence 346765 5799999999963346677 456 34544 67653 599999999986544455
No 73
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=94.07 E-value=0.016 Score=38.17 Aligned_cols=36 Identities=19% Similarity=0.535 Sum_probs=27.2
Q ss_pred cCCCCeeeCCCCCCCCCCCCCCCC-CeecC-------CCeeECCCCceeCCCCcccc
Q psy8491 153 QCDVGYTLNPRTLYCEPECFNCTR-GYCLE-------PNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 153 ~C~~Gy~g~~c~~~C~~~C~~C~n-G~C~~-------~~~C~C~~Gy~G~~~~C~~~ 201 (273)
.|++||+.. +|+| |+|+. .+.|.|++||+| .+||..
T Consensus 6 ~C~~g~~~~-----------pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G--~~Ce~~ 49 (52)
T 3ca7_A 6 KCPETFDAW-----------YCLNDAHCFAVKIADLPVYSCECAIGFMG--QRCEYK 49 (52)
T ss_dssp CCCHHHHHH-----------TSCTTCEEEEEEETTEEEEEEECCTTEES--TTSCEE
T ss_pred ECCCCCcCC-----------cCCCCCEEecCccCCCCCEEEECCCCCcC--CCCccc
Confidence 677888722 4656 79973 368999999999 888754
No 74
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.69 E-value=0.032 Score=56.66 Aligned_cols=61 Identities=21% Similarity=0.570 Sum_probs=32.0
Q ss_pred cccccccCCCCceeeeCCCCeeCCCCCCCC--CCCC--CCCCCEEcC---CCeEEcCCCCee-CCCCCcc
Q psy8491 16 IQSTSMSQDLRQAVICRFDLKFVNASYCAP--VCSS--PCINGACVF---PEQCHCSPGFQF-VNETYCE 77 (273)
Q Consensus 16 ~~~~~~~~~~~~~C~C~~Gy~~~~~~~C~~--~C~~--~C~~g~C~~---~~~C~C~~Gy~g-~~~~~C~ 77 (273)
|.++++++.++|.|.|++||++.+...|.. .|.. .| ...|++ .|+|.|.+||++ .+...|.
T Consensus 322 C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C-~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~ 390 (791)
T 3m0c_C 322 CSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTC-SQLCVNLEGGYKCQCEEGFQLDPHTKACK 390 (791)
T ss_dssp CSSEEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSC-TTTCCBCSSCBCCCCCSSEECCSSCCCCE
T ss_pred ccccccCCCCCcccCCCCCCccCCCCccccCcccCCCCCC-CCeeecCCCCceeecCCCCEeCCCCceee
Confidence 334566666777777777776544444432 2221 12 224443 466777777766 3334454
No 75
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=93.64 E-value=0.019 Score=38.13 Aligned_cols=27 Identities=26% Similarity=0.709 Sum_probs=21.9
Q ss_pred CCCC-Ceec--C---CCeeECCCCceeCCCCcccc
Q psy8491 173 NCTR-GYCL--E---PNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~n-G~C~--~---~~~C~C~~Gy~G~~~~C~~~ 201 (273)
+|+| |+|. . .+.|.|++||+| .+|+..
T Consensus 13 pC~nGG~C~~~~~~~~~~C~C~~GytG--~~Ce~~ 45 (53)
T 1nql_B 13 YCLHDGVCMYIEALDKYACNCVVGYIG--ERCQYR 45 (53)
T ss_dssp EECTTCEEEEETTTTEEEEEECTTEES--TTSCEE
T ss_pred CCCCCeEEeeecCCCCEEEecCCCCcC--CCCCcC
Confidence 6767 7996 2 379999999999 899865
No 76
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=93.61 E-value=0.029 Score=38.03 Aligned_cols=31 Identities=23% Similarity=0.502 Sum_probs=23.6
Q ss_pred CCCC-Ceec-----C--CCeeECCCCceeCCCCccccCCcc
Q psy8491 173 NCTR-GYCL-----E--PNECSCPYNFHLEGGMCMIAEGFH 205 (273)
Q Consensus 173 ~C~n-G~C~-----~--~~~C~C~~Gy~G~~~~C~~~~~~~ 205 (273)
+|+| |+|. . .+.|.|++||+| .+||......
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G--~~Ce~~~~~~ 53 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMG--QRCEYKEIDN 53 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEES--SSSCEECCCC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCcc--CCCcccCCCC
Confidence 4667 6996 2 258999999999 9998765443
No 77
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=93.47 E-value=0.037 Score=35.61 Aligned_cols=22 Identities=27% Similarity=1.005 Sum_probs=14.2
Q ss_pred CCCCCCEEcC-----CCeEEcCCCCee
Q psy8491 49 SPCINGACVF-----PEQCHCSPGFQF 70 (273)
Q Consensus 49 ~~C~~g~C~~-----~~~C~C~~Gy~g 70 (273)
.+|.||+|.. .++|.|.+||+|
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~GytG 38 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYTG 38 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCSS
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCcc
Confidence 4566667752 356777777777
No 78
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.07 E-value=0.06 Score=53.63 Aligned_cols=52 Identities=23% Similarity=0.593 Sum_probs=24.9
Q ss_pred cccccCCCCceeeeCCCCeeCCCCCCCC--CCC--CCCCCCEEcC---CCeEEcCCCCee
Q psy8491 18 STSMSQDLRQAVICRFDLKFVNASYCAP--VCS--SPCINGACVF---PEQCHCSPGFQF 70 (273)
Q Consensus 18 ~~~~~~~~~~~C~C~~Gy~~~~~~~C~~--~C~--~~C~~g~C~~---~~~C~C~~Gy~g 70 (273)
++++++.++|.|.|++||++.+...|.. .|. .+|. ..|++ .|+|.|.+||++
T Consensus 306 ~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~-~~C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 306 HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp TTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT-TTCCBCSSCBCCCCCSSCBC
T ss_pred CCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccc-cccccCCCCeeeeeeccccc
Confidence 4555555666666666666533334421 121 1221 23333 356666666665
No 79
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.06 E-value=0.052 Score=35.74 Aligned_cols=27 Identities=26% Similarity=0.600 Sum_probs=22.0
Q ss_pred CCCCCeec-----CCCeeECCCCceeCCCCcccc
Q psy8491 173 NCTRGYCL-----EPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~nG~C~-----~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
.|.||+|. ....|.|++||+| .+|+..
T Consensus 15 yC~nG~C~~~~~~~~~~C~C~~gy~G--~RCe~~ 46 (50)
T 3e50_C 15 FCFHGTCRFLVQEDKPACVCHSGYVG--ARCEHA 46 (50)
T ss_pred cccCCEEeeccCCCCeEEECCCCCcc--cCCCce
Confidence 57789995 2368999999999 999864
No 80
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=92.73 E-value=0.064 Score=35.97 Aligned_cols=26 Identities=27% Similarity=0.749 Sum_probs=18.9
Q ss_pred CCCC-CCEEc--------CCCeEEcCCCCeeCCCCCcc
Q psy8491 49 SPCI-NGACV--------FPEQCHCSPGFQFVNETYCE 77 (273)
Q Consensus 49 ~~C~-~g~C~--------~~~~C~C~~Gy~g~~~~~C~ 77 (273)
.+|. +|+|. +.|+|.|++||+| ..|+
T Consensus 14 ~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G---~~CE 48 (55)
T 3u7u_G 14 TFCVNGGECFMVKDLSNPSRYLCKCPNEFTG---DRCQ 48 (55)
T ss_dssp TTSCTTCEEEEECCC--CCCEEEEECTTEES---TTSC
T ss_pred CCCCCCCCcCCCCccCCCCCEeEeCCCCCcC---CCcC
Confidence 4677 67883 2578888888888 6665
No 81
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=92.57 E-value=0.055 Score=33.04 Aligned_cols=22 Identities=36% Similarity=0.976 Sum_probs=15.4
Q ss_pred CCCC-CCEEcC---CCeEEcCCCCee
Q psy8491 49 SPCI-NGACVF---PEQCHCSPGFQF 70 (273)
Q Consensus 49 ~~C~-~g~C~~---~~~C~C~~Gy~g 70 (273)
.+|. +|+|++ .++|.|++||+|
T Consensus 9 ~pC~ngg~C~~~~~~~~C~C~~G~~G 34 (39)
T 1edm_B 9 NPCLNGGSCKDDINSYECWCPFGFEG 34 (39)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTCCS
T ss_pred CCCCCCCEeEcCCCceEeECCCCCcC
Confidence 3566 567764 467888888887
No 82
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=92.52 E-value=0.099 Score=33.12 Aligned_cols=21 Identities=24% Similarity=0.638 Sum_probs=13.1
Q ss_pred CCC-CCEEc-----CCCeEEcCCCCee
Q psy8491 50 PCI-NGACV-----FPEQCHCSPGFQF 70 (273)
Q Consensus 50 ~C~-~g~C~-----~~~~C~C~~Gy~g 70 (273)
+|. +|+|+ ..++|.|.+||+|
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G 36 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSG 36 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEET
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcC
Confidence 465 46675 2456777777777
No 83
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=92.00 E-value=0.065 Score=34.83 Aligned_cols=24 Identities=13% Similarity=-0.043 Sum_probs=18.2
Q ss_pred ccccccccCCCCceeeeCCCCeeC
Q psy8491 15 VIQSTSMSQDLRQAVICRFDLKFV 38 (273)
Q Consensus 15 ~~~~~~~~~~~~~~C~C~~Gy~~~ 38 (273)
.|.+.++++.++|.|.|++||.+.
