BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy8497
         (2355 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|307205525|gb|EFN83831.1| Probable ATP-dependent RNA helicase DDX20 [Harpegnathos saltator]
          Length = 1226

 Score =  343 bits (880), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 205/521 (39%), Positives = 300/521 (57%), Gaps = 18/521 (3%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AHDI K  RT D+    +V F    L EK I  GL   GF + SPIQ+ A P    G+D 
Sbjct: 6   AHDINKKLRTSDIKIQENVTFLEMGLPEK-IMDGLSFAGFERPSPIQLKAIPIGRCGFDL 64

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           I+++KSGTGK+ VF + AL +++ + +  PQ +I+APTREIA+QI++V++++G+ +K L 
Sbjct: 65  ILRAKSGTGKTAVFGIIAL-EILDIQISSPQVLIVAPTREIAIQISNVLKTIGSEIKGLK 123

Query: 122 VDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF 178
           V+YF+GG  VE  K+ +    + VG+PGRIK +I  K L + +VRLF++DEADKL+ T F
Sbjct: 124 VEYFVGGLSVEDDKKRLNECHVAVGAPGRIKHLIDKKLLKVSTVRLFVLDEADKLMETNF 183

Query: 179 VEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVAL 238
            +DI +I+S+L   KQ++  SATY  D    L+ YM  P+LI P+     L+G+KQ + +
Sbjct: 184 QKDINYIFSKLSLNKQVIASSATYPGDLEKFLEMYMCSPVLISPDLDGPILVGIKQFLVV 243

Query: 239 IPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
           +    N   +   +  +L ++ ++ PF Q ++FSNYQ R + +   L +  F + Y+ G+
Sbjct: 244 VSSHLNAMKQVQIKVDELQKIFTKIPFKQSLVFSNYQSRAQSVSNKLNSMGFSSTYIIGS 303

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
           QD   RL  ++  +    RIL+TTDL ARGID  NV+LVINL+IP DAATYLHR+GRAGR
Sbjct: 304 QDMAKRLEIMEKLRNFNCRILMTTDLTARGIDVENVNLVINLDIPMDAATYLHRIGRAGR 363

Query: 359 YGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPD---NLTGDQINWTQRVQTLLA 415
           YGT G+ ITIVS   L  F  L+  +   + +   L PD   ++  D I   ++V    +
Sbjct: 364 YGTHGISITIVSENELQSFRELLISVGGPNFYLFKLGPDYVEDVWADNITVFEKVY---S 420

Query: 416 KPLDQAQEREDVEQTAEESSKVENTKPLRGAPSKEVTKKGASKEGTKWNLTDGQSEEESD 475
           KP     E  D+++   ES   EN  P+    + E T    S   +K   T+  S E S 
Sbjct: 421 KPEANGTELSDIDKGILES---ENGTPM-AILTSENTTFSTSSYNSKHIDTNTCSLENSG 476

Query: 476 SENDGKPDENGSQRGSKRSKEFKTQEKCVKGAGEDENGDRK 516
           + N      NG+Q  SK        +KC K    +    RK
Sbjct: 477 TNNTANL-SNGNQNKSKSI--LSKDKKCDKAITNETYTKRK 514


>gi|260799081|ref|XP_002594528.1| hypothetical protein BRAFLDRAFT_87751 [Branchiostoma floridae]
 gi|229279762|gb|EEN50539.1| hypothetical protein BRAFLDRAFT_87751 [Branchiostoma floridae]
          Length = 1005

 Score =  339 bits (870), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 171/372 (45%), Positives = 244/372 (65%), Gaps = 6/372 (1%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AH +++  RT+DVL+     F + +L+ +P+++GL + GF + SPIQ+ A P    G D 
Sbjct: 10  AHKLREGWRTEDVLNTEGADFAS-LLLSEPVQRGLTQAGFERPSPIQLKAIPLGRCGLDL 68

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           IVQ+KSGTGK+ VF V AL  L+ L     Q ++LAPTREIAVQI DVV S+G  +  L 
Sbjct: 69  IVQAKSGTGKTCVFAVIALESLV-LETFSTQVLVLAPTREIAVQIHDVVVSIGQAMTGLK 127

Query: 122 VDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG- 177
              FIGG  V   K   R   I +GSPGRIKQ+I+L  L   S+RLF++DEADKL+ TG 
Sbjct: 128 CHVFIGGLPVHEDKQRLRKCHIAIGSPGRIKQLIELGVLKTTSIRLFVLDEADKLLETGS 187

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F E I WIYS LP  KQM+ +SATY       LQ YM DP  +R +     L G+KQ  +
Sbjct: 188 FQEQINWIYSSLPDNKQMVALSATYPESLAHHLQVYMRDPTFVRLDIQDLSLKGIKQFYS 247

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
           +IP+  + S  +  +  +L++LLS+ PF+QC++FSN Q R + +C++L +  +   Y++G
Sbjct: 248 VIPQQSSMSKAFQAKTDQLIKLLSRVPFHQCLVFSNDQGRAQSLCKDLNSKGWPTAYIAG 307

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
           +Q+Q  RL ++   +  + R+LV+TDL ARGIDA  V+LV+NL++P D  TY+HR+GRAG
Sbjct: 308 SQEQTERLNAMSQLRNFQCRVLVSTDLTARGIDAEKVNLVVNLDVPQDWETYMHRIGRAG 367

Query: 358 RYGTRGLVITIV 369
           R+GT+G  +T+V
Sbjct: 368 RFGTQGAAVTLV 379


>gi|322799954|gb|EFZ21080.1| hypothetical protein SINV_07642 [Solenopsis invicta]
          Length = 1251

 Score =  339 bits (870), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 169/400 (42%), Positives = 256/400 (64%), Gaps = 7/400 (1%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AHDI K  RT D+    +V F+  + + + I  GL   GF K SPIQ+ A P    G+D
Sbjct: 5   IAHDINKKQRTNDIKIEENVTFD-QMRLPQEILDGLMSAGFNKPSPIQLKAIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IV++KSGTGK++VF V AL  L  + +Q PQ +I+APTREIA+QIT V++++G+ ++ L
Sbjct: 64  LIVRAKSGTGKTLVFSVIALETL-NISIQLPQVLIVAPTREIAIQITYVIKAIGSQIEGL 122

Query: 121 HVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            ++YF+GG  +E  K+ +    + +G+PGRI+ +I+  +L +  VRLF++DEADKL+   
Sbjct: 123 GIEYFVGGISIEEDKKKLNKCHVAIGAPGRIRHLIEKGFLQVSKVRLFVLDEADKLLEIS 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F +DI +I+S+LP  KQ++  SATY  D    LQ YM  P+L  P      L+G+KQ V 
Sbjct: 183 FQKDINFIFSKLPSSKQVIASSATYPGDLETFLQTYMSSPILTSPNIDGPVLVGIKQFVV 242

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
           ++P   N   +   +  +LV++ ++ PF Q +IFSNYQ R + +   + +  F + Y++G
Sbjct: 243 IVPAHPNVMKQVQTKVDELVKIFTKIPFKQSLIFSNYQSRAQSVSNKINSLGFSSSYIAG 302

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
            Q    RL ++++ +  + RI++TTDL ARGID  NV++VINL+IP D ATYLHR+GRAG
Sbjct: 303 NQVMTKRLEAIENLRNLECRIMLTTDLTARGIDIENVNMVINLDIPTDPATYLHRIGRAG 362

Query: 358 RYGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPD 397
           RYG+ G+ ITI+S   L     L+  I L++ F +   PD
Sbjct: 363 RYGSYGISITIISENELSSLKKLLTSIGLNYLFKLN--PD 400


>gi|383853237|ref|XP_003702129.1| PREDICTED: uncharacterized protein LOC100882286 [Megachile
           rotundata]
          Length = 1129

 Score =  336 bits (862), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 172/387 (44%), Positives = 250/387 (64%), Gaps = 5/387 (1%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AHDI K  RTKD+    DV F      +K I  GL   GF K SPIQ+ A P    G+D
Sbjct: 5   IAHDICKKPRTKDIKIQEDVTFFQMGFSQK-ILDGLSVCGFQKPSPIQLKAIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I+++KSGTGK++VF V AL +++ + V   Q +ILAPTREIA+QI+ V+ SVG  +K L
Sbjct: 64  LIMRAKSGTGKTLVFSVIAL-EMLDVQVLSIQVLILAPTREIAIQISQVISSVGCEMKGL 122

Query: 121 HVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            V+ FIGG  +   K+ +    + VG+PGRI+ +I    LN++++RLF++DEADKL+ T 
Sbjct: 123 KVEVFIGGIAINEDKKKLNGCHVAVGAPGRIRHLIDKGILNVENIRLFVLDEADKLMETS 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F +DI +I+S+LP  KQ++  SATY  D    LQ YM  P++   ++    L+G+KQ VA
Sbjct: 183 FQKDINFIFSKLPINKQVIASSATYLGDLETFLQTYMCSPVVTSSDNDEPILVGLKQFVA 242

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
           ++P   N   +   +  +L ++L+  PF QC+ FSNYQ R + +C  + +  F A Y++G
Sbjct: 243 IVPFHPNAMKQVQIKVDELTKILNSVPFKQCLAFSNYQSRAQSVCNKIISMGFSATYIAG 302

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
            QD   RL +++  K  K RI++TTDL ARGID  NV+LV+NL++P+DA TYLHR+GRAG
Sbjct: 303 NQDMTKRLDAINKLKSFKCRIMITTDLTARGIDVDNVNLVVNLDLPNDAPTYLHRIGRAG 362

Query: 358 RYGTRGLVITIVSAESLVKFHSLMGEI 384
           RYG+ G+ ITIV+   +  F  L+  +
Sbjct: 363 RYGSYGISITIVAENEIETFKELLNSV 389


>gi|390339493|ref|XP_793570.2| PREDICTED: uncharacterized protein LOC588813 [Strongylocentrotus
           purpuratus]
          Length = 1190

 Score =  334 bits (856), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 174/376 (46%), Positives = 242/376 (64%), Gaps = 11/376 (2%)

Query: 2   AHDIQKCARTKDVL----SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLN 57
           AH I +  RT DVL    SN+D    + + + +P+  GLQ+ GF K SPIQ+ A P    
Sbjct: 19  AHAINERERTSDVLTEENSNVDF---SSMFLSEPVTAGLQKVGFEKPSPIQLKAIPLGRC 75

Query: 58  GYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHV 117
           G D IVQ+KSGTGK+ VF V AL   I L     Q +ILAPTREIAVQI D +R++G  +
Sbjct: 76  GLDLIVQAKSGTGKTCVFSVIALEG-IDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEM 134

Query: 118 KNLHVDYFIGGTQV--ERPK-RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI 174
           + L    FIGGT    +R K +   I VG+PGRIKQ+I+ + L   ++RLF++DEADKL+
Sbjct: 135 EGLRSHVFIGGTLFGPDRQKLKKCHIAVGTPGRIKQLIEYEVLKTGTIRLFVLDEADKLL 194

Query: 175 NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ 234
           +  F E + WIY+ L   KQML +SATY       L KYM +P+ +R       L G+KQ
Sbjct: 195 DDTFQEQVNWIYNHLSDNKQMLALSATYPEYLAKHLTKYMREPMFVRLNPKDLALRGIKQ 254

Query: 235 LVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
           L   +P    P+  +  +  KL+++L+Q  FNQC+IFSN Q R + +C+ L ++ + +E 
Sbjct: 255 LYVELPGHSLPNKAFEIKVIKLLKILTQVSFNQCLIFSNLQTRAQNLCDILCDSGWPSEC 314

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SGAQ+Q  RL+++   K+ + RIL++TDL ARGIDA NV+L+INL+IP D  TYLHR+G
Sbjct: 315 ISGAQEQSQRLSAMAKLKKFQCRILISTDLTARGIDAENVNLIINLDIPTDTKTYLHRIG 374

Query: 355 RAGRYGTRGLVITIVS 370
           RAGR+GT G  I++ S
Sbjct: 375 RAGRFGTHGAAISLAS 390


>gi|350421869|ref|XP_003492983.1| PREDICTED: hypothetical protein LOC100742995 [Bombus impatiens]
          Length = 1079

 Score =  331 bits (848), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 168/387 (43%), Positives = 248/387 (64%), Gaps = 5/387 (1%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AHDI K  RTKD+    D+ F      +K I  GL   GF + SPIQ+ A P    G+D
Sbjct: 5   IAHDIDKKPRTKDIKVQEDITFYQMGFSQK-ILDGLSLCGFQRPSPIQLKAIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IV++KSGTGK++VF + +L ++I + +   Q ++LAPTREIAVQI  V  SV   ++ L
Sbjct: 64  LIVRAKSGTGKTLVFCIISL-EMIDIDISSVQVLVLAPTREIAVQIAQVFSSVACEIEGL 122

Query: 121 HVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            V+ FIGGT +E  ++ +    I VG+PGRI+ +I  ++L +++VRLFI+DEADKL+ T 
Sbjct: 123 KVEVFIGGTAIESDRKKLNNCHIAVGAPGRIRHLIDKEFLKVENVRLFILDEADKLMETS 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F +DI +I+S+LP  KQ++  SATY  D    LQ YM  P+L  P++    L+G+ Q + 
Sbjct: 183 FQKDINYIFSKLPLSKQVIASSATYPGDLEIFLQAYMCSPVLASPDNNEPILVGLTQFIT 242

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
           ++P   N   +   +  +L+++ ++ PF Q ++FSNYQ R + +C  ++   F A + +G
Sbjct: 243 VVPSHPNVMKQVQIKVDELIKIFNKIPFKQSLVFSNYQSRAQSVCNKISAMGFKATFFAG 302

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
            QD   RL +++  K  K +I+VTTDL ARGIDA NV+LV+NL++P DA TYLHR+GRAG
Sbjct: 303 NQDMNKRLEAINKLKTFKCKIMVTTDLTARGIDADNVNLVVNLDLPIDAPTYLHRIGRAG 362

Query: 358 RYGTRGLVITIVSAESLVKFHSLMGEI 384
           RYG+ GL ITI++   L     L+  I
Sbjct: 363 RYGSYGLSITIIAENELETLKKLLMSI 389


>gi|328785812|ref|XP_394691.4| PREDICTED: hypothetical protein LOC411217 [Apis mellifera]
          Length = 1084

 Score =  330 bits (846), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 168/387 (43%), Positives = 251/387 (64%), Gaps = 5/387 (1%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AHDI K  RTKD+    DV F      +K I  GL   GF + SPIQ+ A P    G+D
Sbjct: 5   IAHDINKKPRTKDIKIQDDVTFFQMGFSQK-ILDGLSVCGFQRPSPIQLKAIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I+++KSGTGK++VF + +L ++I + +   Q +ILAPTREIAVQI  V  SVG  +K+L
Sbjct: 64  LIMRAKSGTGKTLVFCIISL-EMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDL 122

Query: 121 HVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            V+ FIGG  +E  K+ V   QI VG+PGRI+ +I   +L +++VRLF++DEADKL+ T 
Sbjct: 123 KVEVFIGGLAIENDKKKVNNCQIAVGAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETS 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F +DI +I+S+LP  KQ++  SATY  D    LQ YM  P+L+ P +    L+G++Q V 
Sbjct: 183 FQKDINYIFSKLPLSKQVIASSATYPGDLEIFLQTYMCSPVLVSPNNNEPILIGLRQFVT 242

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
           ++P   N   +   +  +L+++ ++ PF Q ++FSNYQ R + +C  + +  F A +++G
Sbjct: 243 IVPSHPNAMKQVQIKVDELIKIFNKVPFKQSLVFSNYQSRAQSVCNKINSIGFTATFIAG 302

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
            Q+   RL +++  K  K +I++TTDL ARGIDA NV+LV+NL++P DA TYLHR+GRAG
Sbjct: 303 NQNMNKRLEAINKLKTFKCKIMLTTDLTARGIDADNVNLVVNLDLPTDAPTYLHRIGRAG 362

Query: 358 RYGTRGLVITIVSAESLVKFHSLMGEI 384
           RYG+ G+ ITI++   +     L+  +
Sbjct: 363 RYGSYGISITIIAENEIETLKQLLTSV 389


>gi|345495557|ref|XP_001604556.2| PREDICTED: hypothetical protein LOC100120961 [Nasonia vitripennis]
          Length = 1001

 Score =  328 bits (841), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 165/387 (42%), Positives = 250/387 (64%), Gaps = 5/387 (1%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AH++    RT D+    DV F + + + + +  GL   GF K SPIQ  + P    G+D
Sbjct: 5   IAHNLSAKERTSDIEIQEDVTF-SQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IV++KSGTGK+ VF + AL ++I + +   Q IILAPTREIA+QI +V+ S+G  +K L
Sbjct: 64  LIVRAKSGTGKTAVFGIIAL-EMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGL 122

Query: 121 HVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            V+ FIGG  ++  ++ +    I +G+PGR+K +I   YL MD VRLF++DEADKL+   
Sbjct: 123 KVESFIGGVAMDIDRKKLSNCHIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEES 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F +DI +IY++LPP +Q++  SATY  D    L+ YM  P+L   ++    L+G++Q  +
Sbjct: 183 FQKDINYIYAKLPPNRQVISSSATYPGDLEIFLESYMQSPILSSADNDGPILVGLRQFAS 242

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
           ++P+  N   +   + ++L+++  + PF QC++F+NYQ R + +C  + +  F A ++ G
Sbjct: 243 IVPQHLNAMRQVQIKVEELIKIFKKVPFKQCLVFTNYQTRAQSVCNKITSMGFPAIFIVG 302

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
            Q+   RL ++   K  K RIL+TTDL ARGIDA NV+LVINL+IP D+ATYLHR+GRAG
Sbjct: 303 NQNMNKRLDAMKKLKNFKCRILLTTDLTARGIDAENVNLVINLDIPSDSATYLHRIGRAG 362

Query: 358 RYGTRGLVITIVSAESLVKFHSLMGEI 384
           RYG+RG+ I IV+ + L  F  L+  I
Sbjct: 363 RYGSRGIAINIVAEKELNMFQDLLQSI 389


>gi|332026566|gb|EGI66684.1| Putative ATP-dependent RNA helicase DDX20 [Acromyrmex echinatior]
          Length = 1250

 Score =  327 bits (839), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 157/356 (44%), Positives = 235/356 (66%), Gaps = 4/356 (1%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I  GL   GF K SPIQ+ A P    G+D IV++KSGTGK+IVF V AL+ ++ + V  P
Sbjct: 7   ILDGLMSAGFQKPSPIQLKAIPLGRYGFDLIVRAKSGTGKTIVFGVIALD-ILDILVGSP 65

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV---QIVVGSPGRI 148
           Q +I+APTREIA+QIT V++++G+ ++ L V+YF+GG  +E  K+ +    I VG+PGR+
Sbjct: 66  QVLIIAPTREIAIQITYVIKTIGSKIEGLRVEYFVGGISIEEDKKKLSKCHIAVGAPGRV 125

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLA 208
           K +I+  +L +  ++LF++DEADKL+   F +DI +I+S+LP  KQ++  SATY  D   
Sbjct: 126 KHLIEKGFLQVSKIKLFVLDEADKLMEINFQKDINYIFSKLPSSKQIIASSATYPGDLET 185

Query: 209 TLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQC 268
            LQ YM  P+L  P      L+G+KQ VA++P   N   +   +  +LV++ ++ PF Q 
Sbjct: 186 FLQTYMSSPVLTSPNIDGPVLIGIKQFVAVVPTHPNMMKQVQTKIDELVKIFTKIPFKQS 245

Query: 269 VIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARG 328
           ++FSNYQ R + +   + +  F + Y+ G QD   RL ++++ +  + RI++TTDL ARG
Sbjct: 246 LVFSNYQSRAQSVSNKINSLGFSSSYIVGNQDMTKRLETIENLRNLEYRIMLTTDLTARG 305

Query: 329 IDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEI 384
           ID  NV++VINL+IP D ATYLHR+GRAGRYG+ G+ +TIV+   L  F  L+  I
Sbjct: 306 IDIENVNMVINLDIPTDPATYLHRIGRAGRYGSYGISVTIVTENELSSFRKLLISI 361


>gi|198435536|ref|XP_002132135.1| PREDICTED: similar to Probable ATP-dependent RNA helicase DDX20
           (DEAD box protein 20) [Ciona intestinalis]
          Length = 779

 Score =  320 bits (821), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 167/391 (42%), Positives = 244/391 (62%), Gaps = 9/391 (2%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AHD+    RT D+ +   V FE D+L+   +  GL+++GF K SPIQ+ A P    G+D
Sbjct: 5   IAHDLDSKTRTDDIAAQESVTFE-DILVSDFVLSGLKKSGFHKPSPIQLKAIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            +VQ+KSGTGK+ VF V AL+  I       Q I+LAPTREIA+QI +VV ++G  ++ L
Sbjct: 64  LVVQAKSGTGKTCVFSVIALDS-IDAKSAALQVIVLAPTREIALQIHEVVSTIGQDIEQL 122

Query: 121 HVDYFIGGTQV----ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V  FIGGT V    ++ KR   I +GSPGRIKQ+I L  L +++VRLF++DEADKL+  
Sbjct: 123 SVQVFIGGTLVSEDRQKAKR-CHIAIGSPGRIKQLISLGVLAVNNVRLFVLDEADKLVEE 181

Query: 177 G-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQL 235
           G   + I WIYS LP  KQML +SATY       L KYM  P  +R       LLG+KQ 
Sbjct: 182 GGLQQQINWIYSSLPSTKQMLALSATYPEALAKFLTKYMQQPTFVRLNPTDPSLLGLKQY 241

Query: 236 VALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
             L+ ECK P   + ++ + ++++LS   + Q ++FSNY  R E +C  L ++ + + ++
Sbjct: 242 YLLVKECKLPHQLFEEKTRCIIEILSSMTYQQALLFSNYHTRAETLCNALNSSGWRSTFI 301

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
           SG  +Q  R  ++   K  + RIL++TDL +RGIDA NVD+VIN+++P D  TY+HR+GR
Sbjct: 302 SGNMEQWRRTEAITRLKSYQCRILISTDLTSRGIDAQNVDVVINMDVPTDWETYMHRIGR 361

Query: 356 AGRYGTRGLVITIVS-AESLVKFHSLMGEIN 385
           AGR+G  G  +++VS      + H++  + N
Sbjct: 362 AGRFGAYGTAVSLVSPGVEASRLHAIAAQCN 392


>gi|189235557|ref|XP_968432.2| PREDICTED: similar to predicted protein [Tribolium castaneum]
          Length = 723

 Score =  320 bits (820), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 177/392 (45%), Positives = 243/392 (61%), Gaps = 14/392 (3%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AHD+    RTKDV+ + ++ F + +L+   I+QGL  +GF K SPIQ  A P    G+D
Sbjct: 5   IAHDLDAKERTKDVILDENISFAS-LLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IV+SKSGTGK++VF   AL   +       Q +IL PTREIAVQI DV+RSVG HV  L
Sbjct: 64  LIVKSKSGTGKTLVFSTIALET-VNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGL 122

Query: 121 HVDYFIGGTQVE---RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            ++ FIGG  +E   +      I VG+PGR+K ++K+  L  + V+LF++DEADKL+   
Sbjct: 123 KIESFIGGRPLEDDLKKSSKCHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEES 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F  DI  IY+ LPP KQM+V SATY  +    L  YM  P  +  E+ T  LLG+KQ  A
Sbjct: 183 FQSDINEIYNSLPPRKQMIVSSATYPQELDTFLANYMQSPTHVTSENETPLLLGLKQFAA 242

Query: 238 LIPECKNPSLRYVDEEK----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAE 293
           ++     P L  V + K     L+ +L++  F QC++F+NYQ R E +   L    + + 
Sbjct: 243 ML----RPGLNSVQQMKIKNDLLITILTKVSFVQCLVFTNYQSRTETVSNYLNQKGWDSV 298

Query: 294 YLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRM 353
           ++S AQ Q  RL ++D+ K+ K RIL++TDL +RGIDA NVDLVIN ++P DA TYLHRM
Sbjct: 299 FISAAQKQTERLEAIDNLKKFKNRILLSTDLTSRGIDAPNVDLVINYDLPCDAVTYLHRM 358

Query: 354 GRAGRYGTRGLVITIVS-AESLVKFHSLMGEI 384
           GRAGRYG+ GL I  VS    + K   ++G I
Sbjct: 359 GRAGRYGSGGLCINFVSEGPEVTKLQHILGAI 390


>gi|270004341|gb|EFA00789.1| hypothetical protein TcasGA2_TC003675 [Tribolium castaneum]
          Length = 688

 Score =  319 bits (817), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 177/392 (45%), Positives = 243/392 (61%), Gaps = 14/392 (3%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AHD+    RTKDV+ + ++ F + +L+   I+QGL  +GF K SPIQ  A P    G+D
Sbjct: 5   IAHDLDAKERTKDVILDENISFAS-LLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IV+SKSGTGK++VF   AL   +       Q +IL PTREIAVQI DV+RSVG HV  L
Sbjct: 64  LIVKSKSGTGKTLVFSTIALET-VNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGL 122

Query: 121 HVDYFIGGTQVE---RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            ++ FIGG  +E   +      I VG+PGR+K ++K+  L  + V+LF++DEADKL+   
Sbjct: 123 KIESFIGGRPLEDDLKKSSKCHIAVGAPGRVKHLLKMGALTTNLVKLFVLDEADKLMEES 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F  DI  IY+ LPP KQM+V SATY  +    L  YM  P  +  E+ T  LLG+KQ  A
Sbjct: 183 FQSDINEIYNSLPPRKQMIVSSATYPQELDTFLANYMQSPTHVTSENETPLLLGLKQFAA 242

Query: 238 LIPECKNPSLRYVDEEK----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAE 293
           ++     P L  V + K     L+ +L++  F QC++F+NYQ R E +   L    + + 
Sbjct: 243 ML----RPGLNSVQQMKIKNDLLITILTKVSFVQCLVFTNYQSRTETVSNYLNQKGWDSV 298

Query: 294 YLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRM 353
           ++S AQ Q  RL ++D+ K+ K RIL++TDL +RGIDA NVDLVIN ++P DA TYLHRM
Sbjct: 299 FISAAQKQTERLEAIDNLKKFKNRILLSTDLTSRGIDAPNVDLVINYDLPCDAVTYLHRM 358

Query: 354 GRAGRYGTRGLVITIVS-AESLVKFHSLMGEI 384
           GRAGRYG+ GL I  VS    + K   ++G I
Sbjct: 359 GRAGRYGSGGLCINFVSEGPEVTKLQHILGAI 390


>gi|334324422|ref|XP_001382008.2| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Monodelphis
           domestica]
          Length = 808

 Score =  313 bits (802), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 177/416 (42%), Positives = 249/416 (59%), Gaps = 8/416 (1%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHD+    ART DVL      F   +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 27  AHDVGGPRARTGDVLLAEPADF-GSLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 85

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 86  LIVQAKSGTGKTCVFSTVALDSLI-LENLATQILILAPTREIAVQIHSVITAIGIKMEGL 144

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 145 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEG 204

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY     + L +YM DP  +R   +   L+G+KQ  
Sbjct: 205 SFQEQINWIYSSLPANKQMLAVSATYPEFLASALTRYMRDPTFVRLNSSDPSLIGLKQYY 264

Query: 237 ALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
            ++     P   + ++ + L +L S+ PFNQ ++FSN   R + + + L++  F AE +S
Sbjct: 265 KVVNSHPLPHKIFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECIS 324

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRA
Sbjct: 325 GNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRA 384

Query: 357 GRYGTRGLVITIVS-AESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINWTQRVQ 411
           GR+GT GL IT     E      ++    NL+       +P  L  + ++W   V+
Sbjct: 385 GRFGTLGLAITYCCRGEEENMMMTIAQRCNLNLLCLPDPIPPGLMEECLDWDVEVK 440


>gi|296489361|tpg|DAA31474.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Bos taurus]
          Length = 825

 Score =  313 bits (801), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 174/373 (46%), Positives = 235/373 (63%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 43  AHDISGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAVGFERPSPVQLKAIPLGRCGLD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM +P  +R   +   L+G+KQ  
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AEY
Sbjct: 281 KIVN--SYPLAHKIFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAEY 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  DQ  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMDQNRRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDCETYMHRIG 398

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 399 RAGRFGTLGLTVT 411


>gi|156120883|ref|NP_001095588.1| probable ATP-dependent RNA helicase DDX20 [Bos taurus]
 gi|154425896|gb|AAI51338.1| DDX20 protein [Bos taurus]
          Length = 825

 Score =  312 bits (800), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 174/373 (46%), Positives = 235/373 (63%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 43  AHDISGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAVGFERPSPVQLKAIPLGRCGLD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM +P  +R   +   L+G+KQ  
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AEY
Sbjct: 281 KIVN--SYPLAHKIFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAEY 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  DQ  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMDQNRRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDCETYMHRIG 398

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 399 RAGRFGTLGLTVT 411


>gi|156398602|ref|XP_001638277.1| predicted protein [Nematostella vectensis]
 gi|156225396|gb|EDO46214.1| predicted protein [Nematostella vectensis]
          Length = 395

 Score =  312 bits (800), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 165/371 (44%), Positives = 234/371 (63%), Gaps = 5/371 (1%)

Query: 3   HDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAI 62
           HDI +  RT DVL    + F + +L+   + +GL E GF K SPIQ+ A P    G D I
Sbjct: 4   HDISQRKRTTDVLIEEQIDF-HSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLI 62

Query: 63  VQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHV 122
            Q+KSGTGK+ VF V AL  +I       Q IIL PTREIAVQ+ DV+ ++G H   L  
Sbjct: 63  AQAKSGTGKTCVFSVIALENVIT-ESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLAC 121

Query: 123 DYFIGGTQVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFV 179
             FIGG  +E  K+ ++   I VG+PGR+K +I+ KYL  +SVR+FI+DEADKL++  F 
Sbjct: 122 KVFIGGISLEEDKKALKSCHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDESFQ 181

Query: 180 EDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI 239
           + I WI+S LP  KQM+  SATY       L+KYM +P  +R   A   L G+KQ  +L+
Sbjct: 182 QQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTFVRLNAADPSLQGIKQFYSLV 241

Query: 240 PECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQ 299
                P   + ++   L++LLS   FNQC++FSNYQ+R + + + L    + + +++G Q
Sbjct: 242 RFHPLPHKTFQEKVDGLIKLLSSVNFNQCLVFSNYQIRAKSLSDTLCRKGWPSTFIAGYQ 301

Query: 300 DQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRY 359
            Q  RL +++  K    RIL++TDL ARGIDA NV+LV+N+++PH+  TYLHR+GRAGR+
Sbjct: 302 TQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGRAGRF 361

Query: 360 GTRGLVITIVS 370
           GT G+ +T V+
Sbjct: 362 GTEGMAVTYVA 372


>gi|359321665|ref|XP_003639658.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like, partial
           [Canis lupus familiaris]
          Length = 806

 Score =  311 bits (797), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 174/373 (46%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHD+    ART DVL      FE+ +L+ +P+  GL+  GF + SP+Q+ A P    G D
Sbjct: 26  AHDVSGPRARTGDVLLAEPADFES-LLLSRPVLDGLRAAGFERPSPVQLKAIPLGRCGLD 84

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L  Q  Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 85  LIVQAKSGTGKTCVFSTIALDSLV-LENQSTQILILAPTREIAVQIHSVITAIGIKMEGL 143

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 144 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 203

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ  
Sbjct: 204 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYY 263

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L+   F AE 
Sbjct: 264 KIVN--SYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAEC 321

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 322 ISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 381

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 382 RAGRFGTLGLTVT 394


>gi|326933786|ref|XP_003212980.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like
           [Meleagris gallopavo]
          Length = 772

 Score =  311 bits (796), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 165/376 (43%), Positives = 229/376 (60%), Gaps = 10/376 (2%)

Query: 1   MAHDIQKCARTKDVLSNIDVL-----FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYV 55
           MA D   C +T ++  N+  +         +L+  P+  GL+  GF + SP+Q+ A P  
Sbjct: 1   MAEDSDICIQTTELYHNMPAISGRXXXXGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLG 60

Query: 56  LNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGA 115
             G D IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G 
Sbjct: 61  RCGLDLIVQAKSGTGKTCVFSTIALDALL-LDSSATQVLILAPTREIAVQIHAVITTIGI 119

Query: 116 HVKNLHVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
            ++ L    FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADK
Sbjct: 120 KMEGLECHVFIGGTPLSQDKVRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADK 179

Query: 173 LINTG-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLG 231
           L+  G F E I WIYS LP  KQML VSATY       L  YM +P  +R       L+G
Sbjct: 180 LLEEGSFQEQINWIYSSLPANKQMLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIG 239

Query: 232 VKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFG 291
           +KQ   ++     P   + ++ + L +L S+ PFNQ ++FSN   R + + E L +  F 
Sbjct: 240 LKQYYKIVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFP 299

Query: 292 AEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLH 351
           AE +SG+ +Q  RL ++   K+   R+L++TDL +RGIDA  V+LVINL++P D  TY+H
Sbjct: 300 AECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMH 359

Query: 352 RMGRAGRYGTRGLVIT 367
           R+GRAGR+GT GL +T
Sbjct: 360 RIGRAGRFGTLGLSVT 375


>gi|14209671|gb|AAK56847.1|AF217000_1 DEAD-box corepressor DP103 alpha [Mus musculus]
          Length = 825

 Score =  310 bits (794), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 172/373 (46%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DV+      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 44  AHDIGGPRTRTGDVVLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 102

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLI-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGL 161

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 162 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 222 SFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + E L++  F  E 
Sbjct: 282 QVVN--SYPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLHSRAQHLAEILSSKGFPTEC 339

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 340 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 399

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 400 RAGRFGTLGLTVT 412


>gi|134035905|sp|P0C218.1|DDX20_DANRE RecName: Full=Probable ATP-dependent RNA helicase DDX20; AltName:
           Full=DEAD box protein 20
          Length = 761

 Score =  310 bits (793), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 162/373 (43%), Positives = 237/373 (63%), Gaps = 9/373 (2%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AH++Q   RT DVL +  V F + +L+ KP+ +GL  +GF + SPIQ+ A P    G D 
Sbjct: 8   AHELQSRTRTDDVLISGGVEF-SSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDL 66

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           IVQ+KSGTGK+ VF   AL+ LI L     Q ++LAPTREIAVQI  VV ++G+ ++ L 
Sbjct: 67  IVQAKSGTGKTCVFTTIALDSLI-LENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLE 125

Query: 122 VDYFIGGTQVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI---- 174
              FIGG  + + K+ ++   I +GSPGRIKQ+I++  L + S+RLF++DEADKL+    
Sbjct: 126 CHVFIGGRPISQDKQHLKKCHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDS 185

Query: 175 NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ 234
           ++ F E I WIYS LP  KQML +SATY       L +YM +P  +R       LLG+KQ
Sbjct: 186 SSSFQEQINWIYSSLPANKQMLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQ 245

Query: 235 LVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
              ++P    P   + ++ + L++L S+ PFNQ ++FSN   R + + + L++    A  
Sbjct: 246 YYKIVPSHSLPHKVFEEKVQSLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVC 305

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG   Q  RL ++   K+ + R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+G
Sbjct: 306 ISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIG 365

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT G+ +T
Sbjct: 366 RAGRFGTLGVAVT 378


>gi|242021722|ref|XP_002431292.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
           corporis]
 gi|212516560|gb|EEB18554.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
           corporis]
          Length = 591

 Score =  310 bits (793), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 159/372 (42%), Positives = 244/372 (65%), Gaps = 7/372 (1%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AH + +  RT DV+ + ++ F+ D+L+     +GL+  GF K SP+Q  A P    G+D
Sbjct: 6   IAHSLNEKPRTDDVILDDEIYFK-DLLLSDLTFKGLESCGFRKPSPVQRKAIPLGRCGFD 64

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF + AL +++       Q +IL+PTREI+VQI DV+ ++G + KNL
Sbjct: 65  LIVQAKSGTGKTCVFTIVAL-EMMDSDSDNLQVLILSPTREISVQIKDVISAIGKNFKNL 123

Query: 121 HVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            V  FIGG  +   K+ +   QI VG+PGR+K +I+   + +DS+RLF++DEADKL+   
Sbjct: 124 KVSAFIGGMPLVTDKKNIKKCQIAVGAPGRVKHLIEEGSMKVDSIRLFVLDEADKLMEES 183

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F  DI++IY QLP  KQM+  SAT+       + ++M+ P+ I   D    L G++Q V+
Sbjct: 184 FRNDISFIYLQLPKEKQMIATSATFPPALNEFVTRFMISPIRISVGDVF--LKGIRQFVS 241

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
           +IP   N   +  ++  ++V++L +  F QC+IFSNYQ R E +C  L    +    +SG
Sbjct: 242 IIPHHLNLLNKIQNKVSEVVRILDKVSFKQCLIFSNYQSRAESLCTQLKQKGWETVCISG 301

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
           +Q Q +RL +++  K  + RILV+TDL +RGIDA NV+L+INL++P+D +TY+HR+GRAG
Sbjct: 302 SQSQTSRLKTIECLKEFRCRILVSTDLTSRGIDAENVNLIINLDLPYDGSTYMHRIGRAG 361

Query: 358 RYGTRGLVITIV 369
           R+GT+G+ +TIV
Sbjct: 362 RFGTQGVAVTIV 373


>gi|431896495|gb|ELK05907.1| Putative ATP-dependent RNA helicase DDX20 [Pteropus alecto]
          Length = 823

 Score =  309 bits (792), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 172/373 (46%), Positives = 234/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHD+     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 43  AHDVSGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLI-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTRYMRDPTFVRLNSSDPSLIGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE 
Sbjct: 281 KVV--SSYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAEC 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 398

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 399 RAGRFGTLGLTVT 411


>gi|391338556|ref|XP_003743624.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like
           [Metaseiulus occidentalis]
          Length = 488

 Score =  309 bits (792), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/373 (45%), Positives = 232/373 (62%), Gaps = 5/373 (1%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AH +    R++DV       FE  +L+ +    GLQ++GF   SPIQ    P    G D
Sbjct: 10  IAHSVANSDRSEDVSGGSIPTFE-AMLLSRRTLMGLQKSGFQTPSPIQAKTIPMAKCGVD 68

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I+Q+KSGTGK+ VF V AL ++I + + + Q IILAPTREIA+QI D +  +G     L
Sbjct: 69  MIIQAKSGTGKTCVFAVVAL-EMINVTLNEVQVIILAPTREIALQICDNINCIGVEYPGL 127

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGG  +E+ K   R   I VG+PGR KQ++++  L   +VRLF++DEADKL+   
Sbjct: 128 KSFAFIGGIALEQDKVKIRRCHIFVGTPGRTKQLMQVGLLKTRNVRLFVLDEADKLLEPS 187

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F EDI +IY+ LP  KQML +SAT+  + +  L KYM  P ++R       LLG++Q   
Sbjct: 188 FHEDIDFIYAALPVNKQMLALSATFPSEMVGQLSKYMRAPTMVRLNSDDPALLGIRQFYH 247

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
            +P    P + +  + K L+Q+L   P+ QC++F N QLR E++ + L  AN   E LSG
Sbjct: 248 TVPHHNIPHIVFQRKLKVLLQILVDVPYTQCLVFMNSQLRAEMLRDKLREANLPCELLSG 307

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
           AQ Q  R++SL   K+ K RILVTTDLAARGIDA  V LVIN E+P+D  TYLHR+GRAG
Sbjct: 308 AQRQSERISSLIQLKQNKCRILVTTDLAARGIDAEKVSLVINFEVPNDKETYLHRIGRAG 367

Query: 358 RYGTRGLVITIVS 370
           RYG+ G+ I++ +
Sbjct: 368 RYGSFGISISLAT 380


>gi|432866320|ref|XP_004070793.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like [Oryzias
           latipes]
          Length = 748

 Score =  309 bits (792), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 173/410 (42%), Positives = 245/410 (59%), Gaps = 9/410 (2%)

Query: 3   HDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAI 62
           HDI+   RT+DVL +  + F + +L+ +P+  GL   GF K SPIQ+ A P    G D I
Sbjct: 10  HDIETRNRTEDVLLSEGIDF-SSLLLSQPVLDGLSAAGFQKPSPIQLKAIPLGRCGLDLI 68

Query: 63  VQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHV 122
           VQ+KSGTGK+ VF   AL+ LI L     Q ++LAPTREIAVQI  VV ++G  ++ L  
Sbjct: 69  VQAKSGTGKTCVFCTIALDSLI-LENSATQVLVLAPTREIAVQIHSVVMAIGCAMEGLEC 127

Query: 123 DYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-F 178
             FIGG  V + K   +   I VGSPGRIKQ+I+L  L+  S+RLF++DEADKL+  G F
Sbjct: 128 HVFIGGRPVSQDKSHLKKCHIAVGSPGRIKQLIELGMLSTASIRLFVLDEADKLLEEGSF 187

Query: 179 VEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVAL 238
            E I WI+S LP  KQML +SATY       L +YM +P  +R       L G+KQ   L
Sbjct: 188 QEQINWIFSALPVNKQMLALSATYPESLAQHLTRYMNEPTFVRLNPKDMGLKGLKQFYKL 247

Query: 239 IPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
           +P    P   + ++ + L++L S+ PFNQ ++FSN   R + + + +++    A  +SG 
Sbjct: 248 VPSHPLPHKIFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADIVSSKGLPAVCISGG 307

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
             Q  RL ++   K+ + R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+GRAGR
Sbjct: 308 LSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGRAGR 367

Query: 359 YGTRGLVITIVS-AESLVKFHSLMGEINLD-HAFNVGLVPDNLTGDQINW 406
           +GT GL +T     E   K  ++  +  L  HA  + L P  L  +  +W
Sbjct: 368 FGTHGLAVTYCCHGEEENKMMAIAQKCGLSLHALPLVLEP-GLMDESCDW 416


>gi|410899721|ref|XP_003963345.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like [Takifugu
           rubripes]
          Length = 769

 Score =  309 bits (791), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 169/412 (41%), Positives = 247/412 (59%), Gaps = 11/412 (2%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AHDI+   RT DVL + D ++ + +L+ + +  GL  +GF K SPIQ+ A P    G D 
Sbjct: 9   AHDIEVRKRTDDVLLS-DGIYFSSLLLSQAVLDGLSSSGFQKPSPIQLKAIPLGRCGLDL 67

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQP--QTIILAPTREIAVQITDVVRSVGAHVKN 119
           IVQ+KSGTGK+ VF   AL+ L+   ++ P  Q ++LAPTREIAVQI  V  ++G  ++ 
Sbjct: 68  IVQAKSGTGKTCVFCTIALDFLV---LENPTTQVLVLAPTREIAVQIHSVFMAIGCAMEG 124

Query: 120 LHVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
           L    FIGG  V + K   +   I VGSPGRIKQ+I+L  L+  S+RLF++DEADKL+  
Sbjct: 125 LECHVFIGGRAVSQDKHHLKKCHIAVGSPGRIKQLIELGMLSTSSIRLFVLDEADKLLEE 184

Query: 177 G-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQL 235
           G F E I WI+S LP  KQML +SATY       L +YM +P  +R       L G+KQ 
Sbjct: 185 GSFQEQINWIFSSLPENKQMLALSATYPESLAQHLTRYMREPTFVRLNPTDMGLKGLKQY 244

Query: 236 VALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
             L+     P   + ++ + L++L S+ PFNQ ++FSN   R + + + L++    A  +
Sbjct: 245 YKLVQSHSLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCI 304

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
           SG   Q  RL ++   K+ + R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+GR
Sbjct: 305 SGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDLPQDWETYMHRIGR 364

Query: 356 AGRYGTRGLVITIVS-AESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINW 406
           AGR+GT+GL +T     E   K  S+  + +L+ +    ++   L  D  +W
Sbjct: 365 AGRFGTQGLAVTYCCHGEEENKLMSIAQKCSLNLSLLPAVLESRLMDDPCDW 416


>gi|449490744|ref|XP_004174308.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
           DDX20 [Taeniopygia guttata]
          Length = 754

 Score =  309 bits (791), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 163/363 (44%), Positives = 225/363 (61%), Gaps = 5/363 (1%)

Query: 9   ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSG 68
           ART+DVL          +L+  P+  GL+  GF + SP+Q+ A P    G D IVQ+KSG
Sbjct: 11  ARTRDVLLPGGPADFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCGLDLIVQAKSG 70

Query: 69  TGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG 128
           TGK+ VF   AL  ++ L     Q ++LAPTREIAVQI  V+ ++G  ++ L    FIGG
Sbjct: 71  TGKTCVFATIALEAVL-LESPATQILVLAPTREIAVQIHAVITTIGIKMEGLECHVFIGG 129

Query: 129 TQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITW 184
           T + + +   +   I VGSPGRIKQ+I+L+YL+  SVRL ++DEADKL+  G F E I W
Sbjct: 130 TPLSQDRSRLKKCHIAVGSPGRIKQLIELEYLSTASVRLLVLDEADKLLEEGSFQEQINW 189

Query: 185 IYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKN 244
           IYS LP  KQML VSATY     A L +YM +P  +R       LLG+KQ   ++     
Sbjct: 190 IYSSLPLNKQMLAVSATYPESLAAALTRYMREPTFVRLNPTDPSLLGLKQYYKIVNSHPL 249

Query: 245 PSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKAR 304
           P   + ++ + L +L S+ PFNQ ++FSN   R + + E L +  F AE +SG  +Q  R
Sbjct: 250 PHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGNMNQNQR 309

Query: 305 LASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGL 364
           L ++   K+   R+L++TDL +RGIDA  V+LVINL++P D  TYLHR+GRAGR+GT GL
Sbjct: 310 LDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPLDWETYLHRIGRAGRFGTLGL 369

Query: 365 VIT 367
            +T
Sbjct: 370 SVT 372


>gi|327271453|ref|XP_003220502.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like [Anolis
           carolinensis]
          Length = 752

 Score =  309 bits (791), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 164/363 (45%), Positives = 231/363 (63%), Gaps = 7/363 (1%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV+        + +L+  P+ +GL+  GF++ SP+Q+ A P    G D IVQ+KSGT
Sbjct: 14  RTRDVVLQEGPEDFSSLLLSPPVLEGLKAAGFLRPSPVQLKAIPLGRCGLDLIVQAKSGT 73

Query: 70  GKSIVFVVAALNKLI-KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG 128
           GK+ VF   AL+ LI + PV Q   ++LAPTREIAVQI  V+ ++G  ++ L    FIGG
Sbjct: 74  GKTCVFSTVALDSLILESPVTQ--ILVLAPTREIAVQIHAVITTIGIKMEGLECHVFIGG 131

Query: 129 TQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITW 184
           T + + K   +   I VG+PGRIKQ+I+L +LN  S+RLFI+DEADKL+  G F E I W
Sbjct: 132 TPLNQDKTRLKKCHIAVGTPGRIKQLIELDFLNTSSIRLFILDEADKLLEEGSFQEQINW 191

Query: 185 IYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKN 244
           IYS LP  KQML VSATY      TL +YM DP  +R       L+G+KQ   ++     
Sbjct: 192 IYSSLPANKQMLAVSATYPESLANTLTRYMRDPTFVRLNSTDPSLIGLKQYFKVVNSHPL 251

Query: 245 PSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKAR 304
           P   + ++ + L++L S+ PFNQ ++FSN   R + + + L +  F AE +SG  +Q  R
Sbjct: 252 PHKTFEEKAEHLLELFSKIPFNQALVFSNLHSRAQHLADLLTSKGFPAECISGNMNQNQR 311

Query: 305 LASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGL 364
           L ++   K+   RIL++TDL +RGIDA  V+LVINL++P D  TY+HR+GRAGR+GT GL
Sbjct: 312 LDAMAKLKQFHCRILISTDLTSRGIDAEKVNLVINLDVPLDWETYMHRIGRAGRFGTLGL 371

Query: 365 VIT 367
            +T
Sbjct: 372 SVT 374


>gi|47210962|emb|CAG13351.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 761

 Score =  309 bits (791), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 170/412 (41%), Positives = 244/412 (59%), Gaps = 11/412 (2%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AHDI    RT DVL +  + F + +L+ + +  GL   GF K SPIQ+ A P    G D 
Sbjct: 9   AHDIDVRTRTDDVLLSDGICF-SSLLLSQAVLDGLASAGFRKPSPIQLKAIPLGRCGLDL 67

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQP--QTIILAPTREIAVQITDVVRSVGAHVKN 119
           IVQ+KSGTGK+ VF   AL+ L+   ++ P  Q ++LAPTREIAVQI  VV ++G  ++ 
Sbjct: 68  IVQAKSGTGKTCVFCTIALDSLV---LENPATQVLVLAPTREIAVQIHSVVMAIGCAMEG 124

Query: 120 LHVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
           L    FIGG  V + K   +   I VGSPGRIKQ+I+L  L+  S+RLF++DEADKL+  
Sbjct: 125 LECHVFIGGRPVSQDKHHLKKCHIAVGSPGRIKQLIELGILSTSSIRLFVLDEADKLLEE 184

Query: 177 G-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQL 235
           G F E I WI+S LP  KQML +SATY       L +YM +P  +R       L G+KQ 
Sbjct: 185 GSFQEQINWIFSSLPENKQMLALSATYPESLAQQLTRYMREPTFVRLNPNDMGLKGLKQY 244

Query: 236 VALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
             L+     P   + ++ + L++L S+ PFNQ ++FSN   R + + + L++    A  +
Sbjct: 245 YKLVQSHSLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLSDILSSKGLPAVCI 304

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
           SG   Q  RL ++   K+ + R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+GR
Sbjct: 305 SGGLTQDQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDLPQDWETYMHRIGR 364

Query: 356 AGRYGTRGLVITIVS-AESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINW 406
           AGR+GT+GL +T     E   K  S+  + +L  +    ++   L  D  +W
Sbjct: 365 AGRFGTQGLAVTYCCHGEEENKLMSIAQKCSLSLSVLPSVIEPGLMDDPCDW 416


>gi|8547223|gb|AAF76301.1| regulator of steroidogenic factor-1 [Mus musculus]
          Length = 825

 Score =  308 bits (790), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/373 (45%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DV+      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 44  AHDIGGPRTRTGDVVLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 102

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLI-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGL 161

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 162 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 222 SFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F  E 
Sbjct: 282 QVVN--SYPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTEC 339

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 340 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 399

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 400 RAGRFGTLGLTVT 412


>gi|148540073|ref|NP_059093.3| probable ATP-dependent RNA helicase DDX20 [Mus musculus]
 gi|341940431|sp|Q9JJY4.2|DDX20_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX20; AltName:
           Full=Component of gems 3; AltName: Full=DEAD box protein
           20; AltName: Full=DEAD box protein DP 103; AltName:
           Full=Gemin-3; AltName: Full=Regulator of steroidogenic
           factor 1; Short=ROSF-1
 gi|116138313|gb|AAI25472.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Mus musculus]
 gi|148675602|gb|EDL07549.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20, isoform CRA_b [Mus
           musculus]
 gi|187950757|gb|AAI37722.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Mus musculus]
          Length = 825

 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/373 (45%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DV+      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 44  AHDIGGPRTRTGDVVLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 102

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLI-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGL 161

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 162 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 222 SFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F  E 
Sbjct: 282 QVVN--SYPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTEC 339

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 340 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 399

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 400 RAGRFGTLGLTVT 412


>gi|7414425|emb|CAB86201.1| DEAD box protein (dp103) [Mus musculus]
          Length = 825

 Score =  308 bits (789), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 171/373 (45%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DV+      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 44  AHDIGGPRTRTGDVVLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 102

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLI-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGL 161

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 162 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 222 SFQEHINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F  E 
Sbjct: 282 QVVN--SYPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTEC 339

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 340 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 399

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 400 RAGRFGTLGLTVT 412


>gi|297664086|ref|XP_002810481.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Pongo abelii]
          Length = 824

 Score =  308 bits (788), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 231/364 (63%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTRDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYRVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|395842251|ref|XP_003793932.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Otolemur
           garnettii]
          Length = 819

 Score =  308 bits (788), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 172/373 (46%), Positives = 234/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHD+     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 43  AHDVGGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ  
Sbjct: 221 SFQEQINWIYSSLPTSKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE 
Sbjct: 281 KIVN--SYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAEC 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 398

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 399 RAGRFGTLGLTVT 411


>gi|194210988|ref|XP_001498745.2| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Equus
           caballus]
          Length = 824

 Score =  307 bits (787), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 188/447 (42%), Positives = 260/447 (58%), Gaps = 22/447 (4%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHD+     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G+D
Sbjct: 43  AHDVGGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGFD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLI-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT +   K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSLDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM DP  +R   +   LLG+KQ  
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEVLANALTKYMRDPTFVRLNSSDPSLLGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE 
Sbjct: 281 KIVN--SYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRVQHLADILSSKGFPAEC 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG   Q  RL ++   K+   R+L++TDL++RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMKQNQRLDAMAKLKQFHCRVLISTDLSSRGIDAEKVNLVVNLDVPLDWETYMHRIG 398

Query: 355 RAGRYGTRGLVIT-IVSAESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTL 413
           RAGR+GT GL +T     E       +  + N++       +P  L  + ++W   V+  
Sbjct: 399 RAGRFGTLGLTVTYCCQGEEENMMMKIAQKCNINLLALPDPIPPGLMEECLDWDVEVKAA 458

Query: 414 L---------AKPL-DQAQEREDVEQT 430
           +         A+PL  Q Q+ E   QT
Sbjct: 459 MHTYGLASVPAQPLKKQIQKIERTFQT 485


>gi|426216238|ref|XP_004002372.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Ovis aries]
          Length = 825

 Score =  307 bits (787), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 172/373 (46%), Positives = 234/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT  VL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 43  AHDISGPRTRTGGVLLAEPADFES-LLLSRPVLEGLRAVGFERPSPVQLKAIPLGRCGLD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM +P  +R   +   L+G+KQ  
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AEY
Sbjct: 281 KIVN--SYPLAHKIFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAEY 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 398

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 399 RAGRFGTLGLTVT 411


>gi|301784208|ref|XP_002927519.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like
           [Ailuropoda melanoleuca]
 gi|281339607|gb|EFB15191.1| hypothetical protein PANDA_017303 [Ailuropoda melanoleuca]
          Length = 823

 Score =  307 bits (786), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 172/373 (46%), Positives = 234/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHD+     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 43  AHDVSGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ  
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE 
Sbjct: 281 KIVN--SYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAEC 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 398

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 399 RAGRFGTLGLAVT 411


>gi|426330806|ref|XP_004026397.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Gorilla
           gorilla gorilla]
          Length = 824

 Score =  306 bits (785), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 172/364 (47%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLI-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL+IP D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDIPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|332237647|ref|XP_003268017.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Nomascus
           leucogenys]
          Length = 824

 Score =  306 bits (785), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 230/364 (63%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|50760381|ref|XP_417996.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Gallus
           gallus]
          Length = 767

 Score =  306 bits (785), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 164/362 (45%), Positives = 224/362 (61%), Gaps = 5/362 (1%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DVL          +L+  P+  GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 10  RTRDVLLPGGPSDFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCGLDLIVQAKSGT 69

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 70  GKTCVFSTIALDALL-LDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGT 128

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 129 PLSQDKVRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWI 188

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L  YM +P  +R       L+G+KQ   ++     P
Sbjct: 189 YSSLPANKQMLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLP 248

Query: 246 SLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              + ++ + L +L S+ PFNQ ++FSN   R + + E L +  F AE +SG+ +Q  RL
Sbjct: 249 HKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRL 308

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
            ++   K+   R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+GRAGR+GT GL 
Sbjct: 309 DAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLS 368

Query: 366 IT 367
           +T
Sbjct: 369 VT 370


>gi|410968034|ref|XP_003990518.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
           DDX20, partial [Felis catus]
          Length = 783

 Score =  306 bits (785), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 172/373 (46%), Positives = 234/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHD+     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 3   AHDVSGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 61

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 62  LIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 120

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 121 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 180

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   LLG+KQ  
Sbjct: 181 SFQEQINWIYSSLPASKQMLAVSATYPEYLANALTRYMRDPTFVRLNSSDPSLLGLKQYY 240

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE 
Sbjct: 241 RVVN--SYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAEC 298

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 299 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 358

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 359 RAGRFGTLGLTVT 371


>gi|300794891|ref|NP_001178640.1| probable ATP-dependent RNA helicase DDX20 [Rattus norvegicus]
          Length = 824

 Score =  306 bits (784), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 171/373 (45%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DV+      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 43  AHDIGGPRTRTGDVVLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLI-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEILANALTRYMRDPTFVRLNPSDPSLIGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F  E 
Sbjct: 281 QVV--NSYPLAHKIFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPTEC 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 398

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 399 RAGRFGTLGLTVT 411


>gi|296208839|ref|XP_002751271.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Callithrix
           jacchus]
          Length = 822

 Score =  306 bits (784), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 230/364 (63%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNASDPSLIGLKQYYKVVN--SYP 287

Query: 246 SLRYVDEEK--KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKIQYLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|348586591|ref|XP_003479052.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like [Cavia
           porcellus]
          Length = 820

 Score =  306 bits (783), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 172/373 (46%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDI-QKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DVL      FE+ +L+ +P+ +GLQ  GF + SP+Q+ A P    G+D
Sbjct: 43  AHDIGSPRTRTGDVLLAEPADFES-LLLSRPVLEGLQAAGFERPSPVQLKAIPLGRCGFD 101

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 102 LIVQAKSGTGKTCVFSTIALDSLV-LENSSTQILILAPTREIAVQIHSVITAIGIKMEGL 160

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 161 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 220

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM +P  +R   +   L+G+KQ  
Sbjct: 221 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYY 280

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+  FNQ ++FSN   R + + + L++  F AE 
Sbjct: 281 KVVN--SYPLAYKIFEEKAQHLQELFSKILFNQALVFSNLHSRAQHLADILSSKGFPAEC 338

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL  +   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 339 ISGNMNQSQRLDVMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 398

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 399 RAGRFGTLGLTVT 411


>gi|21411366|gb|AAH31062.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapiens]
          Length = 824

 Score =  305 bits (782), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|23270929|gb|AAH34953.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapiens]
          Length = 824

 Score =  305 bits (782), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|410213832|gb|JAA04135.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Pan troglodytes]
 gi|410259046|gb|JAA17489.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Pan troglodytes]
 gi|410289380|gb|JAA23290.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Pan troglodytes]
 gi|410349357|gb|JAA41282.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Pan troglodytes]
          Length = 824

 Score =  305 bits (782), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|15079431|gb|AAH11556.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapiens]
 gi|119576912|gb|EAW56508.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20, isoform CRA_b [Homo
           sapiens]
 gi|123982868|gb|ABM83175.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [synthetic construct]
 gi|123997547|gb|ABM86375.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [synthetic construct]
          Length = 824

 Score =  305 bits (782), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|397478821|ref|XP_003810735.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Pan paniscus]
          Length = 824

 Score =  305 bits (782), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|7022802|dbj|BAA91727.1| unnamed protein product [Homo sapiens]
          Length = 824

 Score =  305 bits (781), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQCYKVVN--SYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|403284287|ref|XP_003933509.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Saimiri
           boliviensis boliviensis]
          Length = 824

 Score =  305 bits (781), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+  GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLDGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNASDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|449665538|ref|XP_002154660.2| PREDICTED: uncharacterized protein LOC100198812 [Hydra
           magnipapillata]
          Length = 1139

 Score =  305 bits (781), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 165/395 (41%), Positives = 238/395 (60%), Gaps = 10/395 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DV  + D+ FE+ +L+   +  GL+  GF + SPIQ+ + P    G D + Q+KSGT
Sbjct: 7   RTVDVAIDDDIGFES-LLLSPDVLLGLKAVGFDRPSPIQLQSIPLAKCGADLVCQAKSGT 65

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF V AL   I L + + Q ++LAPTREIA QI DV+  +G  +K+L    FIGG 
Sbjct: 66  GKTCVFAVTALES-INLSLSKLQVLVLAPTREIAHQIHDVIMKIGQKMKSLKCSLFIGGM 124

Query: 130 QVER---PKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
            ++      +   I +G+PGRIK +I+   +   S+RLF++DEADKL+  GF E I WIY
Sbjct: 125 PIQHDVDSIKSCHIAIGTPGRIKSLIESNIMLTKSIRLFVLDEADKLLEEGFQEQINWIY 184

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPS 246
           S LP  KQ+L +SATY       L  YM +P+ +R       L GV+Q+   +     P+
Sbjct: 185 STLPKQKQVLALSATYPQHLADYLSIYMNEPIHVRINTDDLNLKGVRQMFTTVKHHALPN 244

Query: 247 LRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLA 306
           L Y ++ + L+  +   PF+QC++FSNYQ R   +C  L    +   +++G+Q Q  RL 
Sbjct: 245 LLYNEKCEALLNCIENVPFHQCMVFSNYQSRASHLCTLLNKKGWPCTFIAGSQLQPTRLK 304

Query: 307 SLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVI 366
           ++   K    RILVTTDL+ARGID   V+LV+NL++P D  TYLHR+GRAGR+GT GL I
Sbjct: 305 AISELKSYSCRILVTTDLSARGIDCDKVNLVVNLDMPWDTETYLHRVGRAGRFGTYGLAI 364

Query: 367 TIVS-AESLVKFHSLMGEINLDHAFNVGLVPDNLT 400
           +IVS A+ + K   +   IN D    +  +PD+L+
Sbjct: 365 SIVSGADEIKKLIEVSENINCD----IVQLPDDLS 395


>gi|256223453|ref|NP_009135.4| probable ATP-dependent RNA helicase DDX20 [Homo sapiens]
 gi|12643886|sp|Q9UHI6.2|DDX20_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX20; AltName:
           Full=Component of gems 3; AltName: Full=DEAD box protein
           20; AltName: Full=DEAD box protein DP 103; AltName:
           Full=Gemin-3
          Length = 824

 Score =  305 bits (780), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|194036459|ref|XP_001928579.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Sus scrofa]
          Length = 832

 Score =  305 bits (780), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 170/373 (45%), Positives = 233/373 (62%), Gaps = 11/373 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHD+     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 50  AHDVGGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 108

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 109 LIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGVKMEGL 167

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 168 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 227

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM +P  +R   +   L+G+KQ  
Sbjct: 228 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYY 287

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F A  
Sbjct: 288 KVVN--SYPLAHKIFEEKAQHLQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAVC 345

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 346 ISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIG 405

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT GL +T
Sbjct: 406 RAGRFGTLGLTVT 418


>gi|5359631|gb|AAD42744.1|AF106019_1 DEAD-box protein [Homo sapiens]
          Length = 824

 Score =  305 bits (780), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|6503002|gb|AAF14544.1|AF171063_1 DEAD box RNA helicase Gemin3 [Homo sapiens]
          Length = 824

 Score =  305 bits (780), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 170/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|291398265|ref|XP_002715818.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Oryctolagus
           cuniculus]
          Length = 826

 Score =  305 bits (780), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 182/424 (42%), Positives = 253/424 (59%), Gaps = 18/424 (4%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 45  AHDIGGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 103

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 104 LIVQAKSGTGKTCVFSTIALDSLI-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 162

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 163 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 222

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ  
Sbjct: 223 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYY 282

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE 
Sbjct: 283 KVV--NSYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAEC 340

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG  +Q  RL ++   K+    +L++TDL +RGIDA  V+LV+NL++P D  TY+HR+G
Sbjct: 341 ISGNMNQNQRLDAMAKLKQFHCSLLISTDLTSRGIDAEKVNLVVNLDVPVDWETYMHRIG 400

Query: 355 RAGRYGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPD----NLTGDQINWTQRV 410
           RAGR+GT GL +T        +  ++M +I      N+ L+PD     L  + ++W   V
Sbjct: 401 RAGRFGTLGLTVTYCCRG---EEENMMMKIAQKCNINLLLLPDPIPSGLMEECLDWDVEV 457

Query: 411 QTLL 414
           +  +
Sbjct: 458 KAAI 461


>gi|60099243|emb|CAH65452.1| hypothetical protein RCJMB04_38k15 [Gallus gallus]
          Length = 676

 Score =  304 bits (778), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 164/362 (45%), Positives = 224/362 (61%), Gaps = 5/362 (1%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DVL          +L+  P+  GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 10  RTRDVLLPGGPSDFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCGLDLIVQAKSGT 69

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 70  GKTCVFSTIALDALL-LDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGT 128

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 129 PLSQDKVRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWI 188

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L  YM +P  +R       L+G+KQ   ++     P
Sbjct: 189 YSSLPANKQMLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLP 248

Query: 246 SLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              + ++ + L +L S+ PFNQ ++FSN   R + + E L +  F AE +SG+ +Q  RL
Sbjct: 249 HKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRL 308

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
            ++   K+   R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+GRAGR+GT GL 
Sbjct: 309 DAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLS 368

Query: 366 IT 367
           +T
Sbjct: 369 VT 370


>gi|402855674|ref|XP_003892441.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Papio anubis]
          Length = 825

 Score =  304 bits (778), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 169/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ + + +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRSVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|355745538|gb|EHH50163.1| hypothetical protein EGM_00945 [Macaca fascicularis]
          Length = 825

 Score =  303 bits (777), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 169/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ + + +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRSVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVN--SYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|383415507|gb|AFH30967.1| putative ATP-dependent RNA helicase DDX20 [Macaca mulatta]
          Length = 825

 Score =  303 bits (776), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 169/364 (46%), Positives = 229/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ + + +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRSVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|181339927|ref|NP_001116795.1| probable ATP-dependent RNA helicase DDX20 [Danio rerio]
          Length = 788

 Score =  303 bits (776), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 161/373 (43%), Positives = 236/373 (63%), Gaps = 10/373 (2%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AH++Q   RT DVL +  V F + +L+ KP+ +GL  +GF + SPIQ+ A P    G D 
Sbjct: 36  AHELQSRTRTDDVLISGGVEF-SSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDL 94

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           IVQ+KSGTGK+ VF   AL+ LI L     Q ++LAPTREIAVQI  VV ++G+ ++ L 
Sbjct: 95  IVQAKSGTGKTCVFTTIALDSLI-LENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLE 153

Query: 122 VDYFIGGTQVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI---- 174
              FIGG  + + K+ ++   I +GSPGRIKQ+I++  L + S+RLF++DEADKL+    
Sbjct: 154 CHVFIGGRPISQDKQHLKKCHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDS 213

Query: 175 NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ 234
           ++ F E I WIYS LP  KQML +SATY       L +YM +P  +R       LLG+KQ
Sbjct: 214 SSSFQEQINWIYSSLPANKQMLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQ 273

Query: 235 LVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
              ++P    P   + ++ + L++L S+ PFNQ ++FSN     + + + L++    A  
Sbjct: 274 YYKIVPSHSLPHKVFEEKVQSLLELFSKIPFNQALVFSNLH-TAQHLADILSSKGLPAVC 332

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG   Q  RL ++   K+ + R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+G
Sbjct: 333 ISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIG 392

Query: 355 RAGRYGTRGLVIT 367
           RAGR+GT G+ +T
Sbjct: 393 RAGRFGTLGVAVT 405


>gi|328723280|ref|XP_001943847.2| PREDICTED: hypothetical protein LOC100161038 [Acyrthosiphon pisum]
          Length = 889

 Score =  303 bits (775), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 162/404 (40%), Positives = 246/404 (60%), Gaps = 17/404 (4%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DV ++    F+  +     I +GL + GF   SPIQ+AA P ++ G+D IV++K+GT
Sbjct: 12  RTTDVQTHDQTPFDAIITGHPLILKGLSDCGFTNASPIQVAALPTIIAGHDTIVEAKNGT 71

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK++ FV+  L +L KL     QTIILAPTREIAVQI    + VG H+  L  +YFIGGT
Sbjct: 72  GKTLTFVIPTLMRL-KLEQVHLQTIILAPTREIAVQIQQCFKKVGQHLPELKCEYFIGGT 130

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI-NTGFVEDITWI 185
            V+  K   +  QI VGSPGRIK +I    L    V+ FI+DE D+L+ +  F +D+  I
Sbjct: 131 PVDVDKEKAKCCQIAVGSPGRIKHLINEHVLKCSEVKSFILDEVDRLVTDKSFTKDVRLI 190

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR--------PEDATRPLLGVKQLVA 237
            ++LP +KQ +VVSA+   ++++   ++M + ++++         +D ++ LLG+KQ VA
Sbjct: 191 DAKLPKLKQTIVVSASIDKNDMSVFDEFMTEYIVVKGAEEDMNALQDPSKFLLGIKQYVA 250

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
            +       +    +  +L+ +L    + QC+IF+NY  R E +C  L + N+ A+Y+ G
Sbjct: 251 CVKAVSTNIILLPAKNVRLLNILQNLQYTQCIIFTNYMTRVEAVCNMLRDHNYKADYIRG 310

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
            QDQ  RL  +D     K +ILV TDL ARGID++NVDLVIN++ P+D ATYLHR+GRAG
Sbjct: 311 DQDQSIRLELVDRLTSFKSKILVATDLIARGIDSSNVDLVINMDCPNDWATYLHRIGRAG 370

Query: 358 RYGTRGLVITIVSAESLVK-FHSLMGEINLDHAFNVGLVPDNLT 400
           R+G +G   TI+  +  +K F +++  I    +  V ++P  +T
Sbjct: 371 RFGNKGNAFTILDDDKELKTFKNIINSI---ESIKVKMLPIAIT 411


>gi|348521654|ref|XP_003448341.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like
           [Oreochromis niloticus]
          Length = 723

 Score =  302 bits (774), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 162/372 (43%), Positives = 232/372 (62%), Gaps = 10/372 (2%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AHDI+   RT+DV+ +  + F   +L+ +P+  GL   GF K SPIQ+ A P    G D 
Sbjct: 9   AHDIEARKRTEDVILSEGIDF-GSLLLSQPVLDGLSAAGFQKPSPIQLKAIPLGRCGLDL 67

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQP--QTIILAPTREIAVQITDVVRSVGAHVKN 119
           IVQ+KSGTGK+ VF   AL+ L+   ++ P  Q ++LAPTREIAVQI  VV ++G  ++ 
Sbjct: 68  IVQAKSGTGKTCVFCTIALDSLV---LENPSTQVLVLAPTREIAVQIHSVVMAIGCAMEG 124

Query: 120 LHVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
           L    FIGG  V + K   +   + VGSPGRIKQ+I+L  L+  S+RLF++DEADKL+  
Sbjct: 125 LECHVFIGGRPVSQDKTHLKKCHVAVGSPGRIKQLIELGMLSTASIRLFVLDEADKLLEE 184

Query: 177 G-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQL 235
           G F E I WI+S LP  KQML +SATY       L +YM +P  +R   +   L G+KQ 
Sbjct: 185 GSFQEQINWIFSSLPVNKQMLALSATYPESLAQHLTRYMREPTFVRLNPSDMGLKGLKQY 244

Query: 236 VALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
             L+     P   + ++ + L++L S+ PFNQ ++FSN   R + + + L++    A  +
Sbjct: 245 YKLVQSHPLPHKVFEEKVQYLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCI 304

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
           SG   Q  RL ++   K  + R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+GR
Sbjct: 305 SGGLSQDQRLEAMSKLKHYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGR 364

Query: 356 AGRYGTRGLVIT 367
           AGR+GT+GL +T
Sbjct: 365 AGRFGTQGLAVT 376


>gi|301606464|ref|XP_002932842.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like [Xenopus
           (Silurana) tropicalis]
          Length = 773

 Score =  302 bits (774), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 177/422 (41%), Positives = 239/422 (56%), Gaps = 7/422 (1%)

Query: 2   AHDIQKCARTKDVLSNI-DVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AH +    RT+DV     D      +L+ +P+  GL+  GF K SPIQ  A P    G D
Sbjct: 3   AHMLGSRPRTEDVSQGTGDTTDFKSLLLSRPVLDGLEAAGFNKPSPIQSKAIPLGRCGLD 62

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q ++LAPTREIAVQI  V+ S+G  ++ L
Sbjct: 63  LIVQAKSGTGKTCVFSTVALDSLI-LENTATQVLVLAPTREIAVQIHSVMLSIGCRMEGL 121

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I++ YLN  SVRLFI+DEADKL+  G
Sbjct: 122 ESHVFIGGTPLPQDKIRLKKCHIAVGSPGRIKQLIEIGYLNTSSVRLFILDEADKLLEEG 181

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM +P  +R       LLG+KQ  
Sbjct: 182 SFQEQINWIYSSLPANKQMLAVSATYPESLAKALTRYMREPTFVRLNVTDPSLLGLKQFY 241

Query: 237 ALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
            ++     P   + ++   L +L ++  FNQ ++FSN   R + +   L    F A  +S
Sbjct: 242 KVVKSHPLPHKVFDEKVMHLQELFNRISFNQALVFSNLHSRAQHLANILTAKGFPAVCIS 301

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G+ +Q  RL ++   K+   R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+GRA
Sbjct: 302 GSMNQNQRLDAVAKLKQFHCRVLISTDLTSRGIDAERVNLVINLDVPEDWETYMHRIGRA 361

Query: 357 GRYGTRGLVITIVS-AESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLA 415
           GR+GT GL +T     E       +  + NL        +PD L  +  NW   V T+  
Sbjct: 362 GRFGTHGLSVTFCCHGEEENMMMGIAMKCNLKLLPLPDPIPDGLMEETCNWDIEVTTVKT 421

Query: 416 KP 417
            P
Sbjct: 422 IP 423


>gi|440897445|gb|ELR49127.1| Putative ATP-dependent RNA helicase DDX20, partial [Bos grunniens
           mutus]
          Length = 840

 Score =  301 bits (772), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 173/387 (44%), Positives = 236/387 (60%), Gaps = 25/387 (6%)

Query: 2   AHDIQ-KCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 44  AHDISGPRTRTGDVLLAEPADFES-LLLSRPVLEGLRAVGFERPSPVQLKAIPLGRCGLD 102

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGL 161

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 162 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L KYM +P  +R   +   L+G+KQ  
Sbjct: 222 SFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYY 281

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AEY
Sbjct: 282 KIVN--SYPLAHKIFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAEY 339

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLA--------------ARGIDAANVDLVINL 340
           +SG  +Q  RL ++   K+   R+L++TDL+              +RGIDA  V+LV+NL
Sbjct: 340 ISGNMNQNRRLDAMAKLKQFHCRVLISTDLSLLQTSTCSFLEFKTSRGIDAEKVNLVVNL 399

Query: 341 EIPHDAATYLHRMGRAGRYGTRGLVIT 367
           ++P D  TY+HR+GRAGR+GT GL +T
Sbjct: 400 DVPLDCETYMHRIGRAGRFGTLGLTVT 426


>gi|355558277|gb|EHH15057.1| hypothetical protein EGK_01094, partial [Macaca mulatta]
          Length = 825

 Score =  301 bits (772), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 168/364 (46%), Positives = 228/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           R  DVL      FE+ +L+ + + +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RMGDVLLAEPADFES-LLLSRSVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE +SG  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT G
Sbjct: 348 RLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|14209614|gb|AAK56799.1|AF155803_1 DEAD-box corepressor DP103 [Homo sapiens]
          Length = 824

 Score =  301 bits (770), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 169/364 (46%), Positives = 227/364 (62%), Gaps = 10/364 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DVL      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D IVQ+KSGT
Sbjct: 52  RTGDVLLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT
Sbjct: 111 GKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGT 169

Query: 130 QVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWI 185
            + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WI
Sbjct: 170 PLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWI 229

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           YS LP  KQML VSATY       L KYM DP  +R   +   L+G+KQ   ++     P
Sbjct: 230 YSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVV--NSYP 287

Query: 246 SLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F AE + G  +Q  
Sbjct: 288 LAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECILGNMNQNQ 347

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GRAGR GT G
Sbjct: 348 RLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRLGTLG 407

Query: 364 LVIT 367
           L +T
Sbjct: 408 LTVT 411


>gi|344275315|ref|XP_003409458.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
           DDX20-like [Loxodonta africana]
          Length = 808

 Score =  293 bits (750), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 159/344 (46%), Positives = 215/344 (62%), Gaps = 9/344 (2%)

Query: 30  KPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQ 89
           +P    L+   F + SP+ + A P    G D IVQ+KSGTGK+ VF   AL+ L+ L   
Sbjct: 57  RPAWWALRAPXFERPSPVSLKALPAGRCGLDLIVQAKSGTGKTCVFSTIALDSLV-LENL 115

Query: 90  QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK---RPVQIVVGSPG 146
             Q +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT + + K   +   I VGSPG
Sbjct: 116 STQILILAPTREIAVQIHSVIMAIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPG 175

Query: 147 RIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWIYSQLPPMKQMLVVSATYSHD 205
           RIKQ+I+L+YL+  SVRLFI+DEADKL+  G F E I WIYS LP  KQML VSATY   
Sbjct: 176 RIKQLIELEYLHPASVRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEF 235

Query: 206 NLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK--LVQLLSQT 263
               L KYM DP  +R   +   L+G+KQ   L+     P    + EEK   L +L S+ 
Sbjct: 236 LANALTKYMRDPTFVRLNSSDPSLIGLKQYYKLV--TSYPLAHKIFEEKAQHLQELFSRI 293

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
           PFNQ ++FSN   R + + + L++  F AE +SG  +Q  RL ++   K+   R+L++TD
Sbjct: 294 PFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHCRVLISTD 353

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVIT 367
           L +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT GL +T
Sbjct: 354 LTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVT 397


>gi|330844486|ref|XP_003294155.1| hypothetical protein DICPUDRAFT_43010 [Dictyostelium purpureum]
 gi|325075435|gb|EGC29323.1| hypothetical protein DICPUDRAFT_43010 [Dictyostelium purpureum]
          Length = 392

 Score =  289 bits (740), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 149/370 (40%), Positives = 234/370 (63%), Gaps = 11/370 (2%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT D+  N ++ F +++L+ K I +GL++ G++K SPIQ+ A P  ++G D I Q+KSGT
Sbjct: 24  RTNDIEINENITF-SELLLNKDILRGLEDAGYIKPSPIQLKAIPLGISGIDMIAQAKSGT 82

Query: 70  GKSIVFVVAALN--KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG 127
           GK++VF V AL+  +++    ++P  +I+APTREIAVQI DVV+ +  + K +    FIG
Sbjct: 83  GKTVVFGVIALDYCEMVGGVPRKPLVLIMAPTREIAVQIGDVVKQISKYCKRIKTQVFIG 142

Query: 128 GTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITW 184
           G + +     +   QI+VG+PGRIK +I+   L  D++++ I+DEADKL++  F + I W
Sbjct: 143 GLKEDNDIHRLAGSQIIVGTPGRIKSLIENLQLRTDTLKMLILDEADKLLDASFTKIINW 202

Query: 185 IYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI--PEC 242
           IY+ +P  +Q+L  SATY    +  LQ YM  P+ IR    T  L G+KQ   +   P  
Sbjct: 203 IYTTMPANRQILAFSATYPSYLINILQAYMKSPIQIRLCSDTPSLEGIKQYYQVFKNPNS 262

Query: 243 KNPSLRY---VDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQ 299
            NP   Y    ++ K L+ +L Q  F Q +IF N+++R E +   L   ++   +++G Q
Sbjct: 263 TNPGTNYKLFQEKIKSLLLILEQVSFYQAIIFINHKIRAEELARILNRESWPTSFIAGGQ 322

Query: 300 DQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRY 359
           DQ+ RL ++++ K+  +RILV+TDL +RGID   V+LVIN+++P D  TY HR+GR GR+
Sbjct: 323 DQRERLQTMNALKQFNIRILVSTDLISRGIDVERVNLVINMDLPKDHETYFHRIGRTGRF 382

Query: 360 GTRGLVITIV 369
           GT G+ +T +
Sbjct: 383 GTFGISVTFI 392


>gi|449280952|gb|EMC88167.1| putative ATP-dependent RNA helicase DDX20, partial [Columba livia]
          Length = 705

 Score =  286 bits (732), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 147/312 (47%), Positives = 199/312 (63%), Gaps = 5/312 (1%)

Query: 60  DAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKN 119
           D IVQ+KSGTGK+ VF   AL+ ++ L     Q +ILAPTREIAVQI  V+ ++G  ++ 
Sbjct: 1   DLIVQAKSGTGKTCVFSTIALDAVL-LECPATQILILAPTREIAVQIHAVITTIGIKMEG 59

Query: 120 LHVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
           L    FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  
Sbjct: 60  LECHVFIGGTPLNQDKIRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEE 119

Query: 177 G-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQL 235
           G F E I WIYS LP  KQML VSATY       L +YM DP  +R       L+G+KQ 
Sbjct: 120 GSFQEQINWIYSSLPANKQMLAVSATYPESLANALTRYMRDPTFVRLNPTDPSLIGLKQY 179

Query: 236 VALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
             ++     P   + ++ + L  L S+ PFNQ ++FSN   R + + E L +  F AE +
Sbjct: 180 YKIVTSHPLPHKTFEEKTQHLQDLFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECI 239

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
           SG+ +Q  RL ++   K+   R+L++TDL +RGIDA  V+LVINL++P D  TY+HR+GR
Sbjct: 240 SGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGR 299

Query: 356 AGRYGTRGLVIT 367
           AGR+GT GL +T
Sbjct: 300 AGRFGTLGLAVT 311


>gi|321478456|gb|EFX89413.1| hypothetical protein DAPPUDRAFT_190766 [Daphnia pulex]
          Length = 554

 Score =  283 bits (723), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 155/370 (41%), Positives = 227/370 (61%), Gaps = 5/370 (1%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AH      RT+DV +  ++ F +D+ I + + +GL +NG++K SPIQ+ A P    G D 
Sbjct: 14  AHSFDSKQRTEDVKTQEELTF-SDMHISRQVLEGLNKNGYLKPSPIQLEAIPIGKCGIDM 72

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           ++QSKSGTGK++VF +  L   I L +   Q +ILAPTREIA Q   V+ ++G+ +  L+
Sbjct: 73  VIQSKSGTGKTLVFGIVMLES-IDLEISTVQGLILAPTREIAFQNAHVIYTIGSELPGLN 131

Query: 122 VDYFIGGTQVE---RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF 178
           V  FIGG  V+      +   I VG+PGR+KQ+I+   L   ++RLFI+DEADKL+   F
Sbjct: 132 VQVFIGGLPVDTDLSKCKSCHIAVGTPGRVKQLIEKNALKTKTIRLFILDEADKLMEDSF 191

Query: 179 VEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVAL 238
            +D+ WI+SQ+   KQ+L VSATY       + +YM  P  +R       LLGVKQ V  
Sbjct: 192 ADDVMWIFSQMQLTKQVLAVSATYPEVLANLVSRYMQKPSFVRLGHHQPTLLGVKQFVFR 251

Query: 239 IPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
           +        +  ++ + L+++L    F QC+IF+N Q R E +   L++    A  +SG+
Sbjct: 252 VAYHPMAQQQAKNKFEILLKMLKVIEFGQCMIFTNLQTRAESLAAQLSSNGHAALSISGS 311

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
           Q Q  RL +L   ++ + +ILV TDLAARGIDA ++DLVI++++P DAATYLHR+GRAGR
Sbjct: 312 QTQTKRLQTLLKLRQYQCKILVATDLAARGIDAEHIDLVIHMDVPRDAATYLHRVGRAGR 371