T Consensus 21 ~C~~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 21 QCQHLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp TTSSEEEEETTEEEEECSTTCEEC
T ss_pred CCCCEeECCCCCeEEECCCCCeEC
Confidence 366677788888888888888764
No 84
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=91.66 E-value=0.094 Score=34.47 Aligned_cols=33 Identities=27% Similarity=0.592 Sum_probs=23.9
Q ss_pred CCCCCCC-CCCCCeec--C---CCeeECCCCceeCCCCccc
Q psy8491 166 YCEPECF-NCTRGYCL--E---PNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 166 ~C~~~C~-~C~nG~C~--~---~~~C~C~~Gy~G~~~~C~~ 200 (273)
.|.++.. .|.||+|. . ...|.|++||+| .+|+.
T Consensus 11 ~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~G--~RCe~ 49 (50)
T 2rnl_A 11 PCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYFG--ERCGE 49 (50)
T ss_dssp TTTTTGGGTCSSSEEEEETTTTEEEEECCSSCCS--SSCCC
T ss_pred ccCchhhCcCCCCEEEEecCCCCeeEECCCCccc--ccccc
Confidence 4443333 67799996 1 257999999999 88875
No 85
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=91.15 E-value=0.11 Score=34.47 Aligned_cols=32 Identities=13% Similarity=0.216 Sum_probs=23.6
Q ss_pred ccccccccCCCCceeeeCCCCeeC-CCCCCCCC
Q psy8491 15 VIQSTSMSQDLRQAVICRFDLKFV-NASYCAPV 46 (273)
Q Consensus 15 ~~~~~~~~~~~~~~C~C~~Gy~~~-~~~~C~~~ 46 (273)
.|.+.++++.++|.|.|++||++. +...|.++
T Consensus 10 ~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~di 42 (55)
T 2jkh_L 10 DCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 42 (55)
T ss_dssp GCSSEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CcCcEeEcCCCCeEEeCCCCCEECCCCCeeccC
Confidence 366788888899999999999864 34556543
No 86
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=91.13 E-value=0.081 Score=49.88 Aligned_cols=17 Identities=24% Similarity=0.610 Sum_probs=12.5
Q ss_pred CEEcC---CCeEEcCCCCee
Q psy8491 54 GACVF---PEQCHCSPGFQF 70 (273)
Q Consensus 54 g~C~~---~~~C~C~~Gy~g 70 (273)
..|.. .++|.|..||+|
T Consensus 304 s~C~~~~g~~~C~C~~~ttG 323 (426)
T 3zyj_B 304 TVCVYDNSKLTCECEHNTTG 323 (426)
T ss_dssp SCEEEETTEEEECCCTTEES
T ss_pred hhcCCCCCCceeeCCCCCcC
Confidence 35653 258999999999
No 87
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=91.12 E-value=0.093 Score=35.91 Aligned_cols=26 Identities=23% Similarity=0.390 Sum_probs=20.5
Q ss_pred CCCC---CeecC---CCeeECCCCce-eCCCCccc
Q psy8491 173 NCTR---GYCLE---PNECSCPYNFH-LEGGMCMI 200 (273)
Q Consensus 173 ~C~n---G~C~~---~~~C~C~~Gy~-G~~~~C~~ 200 (273)
+|+| |+|+. .|.|.|++||+ | ..|+.
T Consensus 18 PC~nga~gtC~~~~g~y~C~C~~Gy~~G--~~C~~ 50 (61)
T 2k2s_B 18 PCGPEAAGTCKETNSGYICRCNQGYRIS--LDGTG 50 (61)
T ss_dssp SSCSSSCCEEEECSSEEEEECCTTEEEE--ECSSS
T ss_pred CCcCCCccccccCCCceEeECCCCCccC--CCCCC
Confidence 7876 48973 47999999999 9 77764
No 88
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.80 E-value=0.073 Score=34.95 Aligned_cols=27 Identities=22% Similarity=0.629 Sum_probs=21.5
Q ss_pred CCCCCeec-----CCCeeECCCCceeCCCCcccc
Q psy8491 173 NCTRGYCL-----EPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~nG~C~-----~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
.|.||+|. ....|.|++||+| .+||..
T Consensus 15 yC~nG~C~~~~~~~~~~C~C~~gy~G--~RCe~~ 46 (50)
T 1iox_A 15 YCIKGRCRFVVAEQTPSCVCDEGYIG--ARCERV 46 (50)
T ss_dssp SCTTCCEEEETTTTEEEECCCTTEET--TTTCEE
T ss_pred cccCCEEEeEcCCCCeEEECCCCccc--CCCCee
Confidence 57789894 2357999999999 999864
No 89
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=90.12 E-value=0.27 Score=32.19 Aligned_cols=25 Identities=28% Similarity=0.851 Sum_probs=16.0
Q ss_pred CCC-CCEEc--C---CCeEEcCCCCeeCCCCCcc
Q psy8491 50 PCI-NGACV--F---PEQCHCSPGFQFVNETYCE 77 (273)
Q Consensus 50 ~C~-~g~C~--~---~~~C~C~~Gy~g~~~~~C~ 77 (273)
+|. +|+|+ + .++|.|++||+| ..|+
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G---~~Ce 43 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSG---DRCQ 43 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCS---SSSC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcC---CcCC
Confidence 566 46776 2 457777777777 4554
No 90
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=89.89 E-value=0.13 Score=34.07 Aligned_cols=27 Identities=26% Similarity=0.790 Sum_probs=17.7
Q ss_pred CCCCC-CCEEc--C---CCeEEcCCCCeeCCCCCcc
Q psy8491 48 SSPCI-NGACV--F---PEQCHCSPGFQFVNETYCE 77 (273)
Q Consensus 48 ~~~C~-~g~C~--~---~~~C~C~~Gy~g~~~~~C~ 77 (273)
+.+|. +|+|+ . .++|.|.+||+| ..|+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG---~~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIG---ERCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEES---TTSC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcC---CCCC
Confidence 44566 46775 2 357888888888 5565
No 91
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=89.86 E-value=0.071 Score=53.27 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=23.6
Q ss_pred eeCCCCeeCCCCCCCCCCCCCCC-CCEEcCCCeEEcCCCCee
Q psy8491 30 ICRFDLKFVNASYCAPVCSSPCI-NGACVFPEQCHCSPGFQF 70 (273)
Q Consensus 30 ~C~~Gy~~~~~~~C~~~C~~~C~-~g~C~~~~~C~C~~Gy~g 70 (273)
.|.+||.|.+... .+.|...|. ||+|++ ++|.|.+||+|
T Consensus 521 ~C~~gw~g~dc~i-~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G 560 (725)
T 2e26_A 521 DKQQTWAIDNVYI-GDGCLDMCSGHGRCVQ-GSCVCDEQWGG 560 (725)
T ss_dssp CTTCCEEEEEEEE-ESCSSGGGGGSEEEET-TEEEECTTEES
T ss_pred ccCCCcccccccc-cCCCCcccCCCcEECC-CCEeeCCCccC
Confidence 5666776654321 145555565 777776 67777777777
No 92
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=89.34 E-value=0.12 Score=33.77 Aligned_cols=36 Identities=11% Similarity=0.249 Sum_probs=25.2
Q ss_pred cccccccCCCCceeeeCCCCeeC-CCCCCCCCCCCCC
Q psy8491 16 IQSTSMSQDLRQAVICRFDLKFV-NASYCAPVCSSPC 51 (273)
Q Consensus 16 ~~~~~~~~~~~~~C~C~~Gy~~~-~~~~C~~~C~~~C 51 (273)
|.+.++++.++|.|.|++||++. +...|.++-+-+|
T Consensus 8 C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~pC 44 (51)
T 1kig_L 8 CDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFPC 44 (51)
T ss_dssp SSSCCCEETTEECCCCCTTEEECTTSSCEEECSSSCT
T ss_pred cCCEeEcCCCCeEEeCCCCcEECCCCCccccCCcccC
Confidence 56677888889999999999864 4556655433334
No 93
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=88.95 E-value=0.15 Score=46.61 Aligned_cols=55 Identities=29% Similarity=0.866 Sum_probs=17.8
Q ss_pred EEcC---CCeEEcCCCCee-CCCCCcc--cCC---CCCCCceecCC---CceeeCCCcccCCCCCccc
Q psy8491 55 ACVF---PEQCHCSPGFQF-VNETYCE--PYC---ENCQHGTCTAP---SVCECESGFVHNNETNACE 110 (273)
Q Consensus 55 ~C~~---~~~C~C~~Gy~g-~~~~~C~--~~C---~~C~~G~C~~~---~~C~C~~Gy~g~~~~~~C~ 110 (273)
.|.+ .++|.|.+||+. .+...|+ ++| ..|.++ |++. +.|.|.+||........|.