Query: 359 YGTRGLVITI 368
           +G   L  TI
Sbjct: 372 FGAAALTCTI 381


>gi|149634448|ref|XP_001507983.1| PREDICTED: probable ATP-dependent RNA helicase DDX20
           [Ornithorhynchus anatinus]
          Length = 729

 Score =  281 bits (720), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/365 (42%), Positives = 219/365 (60%), Gaps = 10/365 (2%)

Query: 55  VLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP--QTIILAPTREIAVQITDVVRS 112
           V+   + IVQ+KSGTGK+ VF   AL+ LI   ++ P  Q ++LAPTREIAVQI  V+ +
Sbjct: 3   VILVSNLIVQAKSGTGKTCVFSTVALDSLI---LENPSTQILVLAPTREIAVQIHSVITA 59

Query: 113 VGAHVKNLHVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDE 169
           +G  ++ L    FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DE
Sbjct: 60  IGIKMEGLECHVFIGGTPLSQDKSRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDE 119

Query: 170 ADKLINTG-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRP 228
           ADKL+  G F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   
Sbjct: 120 ADKLLEEGSFQEQINWIYSSLPANKQMLAVSATYPEFLANALTRYMRDPTFVRLNSSDPS 179

Query: 229 LLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANA 288
           L+G+KQ   ++     P   + ++ + L +L SQ PFNQ ++FSN   R + + + L + 
Sbjct: 180 LIGLKQYYKVVNSHPLPHKTFEEKTEHLQELFSQIPFNQALVFSNLHSRAQHLADILTSK 239

Query: 289 NFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAAT 348
            F AE +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  T
Sbjct: 240 GFPAECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPVDWET 299

Query: 349 YLHRMGRAGRYGTRGLVITIVS-AESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINWT 407
           Y+HR+GRAGR+GT GL +T     E      ++  + NL+       +P  L  + + W 
Sbjct: 300 YMHRIGRAGRFGTLGLAVTYCCRGEEENVMMTIAQKCNLNLFCLPDPIPAGLMEECLEWD 359

Query: 408 QRVQT 412
             V+ 
Sbjct: 360 VEVKA 364


>gi|432103968|gb|ELK30801.1| Putative ATP-dependent RNA helicase DDX20, partial [Myotis davidii]
          Length = 721

 Score =  277 bits (709), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 200/314 (63%), Gaps = 9/314 (2%)

Query: 60  DAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKN 119
           D IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ 
Sbjct: 1   DLIVQAKSGTGKTCVFSTIALDSLV-LENLSTQILILAPTREIAVQIHSVITAIGIKMEG 59

Query: 120 LHVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
           L    FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  SVRLFI+DEADKL+  
Sbjct: 60  LECHVFIGGTPLPQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSVRLFILDEADKLLEE 119

Query: 177 G-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQL 235
           G F E I WIYS LP  KQM+ VSATY       L KYM DP  +R   +   LLG+KQ 
Sbjct: 120 GSFQEQINWIYSSLPASKQMVAVSATYPEFLANALAKYMRDPTFVRLNSSDPSLLGLKQY 179

Query: 236 VALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAE 293
             ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L +  F AE
Sbjct: 180 YRVVN--LYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILTSKGFPAE 237

Query: 294 YLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRM 353
            +SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+
Sbjct: 238 CISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRI 297

Query: 354 GRAGRYGTRGLVIT 367
           GRAGR+GT GL +T
Sbjct: 298 GRAGRFGTLGLAVT 311


>gi|157107935|ref|XP_001650004.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
 gi|108879443|gb|EAT43668.1| AAEL004911-PA [Aedes aegypti]
          Length = 1061

 Score =  275 bits (704), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 142/386 (36%), Positives = 230/386 (59%), Gaps = 7/386 (1%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT DV  ++ + F + + + +P+ +GL  N F   SPIQ  A P    G D +VQ+KSGT
Sbjct: 12  RTADVEFDLSLQF-SKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGT 70

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK++VF V  + +     V  PQ++ + PTREIAVQI DV+  +G  V N     FIGG 
Sbjct: 71  GKTLVFTVL-ITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGL 129

Query: 130 QVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
            + + ++ +Q    VVG+PGRI  +IK   LN   +++ ++DEAD LI      ++  I 
Sbjct: 130 DISQDRKNLQSCSAVVGTPGRINHLIKSNVLNTSQIKILVLDEADSLITGSLKPEVDQIV 189

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDPLL-IRPEDATRPLLGVKQLVALIPECKNP 245
             LP  +Q +V SATY ++    L KY+ D  + + P+     L G++Q V  +PE K+ 
Sbjct: 190 KMLPTKRQTVVCSATYYNNRDRELLKYLNDKFIGVTPKKEVPVLHGIRQFVQELPEAKDN 249

Query: 246 SLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
               + +  +L ++L + P+ QC++F+N Q + +  C  L  A +  E + G Q+Q+ RL
Sbjct: 250 IKEMMAKIAELNRILKKVPYGQCLVFANTQTKADTYCSYLGRAGWPTEVIRGGQEQRVRL 309

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
            ++++ K  + R+L  TD+ +RGIDA NV+LVIN+++P D + YLHR+GRAGR+GT+ + 
Sbjct: 310 KTVENLKEFRCRVLTATDVISRGIDAENVNLVINVDVPRDNSVYLHRIGRAGRFGTQAIA 369

Query: 366 ITIV-SAESLVKFHSLMGEINLDHAF 390
           IT+V S++ + +F  ++ +I  +  F
Sbjct: 370 ITLVSSSKEMDRFRKILQDIGGNDMF 395


>gi|357619271|gb|EHJ71915.1| hypothetical protein KGM_06035 [Danaus plexippus]
          Length = 700

 Score =  273 bits (698), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 147/350 (42%), Positives = 226/350 (64%), Gaps = 8/350 (2%)

Query: 26  VLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK 85
           +L+     +GL+++GF+K SPIQ+   P    G+D ++++KSGTGK+ VF V AL K I 
Sbjct: 1   MLLSSNTLKGLKDSGFLKPSPIQLHGIPLGKCGFDLLLEAKSGTGKTAVFTVIALEK-ID 59

Query: 86  LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRP-VQI 140
           L  +  Q +ILAPTREIA QI DV+R +G H   L ++  +GG  V    E+ K   V +
Sbjct: 60  LK-KGLQVVILAPTREIASQICDVLRQIGCHYNGLRIEVVMGGLPVQDDIEKFKNNNVHV 118

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVGSPGR++ +I+ K++++  VRL ++DEADKL+   F+ DI +I+  LP  KQ+++ SA
Sbjct: 119 VVGSPGRLRHLIQNKHIDILGVRLLVLDEADKLMEKSFLPDIKYIHMVLPKQKQVILSSA 178

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           TY  +    + +++ DP  + P +    LLGV Q +  +    N   +     ++L+++L
Sbjct: 179 TYPDEIKEYIGQFVQDPQHLCPNNNC-VLLGVVQKITTVKYNSNIIRQTEFRFQELLKIL 237

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
           ++  F QC++F NYQ R   + + L  A + +E L G QDQ  RL ++ + +  K RIL+
Sbjct: 238 TKKHFKQCLVFCNYQGRVSEVHKLLTKAKWPSEQLYGNQDQMDRLDAIKTLQEYKCRILI 297

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +TDLAARGIDA+NVDLV+N E P++  TYLHR+GRAGR+G+ G+ +TI+S
Sbjct: 298 STDLAARGIDASNVDLVVNFEPPYEWQTYLHRIGRAGRFGSYGMAVTILS 347


>gi|354500436|ref|XP_003512306.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Cricetulus
           griseus]
          Length = 788

 Score =  271 bits (694), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/312 (47%), Positives = 199/312 (63%), Gaps = 9/312 (2%)

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           IVQ+KSGTGK+ VF   AL+ L+ L     Q +ILAPTREIAVQI  V+ ++G  ++ L 
Sbjct: 65  IVQAKSGTGKTCVFSTIALDSLL-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGLE 123

Query: 122 VDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG- 177
              FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G 
Sbjct: 124 CHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGS 183

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ   
Sbjct: 184 FQEQINWIYSSLPASKQMLAVSATYPEFLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQ 243

Query: 238 LIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
           ++     P    + EEK   L +L S+ PFNQ ++FSN   R + + + L++  F  E +
Sbjct: 244 VVN--SYPLAHKIFEEKTQHLQELFSRVPFNQALVFSNLHSRLQHLADILSSKGFPTECI 301

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
           SG  +Q  RL ++   K+   R+L++TDL +RGIDA  V+LV+NL++P D  TY+HR+GR
Sbjct: 302 SGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGR 361

Query: 356 AGRYGTRGLVIT 367
           AGR+GT GL +T
Sbjct: 362 AGRFGTLGLTVT 373


>gi|405968212|gb|EKC33304.1| Putative ATP-dependent RNA helicase DDX20 [Crassostrea gigas]
          Length = 872

 Score =  266 bits (680), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 138/312 (44%), Positives = 197/312 (63%), Gaps = 4/312 (1%)

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           IVQ+KSGTGK+ VF V AL   I+      Q ++LAPTREIA QI DV+ S+G  + +L 
Sbjct: 17  IVQAKSGTGKTCVFSVIALEG-IQTESFALQVLVLAPTREIATQIWDVISSIGQCIPSLR 75

Query: 122 VDYFIGGTQVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF 178
              FIGG  V   K+ ++   I VG+PGRIKQ+I+   +  DS+R+F++DEADKL+   F
Sbjct: 76  CHTFIGGMPVVEDKQKLKKCHIAVGTPGRIKQLIETNIMTTDSIRMFVLDEADKLLEESF 135

Query: 179 VEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVAL 238
            E I WIYS LP  KQML +SATY       L  YM +P  +R   +   LLG+KQ   +
Sbjct: 136 QEQINWIYSTLPENKQMLALSATYPEYLAQHLTSYMRNPTFLRLNISDPALLGIKQFKRV 195

Query: 239 IPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
           +     P+  + ++ K +++LLS   F QC+IFSN Q R + + + L +  +    ++G+
Sbjct: 196 VDYHVLPNKVFDNKTKVVIELLSSVNFQQCLIFSNLQTRAQNMADVLISHGWPTACIAGS 255

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
            DQ+ R  ++   K  K R+L++TDL +RGIDA  V++VINL++P D  TYLHR+GRAGR
Sbjct: 256 HDQRDRNEAMSQLKTYKCRVLISTDLTSRGIDADKVNMVINLDVPKDHETYLHRIGRAGR 315

Query: 359 YGTRGLVITIVS 370
           +GT G  +TI+S
Sbjct: 316 FGTFGAAVTIIS 327


>gi|353231317|emb|CCD77735.1| hypothetical protein Smp_171180 [Schistosoma mansoni]
          Length = 744

 Score =  265 bits (678), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/400 (38%), Positives = 231/400 (57%), Gaps = 33/400 (8%)

Query: 1   MAHDI-QKCARTKDVL---------SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMA 50
           +AHD+ Q+  RT DVL         +N   +   D+ +  P+  GL + GF++ SP+Q+ 
Sbjct: 28  LAHDLTQEEKRTADVLGENVSNETCANSRNIHFKDLQLSTPVLHGLYDAGFIRPSPVQVK 87

Query: 51  AFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL-IKLPVQQPQTIILAPTREIAVQITDV 109
           A P    G D IVQ+KSGTGK++VF V  L  + +K P    Q I+L+PTREIA Q   V
Sbjct: 88  AIPLGRLGMDLIVQAKSGTGKTVVFAVVILEAINVKRPT--IQAIVLSPTREIAFQSQMV 145

Query: 110 VRSVGAHVKNLHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFI 166
           +  + +H+  L    F+GG  +    R +    IVVG+PGR++ +++  YL+ + VR F+
Sbjct: 146 IERLASHISGLKCHLFVGGLPLADDLRHLSDCHIVVGTPGRVRYLLEAGYLSTEHVRQFV 205

Query: 167 MDEADKLI-------------NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT--LQ 211
           +DEAD L+             N  F  DI +I+  LP  KQ+L +SATY+ D L    L 
Sbjct: 206 LDEADLLLSGGTDAKLTGGSANNAFPADINYIWWSLPQSKQVLALSATYT-DYLVNEHLP 264

Query: 212 KYMVDPLLIRPEDATRPLLGVKQLVALI-PECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
           +YM DP ++R       L+GV+Q   +I P    P   +  + K L +LL+ T F QC+I
Sbjct: 265 RYMNDPAIVRLAVKDPALIGVRQFFHIIQPTTLAPISIFDAKIKFLCKLLNATEFQQCLI 324

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           FSN+    + +C+ L +  +   Y+S + +Q  R  + +  +  + R+L+TTDL +RGID
Sbjct: 325 FSNFHNNAQDLCDALCSRGWPVSYISSSLEQGERFRAFNKLRTFQCRVLITTDLTSRGID 384

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           A NV+LVI+LE+P +  TY+HR+GRAGR+G+ G  + IVS
Sbjct: 385 AENVNLVISLEVPWEHETYVHRVGRAGRFGSYGASVIIVS 424


>gi|241257335|ref|XP_002404550.1| ribosomal DEAD box protein, putative [Ixodes scapularis]
 gi|215496660|gb|EEC06300.1| ribosomal DEAD box protein, putative [Ixodes scapularis]
          Length = 361

 Score =  264 bits (675), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 149/364 (40%), Positives = 218/364 (59%), Gaps = 12/364 (3%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AH +    R++DV    DV F+  +L E+ +  GL+++GFVK SPIQ+ A P  L G+D
Sbjct: 5   IAHSLDAVWRSEDVDHGDDVTFDQFMLSER-VLTGLRKSGFVKPSPIQVQAIPLGLCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            +VQ+KSGTGK+ VF V AL + + +     Q +ILAPTREIAVQ  D VR +G  +  L
Sbjct: 64  LVVQAKSGTGKTCVFAVLAL-EAVDVGTHAVQVLILAPTREIAVQTCDTVRCLGCELPGL 122

Query: 121 HVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
           H   FIGG  + +  + +    I V + GR+ Q+++   L +  VRL ++DEAD+++   
Sbjct: 123 HCYAFIGGVPLPQDLQKLASCHIAVATMGRLCQLVRSGQLRLSQVRLLVLDEADQMLGEA 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQ-KYMVDPLLIRPEDATRPLLGVKQLV 236
           F+ED++ ++ +LP  KQ++  SATY       L+ KY+  P L+R       LLGV Q  
Sbjct: 183 FLEDLSDLWGRLPSSKQVVATSATYPPAVARLLEEKYLHQPALVRLGAEDPALLGVSQWY 242

Query: 237 ALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
             +         ++ +   L  LL   PF+QC++F N Q R   + E L  +  G + LS
Sbjct: 243 LAVEGA------FLAKLSSLESLLRHMPFSQCLVFVNSQARARSLSERLNRSLGGVQLLS 296

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           GAQ Q+ R+A+L   K  + R+LV+TDLAARGIDA  V+LV+N ++P D  T+LHR GRA
Sbjct: 297 GAQGQEERMAALARLKGFRCRLLVSTDLAARGIDAERVNLVVNFDLPWDLETHLHRSGRA 356

Query: 357 GRYG 360
           GRYG
Sbjct: 357 GRYG 360


>gi|158294110|ref|XP_315400.4| AGAP005391-PA [Anopheles gambiae str. PEST]
 gi|157015412|gb|EAA11295.4| AGAP005391-PA [Anopheles gambiae str. PEST]
          Length = 1130

 Score =  264 bits (674), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 179/569 (31%), Positives = 289/569 (50%), Gaps = 49/569 (8%)

Query: 9   ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSG 68
            RT DV+ +  +LFE   L E P++Q L  N FV  SPIQ  A P     +D +VQ+KSG
Sbjct: 11  VRTADVMVDRSLLFERMSLSE-PVKQALARNNFVHPSPIQARAIPLARCDFDLLVQAKSG 69

Query: 69  TGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG 128
           TGK++VF +  +       +  PQ++ + PTREIAVQ+  V+  +G  + N     FIGG
Sbjct: 70  TGKTLVFAITIVESH-DPEIAFPQSLTIVPTREIAVQVESVLNRIGGELGNFKARSFIGG 128

Query: 129 TQVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++   ++ +Q    VVG+PGRI  +IK   LN   +R  +MDEAD L+      DI  I
Sbjct: 129 MEISVDRKNLQNCSAVVGTPGRILHLIKSNVLNTSYIRTLVMDEADTLLQPSMRGDIDKI 188

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLL-IRPEDATRPLLGVKQLVALIPECKN 244
              L   +Q +V SAT+ ++    L +YM    + + P+     L G+KQ V  +P   +
Sbjct: 189 VGALSDKRQTIVCSATFYNNRDRELLRYMNAKFIGVTPKREVPLLFGIKQFVRELPAEPD 248

Query: 245 PSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKAR 304
                + +   L ++  Q  F QCV+F+N   + E  C  L  A + AE ++   +Q+ R
Sbjct: 249 NVKDLMAKVGVLNEIFQQINFAQCVVFANTISKAETYCTYLKKAGWPAEVINSGMEQRFR 308

Query: 305 LASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGL 364
           L +++ F+  + R+L+ T+L ARGID  NV+LVIN ++P D ATYLHR+GRAGR+GT+G+
Sbjct: 309 LKAIEDFRSFRARVLIATNLIARGIDVENVNLVINADVPKDNATYLHRIGRAGRFGTKGI 368

Query: 365 VITIVS-AESLVKFHSLMGEINLDHAFNVGLVPDNLT--------GD---QINWTQRVQT 412
            IT+VS  + + ++  ++ +I  +  F + L   NL         GD   ++  +Q VQ 
Sbjct: 369 AITLVSGVKDMERYRRILHDIGGNEMFVLKLPQGNLEDVWQFERYGDRYEKLFASQMVQE 428

Query: 413 LLAKPLDQA-----------------------QEREDVEQTAEESSKVENTKPLRGAPSK 449
           +  K +DQ                         E + ++ + E+S+  E T     AP+ 
Sbjct: 429 IRDKDVDQLFLKAMKMLGKQLGNGGEPSRSNNNEEQKLDDSLEKSTSDEETVVELDAPNG 488

Query: 450 EVTKKG--ASKEGTKWNLTDGQSEEESDSENDGKPDENGSQRGSKRSKE--FKTQEKCV- 504
             ++     +    K   T+G + E + + + GKP+E G+   S  + +    + EK   
Sbjct: 489 TTSQPAVEVAAPAVKGKTTNGHATELNGNVSPGKPEETGAHASSTVAMDGLSMSMEKLSL 548

Query: 505 -KGAGEDENGDRKASKDEQKIDGANSAEK 532
            +G     NG+R      +++D  N  +K
Sbjct: 549 ERGGALQANGERGGKT--KRLDSLNGNQK 575


>gi|195442676|ref|XP_002069075.1| GK24052 [Drosophila willistoni]
 gi|194165160|gb|EDW80061.1| GK24052 [Drosophila willistoni]
          Length = 965

 Score =  262 bits (669), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/392 (35%), Positives = 234/392 (59%), Gaps = 16/392 (4%)

Query: 1   MAHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGY 59
           +AH+++    RT DV +     F +   +++ +  GLQ N FV  + IQ AA P  L G 
Sbjct: 5   IAHNLENGNYRTSDVAAGQAKSFSDINHLKREVLDGLQRNNFVTPTKIQAAAIPMALTGM 64

Query: 60  DAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKN 119
           D +VQSKSGTGK++++V+AA+  L K+ ++QPQ +I+ PTRE+A+Q+    +++      
Sbjct: 65  DLLVQSKSGTGKTLIYVIAAMQMLQKM-IKQPQVLIIVPTRELAIQVESTFQAMAEK--- 120

Query: 120 LHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
             V  FIGGT V + ++ +   +IV+G+ GR+  + + K  NM  ++L ++DEAD+L  T
Sbjct: 121 -SVCAFIGGTDVTKDRQRIHQCRIVIGTLGRLLHLYESKVFNMSEIKLLVLDEADQLYMT 179

Query: 177 G-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQL 235
               + +  + + +P   Q++  SAT+ ++    L K M+ P+LI   +    LLG++Q 
Sbjct: 180 KDLKKTVGCLVNHMPKRLQIIACSATFENNLDEHLAKLMLKPILISNSERATVLLGIRQF 239

Query: 236 VALIPECKN---PSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGA 292
           V   PE  N     LR V+  + +V   +Q P+ Q + F+N  +R +     L  ++   
Sbjct: 240 VYEFPEQVNGIEDMLRKVEAVQNIV---AQLPYEQAIFFANSLIRADSFRNYLNASDIQC 296

Query: 293 EYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHR 352
             LSGA DQ+ RL + + ++R  +R +V TDL ARG+D++  +LVINL+IP D  TYLHR
Sbjct: 297 ALLSGALDQRKRLEAFEGYRRFTIRTMVATDLMARGVDSSYANLVINLDIPRDHVTYLHR 356

Query: 353 MGRAGRYGTRGLVITIVSAESLVKFHSLMGEI 384
           +GRAGR+G++G+ IT++S+    KF  ++ +I
Sbjct: 357 IGRAGRFGSKGIAITLLSSSESAKFKEMLSQI 388


>gi|395535640|ref|XP_003769830.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Sarcophilus
           harrisii]
          Length = 721

 Score =  260 bits (665), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 201/329 (61%), Gaps = 5/329 (1%)

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK---RPVQIVVGSP 145
           Q+ + +ILAPTREIAVQI  V+ ++G  ++ L    FIGGT + + K   +   I VGSP
Sbjct: 25  QEAKILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSP 84

Query: 146 GRIKQMIKLKYLNMDSVRLFIMDEADKLINTG-FVEDITWIYSQLPPMKQMLVVSATYSH 204
           GRIKQ+I+L YLN  S+RLFI+DEADKL+  G F E I WIYS LP  KQML VSATY  
Sbjct: 85  GRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLAVSATYPE 144

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
              + L +YM DP  +R   +   L+G+KQ   ++     P   + ++ + L +L S+ P
Sbjct: 145 FLASALTRYMRDPTFVRLNSSDPSLIGLKQYYKVVNSHPLPHKIFEEKTQHLQELFSRIP 204

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
           FNQ ++FSN   R + + + L++  F AE +SG+ +Q  RL ++   K+   R+L++TDL
Sbjct: 205 FNQALVFSNLHSRAQHLADILSSKGFPAECISGSMNQNQRLDAMAKLKQFHCRVLISTDL 264

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS-AESLVKFHSLMGE 383
            +RGIDA  V+LV+NL++P D  TY+HR+GRAGR+GT GL +T     E      ++  +
Sbjct: 265 TSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLAVTYCCRGEEENMMMTIAQK 324

Query: 384 INLDHAFNVGLVPDNLTGDQINWTQRVQT 412
            NL+       +P  L  + ++W   V+ 
Sbjct: 325 CNLNLLCLPDPIPPGLMEECLDWDVEVKA 353


>gi|170057345|ref|XP_001864443.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
 gi|167876765|gb|EDS40148.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
          Length = 1049

 Score =  259 bits (663), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/403 (36%), Positives = 229/403 (56%), Gaps = 8/403 (1%)

Query: 3   HDIQ-KCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           H++Q +  RT+DV  +  + FE   L E  +R GL  N FV  SPIQ  A P    G D 
Sbjct: 4   HNLQDERVRTEDVEFDRSLRFEQMFLSEAVVR-GLSRNNFVMPSPIQARAIPLGKLGLDL 62

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           +VQ+KSGTGK++VF V  L       V  PQ++++ PTREIAVQI  V+  +   + N  
Sbjct: 63  LVQAKSGTGKTLVFSVLILEGH-NPDVPFPQSLVVVPTREIAVQIEQVLNRIAYSMANFR 121

Query: 122 VDYFIGGTQVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF 178
              FIGG  + + ++ +Q    VVG+PGRI  +IK   LNM  +++ ++DEAD LI    
Sbjct: 122 AKSFIGGLDIVQDRKNLQNCTAVVGTPGRIWHLIKSGVLNMSHIKMLVLDEADSLIAGTL 181

Query: 179 VEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLL-IRPEDATRPLLGVKQLVA 237
             D+  I   +P  +Q LV SAT+  +    L KYM +  + + P+     L G++Q V 
Sbjct: 182 QSDVDQIIKAVPKKRQTLVCSATFYKNRDRELLKYMKEQFIGVTPKKEVPVLHGIRQFVR 241

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
            +PE K+     + +  +L  +  + PF+QC++F+N Q + E     L    +  E + G
Sbjct: 242 ELPEAKDNIKEMMAKIHELDSIFKKLPFSQCLLFTNSQTKAESYSSQLTRIGWPTEVIRG 301

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
            Q+Q+ RL ++++ K+ + RIL  TD+ ARGIDA NV+LVIN+++P D   YLHR+GR G
Sbjct: 302 GQEQRVRLKTVENLKQFRCRILSATDVIARGIDAENVNLVINVDVPVDNMVYLHRIGRGG 361

Query: 358 RYGTRGLVITIVS-AESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           R+GT+ L IT+ + A+   +F  ++ +I  +  F   L  + L
Sbjct: 362 RFGTQSLAITLTAKAKDTERFRKILFDIGGNEMFVYQLPKEEL 404


>gi|256087699|ref|XP_002580002.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
          Length = 1574

 Score =  259 bits (662), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/400 (38%), Positives = 231/400 (57%), Gaps = 33/400 (8%)

Query: 1    MAHDI-QKCARTKDVL---------SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMA 50
            +AHD+ Q+  RT DVL         +N   +   D+ +  P+  GL + GF++ SP+Q+ 
Sbjct: 1132 LAHDLTQEEKRTADVLGENVSNETCANSRNIHFKDLQLSTPVLHGLYDAGFIRPSPVQVK 1191

Query: 51   AFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL-IKLPVQQPQTIILAPTREIAVQITDV 109
            A P    G D IVQ+KSGTGK++VF V  L  + +K P  Q   I+L+PTREIA Q   V
Sbjct: 1192 AIPLGRLGMDLIVQAKSGTGKTVVFAVVILEAINVKRPTIQ--AIVLSPTREIAFQSQMV 1249

Query: 110  VRSVGAHVKNLHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFI 166
            +  + +H+  L    F+GG  +    R +    IVVG+PGR++ +++  YL+ + VR F+
Sbjct: 1250 IERLASHISGLKCHLFVGGLPLADDLRHLSDCHIVVGTPGRVRYLLEAGYLSTEHVRQFV 1309

Query: 167  MDEADKLI-------------NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT--LQ 211
            +DEAD L+             N  F  DI +I+  LP  KQ+L +SATY+ D L    L 
Sbjct: 1310 LDEADLLLSGGTDAKLTGGSANNAFPADINYIWWSLPQSKQVLALSATYT-DYLVNEHLP 1368

Query: 212  KYMVDPLLIRPEDATRPLLGVKQLVALI-PECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            +YM DP ++R       L+GV+Q   +I P    P   +  + K L +LL+ T F QC+I
Sbjct: 1369 RYMNDPAIVRLAVKDPALIGVRQFFHIIQPTTLAPISIFDAKIKFLCKLLNATEFQQCLI 1428

Query: 271  FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
            FSN+    + +C+ L +  +   Y+S + +Q  R  + +  +  + R+L+TTDL +RGID
Sbjct: 1429 FSNFHNNAQDLCDALCSRGWPVSYISSSLEQGERFRAFNKLRTFQCRVLITTDLTSRGID 1488

Query: 331  AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            A NV+LVI+LE+P +  TY+HR+GRAGR+G+ G  + IVS
Sbjct: 1489 AENVNLVISLEVPWEHETYVHRVGRAGRFGSYGASVIIVS 1528


>gi|443694549|gb|ELT95649.1| hypothetical protein CAPTEDRAFT_110471 [Capitella teleta]
          Length = 331

 Score =  258 bits (660), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 144/328 (43%), Positives = 199/328 (60%), Gaps = 9/328 (2%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           AH I +  RT DVLS   V F   +L+  P+ +GL+E GF + SPIQ+   P    G D 
Sbjct: 7   AHKIDQKPRTHDVLSGETVDFPG-LLLSAPVLKGLKEAGFERPSPIQLKTIPLGRCGLDL 65

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           IVQ+KSGTGK+ VF V AL  LI L     Q +++APTREIAVQI +V++++GA +  L 
Sbjct: 66  IVQAKSGTGKTCVFAVIALESLI-LDTNALQVLVIAPTREIAVQIWEVMKTLGAAMPQLR 124

Query: 122 VDYFIGGTQV--ERPK-RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF 178
              FIGG  V  + PK +   I VG+PGR+KQ+I+  ++N DS+RLF++DEADKL++  F
Sbjct: 125 CYTFIGGLPVSDDIPKLKKCHIAVGTPGRLKQLIENGHMNTDSIRLFVLDEADKLMDDSF 184

Query: 179 VEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVAL 238
            E + WIYS LP  KQML +SATY       L  YM +P  +R   +   LLG++Q    
Sbjct: 185 QESVNWIYSCLPDTKQMLALSATYPEVLAQHLTAYMCNPTFVRLNASDPALLGIRQYYRS 244

Query: 239 IPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
           IP   +P +    E K   L+++LS   F QC++FSN Q R E +CE L +  +   ++ 
Sbjct: 245 IP--YHPLIHKNHERKTKILIEILSSVKFQQCLVFSNLQTRAESLCEQLNHKGWPTAFIG 302

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDL 324
           G QDQ  RL ++   K  K R+LV+TDL
Sbjct: 303 GMQDQHQRLNAMAQLKHFKCRVLVSTDL 330


>gi|281201805|gb|EFA76013.1| putative RNA helicase [Polysphondylium pallidum PN500]
          Length = 701

 Score =  252 bits (643), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/399 (38%), Positives = 231/399 (57%), Gaps = 38/399 (9%)

Query: 10  RTKDV-LSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSG 68
           RTKDV L   + +  +++++ +    GL++ GF+K SPIQ+ A P  L G D I Q+KSG
Sbjct: 28  RTKDVTLDESNSVEFSEMMLSQETLDGLKQCGFIKPSPIQVQAIPLALTGRDIIAQAKSG 87

Query: 69  TGKSIVFVVAALNKLIKL---PV-----------------------QQPQTIILAPTREI 102
           TGK++VF V AL  ++KL   P+                       + P  +IL+PTREI
Sbjct: 88  TGKTVVFSVVALETVLKLRTTPIPKDRQELLDMDDESYAAAISGVPRHPVVMILSPTREI 147

Query: 103 AVQITDVVRSVGAHVKNLHVDYFIGGT-QVERPKRP--VQIVVGSPGRIKQMIKLKYLNM 159
           AVQ  DVV  +   +K +    FIGG  +V+   R    QIVVG+PGRI+ +I+   L  
Sbjct: 148 AVQSCDVVNQLARSMKYIKAASFIGGLREVDDRHRLSGCQIVVGTPGRIRSLIESLTLRT 207

Query: 160 DSVRLFIMDEADKLINTGFVEDITWIYSQLP-PMKQMLVVSATYSHDNLATLQKYM-VDP 217
           D ++L I+DEADKL++ GF +DI W++  LP   +Q L +SATY    L  ++ YM  D 
Sbjct: 208 DDIKLLILDEADKLLDMGFSKDINWLHRALPVSQRQTLALSATYPVSVLNVVKAYMRADV 267

Query: 218 LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV---QLLSQTPFNQCVIFSNY 274
           + +R    T  L G+ Q    +   +NP++ Y   ++K+     LL Q  F Q ++F + 
Sbjct: 268 MEVRVGSDTPSLTGITQYYQFV---ENPAISYQAFKEKIASLLLLLEQLGFYQAIVFVSE 324

Query: 275 QLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANV 334
           + R E +C+ L    +   Y++GA +Q+ RL  ++  K  K+RILV+TDL ARGID   V
Sbjct: 325 RQRAEEVCKLLVRRGWPTRYIAGAMEQRERLLVMEELKDFKLRILVSTDLIARGIDIERV 384

Query: 335 DLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           +LV+N+++P D  TY HR+GR GR+GT G+ ++ +S +S
Sbjct: 385 NLVVNIDMPRDYETYFHRIGRTGRFGTYGVSVSFISKDS 423


>gi|195996683|ref|XP_002108210.1| hypothetical protein TRIADDRAFT_19042 [Trichoplax adhaerens]
 gi|190588986|gb|EDV29008.1| hypothetical protein TRIADDRAFT_19042 [Trichoplax adhaerens]
          Length = 393

 Score =  250 bits (638), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 138/339 (40%), Positives = 203/339 (59%), Gaps = 22/339 (6%)

Query: 26  VLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK 85
           +L+ + + +GL++ G++K SPIQ+ + P    G D I Q+KSGTGK+ VFVV AL +++ 
Sbjct: 32  LLLSQNVLRGLRDAGYIKPSPIQLKSIPVARCGLDLIAQAKSGTGKTCVFVVVAL-EIVD 90

Query: 86  LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE---RPKRPVQIVV 142
           L +  PQ +ILAPTREIA+QI  VV ++G  V  L    FIGG  V+   +  +   + V
Sbjct: 91  LTICSPQVLILAPTREIAIQINQVVNTIGKFVGGLSSQVFIGGLPVKLDNQKTKNCHLAV 150

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+ Q+I+   L   S+RLF++DEADKL+   F E +  I+  LP  KQ+L +SATY
Sbjct: 151 GTPGRVLQLIESGALATKSIRLFVLDEADKLLEKNFTEQLNQIFKHLPTSKQILALSATY 210

Query: 203 SHDNLATLQKYMVDPLLIRPEDATRPLL-GVKQLVALIPECKNPSLRYVDEEKKLVQLLS 261
                  L K M +P +IR  D+ RP+L GVKQ    I         +  +  KL  +L+
Sbjct: 211 PECLTKLLIKCMKNPQVIR-LDSKRPVLHGVKQYFCKISSYALSHKIFSLKIDKLSYILT 269

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
           + PF+QC++FSNYQ                   +  A  QK R+ ++        R+L++
Sbjct: 270 KIPFHQCLVFSNYQ----------------TVSVLRAILQKDRMDAIKKMNDFSCRVLIS 313

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYG 360
           +DL ARG+D  N+DLV+NL++P+D  TYLHR+GRAGR+G
Sbjct: 314 SDLTARGVDIENIDLVVNLDLPNDPETYLHRVGRAGRFG 352


>gi|320170286|gb|EFW47185.1| DEAD box polypeptide 20 [Capsaspora owczarzaki ATCC 30864]
          Length = 563

 Score =  249 bits (637), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 162/469 (34%), Positives = 256/469 (54%), Gaps = 15/469 (3%)

Query: 26  VLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK 85
           +L+  P+  GL   GF + S +Q  A P    G D IVQ+K+GTGK+ VF V AL + + 
Sbjct: 68  MLLSAPVLAGLSAAGFTRPSLVQAHAIPIGKTGADLIVQAKNGTGKTCVFSVLAL-EAVD 126

Query: 86  LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKN-LHVDYFIGGTQ--VERPK-RPVQIV 141
             +  PQ +I+APTRE+AVQI DVV+S+G  +K  L  + FIGGT    ++P  R   IV
Sbjct: 127 TSIAGPQVMIVAPTREVAVQIRDVVKSIGEKMKPPLQCNVFIGGTASAADKPSARVSHIV 186

Query: 142 VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSAT 201
           VG+PGR+  +I  K+L    +++F+MDEAD+L+    +  +  I+S LP  KQ+L +SAT
Sbjct: 187 VGTPGRLMGLITAKWLPTQGIKMFVMDEADRLLQEPCLPHVNTIFSGLPKSKQVLALSAT 246

Query: 202 YSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV-ALIPECKNPSLRYVDEEKKLVQLL 260
                +  L+ +M +P  +R       L G+ Q    ++ E   P+ +   +   L+++L
Sbjct: 247 LDESLVRQLESHMTNPKQVRITPERPTLAGISQYKRVVVCESLLPAQQTESKVTALLEVL 306

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
           S+  F+QCV+F   +   + +   L +  + A ++SG QDQ  RL  +   +  ++R+LV
Sbjct: 307 SKVQFHQCVVFCGSRSSADNLAARLCDEQWPATFISGDQDQAQRLHVMQLLRSFRLRVLV 366

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           +TDL ARGID   ++LVIN ++P D  TYLHR+GR GR+GT G+ IT++ A  L + +  
Sbjct: 367 STDLIARGIDVDRINLVINFDLPRDPETYLHRIGRTGRFGTYGIAITLLLASELDQLNDF 426

Query: 381 MGEINLDHAFNVGLVPDNLTGDQINWTQRV-QTLLAKPLDQAQEREDVEQTAE---ESSK 436
              ++   +     +P+ L    +  T+++ +T LA     ++ER  +   A    + +K
Sbjct: 427 ASSLHAQISDLPETMPNTLHHFDLGETEKIAETKLANL--TSEERSTLYTEAAIRPKPAK 484

Query: 437 VENTKPLRGAPSKEVTKKGASKEGTKW-NLTDG--QSEEESDSENDGKP 482
             N  PLRG  SK       + E      +T G   SE  SD   +  P
Sbjct: 485 HSNPPPLRGTYSKHRQAANQTDEAASTPTITTGTYSSEPSSDHSIESSP 533


>gi|324504396|gb|ADY41899.1| ATP-dependent RNA helicase DDX20 [Ascaris suum]
          Length = 937

 Score =  249 bits (637), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/358 (42%), Positives = 213/358 (59%), Gaps = 17/358 (4%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
            L + GF+  SP+Q AA P  L G+D +VQ+KSGTGK++VF + AL  L     +QPQ +
Sbjct: 33  ALTKAGFIYPSPVQAAAIPIGLMGFDMLVQAKSGTGKTLVFALMALEGL-NAQRRQPQVM 91

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ-----VERPKRPVQIVVGSPGRIK 149
           I+APTREIA+QI   VR +   V  +HV  F+GG +     ++  ++ V I VG+ GR+ 
Sbjct: 92  IIAPTREIAMQIAVTVRRLAPPV--IHVGVFVGGGRSVADDIKEIRKGVHIAVGTTGRLC 149

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
           Q++    L  + V LF++DEADKL+   F +DI +++S LP  KQM V SATY  D   T
Sbjct: 150 QLVNDDLLPTNHVHLFVLDEADKLMEENFQKDINFLFSSLPNNKQMAVFSATYPGDLDET 209

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCV 269
           L +YM    LIR       LLG+KQ VA+      P+         L +LLS   F QC+
Sbjct: 210 LARYMKKAHLIRLNAEDVQLLGIKQYVAMSYSEDGPT--------SLHRLLSSITFTQCL 261

Query: 270 IFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGI 329
           +F+N Q + E I   L +    AE +SGA +Q  R   +   K  ++++LV+TDL ARGI
Sbjct: 262 VFANDQQKCERIVSTLHSNGLDAELISGAMEQSDRNRVMKRLKNYQLKVLVSTDLTARGI 321

Query: 330 DAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK-FHSLMGEINL 386
           DA NV++V+N+  P  A  YLHR+GRAGR+G  G+ ITI+S    VK F  +M + NL
Sbjct: 322 DAENVNVVVNVGCPLSAEIYLHRIGRAGRFGGYGVSITILSMGKDVKRFTEIMKQANL 379


>gi|195129233|ref|XP_002009063.1| GI13838 [Drosophila mojavensis]
 gi|193920672|gb|EDW19539.1| GI13838 [Drosophila mojavensis]
          Length = 1047

 Score =  249 bits (636), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/379 (36%), Positives = 231/379 (60%), Gaps = 11/379 (2%)

Query: 1   MAHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGY 59
           +AHD++    RT DV +     FE  + + + + + LQ + F+  + IQ AA P  + G 
Sbjct: 5   LAHDLENSEQRTSDVAAG-SFSFEQ-LNLNRSLSKCLQGHKFLTPTKIQAAAIPMAIAGM 62

Query: 60  DAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVG--AHV 117
           D +VQSKSGTGK++++V+AAL K+ K  V  PQT+I+ PTRE+A+Q+ D V  +    H 
Sbjct: 63  DLLVQSKSGTGKTLIYVLAALQKIDK-SVASPQTLIIVPTRELAIQVEDTVNGLANKLHN 121

Query: 118 KNLHVDY-FIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKL 173
           +N ++   FIGGT V+R +  +   +I+VG+PGR+  +I+    N  +V+L ++DEAD+L
Sbjct: 122 RNAYLCVSFIGGTDVKRDRMRMARGRIIVGTPGRLLHLIQNNVFNTSAVKLLVLDEADQL 181

Query: 174 INT-GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
             T    +D+  + + L P  Q++  SATY +     L K M  P+L+   +    L+GV
Sbjct: 182 YCTDSLQKDVQALVASLQPGIQIIACSATYPNALDERLAKLMHKPVLVSNSERATILVGV 241

Query: 233 KQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGA 292
           +Q V  +P   N     + + K + ++++Q  ++Q ++F++ Q R +     L       
Sbjct: 242 RQFVYELPAQVNSMQDMMSKLKAVQKIITQVAYDQVILFASSQSRADSFRNYLQRDGIEC 301

Query: 293 EYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHR 352
           E +SGA  Q  RL +  +++  K+RI+V+TDL ARG+D+++ +LVINL+ P+D  TYLHR
Sbjct: 302 ELMSGAMKQSERLQTFQAYRNFKMRIIVSTDLMARGVDSSHANLVINLDPPNDLVTYLHR 361

Query: 353 MGRAGRYGTRGLVITIVSA 371
           +GRAGR+G++G+ IT +S+
Sbjct: 362 IGRAGRFGSKGIAITFISS 380


>gi|341886012|gb|EGT41947.1| CBN-MEL-46 protein [Caenorhabditis brenneri]
          Length = 898

 Score =  247 bits (631), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/389 (35%), Positives = 231/389 (59%), Gaps = 20/389 (5%)

Query: 26  VLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK 85
           +LI + +++ L+ + F++ SP+Q  A P  L G D +VQ+KSGTGK++VF + A++ L  
Sbjct: 29  LLINESVQERLRAHQFLRPSPVQAGAIPIGLLGRDLLVQAKSGTGKTLVFSILAVHSL-D 87

Query: 86  LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT-----QVERPKRPVQI 140
           L     Q +I+ PTREIA QI + VR +      + V   IGG+     Q+E       I
Sbjct: 88  LKSSFVQKVIITPTREIATQIKETVRKLAPPKARISV--CIGGSEHKLIQMELKNNRPHI 145

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           ++G+PGR+ Q++K+K +NM  V  F++DEADKL++  F ++I ++ + LPP++Q+ V SA
Sbjct: 146 IIGTPGRMAQLVKMKAINMSHVDFFVLDEADKLMDQIFRDNINFVINALPPVRQVAVFSA 205

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           TY  +    L  ++ D   +R       L+G+KQ V  +  C +P L      +KLV +L
Sbjct: 206 TYPRNLDLLLATFLRDASHVRFNVENVQLVGIKQFV--VQNC-SPVL------EKLVHIL 256

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
            +T + Q ++F++  ++ E I  +L N      ++S    QK R  ++D  +  +V+ILV
Sbjct: 257 KRTRYVQALVFTDKIMKVESIATHLKNEGLDVTFVSSLMSQKERQFAVDQLRFKRVKILV 316

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           ++DL ARGIDA NV+LV+N+E   +  TY HR+GRA R+G +G  +T++  ++ +K  + 
Sbjct: 317 SSDLTARGIDADNVNLVVNVEAAANEDTYFHRIGRAARFGAQGAAVTLLEDDTALKGFTA 376

Query: 381 M---GEINLDHAFNVGLVPDNLTGDQINW 406
           M   G++ +   ++V ++P +L  DQ  W
Sbjct: 377 MAYRGKVTVKRVWDVEMLPVDLVNDQEFW 405


>gi|195493167|ref|XP_002094300.1| GE20271 [Drosophila yakuba]
 gi|194180401|gb|EDW94012.1| GE20271 [Drosophila yakuba]
          Length = 1057

 Score =  247 bits (630), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 124/342 (36%), Positives = 204/342 (59%), Gaps = 5/342 (1%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
           GL+ + FV  + IQ AA P  L   D IVQSKSGTGK++++V+AA+       + +P  +
Sbjct: 39  GLKRHNFVTPTKIQAAAIPMALTNMDLIVQSKSGTGKTLIYVIAAMQGY-HAKMTRPHAL 97

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---IVVGSPGRIKQM 151
           I+ PTRE+A+Q+ D    +    ++     FIGGT+V + +R +Q   I++G+PGR+  +
Sbjct: 98  IVVPTRELAIQVQDTFFYLCESYRDFKCSAFIGGTEVAKDRRRMQASRIIIGTPGRLLHL 157

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVED-ITWIYSQLPPMKQMLVVSATYSHDNLATL 210
            + + L++  + L ++DEAD+L  T  ++D ++ +   LP  +Q++  SATY  D    L
Sbjct: 158 YQNRVLDVSKLGLLVLDEADQLYQTKSLQDTVSKLIQALPKNRQIIACSATYDQDLDVRL 217

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            K M  P+LI   +    LLG++Q V  +P+  N       + K L Q+ +Q P+ Q V+
Sbjct: 218 AKIMNKPMLISNSERATVLLGIRQFVYELPQQTNSVEEMRLKLKVLAQIFNQLPYEQAVL 277

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F++ Q+R +     L  +      +SGA +Q  RL   + ++   +R LV TDL ARG+D
Sbjct: 278 FASSQMRADSYKNYLTASGIECHLISGAMEQSERLNVFEGYRNFTMRTLVATDLMARGVD 337

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           + + +LVIN++ P D  TYLHR+GRAGR+G++G+ IT +++E
Sbjct: 338 SPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASE 379


>gi|195171491|ref|XP_002026539.1| GL15598 [Drosophila persimilis]
 gi|194111445|gb|EDW33488.1| GL15598 [Drosophila persimilis]
          Length = 1107

 Score =  246 bits (627), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 126/348 (36%), Positives = 204/348 (58%), Gaps = 5/348 (1%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +GL    F   + IQ AA P  L G D +VQSKSGTGK++++VV AL ++  L 
Sbjct: 32  LRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTGKTLIYVVTAL-QMCSLS 90

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK---RPVQIVVGS 144
            Q P+ +++ PTRE+A+Q+ D  R +G  +++  V  F+GGT V R +   R   + +G+
Sbjct: 91  TQHPEVLVILPTRELALQVHDTFRFLGEKLRSFKVSSFMGGTDVTRDREKLRNCHVAIGT 150

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVE-DITWIYSQLPPMKQMLVVSATYS 203
           PGR+ Q+ +   LNM  V+L ++DEAD+L  T  ++  +  + + LP  +Q++  SAT+ 
Sbjct: 151 PGRLLQLHEKGVLNMSMVKLLVLDEADQLYVTASLQKTVNALIAVLPLQRQVIACSATFD 210

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
            +    + K M  P+LI   +    LLG++Q V  +PE  N  L    + + L ++ +Q 
Sbjct: 211 QNLDEKIAKMMEKPVLISNSERATVLLGIRQFVYELPEQVNNLLEMRLKLEALKKIFAQL 270

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
            + Q V+FSN ++R +  C  L         LSG   Q+ R    + ++   VR +V TD
Sbjct: 271 NYEQAVLFSNSKMRADSYCSYLNAGKIPCALLSGDLAQENRSKVFEGYRNFSVRTIVATD 330

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           L ARG+D+ + +LVINL+ P D  TYLHR+GRAGR+G++ + IT +S+
Sbjct: 331 LIARGVDSHHANLVINLDPPTDHITYLHRIGRAGRFGSKAIAITFISS 378


>gi|195017374|ref|XP_001984586.1| GH16548 [Drosophila grimshawi]
 gi|193898068|gb|EDV96934.1| GH16548 [Drosophila grimshawi]
          Length = 1021

 Score =  245 bits (626), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/380 (36%), Positives = 230/380 (60%), Gaps = 13/380 (3%)

Query: 1   MAHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGY 59
           +AHD+     RT DV +   V FE ++ ++  I + LQ + FV  + IQ AA P  L G 
Sbjct: 5   IAHDLANGEQRTSDVAAG-SVSFE-ELQLKHSILKCLQLHKFVTPTKIQAAAIPMALAGM 62

Query: 60  DAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKN 119
           D +VQSKSGTGK++++V+AA+ +L+   V +PQ +I+ PTRE+A+Q+ D V  + + ++N
Sbjct: 63  DLLVQSKSGTGKTLIYVLAAM-ELMDRSVAKPQALIIVPTRELAIQVEDTVNGLASKMRN 121

Query: 120 ----LHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
               L V  FIGGT V+R +  +   +I+VG+PGR+  ++     N+  ++L ++DEAD+
Sbjct: 122 TSEYLCVS-FIGGTDVKRDRLRMAKGRILVGTPGRLLHLMHNNVFNISGLKLLVLDEADQ 180

Query: 173 LINTGFVE-DITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLG 231
           L  T  ++ D+  + S L   KQ++  SATY +     L + M  P+L+   +    LLG
Sbjct: 181 LFATDTLQKDVQSLISSLQSRKQIIACSATYPNALDERLAQLMHKPVLVSNSERATVLLG 240

Query: 232 VKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFG 291
           ++Q V  + E  N  L  +D+   L ++ +Q P+ Q ++F++ Q R +     L      
Sbjct: 241 IRQFVYELQEQPNSMLEMLDKLTALHKIFAQLPYEQGILFASSQSRADSFRNYLRRDGIE 300

Query: 292 AEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLH 351
            + +SGA  Q  RL +  +++  K+R +V TDL ARG+D ++ +LVINL+ P+D  TYLH
Sbjct: 301 CDLMSGAMKQSERLETFQAYRNFKMRTMVATDLLARGVDFSHANLVINLDPPNDLVTYLH 360

Query: 352 RMGRAGRYGTRGLVITIVSA 371
           R+GRAGR+G++G+ IT +S+
Sbjct: 361 RIGRAGRFGSKGIAITFISS 380


>gi|194750993|ref|XP_001957811.1| GF23832 [Drosophila ananassae]
 gi|190625093|gb|EDV40617.1| GF23832 [Drosophila ananassae]
          Length = 1128

 Score =  245 bits (625), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 230/387 (59%), Gaps = 7/387 (1%)

Query: 1   MAHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGY 59
           +AH+++    RT DV     VL  + + +++ + +GLQ N F+  + IQ AA P VL+  
Sbjct: 5   LAHNLENGEKRTSDVEPG-QVLSFSQLRLKRDVMRGLQRNKFMTPTRIQAAAIPLVLDEM 63

Query: 60  DAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKN 119
           D ++QSKSGTGK++++V+ A+N      ++ P  +I+ PTRE+A+Q+ D    +  +++ 
Sbjct: 64  DLLIQSKSGTGKTLIYVLGAMNSYFP-AMRWPHALIVVPTRELAIQVEDTFFYLSYYMQG 122

Query: 120 LHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
                FIGGT V + ++ +   ++++G+PGR+  +   +  ++  +RL ++DEAD+L  T
Sbjct: 123 FRAHAFIGGTDVTKDRKRMSESRVIIGTPGRLLHLYHNRVFDVTKIRLLVLDEADQLFVT 182

Query: 177 -GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQL 235
            G  + +T + + LP  +Q++  SATY ++    L K M  P+LI   +    LLG++Q 
Sbjct: 183 KGLQDTVTELINVLPERRQVIACSATYENNLDERLAKMMRKPVLISNSERATVLLGIRQF 242

Query: 236 VALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
           V  +P+  N       + + ++++ +Q P+ Q ++F++ Q+R +     L  +      L
Sbjct: 243 VYDVPQQINSIQEMRCKLEAVLKIFAQLPYEQVILFASTQMRADSYRNYLMKSGIQCSLL 302

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
           +GA DQ  RL   +S++   +R LV TD+ ARG+D+ + +LVINL+ P D  TYLHR+GR
Sbjct: 303 TGAMDQADRLDVFESYRSFNMRTLVATDVMARGVDSKHANLVINLDPPKDHVTYLHRIGR 362

Query: 356 AGRYGTRGLVITIVSAESLVKFHSLMG 382
           AGR+G++G+ IT V+ +    F+ ++ 
Sbjct: 363 AGRFGSQGIAITFVTPKESETFNKILS 389


>gi|268638076|ref|XP_642653.2| hypothetical protein DDB_G0277527 [Dictyostelium discoideum AX4]
 gi|182641967|sp|Q54ZI9.2|DDX20_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx20; AltName:
           Full=DEAD box protein 20
 gi|256012996|gb|EAL68726.2| hypothetical protein DDB_G0277527 [Dictyostelium discoideum AX4]
          Length = 849

 Score =  244 bits (623), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/433 (34%), Positives = 234/433 (54%), Gaps = 70/433 (16%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT D+    ++ F +++L++K + +GL++ G+ + SPIQ+ A P  ++G D I Q+KSGT
Sbjct: 45  RTNDIEIEDNITF-SELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGT 103

Query: 70  GKSIVFVVAAL--------------------------NKLIKL-----------PVQQPQ 92
           GK+IVF V AL                           +L+++            +++P 
Sbjct: 104 GKTIVFGVIALECVLRESKLLRQKQELNKTQLTNQTNKQLLEMDDDTYVETMVGIIRKPL 163

Query: 93  TIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP--------------- 137
            +I+APTREIAVQI DV++S+  + K +  + FIGG      K                 
Sbjct: 164 VLIIAPTREIAVQIKDVIKSISKYCKRIKCEVFIGGLNSNNNKDENNNNILNNEDVNRLN 223

Query: 138 -VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMK--- 193
             QI+VG+PG+IK +I+  +L  D++++ IMDEADKL++  F + I WIYS +       
Sbjct: 224 GTQIIVGTPGKIKSLIENLHLRTDTLKMVIMDEADKLLDASFSKTINWIYSAIGNGNSNK 283

Query: 194 ---------QMLVVSATYSHDNLATLQKYMVDPLL--IRPEDATRPLLGVKQLVALIPE- 241
                    QML  SATY    +  L+ YM +  L  IR    T  L G+KQ   +    
Sbjct: 284 NNSSSGSGIQMLAFSATYPSYLINLLKLYMNNENLVEIRLCSDTPSLEGIKQYYQIFRND 343

Query: 242 -CKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQD 300
             +N    + ++ K LV +L Q  F Q +IF N+++R E +   L    +   +++G Q+
Sbjct: 344 FTENNYKTFQNKCKSLVLVLEQVSFYQAIIFCNHKIRGEELTRQLNREGWPTAFIAGGQN 403

Query: 301 QKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYG 360
           QK RL+++ + K   +RILV+TDL +RGID   V+LVINL++P D  TY HR+GR GR+G
Sbjct: 404 QKDRLSTMSALKSFNIRILVSTDLISRGIDVERVNLVINLDLPKDHETYFHRIGRTGRFG 463

Query: 361 TRGLVITIVSAES 373
           T G+ IT ++ +S
Sbjct: 464 TYGVSITFINMKS 476


>gi|194868374|ref|XP_001972279.1| GG13972 [Drosophila erecta]
 gi|190654062|gb|EDV51305.1| GG13972 [Drosophila erecta]
          Length = 1079

 Score =  243 bits (620), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 216/367 (58%), Gaps = 6/367 (1%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           R+ DV       FE ++ + + +  GL+ + FV  + IQ AA P  L   D I+QSKSGT
Sbjct: 15  RSSDVAPGQVKTFE-ELRLSRNLLHGLKRHNFVTPTKIQAAAIPMALANMDLIIQSKSGT 73

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK++++V+AA+       + +P T+I+ PTRE+A+Q+ D    +    ++     FIGGT
Sbjct: 74  GKTLIYVIAAMQGY-HPRMTRPHTLIVVPTRELAIQVEDTFFYLCESFRDFKCAAFIGGT 132

Query: 130 QVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVED-ITWI 185
            V + +R +Q   +++G+PGR+  + + + L++  + L ++DEAD+L  T  ++D ++ +
Sbjct: 133 DVSKDRRRMQASRVIIGTPGRLLHLYQNRVLDVSKLGLLVLDEADQLYQTKSLQDTVSKL 192

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q++  SATY  D    L K M  P+LI   +    LLG++Q V  +P+  N 
Sbjct: 193 IEALPKNRQIIACSATYDQDLDERLAKIMHKPMLISNSERATVLLGIRQFVYELPQQTNS 252

Query: 246 SLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
                 + + L Q+ +Q P+ Q VIF++ Q+R +     L  +      +SGA DQ  RL
Sbjct: 253 VEEMRLKLQVLGQIFNQLPYEQAVIFASSQMRADSYKNYLTASGVECHLISGAMDQSERL 312

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
              + ++   +RILV TDL ARG+D+ + +LVIN++ P D  TYLHR+GRAGR+G++G+ 
Sbjct: 313 NVFEGYRNFTMRILVATDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIA 372

Query: 366 ITIVSAE 372
           IT ++++
Sbjct: 373 ITFIASK 379


>gi|328874158|gb|EGG22524.1| putative RNA helicase [Dictyostelium fasciculatum]
          Length = 850

 Score =  243 bits (619), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/427 (34%), Positives = 235/427 (55%), Gaps = 59/427 (13%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RTKDV+   D+ F +++ +   + + L+  GF K SP+Q+ A P  ++G D + Q+KSGT
Sbjct: 66  RTKDVMIEKDIGF-SELNLPSVLVEALKSCGFEKPSPVQVQAIPIGVSGVDMVAQAKSGT 124

Query: 70  GKSIVFVVAALNKLIKLPVQ----------------------------QPQTIILAPTRE 101
           GK++VF   A+ ++++   Q                            +   ++LAPTRE
Sbjct: 125 GKTVVFGSIAIERVLRHCTQPTASTLSKKQLLDMDDDSYAEAVSGVPRRTLVLMLAPTRE 184

Query: 102 IAVQITDVVRSVGAHV-KNLHVDYFIGG----TQVERPKRP-VQIVVGSPGRIKQMIKLK 155
           IA+QI  VV  +  H  K LHV+ F+GG    TQ +  K    Q+VVG+PGRI+ +I+ +
Sbjct: 185 IAIQIASVVGEIAKHAGKRLHVEAFVGGNASTTQEDEIKLGGAQVVVGTPGRIRSLIEAR 244

Query: 156 YLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMV 215
            L  D + LFIMDEADKL++  F +D  WI++ LP  +Q+   SAT+    L  +++YM 
Sbjct: 245 RLRTDDIELFIMDEADKLLDAAFSKDFNWIFTSLPKKRQIAAFSATFPTALLNMVERYMS 304

Query: 216 DPL---LIRPEDATRPLLGVKQLVALIPECKN---------------PSLRYVDEEKK-- 255
           +P+   + + E+    L G+KQ   +I +  N                ++ Y     K  
Sbjct: 305 NPVHVQMCKGEEGVS-LEGIKQYYQIIKDTNNTTNNTNNTSSTSIPISTIEYHTFRAKVN 363

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L+ LL Q  F Q V+F N ++R E +C+ L    +   Y++G+ +Q  R+A +   +  
Sbjct: 364 SLLILLEQVSFYQAVVFCNNRVRAEELCKLLCKEGWPTRYIAGSMEQIERMAVMKELQAF 423

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIP--HDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           K+RILV+TDL +RGID   V+LV+N+E+P   D  TY HR+GR GR+G+ G+ IT VS +
Sbjct: 424 KLRILVSTDLISRGIDIERVNLVVNMEVPVAMDFETYFHRIGRTGRFGSYGVSITYVSGD 483

Query: 373 SLVKFHS 379
             ++F S
Sbjct: 484 REMQFIS 490


>gi|198465797|ref|XP_002135041.1| GA23460 [Drosophila pseudoobscura pseudoobscura]
 gi|198150317|gb|EDY73668.1| GA23460 [Drosophila pseudoobscura pseudoobscura]
          Length = 825

 Score =  242 bits (618), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/348 (36%), Positives = 205/348 (58%), Gaps = 5/348 (1%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +GL    F   + IQ AA P  L G D +VQSKSGTGK++++VV AL ++  L 
Sbjct: 32  LRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLLVQSKSGTGKTLIYVVTAL-QMCSLS 90

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK---RPVQIVVGS 144
            Q P+ +++ PTRE+A+Q+ D+ R +G  +++  V  F+GGT V R +   R   + +G+
Sbjct: 91  TQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVSSFMGGTDVTRDREKLRNCHVAIGT 150

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVE-DITWIYSQLPPMKQMLVVSATYS 203
           PGR+ Q+ +   LNM  V+L ++DEAD+L  T  ++  +  + + LP  +Q++  SAT+ 
Sbjct: 151 PGRLLQLHEKGVLNMSMVKLLVLDEADQLYVTASLQKTVNALIAVLPLQRQVIACSATFD 210

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
            +    + K M  P+LI   +    LLG++Q V  +PE  N  L    + + L ++ +Q 
Sbjct: 211 QNLDEKIAKMMEKPVLISNSERATVLLGIRQFVYELPEQVNNLLEMRLKLEALKKIFAQL 270

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
            + Q V+FSN ++R +  C  L         LSG   Q+ R    + ++   VR +V TD
Sbjct: 271 NYEQAVLFSNSKMRADSYCSYLNAGKIPCALLSGDLAQEDRSKVFEGYRNFSVRTIVATD 330

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           L ARG+D+ + +LVINL+ P D  TYLHR+GRAGR+G++ + IT +S+
Sbjct: 331 LIARGVDSHHANLVINLDPPTDHITYLHRIGRAGRFGSKAIAITFISS 378


>gi|17647335|ref|NP_524019.1| Gemin3, isoform A [Drosophila melanogaster]
 gi|442631541|ref|NP_001261678.1| Gemin3, isoform B [Drosophila melanogaster]
 gi|5679086|gb|AAD46851.1|AF160911_1 BcDNA.LD05563 [Drosophila melanogaster]
 gi|7294824|gb|AAF50157.1| Gemin3, isoform A [Drosophila melanogaster]
 gi|440215599|gb|AGB94372.1| Gemin3, isoform B [Drosophila melanogaster]
          Length = 1028

 Score =  238 bits (607), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 202/342 (59%), Gaps = 5/342 (1%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
           GL+ N FV  + IQ AA P  L   D I+QSKSGTGK++++V+A +       + QP  +
Sbjct: 39  GLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQSF-NPNINQPHAM 97

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQM 151
           I+ PTRE+A+Q+ D    +    ++     FIGGT V + ++ +   ++++G+PGR+  +
Sbjct: 98  IVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNESRVIIGTPGRLLHL 157

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVE-DITWIYSQLPPMKQMLVVSATYSHDNLATL 210
            + +  ++  +RL ++DEAD+L  T  ++  ++ +   +P  +Q++  SATY  +    L
Sbjct: 158 YENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQNLDERL 217

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            K M  P+LI   +    LLG++Q V  +P+  N       + + L Q+ +Q P+ Q +I
Sbjct: 218 AKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQLPYEQAII 277

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F++ Q+R +     L  +      +SGA +Q  RL   + ++   +RILV TDL ARG+D
Sbjct: 278 FASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVD 337

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           + + +LVIN++ P D  TYLHR+GRAGR+G++G+ IT ++++
Sbjct: 338 SPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASK 379


>gi|195589286|ref|XP_002084383.1| GD12861 [Drosophila simulans]
 gi|194196392|gb|EDX09968.1| GD12861 [Drosophila simulans]
          Length = 690

 Score =  237 bits (604), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 120/342 (35%), Positives = 204/342 (59%), Gaps = 5/342 (1%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
           GL+ N FV  + IQ AA P  L   D I+QSKSGTGK++++V+A +    +  + +P  +
Sbjct: 39  GLKRNNFVTPTKIQAAAIPMALANMDLIIQSKSGTGKTLIYVIAVVQSF-QPNMNRPHAM 97

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQM 151
           I+ PTRE+A+Q+ D    +    ++     FIGGT+V + +  +   ++++G+PGR+  +
Sbjct: 98  IVVPTRELAIQVQDTFVQLCKSFRDFKCSAFIGGTEVAKDRSRMNESRVIIGTPGRLLHL 157

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVE-DITWIYSQLPPMKQMLVVSATYSHDNLATL 210
            + + L++  +RL ++DEAD+L  T  ++  ++ +   +P  +Q++  SATY  D    L
Sbjct: 158 YENRVLDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDQDLDERL 217

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            K M  P+LI   +    LLG++Q V  +P+  N       + + L Q+ SQ P+ Q +I
Sbjct: 218 AKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFSQLPYEQAII 277

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F++ Q+R +     L  +      +SGA +Q  RL   + ++   +RILV TDL ARG+D
Sbjct: 278 FASSQMRADSYKNYLTASGVDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVD 337

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           + + +LVIN++ P D  TYLHR+GRAGR+G++G+ IT +S++
Sbjct: 338 SPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFISSK 379


>gi|195378138|ref|XP_002047841.1| GJ11703 [Drosophila virilis]
 gi|194154999|gb|EDW70183.1| GJ11703 [Drosophila virilis]
          Length = 1068

 Score =  236 bits (603), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/393 (36%), Positives = 234/393 (59%), Gaps = 14/393 (3%)

Query: 1   MAHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGY 59
           +AHD++    RT DV +   V FE ++ + K + + L+ + F+  + IQ AA P  + G 
Sbjct: 5   LAHDLENTEQRTSDVAAG-SVSFE-ELNLNKNLTKCLKSHKFLTPTKIQAAAIPIAIAGM 62

Query: 60  DAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKN 119
           D +VQSKSGTGK++++V+AAL K+ K  V  PQ +I+ PTRE+A+Q+ D V  +   ++N
Sbjct: 63  DLLVQSKSGTGKTLIYVLAALQKMDK-SVPNPQALIIVPTRELAIQVEDTVNGLANKLRN 121

Query: 120 ----LHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
               L V  FIGGT V+R +  +   +IVVG+PGR+  +++ K  N  +++L ++DEAD+
Sbjct: 122 KNAYLGVS-FIGGTDVKRDRMRMARGRIVVGTPGRLIHLMQNKVFNTSAIKLLVLDEADQ 180

Query: 173 LINT-GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLG 231
           L +T    +D+  I + L P  Q++  SATY       L K M  P+L+   +    LLG
Sbjct: 181 LYSTDSLQKDVQTILASLQPGSQIIACSATYPDALDERLAKLMNKPVLVSNSERATVLLG 240

Query: 232 VKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFG 291
           V+Q V  +PE  N     + +   L ++ +Q  + Q ++F++ Q R +     L      
Sbjct: 241 VRQFVYELPEQANSMQEMMAKLAALHKIFAQLSYEQAILFASSQSRADSFRNYLQRDGVE 300

Query: 292 AEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLH 351
            + +SGA  Q  RL +  +++  K+R +V TDL ARG+D+++ +LVINL+ P+D  TYLH
Sbjct: 301 CDLMSGAMKQSDRLETFQAYRSFKMRTIVATDLMARGVDSSHANLVINLDPPNDLVTYLH 360

Query: 352 RMGRAGRYGTRGLVITIVSA-ESLVKFHSLMGE 383
           R+GRAGR+G +G+ IT +S+ +  V F  ++ +
Sbjct: 361 RIGRAGRFGAKGIAITFISSPQQCVSFKRIIAD 393


>gi|170588285|ref|XP_001898904.1| DEAD/DEAH box helicase family protein [Brugia malayi]
 gi|158593117|gb|EDP31712.1| DEAD/DEAH box helicase family protein [Brugia malayi]
          Length = 726

 Score =  236 bits (602), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/392 (36%), Positives = 223/392 (56%), Gaps = 38/392 (9%)

Query: 13  DVLSNIDVLFENDV------LIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSK 66
           +V+  IDV  E DV      ++ +     L + GF+K SP+Q  A P+ + G D +VQ+K
Sbjct: 32  EVVRTIDV--ETDVPDFSSLMLNRTSLNALAKAGFIKPSPVQAQAIPFGMLGLDLLVQAK 89

Query: 67  SGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFI 126
           SGTGK++VF + A+  L      +PQ +I+APTREIA QI   +R +   V  +HV  F+
Sbjct: 90  SGTGKTMVFSLLAVENL-NAQFGRPQVLIVAPTREIASQIVSYIRMLAPSV--IHVGMFV 146

Query: 127 GGTQ------VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVE 180
           GG +      +++ ++ + IVVG+ GR+  ++++  L +  VRLF++DEADKL+   F +
Sbjct: 147 GGNEKGVAEDIQKLRKSIHIVVGTTGRLCHLVRINALRLSHVRLFVLDEADKLMEDSFQK 206

Query: 181 DITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIP 240
           +I +++S LPP KQ+ V SATY +    TL  YM D  L+R  D    LLGVKQ V +  
Sbjct: 207 EINYLFSTLPPEKQIAVFSATYPYRLDTTLMHYMRDVHLVRV-DKDAQLLGVKQYVIV-- 263

Query: 241 ECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFS-------------NYQLRPEVICENLAN 287
             +N +     +   L++LL    + QC++                   R E +C +L  
Sbjct: 264 -ARNGT----RKMNVLLRLLVHLRYGQCILICLLVAFKKEKIAALKLYFRCEELCADLQR 318

Query: 288 ANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAA 347
           A F A  +SG+  Q  R  ++   K   V++L++TDL ARGIDA  V++V+N   P   A
Sbjct: 319 AKFDAVSISGSMPQTDRTKAIRRLKNCLVKLLISTDLTARGIDAPGVNIVVNYGSPLILA 378

Query: 348 TYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           TYLHR+GRAGR+GT+G   TI++++  +K  S
Sbjct: 379 TYLHRIGRAGRFGTQGAAFTIINSDKELKLFS 410


>gi|195326563|ref|XP_002029995.1| GM24810 [Drosophila sechellia]
 gi|194118938|gb|EDW40981.1| GM24810 [Drosophila sechellia]
          Length = 854

 Score =  236 bits (601), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/342 (34%), Positives = 204/342 (59%), Gaps = 5/342 (1%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
           GL+ N FV  + IQ AA P  L   D I+QSKSGTGK++++++A +    +  + +P  +
Sbjct: 39  GLKRNNFVTPTKIQAAAIPMALANIDLIIQSKSGTGKTLIYIIAVVQSF-QPNMNRPHAM 97

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV---QIVVGSPGRIKQM 151
           ++ PTRE+A+Q+ D    +    ++     FIGGT+V + +  +   ++++G+PGR+  +
Sbjct: 98  VIVPTRELAIQVQDTFVQLCKSFRDFKCSAFIGGTEVAKDRSRMNESRVIIGTPGRLLHL 157

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVE-DITWIYSQLPPMKQMLVVSATYSHDNLATL 210
            + + L++  +RL ++DEAD+L  T  ++  ++ +   +P  +Q++  SATY  D    L
Sbjct: 158 YENRVLDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATYDKDLDERL 217

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            K M  P+LI   +    LLG++Q V  +P+  N       + + L Q+ SQ P+ Q +I
Sbjct: 218 AKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFSQLPYEQAII 277

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F++ Q+R +     L  +      +SGA +Q  RL   + ++   +RILV TDL ARG+D
Sbjct: 278 FASSQMRADSYKNYLTASGVDCHLISGAMEQSERLHVFEGYRNFTMRILVATDLMARGVD 337

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           + + +LVIN++ P D  TYLHR+GRAGR+G++G+ IT +S++
Sbjct: 338 SPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFISSK 379


>gi|440793334|gb|ELR14521.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 470

 Score =  234 bits (598), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 135/358 (37%), Positives = 218/358 (60%), Gaps = 5/358 (1%)

Query: 26  VLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK 85
           +L+   + +GL + G+++ SPIQ+ A P    G D I Q++SGTGK+ VF V A+ + + 
Sbjct: 47  LLLSPAVVRGLTQAGYLRPSPIQLRAIPIARCGVDVIGQAQSGTGKTCVFGVVAV-EAVS 105

Query: 86  LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT--QVERPK-RPVQIVV 142
             +   Q ++LAPTREIA+Q   VVR++G +VK L  + F+GGT   ++ P+ R   I V
Sbjct: 106 ADLPALQALLLAPTREIALQTLAVVRALGKYVKGLRCEAFVGGTPQALDPPRLRATHIAV 165

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
            +PGR + ++    +    VR+ ++DEADKL++T   E    I   LP  KQ+L  SATY
Sbjct: 166 ATPGRARALLA-DGVEAQRVRVVVLDEADKLLDTNLREQTLDILGVLPQAKQVLAFSATY 224

Query: 203 SHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQ 262
             D L TL   M  P  I     T  +  ++Q  A++P    P + + ++ K L+ L  +
Sbjct: 225 RADLLDTLHGLMRSPQHIILSTDTLTVKDIRQYYAVVPGKGTPFMVFNEKAKTLMNLFDK 284

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
            PF Q ++F+N + R + + + L++  + A +L+GAQ Q  R  ++ +F+  K+RILV+T
Sbjct: 285 LPFQQALVFTNDKARGQQLADRLSDRGWPAAFLAGAQLQHIRAHTMAAFREVKLRILVST 344

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           DL ARG+D   ++LV+NL++P+DA TYLHR+GR GR+G +G+ +T+V+ +   +  SL
Sbjct: 345 DLVARGVDVERINLVVNLDVPYDAETYLHRVGRTGRFGAQGVAVTLVTEKERPELLSL 402


>gi|440798314|gb|ELR19382.1| DEAD/DEAH box helicase/helicase conserved Cterminal domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 369

 Score =  234 bits (596), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 132/354 (37%), Positives = 202/354 (57%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++P+ +G+   GF K S IQ  A   V+ G D I Q++SGTGK+  F ++AL + I   
Sbjct: 3   LKEPLLRGIYGFGFEKPSAIQQRAIGQVIKGRDVIAQAQSGTGKTATFSISALQR-IDTT 61

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
            ++PQ +IL+PTRE+A QI  VV S+G+ + N+     IGGT +    R +    QIV G
Sbjct: 62  SKEPQALILSPTRELASQIQKVVYSLGSFM-NVKCHVCIGGTNIGEDTRKLEAGAQIVSG 120

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   S+++ I+DEAD++++ GF E I  +Y  LPP  Q+++VSAT  
Sbjct: 121 TPGRVFDMIRRRSLRTRSIKMLILDEADEMLSRGFKEQIYDVYRHLPPATQVVLVSATLP 180

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 181 HEVLEMTTKFMNDPIRILVKRDELTLEGIKQFFVAVEK----------EEWKFETLCDLY 230

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +   NF    + GA +Q  R   +  F+ G  R+L+
Sbjct: 231 DTLTITQAVIFCNTRRKVDWLTEKMRKVNFTVVAMHGAMEQSERDEIMTQFRAGDARVLI 290

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID + V LVIN ++P+D   YLHR+GR+GR+G +G+ I  V  + +
Sbjct: 291 TTDIWARGIDVSQVSLVINYDLPNDRELYLHRIGRSGRFGRKGVAINFVKNDDI 344


>gi|26341624|dbj|BAC34474.1| unnamed protein product [Mus musculus]
          Length = 354

 Score =  229 bits (583), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 132/301 (43%), Positives = 181/301 (60%), Gaps = 7/301 (2%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DV+      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 44  AHDIGGPRTRTGDVVLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 102

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLI-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGL 161

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 162 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 222 SFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281

Query: 237 ALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
            ++         + ++ + L +L S+ PFNQ ++FSN   R + + + L++  F  E +S
Sbjct: 282 QVVNSYPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECIS 341

Query: 297 G 297
           G
Sbjct: 342 G 342


>gi|393910885|gb|EJD76077.1| DEAD/DEAH box helicase [Loa loa]
          Length = 789

 Score =  228 bits (582), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/385 (37%), Positives = 217/385 (56%), Gaps = 36/385 (9%)

Query: 4   DIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIV 63
           D+ +  RT DV    DV   + +++ +     L + GF K SP+Q  A P  + G D +V
Sbjct: 2   DMSEVIRTMDV--ETDVPDFSSLMLNRTSLNALAKAGFTKPSPVQARAIPSGMLGLDLLV 59

Query: 64  QSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVD 123
           Q+KSGTGK++VF + A+  L      +PQ +I+APTREIA QI   +R +   V    + 
Sbjct: 60  QAKSGTGKTMVFSLLAVENL-NAQFGRPQVLIVAPTREIASQIVSYIRMLAPVVV---IR 115

Query: 124 YFIGGTQ------VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            F+GG +      +++ K+ + IVVG+ GR+  ++++  L +  VRLF++DEADKL+   
Sbjct: 116 MFVGGNEKGVAEDIQKLKKSIHIVVGTTGRLCHLVRINALRLSHVRLFVLDEADKLMEDN 175

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F ++I +++S LPP KQ+ V SATY +    TL +YM D  L+R  D    LLGVKQ V 
Sbjct: 176 FQKEINYLFSALPPEKQVAVFSATYPYRLDTTLTRYMRDVHLVRV-DRDAQLLGVKQYVI 234

Query: 238 LIPECKNPSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
           +            D  +K+   ++LL +  + QC            +C +L  + F A  
Sbjct: 235 VAR----------DGTRKMNILLRLLLRLRYGQC----------NELCADLHRSRFDAVS 274

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG   Q  R  ++   K   V++LV+TDL ARGIDA  V++VIN   P   ATYLHR+G
Sbjct: 275 ISGNMPQIDRTKAIRRLKNCMVKLLVSTDLTARGIDAPGVNIVINYGSPLVLATYLHRIG 334

Query: 355 RAGRYGTRGLVITIVSAESLVKFHS 379
           RAGR+GT+G   TI+S++  +K  S
Sbjct: 335 RAGRFGTQGAAFTIISSDQELKLFS 359


>gi|170056247|ref|XP_001863944.1| DEAD-box ATP-dependent RNA helicase 8 [Culex quinquefasciatus]
 gi|167876013|gb|EDS39396.1| DEAD-box ATP-dependent RNA helicase 8 [Culex quinquefasciatus]
          Length = 369

 Score =  228 bits (582), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/362 (38%), Positives = 208/362 (57%), Gaps = 9/362 (2%)

Query: 3   HDIQ-KCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           H++Q +  RT+DV  +  + FE   L E  +R GL  N FV  SPIQ  A P    G D 
Sbjct: 4   HNLQDERVRTEDVEFDRSLRFEQMFLSEAVVR-GLSRNNFVMPSPIQARAIPLGKLGLDL 62

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLP-VQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
           +VQ+KSGTGK++VF V  L      P V  PQ++++ PTREIAVQI  V+  +   + N 
Sbjct: 63  LVQAKSGTGKTLVFSVLILEG--HNPDVPFPQSLVVVPTREIAVQIEQVLNRIAYSMANF 120

Query: 121 HVDYFIGGTQVERPKRPVQ---IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGG  + + ++ +Q    VVG+PGRI  +IK   LNM  +++ ++DEAD LI   
Sbjct: 121 RAKSFIGGLDIVQDRKNLQNCTAVVGTPGRIWHLIKSGVLNMSHIKMLVLDEADSLIAGT 180

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLL-IRPEDATRPLLGVKQLV 236
              D+  I   +P  +Q LV SAT+  +    L KYM +  + + P+     L G++Q V
Sbjct: 181 LQSDVDQIIKAVPKKRQTLVCSATFYKNRDRELLKYMKEQFIGVTPKKEVPVLHGIRQFV 240

Query: 237 ALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
             +PE K+     + +  +L  +  + PF+QC++F+N Q + E     L    +  E + 
Sbjct: 241 RELPEAKDNIKEMMAKIHELDSIFKKLPFSQCLLFTNSQTKAESYSSQLTRIGWPTEVIR 300

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G Q+Q+ RL ++++ K+ + RIL  TD+ ARGIDA NV+LVIN+++P D   YLHR+GR 
Sbjct: 301 GGQEQRVRLKTVENLKQFRCRILSATDVIARGIDAENVNLVINVDVPVDNMVYLHRIGRG 360

Query: 357 GR 358
           GR
Sbjct: 361 GR 362


>gi|392573430|gb|EIW66570.1| hypothetical protein TREMEDRAFT_57751 [Tremella mesenterica DSM
           1558]
          Length = 395

 Score =  228 bits (582), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 136/380 (35%), Positives = 213/380 (56%), Gaps = 23/380 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F +A L   I   
Sbjct: 29  LKEDLLRGIYAYNFEKPSAIQQRAIIPIMRGRDVIAQAQSGTGKTATFSIAILQS-IDSN 87

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+AVQI  VV ++G ++ N+     IGGT V    R +    Q+V G
Sbjct: 88  IRESQALVLSPTRELAVQIQTVVLALGDYM-NVSCHACIGGTSVGEDIRKLEAGQQVVSG 146

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ I+DEAD+L+N GF + I  IY  LPP  Q++VVSAT  
Sbjct: 147 TPGRVFDMIRRRNLRTKDIKMLILDEADELLNKGFKDQIYDIYRYLPPATQVVVVSATLP 206

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL---VQLL 260
           HD L    K+M DP+ I  +     L G+KQ    + +          EE KL   + L 
Sbjct: 207 HDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EEWKLDTLMDLY 256

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q V+F N + + + + E +  ANF    + G   QK R A +  F+ G+ R+L+
Sbjct: 257 DTLTITQAVLFCNTKRKVDWLTEKMREANFTVSSMHGDMVQKERDAIMAEFRSGQSRVLI 316

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           TTD+ ARGID   V LVIN ++P +   YLHR+GR+GR+G +G+ I  V+ E +    S+
Sbjct: 317 TTDVWARGIDVQQVSLVINYDLPSNRENYLHRIGRSGRFGRKGVAINFVTTEDV----SI 372

Query: 381 MGEINLDHAFNVGLVPDNLT 400
           + +I   ++  +  +P N+T
Sbjct: 373 LRDIEQFYSTQIDEMPMNIT 392


>gi|392902146|ref|NP_001255908.1| Protein MEL-46, isoform b [Caenorhabditis elegans]
 gi|392902148|ref|NP_001255909.1| Protein MEL-46, isoform a [Caenorhabditis elegans]
 gi|154147106|emb|CAM36366.2| Protein MEL-46, isoform a [Caenorhabditis elegans]
 gi|154756880|gb|ABS85191.1| MEL-46 [Caenorhabditis elegans]
 gi|371570837|emb|CCF23356.1| Protein MEL-46, isoform b [Caenorhabditis elegans]
          Length = 973

 Score =  225 bits (574), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/407 (36%), Positives = 230/407 (56%), Gaps = 32/407 (7%)

Query: 16  SNIDV----LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGK 71
           S+IDV     FE+ ++ +K + + L+ + F + SP+Q  A P  L G D +VQ+KSGTGK
Sbjct: 14  SSIDVQSNCTFESLMIGQKTLER-LKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGK 72

Query: 72  SIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV 131
           ++VF V A+  L        Q +I+ PTREI+VQI + VR V           ++GG+  
Sbjct: 73  TLVFSVLAVENLDSRS-SHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129

Query: 132 E------RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
           +      +  RP QIV+G+PGRI Q++KL  +NM  V  F++DEADKL++  F +DI  I
Sbjct: 130 KLNLIDLKQTRP-QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINII 188

Query: 186 YSQLPPMKQMLVVSATYSH--DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECK 243
            + LP ++Q+ V SATY    DNL  L  ++ D  L+R       L G+KQ V  + +C 
Sbjct: 189 INSLPQIRQVAVFSATYPRNLDNL--LSTFLRDAALVRFNADDVQLFGIKQYV--VAKC- 243

Query: 244 NPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
           +P L      +KL  +L    + Q ++F +   + E I  +L ++     ++S A  QK 
Sbjct: 244 SPML------EKLTHVLKSIRYVQALVFCDQISKCEPIATHLKSSGLDVTFVSSAMSQKD 297

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R  ++D  +  +V+ILV++DL ARGIDA NV+LV+N++   +  TY HR+GRA R+G  G
Sbjct: 298 RQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAARFGAHG 357

Query: 364 LVITIVSAESLVK-FHSLM--GEINLDHAFN-VGLVPDNLTGDQINW 406
             +T++  E  +K F +L   G++ +      V  +P +L  +Q  W
Sbjct: 358 AAVTLLEDERALKGFTALAYRGKVTVKRVVEGVHELPGDLVKNQEFW 404


>gi|340959742|gb|EGS20923.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
           var. thermophilum DSM 1495]
          Length = 400

 Score =  224 bits (570), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 136/385 (35%), Positives = 215/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S IQ  A   +  G D I Q++SGTGK+  F +A L 
Sbjct: 28  FESMNLKESLLR-GIYAYGYESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFSIAML- 85

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI +VV ++G ++ N+     IGGT V    R +   
Sbjct: 86  QVIDTAVRETQALVLSPTRELATQIQNVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 144

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 145 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVV 204

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 205 VSATLPYDVLEMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 254

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E +  ANF    + G   QK R A +  F++G
Sbjct: 255 TLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMQDFRQG 314

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 315 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 374

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 375 ----RILRDIELYYSTQIDEMPMNV 395


>gi|308467858|ref|XP_003096174.1| CRE-MEL-46 protein [Caenorhabditis remanei]
 gi|308243459|gb|EFO87411.1| CRE-MEL-46 protein [Caenorhabditis remanei]
          Length = 972

 Score =  224 bits (570), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 142/406 (34%), Positives = 227/406 (55%), Gaps = 29/406 (7%)

Query: 16  SNIDV----LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGK 71
           S+IDV     FE+ ++ +K + + L+   F + SP+Q  A P  L G D +VQ+KSGTGK
Sbjct: 14  SSIDVQSKHTFESLMIGQKTLER-LKAAQFDRPSPVQAKAIPVGLLGRDMLVQAKSGTGK 72

Query: 72  SIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT-- 129
           ++VF V A+  L  L     Q I++ PTREI+ QI + +R V        V  ++GG   
Sbjct: 73  TLVFSVLAVENL-DLRASYVQKIVITPTREISTQIKETMRKVAPPGARTSV--YVGGCGH 129

Query: 130 ---QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
               ++  K   QIV+G+PGRI Q++KL  +++  V  F++DEADKL++  F +DI  I 
Sbjct: 130 KLNMIDLKKTRPQIVIGTPGRIAQLLKLGAMDLSHVDFFVLDEADKLMDDVFRDDINIII 189

Query: 187 SQLPPMKQMLVVSATYSH--DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKN 244
           + LPP++Q+ V SATY    DNL  L  ++ D  L+R       L+G+KQ V  + +C +
Sbjct: 190 NSLPPIRQVAVFSATYPRNLDNL--LSTFLRDAALVRFNADDVQLIGIKQYV--VTKC-S 244

Query: 245 PSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKAR 304
           P L      +KL  +L    + Q ++F +   + E I  +L +      ++S A  QK R
Sbjct: 245 PML------EKLTHVLKSIRYVQALVFCDQIAKCEPIASHLKSEGLDVTFVSSAMSQKDR 298

Query: 305 LASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGL 364
             ++D  +  +V+ILV++DL ARGIDA NV+LV+N++   +  TY HR+GRA R+G  G 
Sbjct: 299 QLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNVDAAANEETYFHRIGRAARFGAHGA 358

Query: 365 VITIVSAESLVKFHSLM---GEINLDHAFNVGLVPDNLTGDQINWT 407
            +T++  E  +K  + +   G++ +     V  +P +L  +   W 
Sbjct: 359 AVTLLEDEKALKCFTALAYRGKVTVKRVARVENLPSDLAKNVEFWM 404


>gi|164655646|ref|XP_001728952.1| hypothetical protein MGL_3946 [Malassezia globosa CBS 7966]
 gi|159102840|gb|EDP41738.1| hypothetical protein MGL_3946 [Malassezia globosa CBS 7966]
          Length = 396

 Score =  224 bits (570), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 128/348 (36%), Positives = 198/348 (56%), Gaps = 19/348 (5%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+    F K S IQ  A   +L G D I Q++SGTGK+  F +A L + I + +++ Q 
Sbjct: 36  RGIYAYNFEKPSAIQQRAILPILRGRDVIAQAQSGTGKTATFSIAML-QTIDISLRETQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGRIK 149
           ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R ++    IV G+PGR+ 
Sbjct: 95  LVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSVGEDIRKLEYGQHIVSGTPGRVF 153

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MI+ ++L   ++++ IMDE+D+L+N GF + I  IY  LPP  Q+++VSAT  HD L  
Sbjct: 154 DMIRRRHLRTKNIKMLIMDESDELLNMGFKDQIYDIYRYLPPATQVVLVSATLPHDVLEM 213

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFN 266
             K+M DP+ I  +     L G+KQ    + +          E+ K   L  L       
Sbjct: 214 TSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTLCDLYDTLTIT 263

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q VIF N + + + + + +   NF    + G   QK R A +  F++G  R+L+TTD+ A
Sbjct: 264 QAVIFCNTRRKVDWLTDRMRENNFQVSSMHGEMQQKERDAIMGEFRQGGSRVLITTDVWA 323

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           RGID  NV LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 324 RGIDVQNVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTTEDV 371


>gi|332810031|ref|XP_003308378.1| PREDICTED: probable ATP-dependent RNA helicase DDX20 [Pan
           troglodytes]
          Length = 668

 Score =  223 bits (568), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 161/257 (62%), Gaps = 8/257 (3%)

Query: 117 VKNLHVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKL 173
           ++ L    FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL
Sbjct: 1   MEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKL 60

Query: 174 INTG-FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           +  G F E I WIYS LP  KQML VSATY       L KYM DP  +R   +   L+G+
Sbjct: 61  LEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGL 120

Query: 233 KQLVALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
           KQ   ++     P    V EEK   L +L S+ PFNQ ++FSN   R + + + L++  F
Sbjct: 121 KQYYKVVN--SYPLAHKVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGF 178

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
            AE +SG  +Q  RL ++   K    R+L++TDL +RGIDA  V+LV+NL++P D  TY+
Sbjct: 179 PAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYM 238

Query: 351 HRMGRAGRYGTRGLVIT 367
           HR+GRAGR+GT GL +T
Sbjct: 239 HRIGRAGRFGTLGLTVT 255


>gi|320167743|gb|EFW44642.1| eIF4AIII protein [Capsaspora owczarzaki ATCC 30864]
          Length = 413

 Score =  223 bits (567), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 132/367 (35%), Positives = 205/367 (55%), Gaps = 20/367 (5%)

Query: 16  SNIDVLFENDVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIV 74
           S +D++ +   +  KP + QG+   GF + S IQ  A   +L G D I Q++SGTGK+  
Sbjct: 31  SGVDIVTDFAQMNLKPELLQGIYAYGFEQPSAIQQRAIRPILKGRDVIAQAQSGTGKTAT 90

Query: 75  FVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP 134
           F ++ALN  ++   ++ Q ++L+PTRE+A QI  VV ++G ++  +     IGG  V   
Sbjct: 91  FSISALN-CVEPATRETQALVLSPTRELAQQIQKVVLALGDYM-GVQCHACIGGVSVAED 148

Query: 135 KRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            + +     +V G+PGR+  MIK ++L   ++++ I+DEAD++++ GF E I  IY  LP
Sbjct: 149 IKKLDYGQHVVSGTPGRVFDMIKRRHLRTRNIKMLILDEADEMLSRGFKEQIYDIYRYLP 208

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
           P  Q+++VSAT  H+ L    K+M DP+ I  +     L G+KQ    +           
Sbjct: 209 PTTQVVIVSATLPHEVLEITTKFMTDPIRILVKRDELTLEGIKQFFISVER--------- 259

Query: 251 DEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLAS 307
            EE K   L  L       Q VIF N + + E + E +A ANF   ++ G  DQK R   
Sbjct: 260 -EEWKFDTLCDLYDTLIITQAVIFCNTRRKVEFLAEEMAKANFTVSHMHGEMDQKERDTI 318

Query: 308 LDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVIT 367
           +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G  G+ I 
Sbjct: 319 MKQFRSGATRVLITTDLWARGIDVQQVSLVINYDLPINRENYIHRIGRSGRFGRSGVAIN 378

Query: 368 IVSAESL 374
            V+ + +
Sbjct: 379 FVTNDDV 385


>gi|328873234|gb|EGG21601.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
           fasciculatum]
          Length = 418

 Score =  222 bits (566), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 136/391 (34%), Positives = 215/391 (54%), Gaps = 25/391 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F + AL 
Sbjct: 46  FESIHLREDLLR-GIYGFGFEKPSAIQQRAIVPIIKGRDTIAQAQSGTGKTATFSIGALQ 104

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG----GTQVERPKRP 137
             + + ++ PQ IIL+PTRE+A QI  VV ++G  + ++ V  F+G       V R ++ 
Sbjct: 105 S-VDVSIKNPQVIILSPTRELAQQIQKVVMALGGFM-SVQVHSFVGQKTISEDVRRLEQG 162

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V I  G+PGR+  +I  K LN   +++ I+DEAD++++ GF + I  +Y  LPP  Q+++
Sbjct: 163 VHIASGTPGRVIDLISRKALNTRQIKMLILDEADEMLSLGFQQQINDVYRYLPPATQIVL 222

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT + D ++  +++M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 223 VSATLTQDVVSMTERFMTDPVRILLKRDELTLEGIKQFFVSVEK----------EEWKFG 272

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  +       Q VIF N + + + +   +  ANF    L G  DQK R   + SF+ G
Sbjct: 273 TLCDIYDSLTITQAVIFCNTKSKVDALTNKMREANFTVASLHGDMDQKEREEIIRSFRSG 332

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           + R+L+TTD+ ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G+ I  V +  +
Sbjct: 333 ENRVLITTDILARGIDVQQVSLVINYDLPMDRENYIHRIGRSGRFGRKGVAINFVKSSDI 392

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNLTGDQIN 405
                ++ +I   ++  +  +P N   D IN
Sbjct: 393 ----RILRDIEQFYSTQIDEMPMNF-ADSIN 418


>gi|221059063|ref|XP_002260177.1| RNA helicase [Plasmodium knowlesi strain H]
 gi|193810250|emb|CAQ41444.1| RNA helicase, putative [Plasmodium knowlesi strain H]
          Length = 398

 Score =  222 bits (566), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 133/372 (35%), Positives = 212/372 (56%), Gaps = 34/372 (9%)

Query: 11  TKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           T++++   D L  N+ L+     +G+   GF K S IQ      +LNGYD I Q++SGTG
Sbjct: 18  TEEIVDTFDALGLNEKLL-----RGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTG 72

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT- 129
           K+  FV+++L +LI   V   Q +ILAPTRE+A QI  VV ++G ++K +     +GGT 
Sbjct: 73  KTATFVISSL-QLINYDVVACQALILAPTRELAQQIQKVVLALGDYLK-VKCHACVGGTV 130

Query: 130 ---QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
               +++ K+ V +VVG+PGR+  MI  ++L +D ++LFI+DEAD++++ GF   I  ++
Sbjct: 131 VREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVF 190

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKN 244
            +L P  Q+ + SAT   + L    ++M DP  +L++ ++ T  L G++Q          
Sbjct: 191 KKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELT--LEGIRQF--------- 239

Query: 245 PSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
               YV  EK+      L  L       Q +I+ N + + +++ + + N  F    + G 
Sbjct: 240 ----YVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGD 295

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
            DQK R   +  F+ G  R+LVTTDL ARGID   V LVIN ++P    TY+HR+GR+GR
Sbjct: 296 MDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPTSPDTYIHRIGRSGR 355

Query: 359 YGTRGLVITIVS 370
           +G +G+ I  V+
Sbjct: 356 FGRKGVAINFVT 367


>gi|312087840|ref|XP_003145629.1| DEAD/DEAH box helicase [Loa loa]
          Length = 483

 Score =  222 bits (565), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/385 (37%), Positives = 217/385 (56%), Gaps = 36/385 (9%)

Query: 4   DIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIV 63
           D+ +  RT DV    DV   + +++ +     L + GF K SP+Q  A P  + G D +V
Sbjct: 2   DMSEVIRTMDV--ETDVPDFSSLMLNRTSLNALAKAGFTKPSPVQARAIPSGMLGLDLLV 59

Query: 64  QSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVD 123
           Q+KSGTGK++VF + A+  L      +PQ +I+APTREIA QI   +R +   V    + 
Sbjct: 60  QAKSGTGKTMVFSLLAVENL-NAQFGRPQVLIVAPTREIASQIVSYIRMLAPVVV---IR 115

Query: 124 YFIGGTQ------VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            F+GG +      +++ K+ + IVVG+ GR+  ++++  L +  VRLF++DEADKL+   
Sbjct: 116 MFVGGNEKGVAEDIQKLKKSIHIVVGTTGRLCHLVRINALRLSHVRLFVLDEADKLMEDN 175

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F ++I +++S LPP KQ+ V SATY +    TL +YM D  L+R  D    LLGVKQ V 
Sbjct: 176 FQKEINYLFSALPPEKQVAVFSATYPYRLDTTLTRYMRDVHLVRV-DRDAQLLGVKQYVI 234

Query: 238 LIPECKNPSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
           +            D  +K+   ++LL +  + QC            +C +L  + F A  
Sbjct: 235 VAR----------DGTRKMNILLRLLLRLRYGQC----------NELCADLHRSRFDAVS 274

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           +SG   Q  R  ++   K   V++LV+TDL ARGIDA  V++VIN   P   ATYLHR+G
Sbjct: 275 ISGNMPQIDRTKAIRRLKNCMVKLLVSTDLTARGIDAPGVNIVINYGSPLVLATYLHRIG 334

Query: 355 RAGRYGTRGLVITIVSAESLVKFHS 379
           RAGR+GT+G   TI+S++  +K  S
Sbjct: 335 RAGRFGTQGAAFTIISSDQELKLFS 359


>gi|410906647|ref|XP_003966803.1| PREDICTED: eukaryotic initiation factor 4A-II-like [Takifugu
           rubripes]
          Length = 404

 Score =  221 bits (564), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 134/370 (36%), Positives = 210/370 (56%), Gaps = 24/370 (6%)

Query: 16  SNIDVLFEN--DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSI 73
           +N   L EN  D+ +++ + +G+   GF K S IQ  A    + G D I Q++SGTGK+ 
Sbjct: 23  TNCATLVENFDDMNLKENLLRGIYAYGFEKPSAIQQRAIVPCIEGNDVIAQAQSGTGKTA 82

Query: 74  VFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE- 132
            FV++ L + I + +++ Q +ILAPTRE+A QI  VV ++G ++ N      IGGT V  
Sbjct: 83  TFVISILQR-IDMSLKETQALILAPTRELAQQIHKVVMALGDYL-NCVCHACIGGTNVRA 140

Query: 133 -----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYS 187
                +   P QIVVG+PGR+  MIK K ++ D +++F++DEAD++++ GF + I  I+ 
Sbjct: 141 DILKLQATSP-QIVVGTPGRVFDMIKRKVVHPDCIKMFVLDEADEMLSRGFKDQIYEIFQ 199

Query: 188 QLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSL 247
           +LP   Q++++SAT   D L    K+M DP+ I  +     L G++Q    I  CK    
Sbjct: 200 ELPTDIQVVLLSATIPVDVLEVTTKFMRDPIRILVKKEELSLEGIRQF--YIDVCK---- 253

Query: 248 RYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKAR 304
               EE KL     L       Q VIF N + + + + E +   +F    + G  +QK R
Sbjct: 254 ----EEWKLDTLTDLYETLTITQAVIFVNTKRKVDWLTEKMKEKDFTVSAMHGDMEQKDR 309

Query: 305 LASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGL 364
              +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+
Sbjct: 310 DLIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGV 369

Query: 365 VITIVSAESL 374
            I +++ E +
Sbjct: 370 SINLLTTEDV 379


>gi|321479177|gb|EFX90133.1| hypothetical protein DAPPUDRAFT_300157 [Daphnia pulex]
          Length = 404

 Score =  221 bits (564), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 139/403 (34%), Positives = 218/403 (54%), Gaps = 32/403 (7%)

Query: 13  DVLSNIDVLFENDV-LIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYDAIV 63
           D L+NI+     DV +I      GL+E+        GF K S IQ  A   V+ G D I 
Sbjct: 14  DDLTNIEFETSEDVNVIPTFDSMGLREDLLRGIYAYGFEKPSAIQQRAIAPVIKGRDVIA 73

Query: 64  QSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVD 123
           Q++SGTGK+  F ++ L  L ++  ++ Q ++L+PTRE+AVQI  V+ ++G ++ N+   
Sbjct: 74  QAQSGTGKTATFSISILQSL-EIQTRETQILVLSPTRELAVQIQKVILALGDYM-NVQCH 131

Query: 124 YFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFV 179
             IGGT V    R +     IV G+PGR+  MI+ + L   S+++ ++DEAD+++N GF 
Sbjct: 132 ACIGGTNVGEDVRKLDYGQHIVSGTPGRVFDMIRRRTLRTRSIKMLVLDEADEMLNKGFK 191

Query: 180 EDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI 239
           E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +
Sbjct: 192 EQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAV 251

Query: 240 PECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
                       EE K   L  L       Q VIF N + + + + E +  ANF    + 
Sbjct: 252 ER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMH 301

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+
Sbjct: 302 GDMPQKERDTIMKEFRNGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS 361

Query: 357 GRYGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           GR+G +G+ I  V  + +     ++ +I   +A  V  +P N+
Sbjct: 362 GRFGRKGVAINFVKNDDI----RILRDIEQYYATQVDEMPMNV 400


>gi|393906639|gb|EFO21014.2| eukaryotic initiation factor 4A-III [Loa loa]
          Length = 404

 Score =  221 bits (564), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 128/366 (34%), Positives = 206/366 (56%), Gaps = 22/366 (6%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV+   D + + + + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F 
Sbjct: 27  VDVVHTFDSMGLGEELLRGIYSYGFEKPSAIQQRAIKQIVKGRDVIAQAQSGTGKTATFS 86

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           +A L  L  + +++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT V    R
Sbjct: 87  IAVLQSL-DISLRETQALILSPTRELAVQIQKVVLALGDYL-NVQCHACIGGTNVGEDIR 144

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   S+++ ++DEAD+++N GF E +  IY  LPP 
Sbjct: 145 KLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQLYDIYRYLPPG 204

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ               VD 
Sbjct: 205 AQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDR 253

Query: 253 EK----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           E+     L  L       Q VIF N + + + + E L  ANF    + G  +QK R A +
Sbjct: 254 EEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLAEKLKEANFTVSSMHGEMEQKERDAIM 313

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G  R+L++TD+ ARG+D   V LV+N ++P++   Y+HR+GR+GR+G +G+ I  
Sbjct: 314 KEFRGGASRLLISTDVFARGLDIPQVSLVVNYDLPNNRELYIHRIGRSGRFGRKGVAINF 373

Query: 369 VSAESL 374
           V ++ +
Sbjct: 374 VKSDDI 379


>gi|254566967|ref|XP_002490594.1| Nucleolar protein required for maturation of 18S rRNA [Komagataella
           pastoris GS115]
 gi|238030390|emb|CAY68313.1| Nucleolar protein required for maturation of 18S rRNA [Komagataella
           pastoris GS115]
 gi|328350981|emb|CCA37381.1| DEAD-box protein, putative RNA helicase similar to S. cerevisiae
           FAL1 (YDR021W) involved in rRNA processing [Komagataella
           pastoris CBS 7435]
          Length = 396

 Score =  221 bits (564), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF   S IQ  A   +L G D I Q++SGTGK+  F +  LN ++   
Sbjct: 30  LKEDLLRGIYGYGFEAPSAIQSRAIMQILTGKDTIAQAQSGTGKTATFSIGMLN-VVDTK 88

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVG 143
            +  Q I+L+PTRE+AVQI +V++++G ++ N+H    IGGT V    + +Q    IV G
Sbjct: 89  KKDTQAIVLSPTRELAVQINNVIQNLGDYM-NIHTYACIGGTSVGEDLKKLQKGQHIVSG 147

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + LN+ +V++ ++DEAD+L+  GF E I  IY  LPP  Q++VVSAT +
Sbjct: 148 TPGRVCDMIKRRNLNVRNVKMLVLDEADELMTKGFQEQIYDIYKTLPPSTQVVVVSATLT 207

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
            + L    K+M DP+ I  +     L G++Q      +C+    ++      L  L    
Sbjct: 208 KEVLVMTNKFMNDPVKILVKRDEVSLEGIRQFYI---QCEKEEWKF----DTLCDLYDSL 260

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF N + + + + E+L  ANF    + G   Q+ R   ++ F+ G  R+L++TD
Sbjct: 261 TVTQAVIFCNTKKKVDWLTEHLRKANFTVVSMHGDMKQEDRDRIMNEFRLGNSRVLISTD 320

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           + ARGID   V LVIN +IP     Y+HR+GR+GR+G +G+ + +V+ E + + H++
Sbjct: 321 VWARGIDVQQVSLVINYDIPFAKENYIHRIGRSGRFGRKGMAVNLVTEEDIGELHAI 377


>gi|41055130|ref|NP_957372.1| eukaryotic initiation factor 4A-III [Danio rerio]
 gi|82209617|sp|Q7ZVA6.1|IF4A3_DANRE RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|28277876|gb|AAH45939.1| Eukaryotic translation initiation factor 4A, isoform 3 [Danio
           rerio]
 gi|182892106|gb|AAI65833.1| Eif4a3 protein [Danio rerio]
          Length = 406

 Score =  221 bits (564), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 203/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 29  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFC 88

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           V+ L + + + V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R
Sbjct: 89  VSVL-QCLDIQVRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIR 146

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 147 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 206

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q+ ++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 207 TQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 256

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 316

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D + V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 317 EFRSGASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 376

Query: 370 SAESL 374
             + +
Sbjct: 377 KNDDI 381


>gi|51712358|ref|XP_485792.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Mus musculus]
 gi|82902181|ref|XP_918907.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Mus musculus]
          Length = 411

 Score =  221 bits (562), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 199/354 (56%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISML-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V+   R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLTLGDYM-NVQCHACIGGTNVDEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPICILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGNMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDIWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|312081503|ref|XP_003143055.1| ATP-dependent helicase DDX48 [Loa loa]
          Length = 399

 Score =  221 bits (562), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 128/366 (34%), Positives = 206/366 (56%), Gaps = 22/366 (6%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV+   D + + + + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F 
Sbjct: 27  VDVVHTFDSMGLGEELLRGIYSYGFEKPSAIQQRAIKQIVKGRDVIAQAQSGTGKTATFS 86

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           +A L  L  + +++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT V    R
Sbjct: 87  IAVLQSL-DISLRETQALILSPTRELAVQIQKVVLALGDYL-NVQCHACIGGTNVGEDIR 144

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   S+++ ++DEAD+++N GF E +  IY  LPP 
Sbjct: 145 KLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQLYDIYRYLPPG 204

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ               VD 
Sbjct: 205 AQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDR 253

Query: 253 EK----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           E+     L  L       Q VIF N + + + + E L  ANF    + G  +QK R A +
Sbjct: 254 EEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLAEKLKEANFTVSSMHGEMEQKERDAIM 313

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G  R+L++TD+ ARG+D   V LV+N ++P++   Y+HR+GR+GR+G +G+ I  
Sbjct: 314 KEFRGGASRLLISTDVFARGLDIPQVSLVVNYDLPNNRELYIHRIGRSGRFGRKGVAINF 373

Query: 369 VSAESL 374
           V ++ +
Sbjct: 374 VKSDDI 379


>gi|384489792|gb|EIE81014.1| ATP-dependent RNA helicase FAL1 [Rhizopus delemar RA 99-880]
          Length = 396

 Score =  221 bits (562), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 210/380 (55%), Gaps = 23/380 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++AL + I   
Sbjct: 30  LKEDLLRGIYAYNFEKPSAIQQRAIVPIIKGRDVIAQAQSGTGKTATFSISAL-QTIDTT 88

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
           +++ Q +IL+PTRE+A QI  VV ++G ++ N+     IGGT V    R     V IV G
Sbjct: 89  IRETQALILSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSVGEDIRKLEGGVHIVSG 147

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ I+DEAD+L+N GF + I  IY  LPP  Q++++SAT  
Sbjct: 148 TPGRVYDMIRRRVLRTRNMKMLILDEADELLNMGFKDQIYDIYRYLPPGTQVVLLSATLP 207

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           +D L     +M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 208 NDVLEMTNNFMTDPIRILVKRDELTLEGIKQFFVAVEQ----------EEWKFDTLCDLY 257

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F++G  R+L+
Sbjct: 258 DTLTITQAVIFCNQKKKVDWLTEKMREANFTVSAMHGEMPQKERDAIMQEFRQGASRVLI 317

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V  + L     +
Sbjct: 318 TTDVWARGIDVQQVSLVINYDLPFNRENYIHRIGRSGRFGRKGVAINFVKNDDL----KI 373

Query: 381 MGEINLDHAFNVGLVPDNLT 400
           + +I   ++  +  +P N+T
Sbjct: 374 LRDIEQYYSTQIDEMPMNVT 393


>gi|334323012|ref|XP_001370945.2| PREDICTED: eukaryotic initiation factor 4A-III [Monodelphis
           domestica]
          Length = 437

 Score =  221 bits (562), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 125/365 (34%), Positives = 203/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 34  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFS 93

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           ++ L + + + V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R
Sbjct: 94  ISVL-QCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIR 151

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 152 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 211

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 212 TQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 261

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 262 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 321

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 322 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 381

Query: 370 SAESL 374
             + +
Sbjct: 382 KNDDI 386


>gi|196014693|ref|XP_002117205.1| DEAD box ATP-dependent RNA helicase [Trichoplax adhaerens]
 gi|190580170|gb|EDV20255.1| DEAD box ATP-dependent RNA helicase [Trichoplax adhaerens]
          Length = 401

 Score =  221 bits (562), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 126/354 (35%), Positives = 201/354 (56%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF K S IQ  +   ++ G D I Q++SGTGK+  F ++ L + I   
Sbjct: 35  LKEDLVRGIYAYGFEKPSAIQQRSIKPIIEGRDVIAQAQSGTGKTATFSISVL-QAIDTQ 93

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q +I++PTRE+AVQI  V+ ++G ++ N+     IGGT V    R +     IV G
Sbjct: 94  LRETQALIMSPTRELAVQIQKVILALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHIVSG 152

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           SPGR+  MI+ + L   S+++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 153 SPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNQGFKEQIYDVYRYLPPSTQVVLLSATLP 212

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           HD L   +K+M +P+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 213 HDILEMTRKFMTEPMRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 262

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  R+L+
Sbjct: 263 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGASRVLI 322

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GRYG +G+ I  V ++ +
Sbjct: 323 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKSDDI 376


>gi|209880596|ref|XP_002141737.1| eukaryotic translation initiation factor 4A [Cryptosporidium muris
           RN66]
 gi|209557343|gb|EEA07388.1| eukaryotic translation initiation factor 4A, putative
           [Cryptosporidium muris RN66]
          Length = 404

 Score =  220 bits (561), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 134/378 (35%), Positives = 215/378 (56%), Gaps = 23/378 (6%)

Query: 7   KCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQ 64
           + A T ++ SN D + E    + ++  + +G+   GF K S IQ      +L+GYD I Q
Sbjct: 15  QVASTGEIESNYDEIVECFEALNLDGNLLRGIFAYGFEKPSAIQQRGVKPILDGYDTIGQ 74

Query: 65  SKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDY 124
           ++SGTGK+  FV+AAL K I   +   Q ++LAPTRE+A QI  V  ++G +  +L    
Sbjct: 75  AQSGTGKTATFVIAALQK-IDYSLNACQVLLLAPTRELAQQIQKVALALGDYC-DLRCHA 132

Query: 125 FIGGTQVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVE 180
            +GGT V     + K  V +VVG+PGR+  M+   YL +D ++LFI+DEAD++++ GF  
Sbjct: 133 CVGGTSVRDDMNKLKNGVHMVVGTPGRVFDMLDKGYLRVDHLKLFILDEADEMLSRGFKL 192

Query: 181 DITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVAL 238
            I  I+ +LP   Q+ + SAT  ++ L    ++M DP  +L++ E+ T  L G++Q    
Sbjct: 193 QIHDIFKKLPQDVQVALFSATMPNEILHLTTQFMRDPKRILVKQEELT--LEGIRQYYVA 250

Query: 239 IPECKNPSLRYVDEEK--KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
           + +         DE K   LV L       Q +I+ N ++R + + + + + +F    + 
Sbjct: 251 VEK---------DEWKLATLVDLYETLTIVQAIIYCNTRIRVDRLTKQMTDRDFTCSCMH 301

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  DQK R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P  A TY+HR+GR+
Sbjct: 302 GDMDQKDREVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPVSAETYIHRIGRS 361

Query: 357 GRYGTRGLVITIVSAESL 374
           GR+G +G+ +  V+ + +
Sbjct: 362 GRFGRKGVAVNFVTVDDI 379


>gi|348544709|ref|XP_003459823.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Oreochromis
           niloticus]
          Length = 406

 Score =  220 bits (561), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 203/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 29  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFC 88

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           V+ L + + + V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R
Sbjct: 89  VSVL-QCLDIQVRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIR 146

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 147 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 206

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 207 TQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 256

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 316

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 317 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 376

Query: 370 SAESL 374
             + +
Sbjct: 377 KNDDI 381


>gi|114794619|pdb|2HXY|A Chain A, Crystal Structure Of Human Apo-Eif4aiii
 gi|114794620|pdb|2HXY|B Chain B, Crystal Structure Of Human Apo-Eif4aiii
 gi|114794621|pdb|2HXY|C Chain C, Crystal Structure Of Human Apo-Eif4aiii
 gi|114794622|pdb|2HXY|D Chain D, Crystal Structure Of Human Apo-Eif4aiii
          Length = 391

 Score =  220 bits (561), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 125/365 (34%), Positives = 203/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 12  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFS 71

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           ++ L + + + V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R
Sbjct: 72  ISVL-QCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIR 129

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 130 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 189

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 190 TQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 239

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 240 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 299

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 300 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 359

Query: 370 SAESL 374
             + +
Sbjct: 360 KNDDI 364


>gi|410917560|ref|XP_003972254.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Takifugu
           rubripes]
          Length = 406

 Score =  220 bits (561), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L + + + 
Sbjct: 40  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVL-QCLDIQ 98

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R +     +V G
Sbjct: 99  VRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 157

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 158 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 217

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 218 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 267

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 268 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 327

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 328 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 381


>gi|321253117|ref|XP_003192635.1| hypothetical protein CGB_C1160C [Cryptococcus gattii WM276]
 gi|317459104|gb|ADV20848.1| hypothetical protein CNBC0850 [Cryptococcus gattii WM276]
          Length = 396

 Score =  220 bits (561), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 128/354 (36%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   I   
Sbjct: 30  LKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQS-IDTN 88

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+AVQI  VV ++G ++ N+     IGGT V    R +    Q+V G
Sbjct: 89  LRETQALVLSPTRELAVQIQTVVLALGDYM-NVSCHACIGGTSVGEDIRKLEAGQQVVSG 147

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ I+DE+D+L+N GF + I  IY  LPP  Q++VVSAT  
Sbjct: 148 TPGRVFDMIRRRNLRTKDIKMLILDESDELLNKGFKDQIYDIYRYLPPATQVVVVSATLP 207

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           HD L    K+M DP+ I  +     L G+KQ    + +          E+ K   L  L 
Sbjct: 208 HDVLEMTTKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTLCDLY 257

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G+ R+L+
Sbjct: 258 DTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLI 317

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ + +
Sbjct: 318 TTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|124810293|ref|XP_001348829.1| helicase 45 [Plasmodium falciparum 3D7]
 gi|23497730|gb|AAN37268.1| helicase 45 [Plasmodium falciparum 3D7]
 gi|83272531|gb|ABC00776.1| eIF4A-like [Plasmodium falciparum]
 gi|112434012|gb|ABI18354.1| eIF4A-like [Plasmodium falciparum]
          Length = 398

 Score =  220 bits (561), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 132/372 (35%), Positives = 211/372 (56%), Gaps = 34/372 (9%)

Query: 11  TKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           T++++   D L  N+ L+     +G+   GF K S IQ      +LNGYD I Q++SGTG
Sbjct: 18  TEEIVDTFDALGLNEKLL-----RGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTG 72

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT- 129
           K+  FV+++L +LI       Q +ILAPTRE+A QI  VV ++G ++K +     +GGT 
Sbjct: 73  KTATFVISSL-QLINYDYVACQALILAPTRELAQQIQKVVLALGDYLK-VKCHACVGGTV 130

Query: 130 ---QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
               +++ K+ V +VVG+PGR+  MI  ++L +D ++LFI+DEAD++++ GF   I  ++
Sbjct: 131 VREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVF 190

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKN 244
            +L P  Q+ + SAT   + L    ++M DP  +L++ ++ T  L G++Q          
Sbjct: 191 KKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELT--LEGIRQF--------- 239

Query: 245 PSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
               YV  EK+      L  L       Q +I+ N + + +++ + + N  F    + G 
Sbjct: 240 ----YVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGD 295

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
            DQK R   +  F+ G  R+LVTTDL ARGID   V LVIN ++P    TY+HR+GR+GR
Sbjct: 296 MDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGR 355

Query: 359 YGTRGLVITIVS 370
           +G +G+ I  V+
Sbjct: 356 FGRKGVAINFVT 367


>gi|225717006|gb|ACO14349.1| Eukaryotic initiation factor 4A-III [Esox lucius]
          Length = 406

 Score =  220 bits (560), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 202/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 29  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFC 88

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           V+ L + + + V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R
Sbjct: 89  VSVL-QCLDIQVRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIR 146

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 147 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 206

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q+ ++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 207 TQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 256

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 316

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 317 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 376

Query: 370 SAESL 374
             + +
Sbjct: 377 KNDDI 381


>gi|58265474|ref|XP_569893.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108955|ref|XP_776592.1| hypothetical protein CNBC0850 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|338818095|sp|P0CQ73.1|FAL1_CRYNB RecName: Full=ATP-dependent RNA helicase FAL1
 gi|338818096|sp|P0CQ72.1|FAL1_CRYNJ RecName: Full=ATP-dependent RNA helicase FAL1
 gi|50259272|gb|EAL21945.1| hypothetical protein CNBC0850 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226125|gb|AAW42586.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 396

 Score =  220 bits (560), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 128/354 (36%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   I   
Sbjct: 30  LKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQS-IDTN 88

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+AVQI  VV ++G ++ N+     IGGT V    R +    Q+V G
Sbjct: 89  LRETQALVLSPTRELAVQIQTVVLALGDYM-NVSCHACIGGTSVGEDIRKLEAGQQVVSG 147

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ I+DE+D+L+N GF + I  IY  LPP  Q++VVSAT  
Sbjct: 148 TPGRVFDMIRRRNLRTKDIKMLILDESDELLNKGFKDQIYDIYRYLPPATQVVVVSATLP 207

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           HD L    K+M DP+ I  +     L G+KQ    + +          E+ K   L  L 
Sbjct: 208 HDVLEMTTKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTLCDLY 257

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G+ R+L+
Sbjct: 258 DTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLI 317

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ + +
Sbjct: 318 TTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|213511116|ref|NP_001134430.1| eukaryotic initiation factor 4A-III [Salmo salar]
 gi|251764756|sp|B5DG42.1|IF4A3_SALSA RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|197631985|gb|ACH70716.1| eukaryotic translation initiation factor 4A isoform 3 [Salmo salar]
 gi|209733202|gb|ACI67470.1| Eukaryotic initiation factor 4A-III [Salmo salar]
          Length = 406

 Score =  220 bits (560), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 202/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 29  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFC 88

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           V+ L + + + V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R
Sbjct: 89  VSVL-QCLDIQVRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHSCIGGTNVGEDIR 146

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 147 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 206

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q+ ++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 207 TQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 256

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 316

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 317 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 376

Query: 370 SAESL 374
             + +
Sbjct: 377 KNDDI 381


>gi|82196760|sp|Q5U526.1|I4A3A_XENLA RecName: Full=Eukaryotic initiation factor 4A-III-A;
           Short=eIF-4A-III-A; Short=eIF4A-III-A; AltName:
           Full=ATP-dependent RNA helicase DDX48-A; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3-A; AltName:
           Full=DEAD box protein 48-A; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3 A
 gi|54311504|gb|AAH84859.1| Unknown (protein for MGC:85498) [Xenopus laevis]
          Length = 415

 Score =  220 bits (560), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 202/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 38  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFC 97

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           V+ L + + + V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R
Sbjct: 98  VSVL-QCLDIQVRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIR 155

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 156 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 215

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q+ ++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 216 TQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 265

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 266 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 325

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 326 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGGKGVAINFV 385

Query: 370 SAESL 374
             + +
Sbjct: 386 KNDDI 390


>gi|432951240|ref|XP_004084765.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Oryzias
           latipes]
          Length = 406

 Score =  220 bits (560), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 125/365 (34%), Positives = 203/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 29  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFC 88

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           ++ L + + + V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R
Sbjct: 89  ISVL-QCLDIQVRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIR 146

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 147 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 206

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 207 TQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 256

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 316

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 317 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 376

Query: 370 SAESL 374
             + +
Sbjct: 377 KNDDI 381


>gi|291242437|ref|XP_002741112.1| PREDICTED: eukaryotic translation initiation factor 4A-like
           [Saccoglossus kowalevskii]
          Length = 398

 Score =  220 bits (560), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 130/360 (36%), Positives = 200/360 (55%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           F+N  L E  +R G+   GF K S IQ  A   V+ G D I Q++SGTGK+  F ++ L 
Sbjct: 27  FDNMGLREDLLR-GIYAYGFEKPSAIQQRAVRPVVKGRDVIAQAQSGTGKTATFSISILQ 85

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
            L    V++ Q +IL+PTRE+AVQI  V+ ++G ++ ++     IGGT +    R +   
Sbjct: 86  TL-DTQVRETQALILSPTRELAVQIQKVILALGDYM-SVQCHSCIGGTNIGEDIRKLDYG 143

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L   +++L ++DEAD+++N GF E I  +Y  LPP  Q+++
Sbjct: 144 QHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQIYDVYRYLPPATQVIL 203

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
            SAT  H+ L    K+M +P+ I  +     L G+KQ    +            EE K  
Sbjct: 204 FSATLPHEILEMTHKFMTEPIRILVKRDELTLEGIKQFFVAVER----------EEWKFD 253

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G
Sbjct: 254 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSG 313

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GRYG +G+ I  V ++ +
Sbjct: 314 ASRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKSDDI 373


>gi|156099810|ref|XP_001615701.1| RNA helicase-1 [Plasmodium vivax Sal-1]
 gi|5679692|emb|CAB51741.1| RNA helicase-1 [Plasmodium cynomolgi]
 gi|148804575|gb|EDL45974.1| RNA helicase-1, putative [Plasmodium vivax]
 gi|389585166|dbj|GAB67897.1| RNA helicase-1 [Plasmodium cynomolgi strain B]
          Length = 398

 Score =  220 bits (560), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 132/372 (35%), Positives = 211/372 (56%), Gaps = 34/372 (9%)

Query: 11  TKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           T++++   D L  N+ L+     +G+   GF K S IQ      +LNGYD I Q++SGTG
Sbjct: 18  TEEIVDTFDALGLNEKLL-----RGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTG 72

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT- 129
           K+  FV+++L +LI       Q +ILAPTRE+A QI  VV ++G ++K +     +GGT 
Sbjct: 73  KTATFVISSL-QLINYDYVACQALILAPTRELAQQIQKVVLALGDYLK-VKCHACVGGTV 130

Query: 130 ---QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
               +++ K+ V +VVG+PGR+  MI  ++L +D ++LFI+DEAD++++ GF   I  ++
Sbjct: 131 VREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVF 190

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKN 244
            +L P  Q+ + SAT   + L    ++M DP  +L++ ++ T  L G++Q          
Sbjct: 191 KKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELT--LEGIRQF--------- 239

Query: 245 PSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
               YV  EK+      L  L       Q +I+ N + + +++ + + N  F    + G 
Sbjct: 240 ----YVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGD 295

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
            DQK R   +  F+ G  R+LVTTDL ARGID   V LVIN ++P    TY+HR+GR+GR
Sbjct: 296 MDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPCSPDTYIHRIGRSGR 355

Query: 359 YGTRGLVITIVS 370
           +G +G+ I  V+
Sbjct: 356 FGRKGVAINFVT 367


>gi|427789749|gb|JAA60326.1| Putative eif4aiii [Rhipicephalus pulchellus]
          Length = 401

 Score =  220 bits (560), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 28/376 (7%)

Query: 15  LSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQS 65
           LSN++     DV +          + + +G+   GF K S IQ  +   V+ G D I Q+
Sbjct: 13  LSNVEFETSEDVEVIPTFDAIGLREDLLRGIYAYGFEKPSAIQQRSIKPVIKGRDVIAQA 72

Query: 66  KSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF 125
           +SGTGK+  F +  L + I   V++ Q +IL+PTRE+AVQI  V+ ++G ++ N+     
Sbjct: 73  QSGTGKTATFSIGVL-QTIDTQVRETQALILSPTRELAVQIQKVILALGDYM-NVQCHAC 130

Query: 126 IGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVED 181
           IGGT +    R +     IV G+PGR+  MIK + L   ++++ ++DEAD+++N GF E 
Sbjct: 131 IGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRNLRTRAIKMLVLDEADEMLNKGFKEQ 190

Query: 182 ITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPE 241
           I  +Y  LPP  Q++++SAT  H+ L    K+M +P+ I  +     L G+KQ    +  
Sbjct: 191 IYDVYRYLPPCTQVVLISATLPHEILEMTSKFMTEPVRILVKRDELTLEGIKQFFVAVER 250

Query: 242 CKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
                     EE K   L  L       Q VIF N + + + + E +  ANF    + G 
Sbjct: 251 ----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSEKMREANFTVSSMHGD 300

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
             QK R A +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR
Sbjct: 301 MPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR 360

Query: 359 YGTRGLVITIVSAESL 374
           +G +G+ I  V  + +
Sbjct: 361 FGRKGVAINFVKNDDI 376


>gi|154285130|ref|XP_001543360.1| eukaryotic initiation factor 4A-12 [Ajellomyces capsulatus NAm1]
 gi|160385733|sp|A6QSQ0.1|FAL1_AJECN RecName: Full=ATP-dependent RNA helicase FAL1
 gi|150407001|gb|EDN02542.1| eukaryotic initiation factor 4A-12 [Ajellomyces capsulatus NAm1]
          Length = 450

 Score =  219 bits (559), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 139/427 (32%), Positives = 231/427 (54%), Gaps = 26/427 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              +++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     +
Sbjct: 88  DTVLRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDHGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQE-REDVEQTAEESSK 436
             ++ +I L ++  +  +P N  G       R  + L+  L Q+   R     T   S+ 
Sbjct: 374 -RILRDIELYYSTQIDEMPMN--GTLFYLRYRPMSRLSLWLTQSNSCRPSHVTTLSWSTN 430

Query: 437 VENTKPL 443
           VE+T PL
Sbjct: 431 VEHTFPL 437


>gi|387913798|gb|AFK10508.1| eukaryotic initiation factor 4a-iii [Callorhinchus milii]
 gi|392881398|gb|AFM89531.1| eukaryotic initiation factor [Callorhinchus milii]
          Length = 403

 Score =  219 bits (559), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 37  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCISVL-QCLDIQ 95

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R +     +V G
Sbjct: 96  VRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 154

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 155 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVILISATLP 214

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 215 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 264

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 265 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 324

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 325 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 378


>gi|116668332|pdb|2J0U|A Chain A, The Crystal Structure Of Eif4aiii-Barentsz Complex At 3.0
           A Resolution
          Length = 374

 Score =  219 bits (559), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L + + + 
Sbjct: 8   LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVL-QCLDIQ 66

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQ+   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 67  VRETQALILAPTRELAVQVQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 125

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 126 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 185

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 186 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 235

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 236 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 295

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ +  V  + +
Sbjct: 296 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAVNFVKNDDI 349


>gi|401883885|gb|EJT48069.1| hypothetical protein A1Q1_02985 [Trichosporon asahii var. asahii
           CBS 2479]
 gi|406696254|gb|EKC99547.1| hypothetical protein A1Q2_06163 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 458

 Score =  219 bits (559), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/383 (36%), Positives = 210/383 (54%), Gaps = 32/383 (8%)

Query: 41  FVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTR 100
           F K S IQ  A   ++ G D I Q++SGTGK+  F ++AL  L  L  +  Q +IL+PTR
Sbjct: 38  FEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISALQSL-DLNNRDTQALILSPTR 96

Query: 101 EIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKY 156
           E+AVQI  V  ++G ++ N+     IGGT V    R +    QIV G+PGR+  MI+ + 
Sbjct: 97  ELAVQIQTVALALGDYM-NVSCHACIGGTSVGEDIRKLEAGQQIVTGTPGRVFDMIRRRN 155

Query: 157 LNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVD 216
           L    +++ I+DEAD+L+N GF + I  IY  LPP  Q++VVSAT  HD L    K+M +
Sbjct: 156 LRTKDIKMLILDEADELLNKGFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTE 215

Query: 217 PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVI 270
           P+ I  +     L G+KQ              +V  EK+      L  L       Q VI
Sbjct: 216 PVRILVKRDELTLEGIKQF-------------FVAVEKEDWKFDTLCDLYDTLTITQAVI 262

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F N + + + + E +  ANF    + G   QK R A +  F+ G+ R+L+TTD+ ARGID
Sbjct: 263 FCNTRRKVDWLTEKMREANFTVSSMHGEMVQKERDAIMAEFRSGQSRVLITTDVWARGID 322

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINLDHAF 390
              V LVIN ++P++   YLHR+GR+GR+G +G+ I  V+ E +     ++ +I + +A 
Sbjct: 323 VQQVSLVINYDLPNNRENYLHRIGRSGRFGRKGVAINFVTVEDV----HILRDIEVYYAT 378

Query: 391 NVGLVPDNLTGDQINWTQRVQTL 413
            +  +P N+   Q     RVQT+
Sbjct: 379 QIDEMPMNI---QAGVDVRVQTI 398


>gi|145347909|ref|XP_001418402.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578631|gb|ABO96695.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 407

 Score =  219 bits (559), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 126/364 (34%), Positives = 205/364 (56%), Gaps = 15/364 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + + L+  GF   SP+Q+A  P    G D I Q+KSGTGK++ FVV AL + +
Sbjct: 41  DLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIALER-V 99

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVD--------YFIGGTQVERPKR 136
               ++ Q + LAPTRE AVQ  +    +    K++  D          +GG  V+  + 
Sbjct: 100 DAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGLPVKEDRA 159

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +VVG+PGR +QM++   +  D  RL I+DEAD L++  F  D+ + YS LP  
Sbjct: 160 RLASQPHVVVGTPGRTRQMLEEGSMACDGARLLILDEADALLSGTFERDVLFAYSMLPER 219

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV-- 250
           KQ+   SATYS   L  L++ M  P  +   ++T  L GV+Q  +LI +     L  V  
Sbjct: 220 KQVCAFSATYSKTLLGDLERLMRAPQKVMLCESTTALQGVRQFYSLIEKEDGTKLADVIT 279

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
            +E +L+++     F+Q V+F       E + + L +    A + +G   Q+ R+  ++ 
Sbjct: 280 AKEARLLKICGDVSFHQAVVFVRRLAWGEALAKRLTSQGLKAAFTAGTLPQERRMKVMEE 339

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +  ++R+LV+TDL ARG+D  +V+LVINL++P   ATY+HR+GR GR+GT GL + +++
Sbjct: 340 MRNFQLRVLVSTDLTARGVDLTHVNLVINLDVPPSGATYMHRIGRTGRFGTYGLAVAVLT 399

Query: 371 AESL 374
           A+ L
Sbjct: 400 ADEL 403


>gi|241737496|ref|XP_002414033.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
 gi|215507887|gb|EEC17341.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
          Length = 402

 Score =  219 bits (558), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 134/390 (34%), Positives = 211/390 (54%), Gaps = 29/390 (7%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAA 51
           MA   ++  +T+D LSN++     DV +          + + +G+   GF K S IQ  +
Sbjct: 1   MASTRRRVVQTED-LSNVEFETSEDVEVIPTFDAIGLREDLLRGIYAYGFEKPSAIQQRS 59

Query: 52  FPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVR 111
              V+ G D I Q++SGTGK+  F +  L + I   +++ Q +IL+PTRE+A QI  V+ 
Sbjct: 60  IKPVIKGRDVIAQAQSGTGKTATFSIGVL-QTIDTQMRETQALILSPTRELAGQIQKVIL 118

Query: 112 SVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIM 167
           ++G ++ N+     IGGT +    R +     IV G+PGR+  MIK + L   S+++ ++
Sbjct: 119 ALGDYM-NVQCHSCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRNLRTRSIKMLVL 177

Query: 168 DEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATR 227
           DEAD+++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +    
Sbjct: 178 DEADEMLNKGFKEQIYDVYRYLPPCTQVVLISATLPHEILEMTSKFMTDPVRILVKRDEL 237

Query: 228 PLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICEN 284
            L G+KQ    +            EE K   L  L       Q VIF N + + + + E 
Sbjct: 238 TLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSEK 287

Query: 285 LANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPH 344
           +  ANF    + G   QK R A +  F+ G  R+L+TTD+ ARGID   V LVIN ++P+
Sbjct: 288 MREANFTVSSMHGDMPQKERDAIMKEFRSGSSRVLITTDIWARGIDVQQVSLVINYDLPN 347

Query: 345 DAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 348 NRELYIHRIGRSGRFGRKGVAINFVKNDDI 377


>gi|26344810|dbj|BAC36054.1| unnamed protein product [Mus musculus]
          Length = 411

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 123/348 (35%), Positives = 195/348 (56%), Gaps = 19/348 (5%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L + + + V++ Q 
Sbjct: 51  RGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVL-QCLDIQVRETQA 109

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIK 149
           +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G+PGR+ 
Sbjct: 110 LILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVF 168

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  H+ L  
Sbjct: 169 DMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEM 228

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFN 266
             K+M DP+ I  +     L G+KQ    +            EE K   L  L       
Sbjct: 229 TNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTIT 278

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L++TD+ A
Sbjct: 279 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 338

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           RG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 339 RGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|82540694|ref|XP_724645.1| RNA helicase-1 [Plasmodium yoelii yoelii 17XNL]
 gi|23479359|gb|EAA16210.1| RNA helicase-1 [Plasmodium yoelii yoelii]
          Length = 443

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 133/380 (35%), Positives = 214/380 (56%), Gaps = 36/380 (9%)

Query: 3   HDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAI 62
           +DI+    T++++   D L  N+ L+     +G+   GF K S IQ      +L GYD I
Sbjct: 12  NDIE--GNTEEIVDTFDALGLNEKLL-----RGIYSYGFEKPSAIQQRGIKPILKGYDTI 64

Query: 63  VQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHV 122
            Q++SGTGK+  FV+++L +LI       Q +ILAPTRE+A QI  VV ++G ++K +  
Sbjct: 65  GQAQSGTGKTATFVISSL-QLINYDYVACQALILAPTRELAQQIQKVVLALGDYLK-VKC 122

Query: 123 DYFIGGT----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF 178
              +GGT     +++ K+ V +VVG+PGR+  MI  ++L +D ++LFI+DEAD++++ GF
Sbjct: 123 HACVGGTVVREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGF 182

Query: 179 VEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLV 236
              I  ++ +L P  Q+ + SAT   + L    ++M DP  +L++ ++ T  L G++Q  
Sbjct: 183 KAQIYEVFKKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELT--LEGIRQF- 239

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV  EK+      L  L       Q +I+ N + + +++ + + N  F
Sbjct: 240 ------------YVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLF 287

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
               + G  DQK R   +  F+ G  R+LVTTDL ARGID   V LVIN ++P    TY+
Sbjct: 288 TVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPCSPDTYI 347

Query: 351 HRMGRAGRYGTRGLVITIVS 370
           HR+GR+GR+G +G+ I  V+
Sbjct: 348 HRIGRSGRFGRKGVAINFVT 367


>gi|147902730|ref|NP_001084200.1| eukaryotic initiation factor 4A-III-B [Xenopus laevis]
 gi|82189798|sp|O42226.1|I4A3B_XENLA RecName: Full=Eukaryotic initiation factor 4A-III-B;
           Short=XeIF-4AIII; Short=eIF-4A-III-B; Short=eIF4A-III-B;
           AltName: Full=ATP-dependent RNA helicase DDX48-B;
           AltName: Full=ATP-dependent RNA helicase eIF4A-3-B;
           AltName: Full=DEAD box protein 48-B; AltName:
           Full=Eukaryotic translation initiation factor 4A isoform
           3-B
 gi|2443810|gb|AAB71410.1| eukaryotic translation initiation factor XeIF-4AIII [Xenopus
           laevis]
          Length = 414

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 124/365 (33%), Positives = 202/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 37  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSGTGKTATFC 96

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           V+ L + + + +++ Q +ILAPT+E+A QI  V+ ++G ++ N+     IGGT V    R
Sbjct: 97  VSVL-QCLDIQIRETQALILAPTKELARQIQKVLLALGDYM-NVQCHACIGGTNVGEDIR 154

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 155 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 214

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q+ ++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 215 TQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 264

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 265 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 324

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 325 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 384

Query: 370 SAESL 374
             + +
Sbjct: 385 KNDDI 389


>gi|395324168|gb|EJF56614.1| ATP-dependent RNA helicase FAL1 [Dichomitus squalens LYAD-421 SS1]
          Length = 397

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 124/360 (34%), Positives = 207/360 (57%), Gaps = 23/360 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   
Sbjct: 27  DDLGLKEDLLRGIYAYNFEKPSAIQQRAILPIIQGRDVIAQAQSGTGKTATFSISILQS- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R ++    
Sbjct: 86  IDVTVRETQALVLSPTRELATQIQSVLLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 144

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 145 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 204

Query: 200 ATYSHDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           AT  +D L    K+M DP+  L+R ++ T  L G+KQ    + +          E+ K  
Sbjct: 205 ATLPYDVLEMTTKFMTDPIRILVRRDELT--LEGIKQFFVAVEK----------EDWKFD 252

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E + NANF    + G   QK R A +  F+ G
Sbjct: 253 TLCDLYDTLTITQAVIFCNTRRKVDWLTEKMRNANFTVSSMHGEMAQKERDAIMAEFRSG 312

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 313 TSRVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 372


>gi|20149756|ref|NP_619610.1| eukaryotic initiation factor 4A-III [Mus musculus]
 gi|42560197|sp|Q91VC3.3|IF4A3_MOUSE RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|14198152|gb|AAH08132.1| Eukaryotic translation initiation factor 4A, isoform 3 [Mus
           musculus]
 gi|15277517|gb|AAH12862.1| Eukaryotic translation initiation factor 4A, isoform 3 [Mus
           musculus]
 gi|74138617|dbj|BAE27130.1| unnamed protein product [Mus musculus]
 gi|74142343|dbj|BAE31931.1| unnamed protein product [Mus musculus]
 gi|74146845|dbj|BAE41387.1| unnamed protein product [Mus musculus]
 gi|74186129|dbj|BAE34233.1| unnamed protein product [Mus musculus]
 gi|74188979|dbj|BAE39256.1| unnamed protein product [Mus musculus]
 gi|74212198|dbj|BAE40258.1| unnamed protein product [Mus musculus]
 gi|74214032|dbj|BAE29433.1| unnamed protein product [Mus musculus]
 gi|74220630|dbj|BAE31525.1| unnamed protein product [Mus musculus]
 gi|148702746|gb|EDL34693.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 48 [Mus musculus]
          Length = 411

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|389746771|gb|EIM87950.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 396

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 124/358 (34%), Positives = 202/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   +  G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLGLKEDLLRGIYAYNFEKPSAIQQRAIVPITQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IV G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 IVSGTPGRVFDMIRRRTLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E + NANF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRNANFTVSSMHGEMPQKERDAIMAEFRGGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|308322209|gb|ADO28242.1| eukaryotic initiation factor 4a-iii [Ictalurus furcatus]
          Length = 406

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 202/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F 
Sbjct: 29  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFC 88

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           V+ L + + + V++ Q +ILAPTRE+A QI  V+ ++G  + N+     IGGT V    R
Sbjct: 89  VSVL-QCLDIQVRETQALILAPTRELAGQIQKVLLALGDFM-NVQCHACIGGTNVGEDIR 146

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 147 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 206

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 207 TQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 256

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 257 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 316

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 317 EFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 376

Query: 370 SAESL 374
             + +
Sbjct: 377 KNDDI 381


>gi|60652753|gb|AAX29071.1| DEAD box polypeptide 48 [synthetic construct]
          Length = 412

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|40788956|dbj|BAA04879.2| KIAA0111 [Homo sapiens]
          Length = 412

 Score =  219 bits (558), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 46  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 104

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 105 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 163

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 164 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 223

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 224 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 273

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 274 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 333

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 334 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 387


>gi|71897163|ref|NP_001025820.1| eukaryotic initiation factor 4A-III [Gallus gallus]
 gi|82197884|sp|Q5ZM36.1|IF4A3_CHICK RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|53127756|emb|CAG31207.1| hypothetical protein RCJMB04_3e17 [Gallus gallus]
          Length = 412

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 46  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 104

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 105 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 163

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 164 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 223

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 224 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 273

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 274 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 333

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 334 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 387


>gi|449676771|ref|XP_002166522.2| PREDICTED: eukaryotic initiation factor 4A-III-like [Hydra
           magnipapillata]
          Length = 406

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 130/360 (36%), Positives = 202/360 (56%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  IR G+   GF + S IQ  A   ++ G D I Q++SGTGK+  F +AAL 
Sbjct: 35  FEQMKLREDLIR-GIYAYGFERPSAIQQRAIIPIIKGRDVIAQAQSGTGKTATFSIAALQ 93

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           + I   +++ Q ++L+PTRE+A QI  VV ++G ++ ++     IGGT +    R +   
Sbjct: 94  Q-IDTRLRETQVLVLSPTRELACQIQKVVLALGDYM-SIQCHACIGGTNIGEDIRKLDYG 151

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MIK + L   S++L I+DE+D+++N GF E I  +Y  LPP  Q+++
Sbjct: 152 QHIVSGTPGRVFDMIKRRNLRTRSIKLLILDESDEMLNKGFKEQIYDVYRFLPPATQVVL 211

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  H+ L   QK+M DP+ I  +     L G+KQ    +            EE K  
Sbjct: 212 VSATLPHEILEMTQKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFE 261

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E +  +NF    + G   QK R + +  F+ G
Sbjct: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRESNFTVVSMHGDMPQKERDSIMKEFRSG 321

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ +RG+D   V LVIN ++P++   Y+HR+GR+GRYG +G+ I  V ++ +
Sbjct: 322 SSRVLISTDVWSRGLDVPQVSLVINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKSDDI 381


>gi|402081012|gb|EJT76157.1| ATP-dependent RNA helicase fal-1 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 409

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 133/385 (34%), Positives = 214/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 37  FESMALKESLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 94

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 95  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 153

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 154 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVV 213

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    I +          E+ K  
Sbjct: 214 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAIEK----------EDWKFD 263

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 264 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 323

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 324 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 383

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 384 ----RILRDIELYYSTQIDEMPMNV 404


>gi|350538331|ref|NP_001232328.1| eukaryotic initiation factor 4A-III [Taeniopygia guttata]
 gi|251764757|sp|B5FZY7.1|IF4A3_TAEGU RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|197128100|gb|ACH44598.1| putative DEAD box polypeptide 48 [Taeniopygia guttata]
          Length = 410

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 44  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 102

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 103 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 161

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 162 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 221

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 222 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 271

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 272 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 331

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 332 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 385


>gi|251764758|sp|B7ZTW1.1|IF4A3_XENTR RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|213624377|gb|AAI71014.1| hypothetical protein LOC100135173 [Xenopus (Silurana) tropicalis]
          Length = 415

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L + + + 
Sbjct: 49  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVL-QCLDIQ 107

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R +     +V G
Sbjct: 108 VRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 166

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q+ ++SAT  
Sbjct: 167 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLP 226

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 227 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 276

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 277 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 336

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 337 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 390


>gi|166157858|ref|NP_001107349.1| eukaryotic initiation factor 4A-III [Xenopus (Silurana) tropicalis]
 gi|163916017|gb|AAI57178.1| LOC100135173 protein [Xenopus (Silurana) tropicalis]
          Length = 415

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L + + + 
Sbjct: 49  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVL-QCLDIQ 107

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R +     +V G
Sbjct: 108 VRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 166

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q+ ++SAT  
Sbjct: 167 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLP 226

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 227 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 276

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 277 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 336

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 337 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 390


>gi|440911177|gb|ELR60885.1| Eukaryotic initiation factor 4A-III, partial [Bos grunniens mutus]
          Length = 407

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 46  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 104

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 105 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 163

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 164 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 223

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 224 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 273

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 274 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 333

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 334 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 387


>gi|417400467|gb|JAA47178.1| Putative atp-dependent rna helicase [Desmodus rotundus]
          Length = 411

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|395517245|ref|XP_003762789.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Sarcophilus
           harrisii]
          Length = 411

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|405122988|gb|AFR97753.1| DEAD box polypeptide 48 [Cryptococcus neoformans var. grubii H99]
          Length = 401

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 128/354 (36%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   I   
Sbjct: 35  LKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQS-IDTN 93

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+AVQI  VV ++G ++ N+     IGGT V    R +    Q+V G
Sbjct: 94  LRETQALVLSPTRELAVQIQTVVLALGDYM-NVSCHACIGGTSVGEDIRKLEAGQQVVSG 152

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ I+DE+D+L+N GF + I  IY  LPP  Q++VVSAT  
Sbjct: 153 TPGRVFDMIRRRNLRTKDIKMLILDESDELLNKGFKDQIYDIYRYLPPATQVVVVSATLP 212

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           HD L    K+M DP+ I  +     L G+KQ    + +          E+ K   L  L 
Sbjct: 213 HDVLEMTTKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTLCDLY 262

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G+ R+L+
Sbjct: 263 DTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLI 322

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ + +
Sbjct: 323 TTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKGVAINFVTVDDV 376


>gi|449298229|gb|EMC94246.1| hypothetical protein BAUCODRAFT_74497 [Baudoinia compniacensis UAMH
           10762]
          Length = 387

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 131/385 (34%), Positives = 215/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 15  FESMHLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL- 72

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 73  QVIDTAVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTNVGEDIRKLDYG 131

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 132 QHVVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 191

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 192 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 241

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + + +ANF    + G   QK R   +  F++G
Sbjct: 242 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGEMPQKERDGIMGEFRQG 301

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 302 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 361

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 362 ----RILRDIELYYSTQIDEMPMNV 382


>gi|114794876|pdb|2J0Q|A Chain A, The Crystal Structure Of The Exon Junction Complex At 3.2
           A Resolution
 gi|114794877|pdb|2J0Q|B Chain B, The Crystal Structure Of The Exon Junction Complex At 3.2
           A Resolution
 gi|116668327|pdb|2J0S|A Chain A, The Crystal Structure Of The Exon Junction Complex At 2.2
           A Resolution
          Length = 410

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 44  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 102

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 103 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 161

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 162 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 221

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 222 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 271

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 272 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 331

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 332 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 385


>gi|7661920|ref|NP_055555.1| eukaryotic initiation factor 4A-III [Homo sapiens]
 gi|388454250|ref|NP_001253345.1| eukaryotic initiation factor 4A-III [Macaca mulatta]
 gi|297701955|ref|XP_002827960.1| PREDICTED: eukaryotic initiation factor 4A-III [Pongo abelii]
 gi|332263899|ref|XP_003280987.1| PREDICTED: eukaryotic initiation factor 4A-III [Nomascus
           leucogenys]
 gi|402901289|ref|XP_003913583.1| PREDICTED: eukaryotic initiation factor 4A-III [Papio anubis]
 gi|426346474|ref|XP_004040902.1| PREDICTED: eukaryotic initiation factor 4A-III [Gorilla gorilla
           gorilla]
 gi|20532400|sp|P38919.4|IF4A3_HUMAN RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           initiation factor 4A-like NUK-34; AltName:
           Full=Eukaryotic translation initiation factor 4A isoform
           3; AltName: Full=Nuclear matrix protein 265; Short=NMP
           265; Short=hNMP 265
 gi|295982193|pdb|2XB2|A Chain A, Crystal Structure Of The Core Mago-Y14-Eif4aiii-Barentsz-
           Upf3b Assembly Shows How The Ejc Is Bridged To The Nmd
           Machinery
 gi|295982194|pdb|2XB2|X Chain X, Crystal Structure Of The Core Mago-Y14-Eif4aiii-Barentsz-
           Upf3b Assembly Shows How The Ejc Is Bridged To The Nmd
           Machinery
 gi|13177790|gb|AAH03662.1| Eukaryotic translation initiation factor 4A, isoform 3 [Homo
           sapiens]
 gi|13325146|gb|AAH04386.1| Eukaryotic translation initiation factor 4A, isoform 3 [Homo
           sapiens]
 gi|15029856|gb|AAH11151.1| Eukaryotic translation initiation factor 4A, isoform 3 [Homo
           sapiens]
 gi|48145617|emb|CAG33031.1| DDX48 [Homo sapiens]
 gi|60655857|gb|AAX32492.1| DEAD-box polypeptide 48 [synthetic construct]
 gi|119609990|gb|EAW89584.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 48, isoform CRA_a [Homo
           sapiens]
 gi|119609991|gb|EAW89585.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 48, isoform CRA_a [Homo
           sapiens]
 gi|158254648|dbj|BAF83297.1| unnamed protein product [Homo sapiens]
 gi|168274374|dbj|BAG09607.1| eukaryotic initiation factor 4A-III [synthetic construct]
 gi|380818394|gb|AFE81070.1| eukaryotic initiation factor 4A-III [Macaca mulatta]
 gi|383413381|gb|AFH29904.1| eukaryotic initiation factor 4A-III [Macaca mulatta]
 gi|384941680|gb|AFI34445.1| eukaryotic initiation factor 4A-III [Macaca mulatta]
 gi|410223764|gb|JAA09101.1| eukaryotic translation initiation factor 4A3 [Pan troglodytes]
 gi|410300718|gb|JAA28959.1| eukaryotic translation initiation factor 4A3 [Pan troglodytes]
          Length = 411

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|114051321|ref|NP_001039653.1| eukaryotic initiation factor 4A-III [Bos taurus]
 gi|154147644|ref|NP_001093663.1| eukaryotic initiation factor 4A-III [Sus scrofa]
 gi|157821621|ref|NP_001093628.1| eukaryotic initiation factor 4A-III [Rattus norvegicus]
 gi|344291096|ref|XP_003417272.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Loxodonta
           africana]
 gi|348558064|ref|XP_003464838.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Cavia
           porcellus]
 gi|403280419|ref|XP_003931716.1| PREDICTED: eukaryotic initiation factor 4A-III [Saimiri boliviensis
           boliviensis]
 gi|426238395|ref|XP_004013140.1| PREDICTED: eukaryotic initiation factor 4A-III [Ovis aries]
 gi|109825494|sp|Q2NL22.3|IF4A3_BOVIN RecName: Full=Eukaryotic initiation factor 4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|123780398|sp|Q3B8Q2.1|IF4A3_RAT RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|251764755|sp|A6M931.1|IF4A3_PIG RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|77748037|gb|AAI05876.1| Eukaryotic translation initiation factor 4A, isoform 3 [Rattus
           norvegicus]
 gi|84708898|gb|AAI11185.1| Eukaryotic translation initiation factor 4A, isoform 3 [Bos taurus]
 gi|85792296|gb|ABC84196.1| eukaryotic translation initiation factor 4A isoform 3 [Sus scrofa]
 gi|149054966|gb|EDM06783.1| rCG33565, isoform CRA_a [Rattus norvegicus]
 gi|296476097|tpg|DAA18212.1| TPA: eukaryotic initiation factor 4A-III [Bos taurus]
 gi|351694680|gb|EHA97598.1| Eukaryotic initiation factor 4A-III [Heterocephalus glaber]
 gi|431908688|gb|ELK12280.1| Eukaryotic initiation factor 4A-III [Pteropus alecto]
          Length = 411

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|387016462|gb|AFJ50350.1| Eukaryotic initiation factor 4A-III [Crotalus adamanteus]
          Length = 410

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 44  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 102

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 103 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 161

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 162 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 221

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 222 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 271

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 272 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 331

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 332 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 385


>gi|355685729|gb|AER97829.1| eukaryotic translation initiation factor 4A, isoform 3 [Mustela
           putorius furo]
          Length = 411

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 46  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 104

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 105 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 163

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 164 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 223

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 224 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 273

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 274 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 333

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 334 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 387


>gi|114794629|pdb|2HYI|C Chain C, Structure Of The Human Exon Junction Complex With A
           Trapped Dead-Box Helicase Bound To Rna
 gi|114794633|pdb|2HYI|I Chain I, Structure Of The Human Exon Junction Complex With A
           Trapped Dead-Box Helicase Bound To Rna
 gi|217035449|pdb|3EX7|C Chain C, The Crystal Structure Of Ejc In Its Transition State
 gi|217035453|pdb|3EX7|H Chain H, The Crystal Structure Of Ejc In Its Transition State
          Length = 413

 Score =  219 bits (557), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|116668333|pdb|2J0U|B Chain B, The Crystal Structure Of Eif4aiii-Barentsz Complex At 3.0
           A Resolution
          Length = 374

 Score =  218 bits (556), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L + + + 
Sbjct: 8   LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVL-QCLDIQ 66

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQ+   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 67  VRETQALILAPTRELAVQVQKGLLALGDYM-NVQSHACIGGTNVGEDIRKLDYGQHVVAG 125

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 126 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 185

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 186 HEVLEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 235

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 236 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 295

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ +  V  + +
Sbjct: 296 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAVNFVKNDDI 349


>gi|156405006|ref|XP_001640523.1| predicted protein [Nematostella vectensis]
 gi|156227658|gb|EDO48460.1| predicted protein [Nematostella vectensis]
          Length = 407

 Score =  218 bits (556), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 126/366 (34%), Positives = 207/366 (56%), Gaps = 20/366 (5%)

Query: 17  NIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           +++VL   D + + + + +G+   GF K S IQ  A   +L G D I Q++SGTGK+  F
Sbjct: 29  DVEVLPTFDAMKLREDLLRGIYAYGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATF 88

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK 135
            ++ L + I   +++PQ ++L+PTRE+A QI  VV ++G ++ ++     IGGT +    
Sbjct: 89  SISVL-QAIDTQLREPQALVLSPTRELANQIQKVVLALGDYM-SVQCHACIGGTNIGEDI 146

Query: 136 RPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           R +     IV G+PGR+  MI+ + L   S+++ ++DEAD+++N GF E I  +Y  LPP
Sbjct: 147 RKLDYGQHIVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPP 206

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
             Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            
Sbjct: 207 ATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER---------- 256

Query: 252 EEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           EE K   L  L       Q VIF N + + + + E +  ANF    + G   QK R A +
Sbjct: 257 EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIM 316

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G+ R+L++TD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  
Sbjct: 317 KDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF 376

Query: 369 VSAESL 374
           V ++ +
Sbjct: 377 VKSDDI 382


>gi|389629430|ref|XP_003712368.1| ATP-dependent RNA helicase fal-1 [Magnaporthe oryzae 70-15]
 gi|152032454|sp|A4QU31.1|FAL1_MAGO7 RecName: Full=ATP-dependent RNA helicase FAL1
 gi|351644700|gb|EHA52561.1| ATP-dependent RNA helicase fal-1 [Magnaporthe oryzae 70-15]
 gi|440465456|gb|ELQ34776.1| ATP-dependent RNA helicase fal-1 [Magnaporthe oryzae Y34]
 gi|440487675|gb|ELQ67450.1| ATP-dependent RNA helicase fal-1 [Magnaporthe oryzae P131]
          Length = 401

 Score =  218 bits (556), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 133/385 (34%), Positives = 214/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 29  FESMALKESLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 86

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 87  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 145

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 146 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVV 205

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    I +          E+ K  
Sbjct: 206 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAIEK----------EDWKFD 255

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 256 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 315

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 316 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 375

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 376 ----RILRDIELYYSTQIDEMPMNV 396


>gi|73964736|ref|XP_533130.2| PREDICTED: eukaryotic initiation factor 4A-III isoform 1 [Canis
           lupus familiaris]
          Length = 411

 Score =  218 bits (556), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|346471399|gb|AEO35544.1| hypothetical protein [Amblyomma maculatum]
          Length = 401

 Score =  218 bits (556), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 205/376 (54%), Gaps = 28/376 (7%)

Query: 15  LSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQS 65
           LSN++     DV +          + + +G+   GF K S IQ  +   V+ G D I Q+
Sbjct: 13  LSNVEFETSEDVEVIPTFDAIGLREDLLRGIYAYGFEKPSAIQQRSIKPVIKGRDVIAQA 72

Query: 66  KSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF 125
           +SGTGK+  F +  L + I   +++ Q +IL+PTRE+AVQI  V+ ++G ++ N+     
Sbjct: 73  QSGTGKTATFSIGVL-QTIDTQMRETQALILSPTRELAVQIQKVILALGDYM-NVQCHAC 130

Query: 126 IGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVED 181
           IGGT +    R +     +V G+PGR+  MIK + L   ++++ I+DEAD+++N GF E 
Sbjct: 131 IGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRNLRTRAIKMLILDEADEMLNKGFKEQ 190

Query: 182 ITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPE 241
           I  +Y  LPP  Q++++SAT  H+ L    K+M +P+ I  +     L G+KQ    +  
Sbjct: 191 IYDVYRYLPPCTQVVLISATLPHEILEMTSKFMTEPVRILVKRDELTLEGIKQFFVAVER 250

Query: 242 CKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
                     EE K   L  L       Q VIF N + + + + E +  ANF    + G 
Sbjct: 251 ----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSEKMREANFTVSSMHGD 300

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
             QK R A +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR
Sbjct: 301 MPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR 360

Query: 359 YGTRGLVITIVSAESL 374
           +G +G+ I  V  + +
Sbjct: 361 FGRKGVAINFVKNDDI 376


>gi|395533289|ref|XP_003768693.1| PREDICTED: eukaryotic initiation factor 4A-III [Sarcophilus
           harrisii]
          Length = 411

 Score =  218 bits (556), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHGCIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|390604050|gb|EIN13441.1| DEAD-domain-containing protein [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 396

 Score =  218 bits (555), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 123/358 (34%), Positives = 202/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLGLKEDLLRGIYAYNFEKPSAIQQRAILPIIQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMVQKERDAIMAEFRGGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTVEDV 371


>gi|443898897|dbj|GAC76230.1| predicted ATP-dependent RNA helicase FAL1 [Pseudozyma antarctica
           T-34]
          Length = 398

 Score =  218 bits (555), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 200/354 (56%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F + S IQ  A   ++ G D I Q++SGTGK+  F ++ L   I   
Sbjct: 32  LKEDLLRGIYAYNFERPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQN-IDTT 90

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+A+QI  VV ++G ++ N+     IGGT V    R +     IV G
Sbjct: 91  LRETQALVLSPTRELAIQIQSVVLALGDYL-NVQCHACIGGTSVGEDIRKLDYGQHIVSG 149

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ ++L   ++++ I+DE+D+L+N GF + I  +Y  LPP  Q++++SAT  
Sbjct: 150 TPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFKDQIYDVYRYLPPATQVVLLSATLP 209

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            D L    K+M DP+ I  +     L G+KQL   + +          EE K   L  L 
Sbjct: 210 QDVLEMTSKFMTDPVRILVKRDELTLEGIKQLFVAVEK----------EEWKFDTLCDLY 259

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +   NF    + G   QK R A +  F++G  R+L+
Sbjct: 260 DTLTITQAVIFCNTRRKVDWLAGKMKENNFQVSSMHGEMQQKERDAIMAEFRQGSSRVLI 319

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID AN+ LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 320 TTDVWARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTLEDV 373


>gi|24645031|ref|NP_649788.2| eIF4AIII [Drosophila melanogaster]
 gi|7299019|gb|AAF54221.1| eIF4AIII [Drosophila melanogaster]
 gi|384475970|gb|AFH89818.1| FI20117p1 [Drosophila melanogaster]
          Length = 399

 Score =  218 bits (555), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 29/385 (7%)

Query: 6   QKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVL 56
           +K A+ +D LSN++     DV +         ++ + +G+   GF K S IQ  +   ++
Sbjct: 3   RKNAQAED-LSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIV 61

Query: 57  NGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAH 116
            G D I Q++SGTGK+  F ++ L  L    +++ Q + L+PTRE+AVQI  V+ ++G  
Sbjct: 62  KGRDVIAQAQSGTGKTATFSISILQSL-DTTLRETQVLCLSPTRELAVQIQKVILALG-D 119

Query: 117 VKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
           + N+     IGGT +    R +     IV G+PGR+  MIK + L   ++++ ++DEAD+
Sbjct: 120 MMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADE 179

Query: 173 LINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           ++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+
Sbjct: 180 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 239

Query: 233 KQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           KQ    +            EE K   L  L       Q VIF N + + + + E +  AN
Sbjct: 240 KQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 289

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y
Sbjct: 290 FTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 349

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  V ++ +
Sbjct: 350 IHRIGRSGRFGRKGVAINFVKSDDI 374


>gi|19528517|gb|AAL90373.1| RE50350p [Drosophila melanogaster]
          Length = 399

 Score =  218 bits (555), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 29/385 (7%)

Query: 6   QKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVL 56
           +K A+ +D LSN++     DV +         ++ + +G+   GF K S IQ  +   ++
Sbjct: 3   RKNAQAED-LSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIV 61

Query: 57  NGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAH 116
            G D I Q++SGTGK+  F ++ L  L    +++ Q + L+PTRE+AVQI  V+ ++G  
Sbjct: 62  KGRDVIAQAQSGTGKTATFSISILQSL-DTTLRETQVLCLSPTRELAVQIQKVILALG-D 119

Query: 117 VKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
           + N+     IGGT +    R +     IV G+PGR+  MIK + L   ++++ ++DEAD+
Sbjct: 120 MMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADE 179

Query: 173 LINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           ++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+
Sbjct: 180 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 239

Query: 233 KQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           KQ    +            EE K   L  L       Q VIF N + + + + E +  AN
Sbjct: 240 KQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 289

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y
Sbjct: 290 FTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 349

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  V ++ +
Sbjct: 350 IHRIGRSGRFGRKGVAINFVKSDDI 374


>gi|367037817|ref|XP_003649289.1| hypothetical protein THITE_2107772 [Thielavia terrestris NRRL 8126]
 gi|346996550|gb|AEO62953.1| hypothetical protein THITE_2107772 [Thielavia terrestris NRRL 8126]
          Length = 401

 Score =  218 bits (555), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 131/385 (34%), Positives = 214/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 29  FESMSLKESLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISML- 86

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 87  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 145

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 146 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVV 205

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 206 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGIKQYFIAVEK----------EDWKFD 255

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 256 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 315

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 316 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 375

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 376 ----RILRDIELYYSTQIDEMPMNV 396


>gi|242791510|ref|XP_002481772.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218718360|gb|EED17780.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 387

 Score =  218 bits (555), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 216/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 17  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 75

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----I 140
              V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R ++    +
Sbjct: 76  DTVVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLEYGQHV 134

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 135 VSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 194

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L 
Sbjct: 195 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLC 244

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 245 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 304

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 305 VLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 361

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 362 -RILRDIELYYSTQIDEMPMNV 382


>gi|395826807|ref|XP_003786606.1| PREDICTED: eukaryotic initiation factor 4A-III [Otolemur garnettii]
          Length = 421

 Score =  218 bits (555), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|74142079|dbj|BAE41100.1| unnamed protein product [Mus musculus]
          Length = 411

 Score =  218 bits (555), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKELIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|302910116|ref|XP_003050220.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731157|gb|EEU44507.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 407

 Score =  218 bits (555), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 214/385 (55%), Gaps = 23/385 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L  + + +G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 34  FESMSLKAENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 92

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 93  QVINIAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDHG 151

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 152 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPATQVVV 211

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 212 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 261

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 262 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 321

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 322 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDV 381

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 382 ----RILRDIELYYSTQIDEMPMNV 402


>gi|195330738|ref|XP_002032060.1| GM23722 [Drosophila sechellia]
 gi|194121003|gb|EDW43046.1| GM23722 [Drosophila sechellia]
          Length = 399

 Score =  218 bits (555), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 29/385 (7%)

Query: 6   QKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVL 56
           +K A+ +D LSN++     DV +         ++ + +G+   GF K S IQ  +   ++
Sbjct: 3   RKNAQAED-LSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIV 61

Query: 57  NGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAH 116
            G D I Q++SGTGK+  F ++ L  L    +++ Q + L+PTRE+AVQI  V+ ++G  
Sbjct: 62  KGRDVIAQAQSGTGKTATFSISILQSL-DTTLRETQILCLSPTRELAVQIQKVILALG-D 119

Query: 117 VKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
           + N+     IGGT +    R +     IV G+PGR+  MIK + L   ++++ ++DEAD+
Sbjct: 120 MMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADE 179

Query: 173 LINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           ++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+
Sbjct: 180 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 239

Query: 233 KQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           KQ    +            EE K   L  L       Q VIF N + + + + E +  AN
Sbjct: 240 KQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 289

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y
Sbjct: 290 FTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 349

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  V ++ +
Sbjct: 350 IHRIGRSGRFGRKGVAINFVKSDDI 374


>gi|295660379|ref|XP_002790746.1| ATP-dependent RNA helicase FAL1 [Paracoccidioides sp. 'lutzii'
           Pb01]
 gi|226281299|gb|EEH36865.1| ATP-dependent RNA helicase FAL1 [Paracoccidioides sp. 'lutzii'
           Pb01]
          Length = 408

 Score =  218 bits (554), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 127/384 (33%), Positives = 215/384 (55%), Gaps = 23/384 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              +++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     +
Sbjct: 88  DTVLRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDHGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNLTG 401
             ++ +I L ++  +  +P N T 
Sbjct: 374 -RILRDIELYYSTQIDEMPMNGTA 396


>gi|403418851|emb|CCM05551.1| predicted protein [Fibroporia radiculosa]
          Length = 396

 Score =  218 bits (554), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 127/377 (33%), Positives = 209/377 (55%), Gaps = 24/377 (6%)

Query: 5   IQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQ 64
           I + + T  V+S  D     D+ +++ + +G+    F K S IQ  A   ++ G D I Q
Sbjct: 12  IFESSETVSVVSTFD-----DLGLKEDLLRGIYAYNFEKPSAIQQRAILPIIQGRDVIAQ 66

Query: 65  SKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDY 124
           ++SGTGK+  F ++ L   I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+    
Sbjct: 67  AQSGTGKTATFSISILQS-IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHA 124

Query: 125 FIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVE 180
            IGGT +    R ++    +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF +
Sbjct: 125 CIGGTSIGEDIRKLEYGQHVVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKD 184

Query: 181 DITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIP 240
            I  +Y  LPP  Q++++SAT  +D L    K+M DP+ I  +     L G+KQ    + 
Sbjct: 185 QIYDVYRYLPPATQVVLLSATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVE 244