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~-C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG-CTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp ------------------------------------CCTTE-EC-----CCEECCTTEEECTTSSCEE
T ss_pred CCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCc-CCCCCCCCeEEECCCceEcCCCCeEC
Confidence 5643 479999999994 2236676 356 356555 7653 5999999998644334553
No 94
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=88.91 E-value=0.19 Score=34.13 Aligned_cols=26 Identities=35% Similarity=0.990 Sum_probs=18.3
Q ss_pred CCCC-CCEEcC--------CCeEEcCCCCeeCCCCCcc
Q psy8491 49 SPCI-NGACVF--------PEQCHCSPGFQFVNETYCE 77 (273)
Q Consensus 49 ~~C~-~g~C~~--------~~~C~C~~Gy~g~~~~~C~ 77 (273)
.+|. +|+|+. .++|.|.+||+| ..|+
T Consensus 12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G---~~Ce 46 (63)
T 1hae_A 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTG---ARCT 46 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCEEEECCTTEES---TTSC
T ss_pred CcCCCCcEEecCCccCCCCCEEEECCCCCcC---CccC
Confidence 3566 478863 467888888888 5665
No 95
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=88.67 E-value=0.29 Score=35.26 Aligned_cols=26 Identities=27% Similarity=0.629 Sum_probs=21.5
Q ss_pred CCCCCeec-----CCCeeECCCCceeCCCCccc
Q psy8491 173 NCTRGYCL-----EPNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 173 ~C~nG~C~-----~~~~C~C~~Gy~G~~~~C~~ 200 (273)
.|+||+|. ..+.|.|++||+| .+|+.
T Consensus 47 yClnG~C~~i~~~~~~~C~C~~GYtG--~RCE~ 77 (79)
T 1xdt_R 47 FCIHGECKYVKELRAPSCICHPGYHG--ERCHG 77 (79)
T ss_dssp CCSSEEECCBGGGTBCCEEECTTEES--TTCCE
T ss_pred cCCCCEeeeecCCCCeEEEcCCCccc--ccccc
Confidence 68899994 2368999999999 88875
No 96
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=88.47 E-value=0.27 Score=34.34 Aligned_cols=40 Identities=8% Similarity=0.153 Sum_probs=27.2
Q ss_pred ccccccccc--cccccccCCC-CceeeeCCCCeeC-CCCCCCCC
Q psy8491 7 TMDEYLLSV--IQSTSMSQDL-RQAVICRFDLKFV-NASYCAPV 46 (273)
Q Consensus 7 ~~~~~~~~~--~~~~~~~~~~-~~~C~C~~Gy~~~-~~~~C~~~ 46 (273)
..++|...+ |.+.++++.+ ++.|.|++||.+. +...|.++
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~ 47 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 47 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCc
Confidence 345555433 7788888887 7889999998864 45566544
No 97
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=88.01 E-value=0.32 Score=32.78 Aligned_cols=37 Identities=16% Similarity=0.385 Sum_probs=26.8
Q ss_pred ccccccccCC-CCceeeeCCCCeeC-CCCCCCCCCCCCC
Q psy8491 15 VIQSTSMSQD-LRQAVICRFDLKFV-NASYCAPVCSSPC 51 (273)
Q Consensus 15 ~~~~~~~~~~-~~~~C~C~~Gy~~~-~~~~C~~~C~~~C 51 (273)
.|.+.++++. +++.|.|++||.+. +...|.++-+.+|
T Consensus 8 gC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~pC 46 (59)
T 2wph_E 8 RCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFPC 46 (59)
T ss_dssp GCSSEEEECSTTCEEEECCTTEEECTTSSCEEESSSSCT
T ss_pred CcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCCCCC
Confidence 3677888888 59999999999875 4566765433444
No 98
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=85.88 E-value=0.26 Score=33.64 Aligned_cols=22 Identities=32% Similarity=0.851 Sum_probs=16.8
Q ss_pred CCCCC---CEEcC---CCeEEcCCCCe-e
Q psy8491 49 SPCIN---GACVF---PEQCHCSPGFQ-F 70 (273)
Q Consensus 49 ~~C~~---g~C~~---~~~C~C~~Gy~-g 70 (273)
.+|.| |+|++ .|+|.|++||+ |
T Consensus 17 nPC~nga~gtC~~~~g~y~C~C~~Gy~~G 45 (61)
T 2k2s_B 17 NPCGPEAAGTCKETNSGYICRCNQGYRIS 45 (61)
T ss_dssp CSSCSSSCCEEEECSSEEEEECCTTEEEE
T ss_pred CCCcCCCccccccCCCceEeECCCCCccC
Confidence 45774 58875 47899999999 8
No 99
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=85.43 E-value=0.34 Score=31.83 Aligned_cols=31 Identities=10% Similarity=0.319 Sum_probs=22.7
Q ss_pred cccccccCCC-CceeeeCCCCeeC-CCCCCCCC
Q psy8491 16 IQSTSMSQDL-RQAVICRFDLKFV-NASYCAPV 46 (273)
Q Consensus 16 ~~~~~~~~~~-~~~C~C~~Gy~~~-~~~~C~~~ 46 (273)
|.+.++++.+ ++.|.|++||++. +...|.++
T Consensus 9 C~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~ 41 (53)
T 2bz6_L 9 CEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPT 41 (53)
T ss_dssp CSSEEEEETTTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCCEeEcCCCCCEEeeCCCCCEECCCCCcccCC
Confidence 6677788777 7899999999864 35566544
No 100
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=83.19 E-value=0.29 Score=48.91 Aligned_cols=44 Identities=16% Similarity=0.365 Sum_probs=33.6
Q ss_pred cCCCCeeeCCCC--CCCCCCCCCCCCCeecCCCeeECCCCceeCCCCcccc
Q psy8491 153 QCDVGYTLNPRT--LYCEPECFNCTRGYCLEPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 153 ~C~~Gy~g~~c~--~~C~~~C~~C~nG~C~~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
.|.+||.|+.|. ..|...|.. +|.|+. ++|+|.+||.| ..|...