Query: 241 ECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
           +          E+ K   L  L       Q VIF N + + + + E +  ANF    + G
Sbjct: 245 K----------EDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHG 294

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
              QK R A +  F+ G  R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+G
Sbjct: 295 EMVQKERDAIMAEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSG 354

Query: 358 RYGTRGLVITIVSAESL 374
           R+G +G+ I  V+ + +
Sbjct: 355 RFGRKGVAINFVTVDDV 371


>gi|392878106|gb|AFM87885.1| eukaryotic initiation factor [Callorhinchus milii]
          Length = 403

 Score =  218 bits (554), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 37  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCISVL-QCLDIQ 95

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ + +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R +     +V G
Sbjct: 96  VRETRALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 154

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 155 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVILISATLP 214

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 215 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 264

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 265 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 324

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 325 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 378


>gi|194744201|ref|XP_001954583.1| GF18341 [Drosophila ananassae]
 gi|194903996|ref|XP_001980981.1| GG24917 [Drosophila erecta]
 gi|195055753|ref|XP_001994777.1| GH14195 [Drosophila grimshawi]
 gi|195110945|ref|XP_002000040.1| GI24868 [Drosophila mojavensis]
 gi|195391782|ref|XP_002054539.1| GJ24512 [Drosophila virilis]
 gi|195499068|ref|XP_002096791.1| GE25867 [Drosophila yakuba]
 gi|190627620|gb|EDV43144.1| GF18341 [Drosophila ananassae]
 gi|190652684|gb|EDV49939.1| GG24917 [Drosophila erecta]
 gi|193892540|gb|EDV91406.1| GH14195 [Drosophila grimshawi]
 gi|193916634|gb|EDW15501.1| GI24868 [Drosophila mojavensis]
 gi|194152625|gb|EDW68059.1| GJ24512 [Drosophila virilis]
 gi|194182892|gb|EDW96503.1| GE25867 [Drosophila yakuba]
          Length = 399

 Score =  218 bits (554), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 29/385 (7%)

Query: 6   QKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVL 56
           +K A+ +D LSN++     DV +         ++ + +G+   GF K S IQ  +   ++
Sbjct: 3   RKNAQAED-LSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSIKPIV 61

Query: 57  NGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAH 116
            G D I Q++SGTGK+  F ++ L  L    +++ Q + L+PTRE+AVQI  V+ ++G  
Sbjct: 62  KGRDVIAQAQSGTGKTATFSISILQSL-DTTLRETQVLCLSPTRELAVQIQKVILALG-D 119

Query: 117 VKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
           + N+     IGGT +    R +     IV G+PGR+  MIK + L   ++++ ++DEAD+
Sbjct: 120 MMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADE 179

Query: 173 LINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           ++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+
Sbjct: 180 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 239

Query: 233 KQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           KQ    +            EE K   L  L       Q VIF N + + + + E +  AN
Sbjct: 240 KQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 289

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y
Sbjct: 290 FTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 349

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  V ++ +
Sbjct: 350 IHRIGRSGRFGRKGVAINFVKSDDI 374


>gi|326915068|ref|XP_003203843.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Meleagris
           gallopavo]
          Length = 369

 Score =  218 bits (554), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 192/342 (56%), Gaps = 19/342 (5%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPT 99
           GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + V++ Q +ILAPT
Sbjct: 15  GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQALILAPT 73

Query: 100 REIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLK 155
           RE+AVQI   + ++G ++ N+     IGGT V    R +     +V G+PGR+  MI+ +
Sbjct: 74  RELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRR 132

Query: 156 YLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMV 215
            L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M 
Sbjct: 133 SLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMT 192

Query: 216 DPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFS 272
           DP+ I  +     L G+KQ    +            EE K   L  L       Q VIF 
Sbjct: 193 DPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFC 242

Query: 273 NYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAA 332
           N + + + + E +  ANF    + G   QK R + +  F+ G  R+L++TD+ ARG+D  
Sbjct: 243 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 302

Query: 333 NVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
            V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 303 QVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 344


>gi|307169387|gb|EFN62107.1| Eukaryotic initiation factor 4A-III [Camponotus floridanus]
          Length = 402

 Score =  218 bits (554), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 132/390 (33%), Positives = 210/390 (53%), Gaps = 29/390 (7%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAA 51
           MA   ++ A+T+D LSN++     DV +            + +G+   GF K S IQ  +
Sbjct: 1   MADKSRRVAQTED-LSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS 59

Query: 52  FPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVR 111
              ++ G D I Q++SGTGK+  F +A L  L    V++ Q ++L+PTRE+A QI  V+ 
Sbjct: 60  IKPIMKGRDVIAQAQSGTGKTATFSIAILQSL-DTQVRETQVLVLSPTRELATQIQKVIL 118

Query: 112 SVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIM 167
           ++G  + N+     IGGT +    R +     +V G+PGR+  MIK + L   ++++ ++
Sbjct: 119 ALGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVL 177

Query: 168 DEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATR 227
           DE+D+++N GF E I  +Y  LPP  Q+++VSAT  H+ L    K+M DP+ I  +    
Sbjct: 178 DESDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDEL 237

Query: 228 PLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICEN 284
            L G+KQ    +            EE K   L  L       Q VIF N + + + + E 
Sbjct: 238 TLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEK 287

Query: 285 LANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPH 344
           +  ANF    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P+
Sbjct: 288 MREANFTVCSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPN 347

Query: 345 DAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 348 NRELYIHRIGRSGRFGRKGVSINFVKTDDI 377


>gi|341877522|gb|EGT33457.1| hypothetical protein CAEBREN_04727 [Caenorhabditis brenneri]
 gi|341879506|gb|EGT35441.1| hypothetical protein CAEBREN_02938 [Caenorhabditis brenneri]
          Length = 397

 Score =  218 bits (554), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 122/355 (34%), Positives = 199/355 (56%), Gaps = 21/355 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A P +L   D I Q++SGTGK+  F ++ L  L    
Sbjct: 31  LREELLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSL-DTQ 89

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT +    R +     +V G
Sbjct: 90  VRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 148

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   +++L ++DEAD+++N GF E +  IY  LPP  Q++++SAT  
Sbjct: 149 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 208

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQL 259
           H+ L    K+M DP+ I  +     L G+KQ               VD+E+     L+ L
Sbjct: 209 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDKEEWKFDTLIDL 257

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q V+F N + + + + + +  ANF    + G  +QK R   +  F+ G  R+L
Sbjct: 258 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 317

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           ++TD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 318 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 372


>gi|327262701|ref|XP_003216162.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Anolis
           carolinensis]
          Length = 420

 Score =  218 bits (554), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 44  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 102

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 103 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 161

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 162 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 221

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 222 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 271

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 272 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 331

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 332 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 385


>gi|327294865|ref|XP_003232128.1| eukaryotic initiation factor 4A-12 [Trichophyton rubrum CBS 118892]
 gi|326466073|gb|EGD91526.1| eukaryotic initiation factor 4A-12 [Trichophyton rubrum CBS 118892]
          Length = 399

 Score =  217 bits (553), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 217/383 (56%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++
Sbjct: 28  DDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QV 86

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   +++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R ++    
Sbjct: 87  IDTVLRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLEHGQH 145

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  IY  LPP  Q++VVS
Sbjct: 146 VVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDIYRYLPPATQVVVVS 205

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L
Sbjct: 206 ATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTL 255

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  
Sbjct: 256 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 315

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +  
Sbjct: 316 RVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV-- 373

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ +I L ++  +  +P N+
Sbjct: 374 --RILRDIELYYSTQIDEMPMNV 394


>gi|301772834|ref|XP_002921834.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic initiation factor
           4A-III-like [Ailuropoda melanoleuca]
          Length = 417

 Score =  217 bits (553), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 121/342 (35%), Positives = 192/342 (56%), Gaps = 19/342 (5%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPT 99
           GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + V++ Q +ILAPT
Sbjct: 63  GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQALILAPT 121

Query: 100 REIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLK 155
           RE+AVQI   + ++G ++ N+     IGGT V    R +     +V G+PGR+  MI+ +
Sbjct: 122 RELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRR 180

Query: 156 YLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMV 215
            L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M 
Sbjct: 181 SLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMT 240

Query: 216 DPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFS 272
           DP+ I  +     L G+KQ    +            EE K   L  L       Q VIF 
Sbjct: 241 DPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFC 290

Query: 273 NYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAA 332
           N + + + + E +  ANF    + G   QK R + +  F+ G  R+L++TD+ ARG+D  
Sbjct: 291 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 350

Query: 333 NVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
            V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 351 QVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 392


>gi|195452524|ref|XP_002073391.1| GK13178 [Drosophila willistoni]
 gi|194169476|gb|EDW84377.1| GK13178 [Drosophila willistoni]
          Length = 395

 Score =  217 bits (553), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 123/358 (34%), Positives = 199/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N + +++ + +G+   GF K S IQ  +   ++ G D I Q++SGTGK+  F ++ L  L
Sbjct: 25  NAMNLKEELLRGIYAYGFEKPSAIQQRSIKPIVKGRDVIAQAQSGTGKTATFSISILQSL 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
               +++ Q + L+PTRE+AVQI  V+ ++G  + N+     IGGT +    R +     
Sbjct: 85  -DTTLRETQVLCLSPTRELAVQIQKVILALG-DMMNVQCHVCIGGTNLGEDIRKLDYGQH 142

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IV G+PGR+  MIK + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++S
Sbjct: 143 IVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 202

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L
Sbjct: 203 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTL 252

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R   +  F+ G+ 
Sbjct: 253 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQS 312

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 313 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 370


>gi|193669397|ref|XP_001951491.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Acyrthosiphon
           pisum]
          Length = 401

 Score =  217 bits (553), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 130/367 (35%), Positives = 204/367 (55%), Gaps = 22/367 (5%)

Query: 17  NIDVL--FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIV 74
           +++VL  F+N  L E  +R G+   GF + S IQ  A   ++ G D I Q++SGTGK+  
Sbjct: 23  DVEVLTTFDNMKLREDLVR-GIYSYGFERPSAIQQRAIKPMIKGRDVIAQAQSGTGKTAT 81

Query: 75  FVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP 134
           F +A L   I   ++  Q + L+PTRE+AVQI  VV ++G ++ N+     IGGT +   
Sbjct: 82  FSIAMLQS-IDSQLRDTQVLCLSPTRELAVQIQKVVLALGDYL-NVQCHACIGGTNLGED 139

Query: 135 KRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            R +     IV G+PGR+  MI+ K L   +++  ++DEAD+++N GF E I  +Y  LP
Sbjct: 140 LRKLDFGQHIVSGTPGRVFDMIRRKALRTRNIKTLVLDEADEMLNKGFKEQIYDVYRFLP 199

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
           P  Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +           
Sbjct: 200 PATQVILISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER--------- 250

Query: 251 DEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLAS 307
            EE K   L  L       Q VIF + + + + + E +  +NF    + G   QK R A 
Sbjct: 251 -EEWKFDTLCDLYDTLTITQAVIFCSTKRKVDWLTEKMRESNFTVSSMHGDMPQKERDAI 309

Query: 308 LDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVIT 367
           +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I 
Sbjct: 310 MKEFRAGQTRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAIN 369

Query: 368 IVSAESL 374
            V ++ +
Sbjct: 370 FVKSDDI 376


>gi|367024941|ref|XP_003661755.1| hypothetical protein MYCTH_2314668 [Myceliophthora thermophila ATCC
           42464]
 gi|347009023|gb|AEO56510.1| hypothetical protein MYCTH_2314668 [Myceliophthora thermophila ATCC
           42464]
          Length = 401

 Score =  217 bits (553), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 131/385 (34%), Positives = 214/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 29  FESMSLKESLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISML- 86

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 87  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 145

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 146 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVV 205

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 206 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 255

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 256 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 315

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 316 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 375

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 376 ----RILRDIELYYSTQIDEMPMNV 396


>gi|70985190|ref|XP_748101.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Aspergillus fumigatus Af293]
 gi|66845729|gb|EAL86063.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Aspergillus fumigatus Af293]
          Length = 505

 Score =  217 bits (553), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 123/381 (32%), Positives = 212/381 (55%), Gaps = 23/381 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F +  L ++I
Sbjct: 114 DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGIL-QVI 172

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 173 DTVVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 231

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 232 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 291

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 292 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 341

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 342 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 401

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 402 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 458

Query: 378 HSLMGEINLDHAFNVGLVPDN 398
             ++ +I L ++  +  +P N
Sbjct: 459 -RILRDIELYYSTQIDEMPMN 478


>gi|17507121|ref|NP_491703.1| Protein F33D11.10 [Caenorhabditis elegans]
 gi|351058714|emb|CCD66444.1| Protein F33D11.10 [Caenorhabditis elegans]
          Length = 399

 Score =  217 bits (553), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 122/355 (34%), Positives = 198/355 (55%), Gaps = 21/355 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A P +L   D I Q++SGTGK+  F ++ L  L    
Sbjct: 33  LREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSL-DTQ 91

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT +    R +     +V G
Sbjct: 92  VRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 150

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   +++L ++DEAD+++N GF E +  IY  LPP  Q++++SAT  
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 210

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQL 259
           H+ L    K+M DP+ I  +     L G+KQ               VD E+     L+ L
Sbjct: 211 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDREEWKFDTLIDL 259

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q V+F N + + + + + +  ANF    + G  +QK R   +  F+ G  R+L
Sbjct: 260 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 319

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           ++TD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 320 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 374


>gi|409049787|gb|EKM59264.1| hypothetical protein PHACADRAFT_113708 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 396

 Score =  217 bits (553), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 122/358 (34%), Positives = 202/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLGLKEDLLRGIYAYNFEKPSAIQQRAILPIIQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMVQKERDAIMAEFRSGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|119182910|ref|XP_001242554.1| hypothetical protein CIMG_06450 [Coccidioides immitis RS]
          Length = 388

 Score =  217 bits (553), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 125/378 (33%), Positives = 211/378 (55%), Gaps = 23/378 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF   S IQ  A   +  G D I Q++SGTGK+  F ++ L ++I   
Sbjct: 3   LKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISIL-QVIDTA 61

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+A QI +V+ +VG ++ N+     IGGT V    R +     +V G
Sbjct: 62  LRETQALVLSPTRELATQIQNVIMAVGDYM-NVQCHACIGGTNVGDDIRKLDHGQHVVSG 120

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ ++L    +++ ++DEAD L+  GF E I  +Y  LPP  Q++V+SAT  
Sbjct: 121 TPGRVADMIRRRHLRTRHIKMLVLDEADDLLARGFREQIYDVYRYLPPATQVVVLSATLP 180

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           +D L+   K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 181 YDVLSMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLCDLY 230

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R+L+
Sbjct: 231 DTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLI 290

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           +TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +     +
Sbjct: 291 STDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV----RI 346

Query: 381 MGEINLDHAFNVGLVPDN 398
           + +I L ++  +  +P N
Sbjct: 347 LRDIELYYSTQIDEMPMN 364


>gi|71995724|ref|NP_490761.2| Protein Y65B4A.6 [Caenorhabditis elegans]
 gi|373220069|emb|CCD71923.1| Protein Y65B4A.6 [Caenorhabditis elegans]
          Length = 399

 Score =  217 bits (552), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 122/355 (34%), Positives = 198/355 (55%), Gaps = 21/355 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A P +L   D I Q++SGTGK+  F ++ L  L    
Sbjct: 33  LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSL-DTQ 91

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT +    R +     +V G
Sbjct: 92  VRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 150

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   +++L ++DEAD+++N GF E +  IY  LPP  Q++++SAT  
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 210

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQL 259
           H+ L    K+M DP+ I  +     L G+KQ               VD E+     L+ L
Sbjct: 211 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDREEWKFDTLIDL 259

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q V+F N + + + + + +  ANF    + G  +QK R   +  F+ G  R+L
Sbjct: 260 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 319

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           ++TD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 320 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 374


>gi|449549953|gb|EMD40918.1| hypothetical protein CERSUDRAFT_111502 [Ceriporiopsis subvermispora
           B]
          Length = 396

 Score =  217 bits (552), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 122/358 (34%), Positives = 202/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLGLKEDLLRGIYAYNFEKPSAIQQRAILPIIQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMVQKERDAIMAEFRSGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|343961095|dbj|BAK62137.1| probable ATP-dependent RNA helicase DDX48 [Pan troglodytes]
          Length = 411

 Score =  217 bits (552), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +VVG
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVVG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++    +HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELSIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|302696869|ref|XP_003038113.1| hypothetical protein SCHCODRAFT_63532 [Schizophyllum commune H4-8]
 gi|300111810|gb|EFJ03211.1| hypothetical protein SCHCODRAFT_63532 [Schizophyllum commune H4-8]
          Length = 396

 Score =  217 bits (552), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 123/358 (34%), Positives = 202/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   +  G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLNLKEDLLRGIYAYNFEKPSAIQQRAILPITQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSVGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L   QK+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTQKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  +NF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRQSNFTVSSMHGEMVQKERDAIMAEFRAGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|125775187|ref|XP_001358845.1| GA20384 [Drosophila pseudoobscura pseudoobscura]
 gi|195144826|ref|XP_002013397.1| GL23429 [Drosophila persimilis]
 gi|54638586|gb|EAL27988.1| GA20384 [Drosophila pseudoobscura pseudoobscura]
 gi|194102340|gb|EDW24383.1| GL23429 [Drosophila persimilis]
          Length = 399

 Score =  217 bits (552), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 29/385 (7%)

Query: 6   QKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVL 56
           +K A+ +D LSN++     DV +         ++ + +G+   GF K S IQ  +   ++
Sbjct: 3   RKNAQAED-LSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSIKPIV 61

Query: 57  NGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAH 116
            G D I Q++SGTGK+  F ++ L  L    +++ Q + L+PTRE+AVQI  V+ ++G  
Sbjct: 62  KGRDVIAQAQSGTGKTATFSISILQSL-DTTLRETQVLCLSPTRELAVQIQKVILALG-D 119

Query: 117 VKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
           + N+     IGGT +    R +     IV G+PGR+  MIK + L   ++++ ++DEAD+
Sbjct: 120 MMNVLCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADE 179

Query: 173 LINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           ++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+
Sbjct: 180 MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 239

Query: 233 KQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           KQ    +            EE K   L  L       Q VIF N + + + + E +  AN
Sbjct: 240 KQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 289

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y
Sbjct: 290 FTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 349

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  V ++ +
Sbjct: 350 IHRIGRSGRFGRKGVAINFVKSDDI 374


>gi|73620773|sp|Q4R3Q1.3|IF4A3_MACFA RecName: Full=Eukaryotic initiation factor 4A-III;
           Short=eIF-4A-III; Short=eIF4A-III; AltName:
           Full=ATP-dependent RNA helicase DDX48; AltName:
           Full=ATP-dependent RNA helicase eIF4A-3; AltName:
           Full=DEAD box protein 48; AltName: Full=Eukaryotic
           translation initiation factor 4A isoform 3
 gi|67971846|dbj|BAE02265.1| unnamed protein product [Macaca fascicularis]
          Length = 411

 Score =  217 bits (552), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAP RE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPARELAVQIQKGLLTLGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|14209673|gb|AAK56848.1|AF217001_1 DEAD-box corepressor DP103 beta [Mus musculus]
          Length = 505

 Score =  217 bits (552), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 129/278 (46%), Positives = 169/278 (60%), Gaps = 11/278 (3%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DV+      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 44  AHDIGGPRTRTGDVVLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 102

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 103 LIVQAKSGTGKTCVFSTIALDSLI-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGL 161

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 162 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 221

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 222 SFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 281

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFS 272
            ++     P    + EEK   L +L S+ PFNQ ++FS
Sbjct: 282 QVV--NSYPLAHKIFEEKTQHLQELFSKVPFNQALVFS 317


>gi|388583242|gb|EIM23544.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
          Length = 394

 Score =  217 bits (552), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 137/386 (35%), Positives = 209/386 (54%), Gaps = 24/386 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           F+   L E  IR G+    F K S IQ  A   +  G D I QS+SGTGK+  F ++AL 
Sbjct: 23  FDKMGLKEDLIR-GIYAYNFEKPSAIQQRAIVPITKGRDVIAQSQSGTGKTGSFAISAL- 80

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           + I   ++  Q ++L+PTRE+A QI  VV ++G ++ ++     IGGT V    R +   
Sbjct: 81  QTIDTNIRDTQALVLSPTRELATQIQSVVLALGDYM-SVQCHACIGGTSVGEDIRKLDYG 139

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L   ++++ I+DEAD+L+N GF + I  IY  LPP  Q+++
Sbjct: 140 QHVVSGTPGRVYDMIRRRNLRTRNIKMLILDEADELLNLGFKDQIYDIYRYLPPATQVVL 199

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
            SAT  HD L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 200 FSATLPHDVLEMTTKFMTDPIRILVKRDEITLEGIKQFFVAVEK----------EEWKFD 249

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E +  ANF    + G   QK R   ++ F+ G
Sbjct: 250 TLCDLYDTLTITQAVIFCNTRKKVDWLTEKMREANFTVSSMHGEMPQKERDGIMNEFRGG 309

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 310 NSRVLITTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTVEDV 369

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNLT 400
                ++ +I   +A  +  +P NLT
Sbjct: 370 ----RILRDIEQYYATQIDEMPLNLT 391


>gi|322698074|gb|EFY89847.1| eukaryotic initiation factor 4A-12 [Metarhizium acridum CQMa 102]
          Length = 402

 Score =  217 bits (552), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 256

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 257 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 316

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 317 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDV 376

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 377 ----RILRDIELYYSTQIDEMPMNV 397


>gi|296817029|ref|XP_002848851.1| eukaryotic initiation factor 4A-12 [Arthroderma otae CBS 113480]
 gi|302506162|ref|XP_003015038.1| hypothetical protein ARB_06798 [Arthroderma benhamiae CBS 112371]
 gi|238839304|gb|EEQ28966.1| eukaryotic initiation factor 4A-12 [Arthroderma otae CBS 113480]
 gi|291178609|gb|EFE34398.1| hypothetical protein ARB_06798 [Arthroderma benhamiae CBS 112371]
 gi|326469057|gb|EGD93066.1| eukaryotic initiation factor 4A-12 [Trichophyton tonsurans CBS
           112818]
 gi|326480615|gb|EGE04625.1| eukaryotic initiation factor 4A-12 [Trichophyton equinum CBS
           127.97]
          Length = 399

 Score =  217 bits (552), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 126/383 (32%), Positives = 217/383 (56%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++
Sbjct: 28  DDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QV 86

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   +++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R ++    
Sbjct: 87  IDTVLRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLEHGQH 145

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVS
Sbjct: 146 VVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVS 205

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L
Sbjct: 206 ATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTL 255

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  
Sbjct: 256 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 315

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +  
Sbjct: 316 RVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV-- 373

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ +I L ++  +  +P N+
Sbjct: 374 --RILRDIELYYSTQIDEMPMNV 394


>gi|303319503|ref|XP_003069751.1| Eukaryotic translation initiation factor, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|142985565|sp|Q1DTB3.2|FAL1_COCIM RecName: Full=ATP-dependent RNA helicase FAL1
 gi|240109437|gb|EER27606.1| Eukaryotic translation initiation factor, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320040787|gb|EFW22720.1| ATP-dependent RNA helicase FAL1 [Coccidioides posadasii str.
           Silveira]
 gi|392865454|gb|EAS31245.2| ATP-dependent RNA helicase FAL1 [Coccidioides immitis RS]
          Length = 399

 Score =  216 bits (551), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 126/383 (32%), Positives = 215/383 (56%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   GF   S IQ  A   +  G D I Q++SGTGK+  F ++ L ++
Sbjct: 28  DDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISIL-QV 86

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
           I   +++ Q ++L+PTRE+A QI +V+ +VG ++ N+     IGGT V    R +     
Sbjct: 87  IDTALRETQALVLSPTRELATQIQNVIMAVGDYM-NVQCHACIGGTNVGDDIRKLDHGQH 145

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ ++L    +++ ++DEAD L+  GF E I  +Y  LPP  Q++V+S
Sbjct: 146 VVSGTPGRVADMIRRRHLRTRHIKMLVLDEADDLLARGFREQIYDVYRYLPPATQVVVLS 205

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L+   K+M DP+ I  +     L G+KQ    + +          EE K   L
Sbjct: 206 ATLPYDVLSMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTL 255

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  
Sbjct: 256 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 315

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +  
Sbjct: 316 RVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV-- 373

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ +I L ++  +  +P N+
Sbjct: 374 --RILRDIELYYSTQIDEMPMNV 394


>gi|324517616|gb|ADY46875.1| Eukaryotic initiation factor 4A-III, partial [Ascaris suum]
          Length = 405

 Score =  216 bits (551), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 123/359 (34%), Positives = 201/359 (55%), Gaps = 21/359 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + + + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F ++ L  L
Sbjct: 35  DDMGLREELIRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQAQSGTGKTATFSISVLQGL 94

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
               +++ Q +IL+PTRE+A QI  V+ ++G ++ N+     IGGT V    R +     
Sbjct: 95  -NTTIRETQALILSPTRELASQIQKVILALGDYM-NVQCHACIGGTNVGEDIRKLDYGQH 152

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   S+R+ ++DEAD+++N GF E +  IY  LPP  Q++++S
Sbjct: 153 VVSGTPGRVFDMIRRRNLRTRSIRMLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLS 212

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----K 255
           AT  H+ L    K+M +P+ I  +     L G+KQ               VD E+     
Sbjct: 213 ATLPHEILEMTSKFMTNPIRILVKRDELTLEGIKQFFVA-----------VDREEWKFDT 261

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L  L       Q VIF N + + + + E L  ANF    + G  +QK R A +  F+ G 
Sbjct: 262 LCDLYDTLTITQAVIFCNTRRKVDWLAEKLKEANFTVSAMHGDMEQKERDAIVKEFRSGT 321

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
            R+L++TD+ ARG+D   V LV+N ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 322 SRLLISTDVFARGLDIPQVSLVVNYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 380


>gi|341880612|gb|EGT36547.1| hypothetical protein CAEBREN_03643 [Caenorhabditis brenneri]
 gi|341891026|gb|EGT46961.1| hypothetical protein CAEBREN_07283 [Caenorhabditis brenneri]
          Length = 403

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 122/355 (34%), Positives = 199/355 (56%), Gaps = 21/355 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A P +L   D I Q++SGTGK+  F ++ L  L    
Sbjct: 37  LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSL-DTQ 95

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT +    R +     +V G
Sbjct: 96  VRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 154

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   +++L ++DEAD+++N GF E +  IY  LPP  Q++++SAT  
Sbjct: 155 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 214

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQL 259
           H+ L    K+M DP+ I  +     L G+KQ               VD+E+     L+ L
Sbjct: 215 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDKEEWKFDTLIDL 263

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q V+F N + + + + + +  ANF    + G  +QK R   +  F+ G  R+L
Sbjct: 264 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 323

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           ++TD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 324 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 378


>gi|255955551|ref|XP_002568528.1| Pc21g15180 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590239|emb|CAP96415.1| Pc21g15180 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 416

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 212/381 (55%), Gaps = 23/381 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKESLLRGVYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISTL-QII 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     +
Sbjct: 88  DTVVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLADKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDN 398
             ++ +I L ++  +  +P N
Sbjct: 374 -RILRDIELYYSTQIDEMPMN 393


>gi|268563240|ref|XP_002638790.1| Hypothetical protein CBG05145 [Caenorhabditis briggsae]
          Length = 400

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 122/355 (34%), Positives = 199/355 (56%), Gaps = 21/355 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A P +L   D I Q++SGTGK+  F ++ L  L    
Sbjct: 34  LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSL-DTQ 92

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT +    R +     +V G
Sbjct: 93  VRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 151

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   +++L ++DEAD+++N GF E +  IY  LPP  Q++++SAT  
Sbjct: 152 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 211

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQL 259
           H+ L    K+M DP+ I  +     L G+KQ               VD+E+     L+ L
Sbjct: 212 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDKEEWKFDTLIDL 260

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q V+F N + + + + + +  ANF    + G  +QK R   +  F+ G  R+L
Sbjct: 261 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGNTRVL 320

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           ++TD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 321 ISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 375


>gi|315049467|ref|XP_003174108.1| ATP-dependent RNA helicase fal1 [Arthroderma gypseum CBS 118893]
 gi|311342075|gb|EFR01278.1| ATP-dependent RNA helicase fal1 [Arthroderma gypseum CBS 118893]
          Length = 403

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 126/383 (32%), Positives = 217/383 (56%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++
Sbjct: 32  DDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QV 90

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   +++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R ++    
Sbjct: 91  IDTVLRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLEHGQH 149

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVS
Sbjct: 150 VVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVS 209

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L
Sbjct: 210 ATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTL 259

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  
Sbjct: 260 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 319

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +  
Sbjct: 320 RVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV-- 377

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ +I L ++  +  +P N+
Sbjct: 378 --RILRDIELYYSTQIDEMPMNV 398


>gi|156052539|ref|XP_001592196.1| eukaryotic initiation factor 4A-12 [Sclerotinia sclerotiorum 1980]
 gi|160385735|sp|A7EM88.1|FAL1_SCLS1 RecName: Full=ATP-dependent RNA helicase fal1
 gi|154704215|gb|EDO03954.1| eukaryotic initiation factor 4A-12 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 399

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 128/382 (33%), Positives = 213/382 (55%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     I
Sbjct: 88  DTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHI 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|392568039|gb|EIW61213.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
          Length = 396

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 124/360 (34%), Positives = 205/360 (56%), Gaps = 23/360 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   +  G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLGLKEDLLRGIYAYNFEKPSAIQQRAILPITQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           AT  +D L    K+M DP+  L+R ++ T  L G+KQ    + +          E+ K  
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVRRDELT--LEGIKQFFVAVEK----------EDWKFD 251

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G
Sbjct: 252 TLCDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMAQKERDAIMAEFRSG 311

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 312 TSRVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|440635915|gb|ELR05834.1| ATP-dependent RNA helicase fal-1 [Geomyces destructans 20631-21]
          Length = 400

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 28  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML- 85

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 86  QVIDTAVRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 144

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 145 QHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 204

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 205 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 254

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 255 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQG 314

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 315 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 374

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 375 ----RILRDIELYYSTQIDEMPMNV 395


>gi|225684976|gb|EEH23260.1| ATP-dependent RNA helicase FAL1 [Paracoccidioides brasiliensis
           Pb03]
 gi|226294288|gb|EEH49708.1| ATP-dependent RNA helicase FAL1 [Paracoccidioides brasiliensis
           Pb18]
          Length = 399

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 215/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              +++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     +
Sbjct: 88  DTVLRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDHGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|340519154|gb|EGR49393.1| predicted protein [Trichoderma reesei QM6a]
          Length = 402

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ I+DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLILDEADELLNKGFREQIYDVYRYLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 256

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 257 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 316

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 317 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDV 376

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 377 ----RILRDIELYYSTQIDEMPMNV 397


>gi|322712791|gb|EFZ04364.1| eukaryotic initiation factor 4A-12 [Metarhizium anisopliae ARSEF
           23]
          Length = 402

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 256

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 257 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 316

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 317 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDV 376

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 377 ----RILRDIELYYSTQIDEMPMNV 397


>gi|67902058|ref|XP_681285.1| hypothetical protein AN8016.2 [Aspergillus nidulans FGSC A4]
 gi|74656894|sp|Q5AUL4.1|FAL1_EMENI RecName: Full=ATP-dependent RNA helicase fal1
 gi|40740448|gb|EAA59638.1| hypothetical protein AN8016.2 [Aspergillus nidulans FGSC A4]
 gi|259480767|tpe|CBF73711.1| TPA: ATP-dependent RNA helicase fal1 (EC 3.6.1.-)
           [Source:UniProtKB/Swiss-Prot;Acc:Q5AUL4] [Aspergillus
           nidulans FGSC A4]
          Length = 399

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 215/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++AL ++I
Sbjct: 29  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISAL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 88  DTVVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|169860811|ref|XP_001837040.1| ATP-dependent RNA helicase FAL1 [Coprinopsis cinerea okayama7#130]
 gi|116501762|gb|EAU84657.1| ATP-dependent RNA helicase FAL1 [Coprinopsis cinerea okayama7#130]
          Length = 396

 Score =  216 bits (551), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 121/358 (33%), Positives = 202/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLGLKEDLLRGIYAYNFEKPSAIQQRAILPIIQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVILALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  +NF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRASNFTVSSMHGEMVQKERDAIMAEFRSGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVEDV 371


>gi|212534920|ref|XP_002147616.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Talaromyces marneffei ATCC 18224]
 gi|212534922|ref|XP_002147617.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Talaromyces marneffei ATCC 18224]
 gi|242791505|ref|XP_002481771.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|210070015|gb|EEA24105.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Talaromyces marneffei ATCC 18224]
 gi|210070016|gb|EEA24106.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Talaromyces marneffei ATCC 18224]
 gi|218718359|gb|EED17779.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 399

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 216/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----I 140
              V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R ++    +
Sbjct: 88  DTVVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLEYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|392592745|gb|EIW82071.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
          Length = 396

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 123/358 (34%), Positives = 200/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   +  G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLSLKEDLLRGIYAYNFEKPSAIQQRAILPITQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDISVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L    +++ I+DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRALRTRHIKMLILDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMVQKERDAIMAEFRGGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|342884727|gb|EGU84917.1| hypothetical protein FOXB_04498 [Fusarium oxysporum Fo5176]
          Length = 402

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 256

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 257 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 316

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 317 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDV 376

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 377 ----RILRDIELYYSTQIDEMPMNV 397


>gi|310800687|gb|EFQ35580.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
 gi|380493729|emb|CCF33666.1| ATP-dependent RNA helicase FAL1 [Colletotrichum higginsianum]
          Length = 401

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 214/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 29  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 86

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 87  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 145

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 146 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 205

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 206 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 255

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 256 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 315

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 316 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 375

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 376 ----RILRDIELYYSTQIDEMPMNV 396


>gi|46122961|ref|XP_386034.1| hypothetical protein FG05858.1 [Gibberella zeae PH-1]
 gi|91206664|sp|Q4IAA0.1|FAL1_GIBZE RecName: Full=ATP-dependent RNA helicase FAL1
 gi|408394829|gb|EKJ74026.1| hypothetical protein FPSE_05800 [Fusarium pseudograminearum CS3096]
          Length = 401

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 29  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 86

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 87  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 145

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 146 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPATQVVV 205

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 206 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 255

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 256 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 315

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 316 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDV 375

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 376 ----RILRDIELYYSTQIDEMPMNV 396


>gi|358392646|gb|EHK42050.1| hypothetical protein TRIATDRAFT_302339 [Trichoderma atroviride IMI
           206040]
          Length = 402

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 212/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FEAMSLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ I+DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLILDEADELLNKGFREQIYDVYRYLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 256

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 257 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 316

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 317 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDV 376

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 377 ----RILRDIELYYSTQIDEMPMNV 397


>gi|85103782|ref|XP_961600.1| eukaryotic initiation factor 4A-12 [Neurospora crassa OR74A]
 gi|74625334|sp|Q9P735.2|FAL1_NEUCR RecName: Full=ATP-dependent RNA helicase fal-1
 gi|16415977|emb|CAB88547.2| probable translation initiation factor eIF-4A [Neurospora crassa]
 gi|28923147|gb|EAA32364.1| eukaryotic initiation factor 4A-12 [Neurospora crassa OR74A]
 gi|336472689|gb|EGO60849.1| hypothetical protein NEUTE1DRAFT_107425 [Neurospora tetrasperma
           FGSC 2508]
 gi|350294075|gb|EGZ75160.1| putative translation initiation factor eIF-4A [Neurospora
           tetrasperma FGSC 2509]
          Length = 400

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 131/385 (34%), Positives = 214/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 28  FESMSLKESLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML- 85

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 86  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 144

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 145 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVV 204

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 205 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 254

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 255 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 314

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 315 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 374

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 375 ----RILRDIELYYSTQIDEMPMNV 395


>gi|47209111|emb|CAF90069.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 415

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 124/361 (34%), Positives = 197/361 (54%), Gaps = 25/361 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL---- 83
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F V+ L  L    
Sbjct: 41  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQV 100

Query: 84  ---IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV-- 138
                + V++ Q +ILAPTRE+A QI  V+ ++G ++ N+     IGGT V    R +  
Sbjct: 101 SGSTLVQVRETQALILAPTRELAGQIQKVLLALGDYM-NVQCHACIGGTNVGEDIRKLDY 159

Query: 139 --QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
              +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++
Sbjct: 160 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 219

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK- 255
           ++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            EE K 
Sbjct: 220 LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKF 269

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + + + E +  ANF    + G   QK R + +  F+ 
Sbjct: 270 DTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRS 329

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + 
Sbjct: 330 GASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 389

Query: 374 L 374
           +
Sbjct: 390 I 390


>gi|390344939|ref|XP_785431.3| PREDICTED: eukaryotic initiation factor 4A-III-like
           [Strongylocentrotus purpuratus]
          Length = 398

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 128/360 (35%), Positives = 200/360 (55%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           F++  L E  IR G+   GF K S IQ  A   V+ G D I Q++SGTGK+  F ++ L 
Sbjct: 27  FDSLSLREDLIR-GIYAYGFEKPSAIQQRAIKPVVKGRDVIAQAQSGTGKTATFSISIL- 84

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           + +   V++ Q +IL+PTRE+A QI  V+ ++G ++ ++     IGGT V    R +   
Sbjct: 85  QCLDTQVRETQALILSPTRELANQIQKVILALGDYM-SVQCHSCIGGTNVGEDIRKLDFG 143

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q+++
Sbjct: 144 QHVVSGTPGRVFDMIRRRNLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVL 203

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
            SAT  H+ L    K+M DP+ I  +     L G+KQ    +            EE K  
Sbjct: 204 FSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFD 253

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G
Sbjct: 254 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKEREAIMKEFRSG 313

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GRYG +G+ I  V ++ +
Sbjct: 314 ASRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKSDDI 373


>gi|340714648|ref|XP_003395838.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Bombus
           terrestris]
 gi|350410965|ref|XP_003489194.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Bombus
           impatiens]
 gi|383854330|ref|XP_003702674.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Megachile
           rotundata]
          Length = 403

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 208/385 (54%), Gaps = 29/385 (7%)

Query: 6   QKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVL 56
           ++ A+T+D LSN++     DV +            + +G+   GF K S IQ  +   ++
Sbjct: 7   RRVAQTED-LSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSIKPIM 65

Query: 57  NGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAH 116
            G D I Q++SGTGK+  F +A L  L    V++ Q ++L+PTRE+A QI  V+ ++G  
Sbjct: 66  KGRDVIAQAQSGTGKTATFSIAILQSL-DTQVRETQVLVLSPTRELATQIQKVILALGDF 124

Query: 117 VKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
           + N+     IGGT +    R +     +V G+PGR+  MIK + L   ++++ ++DE+D+
Sbjct: 125 M-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDESDE 183

Query: 173 LINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           ++N GF E I  +Y  LPP  Q+++VSAT  H+ L    K+M DP+ I  +     L G+
Sbjct: 184 MLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 243

Query: 233 KQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           KQ    +            EE K   L  L       Q VIF N + + + + E +  AN
Sbjct: 244 KQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 293

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y
Sbjct: 294 FTVCSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 353

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  V  + +
Sbjct: 354 IHRIGRSGRFGRKGVSINFVKTDDI 378


>gi|48136057|ref|XP_393356.1| PREDICTED: eukaryotic initiation factor 4A-III-like isoform 1 [Apis
           mellifera]
 gi|380025932|ref|XP_003696717.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Apis florea]
          Length = 403

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 208/385 (54%), Gaps = 29/385 (7%)

Query: 6   QKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVL 56
           ++ A+T+D LSN++     DV +            + +G+   GF K S IQ  +   ++
Sbjct: 7   RRVAQTED-LSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSIKPIM 65

Query: 57  NGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAH 116
            G D I Q++SGTGK+  F +A L  L    V++ Q ++L+PTRE+A QI  V+ ++G  
Sbjct: 66  KGRDVIAQAQSGTGKTATFSIAILQSL-DTQVRETQVLVLSPTRELATQIQKVILALGDF 124

Query: 117 VKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
           + N+     IGGT +    R +     +V G+PGR+  MIK + L   ++++ ++DE+D+
Sbjct: 125 M-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDESDE 183

Query: 173 LINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           ++N GF E I  +Y  LPP  Q+++VSAT  H+ L    K+M DP+ I  +     L G+
Sbjct: 184 MLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 243

Query: 233 KQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           KQ    +            EE K   L  L       Q VIF N + + + + E +  AN
Sbjct: 244 KQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 293

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y
Sbjct: 294 FTVCSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 353

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  V  + +
Sbjct: 354 IHRIGRSGRFGRKGVSINFVKTDDI 378


>gi|322788219|gb|EFZ14001.1| hypothetical protein SINV_14366 [Solenopsis invicta]
          Length = 423

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 132/390 (33%), Positives = 210/390 (53%), Gaps = 29/390 (7%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAA 51
           MA   ++ A+T+D LSN++     DV +            + +G+   GF K S IQ  +
Sbjct: 22  MAEKSRRVAQTED-LSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRS 80

Query: 52  FPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVR 111
              ++ G D I Q++SGTGK+  F +A L  L    V++ Q ++L+PTRE+A QI  V+ 
Sbjct: 81  IKPIMKGRDVIAQAQSGTGKTATFSIAILQSL-DTQVRETQVLVLSPTRELATQIQKVIL 139

Query: 112 SVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIM 167
           ++G  + N+     IGGT +    R +     +V G+PGR+  MIK + L   ++++ ++
Sbjct: 140 ALGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVL 198

Query: 168 DEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATR 227
           DE+D+++N GF E I  +Y  LPP  Q+++VSAT  H+ L    K+M DP+ I  +    
Sbjct: 199 DESDEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDEL 258

Query: 228 PLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICEN 284
            L G+KQ    +            EE K   L  L       Q VIF N + + + + E 
Sbjct: 259 TLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEK 308

Query: 285 LANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPH 344
           +  ANF    + G   QK R   +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P+
Sbjct: 309 MREANFTVCSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPN 368

Query: 345 DAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 369 NRELYIHRIGRSGRFGRKGVSINFVKTDDI 398


>gi|91087239|ref|XP_975511.1| PREDICTED: similar to eIF4AIII CG7483-PA [Tribolium castaneum]
 gi|270010579|gb|EFA07027.1| hypothetical protein TcasGA2_TC009998 [Tribolium castaneum]
          Length = 404

 Score =  216 bits (550), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 129/360 (35%), Positives = 199/360 (55%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           F+N  L E+ +R G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F +A L 
Sbjct: 33  FKNMHLKEELLR-GVFAYGFEKPSAIQQRAIKPIIKGRDVIAQAQSGTGKTATFSIAILQ 91

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
            L  L  ++ Q + L+PTRE+AVQI  V+ ++G  + N+     IGGT +    R +   
Sbjct: 92  SL-DLQTRETQVLCLSPTRELAVQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYG 149

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L   SV++ ++DEAD+++N GF E I  +Y  LPP  Q+++
Sbjct: 150 QHVVSGTPGRVYDMIRRRALRTRSVKMLVLDEADEMLNKGFKEQIYDVYRFLPPSTQVVL 209

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           +SAT  H+ L    K+M DP+ I  +     L G+KQ    +            EE K  
Sbjct: 210 ISATLPHEILEITSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFD 259

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E +   NF    + G   QK R   +  F+ G
Sbjct: 260 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRENNFTVSSMHGDMPQKERDNIMKEFRSG 319

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           + R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 320 QSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 379


>gi|312377148|gb|EFR24056.1| hypothetical protein AND_11649 [Anopheles darlingi]
          Length = 400

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 122/358 (34%), Positives = 198/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N + + + + +G+   GF K S IQ  +   ++ G D I Q++SGTGK+  F ++ L  +
Sbjct: 30  NSMGLREELLRGIYAYGFEKPSAIQQRSIQPIVKGRDVIAQAQSGTGKTATFSISILQSM 89

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
               +++ Q + L+PTRE+AVQI  V+ ++G  + N+     IGGT +    R +     
Sbjct: 90  -DTTLRETQVLCLSPTRELAVQIQKVILALGDFM-NIQCHACIGGTNLGEDIRKLDYGQH 147

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MIK + L   S+++ ++DEAD+++N GF E I  +Y  LPP  Q++++S
Sbjct: 148 VVSGTPGRVFDMIKRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 207

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L
Sbjct: 208 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTL 257

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R   +  F+ G+ 
Sbjct: 258 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRSGQS 317

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 318 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 375


>gi|429861443|gb|ELA36132.1| eukaryotic initiation factor 4a-12 [Colletotrichum gloeosporioides
           Nara gc5]
          Length = 402

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 214/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 256

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 257 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 316

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 317 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 376

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 377 ----RILRDIELYYSTQIDEMPMNV 397


>gi|402226271|gb|EJU06331.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
          Length = 396

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 201/354 (56%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   +++G D I Q++SGTGK+  F ++ L + I   
Sbjct: 30  LKEDLLRGIYAYNFEKPSAIQQRAIAPIMSGRDVIAQAQSGTGKTATFSISIL-QAIDTS 88

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVG 143
           +++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT V    R ++    +V G
Sbjct: 89  IRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTSVGEDIRKLEYGQHVVSG 147

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ ++L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++V+SAT  
Sbjct: 148 TPGRVFDMIRRRHLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVVLSATLP 207

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L  L 
Sbjct: 208 YDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTLCDLY 257

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +  ANF    + G   QK R A +  F+ G+ R+L+
Sbjct: 258 DTLTITQAVIFCNTRRKVDWLTNKMREANFTVSAMHGEMPQKERDAIMQEFRSGESRVLI 317

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 318 TTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTIDDV 371


>gi|261202786|ref|XP_002628607.1| eukaryotic initiation factor 4A-12 [Ajellomyces dermatitidis
           SLH14081]
 gi|225556973|gb|EEH05260.1| ATP-dependent RNA helicase FAL1 [Ajellomyces capsulatus G186AR]
 gi|239590704|gb|EEQ73285.1| eukaryotic initiation factor 4A-12 [Ajellomyces dermatitidis
           SLH14081]
 gi|239612419|gb|EEQ89406.1| eukaryotic initiation factor 4A-12 [Ajellomyces dermatitidis ER-3]
 gi|240277518|gb|EER41026.1| ATP-dependent RNA helicase FAL1 [Ajellomyces capsulatus H143]
 gi|325093598|gb|EGC46908.1| ATP-dependent RNA helicase FAL1 [Ajellomyces capsulatus H88]
 gi|327355221|gb|EGE84078.1| ATP-dependent RNA helicase FAL1 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 399

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 214/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              +++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     +
Sbjct: 88  DTVLRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDHGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|116199007|ref|XP_001225315.1| eukaryotic initiation factor 4A-12 [Chaetomium globosum CBS 148.51]
 gi|118573324|sp|Q2GWJ5.1|FAL1_CHAGB RecName: Full=ATP-dependent RNA helicase FAL1
 gi|88178938|gb|EAQ86406.1| eukaryotic initiation factor 4A-12 [Chaetomium globosum CBS 148.51]
          Length = 394

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 127/360 (35%), Positives = 202/360 (56%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 29  FESMSLKESLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML- 86

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 87  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 145

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 146 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVV 205

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 206 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 255

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 256 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 315

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 316 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 375


>gi|171693103|ref|XP_001911476.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946500|emb|CAP73301.1| unnamed protein product [Podospora anserina S mat+]
          Length = 488

 Score =  216 bits (549), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/388 (34%), Positives = 213/388 (54%), Gaps = 30/388 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 116 FESMSLKESLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML- 173

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 174 QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 232

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 233 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVV 292

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  HD L    K+M DP+ I  +     L G+KQ              ++  EK+  
Sbjct: 293 VSATLPHDVLTMTTKFMTDPVRILVKRDELTLEGLKQY-------------FIAVEKEDW 339

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F
Sbjct: 340 KFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDF 399

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           ++G  R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ 
Sbjct: 400 RQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTT 459

Query: 372 ESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           E +     ++ +I L ++  +  +P N+
Sbjct: 460 EDV----RILRDIELYYSTQIDEMPMNV 483


>gi|358382338|gb|EHK20010.1| hypothetical protein TRIVIDRAFT_77211 [Trichoderma virens Gv29-8]
          Length = 402

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 212/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FEAMSLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ I+DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLILDEADELLNKGFREQIYDVYRYLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 256

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 257 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 316

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 317 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDV 376

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 377 ----RILRDIELYYSTQIDEMPMNV 397


>gi|268534660|ref|XP_002632461.1| C. briggsae CBR-MEL-46 protein [Caenorhabditis briggsae]
          Length = 935

 Score =  216 bits (549), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 205/368 (55%), Gaps = 20/368 (5%)

Query: 47  IQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQI 106
           +Q  A P  L G D +VQ+KSGTGK++VF V A+  L  L     Q +I+ PTREI+ QI
Sbjct: 40  VQAKAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENL-DLKAHYIQKVIITPTREISTQI 98

Query: 107 TDVVRSVGAHVKNLHVDYFIGGT-----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDS 161
            + VR +        V  + GG       ++  K   QIV+G+PGR+ Q+I++  +++  
Sbjct: 99  KETVRKLTPAGARTSV--YTGGIGHKLNVIDLKKTRPQIVIGTPGRVAQLIRMGAMDISH 156

Query: 162 VRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR 221
           V  F++DEADKL++  F  DI  I + LPP++Q+ V SATY  +    L  ++ D  L+R
Sbjct: 157 VDFFVLDEADKLMDEVFKPDINTIINSLPPIRQVAVFSATYPRNLDLLLSTFLRDAALVR 216

Query: 222 PEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVI 281
                  L+G+KQ V  +P   +P L      + L +LL    + Q ++F +   + E I
Sbjct: 217 FNQDDVQLVGIKQYV--VPNA-HPML------ETLTRLLKSIRYVQALVFCDQISKCEPI 267

Query: 282 CENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLE 341
             +L +    + ++S    QK R  ++D  +  +V+ILV++DL ARGIDA NV+LV+N++
Sbjct: 268 ATHLKSEGLDSTHVSSGMSQKDRQLAVDQLRAKRVKILVSSDLTARGIDADNVNLVVNVD 327

Query: 342 IPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK-FHSLM--GEINLDHAFNVGLVPDN 398
              +  TY HR+GRA R+G  G  IT++  E ++K F +L   G + +    +V  +P +
Sbjct: 328 AAANEETYFHRIGRAARFGAHGAAITLLEDEKVLKGFTALAYRGRVTVKRVGDVDSIPAD 387

Query: 399 LTGDQINW 406
           +  +Q  W
Sbjct: 388 VVKNQEFW 395


>gi|302654809|ref|XP_003019203.1| hypothetical protein TRV_06752 [Trichophyton verrucosum HKI 0517]
 gi|291182911|gb|EFE38558.1| hypothetical protein TRV_06752 [Trichophyton verrucosum HKI 0517]
          Length = 403

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 126/383 (32%), Positives = 217/383 (56%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++
Sbjct: 32  DDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QV 90

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   +++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R ++    
Sbjct: 91  IDTVLRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLEHGQH 149

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVS
Sbjct: 150 VVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVS 209

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L
Sbjct: 210 ATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTL 259

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  
Sbjct: 260 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 319

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +  
Sbjct: 320 RVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV-- 377

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ +I L ++  +  +P N+
Sbjct: 378 --RILRDIELYYSTQIDEMPMNV 398


>gi|452819502|gb|EME26559.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
          Length = 579

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 138/418 (33%), Positives = 219/418 (52%), Gaps = 42/418 (10%)

Query: 10  RTKDVL---SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSK 66
           R++D++    N  + FE D+ +   +  GL+  GF K SP+Q+A+ PY   G D I+Q+K
Sbjct: 113 RSEDIIVKGKNSSLTFE-DMFLSNGLIAGLKICGFEKPSPVQVASIPYARLGCDLIIQAK 171

Query: 67  SGTGKSIVFVVAAL--------NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHV- 117
           SGTGK+ V+ VA L        N  +   V+  Q +I+ PTRE+A Q+  V   +   + 
Sbjct: 172 SGTGKTCVYAVAVLQSLLDSQKNTTLSSSVKSIQAMIIVPTRELAFQVAMVFEQLRRGII 231

Query: 118 ---KN-LHVDYFIGGTQVERP----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDE 169
              KN + +   +GG  ++       +   +V+G+PGRI+ +I    L++  +++ I+DE
Sbjct: 232 ECDKNGIQIVTCVGGISMKHDYHVLSKGFHVVIGTPGRIRNLIDSAILHLQHIQMLIIDE 291

Query: 170 ADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPL 229
           ADKL+ + F +D+  I   LP  KQ+L  SATYS   L+ L + M +P  I   + T   
Sbjct: 292 ADKLLESCFWKDLFAIEQHLPDWKQVLAFSATYSSSVLSKLYRIMKEPRKITVLEQT--- 348

Query: 230 LGVKQLVALIPECKNPSLRYVDEEK------------------KLVQLLSQTPFNQCVIF 271
           L  K  +   P C   SL  +   K                   L+ +  +  F+QC++F
Sbjct: 349 LVEKLSLDRTPLCAETSLCGITHHKAEIQGSWKGEDLFHIQLETLISIFGEFSFHQCLVF 408

Query: 272 SNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDA 331
            N +   +    +L NA F A++ SG  +Q  R      F   K ++L+TTDL +RGID 
Sbjct: 409 CNDKSLLDRYSNSLRNAGFSADFTSGDLNQSIRNEIFQRFYTHKTQVLLTTDLLSRGIDF 468

Query: 332 ANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINLDHA 389
            + +LV+NL+IP    TYLHR GRAGR+G  G  +T+ S+E+L +   L  ++ +D A
Sbjct: 469 VDCNLVVNLDIPKTTETYLHRAGRAGRFGRFGNCVTVYSSETLPEMEQLESQLGIDFA 526


>gi|403338216|gb|EJY68340.1| ATP-dependent RNA helicase eIF4A, putative [Oxytricha trifallax]
          Length = 411

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 136/370 (36%), Positives = 205/370 (55%), Gaps = 25/370 (6%)

Query: 12  KDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           ++ ++N D + E  +D+ +++ + +G+  +GFVK SPIQ      V+ G D I Q++SGT
Sbjct: 26  EEFITNWDEVVESFDDMGLKEGVLRGIYGHGFVKPSPIQQKGILPVIQGKDTIAQAQSGT 85

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F ++ L ++I       Q +I+APTRE+A QI  VV+++G  +  + V   +GGT
Sbjct: 86  GKTGCFTISIL-QIIDTASVNTQALIVAPTRELAQQIAYVVQAIGEFI-GVKVHACVGGT 143

Query: 130 QVERP----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            V       K+ V +VVG+PGR+  M+K  +L  D +R+F +DEAD++++ GF   I  I
Sbjct: 144 VVRDEIRILKQGVHVVVGTPGRVLDMMKKGFLKADHLRVFCLDEADEMLSRGFKTQIQDI 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECK 243
           +  LP   Q+ + SAT   D L   + +M DP  +L++ ED T  L G+KQ    I    
Sbjct: 204 FKYLPAEIQIALFSATMPMDILKLTKHFMRDPAKILVKNEDLT--LEGIKQYYIPIER-- 259

Query: 244 NPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQD 300
                   EE K   L+ L      NQ +I+ N + R   + E +   +F    + G  D
Sbjct: 260 --------EEWKIDILLDLYGNLDINQALIYCNTKKRVMELAELMKEKDFVVSAMHGEMD 311

Query: 301 QKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYG 360
           Q  R   +  F+ G  R+L+TTDL ARGID   V LVIN E+P     Y+HR+GRAGRYG
Sbjct: 312 QITRDMIMKEFRTGSTRVLITTDLMARGIDVQQVSLVINYELPLKKENYIHRIGRAGRYG 371

Query: 361 TRGLVITIVS 370
            +G  I  VS
Sbjct: 372 RKGTAINFVS 381


>gi|422323614|ref|ZP_16404653.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
 gi|317401375|gb|EFV82010.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
          Length = 591

 Score =  216 bits (549), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 212/403 (52%), Gaps = 31/403 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FEN + +   +   LQ+ GF   + +Q +A P  L G+D +V S++G+GK+  F++ AL+
Sbjct: 3   FEN-LGLAPALLSALQDAGFTTPTTVQASAIPQALAGHDLMVSSQTGSGKTAAFMLPALH 61

Query: 82  KLIKLPVQQ---PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERP 134
           ++ ++P  +    Q ++LAPTRE+A+Q+TD   + G  + +L     +GG     Q++  
Sbjct: 62  RIAQMPANKGVGVQVLVLAPTRELALQVTDATATYGRKLADLRTATVVGGMPYGAQLKAL 121

Query: 135 KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
            R V ++V +PGR+   +    + +++V   ++DEAD++++ GF+EDI  I S+LP  +Q
Sbjct: 122 SRRVDVLVATPGRLIDHLNSGRVKLNTVHTLVLDEADRMLDMGFIEDIETIISRLPVERQ 181

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
            L+ SAT          + M DP  I    A      + Q           SL Y D+  
Sbjct: 182 TLLFSATLDGTVAKLAARMMRDPQRIEVAGAKEKHTNITQ-----------SLLYADDAS 230

Query: 255 KLVQLLSQT----PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
             +QLL         +Q ++F++ +   + + ++LA+  F A  L G  +Q+ R  +L  
Sbjct: 231 HKMQLLDHVLRDASLDQAIVFTSTKRGADDLADHLADQGFAAAALHGDMNQRQRTRTLSQ 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +RG++RILV TD+AARGID   +   +N ++P  A  Y+HR+GR GR G  GL  T+ +
Sbjct: 291 LQRGQLRILVATDVAARGIDVQGISHAVNFDLPMQAEDYVHRIGRTGRAGRNGLAFTLAT 350

Query: 371 AESLVKFHSLMGEI-NLDHAFNVGLVPDNLTGDQINWTQRVQT 412
                  HS   ++  ++H     + P+ + G +   T R  T
Sbjct: 351 -------HSERHKVRRIEHYIGQSITPEVIAGLEPKRTPRPST 386


>gi|378727128|gb|EHY53587.1| ATP-dependent RNA helicase fal1 [Exophiala dermatitidis NIH/UT8656]
          Length = 400

 Score =  216 bits (549), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 213/382 (55%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 30  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISIL-QVI 88

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT V    R +     +
Sbjct: 89  DTSVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHV 147

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 148 VSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 207

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L 
Sbjct: 208 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLC 257

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 258 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMSDFRQGNSR 317

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +   
Sbjct: 318 VLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV--- 374

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 375 -RILRDIELYYSTQIDEMPMNV 395


>gi|91206662|sp|Q4WEB4.2|FAL1_ASPFU RecName: Full=ATP-dependent RNA helicase fal1
          Length = 398

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 213/382 (55%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F +  L ++I
Sbjct: 28  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGIL-QVI 86

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 87  DTVVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 145

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 146 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 205

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 206 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 255

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 256 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 315

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 316 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 372

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 373 -RILRDIELYYSTQIDEMPMNV 393


>gi|313217515|emb|CBY38596.1| unnamed protein product [Oikopleura dioica]
 gi|313229431|emb|CBY24018.1| unnamed protein product [Oikopleura dioica]
          Length = 401

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 202/365 (55%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV+   D + I + + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F 
Sbjct: 24  VDVVPTFDSMGIREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQAQSGTGKTATFS 83

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           ++ L +++   V++ Q +IL PTRE+A Q+  V+ ++G ++ N+     IGGT V    R
Sbjct: 84  ISTL-QVLDTSVRETQALILCPTRELAQQVQKVILALGDYM-NVQAHVCIGGTNVGEDIR 141

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +VVG+PGR   MI+ + L   +++L I+DEAD+++N GF E I  +Y  LPP 
Sbjct: 142 KLDFGQHVVVGTPGRTFDMIRRRNLRTRNIKLLILDEADEMLNRGFKEQIYDVYRYLPPA 201

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q+ +VSAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 202 TQVCLVSATLPHEILEMTHKFMSDPIRILVKRDELTLEGIKQFFVAVER----------E 251

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF + + + + + E +  ANF    + G   QK R   + 
Sbjct: 252 EWKFDTLCDLYDTLTITQAVIFCSTKRKVDWLAEKMREANFTVSAMHGDMPQKERNEIMR 311

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G+ R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 312 EFRSGQTRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 371

Query: 370 SAESL 374
             + +
Sbjct: 372 RNDDI 376


>gi|452981941|gb|EME81700.1| hypothetical protein MYCFIDRAFT_78844 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 400

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 131/385 (34%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 28  FEQMSLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL- 85

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT V    R +   
Sbjct: 86  QVIDTAVRETQALVLSPTRELATQIQSVLLALGDYM-NVQCHACIGGTNVGEDIRKLDYG 144

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 145 QHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 204

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 205 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 254

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + + +ANF    + G   QK R A +  F++G
Sbjct: 255 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGEMPQKERDAIMGEFRQG 314

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 315 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 374

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 375 ----RILRDIELYYSTQIDEMPMNV 395


>gi|115437508|ref|XP_001217828.1| eukaryotic initiation factor 4A-12 [Aspergillus terreus NIH2624]
 gi|121734188|sp|Q0CAS8.1|FAL1_ASPTN RecName: Full=ATP-dependent RNA helicase fal1
 gi|114188643|gb|EAU30343.1| eukaryotic initiation factor 4A-12 [Aspergillus terreus NIH2624]
          Length = 399

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 214/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 88  DTVVRESQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|225719342|gb|ACO15517.1| Eukaryotic initiation factor 4A-III [Caligus clemensi]
          Length = 403

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 196/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  +   +L G D I Q++SGTGK+  F ++ L   I   
Sbjct: 37  LREDLLRGIYAYGFEKPSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQS-IDTS 95

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+AVQI  V+ ++G ++ N+     IGGT +    R +     +V G
Sbjct: 96  LRETQCLVLSPTRELAVQIQKVLLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 154

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ ++DEAD+++N GF E I  +Y  LPP  Q+ ++SAT  
Sbjct: 155 TPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQICLISATLP 214

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 215 HEILEMTSKFMADPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 264

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G+ R+L+
Sbjct: 265 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGQSRVLI 324

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 325 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDI 378


>gi|332849248|ref|XP_511724.3| PREDICTED: eukaryotic initiation factor 4A-III [Pan troglodytes]
          Length = 411

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++    +HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELSIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|425772423|gb|EKV10824.1| Eukaryotic translation initiation factor eIF-4A subunit, putative
           [Penicillium digitatum PHI26]
 gi|425775053|gb|EKV13341.1| Eukaryotic translation initiation factor eIF-4A subunit, putative
           [Penicillium digitatum Pd1]
          Length = 399

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 213/382 (55%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISTL-QII 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     +
Sbjct: 88  DTVVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|391347687|ref|XP_003748087.1| PREDICTED: eukaryotic initiation factor 4A-III [Metaseiulus
           occidentalis]
          Length = 401

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 196/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  +   ++ G D I QS+SGTGK+  F +  L K I+  
Sbjct: 35  LREDLLRGIYAYGFEKPSAIQQRSIQPIMKGRDVIAQSQSGTGKTATFSIGVLQK-IETQ 93

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
            ++ Q +IL+PTRE+A+QI  V+ ++G ++ ++     IGGT +    R +     IV G
Sbjct: 94  TRETQVLILSPTRELALQIQKVILALGDYM-SVQCHACIGGTNLAEDIRKLDYGQHIVSG 152

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L    +++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 153 TPGRVFDMIKRRNLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPGTQVVLISATLP 212

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 213 HEILEITNKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 262

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + + +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 263 DTLTITQAVIFCNTKRKVDWLSQKMLEANFTVSSMHGDMPQKERDSIMKEFRSGATRVLI 322

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 323 TTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDI 376


>gi|409079657|gb|EKM80018.1| hypothetical protein AGABI1DRAFT_113249 [Agaricus bisporus var.
           burnettii JB137-S8]
 gi|426198579|gb|EKV48505.1| hypothetical protein AGABI2DRAFT_192108 [Agaricus bisporus var.
           bisporus H97]
          Length = 396

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 121/358 (33%), Positives = 201/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   +  G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLALKEDLLRGIYAYNFEKPSAIQQRAILPITQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  +NF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRASNFTVSSMHGDMVQKERDAIMAEFRSGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|340375903|ref|XP_003386473.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Amphimedon
           queenslandica]
          Length = 407

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 200/365 (54%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV+   D + + + + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F 
Sbjct: 30  VDVVATFDGMNLREDLLRGIYAYGFEKPSAIQQRAIVPIIRGRDVIAQAQSGTGKTATFS 89

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           +A L K   + +++ Q ++++PTRE+A QI  V+ ++G ++ N+     IGGT V    R
Sbjct: 90  IAILQK-TDIQLRETQALVMSPTRELATQIQKVILALGDYM-NVQCHACIGGTNVGEDIR 147

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     IV G+PGR+  MIK + L   S++L ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 148 KLDYGQHIVAGTPGRVFDMIKRRNLRTQSIKLLVLDEADEMLNQGFQEQIYDVYRYLPPS 207

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q+++ SAT   + L   QK+M DP+ +  +     L G+KQ    + +          E
Sbjct: 208 TQVVLASATLPVEILQMTQKFMTDPIQVLVKRDELTLEGIKQFFVAVEK----------E 257

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           + K   L  L       Q VIF N + + E + E +  ANF    + G   QK R   + 
Sbjct: 258 DWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMREANFTVSSMHGDMPQKERETIMK 317

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L+TTD+ ARG+D   V LVIN ++P+    Y+HR+GR+GRYG +G+ I   
Sbjct: 318 EFRAGDSRVLITTDVWARGLDVQQVSLVINYDLPNSRELYIHRIGRSGRYGRKGVAINFA 377

Query: 370 SAESL 374
             + +
Sbjct: 378 KNDDI 382


>gi|258571293|ref|XP_002544450.1| eukaryotic initiation factor 4A-12 [Uncinocarpus reesii 1704]
 gi|237904720|gb|EEP79121.1| eukaryotic initiation factor 4A-12 [Uncinocarpus reesii 1704]
          Length = 399

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 125/383 (32%), Positives = 215/383 (56%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   GF   S IQ  A   +  G D I Q++SGTGK+  F ++ L ++
Sbjct: 28  DDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISIL-QV 86

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
           I   +++ Q ++L+PTRE+A QI +V+ +VG ++ N+     IGGT V    R +     
Sbjct: 87  IDTALRETQALVLSPTRELATQIQNVIMAVGDYM-NVQCHACIGGTNVGDDIRKLDHGQH 145

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ ++L    +++ ++DEAD L+  GF + I  +Y  LPP  Q++V+S
Sbjct: 146 VVSGTPGRVADMIRRRHLRTRHIKMLVLDEADDLLARGFRDQIYDVYRYLPPATQVVVLS 205

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L+   K+M DP+ I  +     L G+KQ    + +          EE K   L
Sbjct: 206 ATLPYDVLSMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTL 255

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  
Sbjct: 256 CDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNS 315

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +  
Sbjct: 316 RVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV-- 373

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ +I L ++  +  +P N+
Sbjct: 374 --RILRDIELYYSTQIDEMPMNV 394


>gi|422307071|ref|ZP_16394241.1| DEAD/DEAH box helicase family protein, partial [Vibrio cholerae
           CP1035(8)]
 gi|408624390|gb|EKK97337.1| DEAD/DEAH box helicase family protein, partial [Vibrio cholerae
           CP1035(8)]
          Length = 490

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRDPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|307208568|gb|EFN85902.1| Eukaryotic initiation factor 4A-III [Harpegnathos saltator]
          Length = 403

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 207/385 (53%), Gaps = 29/385 (7%)

Query: 6   QKCARTKDVLSNIDVLFENDVLI---------EKPIRQGLQENGFVKESPIQMAAFPYVL 56
           ++ A+T+D LSN++     DV +            + +G+   GF K S IQ  +   ++
Sbjct: 7   RRVAQTED-LSNVEFETSEDVEVIPTFDSMGLRDELLRGIYAYGFEKPSAIQQRSIKPIM 65

Query: 57  NGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAH 116
            G D I Q++SGTGK+  F +A L  L    V++ Q ++L+PTRE+A QI  V+ ++G  
Sbjct: 66  KGRDVIAQAQSGTGKTATFSIAILQSL-DTQVRETQVLVLSPTRELATQIQKVILALGDF 124

Query: 117 VKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK 172
           + N+     IGGT +    R +     +V G+PGR+  MIK + L   ++++ ++DE+D+
Sbjct: 125 M-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDESDE 183

Query: 173 LINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGV 232
           ++N GF E I  +Y  LPP  Q+++VSAT  H+ L    K+M DP+ I  +     L G+
Sbjct: 184 MLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLEGI 243

Query: 233 KQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           KQ    +            EE K   L  L       Q VIF N + + + + E +  AN
Sbjct: 244 KQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN 293

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    + G   QK R   +  F+ G  R+L+TTD+ ARGID   V LVIN ++P++   Y
Sbjct: 294 FTVCSMHGDMPQKERDNIMKEFRSGASRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 353

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  V  + +
Sbjct: 354 IHRIGRSGRFGRKGVSINFVKTDDI 378


>gi|254226977|ref|ZP_04920540.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae V51]
 gi|125620490|gb|EAZ48861.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae V51]
          Length = 576

 Score =  215 bits (548), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 29  SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 88

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 89  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 208 AT-----MPPMVKEIVERFLRDPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 259

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 320 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 380 IERVTRSSMEEIQLPH 395


>gi|68069123|ref|XP_676472.1| RNA helicase-1 [Plasmodium berghei strain ANKA]
 gi|56496186|emb|CAH99280.1| RNA helicase-1, putative [Plasmodium berghei]
          Length = 393

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 131/368 (35%), Positives = 210/368 (57%), Gaps = 27/368 (7%)

Query: 11  TKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           T++++   D L  N+ L+     +G+   GF K S IQ      +L GYD I Q++SGTG
Sbjct: 18  TEEIVDTFDALGLNEKLL-----RGIYSYGFEKPSAIQQRGIKPILKGYDTIGQAQSGTG 72

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT- 129
           K+  FV+++L +LI       Q +ILAPTRE+A QI  VV ++G ++K +     +GGT 
Sbjct: 73  KTATFVISSL-QLINYDYVACQALILAPTRELAQQIQKVVLALGDYLK-VKCHACVGGTV 130

Query: 130 ---QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
               +++ K+ V +VVG+PGR+  MI  ++L +D ++LFI+DEAD++++ GF   I  ++
Sbjct: 131 VREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVF 190

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKN 244
            +L P  Q+ + SAT   + L    ++M DP  +L++ ++ T  L G++  VA+  E   
Sbjct: 191 KKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELT--LEGIQFYVAVEKE--- 245

Query: 245 PSLRYVDEEK--KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
                  E K   L  L       Q +I+ N + + +++ + + N  F    + G  DQK
Sbjct: 246 -------EWKLDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQK 298

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R   +  F+ G  R+LVTTDL ARGID   V LVIN ++P    TY+HR+GR+GR+G +
Sbjct: 299 DRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLVINYDLPCSPDTYIHRIGRSGRFGRK 358

Query: 363 GLVITIVS 370
           G+ I  V+
Sbjct: 359 GVAINFVT 366


>gi|118783118|ref|XP_312776.3| AGAP003089-PA [Anopheles gambiae str. PEST]
 gi|116129059|gb|EAA08469.4| AGAP003089-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 122/358 (34%), Positives = 198/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N + + + + +G+   GF K S IQ  +   ++ G D I Q++SGTGK+  F ++ L  +
Sbjct: 30  NSMGLREELLRGIYAYGFEKPSAIQQRSIQPIVKGRDVIAQAQSGTGKTATFSISILQSM 89

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
               +++ Q + L+PTRE+AVQI  V+ ++G  + N+     IGGT +    R +     
Sbjct: 90  -DTTLRETQVLCLSPTRELAVQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 147

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MIK + L   S+++ ++DEAD+++N GF E I  +Y  LPP  Q++++S
Sbjct: 148 VVSGTPGRVFDMIKRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLIS 207

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L
Sbjct: 208 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTL 257

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R   +  F+ G+ 
Sbjct: 258 CDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRSGQS 317

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 318 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 375


>gi|393246057|gb|EJD53566.1| ATP-dependent RNA helicase FAL1 [Auricularia delicata TFB-10046
           SS5]
          Length = 396

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 123/358 (34%), Positives = 199/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLNLKEDLLRGIYAYNFEKPSAIQQRAILPIIQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
           I   ++  Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R +     
Sbjct: 85  IDTSLRDTQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLDYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   +++L ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRNLRTRNIKLLVLDEADELLNKGFKDQIYDVYRYLPPATQVVILS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMSDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  
Sbjct: 254 TDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMPQKERDAIMQEFRSGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTVEDV 371


>gi|157105113|ref|XP_001648723.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
 gi|108869079|gb|EAT33304.1| AAEL014414-PA [Aedes aegypti]
          Length = 400

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 123/358 (34%), Positives = 197/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N + + + + +G+   GF K S IQ  +   ++ G D I Q++SGTGK+  F +A L  +
Sbjct: 30  NSMGLREELLRGVYAYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSIAILQSM 89

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
               +++ Q + L+PTRE+AVQI  V+ ++G  + N+     IGGT +    R +     
Sbjct: 90  -DTTLRETQVLCLSPTRELAVQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQH 147

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MIK + L   S+++ ++DEAD+++N GF E I  +Y  LPP  Q+ ++S
Sbjct: 148 VVSGTPGRVFDMIKRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLIS 207

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L
Sbjct: 208 ATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTL 257

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R   +  F+ G+ 
Sbjct: 258 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRSGQS 317

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 318 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 375


>gi|154308886|ref|XP_001553778.1| eukaryotic initiation factor 4A-12 [Botryotinia fuckeliana B05.10]
 gi|160385734|sp|A6S4N4.1|FAL1_BOTFB RecName: Full=ATP-dependent RNA helicase fal1
 gi|347838607|emb|CCD53179.1| similar to eukaryotic translation initiation factor eIF-4A subunit
           [Botryotinia fuckeliana]
          Length = 399

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 127/382 (33%), Positives = 213/382 (55%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     I
Sbjct: 88  DTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHI 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|311109370|ref|YP_003982223.1| DEAD/DEAH box helicase family protein [Achromobacter xylosoxidans
           A8]
 gi|310764059|gb|ADP19508.1| DEAD/DEAH box helicase family protein [Achromobacter xylosoxidans
           A8]
          Length = 590

 Score =  215 bits (547), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 213/403 (52%), Gaps = 31/403 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FEN + +   +   +QE GF   +P+Q +A P  L G+D +V S++G+GK+  F++ AL+
Sbjct: 3   FEN-LGLAPALLSAVQEAGFSTPTPVQASAIPQALAGHDLMVSSQTGSGKTAAFMLPALH 61

Query: 82  KLIKLPVQQ---PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERP 134
           ++ ++P  +    Q ++L PTRE+A+Q+TD   + G  + +L     +GG     Q++  
Sbjct: 62  RIAQMPANKGVGVQVLVLTPTRELALQVTDATATYGRKLADLRTATVVGGMPYGAQLKAL 121

Query: 135 KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
            R V ++V +PGR+   +    + +++V   ++DEAD++++ GF+EDI  I  +LP  +Q
Sbjct: 122 SRRVDVLVATPGRLIDHLNSGRVKLNTVHTLVLDEADRMLDMGFIEDIETIVGRLPEDRQ 181

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
            L+ SAT          + M DP  I        + G K+    I +    SL Y D+  
Sbjct: 182 TLLFSATLDGTIAKLAARMMRDPQRIE-------MAGAKEKHTNITQ----SLLYADDAS 230

Query: 255 KLVQLLSQT----PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
             +QLL         +Q ++F++ +   + + + LA+  F A  L G  +Q+ R  +L  
Sbjct: 231 HKMQLLDHVLRDAALDQAIVFTSTKRGADDLADRLADQGFAAAALHGDMNQRQRTRTLSQ 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +RG++RILV TD+AARGID   +   +N ++P  A  Y+HR+GR GR G  GL  T+ +
Sbjct: 291 LQRGQLRILVATDVAARGIDVQGISHAVNFDLPMQAEDYVHRIGRTGRAGRSGLAFTLAT 350

Query: 371 AESLVKFHSLMGEI-NLDHAFNVGLVPDNLTGDQINWTQRVQT 412
                  HS   ++  ++H     + P+ + G +   T R  T
Sbjct: 351 -------HSERHKVRRIEHYIGQSITPEVIAGLEPKRTPRPST 386


>gi|170578338|ref|XP_001894368.1| ATP-dependent helicase DDX48 [Brugia malayi]
 gi|158599081|gb|EDP36794.1| ATP-dependent helicase DDX48, putative [Brugia malayi]
          Length = 399

 Score =  215 bits (547), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/351 (35%), Positives = 198/351 (56%), Gaps = 21/351 (5%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F +A L  L  + +++ 
Sbjct: 42  LLRGIYSYGFEKPSAIQQRAIKQIVKGRDVIAQAQSGTGKTATFSIAVLQSL-DISLRET 100

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGR 147
           Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT V    R +     +V G+PGR
Sbjct: 101 QALILSPTRELAVQIQKVVLALGDYL-NVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGR 159

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +  MI+ + L   S+++ ++DEAD+++N GF E +  IY  LPP  Q++++SAT  H+ L
Sbjct: 160 VFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEIL 219

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQT 263
               K+M DP+ I  +     L G+KQ               VD E+     L  L    
Sbjct: 220 EMTSKFMTDPIRILVKRDELTLEGIKQFFV-----------AVDREEWKFDTLCDLYDTL 268

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF N + + + + E L  ANF    + G  +QK R A +  F+ G  R+L++TD
Sbjct: 269 TITQAVIFCNTRRKVDWLAEKLKEANFTVSSMHGEMEQKERDAIMKEFRGGASRLLISTD 328

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           + ARG+D   V LV+N ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 329 VFARGLDIPQVSLVVNYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 379


>gi|403361644|gb|EJY80525.1| hypothetical protein OXYTRI_22086 [Oxytricha trifallax]
          Length = 411

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 23/385 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + + + +G+   GF K S +Q  A   ++ G D IVQS+SGTGK+ VF   AL   
Sbjct: 41  DDMGLREELLRGIYAYGFNKPSAVQQRAILPIMKGRDVIVQSQSGTGKTCVFTSGALQS- 99

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE----RPKRPVQ 139
           I L +++PQ +IL+PTRE+A Q   V  ++G +++ + V   IGG  V     + +    
Sbjct: 100 IDLQLREPQVLILSPTRELAEQTQKVALALGDYMQ-VKVHCCIGGRNVNEDVFKFEHGCH 158

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ +     S+++ I+DEAD+++N GF + +  IY  LP   Q +V+S
Sbjct: 159 VVSGTPGRVFDMIQRRTFKTTSIKMLILDEADEMLNQGFKDQVYDIYRYLPYGTQCVVIS 218

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT   + L    K+M DP+ I  +     L G+KQ    + +          EE K   L
Sbjct: 219 ATLPQEILEMTNKFMNDPIKILVKRDEITLEGIKQFFVAVDK----------EEYKFETL 268

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + E + + +  ANF   Y+ G   QK R A +  F+ G+ 
Sbjct: 269 CDLYDTLTITQAVIFCNKKSKVEWLAKEMRKANFTVSYMHGQMPQKERDAIMAEFRAGQS 328

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+TTD+  RG+D   V LVIN ++P +   Y+HR+GR+GRY  +G+ I  V+ E +  
Sbjct: 329 RVLITTDVWGRGLDVQQVSLVINYDLPLNRELYIHRIGRSGRYERKGVAINFVTNEDV-- 386

Query: 377 FHSLMGEINLDHAFNVGLVPDNLTG 401
              ++ +I   ++  +  +P N+TG
Sbjct: 387 --RILRDIEQYYSTQIEEMPMNITG 409


>gi|67613960|ref|XP_667337.1| eukaryotic initiation factor 4A (eIF4A) (eIF-4A) [Cryptosporidium
           hominis TU502]
 gi|126643927|ref|XP_001388148.1| eukaryotic initiation factor 4A (eIF4A) (eIF-4A) [Cryptosporidium
           parvum Iowa II]
 gi|10720033|sp|O02494.1|IF4A_CRYPV RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=ATP-dependent RNA helicase eIF4A
 gi|2150025|gb|AAB58726.1| translation initiation factor [Cryptosporidium parvum]
 gi|2155304|gb|AAB58799.1| translation initiation factor [Cryptosporidium parvum]
 gi|54658467|gb|EAL37111.1| eukaryotic initiation factor 4A (eIF4A) (eIF-4A) [Cryptosporidium
           hominis]
 gi|126117225|gb|EAZ51325.1| eukaryotic initiation factor 4A (eIF4A) (eIF-4A) [Cryptosporidium
           parvum Iowa II]
 gi|323508859|dbj|BAJ77322.1| cgd1_880 [Cryptosporidium parvum]
 gi|323510549|dbj|BAJ78168.1| cgd1_880 [Cryptosporidium parvum]
          Length = 405

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 135/379 (35%), Positives = 214/379 (56%), Gaps = 23/379 (6%)

Query: 7   KCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQ 64
           + A T ++ SN D + E    + +E  + +G+   GF K S IQ      +L+GYD I Q
Sbjct: 15  QVASTGEIESNYDEIVECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQ 74

Query: 65  SKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDY 124
           ++SGTGK+  FV+AAL K I   +   Q ++LAPTRE+A QI  V  ++G + + L    
Sbjct: 75  AQSGTGKTATFVIAALQK-IDYSLNACQVLLLAPTRELAQQIQKVALALGDYCE-LRCHA 132

Query: 125 FIGGTQVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVE 180
            +GGT V     + K  V +VVG+PGR+  M+   YL +D+++LFI+DEAD++++ GF  
Sbjct: 133 CVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKV 192

Query: 181 DITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVAL 238
            I  I+ +LP   Q+ + SAT  ++ L    ++M DP  +L++ E+ T  L G++Q    
Sbjct: 193 QIHDIFKKLPQDVQVALFSATMPNEILHLTTQFMRDPKRILVKQEELT--LEGIRQFYVG 250

Query: 239 IPECKNPSLRYVDEEK--KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
           + +         DE K   L+ L       Q +I+ N + R + + + +   +F    + 
Sbjct: 251 VEK---------DEWKMDTLIDLYETLTIVQAIIYCNTRRRVDQLTKQMRERDFTCSSMH 301

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  DQK R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P    TY+HR+GR+
Sbjct: 302 GDMDQKDREVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPVSPETYIHRIGRS 361

Query: 357 GRYGTRGLVITIVSAESLV 375
           GR+G +G+ I  V+ + +V
Sbjct: 362 GRFGKKGVSINFVTDDDIV 380


>gi|357630906|gb|EHJ78725.1| eukaryotic initiation factor 4A-III [Danaus plexippus]
          Length = 369

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 120/348 (34%), Positives = 193/348 (55%), Gaps = 19/348 (5%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF K S IQ  +   ++ G D I Q++SGTGK+  F ++ L  L    +++ Q 
Sbjct: 9   RGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGKTATFSISILQSL-DTTLRETQV 67

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIK 149
           +IL+PTRE+A QI  V+ ++G  + N+     IGGT +    R +     +V G+PGR+ 
Sbjct: 68  LILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVF 126