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~g--hG~C~~-G~C~Cd~G~~G--~~C~~~ 566 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSG--HGRCVQ-GSCVCDEQWGG--LYCDEP 566 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGG--SEEEET-TEEEECTTEES--TTSCEE
T ss_pred ccCCCcccccccccCCCCcccCC--CcEECC-CCEeeCCCccC--CCcCcc
Confidence 599999998775 344443333 799986 79999999999 788654
No 101
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=83.10 E-value=1.3 Score=33.21 Aligned_cols=50 Identities=28% Similarity=0.727 Sum_probs=32.2
Q ss_pred CC-CCEEcC----CCeEEcCCCCeeCCCCCccc----CC----CCCC-CceecC--C------CceeeCCCcc
Q psy8491 51 CI-NGACVF----PEQCHCSPGFQFVNETYCEP----YC----ENCQ-HGTCTA--P------SVCECESGFV 101 (273)
Q Consensus 51 C~-~g~C~~----~~~C~C~~Gy~g~~~~~C~~----~C----~~C~-~G~C~~--~------~~C~C~~Gy~ 101 (273)
|. |+.|.. ..+|+|.+||.++ ...|.+ .| ..|. |+.|.. + -.|+|.+||.
T Consensus 12 C~~NA~C~r~~~g~e~C~C~~gy~gd-g~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 12 CPQNSGCFRHLDEREECKCLLNYKQE-GDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCTTEEEECCTTSCCEEEECTTEEEE-TTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CCCCCCeEEcCCCCEEEEecCCeecC-CCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 45 888865 3579999999983 366763 24 2343 566632 2 2688888864
No 102
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=82.39 E-value=0.76 Score=30.04 Aligned_cols=26 Identities=35% Similarity=0.930 Sum_probs=19.1
Q ss_pred CCCCCCEEcC-----CCeEEcCCCCeeCCCCCcc
Q psy8491 49 SPCINGACVF-----PEQCHCSPGFQFVNETYCE 77 (273)
Q Consensus 49 ~~C~~g~C~~-----~~~C~C~~Gy~g~~~~~C~ 77 (273)
..|.||+|.. ...|.|.+||+| ..|+
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G---~RCe 44 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGYVG---ARCE 44 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCCcc---cCCC
Confidence 4567788863 468999999999 5565
No 103
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=80.68 E-value=0.95 Score=45.79 Aligned_cols=54 Identities=37% Similarity=0.886 Sum_probs=33.7
Q ss_pred EEcC---CCeEEcCCCCeeCCCCCcc--cCC---CCCCCceecC---CCceeeCCCcccCCCCCcc
Q psy8491 55 ACVF---PEQCHCSPGFQFVNETYCE--PYC---ENCQHGTCTA---PSVCECESGFVHNNETNAC 109 (273)
Q Consensus 55 ~C~~---~~~C~C~~Gy~g~~~~~C~--~~C---~~C~~G~C~~---~~~C~C~~Gy~g~~~~~~C 109 (273)
.|++ .|+|.|.+||++.....|+ ++| ..|. ..|++ .++|.|.+||++......|
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~-~~C~n~~gsy~C~C~~Gy~l~~~~~~C 389 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS-QLCVNLEGGYKCQCEEGFQLDPHTKAC 389 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCT-TTCCBCSSCBCCCCCSSEECCSSCCCC
T ss_pred cccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCC-CeeecCCCCceeecCCCCEeCCCCcee
Confidence 6664 5789999999863335565 344 1232 35654 3589999999875444455
No 104
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=79.82 E-value=1.3 Score=31.84 Aligned_cols=27 Identities=33% Similarity=0.998 Sum_probs=17.2
Q ss_pred CCCCCCCEEcC-----CCeEEcCCCCeeCCCCCcc
Q psy8491 48 SSPCINGACVF-----PEQCHCSPGFQFVNETYCE 77 (273)
Q Consensus 48 ~~~C~~g~C~~-----~~~C~C~~Gy~g~~~~~C~ 77 (273)
...|.||.|.. .+.|.|.+||+| ..|+
T Consensus 45 ~~yClnG~C~~i~~~~~~~C~C~~GYtG---~RCE 76 (79)
T 1xdt_R 45 KDFCIHGECKYVKELRAPSCICHPGYHG---ERCH 76 (79)
T ss_dssp TTCCSSEEECCBGGGTBCCEEECTTEES---TTCC
T ss_pred cCcCCCCEeeeecCCCCeEEEcCCCccc---cccc
Confidence 34566777741 356788888877 5554
No 105
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=79.80 E-value=1.4 Score=33.24 Aligned_cols=50 Identities=32% Similarity=0.670 Sum_probs=32.7
Q ss_pred CC-CCEEcC----CCeEEcCCCCeeCCCCCccc---CC----CCCC-CceecCC--C--ceeeCCCcc
Q psy8491 51 CI-NGACVF----PEQCHCSPGFQFVNETYCEP---YC----ENCQ-HGTCTAP--S--VCECESGFV 101 (273)
Q Consensus 51 C~-~g~C~~----~~~C~C~~Gy~g~~~~~C~~---~C----~~C~-~G~C~~~--~--~C~C~~Gy~ 101 (273)
|. |+.|.. .-+|.|..||.++ ...|.+ .| ..|. ++.|... . .|.|.++|.
T Consensus 18 Cp~NA~C~r~~~G~e~CrCl~gY~~d-g~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 18 VPENAACYRYLDGTEEWRCLLGFKEV-GGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEEC-SSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CCCCCCeEECCCCCEeEEEECCeecc-CCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 55 888875 3479999999993 467773 24 2343 5666432 2 688888864
No 106
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=79.66 E-value=0.76 Score=35.49 Aligned_cols=28 Identities=32% Similarity=0.790 Sum_probs=21.4
Q ss_pred CCCC-CeecC-----CC-eeECCCCceeCCCCccccC
Q psy8491 173 NCTR-GYCLE-----PN-ECSCPYNFHLEGGMCMIAE 202 (273)
Q Consensus 173 ~C~n-G~C~~-----~~-~C~C~~Gy~G~~~~C~~~~ 202 (273)
+|+| |+|+. .+ .|.|++||+| ..|++..
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G--~~Ce~~~ 36 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGG--QHCEIDK 36 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEES--TTSCEES
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCC--ccccccC
Confidence 4667 68953 24 8999999999 8888753
No 107
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=79.37 E-value=1.2 Score=39.60 Aligned_cols=47 Identities=30% Similarity=0.711 Sum_probs=30.1
Q ss_pred CC-CCEEcCCCeEEcCCCCeeCCCCCcc----c--------CC------CCCC-CceecCCCceeeCCCccc
Q psy8491 51 CI-NGACVFPEQCHCSPGFQFVNETYCE----P--------YC------ENCQ-HGTCTAPSVCECESGFVH 102 (273)
Q Consensus 51 C~-~g~C~~~~~C~C~~Gy~g~~~~~C~----~--------~C------~~C~-~G~C~~~~~C~C~~Gy~g 102 (273)
|. +|.|.- +.|.|.+||+| ..|+ . .| ..|. ||.|+- ++|+|..+|.+
T Consensus 198 C~g~G~~~C-G~C~C~~g~~G---~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~~~ 264 (280)
T 2p26_A 198 CHGKGFLEC-GICRCDTGYIG---KNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVP 264 (280)
T ss_dssp GGGSEEEET-TEEEECTTEES---TTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCSST
T ss_pred cCCCCeECC-CceeCCCCCcC---CcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCCCC
Confidence 55 677664 78999999999 3333 0 23 1244 567754 67888887755
No 108
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=79.29 E-value=1.1 Score=41.38 Aligned_cols=25 Identities=16% Similarity=0.289 Sum_probs=17.4
Q ss_pred cCCCCceeeeCCCCeeCCCCCCCCC
Q psy8491 22 SQDLRQAVICRFDLKFVNASYCAPV 46 (273)
Q Consensus 22 ~~~~~~~C~C~~Gy~~~~~~~C~~~ 46 (273)
+....+.|.|.++|.|...+.|.+.