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MI+ + L   S+++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  H+ L  
Sbjct: 127 DMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEM 186

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFN 266
             K+M DP+ I  +     L G+KQ    +            EE K   L  L       
Sbjct: 187 TSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTIT 236

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q VIF N + + + + + +  ANF    + G   QK R   +  F+ G+ R+L+TTD+ A
Sbjct: 237 QAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKERDNIMKEFRSGQSRVLITTDVWA 296

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           RGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 297 RGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 344


>gi|134057099|emb|CAK44387.1| unnamed protein product [Aspergillus niger]
          Length = 491

 Score =  215 bits (547), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 123/381 (32%), Positives = 213/381 (55%), Gaps = 23/381 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 88  DTVVRESQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDN 398
             ++ +I L ++  +  +P N
Sbjct: 374 -RILRDIELYYSTQIDEMPMN 393


>gi|121719103|ref|XP_001276289.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Aspergillus clavatus NRRL 1]
 gi|142985525|sp|A1C595.1|FAL1_ASPCL RecName: Full=ATP-dependent RNA helicase fal1
 gi|119404487|gb|EAW14863.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Aspergillus clavatus NRRL 1]
          Length = 399

 Score =  214 bits (546), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 214/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 88  DTAVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|345569803|gb|EGX52629.1| hypothetical protein AOL_s00007g412 [Arthrobotrys oligospora ATCC
           24927]
          Length = 400

 Score =  214 bits (546), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 134/401 (33%), Positives = 222/401 (55%), Gaps = 26/401 (6%)

Query: 6   QKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQS 65
           Q+ A +K+V   +   FE   L E  +R G+   G+   S +Q  A   +  G D I Q+
Sbjct: 14  QEFATSKEV--TVAPTFEAMHLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQA 70

Query: 66  KSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF 125
           +SGTGK+  F ++ L ++I   +++ Q ++L+PTRE+A QI +VV ++G ++ N+     
Sbjct: 71  QSGTGKTATFSISIL-QVIDTSLRETQALVLSPTRELATQIQNVVMALGDYM-NVQCHAC 128

Query: 126 IGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVED 181
           IGGT V    R +     +V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E 
Sbjct: 129 IGGTNVGEDIRKLDHGQHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNKGFREQ 188

Query: 182 ITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPE 241
           I  +Y  LPP  Q++VVSAT  +D L    K+M DP+ I  +     L G+KQ    + +
Sbjct: 189 IYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK 248

Query: 242 CKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
                     E+ K   L  L       Q VIF N + + + + + + +ANF    + G 
Sbjct: 249 ----------EDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGE 298

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
             QK R A +  F++G  R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR
Sbjct: 299 MAQKERDAIMSEFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR 358

Query: 359 YGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           +G +G+ I  V++E +     ++ +I L ++  +  +P N+
Sbjct: 359 FGRKGVAINFVTSEDV----RILRDIELYYSTQIDEMPMNV 395


>gi|119499061|ref|XP_001266288.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Neosartorya fischeri NRRL 181]
 gi|142985577|sp|A1D071.1|FAL1_NEOFI RecName: Full=ATP-dependent RNA helicase fal1
 gi|119414452|gb|EAW24391.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Neosartorya fischeri NRRL 181]
          Length = 399

 Score =  214 bits (546), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 214/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 88  DTVVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|19113775|ref|NP_592863.1| ATP-dependent RNA helicase (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|1352438|sp|Q10055.1|FAL1_SCHPO RecName: Full=ATP-dependent RNA helicase fal1
 gi|1103737|emb|CAA92238.1| ATP-dependent RNA helicase (predicted) [Schizosaccharomyces pombe]
          Length = 394

 Score =  214 bits (546), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 133/360 (36%), Positives = 196/360 (54%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F +  L 
Sbjct: 23  FEEMNLKEDLLR-GIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGILQ 81

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
             I L V+  Q +IL+PTRE+AVQI +VV ++G H+ N+     IGGT V    + +   
Sbjct: 82  S-IDLSVRDTQALILSPTRELAVQIQNVVLALGDHM-NVQCHACIGGTSVGNDIKKLDYG 139

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L   +V++ I+DEAD+L+N GF E I  IY  LPP  Q++V
Sbjct: 140 QHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVV 199

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT   D L    K+  +P+ I  +     L G+KQ    + +          EE K  
Sbjct: 200 VSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 249

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + E +  ANF    + G   QK R A +  F++G
Sbjct: 250 TLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQG 309

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L+ TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 310 NSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDV 369


>gi|398392974|ref|XP_003849946.1| ATP-dependent RNA helicase [Zymoseptoria tritici IPO323]
 gi|339469824|gb|EGP84922.1| hypothetical protein MYCGRDRAFT_74526 [Zymoseptoria tritici IPO323]
          Length = 400

 Score =  214 bits (546), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 131/385 (34%), Positives = 214/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 28  FEAMHLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISTL- 85

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT V    R +   
Sbjct: 86  QVIDTAVRETQALVLSPTRELATQIQSVLLALGDYM-NVQCHACIGGTNVGEDIRKLDYG 144

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L   ++++ I+DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 145 QHVVSGTPGRVADMIRRRNLRTRNIKMLILDEADELLNRGFREQIYDVYRYLPPATQVVV 204

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 205 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 254

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + + +ANF    + G   QK R + +  F++G
Sbjct: 255 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGEMPQKERDSIMGDFRQG 314

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 315 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 374

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 375 ----RILRDIELYYSTQIDEMPMNV 395


>gi|386815861|ref|ZP_10103079.1| ATP-dependent RNA helicase CsdA [Thiothrix nivea DSM 5205]
 gi|386420437|gb|EIJ34272.1| ATP-dependent RNA helicase CsdA [Thiothrix nivea DSM 5205]
          Length = 638

 Score =  214 bits (546), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 122/344 (35%), Positives = 191/344 (55%), Gaps = 13/344 (3%)

Query: 31  PIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ 90
           P+ Q +QE G+   S IQ    PY+L G D + Q+++GTGK+  F +  L++L  L    
Sbjct: 19  PVLQAVQELGYETPSAIQAETIPYLLEGRDVLGQAQTGTGKTAAFALPLLSRL-DLSTTG 77

Query: 91  PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVGSPG 146
           PQ +ILAPTRE+A+Q+ +  +   AH+   HV    GG    TQ  + +R V +VVG+PG
Sbjct: 78  PQILILAPTRELAIQVAEACQKYAAHLPGFHVMPIYGGQDYRTQFRQLERGVHVVVGTPG 137

Query: 147 RIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
           R+   ++ + L +D+++  ++DEAD+++  GF+EDI WI  Q P  +Q+ + SAT     
Sbjct: 138 RVMDHLRRETLKLDNLQALVLDEADEMLRMGFIEDIEWIMEQTPVTRQIALFSATMPPAI 197

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFN 266
               Q Y+ +P  ++ +  T     ++Q   L+       L  +D    L ++L   PF+
Sbjct: 198 HRIAQSYLNNPAEVKIQVKTTTADTIRQRYWLVS-----GLHKLD---ALTRILEAEPFD 249

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
            C+IF   +     + E L    +GA  L+G   Q  R  ++D  K+GK+ IL+ TD+AA
Sbjct: 250 ACIIFVRTKTETVELAEKLQARGYGAVALNGDIPQNVRERTVDQLKKGKIDILIATDVAA 309

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           RG+D   +  VIN +IP D  +Y+HR+GR GR G  G  I  VS
Sbjct: 310 RGLDVERITHVINYDIPTDTESYVHRIGRTGRAGRSGDAILFVS 353


>gi|148675601|gb|EDL07548.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 20, isoform CRA_a [Mus
           musculus]
          Length = 511

 Score =  214 bits (546), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/278 (46%), Positives = 168/278 (60%), Gaps = 11/278 (3%)

Query: 2   AHDIQKC-ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           AHDI     RT DV+      FE+ +L+ +P+ +GL+  GF + SP+Q+ A P    G D
Sbjct: 50  AHDIGGPRTRTGDVVLAEPADFES-LLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLD 108

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            IVQ+KSGTGK+ VF   AL+ LI L     Q +ILAPTREIAVQI  V+ ++G  ++ L
Sbjct: 109 LIVQAKSGTGKTCVFSTIALDSLI-LENYSTQILILAPTREIAVQIHSVITAIGIKMEGL 167

Query: 121 HVDYFIGGTQVERPK---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               FIGGT + + K   +   I VGSPGRIKQ+I+L YLN  S+RLFI+DEADKL+  G
Sbjct: 168 ECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEG 227

Query: 178 -FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
            F E I WIYS LP  KQML VSATY       L +YM DP  +R   +   L+G+KQ  
Sbjct: 228 SFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYY 287

Query: 237 ALIPECKNPSLRYVDEEKK--LVQLLSQTPFNQCVIFS 272
            ++     P    + EEK   L +L S+ PFNQ ++ S
Sbjct: 288 QVV--NSYPLAHKIFEEKTQHLQELFSKVPFNQALVVS 323


>gi|393216078|gb|EJD01569.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
          Length = 396

 Score =  214 bits (546), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 119/355 (33%), Positives = 200/355 (56%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLGLKEDLLRGIYAYNFEKPSAIQQRAILPIVQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + +++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTLRETQALVLSPTRELATQIQSVLLALGDYM-NVQCHACIGGTSIGEDIRKLEHGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRTLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVILS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT  +D L    K+M DP+ I  +     L G+KQ    +        R   +   L  L
Sbjct: 204 ATLPYDVLDMTTKFMTDPVRILVKRDELTLEGIKQFFVAVE-------REDWKFDTLCDL 256

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  R+L
Sbjct: 257 YDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMPQKERDAIMAEFRAGTSRVL 316

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 317 ITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|91206663|sp|Q2UAK1.1|FAL1_ASPOR RecName: Full=ATP-dependent RNA helicase fal1
 gi|83771282|dbj|BAE61414.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 398

 Score =  214 bits (546), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 214/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 28  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 86

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 87  DTVVRESQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 145

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 146 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 205

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 206 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 255

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 256 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 315

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 316 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 372

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 373 -RILRDIELYYSTQIDEMPMNV 393


>gi|238502855|ref|XP_002382661.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Aspergillus flavus NRRL3357]
 gi|317027125|ref|XP_001400167.2| ATP-dependent RNA helicase FAL1 [Aspergillus niger CBS 513.88]
 gi|317148165|ref|XP_001822547.2| ATP-dependent RNA helicase FAL1 [Aspergillus oryzae RIB40]
 gi|152032452|sp|A5AAE5.2|FAL1_ASPNC RecName: Full=ATP-dependent RNA helicase fal1
 gi|220691471|gb|EED47819.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Aspergillus flavus NRRL3357]
 gi|350634949|gb|EHA23311.1| hypothetical protein ASPNIDRAFT_37320 [Aspergillus niger ATCC 1015]
 gi|358367906|dbj|GAA84524.1| eukaryotic translation initiation factor eIF-4A subunit
           [Aspergillus kawachii IFO 4308]
 gi|391867920|gb|EIT77158.1| putative ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
          Length = 399

 Score =  214 bits (546), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 214/382 (56%), Gaps = 23/382 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 29  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 87

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 88  DTVVRESQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 146

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 147 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 206

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 207 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 256

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 257 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 316

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 317 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 373

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ +I L ++  +  +P N+
Sbjct: 374 -RILRDIELYYSTQIDEMPMNV 394


>gi|281345231|gb|EFB20815.1| hypothetical protein PANDA_010757 [Ailuropoda melanoleuca]
          Length = 404

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 123/353 (34%), Positives = 196/353 (55%), Gaps = 25/353 (7%)

Query: 35  GLQEN------GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           GL+E+       F K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + V
Sbjct: 44  GLREDLLRGIYAFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQV 102

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGS 144
           ++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G+
Sbjct: 103 RETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGT 161

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  H
Sbjct: 162 PGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPH 221

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLS 261
           + L    K+M DP+ I  +     L G+KQ    +            EE K   L  L  
Sbjct: 222 EILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYD 271

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
                Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L++
Sbjct: 272 TLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLIS 331

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 332 TDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 384


>gi|407926090|gb|EKG19061.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
           phaseolina MS6]
          Length = 399

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 131/385 (34%), Positives = 212/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 27  FEAMHLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL- 84

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 85  QVIDTAVRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 143

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 144 QHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 203

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 204 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 253

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 254 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQG 313

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 314 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 373

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 374 ----RILRDIELYYSTQIDEMPMNV 394


>gi|170091668|ref|XP_001877056.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164648549|gb|EDR12792.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 396

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 121/358 (33%), Positives = 201/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+    F K S IQ  A   +  G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DDLGLKEDLLRGIYAYNFEKPSAIQQRAILPITQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVTVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRSLRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVILLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  +NF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRASNFTVSSMHGEMVQKERDAIMAEFRGGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|421483787|ref|ZP_15931360.1| DEAD/DEAH box helicase family protein [Achromobacter piechaudii
           HLE]
 gi|400198070|gb|EJO31033.1| DEAD/DEAH box helicase family protein [Achromobacter piechaudii
           HLE]
          Length = 603

 Score =  214 bits (545), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 213/400 (53%), Gaps = 31/400 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FEN + +   +   +QE GF   + +Q AA P  L G+D +V S++G+GK+  F++ AL+
Sbjct: 3   FEN-LGLAPALLSAVQEAGFSTPTSVQAAAIPQALAGHDLMVSSQTGSGKTAAFMLPALH 61

Query: 82  KLIKLPVQQ---PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERP 134
           ++ ++P  +    Q ++L PTRE+A+Q+T+   + G  + +L     +GG     Q++  
Sbjct: 62  RIAQMPANKGVGVQVLVLTPTRELALQVTEATETYGRKLADLRTATVVGGMPYGAQLKAL 121

Query: 135 KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
            R V ++V +PGR+   ++   + +++V   ++DEAD++++ GF+EDI  I S+LP  +Q
Sbjct: 122 SRRVDVLVATPGRLIDHLQSGRVKLNTVHTLVLDEADRMLDMGFIEDIETIVSRLPEDRQ 181

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
            L+ SAT          K M DP  I        + G K+    I +    SL Y D+  
Sbjct: 182 TLLFSATLDGTIAKLAAKMMRDPQRIE-------MAGAKEKHTNITQ----SLLYADDAS 230

Query: 255 KLVQLLSQT----PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
             +QLL         +Q ++F++ +   + + + LA+  F A  L G  +Q+ R  +L  
Sbjct: 231 HKMQLLDHVLRDAKLDQAIVFTSTKRGADDLADRLADQGFAAAALHGDMNQRQRTRTLSQ 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +RG++RILV TD+AARGID   +   +N ++P  A  Y+HR+GR GR G  GL  T+ +
Sbjct: 291 LQRGQLRILVATDVAARGIDVQGISHAVNFDLPMQAEDYVHRIGRTGRAGRSGLAFTLAT 350

Query: 371 AESLVKFHSLMGEI-NLDHAFNVGLVPDNLTGDQINWTQR 409
                  HS   ++  ++H     + P+ + G +   T R
Sbjct: 351 -------HSERHKVRRIEHYIGQSITPEVIAGLEPKRTPR 383


>gi|443716043|gb|ELU07720.1| hypothetical protein CAPTEDRAFT_155818 [Capitella teleta]
          Length = 406

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 196/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F ++ L  L    
Sbjct: 40  LREDLLRGIYAYGFEKPSAIQQRAVRPIVKGRDVIAQAQSGTGKTATFSISILQGL-DTQ 98

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +IL+PTRE+A QI  V+ ++G ++ ++     IGGT+V    R +     +V G
Sbjct: 99  VRETQALILSPTRELATQIQKVILALGDYM-SVQCHSCIGGTKVGEDIRKLDYGQHVVSG 157

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ I+DEAD+++N GF E I  +Y  LPP  Q+L++SAT  
Sbjct: 158 TPGRVFDMIRRRSLRTRAIKMLILDEADEMLNKGFKEQIYDVYRYLPPATQVLLISATLP 217

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 218 HEILEITSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 267

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   Q  R A +  F+ G  R+L+
Sbjct: 268 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQPEREAIMKEFRSGSSRVLI 327

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 328 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDI 381


>gi|242024557|ref|XP_002432694.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
           corporis]
 gi|212518164|gb|EEB19956.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
           corporis]
          Length = 407

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 195/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  +   ++ G D I Q++SGTGK+  F ++ +  L    
Sbjct: 41  LREELLRGIYAYGFEKPSAIQQRSIKPIVKGRDVIAQAQSGTGKTATFSISIIQSL-DTT 99

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q + L+PTRE+AVQI  V+ ++G  + N+     IGGT +    R +     ++ G
Sbjct: 100 VRETQVLCLSPTRELAVQIQKVILALGDFM-NVQCHACIGGTNLGEDIRKLDYGQHVISG 158

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 159 TPGRVFDMIRRRVLRTRFIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 218

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 219 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 268

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  R+L+
Sbjct: 269 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSCMHGDMPQKERDAIMKEFRTGLSRVLI 328

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 329 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 382


>gi|401413568|ref|XP_003886231.1| DEAD-box ATP-dependent RNA helicase 34, related [Neospora caninum
           Liverpool]
 gi|325120651|emb|CBZ56206.1| DEAD-box ATP-dependent RNA helicase 34, related [Neospora caninum
           Liverpool]
          Length = 411

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 130/383 (33%), Positives = 209/383 (54%), Gaps = 30/383 (7%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+ + D L  N+ L+     +G+   GF K S IQ      +L+ +D I Q++SGTGK+
Sbjct: 35  EVVDSFDALKLNESLL-----RGIYSYGFEKPSAIQQRGIKPILDRHDTIGQAQSGTGKT 89

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE 132
             F +AAL +LI   +   Q +ILAPTRE+A QI  VV ++G +++ +     +GGT V 
Sbjct: 90  ATFAIAAL-QLIDYNINNCQVLILAPTRELAQQIQKVVLALGDYLQ-VRCHACVGGTVVR 147

Query: 133 ----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
               + K  V +VVG+PGR+  M++ ++L +D ++LFIMDEAD++++ GF   I  ++ +
Sbjct: 148 DDIAKLKAGVHMVVGTPGRVHDMMEKRHLRVDDMKLFIMDEADEMLSRGFKSQIYDVFKK 207

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q+ + SAT   D L    K+M DP  I  ++    L G++Q              
Sbjct: 208 LPPDVQVALFSATMPQDILELTTKFMRDPKRILVKNDELTLEGIRQF------------- 254

Query: 249 YVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
           YV  EK+      L  L       Q +I+ N + + + +   ++  +F    + G  DQK
Sbjct: 255 YVAVEKEDWKLETLCDLYETLTITQAIIYCNTRRKVDFLTSKMSERDFTVSSMHGDMDQK 314

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           +R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     Y+HR+GR+GR+G +
Sbjct: 315 SREMIMREFRSGSTRVLITTDLLARGIDVQQVSLVINYDLPATKENYIHRIGRSGRFGRK 374

Query: 363 GLVITIVSAESLVKFHSLMGEIN 385
           G+ I  V++  + +   +    N
Sbjct: 375 GVAINFVTSSDVEQLKEIEKHYN 397


>gi|260790063|ref|XP_002590063.1| hypothetical protein BRAFLDRAFT_123431 [Branchiostoma floridae]
 gi|229275251|gb|EEN46074.1| hypothetical protein BRAFLDRAFT_123431 [Branchiostoma floridae]
          Length = 403

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I Q++SG GK+  F ++ L + + + 
Sbjct: 37  LREDLLRGIYAYGFEKPSAIQQRAIKPIVKGRDVIAQAQSGVGKTATFSISIL-QCLDIQ 95

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+A QI  V+ ++G ++ ++     IGGT V    R +     +V G
Sbjct: 96  MREVQALVLSPTRELATQIQKVILALGDYM-SVQCHSCIGGTNVGEDIRKLDYGQHVVSG 154

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   S+++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 155 TPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLP 214

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 215 HEILEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 264

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  R+L+
Sbjct: 265 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDAIMKEFRSGASRVLI 324

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V L+IN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 325 TTDVWARGIDVPQVSLIINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 378


>gi|126306068|ref|XP_001381369.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Monodelphis
           domestica]
          Length = 404

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 122/358 (34%), Positives = 202/358 (56%), Gaps = 23/358 (6%)

Query: 26  VLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK 85
           V + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + 
Sbjct: 36  VGLREDLLRGIYAYGFEKPSAIQQRALKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLD 94

Query: 86  LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIV 141
           + V++ Q +ILAPTRE+AVQI  V+ ++G ++ N+     IGGT V     +  R   +V
Sbjct: 95  IQVRETQALILAPTRELAVQIQKVLLALGDYM-NVQCHACIGGTNVGDDIRQLDRGQHVV 153

Query: 142 VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSAT 201
            G+PGR+  MI+ + L   ++++ ++DEAD++++ GF E I  +Y  LPP  Q++++SAT
Sbjct: 154 AGTPGRVFDMIRRRSLTTRAIKMLVLDEADQMLDKGFKEQIYDVYRYLPPSIQVVLISAT 213

Query: 202 YSHDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
             H+ L    K+M DP+  L+R ++ T  L G+KQ    +            EE K   +
Sbjct: 214 LPHEILEMTTKFMTDPIRILVRRDELT--LEGIKQFFVAVER----------EEWKFDTV 261

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G    + R   +  F+ G  
Sbjct: 262 CDLYDSLTITQAVIFCNTKRKVDWLTEKMREANFTVSSIHGDMPSRERKFIMKEFRSGVN 321

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 322 RVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 379


>gi|410254696|gb|JAA15315.1| eukaryotic translation initiation factor 4A3 [Pan troglodytes]
 gi|410340855|gb|JAA39374.1| eukaryotic translation initiation factor 4A3 [Pan troglodytes]
          Length = 411

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 LRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++    +HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELSIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|318054604|ref|NP_001187599.1| eukaryotic initiation factor 4a-iii [Ictalurus punctatus]
 gi|308323464|gb|ADO28868.1| eukaryotic initiation factor 4a-iii [Ictalurus punctatus]
          Length = 389

 Score =  214 bits (545), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 124/365 (33%), Positives = 200/365 (54%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D   QS+SGTGK+  F 
Sbjct: 12  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVSAQSQSGTGKTATFC 71

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           V+ L + + + V++ Q +ILAPTRE+A QI  V+ ++G  + N+     IGGT V    R
Sbjct: 72  VSVL-QCLDIQVRETQALILAPTRELAGQIQKVLLALGDFM-NVQCHACIGGTNVGEDIR 129

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 130 KLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 189

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 190 TQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------E 239

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK R + + 
Sbjct: 240 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMK 299

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  R+L++TD+ A G+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 300 EFRSGASRVLISTDVWAGGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 359

Query: 370 SAESL 374
             + +
Sbjct: 360 KNDDI 364


>gi|110598397|ref|ZP_01386670.1| Helicase-like:DbpA, RNA-binding:DEAD/DEAH box helicase-like
           [Chlorobium ferrooxidans DSM 13031]
 gi|110340006|gb|EAT58508.1| Helicase-like:DbpA, RNA-binding:DEAD/DEAH box helicase-like
           [Chlorobium ferrooxidans DSM 13031]
          Length = 598

 Score =  214 bits (545), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 190/347 (54%), Gaps = 13/347 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +P+ Q L+E G+   +PIQ    P +L G D + Q+++GTGK+  F +  L+  I+L 
Sbjct: 16  LAEPLMQALEEVGYENPTPIQAETIPLLLEGRDVLGQAQTGTGKTAAFALPVLSN-IRLA 74

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVG 143
           + +PQ ++LAPTRE+A+Q+ +  +    H+K  HV    GG     Q+   KR V +VVG
Sbjct: 75  LAEPQALVLAPTRELAIQVAEAFQRYAVHLKGFHVVPIYGGQDYGIQLRMLKRGVHVVVG 134

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   ++   LN+DS++  ++DEAD+++  GF++D+ WI  Q P  +Q+ + SAT  
Sbjct: 135 TPGRVMDHMRRGSLNLDSLQCLVLDEADEMLRMGFIDDVEWILDQTPKDRQVALFSATMP 194

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                  QKY+ +P  +  +  T  +  ++Q   ++       +        L ++L   
Sbjct: 195 SAIRRIAQKYLNNPAQVTIQTKTTTVETIRQRYWIVGGSHKLDI--------LTRILEVE 246

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
           PF+  +IF   +     + E L    +GA  L+G   Q  R  ++D  K G + I++ TD
Sbjct: 247 PFDGILIFVRTKTMTIELAEKLQARGYGAAALNGDMAQNQRERTVDQLKNGALSIVIATD 306

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   +  VIN +IP D  +Y+HR+GR GR G  G  I  VS
Sbjct: 307 VAARGLDVERISHVINYDIPSDTESYVHRIGRTGRAGRTGDAILFVS 353


>gi|159125976|gb|EDP51092.1| inositol 5-phosphatase, putative [Aspergillus fumigatus A1163]
          Length = 429

 Score =  214 bits (544), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 123/381 (32%), Positives = 213/381 (55%), Gaps = 23/381 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I
Sbjct: 38  DMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVI 96

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QI 140
              V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +
Sbjct: 97  DTVVRETQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHV 155

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSA
Sbjct: 156 VSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSA 215

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M DP+ +  +     L G+KQ    + +          EE K   L 
Sbjct: 216 TLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------EEWKFDTLC 265

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R
Sbjct: 266 DLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSR 325

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+++ +   
Sbjct: 326 VLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDV--- 382

Query: 378 HSLMGEINLDHAFNVGLVPDN 398
             ++ +I L ++  +  +P N
Sbjct: 383 -RILRDIELYYSTQIDEMPMN 402


>gi|237836123|ref|XP_002367359.1| eukaryotic translation initiation factor 4A [Toxoplasma gondii
           ME49]
 gi|14595111|emb|CAC43441.1| eukaryotic translation initiation factor 4A [Toxoplasma gondii]
 gi|211965023|gb|EEB00219.1| eukaryotic translation initiation factor 4A [Toxoplasma gondii
           ME49]
 gi|221484990|gb|EEE23280.1| conserved hypothetical protein [Toxoplasma gondii GT1]
 gi|221505957|gb|EEE31592.1| eukaryotic translation initiation factor 4A, putative [Toxoplasma
           gondii VEG]
          Length = 412

 Score =  214 bits (544), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 130/383 (33%), Positives = 209/383 (54%), Gaps = 30/383 (7%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+ + D L  N+ L+     +G+   GF K S IQ      +L+ +D I Q++SGTGK+
Sbjct: 36  EVVDSFDALKLNESLL-----RGIYSYGFEKPSAIQQRGIKPILDRHDTIGQAQSGTGKT 90

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE 132
             F +AAL +LI   +   Q +ILAPTRE+A QI  VV ++G +++ +     +GGT V 
Sbjct: 91  ATFAIAAL-QLIDYNINNCQVLILAPTRELAQQIQKVVLALGDYLQ-VRCHACVGGTVVR 148

Query: 133 ----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
               + K  V +VVG+PGR+  M++ ++L +D ++LFIMDEAD++++ GF   I  ++ +
Sbjct: 149 DDIAKLKAGVHMVVGTPGRVHDMMEKRHLRVDDMKLFIMDEADEMLSRGFKSQIYDVFKK 208

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q+ + SAT   D L    K+M DP  I  ++    L G++Q              
Sbjct: 209 LPPDVQVALFSATMPQDILELTTKFMRDPKRILVKNDELTLEGIRQF------------- 255

Query: 249 YVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
           YV  EK+      L  L       Q +I+ N + + + +   ++  +F    + G  DQK
Sbjct: 256 YVAVEKEDWKLETLCDLYETLTITQAIIYCNTRRKVDFLTSKMSERDFTVSSMHGDMDQK 315

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           +R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     Y+HR+GR+GR+G +
Sbjct: 316 SREMIMREFRSGSTRVLITTDLLARGIDVQQVSLVINYDLPATKENYIHRIGRSGRFGRK 375

Query: 363 GLVITIVSAESLVKFHSLMGEIN 385
           G+ I  V++  + +   +    N
Sbjct: 376 GVAINFVTSSDVEQLKEIEKHYN 398


>gi|71024093|ref|XP_762276.1| hypothetical protein UM06129.1 [Ustilago maydis 521]
 gi|74699014|sp|Q4P184.1|FAL1_USTMA RecName: Full=ATP-dependent RNA helicase FAL1
 gi|46101778|gb|EAK87011.1| hypothetical protein UM06129.1 [Ustilago maydis 521]
          Length = 397

 Score =  214 bits (544), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   I   
Sbjct: 31  LKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQS-IDTT 89

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+A+QI  VV ++G ++ N+     IGGT V    R +     IV G
Sbjct: 90  LRETQALVLSPTRELAIQIQSVVLALGDYL-NVQCHACIGGTSVGEDIRKLDYGQHIVSG 148

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ ++L   ++++ I+DE+D+L+N GF + I  +Y  LPP  Q++++SAT  
Sbjct: 149 TPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFKDQIYDVYRYLPPSTQVVLLSATLP 208

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            D L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 209 QDVLEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 258

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +   NF    + G   QK R   +  F++G  R+L+
Sbjct: 259 DTLTITQAVIFCNTRRKVDWLSAKMKENNFQVSSMHGEMQQKERDEVMAEFRQGSSRVLI 318

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID AN+ LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 319 TTDVWARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTVDDV 372


>gi|260945385|ref|XP_002616990.1| hypothetical protein CLUG_02434 [Clavispora lusitaniae ATCC 42720]
 gi|238848844|gb|EEQ38308.1| hypothetical protein CLUG_02434 [Clavispora lusitaniae ATCC 42720]
          Length = 397

 Score =  214 bits (544), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 205/358 (57%), Gaps = 18/358 (5%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L   I   V
Sbjct: 33  KPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLQA-IDWNV 91

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGS 144
           +Q Q ++L+PTRE+A+QI +V+R++G ++ N+H    IGG QV    ++  +   IV G+
Sbjct: 92  RQCQALVLSPTRELAIQIHNVIRNLGTYM-NIHTHACIGGKQVGDDLKKLNQGQHIVSGT 150

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  +IK + L   +V++ I+DEAD+L+  GF E I  IY  LP   Q++VVSAT + 
Sbjct: 151 PGRVLDVIKRRNLATRNVQMLILDEADELMTKGFKEQIYEIYRHLPSTVQVVVVSATLTR 210

Query: 205 DNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQ 262
           + L    K+  DP  +L++ ED T  L G+KQ      +C+    ++      L  L   
Sbjct: 211 EVLEITSKFTTDPVKILVKKEDVT--LEGIKQYHI---QCEKEEWKF----DTLCDLYDS 261

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               Q VIF N + +   + + L  ANF    + G   Q+ R + ++ F+ G  R+L++T
Sbjct: 262 LTITQAVIFCNTKSKVNWLADQLRKANFAVSSMHGDMKQEERDSIMNDFRTGNSRVLIST 321

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           D+ ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G+ I +++ + + +   L
Sbjct: 322 DVWARGIDVQQVSLVINYDLPLDKENYVHRIGRSGRFGRKGVAINLITKDDVAEMKDL 379


>gi|388857399|emb|CCF49073.1| probable translation initiation factor eIF-4A [Ustilago hordei]
          Length = 397

 Score =  214 bits (544), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   I   
Sbjct: 31  LKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQS-IDTT 89

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+A+QI  VV ++G ++ N+     IGGT V    R +     IV G
Sbjct: 90  LRETQALVLSPTRELAIQIQSVVLALGDYL-NVQCHACIGGTSVGEDIRKLDYGQHIVSG 148

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ ++L   ++++ I+DE+D+L+N GF + I  +Y  LPP  Q++++SAT  
Sbjct: 149 TPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFKDQIYDVYRYLPPSTQVVLLSATLP 208

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            D L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 209 QDVLEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 258

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +   NF    + G   QK R   +  F++G  R+L+
Sbjct: 259 DTLTITQAVIFCNTRRKVDWLSGKMKENNFQVSSMHGEMQQKERDEVMAEFRQGSSRVLI 318

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID AN+ LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 319 TTDVWARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTVDDV 372


>gi|343427879|emb|CBQ71405.1| probable translation initiation factor eIF-4A [Sporisorium
           reilianum SRZ2]
          Length = 401

 Score =  214 bits (544), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   ++ G D I Q++SGTGK+  F ++ L   I   
Sbjct: 35  LKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQS-IDTT 93

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+A+QI  VV ++G ++ N+     IGGT V    R +     IV G
Sbjct: 94  LRETQALVLSPTRELAIQIQSVVLALGDYL-NVQCHACIGGTSVGEDIRKLDYGQHIVSG 152

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ ++L   ++++ I+DE+D+L+N GF + I  +Y  LPP  Q++++SAT  
Sbjct: 153 TPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFKDQIYDVYRYLPPSTQVVLLSATLP 212

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            D L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 213 QDVLEMTSKFMTDPVRILVKRDELTLDGIKQFFVAVEK----------EEWKFDTLCDLY 262

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +   NF    + G   QK R   +  F++G  R+L+
Sbjct: 263 DTLTITQAVIFCNTRRKVDWLSAKMKENNFQVSSMHGEMQQKERDEVMAEFRQGSSRVLI 322

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID AN+ LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 323 TTDVWARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTVDDV 376


>gi|496902|emb|CAA56074.1| translation initiation factor [Homo sapiens]
          Length = 411

 Score =  213 bits (543), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LP   Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPSATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+G+YG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGQYGRKGVAINFVKNDDI 386


>gi|187957004|gb|AAI58084.1| EG434080 protein [Mus musculus]
          Length = 411

 Score =  213 bits (543), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 124/379 (32%), Positives = 207/379 (54%), Gaps = 23/379 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRSLPTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M  P+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF   + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +     +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI----RI 388

Query: 381 MGEINLDHAFNVGLVPDNL 399
           + +I   ++  +  +P NL
Sbjct: 389 LRDIEQYYSTQIDEMPMNL 407


>gi|406866441|gb|EKD19481.1| eukaryotic initiation factor 4A-12 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 399

 Score =  213 bits (543), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 126/379 (33%), Positives = 211/379 (55%), Gaps = 23/379 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I   
Sbjct: 32  LKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISML-QVIDTA 90

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     IV G
Sbjct: 91  VRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHIVSG 149

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSAT  
Sbjct: 150 TPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLP 209

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L  L 
Sbjct: 210 YDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFDTLCDLY 259

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + + +  ANF    + G   QK R + +  F++G  R+L+
Sbjct: 260 DTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLI 319

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           +TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +     +
Sbjct: 320 STDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV----RI 375

Query: 381 MGEINLDHAFNVGLVPDNL 399
           + +I L ++  +  +P N+
Sbjct: 376 LRDIELYYSTQIDEMPMNV 394


>gi|302408591|ref|XP_003002130.1| ATP-dependent RNA helicase FAL1 [Verticillium albo-atrum VaMs.102]
 gi|261359051|gb|EEY21479.1| ATP-dependent RNA helicase FAL1 [Verticillium albo-atrum VaMs.102]
          Length = 401

 Score =  213 bits (543), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 29  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 86

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 87  QVIDTAVRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 145

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 146 QHIVSGTPGRVADMIRRRDLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 205

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K  
Sbjct: 206 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EDWKFD 255

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F++G
Sbjct: 256 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQG 315

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 316 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 375

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 376 ----RILRDIELYYSTQIDEMPMNV 396


>gi|452841316|gb|EME43253.1| hypothetical protein DOTSEDRAFT_72604 [Dothistroma septosporum
           NZE10]
          Length = 400

 Score =  213 bits (543), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 130/385 (33%), Positives = 213/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L 
Sbjct: 28  FEAMHLKENLLR-GIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL- 85

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT V    R +   
Sbjct: 86  QVIDTAVRETQALVLSPTRELATQIQSVLLALGDYM-NVQCHACIGGTNVGEDIRKLDYG 144

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 145 QHVVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 204

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 205 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 254

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + + +ANF    + G   QK R + +  F++G
Sbjct: 255 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGEMPQKERDSIMGEFRQG 314

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +
Sbjct: 315 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV 374

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 375 ----RILRDIELYYSTQIDEMPMNV 395


>gi|338210794|ref|YP_004654843.1| DEAD/DEAH box helicase [Runella slithyformis DSM 19594]
 gi|336304609|gb|AEI47711.1| DEAD/DEAH box helicase domain protein [Runella slithyformis DSM
           19594]
          Length = 570

 Score =  213 bits (542), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 127/366 (34%), Positives = 202/366 (55%), Gaps = 28/366 (7%)

Query: 18  IDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVV 77
           ++VLF++  L E+ I + + E GF K SPIQ  A P +L G D + Q+++GTGK+  F +
Sbjct: 1   MEVLFDSLGLSEE-ILKAVTEMGFTKPSPIQAEAIPSLLEGRDVLGQAQTGTGKTAAFGI 59

Query: 78  AALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP 137
            AL K + +  ++ Q ++L PTRE+AVQ+T+ +R +  + K L ++   GG  +ER  R 
Sbjct: 60  PALEK-VDISDKRTQVLMLCPTRELAVQVTEELRRIAKYKKGLKLETVYGGDSIERQIRS 118

Query: 138 V----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMK 193
           +    QIVVG+PGR+  +I+ K L +D V   ++DEAD++++ GF EDI  I   +P  +
Sbjct: 119 LKIGAQIVVGTPGRVMDLIERKALKLDFVNYVVLDEADEMLDMGFREDIDTILESVPDER 178

Query: 194 QMLVVSATYSHDNLATLQKYMVDPLLIR-------PEDATRPLLGVKQLVALIPECKNPS 246
           Q ++ SAT S   +   QK+  DP+ I+        E+  +    VKQ   +   C+   
Sbjct: 179 QTVLFSATMSKPIMGIAQKFQEDPVQIKITRKEVTNENIEQTYFEVKQRGKIEVTCR--- 235

Query: 247 LRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLA 306
                       +L      Q +IF N + + + + E L++  +  E L G   Q  R  
Sbjct: 236 ------------VLDAYDLKQVIIFCNTKRKVDEVTEELSSKGYSVESLHGDLRQTQRNQ 283

Query: 307 SLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVI 366
            +  F+ G   ILV TD+AARGID + +D VIN ++P D   Y+HR+GR GR G  G  +
Sbjct: 284 VMAKFRSGAANILVATDVAARGIDVSGIDAVINFDLPLDEEYYVHRIGRTGRAGLTGKAL 343

Query: 367 TIVSAE 372
           T+V+ +
Sbjct: 344 TLVAKD 349


>gi|218505708|ref|NP_001136206.1| predicted gene, EG668137 [Mus musculus]
          Length = 411

 Score =  213 bits (542), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 124/379 (32%), Positives = 207/379 (54%), Gaps = 23/379 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +ILAPTRE+AVQI   + ++G ++ N+     +GGT V    R +     +V G
Sbjct: 104 VRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACVGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q+++VSAT  
Sbjct: 163 TPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M  P+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF   + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           +TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V  + +     +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI----RI 388

Query: 381 MGEINLDHAFNVGLVPDNL 399
           + +I   ++  +  +P NL
Sbjct: 389 LRDIEQYYSTQIDEMPMNL 407


>gi|308485730|ref|XP_003105063.1| hypothetical protein CRE_20763 [Caenorhabditis remanei]
 gi|308257008|gb|EFP00961.1| hypothetical protein CRE_20763 [Caenorhabditis remanei]
          Length = 401

 Score =  213 bits (542), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 122/357 (34%), Positives = 199/357 (55%), Gaps = 23/357 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A P +L   D I Q++SGTGK+  F ++ L  L    
Sbjct: 33  LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQTL-DTQ 91

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT +    R +     +V G
Sbjct: 92  VRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 150

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   +++L ++DEAD+++N GF E +  IY  LPP  Q++++SAT  
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 210

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQL 259
           H+ L    K+M DP+ I  +     L G+KQ               VD+E+     L+ L
Sbjct: 211 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDKEEWKFDTLIDL 259

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q V+F N + + + + + +  ANF    + G  +QK R   +  F+ G  R+L
Sbjct: 260 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 319

Query: 320 VTTDLAARGIDAANVDL--VINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           ++TD+ ARG+D   V L  VIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 320 ISTDVWARGLDVPQVSLVSVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 376


>gi|50420221|ref|XP_458643.1| DEHA2D04048p [Debaryomyces hansenii CBS767]
 gi|74602737|sp|Q6BT27.1|FAL1_DEBHA RecName: Full=ATP-dependent RNA helicase FAL1
 gi|49654310|emb|CAG86782.1| DEHA2D04048p [Debaryomyces hansenii CBS767]
          Length = 399

 Score =  213 bits (541), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 127/347 (36%), Positives = 200/347 (57%), Gaps = 17/347 (4%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I    +  Q 
Sbjct: 39  KGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGML-EVIDTKSKDCQA 97

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGSPGRIK 149
           +IL+PTRE+A QI  VV+ +G ++ N+H    IGGT V    ++ ++  QIV G+PGR+ 
Sbjct: 98  LILSPTRELAQQIQSVVKHLGDYM-NVHTHACIGGTHVGEDIKKLQQGQQIVSGTPGRVV 156

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MIK + L   ++++ I+DEAD+L+  GF E I  IY  LPP  Q++VVSAT S + L  
Sbjct: 157 DMIKRRNLATRNIKMMILDEADELMTKGFKEQIYEIYRYLPPGVQVVVVSATLSREVLEV 216

Query: 210 LQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
             K+  DP  +L++ +D T  L G+KQ      +C+    ++      L  L       Q
Sbjct: 217 TGKFTTDPVKILVKRDDIT--LEGIKQYHI---QCEKEDWKF----DTLCDLYDSLTITQ 267

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            VIF N +++   + + +  ANF    + G   Q  R + ++ F+ G  R+L++TD+ AR
Sbjct: 268 AVIFCNTKVKVNWLTDQMKKANFTVVAMHGDMKQDERDSIMNDFRTGNSRVLISTDVWAR 327

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           GID   V LVIN ++P D   Y+HR+GR+GR+G +G+ I +V+ E +
Sbjct: 328 GIDVQQVSLVINYDLPTDKENYVHRIGRSGRFGRKGVAINLVTKEDV 374


>gi|336373739|gb|EGO02077.1| hypothetical protein SERLA73DRAFT_177808 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336386557|gb|EGO27703.1| hypothetical protein SERLADRAFT_461600 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 396

 Score =  213 bits (541), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 121/358 (33%), Positives = 201/358 (56%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ +++ + +G+    F K S IQ  A   +  G D I Q++SGTGK+  F ++ L   
Sbjct: 26  DELNLKEDLLRGVYAYNFEKPSAIQQRAIRPITQGRDVIAQAQSGTGKTATFSISILQS- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I + V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT +    R ++    
Sbjct: 85  IDVSVRETQALVLSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLEYGQH 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++S
Sbjct: 144 VVSGTPGRVFDMIRRRALRTRNIKMLVLDEADELLNKGFKDQIYDVYRYLPPATQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  +D L    K+M DP+ I  +     L G+KQ    + +          E+ K   L
Sbjct: 204 ATLPYDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EDWKFDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  
Sbjct: 254 CDLYDTLTITQAVIFCNTRRKVDWLTEKMRAANFTVSSMHGEMVQKERDAIMAEFRGGTS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 RVLITTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTVDDV 371


>gi|410981978|ref|XP_003997341.1| PREDICTED: eukaryotic initiation factor 4A-III [Felis catus]
          Length = 440

 Score =  212 bits (540), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 192/343 (55%), Gaps = 19/343 (5%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L  L  + V++ Q 
Sbjct: 79  RGISSYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCL-DIQVRETQA 137

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIK 149
           +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G+PGR+ 
Sbjct: 138 LILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVF 196

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  H+ L  
Sbjct: 197 DMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEM 256

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFN 266
             K+M DP+ I  +     L G+KQ    +            EE K   L  L       
Sbjct: 257 TNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTIT 306

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L++TD+ A
Sbjct: 307 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 366

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           RG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 367 RGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 409


>gi|389609093|dbj|BAM18158.1| DEAD box ATP-dependent RNA helicase [Papilio xuthus]
 gi|389610941|dbj|BAM19081.1| DEAD box ATP-dependent RNA helicase [Papilio polytes]
          Length = 405

 Score =  212 bits (540), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 122/370 (32%), Positives = 203/370 (54%), Gaps = 20/370 (5%)

Query: 13  DVLSNIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGK 71
           D   +++V+   D + +   + +G+   GF K S IQ  +   ++ G D I Q++SGTGK
Sbjct: 23  DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSIQPIVKGRDVIAQAQSGTGK 82

Query: 72  SIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV 131
           +  F ++ L  L    +++ Q ++L+PTRE+A QI  V+ ++G  + N+     IGGT +
Sbjct: 83  TATFSISILQSL-DTTLRETQVLVLSPTRELATQIQKVILALGDFM-NVQCHACIGGTNL 140

Query: 132 ERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYS 187
               R +     +V G+PGR+  MI+ + L   S+++ ++DEAD+++N GF E I  +Y 
Sbjct: 141 GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 200

Query: 188 QLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSL 247
            LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +        
Sbjct: 201 YLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER------ 254

Query: 248 RYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKAR 304
               EE K   L  L       Q VIF N + + + + + +  ANF    + G   QK R
Sbjct: 255 ----EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKER 310

Query: 305 LASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGL 364
              +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+
Sbjct: 311 DNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV 370

Query: 365 VITIVSAESL 374
            I  V ++ +
Sbjct: 371 AINFVKSDDI 380


>gi|290987403|ref|XP_002676412.1| predicted protein [Naegleria gruberi]
 gi|284090014|gb|EFC43668.1| predicted protein [Naegleria gruberi]
          Length = 407

 Score =  212 bits (539), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 131/365 (35%), Positives = 206/365 (56%), Gaps = 28/365 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNG---YDAIVQSKSGTGKSIVFVVAAL 80
           +D+ +++ + +G+   GF K S IQ  A   +       D I Q++SGTGK+  F ++ L
Sbjct: 32  DDMNLKEDLLRGIYSYGFEKPSIIQQRAILPITTSEPPADVIGQAQSGTGKTATFTISLL 91

Query: 81  NKL-IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----K 135
            +L I   V QPQ ++LAPTRE+A QI  V+ S+G ++K + V   +GGT+V+      +
Sbjct: 92  QRLNISPDVIQPQGLVLAPTRELAQQIHKVIMSLGEYMK-VKVHACVGGTKVQHDIAILE 150

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
             V I+VG+PGR+  MI+  +LN++S+++ ++DEAD++++ GF + I  I+  LP   Q+
Sbjct: 151 EGVHIIVGTPGRVFHMIQSGHLNVNSIKMLVIDEADEMLSRGFKDQIYAIFKNLPQDMQV 210

Query: 196 LVVSATYSHDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEE 253
            + SAT   + L    K+M DP+  L++ E+ T  L G+KQ               VD E
Sbjct: 211 CLFSATMPTEVLEITDKFMRDPIRILVKKEELT--LEGIKQFYI-----------SVDRE 257

Query: 254 ----KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
               + L  L      +QCVIF N + + E + E L   +F    + G  D K R   + 
Sbjct: 258 DYKFETLCDLYKVLTISQCVIFCNSRKKVEQLAEQLNKKDFTVSCMHGEMDPKDRELIMH 317

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+    R+L+TTDL ARGID  +V LVIN ++P     YLHR+GR+GRYG +G+ I  V
Sbjct: 318 EFRTSASRVLITTDLLARGIDVHHVSLVINFDLPRHKENYLHRIGRSGRYGRKGVAINFV 377

Query: 370 SAESL 374
           + + +
Sbjct: 378 TKDDV 382


>gi|163838674|ref|NP_001106217.1| eukaryotic initiation factor 4A-III [Bombyx mori]
 gi|110376569|gb|ABG73410.1| eIF4AIII protein [Bombyx mori]
          Length = 405

 Score =  212 bits (539), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 123/370 (33%), Positives = 203/370 (54%), Gaps = 20/370 (5%)

Query: 13  DVLSNIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGK 71
           D   +++V+   D + +   + +G+   GF K S IQ  +   ++ G D I Q++SGTGK
Sbjct: 23  DTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQRSILPIVKGRDVIAQAQSGTGK 82

Query: 72  SIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV 131
           +  F ++ L  L    +++ Q +IL+PTRE+A QI  V+ ++G  + N+     IGGT +
Sbjct: 83  TATFSISILQTL-DTTLRETQVLILSPTRELATQIQKVILALGDFM-NVQCHACIGGTNL 140

Query: 132 ERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYS 187
               R +     +V G+PGR+  MI+ + L   S+++ ++DEAD+++N GF E I  +Y 
Sbjct: 141 GEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEADEMLNKGFKEQIYDVYR 200

Query: 188 QLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSL 247
            LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +        
Sbjct: 201 YLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVER------ 254

Query: 248 RYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKAR 304
               EE K   L  L       Q VIF N + + + + + +  ANF    + G   QK R
Sbjct: 255 ----EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSSMHGDMPQKER 310

Query: 305 LASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGL 364
              +  F+ G+ R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+
Sbjct: 311 DNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV 370

Query: 365 VITIVSAESL 374
            I  V ++ +
Sbjct: 371 AINFVKSDDI 380


>gi|328849915|gb|EGF99087.1| hypothetical protein MELLADRAFT_50777 [Melampsora larici-populina
           98AG31]
          Length = 395

 Score =  212 bits (539), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 121/348 (34%), Positives = 191/348 (54%), Gaps = 19/348 (5%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+    F K S IQ  A   +  G D I Q++SGTGK+  F ++ L   I   +++ Q 
Sbjct: 35  RGIYAYNFEKPSAIQQRAILPITKGRDVIAQAQSGTGKTATFSISILQS-IDTQIRETQA 93

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIK 149
           ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +V G+PGR+ 
Sbjct: 94  LVLSPTRELATQIQSVILALGDYM-NIQCHACIGGTSIGEDIRKLDHGQHVVSGTPGRVY 152

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++V+SAT  +D L  
Sbjct: 153 DMIRRRNLRTRNIKMLVLDEADELLNLGFKDQIYDVYRYLPPQTQVVVLSATLPYDVLEM 212

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFN 266
             K+M DP+ I  +     L G+KQ    + +          EE K   L  L       
Sbjct: 213 TTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLYDTLTIT 262

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q VIF N + + + + E +  ANF    + G   QK R   +  F+ G  R+L+TTD+ A
Sbjct: 263 QAVIFCNTRRKVDWLTEKMREANFTVSSMHGDMPQKERDTIMGEFRNGTSRVLITTDVWA 322

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           RGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 323 RGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTNEDV 370


>gi|168067781|ref|XP_001785785.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662575|gb|EDQ49411.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 395

 Score =  212 bits (539), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +G+   GF K S IQ  A   +++G DAI Q++SGTGK+ + +   + ++I + 
Sbjct: 29  IREDLLRGIYAYGFEKPSAIQQRAVMPIISGRDAIAQAQSGTGKTSM-IALTVCQMIDIA 87

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G  + N+     IGG  +    R     V +V G
Sbjct: 88  TREVQALILSPTRELAAQTEKVILAIGDFM-NVQAHACIGGKSIGEDIRKLEYGVHVVSG 146

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   S++L I+DE+D++++ GF + I  +Y  LPP  Q+++VSAT  
Sbjct: 147 TPGRVYDMIKRRTLRTRSIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLVSATLP 206

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 207 HEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 256

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + + NF    + G   QK R A +  F+ G  R+L+
Sbjct: 257 DTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIMAEFRSGTTRVLI 316

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 317 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRSDDI 370


>gi|325188274|emb|CCA22814.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 414

 Score =  212 bits (539), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 126/368 (34%), Positives = 208/368 (56%), Gaps = 21/368 (5%)

Query: 12  KDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           KD+ SN D + +  + + + + + +G+   GF K S IQ  A   +L G+D I Q++SGT
Sbjct: 30  KDIESNWDEVIDTFDAMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGT 89

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F V+ L K I + +++ Q +ILAPTRE+A QI  V+ ++G ++ +++V   +GGT
Sbjct: 90  GKTATFTVSILQK-ININLKETQALILAPTRELAQQIVKVIAAIGDYM-SINVHACVGGT 147

Query: 130 QVERP----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            V       ++ V IVVG+PGR+  MI    L  ++V++F++DEAD++++ GF + I  +
Sbjct: 148 AVRDDIHTLQQGVHIVVGTPGRVGDMINQGALRTEAVKMFVLDEADEMLSRGFQDQIYDV 207

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           +  LP   Q+ + SAT   + L   QK+M DP+ I  +     L G+KQ    I      
Sbjct: 208 FRFLPESVQVALFSATMPQEVLEVTQKFMRDPIRIMVKRDELTLEGIKQFFVAIER---- 263

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
                 EE K   L  L       Q +I+ N + + + + E + + +F    + G  DQ+
Sbjct: 264 ------EEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMDQR 317

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R   +  F+ G  R+L+TTDL ARGID   V LV+N ++P +   Y+HR+GR+GR+G +
Sbjct: 318 QRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVVNYDLPLNRENYIHRIGRSGRFGRK 377

Query: 363 GLVITIVS 370
           G+ I  ++
Sbjct: 378 GVAINFLT 385


>gi|225719408|gb|ACO15550.1| Eukaryotic initiation factor 4A-III [Caligus clemensi]
          Length = 403

 Score =  212 bits (539), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 195/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  +   +L G D I Q++SGTGK+  F ++ L   I   
Sbjct: 37  LREDLLRGIYAYGFEKPSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQS-IDTS 95

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+AVQI  V+ ++G ++ N+     IGGT +    R +     +V G
Sbjct: 96  LRETQCLVLSPTRELAVQIQKVLLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 154

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ ++DEAD+++N GF E I  +Y  LPP  Q+ ++SAT  
Sbjct: 155 TPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPPFTQICLISATLP 214

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 215 HEILEMTSKFMADPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 264

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R   +  F+ G+ R+L+
Sbjct: 265 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDVPQKERDDIMKEFRSGQSRVLI 324

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 325 TTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDI 378


>gi|302754310|ref|XP_002960579.1| hypothetical protein SELMODRAFT_164382 [Selaginella moellendorffii]
 gi|302771598|ref|XP_002969217.1| hypothetical protein SELMODRAFT_91413 [Selaginella moellendorffii]
 gi|300162693|gb|EFJ29305.1| hypothetical protein SELMODRAFT_91413 [Selaginella moellendorffii]
 gi|300171518|gb|EFJ38118.1| hypothetical protein SELMODRAFT_164382 [Selaginella moellendorffii]
          Length = 401

 Score =  212 bits (539), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 198/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +G+ E GF + S IQ  A   ++ G D I Q++SGTGK+ +  +A +N+LI   
Sbjct: 35  INESLLRGVFEYGFERPSAIQQRALIPIMRGRDVIAQAQSGTGKTSMIGIA-VNQLIDTS 93

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRPVQIVVG 143
           V++ Q ++L+PTRE+A Q   VV ++G+H+ N+     IGG      + + +  V +V G
Sbjct: 94  VREVQALVLSPTRELADQTAKVVLTLGSHM-NVQAHTCIGGKSFSEDIRKLEHGVHVVSG 152

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  M+K +      V++ ++DE+D++++ GF E I   Y  LPP  Q+++VSAT  
Sbjct: 153 TPGRVYDMLKRRTFRTRHVKILVLDESDEMLSRGFKEQIIDCYRYLPPDLQVVLVSATLP 212

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 213 HEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 262

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + E + E + ++NF    + G   QK R   +  F+ G+ R+L+
Sbjct: 263 DTLTITQAVIFCNTKRKVEWLSEKMRSSNFTVSSMHGEMPQKERDTIMKEFREGQTRVLI 322

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P+    Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 323 TTDVWARGLDVQQVSLVINYDLPNSRELYIHRIGRSGRFGRKGVAINFVKNDDI 376


>gi|168056517|ref|XP_001780266.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668320|gb|EDQ54930.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 397

 Score =  211 bits (538), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 122/354 (34%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +G+   GF K S IQ  A   +++G DAI Q++SGTGK+ + +  A+ ++I   
Sbjct: 31  IREDLLRGIYAYGFEKPSAIQQRAVMPIISGRDAIAQAQSGTGKTSM-IALAVCQMIDTA 89

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G  + N+     IGG  +    R     V +V G
Sbjct: 90  TREVQALILSPTRELAAQTEKVILAIGDFM-NVQAHACIGGKSIGEDIRKLEYGVHVVSG 148

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   S++L I+DE+D++++ GF + I  +Y  LPP  Q+++VSAT  
Sbjct: 149 TPGRVYDMIKRRTLRTRSIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLVSATLP 208

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 209 HEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 258

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + + NF    + G   QK R A +  F+ G  R+L+
Sbjct: 259 DTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQKERDAIMAEFRSGTTRVLI 318

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 319 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRSDDI 372


>gi|358056097|dbj|GAA97951.1| hypothetical protein E5Q_04631 [Mixia osmundae IAM 14324]
          Length = 650

 Score =  211 bits (538), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/355 (35%), Positives = 199/355 (56%), Gaps = 25/355 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   +  G+D I Q++SGTGKS  F ++AL + I + 
Sbjct: 26  LKEDLLRGIYAYNFEKPSAIQQRAIIPITKGHDVIAQAQSGTGKSATFAISAL-QTIDIN 84

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVG 143
           +++ Q ++L+PTRE+A Q    V ++G ++ N+     IGGT +    R ++    +V G
Sbjct: 85  LRETQALVLSPTRELATQHVSTVLALGDYM-NVQAWACIGGTSIGEDIRKLEHGQHVVSG 143

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+L+N GF + I  +Y  LPP  Q++++SAT  
Sbjct: 144 TPGRVFDMIRRRSLRTRNIKMLVLDEADELLNQGFKDQIYDVYRYLPPDTQVVLLSATLP 203

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LV 257
           HD L    K+M DP+ I  +     L G+KQ              +V  EK+      L 
Sbjct: 204 HDVLEMTAKFMTDPVRILVKRDELTLEGIKQF-------------FVAVEKEDWKFDTLC 250

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + E L  ANF    + G   QK R A +  F++G  R
Sbjct: 251 DLYDTLTITQAVIFCNTRRKVDWLTEKLREANFTVSSMHGEMPQKERDAIMAEFRQGASR 310

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           +L+TTD+ ARGID   V LVIN ++P+    YLHR+GR+GR+G +G+ I  V+ E
Sbjct: 311 VLITTDVWARGIDVQQVSLVINYDLPNARENYLHRIGRSGRFGRKGVAINFVTNE 365


>gi|61679843|pdb|1S2M|A Chain A, Crystal Structure Of The Dead Box Protein Dhh1p
          Length = 400

 Score =  211 bits (538), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 135/388 (34%), Positives = 205/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 11  QTDDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGT 69

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 70  GKTAAFVIPTLEK-VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 127

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V I+VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 128 NLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQI 187

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
            S LPP  Q L+ SAT+       + K++  P  I   E+ T  L G+ Q  A       
Sbjct: 188 LSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELT--LKGITQYYA------- 238

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 239 ----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 294

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 295 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 354

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 355 LGLAINLINWNDRFNLYKIEQELGTEIA 382


>gi|332285792|ref|YP_004417703.1| ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
 gi|330429745|gb|AEC21079.1| putative ATP-dependent RNA helicase [Pusillimonas sp. T7-7]
          Length = 550

 Score =  211 bits (538), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 192/342 (56%), Gaps = 22/342 (6%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ---PQTIIL 96
           GF + + +Q AA P  L G+D +V S++G+GK+  F++ ALN++  +P  +    Q ++L
Sbjct: 20  GFTEPTSVQAAAIPKALAGHDLMVSSQTGSGKTAAFMLPALNRISNMPPNKGSGVQVLVL 79

Query: 97  APTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVGSPGRIKQMI 152
            PTRE+A+Q+ +  +  GAH+K+L     +GG     Q++   R V ++V +PGR+   +
Sbjct: 80  TPTRELAMQVAEATKQYGAHLKDLRTAVVVGGMPYGAQLKALSRRVDVLVATPGRLIDHL 139

Query: 153 KLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQK 212
           + K +N+ +V   ++DEAD++++ GF+EDI  I  + P  +Q L+ SAT          K
Sbjct: 140 QAKRVNLSTVHTLVLDEADRMLDMGFIEDIETIVGRTPSDRQTLLFSATLDGTIARLAAK 199

Query: 213 YMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEE----KKLVQLLSQTPFNQC 268
            M DPL I        + G KQ    I +    SL Y D+     + L  LL  +  +Q 
Sbjct: 200 MMRDPLQIE-------ISGQKQKHTNITQ----SLLYADDNGHKMRLLDHLLRDSNLDQA 248

Query: 269 VIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARG 328
           ++F++ +   + + + LA+  F A  L G  +Q+ R  +L   ++GK+RILV TD+AARG
Sbjct: 249 IVFTSTKRGADDLADRLADQGFAAAALHGDMNQRQRTRTLGMLQKGKLRILVATDVAARG 308

Query: 329 IDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           ID   +   +N ++P  A  Y+HR+GR GR G  GL  T+ +
Sbjct: 309 IDVQGISHAVNYDLPMQAEDYVHRIGRTGRAGRSGLAYTLAT 350


>gi|346975524|gb|EGY18976.1| ATP-dependent RNA helicase FAL1 [Verticillium dahliae VdLs.17]
          Length = 400

 Score =  211 bits (537), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/363 (35%), Positives = 202/363 (55%), Gaps = 26/363 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 29  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 86

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 87  QVIDTAVRESQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 145

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 146 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 205

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ              ++  EK+  
Sbjct: 206 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQY-------------FIAVEKEDW 252

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F
Sbjct: 253 KFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDF 312

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           ++G  R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++
Sbjct: 313 RQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS 372

Query: 372 ESL 374
           E +
Sbjct: 373 EDV 375


>gi|308804852|ref|XP_003079738.1| DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 (ISS)
           [Ostreococcus tauri]
 gi|116058195|emb|CAL53384.1| DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 (ISS)
           [Ostreococcus tauri]
          Length = 1045

 Score =  211 bits (537), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 208/371 (56%), Gaps = 16/371 (4%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE D+ ++    + L+  G+   SP+Q +  P    G D + Q+KSGTGK++ F +    
Sbjct: 38  FE-DLRLDHTFVRALRRCGYDAASPVQASTVPLGRFGCDVLAQAKSGTGKTMAFAIVVAE 96

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSV--------GAHVKN-LHVDYFIGG--TQ 130
           + ++   ++ Q + LAPTRE A Q  D V  +        G+ V+  +     +GG  T+
Sbjct: 97  R-VEAGRRRTQALALAPTRESATQTRDCVERLIEGFREVDGSDVRGEMTCALLVGGLPTK 155

Query: 131 VERPKRPVQ--IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
            +R +  +Q  +VVG+PGR +QM++   +  D +RL I+DEAD L+   F  D+ + Y+ 
Sbjct: 156 EDRRRLALQPHVVVGTPGRTRQMMEEGAMACDGIRLLILDEADALLTGTFERDVLFAYNM 215

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LP  KQ+   SATYS + +  L++ M  P  +   ++T  L GV+Q  +L+ E K   + 
Sbjct: 216 LPERKQVCAFSATYSRELIRDLERLMRSPQKVMLCESTTALKGVRQFYSLVEETKLADV- 274

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
              +E +L+++     F+Q V+F       E + + L +    A + +G   Q+ R+  +
Sbjct: 275 IAAKEARLLKIFDDVAFHQAVVFVRRLAWGEALAKRLTSQGVKAAFTAGVLPQERRMKVM 334

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
           +  +  ++R+LV+TDL ARG+D  +V+LV+NL++P   ATY+HR+GR GR+GT GL + +
Sbjct: 335 EDMRNFQLRVLVSTDLTARGVDLTHVNLVVNLDVPPSGATYMHRVGRTGRFGTYGLSVAV 394

Query: 369 VSAESLVKFHS 379
           ++A  L +  S
Sbjct: 395 LTAGELEQLQS 405


>gi|261212543|ref|ZP_05926828.1| cold-shock DEAD-box protein A [Vibrio sp. RC341]
 gi|260838474|gb|EEX65130.1| cold-shock DEAD-box protein A [Vibrio sp. RC341]
          Length = 639

 Score =  211 bits (537), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPETAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|449461689|ref|XP_004148574.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Cucumis sativus]
 gi|449508400|ref|XP_004163303.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Cucumis sativus]
          Length = 410

 Score =  211 bits (537), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+ + +   + +++   
Sbjct: 44  IKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSM-IALTVCQMVDTT 102

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G ++ N+     IGG  V    R     VQ+V G
Sbjct: 103 SREVQALILSPTRELATQTEKVILAIGDYI-NIQAHACIGGKSVGEDIRKLEFGVQVVSG 161

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++L ++DE+D++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 162 TPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 221

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 222 HEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 271

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + E + E + + NF   ++ G   QK R A +  F+ G  R+L+
Sbjct: 272 DTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLI 331

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 332 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 385


>gi|308498555|ref|XP_003111464.1| hypothetical protein CRE_03767 [Caenorhabditis remanei]
 gi|308241012|gb|EFO84964.1| hypothetical protein CRE_03767 [Caenorhabditis remanei]
          Length = 405

 Score =  211 bits (537), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 122/358 (34%), Positives = 198/358 (55%), Gaps = 24/358 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A P +L   D I Q++SGTGK+  F ++ L  L    
Sbjct: 36  LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSL-DTQ 94

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT +    R +     +V G
Sbjct: 95  VRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYGQHVVSG 153

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   +++L ++DEAD+++N GF E +  IY  LPP  Q++++SAT  
Sbjct: 154 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 213

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQL 259
           H+ L    K+M DP+ I  +     L G+KQ               VD E+     L+ L
Sbjct: 214 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDREEWKFDTLIDL 262

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q V+F N + + + + + +  ANF    + G  +QK R   +  F+ G  R+L
Sbjct: 263 YDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVL 322

Query: 320 VTTDLAARGIDAANVDL---VINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           ++TD+ ARG+D   V L   VIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 323 ISTDVWARGLDVPQVSLVSNVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 380


>gi|258624003|ref|ZP_05718956.1| ATP-dependent RNA helicase DeaD [Vibrio mimicus VM603]
 gi|258583797|gb|EEW08593.1| ATP-dependent RNA helicase DeaD [Vibrio mimicus VM603]
          Length = 663

 Score =  211 bits (537), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 29  SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 88

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 89  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 208 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 259

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 320 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 380 IERVTRSSMEEIQLPH 395


>gi|380018375|ref|XP_003693105.1| PREDICTED: probable ATP-dependent RNA helicase DDX20-like [Apis
           florea]
          Length = 260

 Score =  211 bits (537), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 112/247 (45%), Positives = 159/247 (64%), Gaps = 5/247 (2%)

Query: 1   MAHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
           +AHDI K  RTKD+    DV F      +K I  GL   GF + SPIQ+ A P    G+D
Sbjct: 5   IAHDINKKPRTKDIKIQDDVTFFQMGFSQK-ILDGLSVCGFQRPSPIQLKAIPLGRCGFD 63

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I+++KSGTGK++VF + +L ++I + +   Q +ILAPTREIAVQI  V  SVG  +K+L
Sbjct: 64  LIMRAKSGTGKTLVFCIISL-EMIDIDISSVQVLILAPTREIAVQIAQVFSSVGCEIKDL 122

Query: 121 HVDYFIGGTQVERPKRPV---QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
            V+ FIGG  +E  K+ V   QI VG+PGRI+ +I   +L +++VRLF++DEADKL+ T 
Sbjct: 123 KVEVFIGGLAIENDKKKVNNCQIAVGAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETS 182

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F +DI +I+S+LP  KQ++  SATY  D    LQ YM  P+L+ P +    L+G++Q V 
Sbjct: 183 FQKDINYIFSKLPLSKQVIASSATYPGDLEIFLQTYMCSPVLVSPNNNEPILIGLRQFVT 242

Query: 238 LIPECKN 244
           ++P   N
Sbjct: 243 IVPSHPN 249


>gi|224009464|ref|XP_002293690.1| eukaryotic translation initiation factor 4A [Thalassiosira
           pseudonana CCMP1335]
 gi|220970362|gb|EED88699.1| eukaryotic translation initiation factor 4A [Thalassiosira
           pseudonana CCMP1335]
          Length = 369

 Score =  211 bits (537), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 125/350 (35%), Positives = 193/350 (55%), Gaps = 19/350 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +G+   GF K S IQ  A    + G D I Q++SGTGK+  F +  L KL    
Sbjct: 3   IPEELLRGIYAYGFEKPSAIQQRAIKPTMLGRDLIAQAQSGTGKTATFAIGTLAKL-DPK 61

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVG 143
           +++ Q++ILAPTRE+A QI  VV ++G +++ L V   +GGT V    R +Q    +VVG
Sbjct: 62  LRECQSLILAPTRELAQQIQKVVIALGDYME-LQVHACVGGTAVRDDIRTLQGGVHVVVG 120

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI  + L +DS+R F +DEAD++++ GF + I  I+  LP   Q+ + SAT  
Sbjct: 121 TPGRVYDMINRRALRLDSIRQFFLDEADEMLSRGFKDQIYDIFKFLPESVQVCLFSATMP 180

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL---VQLL 260
            D L   Q++M DP+ I  +     L G+KQ    +            EE KL     L 
Sbjct: 181 LDVLEVTQRFMRDPVRILVKKDELTLEGIKQFYIAVER----------EEWKLDTLCDLY 230

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q +I+ N + + + + E +   +F    + G  DQ+ R   +  F+ G  R+L+
Sbjct: 231 ETLTITQAIIYCNTRRKVDWLQEQMQERDFTVSCMHGDMDQRERDIIMREFRSGSSRVLI 290

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  ++
Sbjct: 291 TTDLLARGIDVQQVSLVINFDLPTNRENYIHRIGRSGRFGRKGVAINFLT 340


>gi|262174005|ref|ZP_06041682.1| cold-shock DEAD-box protein A [Vibrio mimicus MB-451]
 gi|261891363|gb|EEY37350.1| cold-shock DEAD-box protein A [Vibrio mimicus MB-451]
          Length = 643

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|449145896|ref|ZP_21776691.1| cold-shock DEAD-box protein A [Vibrio mimicus CAIM 602]
 gi|449078284|gb|EMB49223.1| cold-shock DEAD-box protein A [Vibrio mimicus CAIM 602]
          Length = 635

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|262403840|ref|ZP_06080398.1| cold-shock DEAD-box protein A [Vibrio sp. RC586]
 gi|262350344|gb|EEY99479.1| cold-shock DEAD-box protein A [Vibrio sp. RC586]
          Length = 643

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|258623163|ref|ZP_05718173.1| ATP-dependent RNA helicase DeaD [Vibrio mimicus VM573]
 gi|258584555|gb|EEW09294.1| ATP-dependent RNA helicase DeaD [Vibrio mimicus VM573]
          Length = 663

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 29  SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 88

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 89  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 208 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 259

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 320 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 380 IERVTRSSMEEIQLPH 395


>gi|353244300|emb|CCA75717.1| probable translation initiation factor eIF-4A, exon junction
           complex [Piriformospora indica DSM 11827]
          Length = 397

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F + S IQ  A   ++ G D I Q++SGTGK+  F ++ L   I   
Sbjct: 31  LKEDLLRGIYAYNFERPSAIQQRAIVPIVKGRDVIAQAQSGTGKTATFSISILQS-IDTN 89

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT +    R +     +V G
Sbjct: 90  LRETQALVLSPTRELATQIQSVILALGDYM-NVQCHACIGGTSIGEDIRKLDYGQHVVSG 148

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD++++ GF E I  +Y  LPP  Q++++SAT  
Sbjct: 149 TPGRVFDMIRRRNLRTRNIKMLVLDEADEMLSRGFREQIYDVYRYLPPATQVVLLSATLP 208

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 209 YDVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 258

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  R+L+
Sbjct: 259 DTLTITQAVIFCNTRRKVDWLTEKMRGANFTVSSMHGEMVQKERDAIMSEFRGGTSRVLI 318

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 319 TTDVWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTIEDV 372


>gi|262164855|ref|ZP_06032593.1| cold-shock DEAD-box protein A [Vibrio mimicus VM223]
 gi|262027235|gb|EEY45902.1| cold-shock DEAD-box protein A [Vibrio mimicus VM223]
          Length = 643

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|218193167|gb|EEC75594.1| hypothetical protein OsI_12293 [Oryza sativa Indica Group]
          Length = 404

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +G+   GF K S IQ  A   +++G D I Q++SGTGK+ + +  ++ +++   
Sbjct: 38  IREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSM-ISLSVCQIVNTA 96

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
           V++ Q +IL+PTRE+A Q   V+ ++G ++ N+ V   IGG  +    R     V +V G
Sbjct: 97  VREVQALILSPTRELAAQTERVMLAIGDYI-NIQVHACIGGKSIGEDIRKLEHGVHVVSG 155

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++L I+DEAD+++  GF + I  +Y  LPP  Q+ ++SAT  
Sbjct: 156 TPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLP 215

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 216 HEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 265

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + + NF    + G   QK R A +  F+ G  R+L+
Sbjct: 266 DTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLI 325

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  E +
Sbjct: 326 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDI 379


>gi|116787191|gb|ABK24405.1| unknown [Picea sitchensis]
          Length = 408

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 123/369 (33%), Positives = 204/369 (55%), Gaps = 24/369 (6%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+S+ D +   D L+     +G+ + GF K S IQ  A   ++NG D I Q++SGTGK+
Sbjct: 32  EVISSFDQMGIRDDLL-----RGIYQYGFEKPSAIQQRAVMPIINGRDVIAQAQSGTGKT 86

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE 132
            + +  A+ ++I   +++ Q +I++PTRE+A Q   V+ ++G  + N+     IGG  + 
Sbjct: 87  SM-IALAVCQIIDTSIREVQALIVSPTRELAAQTEKVILAIGDFI-NVQAHACIGGKSIG 144

Query: 133 RPKRP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
              R     V +V G+PGR+  MIK + L   +V+L ++DE+D++++ GF + I  +Y  
Sbjct: 145 EDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAVKLLVLDESDEMLSRGFKDQIYDVYRY 204

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +         
Sbjct: 205 LPPELQVVLISATLPHEILEITNKFMTDPVRILVKRDELTLEGIKQFFVAVER------- 257

Query: 249 YVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              EE K   L  L       Q VIF N + + + + E + + NF    + G   QK R 
Sbjct: 258 ---EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERD 314

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
           A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ 
Sbjct: 315 AIMAEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 374

Query: 366 ITIVSAESL 374
           I  V  + +
Sbjct: 375 INFVRNDDI 383


>gi|229506042|ref|ZP_04395551.1| cold-shock DEAD-box protein A [Vibrio cholerae BX 330286]
 gi|229510102|ref|ZP_04399582.1| cold-shock DEAD-box protein A [Vibrio cholerae B33]
 gi|229517768|ref|ZP_04407213.1| cold-shock DEAD-box protein A [Vibrio cholerae RC9]
 gi|229605573|ref|YP_002876277.1| cold-shock DEAD-box protein A [Vibrio cholerae MJ-1236]
 gi|229345804|gb|EEO10777.1| cold-shock DEAD-box protein A [Vibrio cholerae RC9]
 gi|229352547|gb|EEO17487.1| cold-shock DEAD-box protein A [Vibrio cholerae B33]
 gi|229356393|gb|EEO21311.1| cold-shock DEAD-box protein A [Vibrio cholerae BX 330286]
 gi|229372059|gb|ACQ62481.1| cold-shock DEAD-box protein A [Vibrio cholerae MJ-1236]
          Length = 653

 Score =  211 bits (536), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 19  SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 78

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 79  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 137

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 138 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 197

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 198 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 249

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 250 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 309

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 310 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 369

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 370 IERVTRSSMEEIQLPH 385


>gi|115453811|ref|NP_001050506.1| Os03g0566800 [Oryza sativa Japonica Group]
 gi|122246919|sp|Q10I26.1|RH34_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 34
 gi|13957631|gb|AAK50586.1|AC084404_11 putative translation initiation factor [Oryza sativa Japonica
           Group]
 gi|108709369|gb|ABF97164.1| Eukaryotic initiation factor 4A-3, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113548977|dbj|BAF12420.1| Os03g0566800 [Oryza sativa Japonica Group]
          Length = 404

 Score =  211 bits (536), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 197/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +G+   GF K S IQ  A   +++G D I Q++SGTGK+ + +  ++ +++   
Sbjct: 38  IREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSM-ISLSVCQIVDTA 96

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
           V++ Q +IL+PTRE+A Q   V+ ++G ++ N+ V   IGG  +    R     V +V G
Sbjct: 97  VREVQALILSPTRELAAQTERVMLAIGDYI-NIQVHACIGGKSIGEDIRKLEHGVHVVSG 155

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++L I+DEAD+++  GF + I  +Y  LPP  Q+ ++SAT  
Sbjct: 156 TPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLP 215

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 216 HEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 265

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + + NF    + G   QK R A +  F+ G  R+L+
Sbjct: 266 DTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLI 325

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  E +
Sbjct: 326 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDI 379


>gi|213406593|ref|XP_002174068.1| ATP-dependent RNA helicase, eIF4A related [Schizosaccharomyces
           japonicus yFS275]
 gi|212002115|gb|EEB07775.1| ATP-dependent RNA helicase, eIF4A related [Schizosaccharomyces
           japonicus yFS275]
          Length = 394

 Score =  211 bits (536), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 135/380 (35%), Positives = 204/380 (53%), Gaps = 31/380 (8%)

Query: 2   AHDIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDA 61
           + D++ CA            FE   L E  +R G+   G+   S IQ  A   +  G D 
Sbjct: 14  SEDVKACAS-----------FEEMKLKEDLLR-GIYAYGYETPSAIQSRAITQICKGRDV 61

Query: 62  IVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           I Q++SGTGK+  F +  L   I L V++ Q +IL+PTRE+AVQI +VV ++G H+ N+ 
Sbjct: 62  IAQAQSGTGKTATFSIGILQS-IDLSVRETQALILSPTRELAVQIQNVVLALGDHM-NVQ 119

Query: 122 VDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
               IGGT V    + +     +V G+PGR+  MI+ + L + +V++ ++DEAD+L+N G
Sbjct: 120 CHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRVRNVKMLVLDEADELLNRG 179

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVA 237
           F + I  IY  LPP  Q++VVSAT   D L    K+  DP+ I  +     L G+KQ   
Sbjct: 180 FKDQIYDIYRYLPPGTQVVVVSATLPQDVLELTNKFTTDPVRILVKRDELTLEGLKQYFI 239

Query: 238 LIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEY 294
            + +          EE K   L  L       Q VIF N + + + + E +  ANF    
Sbjct: 240 AVEK----------EEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLAEKMREANFTVTS 289

Query: 295 LSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           + G   QK R A +  F++G  R+L+ TD+ ARGID   V LVIN ++P +   Y+HR+G
Sbjct: 290 MHGEMPQKERDAIMQEFRQGHSRVLLCTDIWARGIDVQQVSLVINYDLPSNRENYIHRIG 349

Query: 355 RAGRYGTRGLVITIVSAESL 374
           R+GR+G +G+ I  V+ + +
Sbjct: 350 RSGRFGRKGVAINFVTNDDV 369


>gi|281203069|gb|EFA77270.1| DEAD/DEAH box helicase domain-containing protein [Polysphondylium
           pallidum PN500]
          Length = 1147

 Score =  211 bits (536), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/353 (34%), Positives = 197/353 (55%), Gaps = 25/353 (7%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + +G+   GF K S IQ  A   ++ G+D I Q++SGTGK+  F + AL   I + V+ P
Sbjct: 59  LLRGIFGFGFEKPSAIQQRAILPIIKGHDTIAQAQSGTGKTATFSIGALQS-IDVSVKSP 117

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGSPGR 147
           Q +IL+PTRE+A QI  V+ ++G  + ++ V  F+G   +     R +  V IV G+PGR
Sbjct: 118 QVLILSPTRELAQQIQKVLMALGGFM-SVQVHAFVGQKTIAEDLRRLEAGVHIVSGTPGR 176

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +  +I  K L    +++ I+DEAD+++  GF + I  +Y  LPP  Q+++VSAT + D +
Sbjct: 177 VLDLISRKALATRHIKMLILDEADEMLGLGFQQQINDVYRYLPPATQIVLVSATLTQDVI 236

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLLS 261
              +K+M DP+ I  +     L G+KQ              +V  EK+      L  +  
Sbjct: 237 NMTEKFMTDPVRILLKRDELTLEGIKQF-------------FVSVEKEEWKFGTLCDIYD 283

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
                Q VIF N + +  ++ + +  ANF    + G  +QK R   + SF+ G+ R+L+T
Sbjct: 284 SLTITQAVIFCNTKQKVNILTDKMREANFTVASMHGDMEQKEREEIIKSFRSGENRVLIT 343

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TD+ ARGID   V LVIN ++P+D   Y+HR+GR+GR+G +G+ I  V +  +
Sbjct: 344 TDILARGIDVQQVSLVINYDLPNDRENYIHRIGRSGRFGRKGVAINFVKSSDI 396


>gi|237831253|ref|XP_002364924.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
 gi|211962588|gb|EEA97783.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
 gi|221487231|gb|EEE25477.1| ATP-dependent helicase, putative [Toxoplasma gondii GT1]
 gi|221506914|gb|EEE32531.1| ATP-dependent helicase, putative [Toxoplasma gondii VEG]
          Length = 395

 Score =  210 bits (535), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 125/366 (34%), Positives = 197/366 (53%), Gaps = 20/366 (5%)

Query: 14  VLSNIDVL-FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           VL   D + F+ D+L      +G+   GF + S +Q  A   ++ G D IVQS+SGTGK+
Sbjct: 20  VLPTFDAMGFKEDLL------RGIYAYGFERPSAVQQRAIVPIMKGRDVIVQSQSGTGKT 73

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE 132
            VF +  L + I   V+ PQ +IL+PTRE+A Q   V  ++G ++ ++ V   IGG +V 
Sbjct: 74  CVFCLGCL-QCIDPKVRDPQALILSPTRELAEQSQKVCLALGDYM-SVQVHCCIGGKRVG 131

Query: 133 RPKRP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
              R     V IV G+PGR+  MI  ++ +   ++L ++DEAD+++N GF E +  IY  
Sbjct: 132 DDIRALEAGVHIVSGTPGRVFHMIAQRHFSTRHIKLLVLDEADEMLNRGFKEQVYDIYRY 191

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q+++VSAT  H+ L    K+M DP  +  +     L G+KQ    +        R
Sbjct: 192 LPPSTQVVLVSATLPHEVLEMTTKFMDDPFRVLVKRDELTLEGIKQFFVAVE-------R 244

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
              +   L  L       Q VIF N + + E + + +  ANF    + G   Q+ R   +
Sbjct: 245 EQWKFDTLTDLYDTLTITQAVIFCNTKAKVEWLAQKMKEANFTVSRMHGDMPQQERDEIM 304

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G+ R+L+ TD+  RG+D   V LVIN ++P+    Y+HR+GR+GR+G +G+ I  
Sbjct: 305 RQFRGGQSRVLIATDVWGRGLDVQQVSLVINYDLPNSRELYIHRIGRSGRFGRKGVAINF 364

Query: 369 VSAESL 374
           V  + +
Sbjct: 365 VKNDDI 370


>gi|424809183|ref|ZP_18234568.1| ATP-dependent RNA helicase DeaD [Vibrio mimicus SX-4]
 gi|342323608|gb|EGU19392.1| ATP-dependent RNA helicase DeaD [Vibrio mimicus SX-4]
          Length = 643