T Consensus 267 ~~~~~~~C~C~~nt~G~~Ce~C~~g 291 (375)
T 4aqt_A 267 NEFDKLMCNCKHNTYGVDCEKCLPF 291 (375)
T ss_dssp CTTSCEEECCCTTEESTTSCEECTT
T ss_pred CCCCCeeeeCcCCCcCCCcccCCCC
Confidence 3445667889999988776666554
No 109
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=78.42 E-value=0.9 Score=30.43 Aligned_cols=25 Identities=32% Similarity=0.780 Sum_probs=17.3
Q ss_pred CCC-CCEEc-----C--CCeEEcCCCCeeCCCCCcc
Q psy8491 50 PCI-NGACV-----F--PEQCHCSPGFQFVNETYCE 77 (273)
Q Consensus 50 ~C~-~g~C~-----~--~~~C~C~~Gy~g~~~~~C~ 77 (273)
+|. +|+|+ . .+.|.|.+||+| ..|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G---~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMG---QRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEES---SSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCcc---CCCc
Confidence 466 46886 2 347888888888 5665
No 110
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=77.73 E-value=0.92 Score=44.44 Aligned_cols=28 Identities=29% Similarity=0.775 Sum_probs=23.5
Q ss_pred CCCC-Ceec----CCCeeECC-CCceeCCCCccccC
Q psy8491 173 NCTR-GYCL----EPNECSCP-YNFHLEGGMCMIAE 202 (273)
Q Consensus 173 ~C~n-G~C~----~~~~C~C~-~Gy~G~~~~C~~~~ 202 (273)
+|+| |+|. +.|.|.|+ +||+| ..|+...
T Consensus 8 PC~ngG~C~~~~~~~y~C~C~~~G~~G--~~Ce~~~ 41 (587)
T 3nt1_A 8 PCQNRGECMSTGFDQYKCDCTRTGFYG--ENCTTPE 41 (587)
T ss_dssp CCCTTCEEEEEETTEEEEECTTSSEET--TTTCEEC
T ss_pred CCCCCCEeeCCCCCCeEEecCCCCccC--CCCCCch
Confidence 7887 7997 24899999 99999 9999853
No 111
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=77.47 E-value=0.68 Score=36.73 Aligned_cols=27 Identities=37% Similarity=0.769 Sum_probs=21.3
Q ss_pred CCCC-CeecC---CCeeECCCCceeCCCCcccc
Q psy8491 173 NCTR-GYCLE---PNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~n-G~C~~---~~~C~C~~Gy~G~~~~C~~~ 201 (273)
+|++ |+|.. .+.|.|++||+| ..|+..
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~G--~~Ce~~ 156 (162)
T 1g1s_A 126 SCSKQGECLETIGNYTCSCYPGFYG--PECEYV 156 (162)
T ss_dssp GGGGSEEEEECSSSEEEEECTTEES--TTSCEE
T ss_pred CCCCCCEEecCCCCceEeCCCCCcC--cccccC
Confidence 5655 78863 479999999999 788765
No 112
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=77.46 E-value=1.1 Score=29.22 Aligned_cols=22 Identities=27% Similarity=0.815 Sum_probs=12.6
Q ss_pred CCCCCCEEcC-----CCeEEcCCCCee
Q psy8491 49 SPCINGACVF-----PEQCHCSPGFQF 70 (273)
Q Consensus 49 ~~C~~g~C~~-----~~~C~C~~Gy~g 70 (273)
.-|.||+|.. ...|.|.+||+|
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G 44 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEYFG 44 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSCCS
T ss_pred CcCCCCEEEEecCCCCeeEECCCCccc
Confidence 3455666651 235666666666
No 113
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=76.30 E-value=0.74 Score=36.48 Aligned_cols=18 Identities=33% Similarity=0.833 Sum_probs=11.0
Q ss_pred ceecC---CCceeeCCCcccC
Q psy8491 86 GTCTA---PSVCECESGFVHN 103 (273)
Q Consensus 86 G~C~~---~~~C~C~~Gy~g~ 103 (273)
|+|++ .++|+|.+||.|+
T Consensus 131 g~C~~~~~~~~c~C~~g~~G~ 151 (162)
T 1g1s_A 131 GECLETIGNYTCSCYPGFYGP 151 (162)
T ss_dssp EEEEECSSSEEEEECTTEEST
T ss_pred CEEecCCCCceEeCCCCCcCc
Confidence 56643 2367777777764
No 114
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=76.01 E-value=1.7 Score=32.48 Aligned_cols=48 Identities=21% Similarity=0.517 Sum_probs=34.7
Q ss_pred cCCCCceeeeCCCCeeCCCCCCCCC----CC---CCCC-CCEEcC--C------CeEEcCCCCee
Q psy8491 22 SQDLRQAVICRFDLKFVNASYCAPV----CS---SPCI-NGACVF--P------EQCHCSPGFQF 70 (273)
Q Consensus 22 ~~~~~~~C~C~~Gy~~~~~~~C~~~----C~---~~C~-~g~C~~--~------~~C~C~~Gy~g 70 (273)
..++...|+|.+||.+. ...|++. |. ..|. ++.|.. + -.|.|.+||..
T Consensus 21 ~~~g~e~C~C~~gy~gd-g~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~ 84 (99)
T 1ob1_C 21 HLDEREECKCLLNYKQE-GDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSY 84 (99)
T ss_dssp CTTSCCEEEECTTEEEE-TTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCC
T ss_pred cCCCCEEEEecCCeecC-CCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcc
Confidence 46789999999999985 4667543 43 2355 777764 2 46999999865
No 115
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=75.59 E-value=0.9 Score=42.03 Aligned_cols=11 Identities=18% Similarity=0.325 Sum_probs=8.3
Q ss_pred CeEEcCCCCee
Q psy8491 60 EQCHCSPGFQF 70 (273)
Q Consensus 60 ~~C~C~~Gy~g 70 (273)
+.|.|.+||+|
T Consensus 272 ~~C~C~~nt~G 282 (375)
T 4aqt_A 272 LMCNCKHNTYG 282 (375)
T ss_dssp EEECCCTTEES
T ss_pred eeeeCcCCCcC
Confidence 45778888888
No 116
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=72.46 E-value=0.92 Score=40.39 Aligned_cols=30 Identities=23% Similarity=0.596 Sum_probs=24.0
Q ss_pred CCC-CCeec---CCCeeECCCCceeCCCCccccC
Q psy8491 173 NCT-RGYCL---EPNECSCPYNFHLEGGMCMIAE 202 (273)
Q Consensus 173 ~C~-nG~C~---~~~~C~C~~Gy~G~~~~C~~~~ 202 (273)
+|. ++.|. +.|.|.|++||.|+|..|....
T Consensus 14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d~d 47 (285)
T 1gl4_A 14 QCSVHAECRDYATGFCCRCVANYTGNGRQCVAEG 47 (285)
T ss_dssp GSCTTEEEEECSSCEEEEECTTEEECSSSEEETT
T ss_pred CCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCCCC
Confidence 453 57886 4689999999999999997653
No 117
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=72.21 E-value=0.97 Score=43.91 Aligned_cols=28 Identities=29% Similarity=0.807 Sum_probs=23.7
Q ss_pred CCCC-CeecC----CCeeECC-CCceeCCCCccccC
Q psy8491 173 NCTR-GYCLE----PNECSCP-YNFHLEGGMCMIAE 202 (273)
Q Consensus 173 ~C~n-G~C~~----~~~C~C~-~Gy~G~~~~C~~~~ 202 (273)
+|+| |+|.. .|.|.|+ +||+| ..||...