 Score =  210 bits (535), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|328768329|gb|EGF78376.1| eIF4AIII protein [Batrachochytrium dendrobatidis JAM81]
          Length = 445

 Score =  210 bits (535), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 192/349 (55%), Gaps = 19/349 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+    F K S IQ  A   +L G D I Q++SGTGK+  F ++ L   I   
Sbjct: 47  LKEDLLRGIFAYNFEKPSAIQQRAIAPILKGRDVIAQAQSGTGKTATFSISVLQT-IDTT 105

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
            +Q Q +IL+PTRE+A QI  VV ++G ++ N+     IGGT +    R +     +V G
Sbjct: 106 RRQTQALILSPTRELATQIQSVVLALGDYM-NVQCHACIGGTSIGEDIRKLDHGQHVVSG 164

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L    +++ I+DEAD++++ GF E I  +Y  LPP  Q++++SAT  
Sbjct: 165 TPGRVFDMIKRRNLQTRDIKMLILDEADEMLSKGFKEQIYDVYRYLPPSTQVVILSATLP 224

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           HD L    K+M DP+ +  +     L G+KQ    + +          EE K   L  L 
Sbjct: 225 HDVLDMTSKFMTDPVRVLVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 274

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  R+L+
Sbjct: 275 DTLTITQAVIFCNTRRKVDWLTEKMREANFTVAAMHGEMPQKERDAIMQEFRSGASRVLI 334

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V
Sbjct: 335 TTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFV 383


>gi|229526685|ref|ZP_04416089.1| cold-shock DEAD-box protein A [Vibrio cholerae bv. albensis VL426]
 gi|229336843|gb|EEO01861.1| cold-shock DEAD-box protein A [Vibrio cholerae bv. albensis VL426]
          Length = 651

 Score =  210 bits (535), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 203/376 (53%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 19  SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 78

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 79  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 137

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 138 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 197

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP  +    + + +  V+Q   ++        + V++++ + +L
Sbjct: 198 ATMPPMVKEIVERFLRDPECVDVAGSNQTVAKVEQQYWVV--------KGVEKDEAMARL 249

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 250 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 309

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 310 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 369

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 370 IERVTRSSMEEIQLPH 385


>gi|400596858|gb|EJP64614.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
          Length = 403

 Score =  210 bits (535), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/388 (33%), Positives = 213/388 (54%), Gaps = 30/388 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRESQALVLSPTRELATQIQSVVMALGDYL-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRHLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ              ++  EK+  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQY-------------FIAVEKEDW 253

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F
Sbjct: 254 KFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDF 313

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           ++G  R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ 
Sbjct: 314 RQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTT 373

Query: 372 ESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           + +     ++ +I L ++  +  +P N+
Sbjct: 374 DDV----RILRDIELYYSTQIDEMPMNV 397


>gi|432119077|gb|ELK38297.1| Eukaryotic initiation factor 4A-III [Myotis davidii]
          Length = 439

 Score =  210 bits (535), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 189/337 (56%), Gaps = 19/337 (5%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPT 99
           GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L  L  + V++ Q +ILAPT
Sbjct: 85  GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCL-DIQVRETQALILAPT 143

Query: 100 REIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLK 155
           RE+AVQI   + ++G ++ N+     IGGT V    R +     +V G+PGR+  MI+ +
Sbjct: 144 RELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRR 202

Query: 156 YLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMV 215
            L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M 
Sbjct: 203 SLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMT 262

Query: 216 DPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFS 272
           DP+ I  +     L G+KQ    +            EE K   L  L       Q VIF 
Sbjct: 263 DPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFC 312

Query: 273 NYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAA 332
           N + + + + E +  ANF    + G   QK R + +  F+ G  R+L++TD+ ARG+D  
Sbjct: 313 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 372

Query: 333 NVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 373 QVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 409


>gi|15601559|ref|NP_233190.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121588090|ref|ZP_01677839.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae 2740-80]
 gi|121730005|ref|ZP_01682420.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae V52]
 gi|153819412|ref|ZP_01972079.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae NCTC 8457]
 gi|153823796|ref|ZP_01976463.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae B33]
 gi|227812370|ref|YP_002812380.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae M66-2]
 gi|254849961|ref|ZP_05239311.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae MO10]
 gi|298499594|ref|ZP_07009400.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae MAK 757]
 gi|9658230|gb|AAF96702.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547686|gb|EAX57782.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae 2740-80]
 gi|121628252|gb|EAX60768.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae V52]
 gi|126510058|gb|EAZ72652.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae NCTC 8457]
 gi|126518684|gb|EAZ75907.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae B33]
 gi|227011512|gb|ACP07723.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae M66-2]
 gi|254845666|gb|EET24080.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae MO10]
 gi|297541575|gb|EFH77626.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae MAK 757]
          Length = 663

 Score =  210 bits (535), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 29  SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 88

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 89  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 208 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 259

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 320 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 380 IERVTRSSMEEIQLPH 395


>gi|223984537|ref|ZP_03634669.1| hypothetical protein HOLDEFILI_01964 [Holdemania filiformis DSM
           12042]
 gi|223963523|gb|EEF67903.1| hypothetical protein HOLDEFILI_01964 [Holdemania filiformis DSM
           12042]
          Length = 556

 Score =  210 bits (535), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 116/354 (32%), Positives = 198/354 (55%), Gaps = 16/354 (4%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ +   + + + + G+ + + IQ A  P V+NG D I QS++GTGK+  F +  +  L
Sbjct: 4   NELNLSPEMSRAIADCGYTEATYIQSACIPVVMNGGDVIGQSQTGTGKTAAFAIPIIEML 63

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQ 139
                ++PQ +IL+PTRE+A+Q+ D +R    + + +      GG Q+ +     K+   
Sbjct: 64  EVTDRKRPQALILSPTRELAMQVCDEIRKFTKYKEGIRTVAVYGGQQISKQILELKKGAD 123

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+   I+ + L  D  R+ ++DEAD+++N GF EDI  +   LP  +Q ++ S
Sbjct: 124 IVVGTPGRVLDHIRRRTLRFDQCRVLVLDEADEMLNMGFREDIETVIEALPQQRQTVLFS 183

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK--LV 257
           AT     L    +Y  +P+ I+          ++Q+  + P+          E KK  L+
Sbjct: 184 ATMPKPILEITSQYQTNPVHIKTPQTQINTPKIEQVYYVCPK----------EAKKEILM 233

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           QL+S    +  +IF N +   + +  +L +  + A  L G   Q+ R   +D+FK+GK+ 
Sbjct: 234 QLISMQNPHLAMIFCNTKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKIN 293

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           ILV TD+AARGID  ++D+V N ++P ++  Y+HR+GR GR G  GL +T+++A
Sbjct: 294 ILVATDVAARGIDVDSMDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITA 347


>gi|229514239|ref|ZP_04403700.1| cold-shock DEAD-box protein A [Vibrio cholerae TMA 21]
 gi|229522353|ref|ZP_04411769.1| cold-shock DEAD-box protein A [Vibrio cholerae TM 11079-80]
 gi|229528334|ref|ZP_04417725.1| cold-shock DEAD-box protein A [Vibrio cholerae 12129(1)]
 gi|229334696|gb|EEO00182.1| cold-shock DEAD-box protein A [Vibrio cholerae 12129(1)]
 gi|229340338|gb|EEO05344.1| cold-shock DEAD-box protein A [Vibrio cholerae TM 11079-80]
 gi|229348219|gb|EEO13177.1| cold-shock DEAD-box protein A [Vibrio cholerae TMA 21]
          Length = 653

 Score =  210 bits (535), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 203/376 (53%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 19  SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 78

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 79  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 137

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 138 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 197

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP  +    + + +  V+Q   ++        + V++++ + +L
Sbjct: 198 ATMPPMVKEIVERFLRDPECVDVAGSNQTVAKVEQQYWVV--------KGVEKDEAMARL 249

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 250 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 309

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 310 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 369

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 370 IERVTRSSMEEIQLPH 385


>gi|335428790|ref|ZP_08555700.1| putative ATP-dependent RNA helicase [Haloplasma contractile
           SSD-17B]
 gi|335430826|ref|ZP_08557712.1| putative ATP-dependent RNA helicase [Haloplasma contractile
           SSD-17B]
 gi|334887366|gb|EGM25698.1| putative ATP-dependent RNA helicase [Haloplasma contractile
           SSD-17B]
 gi|334891731|gb|EGM29977.1| putative ATP-dependent RNA helicase [Haloplasma contractile
           SSD-17B]
          Length = 528

 Score =  210 bits (535), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 129/377 (34%), Positives = 204/377 (54%), Gaps = 15/377 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ I   I+Q + E GFV+ +PIQ  A PY+L G D I Q+++GTGK+  F +  + KL
Sbjct: 6   NELEISDQIKQSIAEMGFVEPTPIQAEAIPYILEGNDIIGQAQTGTGKTAAFSIPLIEKL 65

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  +  Q IIL PTRE+A+Q+TD +R +  +V+ + V    GG     Q++  KR  Q
Sbjct: 66  -DLNNRSIQGIILCPTRELAIQVTDEIRKLTKYVEGVKVVPIYGGQSYNIQLKALKRKPQ 124

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+   I  K + ++++++ I+DEAD+++  GF ED+ +I  + P  +Q  + S
Sbjct: 125 IVVGTPGRVIDHINRKTVKLENIKMLILDEADEMLKMGFREDLEYILQKTPTERQTTLFS 184

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT          KY   P LI+ E  +  +  +KQ    +   +   L        LV+L
Sbjct: 185 ATMPKAIQDIANKYQKKPKLIQIERKSLTVDNIKQEYFELNNNQKFDL--------LVRL 236

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L    +   ++F N +   + +   L   N+  E L G   Q+ R   ++SF+   ++IL
Sbjct: 237 LDHNHYQSAIVFCNTKREVDELVVRLQEHNYMTEALHGDLKQQQRDRVMNSFRNKNIKIL 296

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARGID  NV+ V N +IP D   Y+HR+GR GR G  G   T ++ +   +  S
Sbjct: 297 VATDVAARGIDVNNVEAVFNYDIPLDDEAYVHRIGRTGRAGQSGASYTFINPKQFHRLKS 356

Query: 380 LMGEINLDHAFNVGLVP 396
           +  E  + H  + G +P
Sbjct: 357 I--ERYIKHKIDKGSIP 371


>gi|422920974|ref|ZP_16954232.1| cold-shock DEAD box protein A [Vibrio cholerae BJG-01]
 gi|341649769|gb|EGS73719.1| cold-shock DEAD box protein A [Vibrio cholerae BJG-01]
          Length = 643

 Score =  210 bits (534), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 203/376 (53%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP  +    + + +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMVKEIVERFLRDPECVDVAGSNQTVAKVEQQYWVV--------KGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|330822482|ref|XP_003291680.1| hypothetical protein DICPUDRAFT_156303 [Dictyostelium purpureum]
 gi|325078116|gb|EGC31785.1| hypothetical protein DICPUDRAFT_156303 [Dictyostelium purpureum]
          Length = 397

 Score =  210 bits (534), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 128/355 (36%), Positives = 199/355 (56%), Gaps = 20/355 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E+ +R G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F + AL 
Sbjct: 25  FESMGLGEELLR-GIYNYGFEKPSAIQQRAIVPIIKGRDTIAQAQSGTGKTATFSIGAL- 82

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRP 137
           + I + V+ PQ +IL+PTRE+A QI  V  ++  ++ N+ V   +GG      +++ +  
Sbjct: 83  QCIDVNVRSPQALILSPTRELAQQIQKVALALSEYM-NVQVHACVGGKNMSDDIKKLETG 141

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V IV G+PGR+  MI  K L+   +++ I+DEAD++++ GF + I  +Y  LP   Q+++
Sbjct: 142 VHIVSGTPGRVLDMITRKSLSTRHIKMMILDEADEMLSLGFQQQINDVYRYLPEATQIVL 201

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT + D +   +K+M  P+ I  +     L G+KQ    + +          EE K  
Sbjct: 202 VSATLTQDVVTMTEKFMSKPVRILLKRDELTLDGIKQFFVSVEK----------EEWKFG 251

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  +       Q VIF N + + + + E +  ANF    + G   QK R   + SF+ G
Sbjct: 252 TLCDIYDSLTITQAVIFCNTKKKVDQLTEKMREANFTVASMHGDMVQKEREEIIKSFRSG 311

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           + R+L+TTD+ ARGID   V LVIN ++P D   YLHR+GR+GR+G +G+ I  V
Sbjct: 312 ENRVLITTDILARGIDVQQVSLVINYDLPIDRENYLHRIGRSGRFGRKGVAINFV 366


>gi|325188273|emb|CCA22813.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 465

 Score =  210 bits (534), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 126/368 (34%), Positives = 208/368 (56%), Gaps = 21/368 (5%)

Query: 12  KDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           KD+ SN D + +  + + + + + +G+   GF K S IQ  A   +L G+D I Q++SGT
Sbjct: 81  KDIESNWDEVIDTFDAMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGT 140

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F V+ L K I + +++ Q +ILAPTRE+A QI  V+ ++G ++ +++V   +GGT
Sbjct: 141 GKTATFTVSILQK-ININLKETQALILAPTRELAQQIVKVIAAIGDYM-SINVHACVGGT 198

Query: 130 QVERP----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            V       ++ V IVVG+PGR+  MI    L  ++V++F++DEAD++++ GF + I  +
Sbjct: 199 AVRDDIHTLQQGVHIVVGTPGRVGDMINQGALRTEAVKMFVLDEADEMLSRGFQDQIYDV 258

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           +  LP   Q+ + SAT   + L   QK+M DP+ I  +     L G+KQ    I      
Sbjct: 259 FRFLPESVQVALFSATMPQEVLEVTQKFMRDPIRIMVKRDELTLEGIKQFFVAIER---- 314

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
                 EE K   L  L       Q +I+ N + + + + E + + +F    + G  DQ+
Sbjct: 315 ------EEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMDQR 368

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R   +  F+ G  R+L+TTDL ARGID   V LV+N ++P +   Y+HR+GR+GR+G +
Sbjct: 369 QRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVVNYDLPLNRENYIHRIGRSGRFGRK 428

Query: 363 GLVITIVS 370
           G+ I  ++
Sbjct: 429 GVAINFLT 436


>gi|325188272|emb|CCA22812.1| predicted protein putative [Albugo laibachii Nc14]
          Length = 470

 Score =  210 bits (534), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 126/368 (34%), Positives = 208/368 (56%), Gaps = 21/368 (5%)

Query: 12  KDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           KD+ SN D + +  + + + + + +G+   GF K S IQ  A   +L G+D I Q++SGT
Sbjct: 86  KDIESNWDEVIDTFDAMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGT 145

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F V+ L K I + +++ Q +ILAPTRE+A QI  V+ ++G ++ +++V   +GGT
Sbjct: 146 GKTATFTVSILQK-ININLKETQALILAPTRELAQQIVKVIAAIGDYM-SINVHACVGGT 203

Query: 130 QVERP----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            V       ++ V IVVG+PGR+  MI    L  ++V++F++DEAD++++ GF + I  +
Sbjct: 204 AVRDDIHTLQQGVHIVVGTPGRVGDMINQGALRTEAVKMFVLDEADEMLSRGFQDQIYDV 263

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           +  LP   Q+ + SAT   + L   QK+M DP+ I  +     L G+KQ    I      
Sbjct: 264 FRFLPESVQVALFSATMPQEVLEVTQKFMRDPIRIMVKRDELTLEGIKQFFVAIER---- 319

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
                 EE K   L  L       Q +I+ N + + + + E + + +F    + G  DQ+
Sbjct: 320 ------EEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMDQR 373

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R   +  F+ G  R+L+TTDL ARGID   V LV+N ++P +   Y+HR+GR+GR+G +
Sbjct: 374 QRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVVNYDLPLNRENYIHRIGRSGRFGRK 433

Query: 363 GLVITIVS 370
           G+ I  ++
Sbjct: 434 GVAINFLT 441


>gi|255746441|ref|ZP_05420388.1| cold-shock DEAD-box protein A [Vibrio cholera CIRS 101]
 gi|262148974|ref|ZP_06028121.1| cold-shock DEAD-box protein A [Vibrio cholerae INDRE 91/1]
 gi|360037704|ref|YP_004939466.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae O1 str.
           2010EL-1786]
 gi|379744210|ref|YP_005335262.1| cold-shock DEAD-box protein A [Vibrio cholerae IEC224]
 gi|417811754|ref|ZP_12458415.1| cold-shock DEAD box protein A [Vibrio cholerae HC-49A2]
 gi|417816943|ref|ZP_12463573.1| cold-shock DEAD box protein A [Vibrio cholerae HCUF01]
 gi|418330362|ref|ZP_12941343.1| cold-shock DEAD box protein A [Vibrio cholerae HC-06A1]
 gi|418337842|ref|ZP_12946737.1| cold-shock DEAD box protein A [Vibrio cholerae HC-23A1]
 gi|418341896|ref|ZP_12948726.1| cold-shock DEAD box protein A [Vibrio cholerae HC-28A1]
 gi|418349516|ref|ZP_12954248.1| cold-shock DEAD box protein A [Vibrio cholerae HC-43A1]
 gi|418353968|ref|ZP_12956693.1| cold-shock DEAD box protein A [Vibrio cholerae HC-61A1]
 gi|419826238|ref|ZP_14349741.1| dbpA RNA binding domain protein [Vibrio cholerae CP1033(6)]
 gi|421317541|ref|ZP_15768111.1| cold-shock DEAD box protein A [Vibrio cholerae CP1032(5)]
 gi|421320180|ref|ZP_15770738.1| cold-shock DEAD box protein A [Vibrio cholerae CP1038(11)]
 gi|421324222|ref|ZP_15774749.1| cold-shock DEAD box protein A [Vibrio cholerae CP1041(14)]
 gi|421327193|ref|ZP_15777711.1| cold-shock DEAD box protein A [Vibrio cholerae CP1042(15)]
 gi|421332285|ref|ZP_15782764.1| cold-shock DEAD box protein A [Vibrio cholerae CP1046(19)]
 gi|421335923|ref|ZP_15786386.1| cold-shock DEAD box protein A [Vibrio cholerae CP1048(21)]
 gi|421339731|ref|ZP_15790165.1| cold-shock DEAD box protein A [Vibrio cholerae HC-20A2]
 gi|421346512|ref|ZP_15796896.1| cold-shock DEAD box protein A [Vibrio cholerae HC-46A1]
 gi|422889725|ref|ZP_16932194.1| cold-shock DEAD box protein A [Vibrio cholerae HC-40A1]
 gi|422898635|ref|ZP_16935924.1| cold-shock DEAD box protein A [Vibrio cholerae HC-48A1]
 gi|422904683|ref|ZP_16939575.1| cold-shock DEAD box protein A [Vibrio cholerae HC-70A1]
 gi|422915030|ref|ZP_16949479.1| cold-shock DEAD box protein A [Vibrio cholerae HFU-02]
 gi|422927691|ref|ZP_16960635.1| cold-shock DEAD box protein A [Vibrio cholerae HC-38A1]
 gi|423146762|ref|ZP_17134250.1| cold-shock DEAD box protein A [Vibrio cholerae HC-19A1]
 gi|423147752|ref|ZP_17135130.1| cold-shock DEAD box protein A [Vibrio cholerae HC-21A1]
 gi|423151539|ref|ZP_17138770.1| cold-shock DEAD box protein A [Vibrio cholerae HC-22A1]
 gi|423158165|ref|ZP_17145178.1| cold-shock DEAD box protein A [Vibrio cholerae HC-32A1]
 gi|423161967|ref|ZP_17148839.1| cold-shock DEAD box protein A [Vibrio cholerae HC-33A2]
 gi|423163057|ref|ZP_17149880.1| cold-shock DEAD box protein A [Vibrio cholerae HC-48B2]
 gi|423732922|ref|ZP_17706165.1| dbpA RNA binding domain protein [Vibrio cholerae HC-17A1]
 gi|423741886|ref|ZP_17710664.1| dbpA RNA binding domain protein [Vibrio cholerae HC-50A2]
 gi|423910317|ref|ZP_17728305.1| dbpA RNA binding domain protein [Vibrio cholerae HC-62A1]
 gi|423919387|ref|ZP_17729217.1| dbpA RNA binding domain protein [Vibrio cholerae HC-77A1]
 gi|424002001|ref|ZP_17745086.1| cold-shock DEAD box protein A [Vibrio cholerae HC-17A2]
 gi|424004242|ref|ZP_17747248.1| cold-shock DEAD box protein A [Vibrio cholerae HC-37A1]
 gi|424022173|ref|ZP_17761856.1| cold-shock DEAD box protein A [Vibrio cholerae HC-62B1]
 gi|424028957|ref|ZP_17768508.1| cold-shock DEAD box protein A [Vibrio cholerae HC-69A1]
 gi|424588443|ref|ZP_18027939.1| cold-shock DEAD box protein A [Vibrio cholerae CP1030(3)]
 gi|424593192|ref|ZP_18032551.1| cold-shock DEAD box protein A [Vibrio cholerae CP1040(13)]
 gi|424597121|ref|ZP_18036338.1| cold-shock DEAD box protein A [Vibrio Cholerae CP1044(17)]
 gi|424603945|ref|ZP_18042996.1| cold-shock DEAD box protein A [Vibrio cholerae CP1047(20)]
 gi|424604697|ref|ZP_18043684.1| cold-shock DEAD box protein A [Vibrio cholerae CP1050(23)]
 gi|424608524|ref|ZP_18047402.1| cold-shock DEAD box protein A [Vibrio cholerae HC-39A1]
 gi|424615297|ref|ZP_18054013.1| cold-shock DEAD box protein A [Vibrio cholerae HC-41A1]
 gi|424619146|ref|ZP_18057751.1| cold-shock DEAD box protein A [Vibrio cholerae HC-42A1]
 gi|424620063|ref|ZP_18058611.1| cold-shock DEAD box protein A [Vibrio cholerae HC-47A1]
 gi|424642688|ref|ZP_18080466.1| cold-shock DEAD box protein A [Vibrio cholerae HC-56A2]
 gi|424650804|ref|ZP_18088350.1| cold-shock DEAD box protein A [Vibrio cholerae HC-57A2]
 gi|424654585|ref|ZP_18091903.1| cold-shock DEAD box protein A [Vibrio cholerae HC-81A2]
 gi|440711549|ref|ZP_20892190.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae 4260B]
 gi|443505549|ref|ZP_21072438.1| cold-shock DEAD box protein A [Vibrio cholerae HC-64A1]
 gi|443509457|ref|ZP_21076152.1| cold-shock DEAD box protein A [Vibrio cholerae HC-65A1]
 gi|443513286|ref|ZP_21079856.1| cold-shock DEAD box protein A [Vibrio cholerae HC-67A1]
 gi|443517121|ref|ZP_21083566.1| cold-shock DEAD box protein A [Vibrio cholerae HC-68A1]
 gi|443520773|ref|ZP_21087105.1| cold-shock DEAD box protein A [Vibrio cholerae HC-71A1]
 gi|443521684|ref|ZP_21087960.1| cold-shock DEAD box protein A [Vibrio cholerae HC-72A2]
 gi|443529708|ref|ZP_21095725.1| cold-shock DEAD box protein A [Vibrio cholerae HC-7A1]
 gi|443533398|ref|ZP_21099344.1| cold-shock DEAD box protein A [Vibrio cholerae HC-80A1]
 gi|443537075|ref|ZP_21102933.1| cold-shock DEAD box protein A [Vibrio cholerae HC-81A1]
 gi|449057861|ref|ZP_21736157.1| Cold-shock DEAD-box protein A [Vibrio cholerae O1 str. Inaba G4222]
 gi|255736195|gb|EET91593.1| cold-shock DEAD-box protein A [Vibrio cholera CIRS 101]
 gi|262031252|gb|EEY49869.1| cold-shock DEAD-box protein A [Vibrio cholerae INDRE 91/1]
 gi|340040093|gb|EGR01066.1| cold-shock DEAD box protein A [Vibrio cholerae HCUF01]
 gi|340044574|gb|EGR05522.1| cold-shock DEAD box protein A [Vibrio cholerae HC-49A2]
 gi|341627743|gb|EGS53041.1| cold-shock DEAD box protein A [Vibrio cholerae HC-70A1]
 gi|341629303|gb|EGS54468.1| cold-shock DEAD box protein A [Vibrio cholerae HC-48A1]
 gi|341629533|gb|EGS54685.1| cold-shock DEAD box protein A [Vibrio cholerae HC-40A1]
 gi|341632554|gb|EGS57419.1| cold-shock DEAD box protein A [Vibrio cholerae HFU-02]
 gi|341643170|gb|EGS67467.1| cold-shock DEAD box protein A [Vibrio cholerae HC-38A1]
 gi|356417845|gb|EHH71456.1| cold-shock DEAD box protein A [Vibrio cholerae HC-19A1]
 gi|356424073|gb|EHH77493.1| cold-shock DEAD box protein A [Vibrio cholerae HC-06A1]
 gi|356424755|gb|EHH78152.1| cold-shock DEAD box protein A [Vibrio cholerae HC-21A1]
 gi|356431226|gb|EHH84431.1| cold-shock DEAD box protein A [Vibrio cholerae HC-23A1]
 gi|356435650|gb|EHH88800.1| cold-shock DEAD box protein A [Vibrio cholerae HC-32A1]
 gi|356436734|gb|EHH89844.1| cold-shock DEAD box protein A [Vibrio cholerae HC-22A1]
 gi|356439786|gb|EHH92749.1| cold-shock DEAD box protein A [Vibrio cholerae HC-28A1]
 gi|356440797|gb|EHH93729.1| cold-shock DEAD box protein A [Vibrio cholerae HC-33A2]
 gi|356446378|gb|EHH99178.1| cold-shock DEAD box protein A [Vibrio cholerae HC-43A1]
 gi|356455033|gb|EHI07680.1| cold-shock DEAD box protein A [Vibrio cholerae HC-61A1]
 gi|356457236|gb|EHI09803.1| cold-shock DEAD box protein A [Vibrio cholerae HC-48B2]
 gi|356648858|gb|AET28912.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae O1 str.
           2010EL-1786]
 gi|378796804|gb|AFC60274.1| cold-shock DEAD-box protein A [Vibrio cholerae IEC224]
 gi|395919999|gb|EJH30822.1| cold-shock DEAD box protein A [Vibrio cholerae CP1032(5)]
 gi|395922236|gb|EJH33055.1| cold-shock DEAD box protein A [Vibrio cholerae CP1041(14)]
 gi|395925068|gb|EJH35870.1| cold-shock DEAD box protein A [Vibrio cholerae CP1038(11)]
 gi|395931083|gb|EJH41829.1| cold-shock DEAD box protein A [Vibrio cholerae CP1046(19)]
 gi|395934118|gb|EJH44857.1| cold-shock DEAD box protein A [Vibrio cholerae CP1042(15)]
 gi|395935605|gb|EJH46340.1| cold-shock DEAD box protein A [Vibrio cholerae CP1048(21)]
 gi|395941290|gb|EJH51968.1| cold-shock DEAD box protein A [Vibrio cholerae HC-20A2]
 gi|395948039|gb|EJH58694.1| cold-shock DEAD box protein A [Vibrio cholerae HC-46A1]
 gi|395955100|gb|EJH65704.1| cold-shock DEAD box protein A [Vibrio cholerae HC-42A1]
 gi|395966596|gb|EJH76713.1| cold-shock DEAD box protein A [Vibrio cholerae HC-57A2]
 gi|395967297|gb|EJH77393.1| cold-shock DEAD box protein A [Vibrio cholerae HC-56A2]
 gi|395968492|gb|EJH78444.1| cold-shock DEAD box protein A [Vibrio cholerae CP1030(3)]
 gi|395969359|gb|EJH79241.1| cold-shock DEAD box protein A [Vibrio cholerae CP1047(20)]
 gi|395978783|gb|EJH88152.1| cold-shock DEAD box protein A [Vibrio cholerae HC-47A1]
 gi|408006419|gb|EKG44567.1| cold-shock DEAD box protein A [Vibrio cholerae HC-41A1]
 gi|408012419|gb|EKG50198.1| cold-shock DEAD box protein A [Vibrio cholerae HC-39A1]
 gi|408039736|gb|EKG76005.1| cold-shock DEAD box protein A [Vibrio cholerae CP1040(13)]
 gi|408046854|gb|EKG82518.1| cold-shock DEAD box protein A [Vibrio Cholerae CP1044(17)]
 gi|408048545|gb|EKG83951.1| cold-shock DEAD box protein A [Vibrio cholerae CP1050(23)]
 gi|408059272|gb|EKG94040.1| cold-shock DEAD box protein A [Vibrio cholerae HC-81A2]
 gi|408609028|gb|EKK82411.1| dbpA RNA binding domain protein [Vibrio cholerae CP1033(6)]
 gi|408616441|gb|EKK89595.1| dbpA RNA binding domain protein [Vibrio cholerae HC-17A1]
 gi|408646650|gb|EKL18233.1| dbpA RNA binding domain protein [Vibrio cholerae HC-50A2]
 gi|408649426|gb|EKL20739.1| dbpA RNA binding domain protein [Vibrio cholerae HC-62A1]
 gi|408661260|gb|EKL32245.1| dbpA RNA binding domain protein [Vibrio cholerae HC-77A1]
 gi|408847857|gb|EKL87915.1| cold-shock DEAD box protein A [Vibrio cholerae HC-17A2]
 gi|408850986|gb|EKL90926.1| cold-shock DEAD box protein A [Vibrio cholerae HC-37A1]
 gi|408872348|gb|EKM11568.1| cold-shock DEAD box protein A [Vibrio cholerae HC-69A1]
 gi|408876938|gb|EKM16042.1| cold-shock DEAD box protein A [Vibrio cholerae HC-62B1]
 gi|439973036|gb|ELP49279.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae 4260B]
 gi|443429993|gb|ELS72614.1| cold-shock DEAD box protein A [Vibrio cholerae HC-64A1]
 gi|443433860|gb|ELS80072.1| cold-shock DEAD box protein A [Vibrio cholerae HC-65A1]
 gi|443437457|gb|ELS87240.1| cold-shock DEAD box protein A [Vibrio cholerae HC-67A1]
 gi|443441280|gb|ELS94648.1| cold-shock DEAD box protein A [Vibrio cholerae HC-68A1]
 gi|443445532|gb|ELT02252.1| cold-shock DEAD box protein A [Vibrio cholerae HC-71A1]
 gi|443452146|gb|ELT12374.1| cold-shock DEAD box protein A [Vibrio cholerae HC-72A2]
 gi|443459278|gb|ELT26672.1| cold-shock DEAD box protein A [Vibrio cholerae HC-7A1]
 gi|443463363|gb|ELT34368.1| cold-shock DEAD box protein A [Vibrio cholerae HC-80A1]
 gi|443467084|gb|ELT41740.1| cold-shock DEAD box protein A [Vibrio cholerae HC-81A1]
 gi|448262884|gb|EMB00131.1| Cold-shock DEAD-box protein A [Vibrio cholerae O1 str. Inaba G4222]
          Length = 643

 Score =  210 bits (534), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|11602713|emb|CAC18543.1| translation initiation factor 4A-like protein [Echinococcus
           multilocularis]
          Length = 403

 Score =  210 bits (534), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 125/366 (34%), Positives = 202/366 (55%), Gaps = 20/366 (5%)

Query: 17  NIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           ++DVL   D + + + + +G+   GF + S IQ  A   ++ G D I Q++SGTGK+   
Sbjct: 25  DVDVLPTFDSMNLREDLLRGIYAYGFERPSAIQQRAIKQIILGRDVIAQAQSGTGKTATL 84

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK 135
            +A+L +++ + ++  Q +IL+PTRE+A+QI  V+  +G  + N+      GGT V    
Sbjct: 85  AIASL-QVLDIQLRDTQVLILSPTRELALQIQKVILVLGDFM-NVQCHACYGGTNVGEDI 142

Query: 136 RPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           + +     IV G+PGR+  MIK + L   +++L I+DEAD++++ GF E I  +Y  LPP
Sbjct: 143 KKLDYGQHIVSGTPGRVFDMIKRRNLRTRTIKLLILDEADEMLDKGFKEQIYDVYRYLPP 202

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
             Q++++SAT  HD L    K+M DP+ I  +     L G+KQ    +            
Sbjct: 203 GTQVVLLSATMPHDILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVER---------- 252

Query: 252 EEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           EE K   L  L       Q VIF N + + E + + +  +NF    + G   QK R   +
Sbjct: 253 EEWKFETLCDLYDTLTVTQSVIFCNTRRKAEWLADKMCKSNFTVTVMHGDMVQKEREEIM 312

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
            +F+  + R+L+TTDL ARGID   V +VIN  +P++   Y+HR+GR+GR+G +G+ I  
Sbjct: 313 RNFRSSESRVLITTDLLARGIDVQQVSMVINYGLPNNRELYIHRIGRSGRFGRKGVAINF 372

Query: 369 VSAESL 374
           V  E +
Sbjct: 373 VKNEDI 378


>gi|147671700|ref|YP_001215271.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae O395]
 gi|153216449|ref|ZP_01950468.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae 1587]
 gi|153802978|ref|ZP_01957564.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae MZO-3]
 gi|153830498|ref|ZP_01983165.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae 623-39]
 gi|227120002|ref|YP_002821897.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae O395]
 gi|254292037|ref|ZP_04962815.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae AM-19226]
 gi|297580174|ref|ZP_06942101.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae RC385]
 gi|124114251|gb|EAY33071.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae 1587]
 gi|124121501|gb|EAY40244.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae MZO-3]
 gi|146314083|gb|ABQ18623.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae O395]
 gi|148874031|gb|EDL72166.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae 623-39]
 gi|150422062|gb|EDN14031.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae AM-19226]
 gi|227015452|gb|ACP11661.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae O395]
 gi|297535820|gb|EFH74654.1| ATP-dependent RNA helicase DeaD [Vibrio cholerae RC385]
          Length = 663

 Score =  210 bits (534), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 203/376 (53%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 29  SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 88

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 89  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP  +    + + +  V+Q   ++        + V++++ + +L
Sbjct: 208 ATMPPMVKEIVERFLRDPECVDVAGSNQTVAKVEQQYWVV--------KGVEKDEAMARL 259

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 260 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 319

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 320 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 379

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 380 IERVTRSSMEEIQLPH 395


>gi|424513236|emb|CCO66820.1| predicted protein [Bathycoccus prasinos]
          Length = 402

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 126/352 (35%), Positives = 195/352 (55%), Gaps = 19/352 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +GL   GF K S IQ  A   + +G D I Q++SGTGK+   +  +L +++ + 
Sbjct: 36  IREDLLRGLYAYGFEKPSAIQQRAVLPITSGRDVIAQAQSGTGKT-SMISLSLCQMVDIT 94

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q ++L+PTRE+AVQ      ++G ++ N+ V   IGG  +    R     V IV G
Sbjct: 95  QREVQALVLSPTRELAVQTEKTALALGNYM-NVQVHACIGGRSIGEDIRKLDYGVHIVSG 153

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++  I+DEAD+++N GF E I  IY  LPP  Q++++SAT  
Sbjct: 154 TPGRVFDMIKRRNLRTKNIKTLILDEADEMLNKGFKEQIYDIYRYLPPETQVVLISATLP 213

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 214 NEVLDMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 263

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +   NF    + G   QK R A +  F+ G  R+L+
Sbjct: 264 DTLTITQAVIFVNTKKKVDWLTEKMRKNNFTVSSMHGDMPQKEREAIMAEFRGGTTRVLI 323

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GRYG +G+ IT + AE
Sbjct: 324 TTDVWARGIDVQQVSLVINYDLPNNRENYIHRIGRSGRYGRKGVAITFLKAE 375


>gi|114775697|ref|ZP_01451265.1| DEAD/DEAH box helicase-like protein [Mariprofundus ferrooxydans
           PV-1]
 gi|114553808|gb|EAU56189.1| DEAD/DEAH box helicase-like protein [Mariprofundus ferrooxydans
           PV-1]
          Length = 628

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 119/371 (32%), Positives = 205/371 (55%), Gaps = 14/371 (3%)

Query: 19  DVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVA 78
           DVLF N++ + +P+ + +++ G+   +PIQ A  P +L G D + Q+++GTGK+  F + 
Sbjct: 4   DVLF-NELGLSEPVLKSIKDQGYENATPIQAATIPLLLEGRDVLGQAQTGTGKTAAFALP 62

Query: 79  ALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERP 134
            L+ +I +  + PQ ++LAPTRE+A+Q+ +  +    H+K  HV    GG     Q+ + 
Sbjct: 63  LLS-MIDIDQRDPQVLVLAPTRELAIQVAEAFQQYAHHIKGFHVLPIYGGQSYDIQLRQL 121

Query: 135 KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
           KR   +VVG+PGR+   I+ K LN+  ++  ++DEAD+++  GF++D+ W+  QLP  +Q
Sbjct: 122 KRGAHVVVGTPGRVMDHIRRKTLNLSGLKTLVLDEADEMLRMGFIDDVKWVLEQLPEQRQ 181

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
           + + SAT         Q ++ +P  +  +D T     ++Q   ++      S R  ++  
Sbjct: 182 IALFSATMPAVIRKIAQSHLKNPQHVTIKDKTTTAPTIRQRFWMV------SGR--NKID 233

Query: 255 KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L ++L   PF+  +IF   +   + + E L    + A  L+G   Q  R   ++  K G
Sbjct: 234 ALTRILEFEPFDGMIIFVRTKTATDEVAERLEARGYAASALNGDVKQSQREQIVNRLKSG 293

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           K+ I+V TD+AARG+D   +  VIN +IPHD  +Y+HR+GR GR G +G  I  V+    
Sbjct: 294 KIDIVVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRKGDAILFVAPREK 353

Query: 375 VKFHSLMGEIN 385
              +S+    N
Sbjct: 354 RMLYSIEKATN 364


>gi|115438787|ref|NP_001043673.1| Os01g0639100 [Oryza sativa Japonica Group]
 gi|75321708|sp|Q5VNM3.1|RH2_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 2
 gi|55297015|dbj|BAD68586.1| putative nicotiana eukaryotic translation initiation factor 4A
           [Oryza sativa Japonica Group]
 gi|55297606|dbj|BAD68952.1| putative nicotiana eukaryotic translation initiation factor 4A
           [Oryza sativa Japonica Group]
 gi|113533204|dbj|BAF05587.1| Os01g0639100 [Oryza sativa Japonica Group]
 gi|215707106|dbj|BAG93566.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222618929|gb|EEE55061.1| hypothetical protein OsJ_02769 [Oryza sativa Japonica Group]
          Length = 404

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 125/369 (33%), Positives = 203/369 (55%), Gaps = 24/369 (6%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+S+ D +   D L+     +G+   GF K S IQ  A   +++G D I Q++SGTGK+
Sbjct: 28  EVISSFDQMGIRDDLL-----RGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKT 82

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE 132
            + +  ++ +++   V++ Q +IL+PTRE+A Q   V+ ++G  + N+ V   IGG  + 
Sbjct: 83  SM-ISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFI-NIQVHACIGGKSIG 140

Query: 133 RPKRP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
              R     V +V G+PGR+  MIK + L   +++L I+DEAD+++  GF + I  +Y  
Sbjct: 141 EDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRY 200

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q+ ++SAT  H+ L    K+M DP+ I  +     L G+KQ    + +       
Sbjct: 201 LPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEK------- 253

Query: 249 YVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              EE K   L  L       Q VIF N + + + + E + + NF    + G   QK R 
Sbjct: 254 ---EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERD 310

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
           A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ 
Sbjct: 311 AIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 370

Query: 366 ITIVSAESL 374
           I  V  E +
Sbjct: 371 INFVKKEDI 379


>gi|385302570|gb|EIF46696.1| eukaryotic initiation factor 4a-12 [Dekkera bruxellensis AWRI1499]
          Length = 396

 Score =  209 bits (533), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 200/363 (55%), Gaps = 25/363 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +A L   I + 
Sbjct: 30  LKEDLLKGIYSYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIAMLQT-IDIN 88

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
            +  Q ++L+PTRE+A+QI DV++S+G ++ N+      GG  V    + +     IV G
Sbjct: 89  KKDTQALVLSPTRELAIQIQDVIKSLGDYM-NVKCHACTGGRAVGNDMKSLNKGQHIVSG 147

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI  + LN   +++ +MDEAD+L+  GF + I  IY  LPP  Q++VVSAT  
Sbjct: 148 TPGRVLDMINRRVLNTRHIKILVMDEADELLGKGFQDQIYEIYKFLPPGAQVVVVSATVP 207

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LV 257
           H  LA  +K+M +P+ I  +     L G+KQ              YV  EK+      L 
Sbjct: 208 HSVLAVTRKFMNNPVKILVKRDEITLEGIKQ-------------YYVQVEKEDWKFDTLC 254

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + +   + ++L NANF    + G   Q+ R   ++ F+ G  R
Sbjct: 255 DLYDSLTITQAVIFCNTKKKVNWLADSLKNANFSVVSMHGDMKQEERDKIMNEFRLGNSR 314

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G+ +  V+ + +   
Sbjct: 315 VLISTDVWARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAVNFVTKDDVDTL 374

Query: 378 HSL 380
           H L
Sbjct: 375 HDL 377


>gi|357138280|ref|XP_003570724.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 34-like
           [Brachypodium distachyon]
          Length = 410

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 123/372 (33%), Positives = 208/372 (55%), Gaps = 20/372 (5%)

Query: 11  TKDVLSNIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           T +  + ++V+   D + I   + +G+   GF K S IQ  A   ++ G D I Q++SGT
Sbjct: 26  TFETSAGVEVVTSFDAMGIRDDLLRGIYGYGFDKPSAIQQRAVLPIITGRDVIAQAQSGT 85

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+ + +  ++ +++   V + Q +IL+PTRE+A Q   V+++VG ++ +++V   +GG 
Sbjct: 86  GKTSM-ISLSVCQIVDTSVHEVQALILSPTRELATQTEKVMQAVGNYM-SVNVHACVGGK 143

Query: 130 QVERPKRP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +    R     VQ+V G+PGR+  MIK + L   +++L ++DEAD++++ GF + I  +
Sbjct: 144 SIGEDIRKLESGVQVVSGTPGRVCDMIKRRTLRTRAIKLLVLDEADEMLSRGFKDQIYDV 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           Y  LPP  Q++++SAT  HD L    K+M DP+ I  +     L G+KQ    + +    
Sbjct: 204 YRYLPPELQVVLISATLPHDILEITSKFMTDPVRILVKRDELTLEGIKQFFVAVEK---- 259

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
                 EE K   L  L       Q VIF N + + + + E +   NF    + G   QK
Sbjct: 260 ------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRTNNFTVSAMHGDMPQK 313

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R A ++ F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +
Sbjct: 314 ERDAIMNEFRGGSTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRK 373

Query: 363 GLVITIVSAESL 374
           G+ I  V  + +
Sbjct: 374 GVAINFVRKDDI 385


>gi|390566282|ref|ZP_10246715.1| DEAD-box ATP-dependent RNA helicase cshA [Nitrolancetus hollandicus
           Lb]
 gi|390170465|emb|CCF86060.1| DEAD-box ATP-dependent RNA helicase cshA [Nitrolancetus hollandicus
           Lb]
          Length = 528

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 119/350 (34%), Positives = 200/350 (57%), Gaps = 20/350 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +PI + ++  GF + +PIQ  A P +L+G D I Q+++GTGK+  F +  + +L K  
Sbjct: 9   LSEPILRAIEAVGFEEPTPIQRQAIPLMLDGRDVIAQAQTGTGKTAAFALPIIQRL-KPD 67

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR----PVQIVVG 143
            + PQ ++LAPTRE+AVQ+     S+G   +++ V    GG  +ER  R    PV I+VG
Sbjct: 68  QKGPQALVLAPTRELAVQVAQAFYSLGK-FQDIRVLAVYGGQPIERQLRALRFPVDIIVG 126

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGRI   ++ + L+ + + + ++DEAD++++ GFVEDI WI  Q+P  +Q+ + SAT  
Sbjct: 127 TPGRIMDHLRRETLSFEDISMVVLDEADEMLDMGFVEDIEWILDQVPAQRQIALFSATIP 186

Query: 204 HDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLV-ALIPECKNPSLRYVDEEKKLVQLL 260
           +  +   ++Y+  P  + I PE  T PL   +Q+   ++P  K          + L ++L
Sbjct: 187 NRIVDLSRRYLQKPVRIAIEPERVTVPL--TEQVYYQVVPRAK---------VEALTRIL 235

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
             T  +  +IF   +   + + + L +  + AE L G   Q  R   +  F+ G+  +L+
Sbjct: 236 DLTAPSSAIIFCRTKREVDDLTQKLESLGYPAEALHGDLSQVQRDRVMGRFRSGQTELLI 295

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            TD+A+RG+D   V  VIN +IP D  +Y+HR+GR GR G  G+ IT+V+
Sbjct: 296 ATDVASRGLDIEQVSHVINYDIPLDPESYVHRIGRTGRAGRPGVAITLVT 345


>gi|153827325|ref|ZP_01979992.1| cold-shock deAd box protein a [Vibrio cholerae MZO-2]
 gi|262169080|ref|ZP_06036773.1| cold-shock DEAD-box protein A [Vibrio cholerae RC27]
 gi|262190964|ref|ZP_06049177.1| cold-shock DEAD-box protein A [Vibrio cholerae CT 5369-93]
 gi|417823279|ref|ZP_12469877.1| cold-shock DEAD box protein A [Vibrio cholerae HE48]
 gi|419828553|ref|ZP_14352044.1| dbpA RNA binding domain protein [Vibrio cholerae HC-1A2]
 gi|419833476|ref|ZP_14356937.1| dbpA RNA binding domain protein [Vibrio cholerae HC-61A2]
 gi|419836530|ref|ZP_14359970.1| cold-shock DEAD box protein A [Vibrio cholerae HC-46B1]
 gi|421343387|ref|ZP_15793791.1| cold-shock DEAD box protein A [Vibrio cholerae HC-43B1]
 gi|421349335|ref|ZP_15799704.1| cold-shock DEAD box protein A [Vibrio cholerae HE-25]
 gi|421355787|ref|ZP_15806118.1| cold-shock DEAD box protein A [Vibrio cholerae HE-45]
 gi|422920214|ref|ZP_16953544.1| cold-shock DEAD box protein A [Vibrio cholerae HC-02A1]
 gi|423734953|ref|ZP_17708164.1| dbpA RNA binding domain protein [Vibrio cholerae HC-41B1]
 gi|423810534|ref|ZP_17714585.1| dbpA RNA binding domain protein [Vibrio cholerae HC-55C2]
 gi|423844428|ref|ZP_17718319.1| dbpA RNA binding domain protein [Vibrio cholerae HC-59A1]
 gi|423875352|ref|ZP_17721990.1| dbpA RNA binding domain protein [Vibrio cholerae HC-60A1]
 gi|423999832|ref|ZP_17742995.1| cold-shock DEAD box protein A [Vibrio cholerae HC-02C1]
 gi|424009340|ref|ZP_17752280.1| cold-shock DEAD box protein A [Vibrio cholerae HC-44C1]
 gi|424011664|ref|ZP_17754509.1| cold-shock DEAD box protein A [Vibrio cholerae HC-55B2]
 gi|424021492|ref|ZP_17761245.1| cold-shock DEAD box protein A [Vibrio cholerae HC-59B1]
 gi|424589187|ref|ZP_18028652.1| cold-shock DEAD box protein A [Vibrio cholerae CP1037(10)]
 gi|424626901|ref|ZP_18065322.1| cold-shock DEAD box protein A [Vibrio cholerae HC-50A1]
 gi|424627793|ref|ZP_18066126.1| cold-shock DEAD box protein A [Vibrio cholerae HC-51A1]
 gi|424631593|ref|ZP_18069786.1| cold-shock DEAD box protein A [Vibrio cholerae HC-52A1]
 gi|424638508|ref|ZP_18076475.1| cold-shock DEAD box protein A [Vibrio cholerae HC-55A1]
 gi|424642312|ref|ZP_18080154.1| cold-shock DEAD box protein A [Vibrio cholerae HC-56A1]
 gi|424646919|ref|ZP_18084618.1| cold-shock DEAD box protein A [Vibrio cholerae HC-57A1]
 gi|429885422|ref|ZP_19367011.1| Cold-shock DEAD-box protein A [Vibrio cholerae PS15]
 gi|443525638|ref|ZP_21091795.1| cold-shock DEAD box protein A [Vibrio cholerae HC-78A1]
 gi|149738767|gb|EDM53109.1| cold-shock deAd box protein a [Vibrio cholerae MZO-2]
 gi|262022361|gb|EEY41069.1| cold-shock DEAD-box protein A [Vibrio cholerae RC27]
 gi|262033168|gb|EEY51693.1| cold-shock DEAD-box protein A [Vibrio cholerae CT 5369-93]
 gi|340049409|gb|EGR10325.1| cold-shock DEAD box protein A [Vibrio cholerae HE48]
 gi|341631628|gb|EGS56512.1| cold-shock DEAD box protein A [Vibrio cholerae HC-02A1]
 gi|395941954|gb|EJH52631.1| cold-shock DEAD box protein A [Vibrio cholerae HC-43B1]
 gi|395950457|gb|EJH61076.1| cold-shock DEAD box protein A [Vibrio cholerae HE-45]
 gi|395955952|gb|EJH66546.1| cold-shock DEAD box protein A [Vibrio cholerae HE-25]
 gi|408007902|gb|EKG45938.1| cold-shock DEAD box protein A [Vibrio cholerae HC-50A1]
 gi|408018750|gb|EKG56181.1| cold-shock DEAD box protein A [Vibrio cholerae HC-55A1]
 gi|408019565|gb|EKG56962.1| cold-shock DEAD box protein A [Vibrio cholerae HC-56A1]
 gi|408026495|gb|EKG63501.1| cold-shock DEAD box protein A [Vibrio cholerae HC-52A1]
 gi|408038183|gb|EKG74537.1| cold-shock DEAD box protein A [Vibrio cholerae CP1037(10)]
 gi|408039214|gb|EKG75506.1| cold-shock DEAD box protein A [Vibrio cholerae HC-57A1]
 gi|408060259|gb|EKG94961.1| cold-shock DEAD box protein A [Vibrio cholerae HC-51A1]
 gi|408623626|gb|EKK96580.1| dbpA RNA binding domain protein [Vibrio cholerae HC-1A2]
 gi|408630406|gb|EKL03003.1| dbpA RNA binding domain protein [Vibrio cholerae HC-41B1]
 gi|408637667|gb|EKL09695.1| dbpA RNA binding domain protein [Vibrio cholerae HC-55C2]
 gi|408645684|gb|EKL17323.1| dbpA RNA binding domain protein [Vibrio cholerae HC-60A1]
 gi|408646732|gb|EKL18314.1| dbpA RNA binding domain protein [Vibrio cholerae HC-59A1]
 gi|408650800|gb|EKL22075.1| dbpA RNA binding domain protein [Vibrio cholerae HC-61A2]
 gi|408843932|gb|EKL84071.1| cold-shock DEAD box protein A [Vibrio cholerae HC-02C1]
 gi|408857080|gb|EKL96768.1| cold-shock DEAD box protein A [Vibrio cholerae HC-46B1]
 gi|408862444|gb|EKM01960.1| cold-shock DEAD box protein A [Vibrio cholerae HC-59B1]
 gi|408864364|gb|EKM03807.1| cold-shock DEAD box protein A [Vibrio cholerae HC-44C1]
 gi|408867368|gb|EKM06729.1| cold-shock DEAD box protein A [Vibrio cholerae HC-55B2]
 gi|429227775|gb|EKY33757.1| Cold-shock DEAD-box protein A [Vibrio cholerae PS15]
 gi|443455970|gb|ELT19680.1| cold-shock DEAD box protein A [Vibrio cholerae HC-78A1]
          Length = 643

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 203/376 (53%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP  +    + + +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMVKEIVERFLRDPECVDVAGSNQTVAKVEQQYWVV--------KGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|346320101|gb|EGX89702.1| eukaryotic initiation factor 4A-12 [Cordyceps militaris CM01]
          Length = 385

 Score =  209 bits (533), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 201/363 (55%), Gaps = 26/363 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 30  FESMSLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 87

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT V    R +   
Sbjct: 88  QVIDTAVRESQALVLSPTRELATQIQSVIMALGDYM-NVQCHACIGGTNVGEDIRKLDYG 146

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 147 QHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRHLPPATQVVV 206

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ              ++  EK+  
Sbjct: 207 VSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQY-------------FIAVEKEDW 253

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  L       Q VIF N + + + + + +  ANF    + G   QK R + +  F
Sbjct: 254 KFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDF 313

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           ++G  R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ 
Sbjct: 314 RQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTT 373

Query: 372 ESL 374
           + +
Sbjct: 374 DDV 376


>gi|417819858|ref|ZP_12466473.1| cold-shock DEAD box protein A [Vibrio cholerae HE39]
 gi|423941342|ref|ZP_17732907.1| dbpA RNA binding domain protein [Vibrio cholerae HE-40]
 gi|423973094|ref|ZP_17736452.1| dbpA RNA binding domain protein [Vibrio cholerae HE-46]
 gi|340040716|gb|EGR01688.1| cold-shock DEAD box protein A [Vibrio cholerae HE39]
 gi|408662755|gb|EKL33661.1| dbpA RNA binding domain protein [Vibrio cholerae HE-40]
 gi|408666696|gb|EKL37474.1| dbpA RNA binding domain protein [Vibrio cholerae HE-46]
          Length = 643

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 203/376 (53%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP  +    + + +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMVKEIVERFLRDPECVDVAGSNQTVAKVEQQYWVV--------KGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|401404591|ref|XP_003881760.1| putative ATP-dependent helicase, putaive [Neospora caninum
           Liverpool]
 gi|325116173|emb|CBZ51727.1| putative ATP-dependent helicase, putaive [Neospora caninum
           Liverpool]
          Length = 395

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 125/366 (34%), Positives = 197/366 (53%), Gaps = 20/366 (5%)

Query: 14  VLSNIDVL-FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           VL   D + F+ D+L      +G+   GF + S +Q  A   ++ G D IVQS+SGTGK+
Sbjct: 20  VLPTFDSMGFKEDLL------RGIYAYGFERPSAVQQRAIVPIMKGRDVIVQSQSGTGKT 73

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE 132
            VF +  L + I   V+ PQ +IL+PTRE+A Q   V  ++G ++ ++ V   IGG +V 
Sbjct: 74  CVFCLGCL-QCIDPKVRDPQALILSPTRELAEQSQKVCLALGDYM-SVQVHCCIGGKRVG 131

Query: 133 RPKRP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
              R     V IV G+PGR+  MI  ++ +   ++L ++DEAD+++N GF E +  IY  
Sbjct: 132 DDIRALEAGVHIVSGTPGRVFHMIAQRHFSTRHIKLLVLDEADEMLNRGFKEQVYDIYRY 191

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q+++VSAT  H+ L    K+M DP  +  +     L G+KQ    +        R
Sbjct: 192 LPPSTQVVLVSATLPHEVLEMTTKFMDDPFRVLVKRDELTLEGIKQFFVAVE-------R 244

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
              +   L  L       Q VIF N + + E + + +  ANF    + G   Q+ R   +
Sbjct: 245 EQWKFDTLTDLYDTLTITQAVIFCNTKAKVEWLAQKMKEANFTVSRMHGDMPQQERDEIM 304

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G+ R+L+ TD+  RG+D   V LVIN ++P+    Y+HR+GR+GR+G +G+ I  
Sbjct: 305 RQFRGGQSRVLIATDVWGRGLDVQQVSLVINYDLPNSRELYIHRIGRSGRFGRKGVAINF 364

Query: 369 VSAESL 374
           V  + +
Sbjct: 365 VKNDDI 370


>gi|68474158|ref|XP_718788.1| hypothetical protein CaO19.6197 [Candida albicans SC5314]
 gi|68474329|ref|XP_718704.1| hypothetical protein CaO19.13577 [Candida albicans SC5314]
 gi|74656470|sp|Q5AAW3.1|DHH1_CANAL RecName: Full=ATP-dependent RNA helicase DHH1
 gi|46440487|gb|EAK99792.1| hypothetical protein CaO19.13577 [Candida albicans SC5314]
 gi|46440576|gb|EAK99880.1| hypothetical protein CaO19.6197 [Candida albicans SC5314]
          Length = 549

 Score =  209 bits (533), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 202/368 (54%), Gaps = 22/368 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKSFE-DFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  L +L+K  + + Q +IL PTRE+A+Q + VVR++G HV         GGT
Sbjct: 79  GKTASFIIPCL-QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGT-QCMVTTGGT 136

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV I+VG+PGR+  +   K +++    LF+MDEADK+++  F   I  I
Sbjct: 137 SLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               PP +Q L+ SAT+     + + K++  P  I   D    L G+ Q  A        
Sbjct: 197 LEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEINLMDELT-LKGISQFYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 248 ---FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQ 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIVS 370
           GL I ++S
Sbjct: 365 GLAINLMS 372


>gi|189207078|ref|XP_001939873.1| ATP-dependent RNA helicase fal1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|330936277|ref|XP_003305321.1| hypothetical protein PTT_18129 [Pyrenophora teres f. teres 0-1]
 gi|187975966|gb|EDU42592.1| ATP-dependent RNA helicase fal1 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|311317725|gb|EFQ86604.1| hypothetical protein PTT_18129 [Pyrenophora teres f. teres 0-1]
          Length = 399

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 129/385 (33%), Positives = 210/385 (54%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 27  FEAMHLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISIL- 84

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  V+  +G ++ N+     IGGT V    R +   
Sbjct: 85  QVIDTAVRETQALVLSPTRELATQIQSVIMGLGDYM-NVQCHACIGGTNVGEDIRKLDYG 143

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 144 QHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 203

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    I +          EE K  
Sbjct: 204 VSATLPYDVLEMTTKFMTDPVRILVKRDELTLEGLKQYFIAIEK----------EEWKFD 253

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   Q+ R + +  F++ 
Sbjct: 254 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQRERDSIMQDFRQA 313

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTQDDV 373

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 374 ----RILRDIELYYSTQIDEMPMNV 394


>gi|148643558|ref|YP_001274071.1| helicase [Methanobrevibacter smithii ATCC 35061]
 gi|222444945|ref|ZP_03607460.1| hypothetical protein METSMIALI_00561 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350482|ref|ZP_05975899.1| ATP-dependent RNA helicase DeaD [Methanobrevibacter smithii DSM
           2374]
 gi|148552575|gb|ABQ87703.1| helicase [Methanobrevibacter smithii ATCC 35061]
 gi|222434510|gb|EEE41675.1| DEAD/DEAH box helicase [Methanobrevibacter smithii DSM 2375]
 gi|288861264|gb|EFC93562.1| ATP-dependent RNA helicase DeaD [Methanobrevibacter smithii DSM
           2374]
          Length = 429

 Score =  209 bits (533), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 120/368 (32%), Positives = 197/368 (53%), Gaps = 18/368 (4%)

Query: 19  DVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVA 78
           D+ F+ D  I   I++ ++E GF + SPIQ    P  L G D I Q+++GTGK++ F V 
Sbjct: 3   DITFD-DFEILAEIKKSIKEMGFEEPSPIQELTIPEALKGIDIIGQAQTGTGKTLAFTVP 61

Query: 79  ALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR-- 136
            L K+  +P   PQ I+L PTRE+ +Q+   +  +G+H+K L +    GG  + R  R  
Sbjct: 62  LLQKIF-IPDNSPQAIVLCPTRELCIQVAGEIGKIGSHMKKLKILPVYGGQPIGRQIRVL 120

Query: 137 --PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
              V +V+G+PGR+   I+ K L++  +   ++DEAD++++ GF EDI  I    P  +Q
Sbjct: 121 NKGVHVVIGTPGRVLDHIERKTLDLKGISTVVLDEADEMLDMGFREDIEKILRHTPKQRQ 180

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
            L+ SAT   +     + Y   P            L V Q    +PE         +++K
Sbjct: 181 TLLFSATMPKEIKRITKFYQKKP----------KHLKVAQSQMTVPEITQYYFETKEKDK 230

Query: 255 --KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
              L +L+     N  ++F N + R + + +NL N  + AE + G  +QK+R   ++ F+
Sbjct: 231 LENLTRLIDVYDVNLGLVFCNTKKRVDWVAKNLRNRGYAAEGIHGDMNQKSRDKVMNKFR 290

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
            G + IL+ TD+AARGID  NV++V+N ++P +   Y+HR+GR GR G  G   T V+ +
Sbjct: 291 NGNIEILIATDVAARGIDVPNVEVVVNYDVPQNPEYYVHRIGRTGRAGNMGYAFTFVAGK 350

Query: 373 SLVKFHSL 380
            +    ++
Sbjct: 351 EIYSLRTI 358


>gi|241949195|ref|XP_002417320.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
 gi|223640658|emb|CAX44953.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
          Length = 543

 Score =  209 bits (532), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 202/368 (54%), Gaps = 22/368 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKSFE-DFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  L +L+K  + + Q +IL PTRE+A+Q + VVR++G HV         GGT
Sbjct: 79  GKTASFIIPCL-QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGT-QCMVTTGGT 136

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV I+VG+PGR+  +   K +++    LF+MDEADK+++  F   I  I
Sbjct: 137 SLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               PP +Q L+ SAT+     + + K++  P  I   D    L G+ Q  A        
Sbjct: 197 LEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEINLMDELT-LKGISQFYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 248 ---FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQ 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIVS 370
           GL I ++S
Sbjct: 365 GLAINLMS 372


>gi|255076319|ref|XP_002501834.1| predicted protein [Micromonas sp. RCC299]
 gi|226517098|gb|ACO63092.1| predicted protein [Micromonas sp. RCC299]
          Length = 355

 Score =  209 bits (532), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 125/365 (34%), Positives = 199/365 (54%), Gaps = 23/365 (6%)

Query: 29  EKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           ++ + +GL  +GF   SP+Q AA P    G D +VQ+KSGTGK++ F  A L + +    
Sbjct: 1   QEAVVRGLNLSGFTIPSPVQRAAIPLGRLGADLVVQAKSGTGKTVTFG-AILCERVDRSS 59

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVK--NLHVDYFIGGTQVERPKRPV----QIVV 142
             PQ ++LAPTRE+A+Q  D +  +   +    L V  F+GG  V   +  +    Q+ V
Sbjct: 60  AYPQALVLAPTREVALQSRDALAKLARALDPPALRVACFLGGLPVADDRAALASGCQLCV 119

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR++Q+++   +    +R  ++DEAD L+   F  D+ +++S LP  KQ++  SATY
Sbjct: 120 GTPGRVRQLLEEGSMAPGGIRTLVIDEADALVGGAFEHDVLFVHSMLPERKQVMAFSATY 179

Query: 203 SHDNLATLQKYMVDPLLIRP-EDATRPLLGVKQ--LVALIP--EC--KNPSLRYVDEEKK 255
               LA ++     P  +      T  L  V+Q  L+  +P  EC    PS   V     
Sbjct: 180 PSRTLARIETMTRSPQRVAMCSQNTAALRAVRQHYLLVDVPGGECGPNAPSDNRV----- 234

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
                +   F+Q V+F     R E +   L +  + A + +G   QK R+ ++D+ +R +
Sbjct: 235 ----FAAVAFHQAVVFCRSAGRGEALTRRLTSEGYPAVFTAGTLPQKKRMDAMDAMRRFR 290

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
            R+LV+TDL ARG+D   V+LV +L++P DA+TY HR+GR GR+GT GL +T+V+   L 
Sbjct: 291 ARVLVSTDLTARGVDLERVNLVTHLDVPRDASTYAHRVGRTGRFGTAGLSVTVVTTAELS 350

Query: 376 KFHSL 380
           +   L
Sbjct: 351 RLREL 355


>gi|367013342|ref|XP_003681171.1| hypothetical protein TDEL_0D03760 [Torulaspora delbrueckii]
 gi|359748831|emb|CCE91960.1| hypothetical protein TDEL_0D03760 [Torulaspora delbrueckii]
          Length = 398

 Score =  209 bits (532), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 128/377 (33%), Positives = 209/377 (55%), Gaps = 28/377 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L + I+L  +  Q 
Sbjct: 36  RGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGIL-QAIELKRKDLQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ-----IVVGSPGRI 148
           ++L+PTRE+A QI+ VV ++G ++ N+      GG  ++   + +Q     IV G+PGR+
Sbjct: 95  LVLSPTRELATQISQVVSNLGDYM-NVKTYAITGGKTLKDDIKKIQGSGCHIVSGTPGRV 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L   SV++ I+DEAD+L++   GF   I  I+++LPP  Q++VVSAT + D 
Sbjct: 154 LDMIKRQILKTRSVQMLILDEADELLSERLGFKNQIYDIFTKLPPACQVVVVSATMNKDI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K+M DP+ I  +     L G+KQ +             VD+E      L  L   
Sbjct: 214 LEITKKFMSDPVKILVKKDEISLEGIKQYMV-----------NVDKEDWKFDTLCDLYDS 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + + + ++ +NF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLAQKMSQSNFAVSSMHGDMKQEDRDRVMNDFRTGHSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+ ARGID   + LVIN +IP     Y+HR+GR+GR+G +G+ I  V+ + + K    + 
Sbjct: 323 DVWARGIDVQQISLVINYDIPEILENYIHRIGRSGRFGRKGVAINFVTRDDVSK----LK 378

Query: 383 EINLDHAFNVGLVPDNL 399
           EI   ++  +  +P NL
Sbjct: 379 EIEKFYSIKIKAMPANL 395


>gi|451854107|gb|EMD67400.1| hypothetical protein COCSADRAFT_81543 [Cochliobolus sativus ND90Pr]
 gi|452000022|gb|EMD92484.1| hypothetical protein COCHEDRAFT_1098647 [Cochliobolus
           heterostrophus C5]
          Length = 399

 Score =  209 bits (532), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 129/385 (33%), Positives = 210/385 (54%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 27  FEAMHLKENLLR-GIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISIL- 84

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I   V++ Q ++L+PTRE+A QI  V+  +G ++ N+     IGGT V    R +   
Sbjct: 85  QVIDTAVRETQALVLSPTRELATQIQQVIMGLGDYM-NVQCHACIGGTNVGEDIRKLDYG 143

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             +V G+PGR+  MI+ + L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 144 QHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVV 203

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  +D L    K+M DP+ I  +     L G+KQ    I +          EE K  
Sbjct: 204 VSATLPYDVLEMTTKFMTDPVRILVKRDELTLEGLKQYFIAIEK----------EEWKFD 253

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  ANF    + G   Q+ R + +  F++ 
Sbjct: 254 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQRERDSIMQDFRQA 313

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +
Sbjct: 314 NSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTQDDV 373

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 374 ----RILRDIELYYSTQIDEMPMNV 394


>gi|410722381|ref|ZP_11361682.1| DNA/RNA helicase, superfamily II [Methanobacterium sp. Maddingley
           MBC34]
 gi|410597125|gb|EKQ51762.1| DNA/RNA helicase, superfamily II [Methanobacterium sp. Maddingley
           MBC34]
          Length = 527

 Score =  209 bits (532), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 123/368 (33%), Positives = 206/368 (55%), Gaps = 21/368 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFE D+ + + +++ + + GF + +PIQ  A P +L+G D I Q+++GTGK+  F +  
Sbjct: 4   LLFE-DLKLSREMKRAIADMGFEEATPIQSLALPPILDGKDVIGQAQTGTGKTAAFGIPV 62

Query: 80  LNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----K 135
           L KL    V+  Q +IL PTRE+A+Q+ + ++ +  + K   +  + GG  +ER     K
Sbjct: 63  LEKL-DPTVKGVQAVILCPTRELAIQVAEEIKKLSKYKKTAVLPVY-GGQPIERQIKALK 120

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
           R VQI++G+PGR+   I  + L MD V++ I+DEAD++++ GF +DI ++  Q+P  +QM
Sbjct: 121 RGVQIIIGTPGRVMDHIHRRTLRMDQVKMIILDEADEMLDMGFRDDIEFVLEQIPRERQM 180

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           L+ SAT S   L   +KY  +P           +L V      +PE +      V E+ K
Sbjct: 181 LLFSATMSPQILGITRKYQNNP----------EMLKVAHQEITVPEIQQIYFE-VKEQMK 229

Query: 256 ---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
              L +L+        ++F N + R + +  NL    + A+ L G   Q  R   ++ F+
Sbjct: 230 LDLLTRLIDMHNLKLSLVFCNTKRRVDRLVSNLQTRGYFADGLHGDMSQNQRDRVMNKFR 289

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           +G++ ILV TD+AARGID  +V+ V N ++P++   Y+HR+GR GR G  G   T VS +
Sbjct: 290 KGQIEILVATDVAARGIDVEDVEAVFNYDVPNNDEYYVHRIGRTGRAGKTGQAFTFVSGK 349

Query: 373 SLVKFHSL 380
            + +   +
Sbjct: 350 EIYQLRDI 357


>gi|349603549|gb|AEP99357.1| Eukaryotic initiation factor 4A-III-like protein, partial [Equus
           caballus]
          Length = 343

 Score =  209 bits (532), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 114/327 (34%), Positives = 185/327 (56%), Gaps = 19/327 (5%)

Query: 55  VLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVG 114
           ++ G D I QS+SGTGK+  F ++ L + + + V++ Q +ILAPTRE+AVQI   + ++G
Sbjct: 4   IIKGRDVIAQSQSGTGKTATFSISVL-QCLDIQVRETQALILAPTRELAVQIQKGLLALG 62

Query: 115 AHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEA 170
            ++ N+     IGGT V    R +     +V G+PGR+  MI+ + L   ++++ ++DEA
Sbjct: 63  DYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEA 121

Query: 171 DKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLL 230
           D+++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L 
Sbjct: 122 DEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLE 181

Query: 231 GVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLAN 287
           G+KQ    +            EE K   L  L       Q VIF N + + + + E +  
Sbjct: 182 GIKQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 231

Query: 288 ANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAA 347
           ANF    + G   QK R + +  F+ G  R+L++TD+ ARG+D   V L+IN ++P++  
Sbjct: 232 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 291

Query: 348 TYLHRMGRAGRYGTRGLVITIVSAESL 374
            Y+HR+GR+GRYG +G+ I  V  + +
Sbjct: 292 LYIHRIGRSGRYGRKGVAINFVKNDDI 318


>gi|301093191|ref|XP_002997444.1| ATP-dependent RNA helicase eIF4A, putative [Phytophthora infestans
           T30-4]
 gi|262110700|gb|EEY68752.1| ATP-dependent RNA helicase eIF4A, putative [Phytophthora infestans
           T30-4]
          Length = 411

 Score =  209 bits (532), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 126/367 (34%), Positives = 205/367 (55%), Gaps = 21/367 (5%)

Query: 13  DVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           D+ +N D + E  + + + + + +G+   GF K S IQ  A   +L G+D I Q++SGTG
Sbjct: 28  DIETNWDEVIETFDGMDLREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTG 87

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ 130
           K+  F V+ L K I + +++ Q +ILAPTRE+A QI  VV ++G ++ ++ V   +GGT 
Sbjct: 88  KTATFAVSILQK-IDINLKETQALILAPTRELAQQIVKVVVAIGDYM-SVQVHACVGGTA 145

Query: 131 VERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
           V    R +Q    IVVG+PGR+  MI  + L  D V++F++DEAD++++ GF + I  ++
Sbjct: 146 VRDDIRTLQQGVHIVVGTPGRVGDMINRRALRTDEVKMFVLDEADEMLSRGFKDQIYEVF 205

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPS 246
             LP   Q+ + SAT   D L    ++M +P+ I  +     L G+KQ    I       
Sbjct: 206 RFLPEKVQVALFSATMPLDVLEVTHRFMREPIRILVKRDELTLEGIKQFFIAIDR----- 260

Query: 247 LRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
                EE K   L  L       Q +I+ N + + + + E + + +F    + G  +Q+ 
Sbjct: 261 -----EEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRE 315

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G
Sbjct: 316 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKG 375

Query: 364 LVITIVS 370
           + I  ++
Sbjct: 376 VAINFLT 382


>gi|424659059|ref|ZP_18096310.1| cold-shock DEAD box protein A [Vibrio cholerae HE-16]
 gi|408053406|gb|EKG88421.1| cold-shock DEAD box protein A [Vibrio cholerae HE-16]
          Length = 646

 Score =  209 bits (532), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 206/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L+G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLDGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|422910192|ref|ZP_16944833.1| cold-shock DEAD box protein A [Vibrio cholerae HE-09]
 gi|341633696|gb|EGS58485.1| cold-shock DEAD box protein A [Vibrio cholerae HE-09]
          Length = 646

 Score =  209 bits (532), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 206/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L+G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLDGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|384423097|ref|YP_005632456.1| cold-shock DEAD-box protein A [Vibrio cholerae LMA3984-4]
 gi|327485805|gb|AEA80211.1| Cold-shock DEAD-box protein A [Vibrio cholerae LMA3984-4]
          Length = 644

 Score =  209 bits (532), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 206/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L E GFV  +PIQ AA P +L+G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTEMGFVSPTPIQAAAIPVLLDGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -NLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    FI+DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKEIVERFLRNPECVD--VAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRSSMEEIQLPH 375


>gi|6320041|ref|NP_010121.1| Dhh1p [Saccharomyces cerevisiae S288c]
 gi|729329|sp|P39517.1|DHH1_YEAST RecName: Full=ATP-dependent RNA helicase DHH1; AltName:
           Full=DExD/H-box helicase 1
 gi|160380644|sp|A6ZXG9.1|DHH1_YEAS7 RecName: Full=ATP-dependent RNA helicase DHH1; AltName:
           Full=DExD/H-box helicase 1
 gi|4353|emb|CAA46853.1| RNA-helicase of the DEAD-BOX family [Saccharomyces cerevisiae]
 gi|1061279|emb|CAA91586.1| putative RNA helicase [Saccharomyces cerevisiae]
 gi|1431254|emb|CAA98734.1| DHH1 [Saccharomyces cerevisiae]
 gi|151941843|gb|EDN60199.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
 gi|190405159|gb|EDV08426.1| hypothetical protein SCRG_00654 [Saccharomyces cerevisiae RM11-1a]
 gi|285810876|tpg|DAA11700.1| TPA: Dhh1p [Saccharomyces cerevisiae S288c]
 gi|323309886|gb|EGA63088.1| Dhh1p [Saccharomyces cerevisiae FostersO]
 gi|349576920|dbj|GAA22089.1| K7_Dhh1p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|365766697|gb|EHN08192.1| Dhh1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392300665|gb|EIW11756.1| Dhh1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 506

 Score =  209 bits (532), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 135/388 (34%), Positives = 205/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 36  QTDDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGT 94

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 95  GKTAAFVIPTLEK-VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 152

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V I+VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 153 NLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQI 212

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
            S LPP  Q L+ SAT+       + K++  P  I   E+ T  L G+ Q  A       
Sbjct: 213 LSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELT--LKGITQYYA------- 263

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 264 ----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 319

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 320 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 379

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 380 LGLAINLINWNDRFNLYKIEQELGTEIA 407


>gi|255731175|ref|XP_002550512.1| eukaryotic initiation factor 4A-12 [Candida tropicalis MYA-3404]
 gi|240132469|gb|EER32027.1| eukaryotic initiation factor 4A-12 [Candida tropicalis MYA-3404]
          Length = 399

 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 198/356 (55%), Gaps = 14/356 (3%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I    
Sbjct: 34  KPELLKGIYAYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGML-EVIDTKS 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGS 144
           ++ Q +IL+PTRE+A QI +VV+ +G ++ N+H    IGG  V    ++ ++  QIV G+
Sbjct: 93  KECQALILSPTRELATQIQNVVKHLGDYM-NIHTHACIGGKNVGDDVKKLQQGQQIVSGT 151

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  +IK + L   ++++ I+DEAD+L   GF E I  IY  LPP  Q++VVSAT S 
Sbjct: 152 PGRVLDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPAVQVVVVSATLSR 211

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
           + L    K+  DP+ I  +     L G+KQ      +C+    ++      L  L     
Sbjct: 212 EVLEMTSKFTTDPVKILVKQDEISLSGIKQYYV---QCEQEDWKF----DTLCDLYDNLT 264

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N +L+   + + +   NF    + G   Q  R + ++ F+ G  R+L++TD+
Sbjct: 265 ITQAVIFCNTKLKVNWLTDQMRKQNFTVVSMHGDMKQDERESIMNDFRTGNSRVLISTDV 324

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G  I +++ + +     L
Sbjct: 325 WARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVSTLKEL 380


>gi|399216308|emb|CCF72996.1| unnamed protein product [Babesia microti strain RI]
          Length = 416

 Score =  209 bits (531), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 128/370 (34%), Positives = 204/370 (55%), Gaps = 34/370 (9%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+ + D +  N+ L+     +G+   GF K S IQ      +L  YD I Q++SGTGK+
Sbjct: 39  EVVDSFDAMKLNENLL-----RGIYSYGFEKPSAIQQRGIKPILENYDTIGQAQSGTGKT 93

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE 132
             F +AAL ++I   ++  Q +ILAPTRE+A QI  VV ++G ++ N+     +GGT V 
Sbjct: 94  ATFTIAAL-QIIDYNIRSCQVLILAPTRELAQQIQKVVLALGDYL-NVQCHACVGGTVVR 151

Query: 133 ----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
               + K  V +VVG+PGR+  MI+ + L  D ++LFI+DEAD++++ GF   I  I+ +
Sbjct: 152 EDASKLKAGVHMVVGTPGRVFDMIEKRILKTDKMKLFILDEADEMLSRGFKSQIYDIFRR 211

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPS 246
           +P   Q+ + SAT   D L   +K+M  P  +L++ ++ T  L G+KQ            
Sbjct: 212 IPGEVQVALFSATMPQDILELTKKFMRSPKRILVKKDELT--LEGIKQY----------- 258

Query: 247 LRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQD 300
             YV  EK+      L  +       Q +I+ N + + +++   +   +F    + G  D
Sbjct: 259 --YVSIEKEEWKFETLCDIYETVTITQAIIYCNTRRKVDMLTSKMQEKDFTVSSMHGDMD 316

Query: 301 QKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYG 360
           QK R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     Y+HR+GR+GR+G
Sbjct: 317 QKERDLIMREFRSGSTRVLITTDLLARGIDVQQVSLVINYDLPISPENYIHRIGRSGRFG 376

Query: 361 TRGLVITIVS 370
            +G+ I  V+
Sbjct: 377 RKGVAINFVT 386


>gi|303279777|ref|XP_003059181.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459017|gb|EEH56313.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 343

 Score =  209 bits (531), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 122/353 (34%), Positives = 194/353 (54%), Gaps = 20/353 (5%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +GL   GF   SP+Q AA P    G D +VQ+KSGTGK++ F    L ++ +  ++ PQ 
Sbjct: 5   EGLAAAGFHVPSPVQRAAIPLGRLGADLVVQAKSGTGKTVAFAAILLERVDR-ALRHPQA 63

Query: 94  IILAPTREIAVQITDVVRSVGAHVK--NLHVDYFIGGTQVERPK----RPVQIVVGSPGR 147
           +++APTRE+A+Q  DVV S+   +   +L +   +GG  V   +    R  Q+ VG+PGR
Sbjct: 64  VVVAPTREVALQSHDVVASLANSLAPPSLSLRACLGGLPVASDRAALVRGAQLCVGTPGR 123

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           ++Q+++   ++ D VR  ++DEAD L+   F  D+ +I+  LP  KQ +  SATY  +  
Sbjct: 124 LRQLLEEGSIHPDGVRCVVIDEADALMGGSFEADVLFIHGVLPARKQTMAFSATYPTEMR 183

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
           A +++      L R +     L  V+Q   L+           D++           F+Q
Sbjct: 184 ARVRE------LTRRDVHEVALRAVRQFYFLV-------DDDDDDDDDDDDDDDDVSFHQ 230

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            V+F+        + E L  A F AE++ GA  Q+ R+  + + +    R++V+TDL AR
Sbjct: 231 AVVFARRPAWGSAVAERLVAAGFAAEFIGGALPQRRRMDVVAAMRAFDARVMVSTDLTAR 290

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           G+D A V+LV+ L+IP D  TYLHR+GRAGR+G RG+ + +V+A  L    +L
Sbjct: 291 GVDLARVNLVVCLDIPRDRETYLHRVGRAGRFGARGVAVAVVTARELKALRAL 343


>gi|261250797|ref|ZP_05943371.1| cold-shock DEAD-box protein A [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|417953999|ref|ZP_12597040.1| cold-shock DEAD-box protein A [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|260937670|gb|EEX93658.1| cold-shock DEAD-box protein A [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|342816267|gb|EGU51169.1| cold-shock DEAD-box protein A [Vibrio orientalis CIP 102891 = ATCC
           33934]
          Length = 660

 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 205/380 (53%), Gaps = 20/380 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           V+  +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  
Sbjct: 5   VIQFSDLALNDSILSALDGMGFVSPTPIQAAAIPHLLAGKDALGKAQTGTGKTAAFSLPL 64

Query: 80  LNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ 139
           LNKL  L  ++PQ IILAPTRE+A+Q+   V+++G ++  L V    GG  +    R ++
Sbjct: 65  LNKL-DLAQRKPQAIILAPTRELAIQVAAEVKNLGKNIAGLKVLEIYGGASIVDQMRALK 123

Query: 140 ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
               IVVG+PGR++ +I    L++D V  F++DEAD+++N GFV+D+T I    P   Q 
Sbjct: 124 NGAHIVVGTPGRVQDLINRDRLHLDEVHTFVLDEADEMLNMGFVDDVTEIMEHAPSSAQR 183

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           ++ SAT      + +++++ DP  I        +  V+Q   ++        + V++++ 
Sbjct: 184 VLFSATMPPMLKSIVERFLRDPETIDVAGKNHTVDKVEQQFWVV--------KGVEKDEA 235

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           + +LL     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G 
Sbjct: 236 MSRLLETEETDASIVFVRTRQDTERLADWLCARGFKASALHGDIPQSLRERTVDHIKQGV 295

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
           + ILV TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    L 
Sbjct: 296 IDILVATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQLR 355

Query: 376 KFHSL-------MGEINLDH 388
              ++       M EI L H
Sbjct: 356 MLRTIERVTKSSMEEIQLPH 375


>gi|354489198|ref|XP_003506751.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Cricetulus
           griseus]
          Length = 542

 Score =  209 bits (531), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/337 (36%), Positives = 189/337 (56%), Gaps = 19/337 (5%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPT 99
           GF K S IQ  A   ++ G D I QS+SGTGK+  F ++ L  L  + V++ Q +ILAPT
Sbjct: 181 GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCL-DIQVRETQALILAPT 239

Query: 100 REIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLK 155
           RE+AVQI   + ++G ++ N+     IGGT V    R +     +V G+PGR+  MI+ +
Sbjct: 240 RELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRR 298

Query: 156 YLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMV 215
            L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  H+ L    K+M 
Sbjct: 299 SLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMT 358

Query: 216 DPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFS 272
           DP+ I  +     L G+KQ    +            EE K   L  L       Q VIF 
Sbjct: 359 DPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYDTLTITQAVIFC 408

Query: 273 NYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAA 332
           N + + + + E +  ANF    + G   QK R + +  F+ G  R+L++TD+ ARG+D  
Sbjct: 409 NTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVP 468