T Consensus 9 PC~ngG~C~~~~~~~y~C~C~~~G~~G--~~Ce~~~ 42 (553)
T 1q4g_A 9 PCQHQGICVRFGLDRYQCDCTRTGYSG--PNCTIPE 42 (553)
T ss_dssp CCCTTCEEEEETTTEEEEECTTSSEET--TTTCEEC
T ss_pred CCCCCCCcCCCCCCceEeeCCCCCcCC--CCCCCCc
Confidence 7877 79976 3899999 99999 9998754
No 118
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=71.74 E-value=4.9 Score=30.31 Aligned_cols=47 Identities=23% Similarity=0.509 Sum_probs=33.7
Q ss_pred cCCCCceeeeCCCCeeCCCCCCCCCCCCC-------CC-CCEEcCCC----eEEcCCCCee
Q psy8491 22 SQDLRQAVICRFDLKFVNASYCAPVCSSP-------CI-NGACVFPE----QCHCSPGFQF 70 (273)
Q Consensus 22 ~~~~~~~C~C~~Gy~~~~~~~C~~~C~~~-------C~-~g~C~~~~----~C~C~~Gy~g 70 (273)
..++...|+|.+||.+. +..|++. .+. |. ++.|...+ .|.|.+||.-
T Consensus 27 ~~~G~e~CrCl~gY~~d-g~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~ 85 (105)
T 1n1i_A 27 YLDGTEEWRCLLGFKEV-GGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSE 85 (105)
T ss_dssp CTTSCEEEEECTTEEEC-SSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCC
T ss_pred CCCCCEeEEEECCeecc-CCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCc
Confidence 46688899999999984 5677655 333 44 66776432 6999999765
No 119
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=70.20 E-value=3.1 Score=36.87 Aligned_cols=43 Identities=26% Similarity=0.423 Sum_probs=30.2
Q ss_pred CceeeeCCCCeeCCCCCCC--C--------CCC-----CCCC-CCEEcCCCeEEcCCCCee
Q psy8491 26 RQAVICRFDLKFVNASYCA--P--------VCS-----SPCI-NGACVFPEQCHCSPGFQF 70 (273)
Q Consensus 26 ~~~C~C~~Gy~~~~~~~C~--~--------~C~-----~~C~-~g~C~~~~~C~C~~Gy~g 70 (273)
.+.|.|.+||.|...+ |. . .|. ..|. +|.|+- |+|.|.++|.+
T Consensus 206 CG~C~C~~g~~G~~Ce-C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~~~ 264 (280)
T 2p26_A 206 CGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVP 264 (280)
T ss_dssp TTEEEECTTEESTTSC-EECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCSST
T ss_pred CCceeCCCCCcCCcce-ecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCCCC
Confidence 5689999999986432 11 0 343 2366 889986 89999988755
No 120
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=70.05 E-value=2.2 Score=33.91 Aligned_cols=28 Identities=32% Similarity=0.790 Sum_probs=21.7
Q ss_pred CCCC-CeecCC-----C-eeECCCCceeCCCCccccC
Q psy8491 173 NCTR-GYCLEP-----N-ECSCPYNFHLEGGMCMIAE 202 (273)
Q Consensus 173 ~C~n-G~C~~~-----~-~C~C~~Gy~G~~~~C~~~~ 202 (273)
+|+| |+|+.. + .|.|++||.| ..|++..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G--~~Cei~~ 48 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGG--QHCEIDK 48 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEES--TTSCEES
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCC--Cceeccc
Confidence 5777 799632 3 7999999999 8888753
No 121
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=69.34 E-value=2.3 Score=29.49 Aligned_cols=53 Identities=9% Similarity=0.061 Sum_probs=31.7
Q ss_pred cccccCCCCceeee-CCCCeeCCCCCCCCCCCCCCCCCEEcCCCeEEcCCCCeeCCCCCcc
Q psy8491 18 STSMSQDLRQAVIC-RFDLKFVNASYCAPVCSSPCINGACVFPEQCHCSPGFQFVNETYCE 77 (273)
Q Consensus 18 ~~~~~~~~~~~C~C-~~Gy~~~~~~~C~~~C~~~C~~g~C~~~~~C~C~~Gy~g~~~~~C~ 77 (273)
.+++++.++|.|.+ ..||.+..... .+...+..+ . ....|.+||++.....|+
T Consensus 17 ~~C~Nt~Gsy~C~~~~~g~~~~~~~~---~~~~~~~~~--~--~~~~C~~Gy~~~~~~~C~ 70 (71)
T 2kl7_A 17 MKCINHYGGYLCLPRSAAVINDLHGE---GPPPPVPPA--Q--HPNPCPPGYEPDDQDSCV 70 (71)
T ss_dssp EEEEETTCCEEEEETTSCCCSCCSCS---SCCCSSCSC--S--SCCCSCTTEEEECCCCSC
T ss_pred CEeECCCCCeEecccCCcccccccCC---ccccccccC--c--cccCCCCCeeeCCCCccc
Confidence 46899999999985 56787543211 112212222 1 245899999984434564
No 122
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=65.28 E-value=3.4 Score=31.74 Aligned_cols=42 Identities=10% Similarity=0.074 Sum_probs=27.6
Q ss_pred cCCCCeeeCCCCCCCCCCCCCCCCCeecCCCeeECCCCceeCCCCccc
Q psy8491 153 QCDVGYTLNPRTLYCEPECFNCTRGYCLEPNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 153 ~C~~Gy~g~~c~~~C~~~C~~C~nG~C~~~~~C~C~~Gy~G~~~~C~~ 200 (273)
.|++||+|..|+..=.. .|.+|. -..|++.+..++.| ..|+.
T Consensus 22 ~Cp~g~~G~~Ce~~~~~---~C~~g~-G~~YrG~~~~t~sG--~~Cq~ 63 (122)
T 2fd6_A 22 NCPKKFGGQHCEIDKSK---TCYEGN-GHFYRGKASTDTMG--RPCLP 63 (122)
T ss_dssp ECCTTEESTTSCEESSC---CSBCSS-CTTCCSCCCBBTTS--CBBCC
T ss_pred cCCCCCCCccccccCcC---CCcccc-cccceeeccccccC--CcccC
Confidence 78899999877632111 343331 12578888888888 88876
No 123
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=59.91 E-value=2.8 Score=38.84 Aligned_cols=24 Identities=33% Similarity=0.921 Sum_probs=18.0
Q ss_pred CCCCCCC-CCEEcCCCeEEcCCCCee
Q psy8491 46 VCSSPCI-NGACVFPEQCHCSPGFQF 70 (273)
Q Consensus 46 ~C~~~C~-~g~C~~~~~C~C~~Gy~g 70 (273)
.|+..|. ||.|++ ++|.|.+||.|
T Consensus 193 ~Cp~~CsGhG~C~~-g~C~Cd~G~~g 217 (387)
T 2ddu_A 193 PCPSYCSGHGDCIS-GVCFCDLGYTA 217 (387)
T ss_dssp CCGGGGGGSEEEET-TEEEECTTEEE
T ss_pred cCccccCCCceecC-CeEEecCCccc
Confidence 3555666 888876 78888888888
No 124
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=59.44 E-value=3.1 Score=32.78 Aligned_cols=11 Identities=27% Similarity=1.026 Sum_probs=6.5
Q ss_pred ceeeCCCcccC
Q psy8491 93 VCECESGFVHN 103 (273)
Q Consensus 93 ~C~C~~Gy~g~ 103 (273)
.|.|.+||.|+
T Consensus 141 ~c~C~~g~~g~ 151 (164)
T 3cfw_A 141 TCNCDVGYYGP 151 (164)
T ss_dssp EEEECTTCBSS
T ss_pred eeeeCCCcccc
Confidence 56666666653
No 125
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=58.44 E-value=3.5 Score=38.17 Aligned_cols=22 Identities=36% Similarity=1.047 Sum_probs=18.5
Q ss_pred CCCC-CceecCCCceeeCCCcccC
Q psy8491 81 ENCQ-HGTCTAPSVCECESGFVHN 103 (273)
Q Consensus 81 ~~C~-~G~C~~~~~C~C~~Gy~g~ 103 (273)
..|. ||.|++ +.|+|.+||.|+
T Consensus 196 ~~CsGhG~C~~-g~C~Cd~G~~g~ 218 (387)
T 2ddu_A 196 SYCSGHGDCIS-GVCFCDLGYTAA 218 (387)
T ss_dssp GGGGGSEEEET-TEEEECTTEEEE
T ss_pred cccCCCceecC-CeEEecCCcccC
Confidence 4454 899987 899999999994
No 126
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=57.77 E-value=3.4 Score=36.74 Aligned_cols=29 Identities=21% Similarity=0.458 Sum_probs=20.1
Q ss_pred CCC-CCEEcC---CCeEEcCCCCeeCCCCCcccC
Q psy8491 50 PCI-NGACVF---PEQCHCSPGFQFVNETYCEPY 79 (273)
Q Consensus 50 ~C~-~g~C~~---~~~C~C~~Gy~g~~~~~C~~~ 79 (273)
.|. ++.|++ .|.|.|++||+| ++..|.++
T Consensus 14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~G-nG~~C~d~ 46 (285)
T 1gl4_A 14 QCSVHAECRDYATGFCCRCVANYTG-NGRQCVAE 46 (285)
T ss_dssp GSCTTEEEEECSSCEEEEECTTEEE-CSSSEEET
T ss_pred CCCCCCEeEcCCCCeEEEcCCCCCC-CCCcCCCC
Confidence 465 678875 578888888887 33567643
No 127
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=54.81 E-value=3.2 Score=32.40 Aligned_cols=26 Identities=31% Similarity=0.708 Sum_probs=20.4
Q ss_pred CCCC-CeecC---CCeeECCCCceeCCCCccc
Q psy8491 173 NCTR-GYCLE---PNECSCPYNFHLEGGMCMI 200 (273)
Q Consensus 173 ~C~n-G~C~~---~~~C~C~~Gy~G~~~~C~~ 200 (273)
+|++ |.|.. .+.|.|.+||+| ..|+.
T Consensus 126 pc~~~g~C~~~~~~~~c~C~~g~~g--~~Ce~ 155 (157)
T 1g1t_A 126 SCSGHGECVETINNYTCKCDPGFSG--LKCEQ 155 (157)
T ss_dssp GGGGSEEEEEETTEEEEEECTTEES--TTSCE
T ss_pred CCCCCCEeecCCCCeeEECCCCccC--ccccc
Confidence 5544 78863 478999999999 88875
No 128
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=53.05 E-value=16 Score=36.97 Aligned_cols=15 Identities=47% Similarity=1.006 Sum_probs=12.0
Q ss_pred CcccccCCCCeeeCC
Q psy8491 148 PYCIIQCDVGYTLNP 162 (273)
Q Consensus 148 g~C~~~C~~Gy~g~~ 162 (273)
+.|...|++||+.+.
T Consensus 282 ~~Cv~~CP~g~~~~~ 296 (897)
T 2dtg_E 282 NKCIPECPSGYTMNS 296 (897)
T ss_dssp TEEESSCCSSCEECS
T ss_pred CEEccCCCCCccccC
Confidence 577779999998764
No 129
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=50.57 E-value=11 Score=34.94 Aligned_cols=7 Identities=57% Similarity=1.469 Sum_probs=3.8
Q ss_pred cCCCCee
Q psy8491 64 CSPGFQF 70 (273)
Q Consensus 64 C~~Gy~g 70 (273)
|.+||++
T Consensus 302 C~pGy~g 308 (403)
T 2y38_A 302 CCPGFNQ 308 (403)
T ss_dssp ECTTCCS
T ss_pred CCccccC
Confidence 5555554
No 130
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=48.17 E-value=6.6 Score=30.81 Aligned_cols=27 Identities=22% Similarity=0.743 Sum_probs=20.8
Q ss_pred CCC-CCeec---CCCeeECCCCceeCCCCcccc
Q psy8491 173 NCT-RGYCL---EPNECSCPYNFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~-nG~C~---~~~~C~C~~Gy~G~~~~C~~~ 201 (273)
+|. +|+|. ..+.|.|++||.| ..|+..
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~g--~~C~~~ 156 (164)
T 3cfw_A 126 SCSGHGECVEIINNYTCNCDVGYYG--PQCQFV 156 (164)
T ss_dssp SSCSSEEEEEETTEEEEEECTTCBS--SSSCBC
T ss_pred cCCCCCeecccCCCceeeeCCCccc--cccccc
Confidence 464 58886 3489999999999 788754
No 131
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=47.69 E-value=4.3 Score=31.61 Aligned_cols=10 Identities=40% Similarity=1.281 Sum_probs=5.3
Q ss_pred ceeeCCCccc
Q psy8491 93 VCECESGFVH 102 (273)
Q Consensus 93 ~C~C~~Gy~g 102 (273)
.|.|.+||+|
T Consensus 141 ~c~C~~g~~g 150 (157)
T 1g1t_A 141 TCKCDPGFSG 150 (157)
T ss_dssp EEEECTTEES
T ss_pred eEECCCCccC
Confidence 4555555555
No 132
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=40.08 E-value=16 Score=31.37 Aligned_cols=44 Identities=14% Similarity=0.197 Sum_probs=29.9
Q ss_pred cccccc---ccccccccCCCCceeeeCCCCeeC-CCCCCCCCCCCCCC
Q psy8491 9 DEYLLS---VIQSTSMSQDLRQAVICRFDLKFV-NASYCAPVCSSPCI 52 (273)
Q Consensus 9 ~~~~~~---~~~~~~~~~~~~~~C~C~~Gy~~~-~~~~C~~~C~~~C~ 52 (273)
++|.+. .|++.++++.+++.|.|.+||++. +...|.+.-+-.|+
T Consensus 3 ~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG 50 (283)
T 3f1s_B 3 NECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACG 50 (283)
T ss_dssp CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTT
T ss_pred CccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccccC
Confidence 345443 578888999999999999999875 35566553222344
No 133
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=36.76 E-value=14 Score=32.73 Aligned_cols=31 Identities=6% Similarity=0.139 Sum_probs=22.1
Q ss_pred cccccccccCCCCceeeeCCCCeeC-CCCCCC
Q psy8491 14 SVIQSTSMSQDLRQAVICRFDLKFV-NASYCA 44 (273)
Q Consensus 14 ~~~~~~~~~~~~~~~C~C~~Gy~~~-~~~~C~ 44 (273)
..|.+.++++.++|.|.|.+||... +...|.
T Consensus 8 ~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~ 39 (349)
T 3v64_C 8 GYCSQGCTNSEGAFQCWCEAGYELRPDRRSCK 39 (349)
T ss_dssp -CCSSEECCC---CCEECCTTEEECTTSSCEE
T ss_pred CCCcCeeecCCCCeEEECCCCccCCCCCCccc
Confidence 3588899999999999999999975 355664
No 134
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=35.45 E-value=16 Score=33.16 Aligned_cols=27 Identities=30% Similarity=0.819 Sum_probs=22.0
Q ss_pred CCCC-CeecC---CCeeECCC-CceeCCCCcccc
Q psy8491 173 NCTR-GYCLE---PNECSCPY-NFHLEGGMCMIA 201 (273)
Q Consensus 173 ~C~n-G~C~~---~~~C~C~~-Gy~G~~~~C~~~ 201 (273)
+|+| |+|.. .+.|.|+. ||.| ..|+..