Query: 333 NVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            V L+IN ++P++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 469 QVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFV 505


>gi|198423899|ref|XP_002126471.1| PREDICTED: similar to Eukaryotic initiation factor 4A-III
           (Eukaryotic translation initiation factor 4A isoform 3)
           (ATP-dependent RNA helicase eIF4A-3) (ATP-dependent RNA
           helicase DDX48) (DEAD box protein 48) (Eukaryotic
           initiation factor 4A-like NUK-34) (Nucl... [Ciona
           intestinalis]
          Length = 409

 Score =  209 bits (531), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 123/366 (33%), Positives = 202/366 (55%), Gaps = 22/366 (6%)

Query: 17  NIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           ++   F++  L E  +R G+   GF K S IQ  A   +  G D I Q++SGTGK+  F 
Sbjct: 33  DVTATFDSMGLREDLLR-GIYAYGFEKPSAIQQRAIKQITKGRDVIAQAQSGTGKTATFS 91

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           ++ L ++I   ++  Q ++L+PTRE+A QI  V+ ++G ++ ++     IGGT V    R
Sbjct: 92  ISVL-QMIDTQLRDTQALVLSPTRELAQQIQKVILALGDYM-SVQCHACIGGTNVGEDIR 149

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   S+++ I+DE+D+++N GF E I  +Y  LPP 
Sbjct: 150 KLDYGQHVVSGTPGRVFDMIRRRSLRTRSIKMLILDESDEMLNKGFKEQIYDVYRYLPPA 209

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ               VD+
Sbjct: 210 IQVVLLSATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVA-----------VDK 258

Query: 253 EK----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           E+     L  L       Q VIF N + + + + E + +ANF    + G   QK R   +
Sbjct: 259 EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRDANFTVLCMHGDMPQKERTEIM 318

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G+ R+L+ TD+ ARG+D   V L+IN ++P++   Y+HR+GR+GRYG +G+ I  
Sbjct: 319 KQFRSGESRVLICTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVSINF 378

Query: 369 VSAESL 374
           V  + +
Sbjct: 379 VKNDDI 384


>gi|307111380|gb|EFN59614.1| hypothetical protein CHLNCDRAFT_29172 [Chlorella variabilis]
          Length = 402

 Score =  209 bits (531), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 193/354 (54%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+ + GF K S IQ  A   +  G D I Q++SGTGK+ +  +  L +++   
Sbjct: 36  LREQLLRGIYQFGFEKPSAIQQRAVLPITQGRDVIAQAQSGTGKTSLIAIT-LCQMLDTT 94

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVG 143
           +++ Q ++L+PTRE+A Q    + ++G H+  +     IGG  V     + +  V IV G
Sbjct: 95  LREVQALVLSPTRELATQTEKNILAIGDHMA-VQAHACIGGKSVGDDIRKLENGVHIVSG 153

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++  ++DEAD+++N GF E I  IY  LPP  Q+++VSAT  
Sbjct: 154 TPGRVFDMIKRRSLRTRNIKTLVLDEADEMLNKGFKEQIYDIYRYLPPETQVVLVSATLP 213

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 214 HEVLEMTHKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 263

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +   NF    + G   QK R A +D F++G  R+L+
Sbjct: 264 DTLTITQAVIFCNTKRKVDWLTEKMRQNNFTVSAMHGDMPQKEREAIMDEFRKGATRVLI 323

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P+    Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 324 TTDVWARGLDVQQVSLVINYDLPNSRELYIHRIGRSGRFGRKGVAINFVKNDDI 377


>gi|84995732|ref|XP_952588.1| eukaryotic translation initiation factor 4a [Theileria annulata
           strain Ankara]
 gi|65302749|emb|CAI74856.1| eukaryotic translation initiation factor 4a, putative [Theileria
           annulata]
          Length = 400

 Score =  208 bits (530), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 131/377 (34%), Positives = 207/377 (54%), Gaps = 29/377 (7%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+ + D L  N+ L+     +G+   GF + S IQ      ++  YD I Q++SGTGK+
Sbjct: 25  EVVDSFDALKLNEDLL-----RGIYSYGFERPSAIQQRGIKPIIENYDTIGQAQSGTGKT 79

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT--- 129
             F +AAL ++I   V   Q +ILAPTRE+A QI  VV ++G ++K +     +GGT   
Sbjct: 80  ATFSIAAL-QIINYDVMSCQILILAPTRELAQQIQKVVLALGDYLK-VQCHACVGGTVVR 137

Query: 130 -QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
             V + K  V +VVG+PGR+  MI+ K L  D ++LFI+DEAD++++ GF   I  ++ +
Sbjct: 138 DDVHKLKAGVHMVVGTPGRVYDMIEKKALLTDKMKLFILDEADEMLSRGFKGQIQDVFKR 197

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPS 246
           LPP  Q+ + SAT  ++ L    K+M  P  +L++ ++ T  L G+KQ   LI       
Sbjct: 198 LPPDIQVALFSATMPNEILELTTKFMRSPKRILVKKDELT--LEGIKQFYILI------- 248

Query: 247 LRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               D+E K   L  L       Q +I+ N + + + +   +   +F    + G   QK 
Sbjct: 249 ----DKEYKFETLCDLYESVTITQAIIYCNTRRKVDYLTLKMQEKDFTVSSMHGDMGQKE 304

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     Y+HR+GR+GR+G +G
Sbjct: 305 RDLIMREFRSGSTRVLITTDLLARGIDVQQVSLVINYDLPMSPDNYIHRIGRSGRFGRKG 364

Query: 364 LVITIVSAESLVKFHSL 380
           + I  V+ + +    S+
Sbjct: 365 VAINFVTHQDMETMKSI 381


>gi|255559772|ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
 gi|223539871|gb|EEF41450.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
          Length = 407

 Score =  208 bits (530), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 195/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+ +  + A  +L+   
Sbjct: 41  IKNDLLRGIYAYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTAC-QLVDTS 99

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G ++ N+     IGG  V    R     V +V G
Sbjct: 100 SREVQALILSPTRELAAQTEKVILAIGDYI-NIQAHACIGGKSVGEDIRKLEYGVHVVSG 158

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++L ++DE+D++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 159 TPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 218

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 219 NEILEMTSKFMTDPIKILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 268

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + N NF    + G   QK R A +  F+ G  R+L+
Sbjct: 269 DTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSSMHGDMPQKERDAIMGEFQSGTTRVLI 328

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 329 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 382


>gi|260770312|ref|ZP_05879245.1| cold-shock DEAD-box protein A [Vibrio furnissii CIP 102972]
 gi|260615650|gb|EEX40836.1| cold-shock DEAD-box protein A [Vibrio furnissii CIP 102972]
          Length = 632

 Score =  208 bits (530), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 140/426 (32%), Positives = 225/426 (52%), Gaps = 34/426 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L + GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTDMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   V+++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLNQYKPQAIVMAPTRELAIQVAAEVKNLGQNIKGLKVLEIYGGASIVDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I  + L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLISRERLHLDECHTFVLDEADEMLKMGFVDDVTWIMEQAPETAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +VD  L  P  A   + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKDIVDRFLRDP--ARVDVAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVEQTAE 432
           +       M EI L H             D++   +  Q  LA  L+  +E   +E+ AE
Sbjct: 360 IERVTRSSMEEIQLPHR------------DKVAEARLSQ--LAIELEAEKEHASLEKFAE 405

Query: 433 ESSKVE 438
              K++
Sbjct: 406 LVEKLQ 411


>gi|78486348|ref|YP_392273.1| DEAD/DEAH box helicase [Thiomicrospira crunogena XCL-2]
 gi|78364634|gb|ABB42599.1| DEAD/DEAH box helicase [Thiomicrospira crunogena XCL-2]
          Length = 574

 Score =  208 bits (530), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 141/433 (32%), Positives = 225/433 (51%), Gaps = 25/433 (5%)

Query: 17  NIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           N ++ F +D+ +  PI + L+E G+   SPIQ  A P +L G D +  +++GTGK+  F 
Sbjct: 2   NTEIKF-SDLGLSAPILKTLEEIGYETPSPIQEQAIPVLLKGGDILGMAQTGTGKTAAFA 60

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVE 132
           +  L+K I L  + PQ ++LAPTRE+A+Q+ +  ++    VK LHV    GG    TQ+ 
Sbjct: 61  LPILSK-IDLKQKDPQVLVLAPTRELAIQVAEAFQTFSRGVKGLHVLPIYGGSEYGTQIR 119

Query: 133 RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
             KR V +VVG+PGR+   IK   L +D++++ I+DEAD+++  GF++D+ WI    P  
Sbjct: 120 ALKRGVHVVVGTPGRVMDHIKKGTLKLDTLKVMILDEADEMLRMGFIDDVEWILKHTPDT 179

Query: 193 KQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
           +Q+ + SAT   +       Y+ DP  ++I+ + AT  L+  K  +          L  +
Sbjct: 180 RQIALFSATMPKEVHRIANTYLQDPTEVIIKQKAATASLIEQKYWLV-------SGLHKL 232

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
           D    L ++L    F+  +IF   +     + E L    + A  L+G   Q  R  ++D 
Sbjct: 233 D---ALTRILEAETFDGIIIFVRTKTATVELAEKLEARGYAAAALNGDVAQNQRERTVDQ 289

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            K+GK+ IL+ TD+ ARG+D   +  VIN +IP+D  +Y+HR+GR GR G  G  I  V+
Sbjct: 290 LKKGKLDILIATDVVARGLDVERISHVINYDIPYDNESYVHRIGRTGRAGRSGTAILFVA 349

Query: 371 AESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQERE-DVEQ 429
                   S+  E +         +P   T  +IN   R+     K +D AQ  + D  Q
Sbjct: 350 PRERRLLRSI--EASTKKKITQMELP---TAQEIN-DSRITRFKDKIVDAAQGTDLDFYQ 403

Query: 430 TAEESSKVENTKP 442
              ES + +N  P
Sbjct: 404 KMVESIESDNNIP 416


>gi|345873134|ref|ZP_08825053.1| DEAD/DEAH box helicase domain protein [Thiorhodococcus drewsii AZ1]
 gi|343917536|gb|EGV28334.1| DEAD/DEAH box helicase domain protein [Thiorhodococcus drewsii AZ1]
          Length = 635

 Score =  208 bits (530), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/342 (33%), Positives = 191/342 (55%), Gaps = 13/342 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + Q +++ G+   + IQ    P++L G D + Q+++GTGK+  F +  L++ I   ++QP
Sbjct: 19  VEQAVKDLGYESPTAIQGQCIPHLLAGRDLLGQAQTGTGKTAAFALPLLSR-IDPSLKQP 77

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+A+Q+ +  +    H++  +V    GG     Q+   KR  Q++VG+PGR
Sbjct: 78  QVLVLAPTRELALQVAEAFQQYATHLRGFNVLPIYGGQGYGLQLSHLKRNPQVIVGTPGR 137

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   I+   L+MD +R  ++DEAD+++N GF EDI WI+ Q P  +Q+ + SAT      
Sbjct: 138 VMDHIRRGTLSMDGIRTLVLDEADEMLNMGFAEDIDWIFDQAPEKRQVALFSATMPPVIR 197

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
              Q+ +VDP+ +R    +  +  + Q       C       +D    L ++L   PF+ 
Sbjct: 198 KVAQERLVDPIEVRIASNSETVDTIDQ-----HHCIVTRFHKLD---ILTRILELEPFDG 249

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            +IF   +     + + L    F AE L+G  +Q+ R  +++  K+G++ ILV TD+AAR
Sbjct: 250 MLIFVRTKNATTELSDKLKAHGFAAEPLNGDMNQEMRERTVERLKQGQLDILVATDVAAR 309

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           G+D   +  V+N +IP D A Y+HR+GR GR G  G  I +V
Sbjct: 310 GLDVDRISHVVNYDIPTDPAAYVHRIGRTGRAGRSGRAILLV 351


>gi|375132206|ref|YP_005048614.1| ATP-dependent RNA helicase DeaD [Vibrio furnissii NCTC 11218]
 gi|315181381|gb|ADT88294.1| ATP-dependent RNA helicase DeaD [Vibrio furnissii NCTC 11218]
          Length = 632

 Score =  208 bits (530), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 140/426 (32%), Positives = 225/426 (52%), Gaps = 34/426 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L + GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSAILSALTDMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   V+++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLNQYKPQAIVMAPTRELAIQVAAEVKNLGQNIKGLKVLEIYGGASIVDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I  + L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLISRERLHLDECHTFVLDEADEMLKMGFVDDVTWIMEQAPETAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +VD  L  P  A   + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKDIVDRFLRDP--ARVDVAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVEQTAE 432
           +       M EI L H             D++   +  Q  LA  L+  +E   +E+ AE
Sbjct: 360 IERVTRSSMEEIQLPHR------------DKVAEARLSQ--LAIELEAEKEHASLEKFAE 405

Query: 433 ESSKVE 438
              K++
Sbjct: 406 LVEKLQ 411


>gi|126274138|ref|XP_001387431.1| RNA helicase involved in maturation of 18S rRNA [Scheffersomyces
           stipitis CBS 6054]
 gi|146286171|sp|A3GFV3.1|FAL1_PICST RecName: Full=ATP-dependent RNA helicase FAL1
 gi|126213301|gb|EAZ63408.1| RNA helicase involved in maturation of 18S rRNA [Scheffersomyces
           stipitis CBS 6054]
          Length = 399

 Score =  208 bits (530), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 198/350 (56%), Gaps = 14/350 (4%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   ++NG D I Q++SGTGK+  F +  L   I    
Sbjct: 34  KPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIAQAQSGTGKTATFSIGMLQA-IDTNA 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGS 144
           +  Q +IL+PTRE+AVQI +VV+ +G ++ N+H    IGGT V    ++ K+  QIV G+
Sbjct: 93  KDCQALILSPTRELAVQIQNVVKHLGDYM-NIHTHACIGGTHVGDDIKKLKQGQQIVSGT 151

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  M+K + L+  ++++ I+DEAD+L   GF E I  +Y  LPP  Q++VVSAT S 
Sbjct: 152 PGRVVDMVKRQQLSTRNIKMLILDEADELFTKGFKEQIYEVYKYLPPSVQVVVVSATLSR 211

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
           + L    K+  DP+ I  +     L G+KQ      +C+    ++      L  L     
Sbjct: 212 EVLEMTNKFTTDPVKILVKRDQITLEGIKQYHV---QCEKEDWKF----DTLCDLYDNLT 264

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N +L+   + + +   NF    + G   Q  R + ++ F+ G  R+L++TD+
Sbjct: 265 ITQAVIFCNTKLKVNWLTDQMRKQNFTVVSMHGDMKQDERDSIMNDFRTGNSRVLISTDV 324

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
            ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G+ I +++ E +
Sbjct: 325 WARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGVAINLITKEDV 374


>gi|209879275|ref|XP_002141078.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
 gi|209556684|gb|EEA06729.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
          Length = 397

 Score =  208 bits (530), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 132/389 (33%), Positives = 211/389 (54%), Gaps = 29/389 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E+ +R G+   GF   S +Q  A   ++ G D +VQS+SGTGK+ VF V AL 
Sbjct: 25  FESMDLKEELLR-GIYSYGFELPSVVQKRAIVPIIKGRDVVVQSQSGTGKTCVFTVGALQ 83

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ-- 139
              +   + PQ +IL+PTRE+A Q   V  ++G ++ +++V   +GG ++    + +Q  
Sbjct: 84  LCNRTTERLPQALILSPTRELAEQSQKVCSALGEYL-DINVYCCVGGRKLNDDIKALQSG 142

Query: 140 --IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+  YL    +RL I+DEAD++++ GF   +  IY  LPP  Q+++
Sbjct: 143 VTIVSGTPGRVIHMIEQGYLITRRIRLLILDEADEMLDFGFKRQVYDIYKYLPPRIQIIL 202

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK--- 254
           VSAT   + +   +K M DPL I  +     L G++Q              YV++E+   
Sbjct: 203 VSATLPEEIIEITEKIMKDPLKILVKRDNLTLEGIRQFYI-----------YVEQEQWKF 251

Query: 255 -KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + E +   +   +F   ++ G   QK R   L  F++
Sbjct: 252 DTLCDLYDTLTITQSVIFCNKKAKVEWLSSKMIENHFTVSFVHGDLSQKDREQILREFRQ 311

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           GK R+L+ TDL  RGID   ++LVIN +IP +   Y+HR+GR+GR+G +G+ I +V  E 
Sbjct: 312 GKTRVLIATDLWGRGIDIQQINLVINYDIPTNKELYIHRIGRSGRFGRKGVAINLVKEEE 371

Query: 374 LVKFHSLMGEINLDHAFNVGL--VPDNLT 400
           +          +++H F+  +  +P N+T
Sbjct: 372 VKILK------DIEHFFSTRIEEMPANIT 394


>gi|238878859|gb|EEQ42497.1| hypothetical protein CAWG_00709 [Candida albicans WO-1]
          Length = 550

 Score =  208 bits (530), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 202/368 (54%), Gaps = 22/368 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKSFE-DFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  L +L+K  + + Q +IL PTRE+A+Q + VVR++G HV         GGT
Sbjct: 79  GKTASFIIPCL-QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGT-QCMVTTGGT 136

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV I+VG+PGR+  +   K +++    LF+MDEADK+++  F   I  I
Sbjct: 137 SLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLLECPLFVMDEADKMLSREFKGIIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               PP +Q L+ SAT+     + + K++  P  I   D    L G+ Q  A        
Sbjct: 197 LEFFPPNRQALLFSATFPLAVKSFMDKHLTKPYEINLMDELT-LKGISQFYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 248 ---FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQ 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIVS 370
           GL I ++S
Sbjct: 365 GLAINLMS 372


>gi|386812364|ref|ZP_10099589.1| RNA helicase [planctomycete KSU-1]
 gi|386404634|dbj|GAB62470.1| RNA helicase [planctomycete KSU-1]
          Length = 568

 Score =  208 bits (530), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 118/370 (31%), Positives = 206/370 (55%), Gaps = 13/370 (3%)

Query: 15  LSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIV 74
           L++I+ L   D+ + + +R+ +++ GF + +PIQ  A PY+L G D I Q+++GTGK+  
Sbjct: 19  LTDIEKLRFEDLHVSEELRKAIKDMGFEEATPIQYQAIPYILKGKDIIGQAQTGTGKTAA 78

Query: 75  FVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP 134
           F +  L ++I    ++ Q IIL PTRE+A+Q+ + ++ +  + K + +    GG  +ER 
Sbjct: 79  FGIPTL-EMIDPGTRELQAIILCPTRELAIQVAEEMKKLSKYKKAIEILPIYGGQPIERQ 137

Query: 135 ----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
               K+ VQI++G+PGR+   +  + L MD+VR+ I+DEAD++++ GF EDI +I  ++ 
Sbjct: 138 IKALKKGVQIIIGTPGRVMDHMNRRTLKMDAVRIIILDEADEMLDMGFREDIEFIMEKIS 197

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
             +Q ++ SAT     L   +KY  DP  I+        L V  +     E K  +    
Sbjct: 198 RKRQTILFSATMPQAILDLTKKYQNDPQFIK---VVHKELTVPYIEQFYFEVKEQA---- 250

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
            + + L +L+        ++F N + R + + E+L    + A+ L G   Q  R + +  
Sbjct: 251 -KLETLSRLIDIYNLKLSLVFCNTKRRVDDLVEHLQARGYLADGLHGDMRQSQRNSVMSK 309

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           F++G + IL+ TD+AARGID  +++ V N ++PHD   Y+HR+GR GR G +G   T V 
Sbjct: 310 FRKGTIEILIATDVAARGIDVEDIEAVFNYDVPHDEEYYVHRIGRTGRAGRKGRSFTFVV 369

Query: 371 AESLVKFHSL 380
              + +   +
Sbjct: 370 GREIYQIKDI 379


>gi|326502382|dbj|BAJ95254.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 412

 Score =  208 bits (529), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 120/354 (33%), Positives = 200/354 (56%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +G+ + GF K S IQ  A   ++ G D I Q++SGTGK+ + +  ++ ++I+  
Sbjct: 46  IREDLLRGIYDYGFEKPSAIQQRAVIPIITGRDVIAQAQSGTGKTSM-ISLSVCQVIETN 104

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
           V + Q +IL+PTRE+A Q   V+++VG+ + ++ V   +GG  +    R     V +V G
Sbjct: 105 VHEVQALILSPTRELATQTERVMQAVGSFM-SVSVHACVGGKSIGEDIRKLESGVHVVSG 163

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++L ++DEAD++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 164 TPGRVCDMIKRRTLRTRAIKLLVLDEADEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 223

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           HD L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 224 HDILEITSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 273

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +   NF    + G   QK R A ++ F+ G  R+L+
Sbjct: 274 DTLTITQAVIFCNTKRKVDWLTERMRTNNFTVSAMHGDMPQKERDAIMNEFRGGTTRVLI 333

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 334 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRKDDI 387


>gi|71030100|ref|XP_764692.1| RNA helicase-1 [Theileria parva strain Muguga]
 gi|68351648|gb|EAN32409.1| RNA helicase-1, putative [Theileria parva]
          Length = 400

 Score =  208 bits (529), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 131/377 (34%), Positives = 207/377 (54%), Gaps = 29/377 (7%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+ + D L  N+ L+     +G+   GF + S IQ      ++  YD I Q++SGTGK+
Sbjct: 25  EVVDSFDALKLNEDLL-----RGIYSYGFERPSAIQQRGIKPIIENYDTIGQAQSGTGKT 79

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT--- 129
             F +AAL ++I   V   Q +ILAPTRE+A QI  VV ++G ++K +     +GGT   
Sbjct: 80  ATFSIAAL-QIINYDVMSCQILILAPTRELAQQIQKVVLALGDYLK-VQCHACVGGTVVR 137

Query: 130 -QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
             V + K  V +VVG+PGR+  MI+ K L  D ++LFI+DEAD++++ GF   I  ++ +
Sbjct: 138 DDVHKLKAGVHMVVGTPGRVYDMIEKKALLTDKMKLFILDEADEMLSRGFKGQIQDVFKR 197

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPS 246
           LPP  Q+ + SAT  ++ L    K+M  P  +L++ ++ T  L G+KQ   LI       
Sbjct: 198 LPPDIQVALFSATMPNEILELTTKFMRSPKRILVKKDELT--LEGIKQFYILI------- 248

Query: 247 LRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
               D+E K   L  L       Q +I+ N + + + +   +   +F    + G   QK 
Sbjct: 249 ----DKEYKFETLCDLYESVTITQAIIYCNTRRKVDYLTLKMQEKDFTVSSMHGDMGQKE 304

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     Y+HR+GR+GR+G +G
Sbjct: 305 RDLIMREFRSGSTRVLITTDLLARGIDVQQVSLVINYDLPMSPDNYIHRIGRSGRFGRKG 364

Query: 364 LVITIVSAESLVKFHSL 380
           + I  V+ + +    S+
Sbjct: 365 VAINFVTHQDMDTMKSI 381


>gi|254168903|ref|ZP_04875743.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
           T469]
 gi|197622167|gb|EDY34742.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
           T469]
          Length = 451

 Score =  208 bits (529), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 126/356 (35%), Positives = 202/356 (56%), Gaps = 27/356 (7%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I K  +  L+E+ FV+ + +Q  A P  + G D IVQSK+G+GK++ F++     L 
Sbjct: 8   DMSISKGTKNALKEHNFVEPTEVQEKAIPLAIKGRDLIVQSKTGSGKTLAFLIPIFENL- 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVG-AHVKNLHVDYFIGGTQVERP---KRPVQI 140
                  + I+L PTRE+A Q+  V RS+G AH K   V Y  GG  +ER     +   +
Sbjct: 67  ---NSGLEAIVLVPTRELAQQVERVARSIGKAHGKRTVVIY--GGAPMERQIAGLKGASM 121

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V+G+PGR+  +++  YLN++ +R F++DEAD++++ GF++DI WI  + P  KQM++ SA
Sbjct: 122 VIGTPGRVMDLMRRGYLNLNGIRFFVLDEADRMLDMGFIDDIKWILQKTPKDKQMMLFSA 181

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD--EEKKLVQ 258
           T   + ++  ++YM +P  I        +L   ++ A     +N +  YV+  E  K+ +
Sbjct: 182 TMPPEIISLARRYMKNPEKI--------ILSEDEITA-----ENVAQYYVEVGEINKIAK 228

Query: 259 LLSQ--TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
           L S   +   + +IF N + + + I E L    F A  L G   Q  R  ++D+FK+GK+
Sbjct: 229 LSSLLISERGKYLIFCNTRRKTKNIAEILQKYGFKAFALHGDMRQATRTRTMDAFKQGKI 288

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
            ILV+TD+AARGID   +  V+N ++P     Y+HR+GR GR    G  IT V+ E
Sbjct: 289 DILVSTDVAARGIDVHGITHVVNYDVPLYPKDYVHRIGRTGRMDAHGKAITFVTRE 344


>gi|348690313|gb|EGZ30127.1| hypothetical protein PHYSODRAFT_358814 [Phytophthora sojae]
          Length = 573

 Score =  208 bits (529), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 195/346 (56%), Gaps = 19/346 (5%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + +G+   GF K S IQ  A   +L G+D I Q++SGTGK+  F V+ L K I + +++ 
Sbjct: 211 LLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAVSILQK-IDINLKET 269

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGR 147
           Q +ILAPTRE+A QI  VV ++G ++ ++ V   +GGT V    R +Q    IVVG+PGR
Sbjct: 270 QALILAPTRELAQQIVKVVVAIGDYM-SVQVHACVGGTAVRDDIRTLQQGVHIVVGTPGR 328

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +  MI  + L  D V++F++DEAD++++ GF + I  ++  LP   Q+ + SAT   D L
Sbjct: 329 VGDMINRRALRTDEVKMFVLDEADEMLSRGFKDQIYEVFRFLPEKVQVALFSATMPLDVL 388

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTP 264
              +++M +P+ I  +     L G+KQ    I            EE K   L  L     
Sbjct: 389 EVTRRFMREPIRILVKRDELTLEGIKQFFIAIDR----------EEWKFDTLCDLYETLT 438

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q +I+ N + + + + E + + +F    + G  +Q+ R   +  F+ G  R+L+TTDL
Sbjct: 439 ITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDL 498

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  ++
Sbjct: 499 LARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLT 544


>gi|428672890|gb|EKX73803.1| eukaryotic translation initiation factor 4A, putative [Babesia
           equi]
          Length = 391

 Score =  208 bits (529), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 201/358 (56%), Gaps = 26/358 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE D+ +++ I +G+   GF + S +Q  A   +L+G D I+QS+SGTGK+ VF + AL 
Sbjct: 20  FE-DLGLKEEILKGIFAYGFDRPSAVQQRAIKPILDGRDVIIQSQSGTGKTCVFCLGALQ 78

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP---- 137
             +   V++ Q ++L+PTRE+A Q   V  ++G +  N+ V   IGG +V    +     
Sbjct: 79  T-VNSTVKETQVLLLSPTRELAEQSQKVCLALGDYC-NVEVHCCIGGKKVSDDIKALESG 136

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQIV G+PGR+  MI  K+LN  +++  I+DEAD+++N GF + +  IY  LPP  Q++V
Sbjct: 137 VQIVSGTPGRVNHMISEKHLNTRNIKQLILDEADEMLNRGFKDQVYSIYRYLPPTIQVVV 196

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  H+ +    K+M +P  +  +     L G+KQ              ++  EK+  
Sbjct: 197 VSATLPHEVIEITNKFMNNPFKVLVKRDELTLEGIKQF-------------FISIEKEQW 243

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  L       Q VIF N + + E + + + +ANF    + G   QK R   +  F
Sbjct: 244 KFDTLCDLYQSLIITQAVIFCNTKEKVEWLSKKMQDANFEVVKMHGEMSQKERNDIMQRF 303

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           +RG+ R+L++TDL  RG+D   V LV+N ++P+    Y+HR+GR+GRYG +G+ I  V
Sbjct: 304 RRGESRVLISTDLWGRGLDVQQVSLVVNYDLPNSRENYIHRIGRSGRYGRKGVAINFV 361


>gi|298708482|emb|CBJ30606.1| eukaryotic initiation factor 4A [Ectocarpus siliculosus]
          Length = 404

 Score =  208 bits (529), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 130/368 (35%), Positives = 196/368 (53%), Gaps = 23/368 (6%)

Query: 13  DVLSNIDVLFEN-DVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           D+ +N D   E  D + + + + +G+   GF K S IQ  A   +L G D I Q++SGTG
Sbjct: 21  DIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTG 80

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ 130
           K+  F V+ L K I +     Q ++LAPTRE+A QI  VVR++G  ++ L V   +GGT 
Sbjct: 81  KTATFAVSILQK-IDVAAADCQALVLAPTRELAQQIVKVVRALGDFMQ-LQVHACVGGTA 138

Query: 131 VERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
           V    R +Q    IVVG+PGR+  MI    L +D V LF++DEAD++++ GF + I  ++
Sbjct: 139 VRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVF 198

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPS 246
             LP   Q+ + SAT   D L    ++M +P+ I  +     L G+KQ            
Sbjct: 199 QYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIA-------- 250

Query: 247 LRYVDEEK----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              VD E+     L  L       Q +I+ N + R + + E +   +F    + G   Q 
Sbjct: 251 ---VDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQG 307

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G +
Sbjct: 308 ERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRK 367

Query: 363 GLVITIVS 370
           G+ I  V+
Sbjct: 368 GVAINFVT 375


>gi|254166522|ref|ZP_04873376.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
           T469]
 gi|289596178|ref|YP_003482874.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
           T469]
 gi|197624132|gb|EDY36693.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
           T469]
 gi|289533965|gb|ADD08312.1| DEAD/DEAH box helicase domain protein [Aciduliprofundum boonei
           T469]
          Length = 451

 Score =  207 bits (528), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 126/356 (35%), Positives = 202/356 (56%), Gaps = 27/356 (7%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I K  +  L+E+ FV+ + +Q  A P  + G D IVQSK+G+GK++ F++     L 
Sbjct: 8   DMSISKGTKNALKEHNFVEPTEVQEKAIPLAIKGRDLIVQSKTGSGKTLAFLIPIFENL- 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVG-AHVKNLHVDYFIGGTQVERP---KRPVQI 140
                  + I+L PTRE+A Q+  V RS+G AH K   V Y  GG  +ER     +   +
Sbjct: 67  ---NSGLEAIVLVPTRELAQQVERVARSIGKAHGKRTVVIY--GGAPMERQIAGLKGASM 121

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V+G+PGR+  +++  YLN++ +R F++DEAD++++ GF++DI WI  + P  KQM++ SA
Sbjct: 122 VIGTPGRVMDLMRRGYLNLNGIRFFVLDEADRMLDMGFIDDIKWILQKTPKDKQMMLFSA 181

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD--EEKKLVQ 258
           T   + ++  ++YM +P  I        +L   ++ A     +N +  YV+  E  K+ +
Sbjct: 182 TMPPEIISLARRYMKNPEKI--------ILSEDEITA-----ENVAQYYVEVGEINKIAK 228

Query: 259 LLSQ--TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
           L S   +   + +IF N + + + I E L    F A  L G   Q  R  ++D+FK+GK+
Sbjct: 229 LSSLLISERGKYLIFCNTRRKTKNIAEILQKYGFKAFALHGDMRQATRTRTMDAFKQGKI 288

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
            ILV+TD+AARGID   +  V+N ++P     Y+HR+GR GR    G  IT V+ E
Sbjct: 289 DILVSTDVAARGIDVHGITHVVNYDVPLYPKDYVHRIGRTGRMDAHGKAITFVTRE 344


>gi|162464317|ref|NP_001105848.1| putative RH2 protein [Zea mays]
 gi|84322402|gb|ABC55720.1| putative RH2 protein [Zea mays]
 gi|146217167|gb|ABQ10647.1| RNA helicase 2 [Zea mays]
 gi|194700534|gb|ACF84351.1| unknown [Zea mays]
 gi|413923950|gb|AFW63882.1| RNA helicase 2 [Zea mays]
          Length = 407

 Score =  207 bits (528), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 123/369 (33%), Positives = 206/369 (55%), Gaps = 24/369 (6%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+S+ D +   D L+     +G+   GF K S IQ  A   ++NG D I Q++SGTGK+
Sbjct: 31  EVVSSFDQMGIKDDLL-----RGIYGYGFEKPSAIQQRAVLPIINGRDVIAQAQSGTGKT 85

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV- 131
            + +   + +++   V++ Q +IL+PTRE+A Q   V+ ++G H+ N+ V   IGG  + 
Sbjct: 86  SM-ISLTVCQIVDTAVREVQALILSPTRELASQTERVMLAIGDHL-NVQVHACIGGKSIG 143

Query: 132 ---ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
               R +  V +V G+PGR+  MIK + L   +++L ++DEAD++++ GF + I  +Y  
Sbjct: 144 EDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDEADEMLSRGFKDQIYDVYRY 203

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q++++SAT  H+ L    K+M +P+ I  +     L G+KQ    + +       
Sbjct: 204 LPPELQVVLISATLPHEILEMTSKFMTEPVRILVKRDELTLEGIKQFFVAVEK------- 256

Query: 249 YVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              EE K   L  L       Q VIF N + + + + E + + NF    + G   Q+ R 
Sbjct: 257 ---EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQQERD 313

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
           A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ 
Sbjct: 314 AIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 373

Query: 366 ITIVSAESL 374
           I  V  + +
Sbjct: 374 INFVRKDDI 382


>gi|195542171|gb|ACF98296.1| eIF-4A [Cenchrus americanus]
          Length = 407

 Score =  207 bits (528), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 124/369 (33%), Positives = 206/369 (55%), Gaps = 24/369 (6%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+S+ D +   D L+     +G+   GF K S IQ  A   ++NG D I Q++SGTGKS
Sbjct: 31  EVVSSFDQMGIKDDLL-----RGIYGYGFEKPSAIQQRAVLPIINGRDVIAQAQSGTGKS 85

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV- 131
            + +   + +++   V++ Q +IL+PTRE+A Q   V+ +VG ++ N+ V   IGG  + 
Sbjct: 86  SM-ISLTVCQIVDTAVREVQALILSPTRELASQTEKVMLAVGDYL-NIQVHACIGGKSIS 143

Query: 132 ---ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
               R +  V +V G+PGR+  MIK + L   +++L ++DEAD++++ GF + I  +Y  
Sbjct: 144 EDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDEADEMLSRGFKDQIYDVYRY 203

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q++++SAT  H+ L    K+M +P+ I  +     L G+KQ    + +       
Sbjct: 204 LPPELQVVLISATLPHEILEMTSKFMTEPVRILVKRDELTLEGIKQFFVAVEK------- 256

Query: 249 YVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              EE K   L  L       Q VIF N + + + + E + + NF    + G   Q+ R 
Sbjct: 257 ---EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQQERD 313

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
           A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ 
Sbjct: 314 AIMTEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 373

Query: 366 ITIVSAESL 374
           I  V  + +
Sbjct: 374 INFVRKDDI 382


>gi|84998580|ref|XP_954011.1| eukaryotic translation initiation factor [Theileria annulata]
 gi|65305009|emb|CAI73334.1| eukaryotic translation initiation factor, putative [Theileria
           annulata]
          Length = 394

 Score =  207 bits (528), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 201/358 (56%), Gaps = 26/358 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE D+ +++ I +G+   GF K S +Q  A   +L G D I+QS+SGTGK+ VF + AL 
Sbjct: 23  FE-DLGLKEEILKGIFAYGFDKPSAVQQRAIKPILEGRDVIIQSQSGTGKTCVFCLGALQ 81

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP---- 137
             +   V++ Q ++L+PTRE+A Q   V  ++G +  N+ V   IGG +V    +     
Sbjct: 82  T-VNSNVRETQVLLLSPTRELAEQSQKVCLALGDYC-NVEVHCCIGGKKVSDDIKALESG 139

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQIV G+PGR+  MI  ++LN  +++  I+DEAD+++N GF E +  +Y  LPP  Q+++
Sbjct: 140 VQIVSGTPGRVNHMITDRHLNTRNIKQLILDEADEMLNRGFKEQVYSVYRYLPPTIQVVL 199

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  HD +    K+M +P  +  +     L G+KQ              ++  EK+  
Sbjct: 200 VSATLPHDVIEITNKFMNNPFKVLVKRDELTLEGIKQF-------------FISVEKEQW 246

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  L       Q VIF N + + + + + + +ANF    + G   QK R   +  F
Sbjct: 247 KFDTLCDLYESLIITQAVIFCNTKEKVDWLAKKMKDANFEVSKMHGEMSQKERNDIMQRF 306

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           ++G+ R+L++TDL  RG+D   V LV+N ++P+   +Y+HR+GR+GRYG +G+ I  V
Sbjct: 307 RKGESRVLISTDLWGRGLDVQQVSLVVNYDLPNSRESYIHRIGRSGRYGRKGVAINFV 364


>gi|2370593|emb|CAA73168.1| translation initiation factor eIF4A II [Xenopus laevis]
          Length = 413

 Score =  207 bits (528), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 125/364 (34%), Positives = 208/364 (57%), Gaps = 33/364 (9%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + + + +G+   GF K S IQ  A    + GYD I Q++SGTGK+  F ++ L + 
Sbjct: 41  DDMSLSESLLRGIYAYGFEKPSAIQQRAIMPCIKGYDVIAQAQSGTGKTATFAISILQQ- 99

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHV-KNLHVDYFIGGTQVERPKRPVQ--- 139
           I+L ++  Q ++LAPTRE+A QI  VV ++G ++  + H    IGGT V    + +Q   
Sbjct: 100 IELDMKATQALMLAPTRELAQQIQKVVMALGDYMGASCHA--CIGGTNVRAEVQKLQSEA 157

Query: 140 --IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMK-QML 196
             I+VG+PGR+  M+  +YL+   +++F++DEAD++++ GF + I  I+ ++  M  Q++
Sbjct: 158 PHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKVLSMNAQVV 217

Query: 197 VVSATYSHDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
           ++SAT   D L   +K+M DP+  L++ E+ T  L G++Q              Y++ E+
Sbjct: 218 LLSATMPADVLEVTKKFMRDPIRILVKKEELT--LEGIRQF-------------YINVER 262

Query: 255 K------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           +      L  L       Q VIF N + + + + E +   +F    L G  DQK R   +
Sbjct: 263 EEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIM 322

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I +
Sbjct: 323 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGWKGVAINM 382

Query: 369 VSAE 372
           V+ +
Sbjct: 383 VTED 386


>gi|413939599|gb|AFW74150.1| hypothetical protein ZEAMMB73_472755 [Zea mays]
 gi|413939600|gb|AFW74151.1| hypothetical protein ZEAMMB73_472755 [Zea mays]
          Length = 407

 Score =  207 bits (527), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 123/369 (33%), Positives = 205/369 (55%), Gaps = 24/369 (6%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+S+ D +   D L+     +G+   GF K S IQ  A   ++NG D I Q++SGTGK+
Sbjct: 31  EVVSSFDQMGIKDDLL-----RGIYGYGFEKPSAIQQRAVLPIINGRDVIAQAQSGTGKT 85

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV- 131
            + +   + +++   V++ Q +IL+PTRE+A Q   V+ ++G H+ N+ V   IGG  + 
Sbjct: 86  SM-ISLTVCQIVDTAVREVQALILSPTRELASQTERVMLAIGDHL-NVQVHACIGGKSIG 143

Query: 132 ---ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
               R +  V +V G+PGR+  MIK + L   +++L ++DEAD++++ GF + I  +Y  
Sbjct: 144 EDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDEADEMLSRGFKDQIYDVYRY 203

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q++++SAT  H+ L    K+M +P+ I  +     L G+KQ    + +       
Sbjct: 204 LPPELQVVLISATLPHEILEMTSKFMTEPVRILVKRDELTLEGIKQFFVAVEK------- 256

Query: 249 YVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              EE K   L  L       Q VIF N + + + + E +   NF    + G   Q+ R 
Sbjct: 257 ---EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRTNNFTVSAMHGDMPQQERD 313

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
           A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ 
Sbjct: 314 AIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 373

Query: 366 ITIVSAESL 374
           I  V  + +
Sbjct: 374 INFVRKDDI 382


>gi|323305660|gb|EGA59400.1| Dhh1p [Saccharomyces cerevisiae FostersB]
          Length = 506

 Score =  207 bits (527), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 135/388 (34%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 36  QTDDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGT 94

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 95  GKTAAFVIPTLEK-VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 152

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V I+VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 153 NLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQI 212

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
            S LPP  Q L+ SAT+       + K+   P  I   E+ T  L G+ Q  A       
Sbjct: 213 LSFLPPTHQSLLFSATFPLTVKEFMVKHQHKPYEINLMEELT--LKGITQYYA------- 263

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 264 ----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 319

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 320 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 379

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 380 LGLAINLINWNDRFNLYKIEQELGTEIA 407


>gi|441503307|ref|ZP_20985314.1| Cold-shock DEAD-box protein A [Photobacterium sp. AK15]
 gi|441429523|gb|ELR66978.1| Cold-shock DEAD-box protein A [Photobacterium sp. AK15]
          Length = 625

 Score =  207 bits (527), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 132/412 (32%), Positives = 216/412 (52%), Gaps = 22/412 (5%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I   L   GFV  +PIQ A+ P +L G DA+ ++++GTGK+  F +  LNKL  L   +P
Sbjct: 17  ILSALDTMGFVSPTPIQAASIPLLLTGTDALGKAQTGTGKTAAFSLPLLNKL-DLGQYKP 75

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    IVVG+PGR
Sbjct: 76  QAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASIVDQMRALKSGAHIVVGTPGR 135

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +K +I    L++D V  F++DEAD+++  GFV+D+TWI  Q P   Q ++ SAT      
Sbjct: 136 VKDLITRDRLHLDEVHTFVLDEADEMLKMGFVDDVTWIMEQAPETAQRVLFSATMPPMVK 195

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
             + +++ DP  I      R +  V+Q   ++        + V++++ +++LL     + 
Sbjct: 196 EIVDRFLRDPARIDVAGENRTVSQVEQQFWVV--------KGVEKDEAMMRLLETEGTDA 247

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            ++F   +   E + + L+   F A  L G   Q  R  +++  KRG + ILV TD+ AR
Sbjct: 248 SIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVEHIKRGVIDILVATDVVAR 307

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL------- 380
           G+D   +  V N +IP D  +Y+HR+GR GR G  G  I +V    +    ++       
Sbjct: 308 GLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRNGKAILLVRTNQIRMLRTIERVTKSR 367

Query: 381 MGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLA--KPLDQAQEREDVEQT 430
           M EI L     V     N  G ++   +   +L A  + +D+ QE  +V+ T
Sbjct: 368 MEEIQLPLRDVVAEARLNRLGQELAAQKEEASLEAFVELVDKLQETIEVDAT 419


>gi|357017209|gb|AET50633.1| hypothetical protein [Eimeria tenella]
          Length = 406

 Score =  207 bits (527), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 128/379 (33%), Positives = 207/379 (54%), Gaps = 22/379 (5%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+S+ D L  N+ L+     +G+   GF K S IQM     +++G+D I Q++SGTGK+
Sbjct: 31  EVVSSFDSLPLNEKLL-----RGIYSYGFEKPSAIQMRGIKPIIDGHDTIGQAQSGTGKT 85

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV- 131
             FV+AAL K I       Q +ILAPTRE+A QI  V  ++G ++ N+     +GGT V 
Sbjct: 86  ATFVIAALQK-IDYDKPACQVLILAPTRELAQQIQKVALALGDYL-NVLCHACVGGTSVR 143

Query: 132 ---ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
              +R    V +VVG+PGR+  M++ ++L  + ++LF++DEAD++++ GF   I  ++  
Sbjct: 144 EDAQRLHGGVHVVVGTPGRVNDMLEKRHLRCEQMQLFVLDEADEMLSRGFKAQILAVFQH 203

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPS 246
           LP   Q+ + SAT   D L    ++M  P  +L++ ++ T  L G+ Q    +   +N  
Sbjct: 204 LPQDVQVALFSATVPADILELTTQFMRKPKRILVKKDELT--LEGIAQYFIDVQREEN-- 259

Query: 247 LRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLA 306
                +   LV L       Q +I+ N + +   + E +   +F    + G  +Q+ R  
Sbjct: 260 -----KFDTLVDLYETLTITQAIIYCNTRRKVLQLVEMMTGHDFTVSAMHGDMEQQQRET 314

Query: 307 SLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVI 366
            L  F+ G  R+L+TTDL ARGID   V LVIN +IP     Y+HR+GR+GR+G +G+ I
Sbjct: 315 VLREFRSGSTRVLITTDLLARGIDVQQVSLVINYDIPTSKENYIHRIGRSGRFGRKGIAI 374

Query: 367 TIVSAESLVKFHSLMGEIN 385
             V+A  + +   +    N
Sbjct: 375 NFVTAADMEQLKDIETHYN 393


>gi|406037586|ref|ZP_11044950.1| ATP-dependent RNA helicase RhlB [Acinetobacter parvus DSM 16617 =
           CIP 108168]
          Length = 383

 Score =  207 bits (527), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 113/354 (31%), Positives = 202/354 (57%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQ-- 89
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  P+Q  
Sbjct: 14  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPIQDQ 73

Query: 90  ----QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
               +P+ +ILAPTRE+A+QI    +++     NLHV   +GG   ++ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAQAL-TKFSNLHVVTLLGGVDFDKQKKMLDKNFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 133 IVATPGRLIDFVEQKEVWLDKIEFLVIDEADRLLDMGFIPSVKRIVRYSSFKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+++  E   +  + V+Q V ++ +         D+ K L +
Sbjct: 193 SATFSYDVLNLARQWLFEPVMVEIEPEQKTNVDVEQRVYMVEK--------KDKYKLLQE 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L   P ++ +IF+N + +   + ++L    +    LSG   Q  RL  LD FK+GK  I
Sbjct: 245 ILRDEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  VIN  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|344305098|gb|EGW35330.1| ATP-dependent RNA helicase [Spathaspora passalidarum NRRL Y-27907]
          Length = 400

 Score =  207 bits (527), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 200/362 (55%), Gaps = 21/362 (5%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I    
Sbjct: 34  KPDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGML-QVIDTKS 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ-----IVVG 143
              Q +IL+PTRE+AVQI +VV+ +G ++ N+H    IGG  V +  + +Q     IV G
Sbjct: 93  HDCQALILSPTRELAVQIENVVKHLGDYM-NIHTHALIGGINVGQDVKKLQTSQPQIVSG 151

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  ++K + L+   +++ I+DEAD+L   GF E I  IY QLPP  Q++VVSAT S
Sbjct: 152 TPGRVLDVLKRRNLSPRHIKILILDEADELFTKGFKEQIYEIYKQLPPGAQVVVVSATLS 211

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
            + L    K+  DP+ I  +     L G+KQ      +C+    ++      L  L    
Sbjct: 212 PEVLEMTNKFTTDPVKILVKRDEISLSGIKQYYV---QCEKEEWKF----DTLCDLYDNL 264

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF N +L+   + E +   NF    + G   Q  R + ++ F+ G  R+L++TD
Sbjct: 265 TITQAVIFCNTKLKVNWLVEQMRKQNFTVVGMHGDMKQDERDSIMNDFRTGNSRVLISTD 324

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA------ESLVKF 377
           + ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G  I +++       + L KF
Sbjct: 325 VWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKADVQTQKELEKF 384

Query: 378 HS 379
           +S
Sbjct: 385 YS 386


>gi|291614701|ref|YP_003524858.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
           ES-1]
 gi|291584813|gb|ADE12471.1| DEAD/DEAH box helicase domain protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 450

 Score =  207 bits (527), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 122/359 (33%), Positives = 198/359 (55%), Gaps = 20/359 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  PI + L E G+V  +PIQ  A P  L G+D +  +++GTGK+  F +  L KL+
Sbjct: 8   DLKLAPPILKALTEAGYVTPTPIQAQAIPLALEGHDLMAGAQTGTGKTAAFALPMLQKLL 67

Query: 85  ------KLPVQQP-QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVER 133
                   P + P + +IL PTRE+AVQ+ + V++   H  NL      GG    TQ   
Sbjct: 68  PHASASTSPAKHPVRALILVPTRELAVQVEESVKAYAKHT-NLRSLVVYGGVDIKTQTPH 126

Query: 134 PKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMK 193
            K  V+I+V +PGR+   I+ K + ++ V++ ++DEAD++++ GF+  +  I + LP  +
Sbjct: 127 LKTGVEILVATPGRLLDHIEQKTVLLNQVQMLVLDEADRMLDMGFMPALKRILALLPRQR 186

Query: 194 QMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEE 253
           Q L+ SAT+S++     + +M  P LI    +      + Q V L+ +     L      
Sbjct: 187 QSLMFSATFSNEIKKLSEDFMNYPTLIEVARSNASAENITQKVYLVEQSGKHQL------ 240

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L QLL      Q ++F+  +L    + + L      A+ + G + Q  R+ +LD+FK+
Sbjct: 241 --LAQLLRGDDAKQVIVFTKTKLTASRLAKQLQREGVSADAIHGDKSQLERMQALDAFKQ 298

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           G+V +L+ TD+AARG+D  ++ +VIN EIPH A  Y+HR+GR GR G  G  I++VS E
Sbjct: 299 GRVAVLIATDVAARGLDIDSLPMVINYEIPHAAEDYVHRIGRTGRAGASGTAISLVSPE 357


>gi|444321280|ref|XP_004181296.1| hypothetical protein TBLA_0F02360 [Tetrapisispora blattae CBS 6284]
 gi|387514340|emb|CCH61777.1| hypothetical protein TBLA_0F02360 [Tetrapisispora blattae CBS 6284]
          Length = 585

 Score =  207 bits (527), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 129/387 (33%), Positives = 202/387 (52%), Gaps = 22/387 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  + G D + ++K+GT
Sbjct: 27  QTEDVLNTKGNSFE-DFYLKRELLMGIFEAGFEKPSPIQEESIPIAIAGRDILARAKNGT 85

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 86  GKTAAFVIPTLEK-VKPKINKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 143

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    + ++VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 144 NLRDDIMRLNETIHVLVGTPGRVLDLASRKVADLSECSLFIMDEADKMLSRDFKTIIEQI 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP   Q L+ SAT+       + K++  P  I   D    L G+ Q  A        
Sbjct: 204 LIFLPKHHQSLLFSATFPLTVKEFMVKHLTKPYEINLMDEL-TLKGITQYYA-------- 254

Query: 246 SLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q+
Sbjct: 255 ---FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQ 311

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 312 ERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 371

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHA 389
           GL I +++       + +  E+  + A
Sbjct: 372 GLAINLINWNDRFNLYKIEQELGTEIA 398


>gi|452990332|emb|CCQ98554.1| putative ATP-dependent RNA helicase [Clostridium ultunense Esp]
          Length = 535

 Score =  207 bits (527), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 124/377 (32%), Positives = 209/377 (55%), Gaps = 23/377 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I++ I + +QE GF + SPIQ A  P +L G+D I Q+++GTGK+  F +  + K+   P
Sbjct: 20  IDQAILKAIQEMGFEEPSPIQSACIPKILEGFDVIGQAQTGTGKTAAFGIPIVEKVTSSP 79

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQIVVGS 144
             + Q ++L PTRE+A+QI+  +R +    +   +  + G   G Q+   K+ VQ+V+G+
Sbjct: 80  --EVQALVLTPTRELAIQISGELRKISKFKRIKTLPIYGGQSIGHQIRALKQGVQVVIGT 137

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGRI   +  K L +D VR+ ++DEAD++++ GF++DI  I   +P  +Q L+ SAT   
Sbjct: 138 PGRIIDHLNRKTLKLDHVRIVVLDEADEMLDMGFIDDIESILRSVPADRQTLLFSATMPA 197

Query: 205 DNLATLQKYMVDPLLIR--PEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQ 262
           +  +   +YM DP  +R   E+   PL  ++Q+   + E KN       +   L ++L  
Sbjct: 198 EIRSLANRYMKDPQTVRVNREEVAAPL--IEQVYYKVLE-KN-------KLDSLCRVLDS 247

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
                 +IF   +   + + E+L    + A+ L G   Q  R   +  F+  ++ +L+ T
Sbjct: 248 EEVELGIIFCRTKKGVDELTESLQARGYLADGLHGDLSQAQRDKVMGDFRTNRIELLIAT 307

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+AARGID +NV  VIN +IP D  +Y+HR+GR GR G RG+ IT+V+   + +  +   
Sbjct: 308 DVAARGIDVSNVSHVINYDIPQDPESYVHRIGRTGRAGKRGIAITLVTPREMKQLKA--- 364

Query: 383 EINLDHAFNVGLVPDNL 399
              ++H    G+ P +L
Sbjct: 365 ---IEHMIKTGITPRSL 378


>gi|401626458|gb|EJS44404.1| dhh1p [Saccharomyces arboricola H-6]
          Length = 507

 Score =  207 bits (526), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 134/388 (34%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 36  QTDDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGT 94

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 95  GKTAAFVIPTLEK-VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 152

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V I+VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 153 NLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQI 212

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
            S LP   Q L+ SAT+       + K++  P  I   E+ T  L G+ Q  A       
Sbjct: 213 LSFLPSTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELT--LKGITQYYA------- 263

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 264 ----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 319

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 320 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 379

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 380 LGLAINLINWNDRFNLYKIEQELGTEIA 407


>gi|269468408|gb|EEZ80073.1| hypothetical protein Sup05_1317 [uncultured SUP05 cluster
           bacterium]
          Length = 614

 Score =  207 bits (526), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 191/345 (55%), Gaps = 16/345 (4%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I + L   G+   SPIQ     ++LNG D I Q+++GTGK+  F +  L+  I L +  P
Sbjct: 23  ILKVLDSIGYETPSPIQEQCITHLLNGEDIIGQAQTGTGKTAAFALPLLDN-IDLSLNAP 81

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVGSPGR 147
           Q +ILAPTRE+A+Q+++ V+     +K  HV    GG     Q+   KR V  VVG+PGR
Sbjct: 82  QLLILAPTRELAIQVSEAVQVYARGLKGFHVLPIYGGQSYDIQLRPLKRGVHCVVGTPGR 141

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   IK   L +D ++ F++DEAD+++  GF++DI W+  ++P  +Q+ + SAT  +   
Sbjct: 142 VMDHIKKGTLKLDQLKSFVLDEADEMLKMGFIDDIKWVMERIPEQRQIALFSATMPNIIK 201

Query: 208 ATLQKYMVDPLLIRPEDATR--PLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPF 265
              +K++ +P +++ +  T   P +G K        C    L    +   L ++L  T F
Sbjct: 202 RVAEKFLNNPKIVKVKTKTETAPTIGQKY-------CLVGGLS--QKLDALTRILEVTEF 252

Query: 266 NQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLA 325
           +  +IF+  +     + E L+   F AE ++G   Q  R   ++ FK+G + ILV TD+A
Sbjct: 253 DAMIIFARTKTLTIELSEKLSARGFSAEAINGDIQQSQREKIINKFKKGGIDILVATDVA 312

Query: 326 ARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           ARG+D   +  V+N +IP DA TY+HR+GR GR G  G  I  VS
Sbjct: 313 ARGLDVPRISHVVNYDIPQDAETYVHRIGRTGRAGREGEAILFVS 357


>gi|118574850|gb|ABL07003.1| DH [Medicago sativa]
          Length = 406

 Score =  207 bits (526), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 123/383 (32%), Positives = 205/383 (53%), Gaps = 30/383 (7%)

Query: 10  RTKDVLSNIDVLFEN-----------DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNG 58
           R + V +N D+ FE            ++ I+  + +G+   GF K S IQ  A   ++ G
Sbjct: 11  RRRTVTANEDMDFETTEGVKAIGSFEEMGIKDDLLRGIYNYGFEKPSAIQQRAVAPIIQG 70

Query: 59  YDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVK 118
            D I Q++SGTGK+   +   + +++   V++ Q +I++PTRE+A Q   V+ ++G ++ 
Sbjct: 71  RDVIAQAQSGTGKT-SMIALTVCQVVDTSVREVQALIVSPTRELASQTEKVILAIGDYI- 128

Query: 119 NLHVDYFIGGTQVERPKRP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI 174
           N+     IGG  V    R     V +V G+PGR+  MIK + L   +++L ++DE+D+++
Sbjct: 129 NIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEML 188

Query: 175 NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ 234
           + GF + I  +Y  LPP  Q+ ++SAT  H+ L    K+M DP+ I  +     L G+KQ
Sbjct: 189 SRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQ 248

Query: 235 LVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFG 291
               +            EE K   L  L       Q VIF N + + + + E + N NF 
Sbjct: 249 FFVAVER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFT 298

Query: 292 AEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLH 351
              + G   Q+ R A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+H
Sbjct: 299 VSSMHGDMPQRERDAIMSEFRVGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIH 358

Query: 352 RMGRAGRYGTRGLVITIVSAESL 374
           R+GR+GR+G +G+ I  V ++ +
Sbjct: 359 RIGRSGRFGRKGVAINFVKSDDI 381


>gi|56756857|gb|AAW26600.1| SJCHGC06283 protein [Schistosoma japonicum]
          Length = 402

 Score =  207 bits (526), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 121/366 (33%), Positives = 200/366 (54%), Gaps = 20/366 (5%)

Query: 17  NIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           NI+V+   D + +   + +G+   GF + S IQ  A   ++ G D I Q++SGTGK+   
Sbjct: 24  NIEVIPSFDSMCLRDDLLRGIYAYGFERPSAIQQRAIKQIIKGRDVIAQAQSGTGKTATL 83

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK 135
            ++ L +++   +++ Q ++L+PTRE+A QI  V+ ++G +  N+H     GGT +    
Sbjct: 84  GISIL-QMLDTQLRETQALVLSPTRELASQIQKVILALGDYT-NVHCHACYGGTNIGEDI 141

Query: 136 RPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           R +     ++ G+PGR+  MI+ + L   +V+LF++DEAD++++ GF E I  +Y  LPP
Sbjct: 142 RKLDYGQHVISGTPGRVFDMIRRRSLRTRAVKLFVLDEADEMLDKGFKEQIYDVYRYLPP 201

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
             Q++++SAT  H+ L    K+M +P+ I  +     L G+KQ    +            
Sbjct: 202 GTQVVLLSATMPHEILEMTSKFMTNPVRILVKRDELTLEGIKQFFVAVER---------- 251

Query: 252 EEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           EE K   L  L       Q VIF N + +   + E +   NF    + G   QK R   +
Sbjct: 252 EEWKFDTLCDLYDTLTVTQSVIFCNTKRKVAWLTEKMLKNNFTVASMHGDMVQKEREKIM 311

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G  R+L+TTDL ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  
Sbjct: 312 KDFRAGDSRVLITTDLWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF 371

Query: 369 VSAESL 374
           V  + +
Sbjct: 372 VKTDDI 377


>gi|345876610|ref|ZP_08828376.1| thioesterase superfamily protein [endosymbiont of Riftia pachyptila
           (vent Ph05)]
 gi|344226322|gb|EGV52659.1| thioesterase superfamily protein [endosymbiont of Riftia pachyptila
           (vent Ph05)]
          Length = 628

 Score =  207 bits (526), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 196/347 (56%), Gaps = 13/347 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +PI Q L + G+   SPIQ A+ P +L G D + Q+++GTGK+  F +  L++ I L 
Sbjct: 18  LSEPIMQALADVGYESPSPIQQASIPPLLEGKDLLGQAQTGTGKTAAFALPLLSR-IDLS 76

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
            + PQ ++LAPTRE+A+Q+ + ++S   H+K  HV    GG     Q+ + +R VQ+VVG
Sbjct: 77  RKTPQFLVLAPTRELAIQVAEAMQSYARHIKGFHVLPIYGGQPYDHQLRQLRRGVQVVVG 136

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   I+   L +D++   ++DEAD+++  GF++D+ WI  Q P  +Q+ + SAT  
Sbjct: 137 TPGRVMDHIRRGTLKLDNLDALVLDEADEMLRMGFIDDVEWILEQTPQTRQIALFSATMP 196

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                  Q+++ DP  I+    T     ++Q    +       L  +D    L ++L   
Sbjct: 197 SIIRKVAQRHLNDPTEIKIAAKTSTATTIRQRYWQVS-----GLHKLD---ALTRILECE 248

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
            F+  ++F   ++    + E L    + +E L+G   QK R  +++ FK G++ ILV TD
Sbjct: 249 SFDAMLVFVRTKIATVELAEKLEARGYASEALNGDIPQKQRERTVERFKAGRLDILVATD 308

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   +  VIN +IP+D  +Y+HR+GR GR G  G  I  VS
Sbjct: 309 VAARGLDVERISHVINYDIPYDTESYVHRIGRTGRAGRTGDAILFVS 355


>gi|388500968|gb|AFK38550.1| unknown [Medicago truncatula]
          Length = 406

 Score =  207 bits (526), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 123/383 (32%), Positives = 205/383 (53%), Gaps = 30/383 (7%)

Query: 10  RTKDVLSNIDVLFEN-----------DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNG 58
           R + V +N D+ FE            ++ I+  + +G+ + GF K S IQ  A   ++ G
Sbjct: 11  RRRTVTANEDMDFETTEGVKAIGSFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVAPIIQG 70

Query: 59  YDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVK 118
            D I Q++SGTGK+   +   + +++   V++ Q +I++PTRE+A Q   V+ ++G  + 
Sbjct: 71  RDVIAQAQSGTGKT-SMIALTVCQVVDTSVREVQALIVSPTRELASQTEKVILTIGDFI- 128

Query: 119 NLHVDYFIGGTQVERPKRP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI 174
           N+     IGG  V    R     V +V G+PGR+  MIK + L   +++L ++DE+D+++
Sbjct: 129 NIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEML 188

Query: 175 NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ 234
           + GF + I  +Y  LPP  Q+ ++SAT  H+ L    K+M DP+ I  +     L G+KQ
Sbjct: 189 SRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQ 248

Query: 235 LVALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFG 291
               +            EE K   L  L       Q VIF N + + + + E + N NF 
Sbjct: 249 FFVAVER----------EEWKFDTLCDLYDTLTITQAVIFRNTKRKVDWLTEKMRNNNFT 298

Query: 292 AEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLH 351
              + G   Q+ R A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+H
Sbjct: 299 VSAMHGDMPQRERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIH 358

Query: 352 RMGRAGRYGTRGLVITIVSAESL 374
           R+GR+GR+G +G+ I  V ++ +
Sbjct: 359 RIGRSGRFGRKGVAINFVKSDDI 381


>gi|317159565|gb|ADV04057.1| DEAD box RNA helicase RH2a [Hevea brasiliensis]
          Length = 373

 Score =  207 bits (526), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 118/354 (33%), Positives = 195/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+ + +   + +L+   
Sbjct: 7   IKNDLLRGIYAYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSM-IALTVCQLVDTS 65

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G ++ N+     IGG  V    R     V +V G
Sbjct: 66  SREVQALILSPTRELAAQTEKVILAIGDYI-NIQAHACIGGKSVGEDIRKLEFGVHVVSG 124

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   ++RL ++DE+D++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 125 TPGRVCDMIKRRTLRTRAIRLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 184

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 185 NEILEMTSKFMTDPVKILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 234

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + + NF    + G   QK R A +  F+ G  R+L+
Sbjct: 235 DTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERDAIMSEFRSGTTRVLI 294

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 295 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 348


>gi|149244712|ref|XP_001526899.1| eukaryotic initiation factor 4A-12 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|152032453|sp|A5DWJ1.1|FAL1_LODEL RecName: Full=ATP-dependent RNA helicase FAL1
 gi|146449293|gb|EDK43549.1| eukaryotic initiation factor 4A-12 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 399

 Score =  206 bits (525), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/356 (33%), Positives = 201/356 (56%), Gaps = 14/356 (3%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L +++    
Sbjct: 34  KPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML-EVLDSKS 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVGS 144
           ++ Q ++L+PTRE+A QI +V++ +G ++ N+     IGG    T ++R ++  QIV G+
Sbjct: 93  KECQALVLSPTRELATQIQNVIKHLGDYM-NIQTYACIGGKNVGTDIKRLQQGQQIVSGT 151

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  +IK + L+   +++ I+DEAD+L   GF E I  IY  LPP  Q++VVSAT +H
Sbjct: 152 PGRVLDVIKRRNLSTRHIKMLILDEADELFTKGFKEQIYEIYKHLPPGVQVVVVSATLTH 211

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
           + L    K+  DP+ I  +     L G+KQ      +C+    ++      L  L     
Sbjct: 212 EVLEMTGKFTTDPVKILVKREEVSLSGIKQYYI---QCEKEDWKF----DTLCDLYDNLT 264

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N +++   + + +   NF    + G   Q+ R A ++ F+ G  R+L++TD+
Sbjct: 265 ITQAVIFCNTKIKVNWLTDQMRKQNFTVVAMHGDMKQEERDAIMNDFRSGNSRVLISTDV 324

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            ARGID   + LVIN ++P D   Y+HR+GR+GR+G +G  I +++    ++  +L
Sbjct: 325 WARGIDVQQISLVINYDLPLDKENYIHRIGRSGRFGRKGTAINLLTKSDTIELKAL 380


>gi|308810286|ref|XP_003082452.1| putative nicotiana eukaryotic (ISS) [Ostreococcus tauri]
 gi|116060920|emb|CAL57398.1| putative nicotiana eukaryotic (ISS) [Ostreococcus tauri]
          Length = 404

 Score =  206 bits (525), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 124/354 (35%), Positives = 191/354 (53%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +GL   GF K S IQ  A   +++G D I Q++SGTGK+   +  AL +++   
Sbjct: 38  IREDLLRGLYSYGFEKPSAIQQRAVVPIISGRDVIAQAQSGTGKT-SMISLALCQMLDTT 96

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
            ++ Q ++L+PTRE+AVQ      ++G +  N+ V   IGG  +    R +     IV G
Sbjct: 97  SREVQGLVLSPTRELAVQTEKTALALG-NFMNVQVHACIGGRSIGEDIRKLDYGCHIVSG 155

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L    +++ ++DEAD+++N GF E I  +Y  LPP  Q+++VSAT  
Sbjct: 156 TPGRVFDMIKRRNLRTRGIKILVLDEADEMLNKGFKEQIYDVYRYLPPETQVVLVSATLP 215

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DPL I  +     L G+KQ    +            EE K   L  L 
Sbjct: 216 NEVLEMTGKFMTDPLRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 265

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +   NF    + G   QK R   ++ F+ G  R+L+
Sbjct: 266 DTLTITQAVIFCNTKKKVDWLTEKMRQNNFTVSAMHGDMPQKEREEIMNEFRGGTTRVLI 325

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GRYG +G+ I  V  E +
Sbjct: 326 TTDMWARGIDVQQVSLVINYDLPGNRENYIHRIGRSGRYGRKGVAINFVKEEDV 379


>gi|303271803|ref|XP_003055263.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463237|gb|EEH60515.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 394

 Score =  206 bits (525), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 126/354 (35%), Positives = 193/354 (54%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +GL   GF K S IQ  A   + +G D I Q++SGTGKS + +  AL +++   
Sbjct: 28  IREDLLRGLYSYGFEKPSAIQQRAVMPICSGRDVIAQAQSGTGKSSM-ISLALCQMLDTS 86

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q ++L+PTRE+A Q   V  ++G +  ++ V   IGG  +    R     V IV G
Sbjct: 87  TREVQALVLSPTRELATQTEKVALALG-NFMSVQVHACIGGRSIGEDIRKLDHGVHIVSG 145

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++  I+DEAD+++N GF E I  +Y  LPP  Q+++VSAT  
Sbjct: 146 TPGRVFDMIKRRNLRTRNIKTLILDEADEMLNKGFKEQIYDVYRYLPPETQVVLVSATLP 205

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            + L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 206 VEVLEMTTKFMTDPIRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 255

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +   NF    + G   QK R A +  F+ G  R+L+
Sbjct: 256 DTLTITQAVIFCNTKRKVDWLTEKMRANNFTVSAMHGDMPQKERDAIMGEFRGGTTRVLI 315

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GRYG +G+ I  V A+ +
Sbjct: 316 TTDVWARGIDVQQVSLVINYDLPNNRENYIHRIGRSGRYGRKGVAINFVKADDV 369


>gi|50305963|ref|XP_452942.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74660551|sp|Q6CSZ7.1|DHH1_KLULA RecName: Full=ATP-dependent RNA helicase DHH1
 gi|49642075|emb|CAH01793.1| KLLA0C16599p [Kluyveromyces lactis]
          Length = 514

 Score =  206 bits (525), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 133/387 (34%), Positives = 204/387 (52%), Gaps = 22/387 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 26  QTDDVLNTKGRSFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGT 84

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 85  GKTAAFVIPTLEK-VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 142

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R   PV I+VG+PGR+  +   +  ++    LFIMDEADK+++  F      I
Sbjct: 143 NLRDDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKMLSRDFKVLAEQI 202

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+       + K++ +P  I   D    L G+ Q  A        
Sbjct: 203 LGFLPERRQLLLFSATFPVTVKEFMVKHLKNPHEINLMDEL-TLKGISQFYA-------- 253

Query: 246 SLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +    F   Y      Q 
Sbjct: 254 ---FVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITELGFSCYYSHARMKQS 310

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 311 ERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 370

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHA 389
           GL I +++       + +  E+N + A
Sbjct: 371 GLAINLINWNDRFNLYKIEQELNTEIA 397


>gi|414155170|ref|ZP_11411485.1| DEAD-box ATP-dependent RNA helicase CshA [Desulfotomaculum
           hydrothermale Lam5 = DSM 18033]
 gi|411453220|emb|CCO09389.1| DEAD-box ATP-dependent RNA helicase CshA [Desulfotomaculum
           hydrothermale Lam5 = DSM 18033]
          Length = 532

 Score =  206 bits (525), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 121/350 (34%), Positives = 193/350 (55%), Gaps = 14/350 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           +++I K I  GL E GF + +PIQ  A P+VL G+D I Q+++GTGK+  F +  L + I
Sbjct: 12  ELVINKKIVDGLVEMGFEEPTPIQQLAIPHVLAGHDVIGQAQTGTGKTAAFSIPLLEQ-I 70

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQI 140
               +  Q++I+ PTRE+A+Q+ + +  +G   + + V    GG  +ER  R     VQ+
Sbjct: 71  DFRKKVLQSLIITPTRELAIQVAEEISKIGRFCR-VKVLPIYGGQSIERQIRSLRQGVQV 129

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++   L  D VRL ++DEAD++++ GF+EDI  I   +P  +Q L+ SA
Sbjct: 130 VVGTPGRLLDHLRRHTLKTDQVRLVVLDEADEMLDMGFIEDIEEILKHIPAERQTLLFSA 189

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T   + +   Q+YM +P  +    +T     + Q+   +PE          + + L +LL
Sbjct: 190 TMPAEIVRLAQQYMKNPQYVTVSKSTLTAPQIDQVYYEVPE--------KHKLEALCRLL 241

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
             T   Q ++F   +   + +   L    + A  L G   Q+ R   +  F+ G+V +LV
Sbjct: 242 DTTDIAQGIVFCRTKRGVDELVAGLQARGYTAAALHGDLSQQQRNNVMRQFRSGEVELLV 301

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            TD+AARG+D   V  VIN +IP D   Y+HR+GR GR G  G+ ITI++
Sbjct: 302 ATDVAARGLDIEGVSHVINYDIPQDPEFYVHRIGRTGRAGRSGVAITIIN 351


>gi|365540016|ref|ZP_09365191.1| ATP-dependent RNA helicase [Vibrio ordalii ATCC 33509]
          Length = 674

 Score =  206 bits (525), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 121/355 (34%), Positives = 197/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ + + I   L E GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SELALNESILSALNEMGFVSPTPIQAAAIPFLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G  ++ L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQKIQGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFVLDEADEMLKMGFVDDVTWIMEQAPGTAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        + +Y+ DP       A   + G  Q VA + E +   ++ V++++ +  L
Sbjct: 188 ATMPPMVKTIVDRYLRDP-------ARVDVAGSNQTVAKV-EQQYWVVKGVEKDEAMALL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L +  F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLLSRGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|320589959|gb|EFX02415.1| eukaryotic initiation factor 4a-12 [Grosmannia clavigera kw1407]
          Length = 403

 Score =  206 bits (525), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 212/385 (55%), Gaps = 24/385 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   G+   S +Q  A   V  G D I Q++SGTGK+  F ++ L 
Sbjct: 31  FESMSLKENLLR-GIYAYGYETPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISML- 88

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV--- 138
           ++I    ++ Q ++L+PTRE+A QI  VV+++G ++ N+     IGGT V    R +   
Sbjct: 89  QVINTASRETQALVLSPTRELATQIQSVVKALGDYM-NVQCHACIGGTNVGEDIRKLDQG 147

Query: 139 -QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             IV G+PGR+  MI+ ++L   ++++ ++DEAD+L+N GF E I  +Y  LPP  Q++V
Sbjct: 148 QHIVSGTPGRVADMIRRRHLRTRNIKMLVLDEADELLNQGFREQIYEVYRYLPPATQVVV 207

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT   D L    K+M DP+ I  +     L G+KQ    + +          EE K  
Sbjct: 208 VSATLPQDVLEMTYKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFD 257

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +  +NF    + G   QK R + +  F++ 
Sbjct: 258 TLCDLYDTLTITQAVIFCNTRRKVDWLTDKMRESNFTVSSMHGDMPQKERDSIMQDFRQF 317

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E +
Sbjct: 318 NTRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTNEDV 377

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNL 399
                ++ +I L ++  +  +P N+
Sbjct: 378 ----RILRDIELYYSTQIDEMPMNV 398


>gi|344228534|gb|EGV60420.1| dead Box protein Dhh1p [Candida tenuis ATCC 10573]
          Length = 501

 Score =  206 bits (525), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 202/368 (54%), Gaps = 22/368 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D+ +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKSFE-DLGLKRELLMGIFEAGFEKPSPIQEESIPIALTGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L ++IK  V + Q +IL PTRE+A+Q + VVR++G H+  +      GGT
Sbjct: 79  GKTASFVIPTL-QMIKPKVNKIQGLILVPTRELALQTSQVVRTLGKHL-GIQCMVSTGGT 136

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            V+    R   PV ++VG+PGRI  +      +M    LF+MDEADK+++  F   I  I
Sbjct: 137 PVKDDILRLNDPVHVLVGTPGRILDLASRNIADMSECSLFVMDEADKMLSREFKRTIERI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q L+ SAT+     + +++++  P  I   D    L G+ Q  A        
Sbjct: 197 LELFPSNRQSLLFSATFPLAVKSFMEEHLNKPYEINLMDELT-LKGISQFYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +VDE++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 248 ---FVDEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHARMPQQ 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ARNKVFHEFRMGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIVS 370
           GL + ++S
Sbjct: 365 GLAVNLLS 372


>gi|32475237|ref|NP_868231.1| ATP-dependent RNA helicase [Rhodopirellula baltica SH 1]
 gi|32445778|emb|CAD78509.1| ATP-dependent RNA helicase [Rhodopirellula baltica SH 1]
          Length = 931

 Score =  206 bits (525), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 197/354 (55%), Gaps = 14/354 (3%)

Query: 21  LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAAL 80
           LF  D+ +   +++ +  +G+ K +PIQ    PY+L+G D + QS++GTGK+  F +  L
Sbjct: 305 LF-RDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPIL 363

Query: 81  NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKR 136
           ++ + +  ++PQ ++LAPTRE+A+Q+       GA +    V    GG     Q+++ +R
Sbjct: 364 SR-VDVRSRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLKQLRR 422

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            VQ+VVG+PGR+   +K   L++ S+   ++DEAD+++N GF+ED+ ++  + P  +Q+ 
Sbjct: 423 GVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEGRQVA 482

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT          +Y+ DP  I  +  T     V+Q    +    +P     D+   L
Sbjct: 483 LFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFV----SPR----DKIDAL 534

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L     +  ++F+  +     + E L+   F A  L+G   QK R  ++D  KRG++
Sbjct: 535 TRILEVEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQL 594

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +LV TD+AARG+D   +  V N ++PHD+ +Y+HR+GR GR G  G  I  ++
Sbjct: 595 DVLVATDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLT 648


>gi|242067108|ref|XP_002454843.1| hypothetical protein SORBIDRAFT_04g038330 [Sorghum bicolor]
 gi|241934674|gb|EES07819.1| hypothetical protein SORBIDRAFT_04g038330 [Sorghum bicolor]
          Length = 407

 Score =  206 bits (525), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 123/369 (33%), Positives = 204/369 (55%), Gaps = 24/369 (6%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+S+ D +   D L+     +G+   GF K S IQ  A   ++NG D I Q++SGTGK+
Sbjct: 31  EVVSSFDQMGIKDDLL-----RGIYGYGFEKPSAIQQRAVLPIINGRDVIAQAQSGTGKT 85

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV- 131
              +   + +++   V++ Q +IL+PTRE+A Q   V+ ++G H+ N+ V   IGG  + 
Sbjct: 86  -SMISLTVCQIVDTAVREVQALILSPTRELASQTERVMLAIGDHL-NVQVHACIGGKSIG 143

Query: 132 ---ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
               R +  V +V G+PGR+  MIK + L   +++L ++DEAD++++ GF + I  +Y  
Sbjct: 144 EDIRRLENGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDEADEMLSRGFKDQIYDVYRY 203

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q+ ++SAT  H+ L    K+M +P+ I  +     L G+KQ    + +       
Sbjct: 204 LPPELQVCLISATLPHEILEMTSKFMTEPVRILVKRDELTLEGIKQFFVAVEK------- 256

Query: 249 YVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              EE K   L  L       Q VIF N + + + + E + + NF    + G   Q+ R 
Sbjct: 257 ---EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSAMHGDMPQQERD 313

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
           A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ 
Sbjct: 314 AIMGEFRSGDTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 373

Query: 366 ITIVSAESL 374
           I  V  + +
Sbjct: 374 INFVRKDDI 382


>gi|194333556|ref|YP_002015416.1| DEAD/DEAH box helicase [Prosthecochloris aestuarii DSM 271]
 gi|194311374|gb|ACF45769.1| DEAD/DEAH box helicase domain protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 607

 Score =  206 bits (524), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 116/360 (32%), Positives = 192/360 (53%), Gaps = 13/360 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  P+ + L + G+   +PIQ+   PY+L G D + Q+++GTGK+  F +  L++ I
Sbjct: 35  DLELAAPVIEALDKVGYENPTPIQLQTIPYILQGRDVLGQAQTGTGKTAAFALPILSR-I 93

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
                 PQ ++L PTRE+A+Q+ +  +   A + + HV    GG     Q++R KR V +
Sbjct: 94  DCDKNYPQALVLTPTRELAIQVAEAFQRYAACMPDFHVLPIYGGQDYAGQLKRLKRGVHV 153

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   IK   L +D +   ++DEAD+++  GFV+D+ WI  Q P  +Q+ + SA
Sbjct: 154 VVGTPGRVIDHIKRSSLKLDKLHTLVLDEADEMLRMGFVDDVEWILEQTPASRQVALFSA 213

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T     L   +K++ DP  I  +  +  +  + Q    +            + + L ++L
Sbjct: 214 TMPSVILRIARKHLSDPAEITIKSKSSTVDAITQRFLTVGAHH--------KLEALTRIL 265

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
              PF+  +IF   +   + + E L    + A  LSG   Q  R  ++D  K GK+ I+V
Sbjct: 266 EAEPFDGVIIFVRTRTATQDLSEKLRARGYAAAALSGEMVQHQREKTIDQLKNGKLNIIV 325

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            TD+AARG+D   V  VIN +IP D  +Y+HR+GR GR G  G  I  V++  +    ++
Sbjct: 326 ATDVAARGLDVERVTHVINYDIPSDTESYVHRIGRTGRAGRSGDAILFVTSREMSMLRTI 385


>gi|323499260|ref|ZP_08104237.1| cold-shock DEAD-box protein A [Vibrio sinaloensis DSM 21326]
 gi|323315648|gb|EGA68682.1| cold-shock DEAD-box protein A [Vibrio sinaloensis DSM 21326]
          Length = 646

 Score =  206 bits (524), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 205/376 (54%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L+  GFV  +PIQ A+ P+++ G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNDSILSALEGMGFVSPTPIQAASIPHLMEGVDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++  L V    GGT +    R ++    
Sbjct: 69  -DLGQRKPQAIVLAPTRELAIQVAAEIKNLGQNISGLKVLEIYGGTSIVDQMRALKHGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR++ +I    L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 IVVGTPGRVQDLINRDRLHLDEVHTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ +P+ I        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLREPVTIDVAGKNHTVDKVEQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKASALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    L    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQLRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTKSSMEEIQLPH 375


>gi|343959972|dbj|BAK63843.1| probable ATP-dependent RNA helicase DDX48 [Pan troglodytes]
          Length = 411

 Score =  206 bits (524), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 195/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + +G+   GF K S IQ  A   +  G D I QS+SGTGK+    ++ L + + + 
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQINKGRDVIAQSQSGTGKTATLSISVL-QCLDIQ 103

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           +++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R +     +V G
Sbjct: 104 LRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAG 162

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q++++SAT  
Sbjct: 163 TPGRVFDMIRRRRLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 272

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R + +  F+ G  R+L+
Sbjct: 273 DTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGTSRVLI 332

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V L+IN ++P++    +HR+GR+GRYG +G+ I  V  + +
Sbjct: 333 STDVWARGLDVPQVSLIINYDLPNNRELSIHRIGRSGRYGRKGVAINFVKNDDI 386


>gi|336126222|ref|YP_004578178.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
 gi|335343939|gb|AEH35221.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
          Length = 672

 Score =  206 bits (524), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 121/355 (34%), Positives = 197/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ +   I   L E GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SELALNDSILSALNEMGFVSPTPIQAAAIPFLLEGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G  ++ L V    GG     Q+   K    
Sbjct: 69  -NLSQHKPQAIVMAPTRELAIQVAAEIKNLGQKIQGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K +I    L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLITRDRLHLDECHTFVLDEADEMLKMGFVDDVTWIMEQAPGTAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        + +Y+ DP       A   + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 ATMPPMVKTIVDRYLRDP-------ARVDVAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L +  F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLLSRGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|89072916|ref|ZP_01159473.1| putative ATP-dependent RNA helicase [Photobacterium sp. SKA34]
 gi|89051438|gb|EAR56893.1| putative ATP-dependent RNA helicase [Photobacterium sp. SKA34]
          Length = 654

 Score =  206 bits (524), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 13/344 (3%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
            L   GFV  +PIQ A+ P +L G DA+ ++++GTGK+  F +  LNK + L   +PQ I
Sbjct: 46  ALDNMGFVAPTPIQAASIPLLLTGTDALGKAQTGTGKTAAFSLPVLNK-VDLSQHKPQAI 104

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGRIKQ 150
           ++APTRE+A+Q+   ++ +G ++K L V    GG     Q+   K    IVVG+PGR+K 
Sbjct: 105 VMAPTRELAIQVAAEIKVLGQNIKGLKVLEIYGGASIVDQMRALKNGAHIVVGTPGRVKD 164

Query: 151 MIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATL 210
           +I  K L +D V  F++DEAD+++  GFV+D+TWI  Q P   Q ++ SAT        +
Sbjct: 165 LISRKQLQLDEVHTFVLDEADEMLKMGFVDDVTWIMEQAPETAQRVLFSATMPPIVKEIV 224