T Consensus 192 pC~n~g~C~~~~~~~~C~C~~~~~~G--~~C~~~ 223 (410)
T 3asi_A 192 SCSNQGVCLQQWDGFSCDCSMTSFSG--PLCNDP 223 (410)
T ss_dssp SSSTTCEEEECSSSEEEECTTTSEES--TTSCEE
T ss_pred cCCCCCEecCCCCCceEeccCCcccC--CCCCCC
Confidence 7877 79974 47999996 9999 899864
No 135
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=34.91 E-value=12 Score=36.23 Aligned_cols=26 Identities=38% Similarity=0.953 Sum_probs=20.1
Q ss_pred CCCC-CCEEcC----CCeEEcC-CCCeeCCCCCcc
Q psy8491 49 SPCI-NGACVF----PEQCHCS-PGFQFVNETYCE 77 (273)
Q Consensus 49 ~~C~-~g~C~~----~~~C~C~-~Gy~g~~~~~C~ 77 (273)
.+|. +|.|.+ .|+|.|. +||+| ..|+
T Consensus 8 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G---~~Ce 39 (553)
T 1q4g_A 8 YPCQHQGICVRFGLDRYQCDCTRTGYSG---PNCT 39 (553)
T ss_dssp CCCCTTCEEEEETTTEEEEECTTSSEET---TTTC
T ss_pred CCCCCCCCcCCCCCCceEeeCCCCCcCC---CCCC
Confidence 4677 578876 4789999 99999 6676
No 136
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=34.26 E-value=19 Score=23.39 Aligned_cols=17 Identities=35% Similarity=1.021 Sum_probs=12.3
Q ss_pred eeECCCCceeCC-CCccc
Q psy8491 184 ECSCPYNFHLEG-GMCMI 200 (273)
Q Consensus 184 ~C~C~~Gy~G~~-~~C~~ 200 (273)
.|.|++||..++ ..|..
T Consensus 35 GC~C~~G~v~~~~g~CV~ 52 (56)
T 1ccv_A 35 GCQCQEGFLRNGEGACVL 52 (56)
T ss_dssp EEEECTTCEEETTTEEEC
T ss_pred CCcCCCCeeECCCCcccC
Confidence 399999999865 35543
No 137
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=34.06 E-value=16 Score=35.72 Aligned_cols=26 Identities=35% Similarity=0.967 Sum_probs=20.3
Q ss_pred CCCC-CCEEcC----CCeEEcC-CCCeeCCCCCcc
Q psy8491 49 SPCI-NGACVF----PEQCHCS-PGFQFVNETYCE 77 (273)
Q Consensus 49 ~~C~-~g~C~~----~~~C~C~-~Gy~g~~~~~C~ 77 (273)
.+|. +|+|++ .|+|.|. +||+| ..|+
T Consensus 7 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G---~~Ce 38 (587)
T 3nt1_A 7 NPCQNRGECMSTGFDQYKCDCTRTGFYG---ENCT 38 (587)
T ss_dssp CCCCTTCEEEEEETTEEEEECTTSSEET---TTTC
T ss_pred CCCCCCCEeeCCCCCCeEEecCCCCccC---CCCC
Confidence 5687 578983 4789999 99999 6676
No 138
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=28.15 E-value=31 Score=27.08 Aligned_cols=25 Identities=36% Similarity=0.848 Sum_probs=18.1
Q ss_pred CCC-CCEEcCC-----C-eEEcCCCCeeCCCCCcc
Q psy8491 50 PCI-NGACVFP-----E-QCHCSPGFQFVNETYCE 77 (273)
Q Consensus 50 ~C~-~g~C~~~-----~-~C~C~~Gy~g~~~~~C~ 77 (273)
+|. +|+|+.. + +|.|.+||.| ..|+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G---~~Ce 45 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGG---QHCE 45 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEES---TTSC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCC---Ccee
Confidence 476 5788642 2 7999999998 6666
No 139
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=27.71 E-value=21 Score=28.19 Aligned_cols=23 Identities=26% Similarity=0.668 Sum_probs=13.7
Q ss_pred EEcC---CCeEEcCCCCee-CCCCCcc
Q psy8491 55 ACVF---PEQCHCSPGFQF-VNETYCE 77 (273)
Q Consensus 55 ~C~~---~~~C~C~~Gy~g-~~~~~C~ 77 (273)
.|.+ .+.|+|.+||++ .+...|+
T Consensus 140 ~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 140 HCHNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred ccccCCCCEEEeCCCCcEECCCCCccc
Confidence 4654 357888888876 2334454
No 140
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=24.22 E-value=31 Score=33.29 Aligned_cols=26 Identities=23% Similarity=0.786 Sum_probs=0.0
Q ss_pred CC-CCCeec----CCCeeECCCCceeCCCCc
Q psy8491 173 NC-TRGYCL----EPNECSCPYNFHLEGGMC 198 (273)
Q Consensus 173 ~C-~nG~C~----~~~~C~C~~Gy~G~~~~C 198 (273)
+| .|+.|+ +.+.|.|+.||.|++..|
T Consensus 28 ~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c 58 (551)
T 3fby_A 28 ECHEHADCVLERDGSRSCVCAVGWAGNGILC 58 (551)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEESSSSSC
T ss_pred CCCCCCeeEeCCCCCEecCCCCCCCCCCccc
No 141
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=23.44 E-value=46 Score=30.79 Aligned_cols=17 Identities=18% Similarity=0.200 Sum_probs=13.9
Q ss_pred CCeeE-CCCCceeCCCCccc
Q psy8491 182 PNECS-CPYNFHLEGGMCMI 200 (273)
Q Consensus 182 ~~~C~-C~~Gy~G~~~~C~~ 200 (273)
.++|. |..++.| ..|+.
T Consensus 356 ~G~C~~C~~nt~G--~~CEr 373 (403)
T 2y38_A 356 GGVCLDCQHHTTG--INCER 373 (403)
T ss_dssp CEEESSCCSSEES--TTSCE
T ss_pred CCCCCCCcCcCcC--CCCCc
Confidence 47895 9999999 88875
No 142
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=20.79 E-value=76 Score=18.31 Aligned_cols=23 Identities=30% Similarity=0.725 Sum_probs=13.4
Q ss_pred CCCCCCCC--CCCCCEEcCCCeEEcC
Q psy8491 42 YCAPVCSS--PCINGACVFPEQCHCS 65 (273)
Q Consensus 42 ~C~~~C~~--~C~~g~C~~~~~C~C~ 65 (273)
.|.+.|.. ...+|.|++ +.|.|.
T Consensus 6 ~C~~~Ck~~~g~~~gKC~N-gkC~Cy 30 (31)
T 1cmr_A 6 ECWSVCQRLHNTSKGWCDH-RGCICE 30 (31)
T ss_dssp GSSSSSTTTSSCCCCCEET-TEECCC
T ss_pred HHHHHHHHHhCCCCCceeC-CCceeC
Confidence 35555532 233778877 677774
No 143
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=20.53 E-value=45 Score=35.16 Aligned_cols=31 Identities=29% Similarity=0.782 Sum_probs=24.4
Q ss_pred CCC--CCCC-CeecC---CCeeECC-CCceeCCCCccccC
Q psy8491 170 ECF--NCTR-GYCLE---PNECSCP-YNFHLEGGMCMIAE 202 (273)
Q Consensus 170 ~C~--~C~n-G~C~~---~~~C~C~-~Gy~G~~~~C~~~~ 202 (273)
.|. +|+| |+|.. .+.|.|+ +||.| ..|+...
T Consensus 1019 ~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G--~~C~~~~ 1056 (1245)
T 3qcw_A 1019 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSG--PLCNDPG 1056 (1245)
T ss_dssp CCCTTSSSSSCEEEEETTEEEEECTTSSCBS--TTSCBCC
T ss_pred ceECCcCCCCCEeCCCCCCCEEECCCCCCCC--CCccCCC
Confidence 465 7877 79973 4799999 69999 9997753
No 144
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=20.11 E-value=1.4e+02 Score=19.14 Aligned_cols=17 Identities=18% Similarity=0.610 Sum_probs=11.5
Q ss_pred eeECCCC--ceeC-CCCccc
Q psy8491 184 ECSCPYN--FHLE-GGMCMI 200 (273)
Q Consensus 184 ~C~C~~G--y~G~-~~~C~~ 200 (273)
.|.|++| |..+ +..|.+
T Consensus 37 GC~C~~Gtv~v~~~~~~CV~ 56 (60)
T 1hx2_A 37 RCGCISGTVLKSKDSSECVH 56 (60)
T ss_dssp EEEECTTCEESSTTCSSEEC
T ss_pred CCCCCCCCeeEECCCCCEec
Confidence 5999999 7664 445543
Done!