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            +++ +P  I      R +  V+Q   ++        + V++++ + +LL     +  ++
Sbjct: 225 DRFLRNPARIDVAGENRTVSKVEQQFWVV--------KGVEKDEAMSRLLETEDTDASIV 276

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F   +   E + + L++  F A  L G   Q  R  ++D  KRG + ILV TD+ ARG+D
Sbjct: 277 FVRTRQDTERLADWLSSRGFKAAALHGDIPQSLRERTVDHIKRGVIDILVATDVVARGLD 336

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
              +  V N +IP D  +Y+HR+GR GR G  G  I +V    +
Sbjct: 337 VPRITHVFNYDIPFDVESYIHRIGRTGRAGRAGKAILLVRTNQI 380


>gi|254584256|ref|XP_002497696.1| ZYRO0F11440p [Zygosaccharomyces rouxii]
 gi|238940589|emb|CAR28763.1| ZYRO0F11440p [Zygosaccharomyces rouxii]
          Length = 523

 Score =  206 bits (524), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 132/388 (34%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 20  QTDDVLNTKGNTFE-DFFLKRELLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 79  GKTAAFVIPTLEK-VKPKINKIQALIMVPTRELALQTSQVVRTLGKHC-GVSCMVTTGGT 136

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V ++VG+PGR+  +   K  ++    LF+MDEADK+++  F   I  I
Sbjct: 137 NLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKTIIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
              LPP  Q L+ SAT+       + K++  P  I   E+ T  L G+ Q  A       
Sbjct: 197 LIFLPPQHQSLLFSATFPITVKEFMVKHLHKPYEINLMEELT--LKGITQYYA------- 247

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 248 ----FVEERQKLHCLNTLFSKLQVNQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMRQ 303

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 304 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 363

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 364 LGLAINLINWNDRFNLYKIEQELGTEIA 391


>gi|356556161|ref|XP_003546395.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 2-like [Glycine max]
          Length = 406

 Score =  206 bits (524), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 195/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+ + GF K S IQ  A   ++ G D I Q++SGTGK+ + +   + +++   
Sbjct: 40  IKDDLLRGIYQYGFEKPSAIQQRAVTPIIQGRDVIAQAQSGTGKTSM-IALTVCQVVDTS 98

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
           V++ Q +IL+PTRE+A Q   V+ ++G  + N+     +GG  V    R     V +V G
Sbjct: 99  VREVQALILSPTRELASQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEYGVHVVSG 157

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   ++++ ++DE+D++++ GF + I  +Y  LPP  Q+ ++SAT  
Sbjct: 158 TPGRVCDMIKRRTLRTRAIKMLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLP 217

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 218 HEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 267

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + N NF    + G   QK R A +  F+ G  R+L+
Sbjct: 268 DTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSSMHGDMPQKERDAIMGEFRAGTTRVLI 327

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 328 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 381


>gi|345862983|ref|ZP_08815196.1| DEAD/DEAH box helicase-like protein [endosymbiont of Tevnia
           jerichonana (vent Tica)]
 gi|345125866|gb|EGW55733.1| DEAD/DEAH box helicase-like protein [endosymbiont of Tevnia
           jerichonana (vent Tica)]
          Length = 606

 Score =  206 bits (524), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 196/347 (56%), Gaps = 13/347 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +PI Q L + G+   SPIQ A+ P +L G D + Q+++GTGK+  F +  L++ I L 
Sbjct: 14  LSEPIMQALADVGYESPSPIQQASIPPLLEGKDLLGQAQTGTGKTAAFALPLLSR-IDLS 72

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
            + PQ ++LAPTRE+A+Q+ + ++S   H+K  HV    GG     Q+ + +R VQ+VVG
Sbjct: 73  RKTPQFLVLAPTRELAIQVAEAMQSYARHIKGFHVLPIYGGQPYDHQLRQLRRGVQVVVG 132

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   I+   L +D++   ++DEAD+++  GF++D+ WI  Q P  +Q+ + SAT  
Sbjct: 133 TPGRVMDHIRRGTLKLDNLDALVLDEADEMLRMGFIDDVEWILEQTPQTRQIALFSATMP 192

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                  Q+++ DP  I+    T     ++Q    +       L  +D    L ++L   
Sbjct: 193 SIIRKVAQRHLNDPTEIKIAAKTSTATTIRQRYWQVS-----GLHKLD---ALTRILECE 244

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
            F+  ++F   ++    + E L    + +E L+G   QK R  +++ FK G++ ILV TD
Sbjct: 245 SFDAMLVFVRTKIATVELAEKLEARGYASEALNGDIPQKQRERTVERFKAGRLDILVATD 304

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   +  VIN +IP+D  +Y+HR+GR GR G  G  I  VS
Sbjct: 305 VAARGLDVERISHVINYDIPYDTESYVHRIGRTGRAGRTGDAILFVS 351


>gi|392967949|ref|ZP_10333365.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
 gi|387842311|emb|CCH55419.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
          Length = 663

 Score =  206 bits (524), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 124/360 (34%), Positives = 199/360 (55%), Gaps = 13/360 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I   + Q + + GFV  SPIQ  A P +L G D I Q+++GTGK+  F + AL ++I
Sbjct: 54  DLDISDDLLQAVTDMGFVSPSPIQAEAIPPILAGRDVIGQAQTGTGKTAAFGIPAL-EMI 112

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQI 140
              V+  Q ++L PTRE+A+Q+ D +R +  + + L V+   GG  +ER  R     V I
Sbjct: 113 DTSVRSVQVLVLCPTRELALQVADEIRKLAKYKRGLRVEAIYGGDSIERQIRSLKGGVHI 172

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V+G+PGR+   ++   L +D+VR+ I+DEAD++++ GF EDI  I   +P  +Q ++ SA
Sbjct: 173 VIGTPGRVMDHMERNTLKLDNVRMMILDEADEMLDMGFREDIESILEDMPEERQTILFSA 232

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T S   +A  QK+  DP+L++     +  L  + +  +  E K  +     + + + +L+
Sbjct: 233 TMSKPIMAITQKFQKDPVLVK---VVKKELTNQNIEQVYFEVKPKA-----KVEVMCRLI 284

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                   ++F N + + + I E+L    + AE L G   Q  R   +  F+ G   ILV
Sbjct: 285 DTYDLKLLLVFCNTKRKVDEIVEDLQIRGYMAEGLHGDLRQAQRNNVMSKFRAGTTNILV 344

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            TD+AARGID  +VD VIN +IP D   Y+HR+GR GR G  G   ++V  +   +F  +
Sbjct: 345 ATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSLVGRDEKYRFREI 404


>gi|51317205|gb|AAT99858.1| unknown [Diachasmimorpha longicaudata entomopoxvirus]
          Length = 379

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 117/381 (30%), Positives = 210/381 (55%), Gaps = 27/381 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           ++K I +G+   GF K S IQ  A    ++G D IVQ++SGTGK+  + ++ L + I   
Sbjct: 13  LKKNILKGIYSCGFEKPSTIQQKAIFPCISGKDVIVQAQSGTGKTATYAISVLQQ-IDTS 71

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK---RPVQIVVGS 144
               Q +IL PTRE+A+Q   V++++G ++ N      IGGT ++  +   +  Q+++G+
Sbjct: 72  NSNIQALILTPTRELALQAQRVLQTIGNYLYNFKCQVCIGGTSIKESQETLKKAQVLIGT 131

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  ++  K ++  ++++ ++DEAD+++   F++ I  I+       Q++++SAT   
Sbjct: 132 PGRMIDLLTRKSIDTKAIKIVVIDEADEMLIDNFLDKIQDIFEFFESHVQVILLSATVPS 191

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQ 258
             + T Q +M DP+ I  ++A   L G++Q              Y++ +K       L  
Sbjct: 192 RVINTSQVFMRDPVKILVKNAELTLEGIRQY-------------YINVKKNDFKAETLFD 238

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           L       Q +IF N + + +V+ E L N NF A  + G   Q+ R   +  F+ GK RI
Sbjct: 239 LYDHLSLTQTLIFCNTRRQVDVLMECLTNRNFTASSIHGDMSQQERDFIMKEFRDGKTRI 298

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFH 378
           L++T+L ARGID   + LVIN ++PH+   Y+HR+GR+GR+G +G+ I  ++ + L K  
Sbjct: 299 LLSTNLLARGIDVQQISLVINYDLPHNRENYIHRIGRSGRFGRKGIAINFITEDELPK-- 356

Query: 379 SLMGEINLDHAFNVGLVPDNL 399
             + E+   +   +  +P+N+
Sbjct: 357 --LAELETFYNTKIDEMPENI 375


>gi|356530272|ref|XP_003533706.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 2-like [Glycine max]
          Length = 407

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 195/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+ + GF K S IQ  A   ++ G D I Q++SGTGK+ + +   + +++   
Sbjct: 41  IKDDLLRGIYQYGFEKPSAIQQRAVTPIIQGRDVIAQAQSGTGKTSM-IALTVCQVVDTS 99

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
           V++ Q +IL+PTRE+A Q   V+ ++G  + N+     +GG  V    R     V +V G
Sbjct: 100 VREVQALILSPTRELASQTEKVILAIGDFI-NIQAHACVGGKSVGEDIRKLEYGVHVVSG 158

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   ++++ ++DE+D++++ GF + I  +Y  LPP  Q+ ++SAT  
Sbjct: 159 TPGRVCDMIKRRTLRTRAIKMLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLP 218

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           H+ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 219 HEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 268

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + N NF    + G   QK R A +  F+ G  R+L+
Sbjct: 269 DTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSSMHGDMPQKERDAIMGEFRAGTTRVLI 328

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 329 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 382


>gi|448084759|ref|XP_004195684.1| Piso0_005086 [Millerozyma farinosa CBS 7064]
 gi|359377106|emb|CCE85489.1| Piso0_005086 [Millerozyma farinosa CBS 7064]
          Length = 541

 Score =  206 bits (523), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/370 (35%), Positives = 205/370 (55%), Gaps = 26/370 (7%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL++    FE +  +++ +  G+ E GF K SP+Q  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNSKGKSFE-EFNLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFI--G 127
           GK+  FV+ AL +  K  + + Q +IL PTRE+A+Q + VVR++G H   L V+  +  G
Sbjct: 79  GKTASFVIPALQQ-TKPKLNKIQALILVPTRELALQTSQVVRTLGKH---LGVECMVTTG 134

Query: 128 GTQ----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
           GT     V R   PV I+VG+PGR+  +   K  ++    LF+MDEADK+++  F   I 
Sbjct: 135 GTSLRDDVMRLNDPVHILVGTPGRVLDLASRKIADLSECPLFVMDEADKMLSREFKRIIE 194

Query: 184 WIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECK 243
            I +  P  +Q L+ SAT+     + + +++  P  I   D    L G+ Q  A      
Sbjct: 195 QILAFFPANRQSLLFSATFPLAVKSFMDQHLTKPYEINLMDELT-LRGISQFYA------ 247

Query: 244 NPSLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQD 300
                +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      
Sbjct: 248 -----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHAKMP 302

Query: 301 QKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYG 360
           Q+AR      F++GKVR+LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G
Sbjct: 303 QQARNKVFHQFRQGKVRVLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFG 362

Query: 361 TRGLVITIVS 370
             GL I ++S
Sbjct: 363 HLGLAINLMS 372


>gi|453083806|gb|EMF11851.1| ATP-dependent RNA helicase FAL1 [Mycosphaerella populorum SO2202]
          Length = 401

 Score =  206 bits (523), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 208/375 (55%), Gaps = 23/375 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + +G+   GF   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I    ++ 
Sbjct: 38  LLRGIYAYGFESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVINTGARET 96

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGR 147
           Q ++L+PTRE+A Q   V+ ++G ++ N+     IGGT +    R +     +V G+PGR
Sbjct: 97  QALVLSPTRELATQSQSVLLALGDYM-NVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGR 155

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +  MI+ + L   S+++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSAT  +D L
Sbjct: 156 VADMIRRRNLRTRSIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVL 215

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTP 264
               K+M DP+ I  +     L G+KQ    + +          EE K   L  L     
Sbjct: 216 DMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLCDLYDTLT 265

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N + + + + + + +ANF    + G   QK R A +  F++G  R+L++TD+
Sbjct: 266 ITQAVIFCNTRRKVDWLTDKMRDANFTVSSMHGEMPQKERDAIMSEFRQGNSRVLISTDV 325

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEI 384
            ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V++E +     ++ +I
Sbjct: 326 WARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDV----RILRDI 381

Query: 385 NLDHAFNVGLVPDNL 399
            L ++  +  +P N+
Sbjct: 382 ELYYSTQIDEMPMNV 396


>gi|425745539|ref|ZP_18863583.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-323]
 gi|425488547|gb|EKU54882.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-323]
          Length = 383

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 114/354 (32%), Positives = 201/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF K +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PVQ+ 
Sbjct: 14  LKKAIDALGFTKMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPVQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    +++     NLH+   +GG   E+ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAQAL-TKFSNLHLVTLLGGVDFEKQKKMLDRNFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  +S     +Q L+ 
Sbjct: 133 IVATPGRLIDFVEQKEVWLDKIEFLVIDEADRLLDMGFIPSVKRIVRFSPFKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ K L +
Sbjct: 193 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNTDVEQRVYVVAK--------EDKYKLLQE 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  LD FK+GK  I
Sbjct: 245 ILREEPIDKVMIFANRRDQVRRLYDHLKRDGYRVGMLSGEIAQDKRLKMLDQFKQGKNNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  VIN  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|145349088|ref|XP_001418972.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579202|gb|ABO97265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 413

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 123/353 (34%), Positives = 193/353 (54%), Gaps = 21/353 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF K S IQ         G+D I Q++SGTGK+  F    L  L    
Sbjct: 47  LQENLLRGIYAYGFEKPSAIQQRGIVPFSKGFDVIQQAQSGTGKTATFCAGILQSL-DYS 105

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVG 143
           V + Q ++LAPTRE+A QI  V+R++G +++ +     +GGT V    R +Q    ++VG
Sbjct: 106 VHECQALVLAPTRELAQQIEKVMRALGDYLQ-VKCHACVGGTSVREDTRILQAGVHVIVG 164

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  M++ + L  DS+++F +DEAD++++ GF + I  I++ LPP  Q+ V SAT  
Sbjct: 165 TPGRVYDMLRRRALKSDSIKIFALDEADEMLSRGFKDQIYDIFTLLPPKVQVGVFSATLP 224

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQL 259
            + L   +K+M  P+ I  +     L G+KQ               VD+E+     L  L
Sbjct: 225 PEALEITRKFMTKPVRILVKRDELTLEGIKQFYV-----------NVDKEQWKLDTLCDL 273

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
                  Q VIF+N + + + + +N+   +F      G  DQ  R   +  F+ G  R+L
Sbjct: 274 YETLAITQSVIFANTRRKVDWLTDNMRARDFTVSATHGDMDQNTRDVIMREFRSGSSRVL 333

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           +TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+AE
Sbjct: 334 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTAE 386


>gi|416236147|ref|ZP_11630513.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 12P80B1]
 gi|326563433|gb|EGE13698.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 12P80B1]
          Length = 581

 Score =  206 bits (523), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 195/359 (54%), Gaps = 24/359 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + KPI + L ++G+   +PIQ  A P+ LNG D ++ +++G+GK+  FV+  L+K+
Sbjct: 21  SDLGLNKPILKALTKSGYTTPTPIQAKAIPHALNGRDLLLSAQTGSGKTAAFVLPVLDKM 80

Query: 84  IKLPV--QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRP 137
            + P   +  Q +IL PTRE+A+Q+ D VR  G  ++N+     +GG     Q+   K+ 
Sbjct: 81  SRKPTIEKHVQALILTPTRELALQVQDSVRRYGDGMRNMFSVPLVGGAPYGGQLRALKKG 140

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQ+++ +PGR+   ++   +++  + + I+DEAD++++ GF +DI  I    P  +Q ++
Sbjct: 141 VQVIIATPGRLIDHMREGRVDLSKLDMLILDEADRMLDMGFADDIKEILQNTPQTRQTVM 200

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE----E 253
            SAT+        +++ V+P            + +K   A I E    S+ Y D+     
Sbjct: 201 SSATWDGAVGKIAERFTVNP----------EKVSIKVESAHIDE----SVYYCDDFNHKN 246

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L+Q+L+     Q VIF+  ++  E +   L  A F A YL G   Q  R   +   K 
Sbjct: 247 NILLQVLNNPKIKQAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKS 306

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           GK  +LV TD+AARGID + +  VIN ++P     Y+HR+GR GR G  G+ + + S +
Sbjct: 307 GKCDVLVATDVAARGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSID 365


>gi|14594802|emb|CAC43286.1| translation initiation factor eIF-4A1 [Arabidopsis thaliana]
          Length = 369

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 126/356 (35%), Positives = 190/356 (53%), Gaps = 33/356 (9%)

Query: 35  GLQEN--------GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKL 86
           GLQEN        GF K S IQ         G D I Q++SGTGK+  F    L +L   
Sbjct: 2   GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-DF 60

Query: 87  PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVV 142
            + Q Q ++LAPTRE+A QI  V+R++G ++  + V   +GGT V   +R +Q    +VV
Sbjct: 61  SLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 119

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+  M+K + L  D++++F++DEAD++++ GF + I  I+  LPP  Q+ V SAT 
Sbjct: 120 GTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATM 179

Query: 203 SHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------L 256
             + L   +K+M  P+ I  +     L G+KQ              YV+ EK+      L
Sbjct: 180 PPEALEITRKFMSKPVRILVKRDELTLEGIKQF-------------YVNVEKEEWKLETL 226

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + + + +       G  DQ  R   +  F+ G  
Sbjct: 227 CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 286

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ +
Sbjct: 287 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 342


>gi|224096586|ref|XP_002310663.1| predicted protein [Populus trichocarpa]
 gi|222853566|gb|EEE91113.1| predicted protein [Populus trichocarpa]
          Length = 407

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 122/384 (31%), Positives = 212/384 (55%), Gaps = 24/384 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+ +  + A  +L+   
Sbjct: 41  LKEDVLRGIYNYGFEKPSAIQQRALMPIIKGRDVIAQAQSGTGKTSMIALTAC-QLVDTA 99

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G ++ N+ V   IGG  V    R     V +V G
Sbjct: 100 NREVQALILSPTRELAEQTEKVITAIGENI-NIQVHACIGGKSVGEDIRKLEYGVHVVSG 158

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   ++R+ ++DE+D++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 159 TPGRVCDMIKRRSLRTRAIRVLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 218

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 219 NEILEITSKFMTDPVKILVKRDELTLEGIKQFFVAVEK----------EEWKFETLTDLY 268

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +   NF    + G   Q+ R A + +F+ G+ R+L+
Sbjct: 269 DTLTITQAVIFCNTKRKVDWLTAKMVEFNFTVSAMHGDMPQRERDAIMSNFRLGETRVLI 328

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +     +
Sbjct: 329 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI----RI 384

Query: 381 MGEINLDHAFNVGLVPDNLTGDQI 404
           + +I   ++  +  +P N+ GD I
Sbjct: 385 LRDIEQYYSTQIDEMPMNI-GDLI 407


>gi|325959925|ref|YP_004291391.1| DEAD/DEAH box helicase [Methanobacterium sp. AL-21]
 gi|325331357|gb|ADZ10419.1| DEAD/DEAH box helicase domain protein [Methanobacterium sp. AL-21]
          Length = 529

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 118/363 (32%), Positives = 205/363 (56%), Gaps = 17/363 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I   I++ +++ GF + +PIQ  A P+VL G D   Q+++GTGK+  F +  L + +
Sbjct: 8   DLNISSEIQRAVEDMGFEEATPIQSLAIPHVLEGKDVTGQAQTGTGKTAAFGIPIL-ETV 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQI 140
               +  Q +IL PTRE+A+Q+ + ++ +  +++ + +    GG  +ER     K+ VQI
Sbjct: 67  DPSNRDLQAVILCPTRELAIQVAEEMKKLSKYMRKIGILPVYGGQPIERQIKALKKGVQI 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           ++G+PGR+   ++   ++M SV++ I+DEAD++++ GF EDI ++   +P  +Q+L+ SA
Sbjct: 127 IIGTPGRVMDHMRRGTIDMGSVKMLILDEADEMLDMGFREDIEFVLDYIPDERQILLFSA 186

Query: 201 TYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           T S D L   ++Y   P  L + P++ T P   +KQ+   + E     +        L +
Sbjct: 187 TMSPDILYITRRYQESPEFLKVVPKELTVP--EIKQIYFEVKEKMKLDV--------LSR 236

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           LL    F   ++F N + R + +  +L    + A+ L G   Q+ R   +  F+ G + I
Sbjct: 237 LLDINDFKLSLVFCNTKRRVDKLVNHLQIRGYAADGLHGDMSQRQRDNVMSKFRSGNIEI 296

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFH 378
           LV TD+AARGID  NV+ V N ++P+D   Y+HR+GR GR G  G+  T VS + + +  
Sbjct: 297 LVATDVAARGIDVDNVEAVFNFDVPNDDEYYVHRIGRTGRAGKTGIAYTFVSGKEVYQLR 356

Query: 379 SLM 381
            +M
Sbjct: 357 DIM 359


>gi|145353098|ref|XP_001420866.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581101|gb|ABO99159.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 404

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 124/354 (35%), Positives = 192/354 (54%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +GL   GF K S IQ  A   +++G D I Q++SGTGK+   +  AL +++   
Sbjct: 38  IREDLLRGLYSYGFEKPSAIQQRAVVPIISGRDVIAQAQSGTGKT-SMISLALCQMLDTT 96

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
            ++ Q ++L+PTRE+AVQ      S+G +  N+ V   IGG  +    R +     IV G
Sbjct: 97  SREVQGLVLSPTRELAVQTEKTALSLG-NFMNVQVHACIGGRSIGDDIRKLDYGCHIVSG 155

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L    +++ ++DEAD+++N GF E I  +Y  LPP  Q+++VSAT  
Sbjct: 156 TPGRVFDMIKRRNLRTRGIKILVLDEADEMLNKGFKEQIYDVYRYLPPETQVVLVSATLP 215

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 216 NEVLEMTSKFMTDPMRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 265

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +   NF    + G   QK R   ++ F+ G  R+L+
Sbjct: 266 DTLTITQAVIFCNTKKKVDWLTEKMRQNNFTVSAMHGDMPQKEREEIMNEFRGGTTRVLI 325

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P +   Y+HR+GR+GRYG +G+ I  V A+ +
Sbjct: 326 TTDVWARGIDVQQVSLVINYDLPGNRENYIHRIGRSGRYGRKGVAINFVKADDV 379


>gi|448080277|ref|XP_004194585.1| Piso0_005086 [Millerozyma farinosa CBS 7064]
 gi|359376007|emb|CCE86589.1| Piso0_005086 [Millerozyma farinosa CBS 7064]
          Length = 539

 Score =  206 bits (523), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/370 (35%), Positives = 204/370 (55%), Gaps = 26/370 (7%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE +  +++ +  G+ E GF K SP+Q  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKSFE-EFNLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFI--G 127
           GK+  FV+ AL +  K  + + Q +IL PTRE+A+Q + VVR++G H   L V+  +  G
Sbjct: 79  GKTASFVIPALQQ-TKPKLNKIQALILVPTRELALQTSHVVRTLGKH---LGVECMVTTG 134

Query: 128 GTQ----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
           GT     V R   PV I+VG+PGR+  +   K  ++    LFIMDEADK+++  F   I 
Sbjct: 135 GTSLRDDVMRLNDPVHILVGTPGRVLDLASRKIADLSECPLFIMDEADKMLSREFKRIIE 194

Query: 184 WIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECK 243
            I +  P  +Q L+ SAT+     + + +++  P  I   D    L G+ Q  A      
Sbjct: 195 QILTFFPANRQSLLFSATFPLAVKSFMDQHLTKPYEINLMDELT-LRGISQFYA------ 247

Query: 244 NPSLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQD 300
                +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      
Sbjct: 248 -----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHAKMP 302

Query: 301 QKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYG 360
           Q+AR      F++GKVR+LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G
Sbjct: 303 QQARNKVFHQFRQGKVRVLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFG 362

Query: 361 TRGLVITIVS 370
             GL I ++S
Sbjct: 363 HLGLAINLMS 372


>gi|207347082|gb|EDZ73384.1| YDL160Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273565|gb|EEU08498.1| Dhh1p [Saccharomyces cerevisiae JAY291]
 gi|259145084|emb|CAY78348.1| Dhh1p [Saccharomyces cerevisiae EC1118]
 gi|323334302|gb|EGA75683.1| Dhh1p [Saccharomyces cerevisiae AWRI796]
          Length = 506

 Score =  206 bits (523), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 134/388 (34%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 36  QTDDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGT 94

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 95  GKTAAFVIPTLEK-VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 152

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V I+VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 153 NLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQI 212

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
            S LP   Q L+ SAT+       + K++  P  I   E+ T  L G+ Q  A       
Sbjct: 213 LSFLPSTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELT--LKGITQYYA------- 263

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 264 ----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 319

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 320 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 379

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 380 LGLAINLINWNDRFNLYKIEQELGTEIA 407


>gi|118374919|ref|XP_001020647.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
 gi|89302414|gb|EAS00402.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
           SB210]
          Length = 396

 Score =  205 bits (522), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 129/362 (35%), Positives = 205/362 (56%), Gaps = 24/362 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E+ +R G+   GF K S +Q  A   ++ G D IVQS++GTGK+ VF +AAL 
Sbjct: 25  FEKMGLKEELLR-GILTYGFDKPSAVQQRAIKPIIKGRDVIVQSQAGTGKTGVFTIAAL- 82

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRP 137
           +++   +++PQ I+L+PTRE+A Q   V  ++G ++ N+ V   IGG      + R ++ 
Sbjct: 83  QIVDKNLREPQVIVLSPTRELAEQTQKVCLALGDYM-NILVHCCIGGKSMDDDINRLEKG 141

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQI+ G+PGRI  MI+ ++L   +V++ ++DEAD++++ GF E +  IY  LP   Q +V
Sbjct: 142 VQIISGTPGRIYDMIQRRHLKTRNVKMLVLDEADQMLSMGFKEQVYDIYRYLPHKNQNVV 201

Query: 198 VSATYSHDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           VSAT   + L    K+M DP+  L++ ++ T  L G+KQ   L+ +          EE K
Sbjct: 202 VSATLPQEILEMTNKFMNDPIKFLVKRDELT--LEGIKQFFILVEK----------EEWK 249

Query: 256 ---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
              L  L +     Q VIF N     + +   +   NF    + G  +QK R   +  F+
Sbjct: 250 FETLCDLYNTITITQAVIFCNTIKAVKWLSGKMREQNFSLCSIHGELNQKERDKIMQDFR 309

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
            G+ R+LV TD+  RG+D   V +VIN ++P +   Y+HR+GR+GR+G +G+ I  V  E
Sbjct: 310 NGEYRVLVATDIWGRGLDVQQVSVVINYDLPTNRELYIHRIGRSGRFGRKGVAINFVKNE 369

Query: 373 SL 374
            +
Sbjct: 370 DV 371


>gi|268565371|ref|XP_002639425.1| Hypothetical protein CBG04018 [Caenorhabditis briggsae]
          Length = 393

 Score =  205 bits (522), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 124/362 (34%), Positives = 200/362 (55%), Gaps = 21/362 (5%)

Query: 17  NIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           N+   F+   L E+ +R G+   GF K S IQ  A P +L   D I Q++SGTGK+  F 
Sbjct: 24  NVVPTFDKMGLREELLR-GIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFS 82

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           ++ L  L    V++ Q +IL+PTRE+AVQI  VV ++G ++ N+     IGGT +    R
Sbjct: 83  ISVLQSL-DTQVRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIR 140

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   +++L ++DEAD+++N GF E +  IY  LPP 
Sbjct: 141 KLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPG 200

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 201 AQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDR----------E 250

Query: 253 EKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
           E K   L+         + S+  L+ + + + +  ANF    + G  +QK R   +  F+
Sbjct: 251 EWKFDTLIDLYD----TLTSSSFLKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFR 306

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
            G  R+L++TD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  +
Sbjct: 307 AGNTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQD 366

Query: 373 SL 374
            +
Sbjct: 367 DV 368


>gi|405950923|gb|EKC18878.1| Eukaryotic initiation factor 4A-III [Crassostrea gigas]
          Length = 1228

 Score =  205 bits (522), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 195/350 (55%), Gaps = 19/350 (5%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + +G+   GF K S IQ  +   ++ G D I Q++SGTGK+  F ++ L  L    +++ 
Sbjct: 36  LLRGIYAYGFEKPSAIQQRSIKPIVKGRDVIAQAQSGTGKTATFSISILQCL-DTQIRET 94

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGR 147
           Q ++L+PTRE+AVQI  V+ ++G ++ ++     IGGT +    R +     +V G+PGR
Sbjct: 95  QALVLSPTRELAVQIQKVILALGDYM-SVQCHACIGGTNIGDDIRKLDYGQHVVSGTPGR 153

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP  Q+ ++SAT  H+ L
Sbjct: 154 VFDMIRRRNLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEIL 213

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTP 264
               K+M DP+ I  +     L G+KQ    +            EE K   L  L     
Sbjct: 214 EMTNKFMTDPIRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLYDTLT 263

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N + + + + E +  ANF    + G   QK R A +  F+ G  R+L+TTD+
Sbjct: 264 ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMVQKEREAIMKEFRSGASRVLITTDV 323

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
            ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 324 WARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 373


>gi|253741975|gb|EES98832.1| Translation initiation factor eIF-4A, putative [Giardia
           intestinalis ATCC 50581]
          Length = 391

 Score =  205 bits (522), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 121/355 (34%), Positives = 202/355 (56%), Gaps = 13/355 (3%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
           G+   G+   S IQ  A   +++G D I Q++SGTGK+  F +  L + I + ++ PQ I
Sbjct: 34  GIFSYGYKTPSAIQSQAIVPIISGKDTIAQAQSGTGKTAAFTIGMLQR-IDIAMKSPQAI 92

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---IVVGSPGRIKQM 151
           IL+PTRE+A+Q   VV  +G+ ++ + V   IGGTQV+      Q   ++V +PGR+  +
Sbjct: 93  ILSPTRELALQTLKVVEGIGSRLQ-VEVAQCIGGTQVDDDITAAQSCHLIVATPGRLLSL 151

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQ 211
           ++ KY+   +V++ I+DEAD++++ GF E I  I   +    Q+++VSAT   + L   +
Sbjct: 152 LQKKYVTTSNVKMVILDEADEMLSRGFTEQIVSIMKFMNADIQIVLVSATLPPEILELTR 211

Query: 212 KYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIF 271
           ++M DP+ I  ++A   L G++Q V  + +     +  V++  K++ +       Q VIF
Sbjct: 212 QFMRDPVSILVKEAELTLDGIRQYVVELQDAWKTEV--VEDIYKVLSV------QQGVIF 263

Query: 272 SNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDA 331
            N   R + + E L +A      +    DQ  R   +  F+ G+ RIL+ T++ ARGID 
Sbjct: 264 CNSIARVKELAEKLKSAGHTISCIHSELDQAERNKIMGEFRSGQTRILIATNIIARGIDV 323

Query: 332 ANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINL 386
            NV LVIN +IP +A TYLHR+GR+GR+G +G+ I  V+ +      S+  + N+
Sbjct: 324 QNVSLVINYDIPREAETYLHRIGRSGRFGRKGVAINFVTDKDKQSMQSITDKFNV 378


>gi|403221126|dbj|BAM39259.1| eukaryotic translation initiation factor [Theileria orientalis
           strain Shintoku]
          Length = 413

 Score =  205 bits (522), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 213/380 (56%), Gaps = 29/380 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE D+ +++ I +G+   GF K S +Q  A   +L+G D I+QS+SGTGK+ VF + AL 
Sbjct: 23  FE-DLGLKEDILKGIFAYGFDKPSAVQQRAIKPILDGRDVIIQSQSGTGKTCVFCLGAL- 80

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP---- 137
           +++   V++ Q ++L+PTRE+A Q   V  ++G +  N+ V   IGG +V    +     
Sbjct: 81  QVVNSNVRETQVLLLSPTRELAEQSQKVCLALGDYC-NVEVHCCIGGKKVSDDIKALESG 139

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQIV G+PGR+  MI  ++LN  +++  I+DEAD+++N GF E +  +Y  LPP  Q+++
Sbjct: 140 VQIVSGTPGRVNHMITDRHLNTRNIKQLILDEADEMLNRGFKEQVYSVYRYLPPTIQVVL 199

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  H+ +    K+M +P  +  +     L G++Q              ++  EK+  
Sbjct: 200 VSATLPHEVIEITNKFMNNPFKVLVKRDELTLEGIRQF-------------FISVEKEQW 246

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  L       Q VIF N + + + + + + +ANF    + G   QK R   +  F
Sbjct: 247 KFDTLCDLYESLIITQAVIFCNTKEKVDWLAKKMKDANFEVCKMHGEMSQKERNDIMQRF 306

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           ++G+ R+L++TDL  RG+D   V LV+N ++P+   +Y+HR+GR+GRYG +G+ I  V  
Sbjct: 307 RKGESRVLISTDLWGRGLDVQQVSLVVNYDLPNSRESYIHRIGRSGRYGRKGVAINFVKV 366

Query: 372 ESLVKFHSLMGEINLDHAFN 391
             L+    ++  + +D  F+
Sbjct: 367 RRLL---VMIAYLVIDGYFD 383


>gi|71033289|ref|XP_766286.1| eukaryotic translation initiation factor 4A [Theileria parva strain
           Muguga]
 gi|68353243|gb|EAN34003.1| eukaryotic translation initiation factor 4A, putative [Theileria
           parva]
          Length = 394

 Score =  205 bits (522), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 200/358 (55%), Gaps = 26/358 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE D+ +++ I +G+   GF K S +Q  A   +L G D I+QS+SGTGK+ VF + AL 
Sbjct: 23  FE-DLGLKEEILKGIFAYGFDKPSAVQQRAIKPILEGRDVIIQSQSGTGKTCVFCLGALQ 81

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP---- 137
             +   V++ Q ++L+PTRE+A Q   V  ++G +  N+ V   IGG +V    +     
Sbjct: 82  T-VNSNVRETQVLLLSPTRELAEQSQKVCLALGDYC-NIEVHCCIGGKKVSDDIKALESG 139

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQIV G+PGR+  MI  ++LN  +++  I+DEAD+++N GF E +  +Y  LPP  Q+++
Sbjct: 140 VQIVSGTPGRVNHMITDRHLNTRNIKQLILDEADEMLNRGFKEQVYSVYRYLPPTIQVVL 199

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT  HD +    K+M +P  +  +     L G+KQ              ++  EK+  
Sbjct: 200 VSATLPHDVIEITNKFMNNPFKVLVKRDELTLEGIKQF-------------FISVEKEQW 246

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  L       Q VIF N + + + + + + + NF    + G   QK R   +  F
Sbjct: 247 KFDTLCDLYESLIITQAVIFCNTKEKVDWLAKKMKDGNFEVCKMHGEMSQKERNDIMQRF 306

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           ++G+ R+L++TDL  RG+D   V LV+N ++P+   +Y+HR+GR+GRYG +G+ I  V
Sbjct: 307 RKGESRVLISTDLWGRGLDVQQVSLVVNYDLPNSRESYIHRIGRSGRYGRKGVAINFV 364


>gi|255719332|ref|XP_002555946.1| KLTH0H01562p [Lachancea thermotolerans]
 gi|238941912|emb|CAR30084.1| KLTH0H01562p [Lachancea thermotolerans CBS 6340]
          Length = 491

 Score =  205 bits (522), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/367 (36%), Positives = 197/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 19  QTDDVLNTRGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPIAIAGRDVLARAKNGT 77

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FVV  L K +K  V + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 78  GKTAAFVVPTLEK-VKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 135

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV I+VG+PGR+  +   K  ++    LF+MDEADK+++  F   I  I
Sbjct: 136 NLRDDILRLNEPVHILVGTPGRVLDLASRKVADLSECPLFVMDEADKMLSRDFKAIIEQI 195

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            + LPP+ Q L+ SAT+       + K++  P  I   D    L G+ Q  A        
Sbjct: 196 LTFLPPVHQSLLFSATFPLTVKEFMVKHLHKPYEINLMDELT-LKGITQYYA-------- 246

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q 
Sbjct: 247 ---FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQS 303

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 304 ERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 363

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 364 GLAINLI 370


>gi|421610904|ref|ZP_16052069.1| cold-shock deAd box protein a [Rhodopirellula baltica SH28]
 gi|408498358|gb|EKK02852.1| cold-shock deAd box protein a [Rhodopirellula baltica SH28]
          Length = 931

 Score =  205 bits (522), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 197/354 (55%), Gaps = 14/354 (3%)

Query: 21  LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAAL 80
           LF  D+ +   +++ +  +G+ K +PIQ    PY+L+G D + QS++GTGK+  F +  L
Sbjct: 305 LF-RDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPIL 363

Query: 81  NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKR 136
           ++ + +  ++PQ ++LAPTRE+A+Q+       GA +    V    GG     Q+++ +R
Sbjct: 364 SR-VDVRSRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLKQLRR 422

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            VQ+VVG+PGR+   +K   L++ S+   ++DEAD+++N GF+ED+ ++  + P  +Q+ 
Sbjct: 423 GVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEGRQVA 482

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT          +Y+ DP  I  +  T     V+Q    +    +P     D+   L
Sbjct: 483 LFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFV----SPR----DKIDAL 534

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L     +  ++F+  +     + E L+   F A  L+G   QK R  ++D  KRG++
Sbjct: 535 TRILEVEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQL 594

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +LV TD+AARG+D   +  V N ++PHD+ +Y+HR+GR GR G  G  I  ++
Sbjct: 595 DVLVATDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLT 648


>gi|260774297|ref|ZP_05883212.1| cold-shock DEAD-box protein A [Vibrio metschnikovii CIP 69.14]
 gi|260611258|gb|EEX36462.1| cold-shock DEAD-box protein A [Vibrio metschnikovii CIP 69.14]
          Length = 633

 Score =  205 bits (522), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 128/376 (34%), Positives = 207/376 (55%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   +   L E GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNSTLLSALNEMGFVTPTPIQSAAIPLLLAGRDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L   +PQ I++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLTQYKPQAIVMAPTRELAIQVAAEIKTLGKNIKGLKVLEIYGGASIVDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           I+VG+PGR+K +I  + L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IIVGTPGRVKDLITRERLHLDECHTFVLDEADEMLKMGFVDDVTWIMEQSPETAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +VD  L  P  A   + G  Q VA + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPIVKDIVDRFLRDP--ARVDVAGSNQTVAKV-EQQYWVVKGVEKDEAMARL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLIARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   ++ V N +IP D  +Y+HR+GR GR G +G  I +V    +    +
Sbjct: 300 VATDVVARGLDVPRINHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTRTSMEEIQLPH 375


>gi|21673432|ref|NP_661497.1| ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
 gi|21646533|gb|AAM71839.1| ATP-dependent RNA helicase DeaD [Chlorobium tepidum TLS]
          Length = 657

 Score =  205 bits (521), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 184/347 (53%), Gaps = 13/347 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +P+ + L+  G+   +PIQ +  P +L G D + Q+++GTGK+  F +  L+  I L 
Sbjct: 34  LAEPLLRALEAVGYENPTPIQASTIPLLLEGRDVLGQAQTGTGKTAAFALPVLSN-IDLS 92

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVG 143
              PQ ++LAPTRE+A+Q+ +   +    +   HV    GG     Q+   KR V +VVG
Sbjct: 93  ATDPQALVLAPTRELAIQVAEAFHTYAEFMPGFHVLPIYGGQDYGVQIRNLKRGVHVVVG 152

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   ++   LN+D+++  ++DEAD+++  GF++D+ WI  Q P  +Q+ + SAT  
Sbjct: 153 TPGRVMDHMRKGTLNLDNLKCLVLDEADEMLRMGFIDDVEWILDQTPESRQVALFSATMP 212

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
              +   +KY+  P  I  +  T  +  ++Q   ++                L ++L   
Sbjct: 213 QPIVRIARKYLKAPAEITIQTKTTTVETIRQRYWMVGGHHKLD--------ALTRILEVE 264

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
           PF+  +IF   +     + E L    + A  L+G   Q AR  +++  K G + I++ TD
Sbjct: 265 PFDGIIIFVRTKTETVALAEKLQARGYAAAALNGDMVQSARERTIEQLKDGTLNIVIATD 324

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   +  VIN +IP D  +Y+HR+GR GR G  G  I  VS
Sbjct: 325 VAARGLDVERISHVINYDIPTDTESYVHRIGRTGRAGRSGEAILFVS 371


>gi|90577457|ref|ZP_01233268.1| putative ATP-dependent RNA helicase [Photobacterium angustum S14]
 gi|90440543|gb|EAS65723.1| putative ATP-dependent RNA helicase [Photobacterium angustum S14]
          Length = 654

 Score =  205 bits (521), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 117/344 (34%), Positives = 189/344 (54%), Gaps = 13/344 (3%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
            L   GFV  +PIQ A+ P +L G DA+ ++++GTGK+  F +  LNK + L   +PQ I
Sbjct: 46  ALDNMGFVAPTPIQAASIPLLLTGTDALGKAQTGTGKTAAFSLPVLNK-VDLSQHKPQAI 104

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGRIKQ 150
           ++APTRE+A+Q+   ++ +G ++K L V    GG     Q+   K    IVVG+PGR+K 
Sbjct: 105 VMAPTRELAIQVAAEIKVLGQNIKGLKVLEIYGGASIVDQMRALKNGAHIVVGTPGRVKD 164

Query: 151 MIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATL 210
           +I  K L +D V  F++DEAD+++  GFV+D+TWI  Q P   Q ++ SAT        +
Sbjct: 165 LISRKQLQLDEVHTFVLDEADEMLKMGFVDDVTWIMEQAPETAQRVLFSATMPPIVKEIV 224

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            +++ +P  I      R +  V+Q   ++        + V++++ + +LL     +  ++
Sbjct: 225 DRFLRNPARIDVAGENRTVSKVEQQFWVV--------KGVEKDEAMSRLLETEDTDASIV 276

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F   +   E + + L++  F A  L G   Q  R  ++D  KRG + ILV TD+ ARG+D
Sbjct: 277 FVRTRQDTERLADWLSSRGFKAAALHGDIPQSLRERTVDHIKRGVIDILVATDVVARGLD 336

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
              +  V N +IP D  +Y+HR+GR GR G  G  I +V    +
Sbjct: 337 VPRITHVFNYDIPFDVESYIHRIGRTGRAGRTGKAILLVRTNQI 380


>gi|330448082|ref|ZP_08311730.1| csdA, DEAD-box RNA helicase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492273|dbj|GAA06227.1| csdA, DEAD-box RNA helicase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 627

 Score =  205 bits (521), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 121/344 (35%), Positives = 194/344 (56%), Gaps = 13/344 (3%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
            L   GFV  +PIQ A+ P +L G DA+ ++++GTGK+  F +  LNK + L   +PQ I
Sbjct: 20  ALDNMGFVAPTPIQAASIPLLLTGVDALGKAQTGTGKTAAFSLPVLNK-VNLSQHKPQAI 78

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGRIKQ 150
           ++APTRE+A+Q+   ++++G ++K L V    GG     Q+   K    IVVG+PGR+K 
Sbjct: 79  VMAPTRELAIQVAAEMKTLGQNIKGLKVLEIYGGASIVDQMRALKNGAHIVVGTPGRVKD 138

Query: 151 MIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATL 210
           +I  K L++D V  F++DEAD+++  GFV+D+TWI  Q P   Q ++ SAT     +  +
Sbjct: 139 LISRKQLHLDEVHTFVLDEADEMLKMGFVDDVTWIMEQAPESAQRVLFSAT-----MPPI 193

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            K +VD  L  PE     + G  + V+ + E +   ++ V++++ + +LL     +  ++
Sbjct: 194 VKEIVDRFLRNPERID--VAGENRTVSKV-EQQFWVVKGVEKDEAMSRLLETEDTDASIV 250

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F   +   E + + L +  F A  L G   Q  R  ++D  KRG + ILV TD+ ARG+D
Sbjct: 251 FVRTRQDTERLADWLCSRGFKAAALHGDIPQSLRERTVDHIKRGVIDILVATDVVARGLD 310

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
              +  V N +IP D  +Y+HR+GR GR G  G  I +V    +
Sbjct: 311 VPRITHVFNYDIPFDVESYIHRIGRTGRAGRTGKAILLVRTNQI 354


>gi|416243311|ref|ZP_11633832.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis BC7]
 gi|326569194|gb|EGE19255.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis BC7]
          Length = 581

 Score =  205 bits (521), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 194/359 (54%), Gaps = 24/359 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + KPI + L ++G+   +PIQ  A P+ LNG D ++ +++G+GK+  FV+  L+K+
Sbjct: 21  SDLGLNKPILKALTKSGYTTPTPIQAKAIPHALNGRDLLLSAQTGSGKTAAFVLPVLDKM 80

Query: 84  IKLPV--QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRP 137
            + P   +  Q +IL PTRE+A+Q+ D VR  G  ++N+     +GG     Q+   K+ 
Sbjct: 81  SRKPTIEKHVQALILTPTRELALQVQDSVRRYGDGMRNMFSVPLVGGAPYGGQLRALKKG 140

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQ+++ +PGR+   ++   +++  + + I+DEAD++++ GF +DI  I    P  +Q ++
Sbjct: 141 VQVIIATPGRLIDHMREGRVDLSKLDMLILDEADRMLDMGFADDIKEILQNTPQTRQTVM 200

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE----E 253
            SAT+        + + V+P            + +K   A I E    S+ Y D+     
Sbjct: 201 SSATWDGAVGKIAESFTVNP----------EKVSIKVESAHIDE----SVYYCDDFNHKN 246

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L+Q+L+     Q VIF+  ++  E +   L  A F A YL G   Q  R   +   K 
Sbjct: 247 NILLQVLNNPKIKQAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKS 306

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           GK  +LV TD+AARGID + +  VIN ++P     Y+HR+GR GR G  G+ + + S +
Sbjct: 307 GKCDVLVATDVAARGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSID 365


>gi|260945084|ref|XP_002616840.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
 gi|238850489|gb|EEQ39953.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
          Length = 517

 Score =  205 bits (521), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 202/369 (54%), Gaps = 22/369 (5%)

Query: 9   ARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSG 68
            +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+G
Sbjct: 19  VQTEDVLNTQGKSFE-DFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNG 77

Query: 69  TGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG 128
           TGK+  FV+  L +++K  + + Q +IL PTRE+A+Q + VVR++G H+  ++     GG
Sbjct: 78  TGKTASFVIPTL-QMVKPKLNKTQALILVPTRELALQTSQVVRTLGKHL-GINCMVTTGG 135

Query: 129 TQ----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITW 184
           T     + R   PV ++VG+PGR+  +      +     LFIMDEADK+++  F   I  
Sbjct: 136 TNLKDDIMRLHDPVHVLVGTPGRVLDLASRNLADFSECPLFIMDEADKMLSREFKNVIEQ 195

Query: 185 IYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKN 244
           I +  P  +Q L+ SAT+ +   + + K++  P  I   D    L G+ Q  A       
Sbjct: 196 ILTFFPEGRQSLLFSATFPYAVKSFMDKHLTKPYEINLMDELT-LRGISQFYA------- 247

Query: 245 PSLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q
Sbjct: 248 ----FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQ 303

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           +AR      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 304 QARNKVFHEFRQGKVRNLVCSDLLTRGIDVQAVNVVINFDFPKTAETYLHRIGRSGRFGH 363

Query: 362 RGLVITIVS 370
            GL I ++S
Sbjct: 364 LGLAINLMS 372


>gi|440713990|ref|ZP_20894578.1| cold-shock DEAD box protein A [Rhodopirellula baltica SWK14]
 gi|436441186|gb|ELP34452.1| cold-shock DEAD box protein A [Rhodopirellula baltica SWK14]
          Length = 895

 Score =  205 bits (521), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 197/354 (55%), Gaps = 14/354 (3%)

Query: 21  LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAAL 80
           LF  D+ +   +++ +  +G+ K +PIQ    PY+L+G D + QS++GTGK+  F +  L
Sbjct: 269 LF-RDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPIL 327

Query: 81  NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKR 136
           ++ + +  ++PQ ++LAPTRE+A+Q+       GA +    V    GG     Q+++ +R
Sbjct: 328 SR-VDVRSRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLKQLRR 386

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            VQ+VVG+PGR+   +K   L++ S+   ++DEAD+++N GF+ED+ ++  + P  +Q+ 
Sbjct: 387 GVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEGRQVA 446

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT          +Y+ DP  I  +  T     V+Q    +    +P     D+   L
Sbjct: 447 LFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFV----SPR----DKIDAL 498

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L     +  ++F+  +     + E L+   F A  L+G   QK R  ++D  KRG++
Sbjct: 499 TRILEVEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQL 558

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +LV TD+AARG+D   +  V N ++PHD+ +Y+HR+GR GR G  G  I  ++
Sbjct: 559 DVLVATDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLT 612


>gi|152013506|sp|Q6BJX6.2|DHH1_DEBHA RecName: Full=ATP-dependent RNA helicase DHH1
          Length = 516

 Score =  205 bits (521), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 200/368 (54%), Gaps = 22/368 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SP+Q  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKTFE-DFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L +  +  V + Q +IL PTRE+A+Q + VVR++G H+  L      GGT
Sbjct: 79  GKTASFVIPCLQQ-ARPKVNKIQALILVPTRELALQTSQVVRTLGKHL-GLQCMVTTGGT 136

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV ++VG+PGR+  +   K  ++    LF+MDEADK+++  F   I  I
Sbjct: 137 SLRDDILRLNDPVHVLVGTPGRVLDLASRKVADLSECPLFVMDEADKMLSREFKGIIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            +  P  +Q L+ SAT+     + + +++  P  I   D    L G+ Q  A        
Sbjct: 197 LAFFPTTRQSLLFSATFPLAVKSFMDQHLTKPYEINLMDELT-LRGISQFYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 248 ---FVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQH 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F++GKVR+LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ARNKVFHEFRQGKVRVLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIVS 370
           GL I ++S
Sbjct: 365 GLAINLMS 372


>gi|448097851|ref|XP_004198777.1| Piso0_002166 [Millerozyma farinosa CBS 7064]
 gi|359380199|emb|CCE82440.1| Piso0_002166 [Millerozyma farinosa CBS 7064]
          Length = 399

 Score =  205 bits (521), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/349 (34%), Positives = 201/349 (57%), Gaps = 13/349 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF   S IQ  A   ++ G D + Q++SGTGK+  F +  L ++I   
Sbjct: 33  LKRELLKGIYAYGFETPSAIQSRAIMQIITGKDTVAQAQSGTGKTATFSIGML-QVIDTK 91

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVG 143
            ++ Q +IL+ TRE+A QI DVV+++G ++ N+     IGGTQV    ++ ++  QIV G
Sbjct: 92  SKECQALILSTTRELAQQIQDVVKNLGDYM-NIQAHACIGGTQVGEDAKKLQQGRQIVSG 150

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  +IK + L+   +++ I+DEAD+L+  GF E+I  IY  LP   Q++VVSAT S
Sbjct: 151 TPGRVVDLIKRQNLSTRHIKMLILDEADELMTRGFKENIYEIYRLLPSNVQVVVVSATLS 210

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
            + L    K+M DP+ I  +     L G+KQ      +C+    ++      L  L    
Sbjct: 211 REVLEVTSKFMTDPVKILVKRDEITLEGIKQYHI---QCEKEEWKF----DTLCDLYDSL 263

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF N +++   +   +  A F  + + G   Q  R + +++F+ G  R+L++TD
Sbjct: 264 TITQAVIFCNTKVKVNWLAHQMKTAGFAVDLMHGDMKQDERDSVMNNFRSGSSRVLISTD 323

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           + ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G  I++++ +
Sbjct: 324 VWARGIDVQQVSLVINYDLPLNKENYIHRIGRSGRFGRKGAAISLLTLQ 372


>gi|45185883|ref|NP_983599.1| ACR197Wp [Ashbya gossypii ATCC 10895]
 gi|74694822|sp|Q75BS4.1|DHH1_ASHGO RecName: Full=ATP-dependent RNA helicase DHH1
 gi|44981673|gb|AAS51423.1| ACR197Wp [Ashbya gossypii ATCC 10895]
 gi|374106805|gb|AEY95714.1| FACR197Wp [Ashbya gossypii FDAG1]
          Length = 484

 Score =  204 bits (520), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 139/433 (32%), Positives = 214/433 (49%), Gaps = 35/433 (8%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  + + +  G+ E GF + SPIQ  A P  L   D + ++K+GT
Sbjct: 19  QTDDVLNTKGNTFE-DFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGT 77

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L +++K  V + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 78  GKTAAFVIPTL-EIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 135

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R   PV ++VG+PGR+  +   K  ++    LF+MDEADK+++  F   +  I
Sbjct: 136 NLRDDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKSLVEQI 195

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            S LP   Q L+ SAT+       + K++  P  I   D    L G+ Q  A        
Sbjct: 196 LSFLPQNHQSLLFSATFPLTVKEFMVKHLNKPYEINLMDEL-TLKGITQYYA-------- 246

Query: 246 SLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q+
Sbjct: 247 ---FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQ 303

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 304 ERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 363

Query: 363 GLVITIVSAESLVKFHSLMGEI-------------NLDHAFNVGLVPDNLTGDQINWTQR 409
           GL I +++       + +  E+             +L  A +   VP     D +    R
Sbjct: 364 GLAINLINWNDRFNLYKIEQELGTEIAAIPAQIDKSLYVAEDTSAVPVPFPLDTMQGNAR 423

Query: 410 VQTLLAKPLDQAQ 422
               +  P  QAQ
Sbjct: 424 AAQQMPHPQQQAQ 436


>gi|417303385|ref|ZP_12090443.1| cold-shock deAd box protein a [Rhodopirellula baltica WH47]
 gi|327540357|gb|EGF26943.1| cold-shock deAd box protein a [Rhodopirellula baltica WH47]
          Length = 862

 Score =  204 bits (520), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 197/354 (55%), Gaps = 14/354 (3%)

Query: 21  LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAAL 80
           LF  D+ +   +++ +  +G+ K +PIQ    PY+L+G D + QS++GTGK+  F +  L
Sbjct: 236 LF-RDLDLRAEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPIL 294

Query: 81  NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKR 136
           ++ + +  ++PQ ++LAPTRE+A+Q+       GA +    V    GG     Q+++ +R
Sbjct: 295 SR-VDVRSRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLKQLRR 353

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            VQ+VVG+PGR+   +K   L++ S+   ++DEAD+++N GF+ED+ ++  + P  +Q+ 
Sbjct: 354 GVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKSPEGRQVA 413

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT          +Y+ DP  I  +  T     V+Q    +      S R  D+   L
Sbjct: 414 LFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFV------SPR--DKIDAL 465

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L     +  ++F+  +     + E L+   F A  L+G   QK R  ++D  KRG++
Sbjct: 466 TRILEVEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQL 525

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +LV TD+AARG+D   +  V N ++PHD+ +Y+HR+GR GR G  G  I  ++
Sbjct: 526 DVLVATDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLT 579


>gi|407716753|ref|YP_006838033.1| ATP-dependent RNA helicase DeaD-like protein [Cycloclasticus sp.
           P1]
 gi|407257089|gb|AFT67530.1| ATP-dependent RNA helicase DeaD-like protein [Cycloclasticus sp.
           P1]
          Length = 594

 Score =  204 bits (520), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 195/350 (55%), Gaps = 13/350 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  P+   L+  G+ + SPIQ  A P++L+G+D I  +++GTGK+  F +  L+K I
Sbjct: 11  DLALSTPVMDALKRIGYEQPSPIQAEAIPHLLDGHDLIGTAQTGTGKTAAFALPLLSK-I 69

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQI 140
            L V  PQ ++LAPTRE+A+Q+ +  ++  + +K  +V    GG    TQ+ + +R V +
Sbjct: 70  DLTVSGPQVLVLAPTRELAIQVAEAFKTYASSMKGFNVLPIYGGQAMDTQLRQLRRGVHV 129

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++ K L +D+++  ++DE D+++  GF+ED+ WI  Q P  +Q+ + SA
Sbjct: 130 VVGTPGRVMDHLRRKTLKLDNLKTIVLDEGDEMLRMGFIEDVEWILEQTPEQRQVALFSA 189

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T          KY+  P +++    T  +  ++Q   ++       L  +D    L ++L
Sbjct: 190 TMPAPIRRVADKYLSSPKVVKIISKTSTVERIEQRFWMVS-----GLHKLD---ALTRIL 241

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
               F+  ++F   +     + E L    + A  ++G   Q  R  ++   K+G++ ILV
Sbjct: 242 EVEDFDGIIMFVRTKALTVELAEKLEARGYSASAINGDMTQALRERTIGQLKKGQIDILV 301

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            TD+AARGID A +  V+N +IP+D   Y+HR+GR GR G  G  I  V+
Sbjct: 302 ATDVAARGIDVARISHVVNYDIPYDTEAYVHRIGRTGRAGRTGKAILFVA 351


>gi|224370609|ref|YP_002604773.1| DEAD/DEAH box helicase [Desulfobacterium autotrophicum HRM2]
 gi|223693326|gb|ACN16609.1| DeaD [Desulfobacterium autotrophicum HRM2]
          Length = 616

 Score =  204 bits (520), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 194/347 (55%), Gaps = 17/347 (4%)

Query: 30  KPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQ 89
           KP+ + L + G+   + IQ    PY+L G D + Q+++GTGK+  F +  L++ I + ++
Sbjct: 28  KPVLKALDDLGYETPTTIQAETIPYILAGRDLLGQAQTGTGKTAAFALPLLSR-IDIKLK 86

Query: 90  QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSP 145
           +PQ ++LAPTRE+A+Q+ +  +   A +K  +V    GG     Q+ + KR V ++VG+P
Sbjct: 87  KPQVLVLAPTRELAIQVAESFKGYAARIKGFNVLPVYGGQAYAGQLNQLKRGVHVIVGTP 146

Query: 146 GRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHD 205
           GR+  ++K   L++  +   ++DEAD+++  GF++D+ WI  Q PP +Q+ + SAT    
Sbjct: 147 GRLMDLMKRGVLDLTQIMTLVIDEADEMLRMGFIDDVEWILEQTPPGRQVALFSATMPAP 206

Query: 206 NLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                 KY+ DP  + IR   AT     ++Q   ++        +   +   L ++L   
Sbjct: 207 IKKIAIKYLTDPKDVFIRLRTATADT--IRQRFWMV--------KGTHKLDALTRILEAE 256

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
            F+  ++F   +     + E L    + A  L+G   QKAR  ++D FK+GK+ ILV TD
Sbjct: 257 TFDAIIVFVRTKTATVELAEKLEARGYAAVALNGDIAQKARERTIDRFKKGKIDILVATD 316

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   V  VIN +IP+ A +Y+HR+GR GR G  G  I  VS
Sbjct: 317 VAARGLDVERVSHVINYDIPNGAESYVHRIGRTGRAGRAGDAILFVS 363


>gi|416156217|ref|ZP_11604349.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 101P30B1]
 gi|416216424|ref|ZP_11623748.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 7169]
 gi|416220842|ref|ZP_11625651.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 103P14B1]
 gi|416228903|ref|ZP_11627835.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 46P47B1]
 gi|416237806|ref|ZP_11631161.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis BC1]
 gi|416245780|ref|ZP_11634675.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis BC8]
 gi|416249012|ref|ZP_11636346.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis CO72]
 gi|326561884|gb|EGE12219.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 7169]
 gi|326563318|gb|EGE13585.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 46P47B1]
 gi|326565972|gb|EGE16133.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 103P14B1]
 gi|326568894|gb|EGE18963.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis BC1]
 gi|326571867|gb|EGE21872.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis BC8]
 gi|326575379|gb|EGE25304.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis 101P30B1]
 gi|326576534|gb|EGE26442.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis CO72]
          Length = 581

 Score =  204 bits (520), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 194/359 (54%), Gaps = 24/359 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + KPI + L ++G+   +PIQ  A P+ LNG D ++ +++G+GK+  FV+  L+K+
Sbjct: 21  SDLGLNKPILKALTKSGYTTPTPIQAKAIPHALNGRDLLLSAQTGSGKTAAFVLPVLDKM 80

Query: 84  IKLPV--QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRP 137
            + P   +  Q +IL PTRE+A+Q+ D VR  G  ++N+     +GG     Q+   K+ 
Sbjct: 81  SRKPTIEKHVQALILTPTRELALQVQDSVRRYGDGMRNMFSVPLVGGAPYGGQLRALKKG 140

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQ+++ +PGR+   ++   +++  + + I+DEAD++++ GF +DI  I    P  +Q ++
Sbjct: 141 VQVIIATPGRLIDHMREGRVDLSKLDMLILDEADRMLDMGFADDIKEILQNTPQTRQTVM 200

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE----E 253
            SAT+        + + V+P            + +K   A I E    S+ Y D+     
Sbjct: 201 SSATWDGAVGKIAESFTVNP----------EKVSIKVESAHIDE----SVYYCDDFNHKN 246

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L+Q+L+     Q VIF+  ++  E +   L  A F A YL G   Q  R   +   K 
Sbjct: 247 NILLQVLNNPKIKQAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKS 306

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           GK  +LV TD+AARGID + +  VIN ++P     Y+HR+GR GR G  G+ + + S +
Sbjct: 307 GKCDVLVATDVAARGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSID 365


>gi|156043018|ref|XP_001588066.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154695693|gb|EDN95431.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 535

 Score =  204 bits (520), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 208/397 (52%), Gaps = 22/397 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FE D  I++ +  G+ E+GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 37  QTEDVTATKGLEFE-DFSIKRDLLMGIFESGFEKPSPIQEEAIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL + I     + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 96  GKTAAFVIPALER-INPKSSKVQCLILVPTRELALQTSQVCKTLGQHL-GVNVMVTTGGT 153

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV I+VG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 154 TLRDDIMRLAEPVHIIVGTPGRILDLAGKNVADLSECNMFIMDEADKLLSPEFTIVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K M DP  I   D    L G+ Q  A        
Sbjct: 214 LQFHPKDRQIMLFSATFPMTVKDFSDKNMADPYEINLMDELT-LRGITQFYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 265 ---FVEEKEKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMIQA 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GR+G  
Sbjct: 322 NRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHL 381

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           GL I ++S E     +++  E+  + A    ++P NL
Sbjct: 382 GLAINLISWEDRFNLYNIEQELGTEIAPIPAIIPRNL 418


>gi|366989153|ref|XP_003674344.1| hypothetical protein NCAS_0A14060 [Naumovozyma castellii CBS 4309]
 gi|342300207|emb|CCC67964.1| hypothetical protein NCAS_0A14060 [Naumovozyma castellii CBS 4309]
          Length = 510

 Score =  204 bits (520), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 203/387 (52%), Gaps = 22/387 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  + G D + ++K+GT
Sbjct: 33  QTDDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEESIPIAITGRDILARAKNGT 91

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K IK  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 92  GKTAAFVIPTLEK-IKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 149

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V ++VG+PGR+  +   K  ++   +LFIMDEADK+++  F   I  I
Sbjct: 150 NLRDDILRLNESVHVLVGTPGRVLDLASRKVADLSDCQLFIMDEADKMLSRDFKTIIEQI 209

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP   Q L+ SAT+       + K++ +P  I   D    L G+ Q  A        
Sbjct: 210 LIFLPKKHQSLLFSATFPLTVKEFMVKHLTNPYEINLMDEL-TLKGITQYYA-------- 260

Query: 246 SLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q+
Sbjct: 261 ---FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQ 317

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F++GKVR LV +DL  RGID   V++VIN + P  + TYLHR+GR+GR+G  
Sbjct: 318 ERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTSETYLHRIGRSGRFGHL 377

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHA 389
           GL I +++       + +  E+  + A
Sbjct: 378 GLAINLINWNDRFNLYKIEQELGTEIA 404


>gi|254505608|ref|ZP_05117754.1| cold-shock deAd box protein a [Vibrio parahaemolyticus 16]
 gi|219551261|gb|EED28240.1| cold-shock deAd box protein a [Vibrio parahaemolyticus 16]
          Length = 647

 Score =  204 bits (520), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 205/380 (53%), Gaps = 20/380 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           V+  +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  
Sbjct: 5   VIQFSDLALNDSILSALDGMGFVSPTPIQAAAIPHLLAGKDALGKAQTGTGKTAAFSLPL 64

Query: 80  LNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ 139
           LNKL  L  ++PQ I+LAPTRE+A+Q+   V+++G ++  L V    GG  +    R ++
Sbjct: 65  LNKL-DLGQRKPQAIVLAPTRELAIQVAAEVKNLGKNIAGLKVLEIYGGASIVDQMRALK 123

Query: 140 ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
               IVVG+PGR++ +I    L++D V  F++DEAD+++N GFV+D+T I    P   Q 
Sbjct: 124 NGAHIVVGTPGRVQDLINRDRLHLDEVHTFVLDEADEMLNMGFVDDVTEIMEHAPESAQR 183

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           ++ SAT      + +++++ DP  I        +  V+Q   ++        + V++++ 
Sbjct: 184 VLFSATMPPMLKSIVERFLRDPETIDVAGKNHTVDKVEQQFWVV--------KGVEKDEA 235

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           + +LL     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G 
Sbjct: 236 MSRLLETEETDASIVFVRTRQDTERLADWLCARGFKASALHGDIPQSLRERTVDHIKQGV 295

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
           + ILV TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    L 
Sbjct: 296 IDILVATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQLR 355

Query: 376 KFHSL-------MGEINLDH 388
              ++       M EI L H
Sbjct: 356 MLRTIERVTKSSMEEIQLPH 375


>gi|244539109|dbj|BAH83152.1| ATP-dependent RNA helicase [Candidatus Ishikawaella capsulata
           Mpkobe]
          Length = 562

 Score =  204 bits (520), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 122/361 (33%), Positives = 195/361 (54%), Gaps = 19/361 (5%)

Query: 15  LSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIV 74
           +SNI   F  D  + K I   L++ G+ K SPIQ+A  PY+L G D +  +++G+GK+  
Sbjct: 1   MSNIKTSFA-DFGLNKNILSALKDMGYEKPSPIQLACIPYLLEGNDVLGMAQTGSGKTAA 59

Query: 75  FVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           F +  LN  I L ++ PQ ++LAPTRE+AVQ+T        H++ ++V    GG     Q
Sbjct: 60  FFLPLLNN-IDLKLESPQILVLAPTRELAVQVTGACNDFAKHMRGVNVLALYGGQRYDIQ 118

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
           ++  ++  QIVVG+PGR+   +K   LN+  +R  ++DEAD+++  GF+ED+  I S +P
Sbjct: 119 LKGLRQGPQIVVGTPGRLLDHLKRGTLNLSQLRCLVLDEADEMLRMGFIEDVETIMSNIP 178

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPED--ATRPLLGVKQLVALIPECKNPSLR 248
             +Q ++ SAT   +     +++M +P  IR +    TRP   + Q       CK  +L 
Sbjct: 179 SKRQTVLFSATMPEEIRRITRRFMKEPHDIRIQSNITTRP--NISQYYWYAYSCKKAAL- 235

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
                   +  L    F+  ++F   +     + E L    +    L+G  +Q  R  +L
Sbjct: 236 --------LSFLEAEDFDAAIVFVRTKNMTLELAEFLYLNGYKCAALNGDMNQIVREKTL 287

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
           + FK G + IL+ TD+AARG+D   + LVIN +IP D  +Y+HR+GR GR G  G  +  
Sbjct: 288 ERFKNGNLDILIATDVAARGLDVERISLVINYDIPLDVESYIHRIGRTGRAGRAGRALLF 347

Query: 369 V 369
           V
Sbjct: 348 V 348


>gi|238878985|gb|EEQ42623.1| eukaryotic initiation factor 4A-12 [Candida albicans WO-1]
          Length = 399

 Score =  204 bits (520), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 200/356 (56%), Gaps = 14/356 (3%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I    
Sbjct: 34  KPDLLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML-EVIDTKS 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGS 144
           ++ Q +IL+PTRE+A+QI +VV+ +G ++ N+H    IGG  V    ++ ++  QIV G+
Sbjct: 93  KECQALILSPTRELAIQIQNVVKHLGDYM-NIHTHACIGGKNVGEDVKKLQQGQQIVSGT 151

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  +IK + L   ++++ I+DEAD+L   GF E I  IY  LPP  Q++VVSAT   
Sbjct: 152 PGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQVVVVSATLPR 211

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
           + L    K+  DP+ I  +     L G+KQ      +C+    ++      L  L     
Sbjct: 212 EVLEMTSKFTTDPVKILVKRDEISLSGIKQYYV---QCEREDWKF----DTLCDLYDNLT 264

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N +L+   + + +   NF    + G   Q  R + ++ F+RG  R+L++TD+
Sbjct: 265 ITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDV 324

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G  I +++ + +V    L
Sbjct: 325 WARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEL 380


>gi|416253243|ref|ZP_11638266.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis O35E]
 gi|326578004|gb|EGE27868.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis O35E]
          Length = 581

 Score =  204 bits (520), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 193/357 (54%), Gaps = 24/357 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + KPI + L ++G+   +PIQ  A P+ LNG D ++ +++G+GK+  FV+  L+K+
Sbjct: 21  SDLGLNKPILKALTKSGYTTPTPIQAKAIPHALNGRDLLLSAQTGSGKTAAFVLPVLDKM 80

Query: 84  IKLPV--QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRP 137
            + P   +  Q +IL PTRE+A+Q+ D VR  G  ++N+     +GG     Q+   K+ 
Sbjct: 81  SRKPTIEKHVQALILTPTRELALQVQDSVRRYGDGMRNMFSVPLVGGAPYGGQLRALKKG 140

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQ+++ +PGR+   ++   +++  + + I+DEAD++++ GF +DI  I    P  +Q ++
Sbjct: 141 VQVIIATPGRLIDHMREGRVDLSKLDMLILDEADRMLDMGFADDIKEILQNTPQTRQTVM 200

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE----E 253
            SAT+        + + V+P            + +K   A I E    S+ Y D+     
Sbjct: 201 SSATWDGAVGKIAESFTVNP----------EKVSIKVESAHIDE----SVYYCDDFNHKN 246

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L+Q+L+     Q VIF+  ++  E +   L  A F A YL G   Q  R   +   K 
Sbjct: 247 NILLQVLNNPKIKQAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKS 306

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           GK  +LV TD+AARGID + +  VIN ++P     Y+HR+GR GR G  G+ + + S
Sbjct: 307 GKCDVLVATDVAARGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCS 363


>gi|296112376|ref|YP_003626314.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis RH4]
 gi|295920070|gb|ADG60421.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis BBH18]
          Length = 577

 Score =  204 bits (520), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 194/359 (54%), Gaps = 24/359 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + KPI + L ++G+   +PIQ  A P+ LNG D ++ +++G+GK+  FV+  L+K+
Sbjct: 21  SDLGLNKPILKALTKSGYTTPTPIQAKAIPHALNGRDLLLSAQTGSGKTAAFVLPVLDKM 80

Query: 84  IKLPV--QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRP 137
            + P   +  Q +IL PTRE+A+Q+ D VR  G  ++N+     +GG     Q+   K+ 
Sbjct: 81  SRKPTIEKHVQALILTPTRELALQVQDSVRRYGDGMRNMFSVPLVGGAPYGGQLRALKKG 140

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQ+++ +PGR+   ++   +++  + + I+DEAD++++ GF +DI  I    P  +Q ++
Sbjct: 141 VQVIIATPGRLIDHMREGRVDLSKLDMLILDEADRMLDMGFADDIKEILQNTPQTRQTVM 200

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE----E 253
            SAT+        + + V+P            + +K   A I E    S+ Y D+     
Sbjct: 201 SSATWDGAVGKIAESFTVNP----------EKVSIKVESAHIDE----SVYYCDDFNHKN 246

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L+Q+L+     Q VIF+  ++  E +   L  A F A YL G   Q  R   +   K 
Sbjct: 247 NILLQVLNNPKIKQAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKS 306

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           GK  +LV TD+AARGID + +  VIN ++P     Y+HR+GR GR G  G+ + + S +
Sbjct: 307 GKCDLLVATDVAARGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSID 365


>gi|209809235|ref|YP_002264773.1| cold-shock DEAD box protein A (ATP-independent RNA helicase)
           [Aliivibrio salmonicida LFI1238]
 gi|208010797|emb|CAQ81193.1| cold-shock DEAD box protein A (ATP-independent RNA helicase)
           [Aliivibrio salmonicida LFI1238]
          Length = 641

 Score =  204 bits (520), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 124/372 (33%), Positives = 197/372 (52%), Gaps = 20/372 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +E+ +   L E GFV  +PIQ  + P +L G DA+ ++++GTGK+  F +  LNK I L 
Sbjct: 13  LEETLLSALDEMGFVAPTPIQAESIPLLLAGRDALGKAQTGTGKTAAFSLPLLNK-INLK 71

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
              PQ II+APTRE+A+Q+   V+++G ++K L V    GG     Q+    R   IVVG
Sbjct: 72  QHNPQAIIMAPTRELAIQVAAEVKNLGRNIKGLKVLEIYGGASIVDQMRALSRGAHIVVG 131

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+K ++    LN+  V  FI+DEAD+++  GFV+D+TWI  + P   Q ++ SAT  
Sbjct: 132 TPGRVKDLLNRDRLNLGEVHTFILDEADEMLKMGFVDDVTWILEKAPETAQRILFSATMP 191

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                 + +Y+ DP  +        +  V Q   ++        + V++++ + +LL   
Sbjct: 192 PMVKTIVDRYLRDPARVDVAGTNNTVEQVTQNFWIV--------KGVEKDEAMSRLLETE 243

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
             +  ++F   +   E + + L+   F A  L G   Q  R  ++D  KRG + ILV TD
Sbjct: 244 EIDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKRGVIDILVATD 303

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL--- 380
           + ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    ++   
Sbjct: 304 VVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERV 363

Query: 381 ----MGEINLDH 388
               M EI L H
Sbjct: 364 TKSSMVEIELPH 375


>gi|146197860|dbj|BAF57641.1| WM6 protein [Dugesia japonica]
          Length = 403

 Score =  204 bits (520), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 123/380 (32%), Positives = 208/380 (54%), Gaps = 18/380 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  +   D + Q+KSG GK+ VFV++ L +L 
Sbjct: 24  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLSTLQQLD 83

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPV-Q 139
                  + ++L  TRE+A QI+        ++ N++V  F GG      +E+ K+ V Q
Sbjct: 84  ATDDGTCKVLVLCHTRELAFQISKEYERFSKYMSNINVSVFYGGVPIRNDIEKLKKSVPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI-NTGFVEDITWIYSQLPPMKQMLVV 198
           ++V +PGR+  +++ K LN+ SV+ FI+DE DK++ N     D+  ++   P  KQ+++ 
Sbjct: 144 LIVATPGRLLDLVRQKALNLKSVKHFILDECDKMLDNVSMRGDVQEVFKLTPHQKQVMMF 203

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DPL I  +D ++  L G+KQ    + E         ++ +KL 
Sbjct: 204 SATLSKEIRPICKKFMQDPLEIFIDDDSKLTLHGLKQHYLKVKEN--------EKNRKLF 255

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +LL +  FNQ ++F     R   +C  L   NF A  +     Q+ R++   +FK  + R
Sbjct: 256 ELLDELQFNQVIVFVKSVQRCIALCNLLCEQNFPAIAIHRQMTQEDRISRYQAFKNFQKR 315

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +LV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT +S E+  K 
Sbjct: 316 LLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDENDAK- 374

Query: 378 HSLMGEINLDHAFNVGLVPD 397
             ++ ++      N+  +PD
Sbjct: 375 --ILNDVQNRFEVNISELPD 392


>gi|79313227|ref|NP_001030693.1| translational initiation factor 4A-1 [Arabidopsis thaliana]
 gi|332641918|gb|AEE75439.1| translational initiation factor 4A-1 [Arabidopsis thaliana]
          Length = 415

 Score =  204 bits (520), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 200/382 (52%), Gaps = 34/382 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           +  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  KLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 79  VIQQAQSGTGKTATFCSGVLQQL-DFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GV 136

Query: 121 HVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R +Q    +VVG+PGR+  M+K + L  D++++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 364 HRIGRSGRFGRKGVAINFVTRD 385


>gi|194336034|ref|YP_002017828.1| DEAD/DEAH box helicase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308511|gb|ACF43211.1| DEAD/DEAH box helicase domain protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 599

 Score =  204 bits (520), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 186/347 (53%), Gaps = 13/347 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +P+ + L + G+   +PIQ    P +L G D + Q+++GTGK+  F +  L+  I L 
Sbjct: 8   LAEPLMRALADVGYENPTPIQAQTIPLILEGRDVLGQAQTGTGKTAAFALPILSN-IDLE 66

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVG 143
             +PQ ++LAPTRE+A+Q+ +  +    H+K  HV    GG     Q+   +R V IVVG
Sbjct: 67  HAEPQALVLAPTRELAIQVAEAFQRYAEHLKGFHVVPIYGGQDYGIQLRMLRRGVHIVVG 126

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   ++   LN+ S++  ++DEAD+++  GF++D+ WI  Q P  +Q+ + SAT  
Sbjct: 127 TPGRVMDHMRRGSLNLASLKCLVLDEADEMLRMGFIDDVEWILDQTPKGRQVALFSATMP 186

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                  QKY+ +P  +  +  T  +  ++Q   ++       +        L ++L   
Sbjct: 187 PVIRRIAQKYLHNPAEVTIQTKTTTVDTIRQRYWIVGGSHKIDI--------LTRILEVE 238

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
           PF+  +IF   +     + E L    +GA  L+G   Q  R  ++D  K G + I++ TD
Sbjct: 239 PFDGMLIFVRTKTMTLELAEKLQARGYGAAALNGDMPQNQRERTVDQLKNGALSIVIATD 298

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   +  VIN +IP D  +Y+HR+GR GR G  G  I  VS
Sbjct: 299 VAARGLDVERISHVINYDIPSDTESYVHRIGRTGRAGRAGDAILFVS 345


>gi|134299771|ref|YP_001113267.1| DEAD/DEAH box helicase [Desulfotomaculum reducens MI-1]
 gi|134052471|gb|ABO50442.1| ATP-dependent RNA helicase DbpA [Desulfotomaculum reducens MI-1]
          Length = 532

 Score =  204 bits (520), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 124/354 (35%), Positives = 196/354 (55%), Gaps = 15/354 (4%)

Query: 21  LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAAL 80
           LF N + +++ I  GL+E GF + +PIQ  A P VL GYD I Q+++GTGK+  F +  +
Sbjct: 9   LFGN-LELDRRIVDGLKEMGFEEPTPIQQLAVPQVLAGYDMIGQAQTGTGKTAAFSIPMI 67

Query: 81  NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP--- 137
            +L     ++ QTII+ PTRE+A+Q+ + +  +G     + V    GG  +ER  R    
Sbjct: 68  ERLNPRK-REVQTIIITPTRELAIQVAEEISKIG-RFSRIKVLPIYGGQSIERQIRSLRL 125

Query: 138 -VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            VQ+VVG+PGR+   ++ + L +D V + I+DEAD++++ GF+EDI  I    P  +Q L
Sbjct: 126 GVQVVVGTPGRLLDHLRRQTLKVDQVDMVILDEADEMLDMGFIEDIEEIIRHTPAERQTL 185

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT   + +   Q+YM DP  +        +  ++Q+    PE KN       + + L
Sbjct: 186 LFSATMPQEIIRLAQQYMTDPKYVTVSKTNLTVPQIEQVFYEAPE-KN-------KLEAL 237

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L  +  +Q ++F   +   + +   L    F A  L G   Q+ R   +  F+  +V
Sbjct: 238 CRILDISDISQGILFCRTKRGVDELVAGLQARGFAAAALHGDLSQQQRNTVMRQFRSSEV 297

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +LV TD+AARG+D   V  VIN +IP D   Y+HR+GR GR G  G+ ITI+S
Sbjct: 298 ELLVATDVAARGLDIEGVSHVINYDIPQDPEFYVHRIGRTGRAGRSGVAITIIS 351


>gi|334185329|ref|NP_001189885.1| translational initiation factor 4A-1 [Arabidopsis thaliana]
 gi|332641920|gb|AEE75441.1| translational initiation factor 4A-1 [Arabidopsis thaliana]
          Length = 407

 Score =  204 bits (520), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 29/377 (7%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN---GFVKESPIQMAAFPYVLNGYDAIVQS 65
           +  +VL   D  F + D + E     GLQEN   GF K S IQ         G D I Q+
Sbjct: 19  KLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGFEKPSAIQQRGIVPFCKGLDVIQQA 78

Query: 66  KSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF 125
           +SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  + V   
Sbjct: 79  QSGTGKTATFCSGVLQQL-DFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHAC 136

Query: 126 IGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVED 181
           +GGT V   +R +Q    +VVG+PGR+  M+K + L  D++++F++DEAD++++ GF + 
Sbjct: 137 VGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQ 196

Query: 182 ITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPE 241
           I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ       
Sbjct: 197 IYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF------ 250

Query: 242 CKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
                  YV+ EK+      L  L       Q VIF N + + + + + + + +      
Sbjct: 251 -------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT 303

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
            G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YLHR+GR
Sbjct: 304 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGR 363

Query: 356 AGRYGTRGLVITIVSAE 372
           +GR+G +G+ I  V+ +
Sbjct: 364 SGRFGRKGVAINFVTRD 380


>gi|343497470|ref|ZP_08735537.1| cold-shock DEAD-box protein A [Vibrio nigripulchritudo ATCC 27043]
 gi|342818317|gb|EGU53184.1| cold-shock DEAD-box protein A [Vibrio nigripulchritudo ATCC 27043]
          Length = 621

 Score =  204 bits (519), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 122/355 (34%), Positives = 201/355 (56%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ +   I   L+  GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SELALNDAILSSLEGMGFVSPTPIQAAAIPHLLEGKDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLSQRKPQAIVLAPTRELAIQVAAEMKNLGQNIKGLKVLEIYGGASIVDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR++ +I    L++D V  F++DEAD+++N GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVQDLINRDRLHLDEVHTFVLDEADEMLNMGFVDDVTWIMEQAPDTAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +V+  L  PE     + G    V  + E +   ++ V++++ + +L
Sbjct: 188 AT-----MPPMLKNIVERFLRNPEHID--VAGKNHTVDKV-EQQFWVVKGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|448101712|ref|XP_004199627.1| Piso0_002166 [Millerozyma farinosa CBS 7064]
 gi|359381049|emb|CCE81508.1| Piso0_002166 [Millerozyma farinosa CBS 7064]
          Length = 399

 Score =  204 bits (519), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 195/343 (56%), Gaps = 13/343 (3%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   ++ G D + Q++SGTGK+  F +  L ++I    ++ Q 
Sbjct: 39  KGIYAYGFETPSAIQSRAIMQIITGKDTVAQAQSGTGKTATFSIGML-QVIDTKSKECQA 97

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGSPGRIK 149
           +IL+ TRE+A QI DVV+++G ++ N+     IGGTQV    ++ ++  QIV G+PGR+ 
Sbjct: 98  LILSTTRELAQQIQDVVKNLGDYM-NIQTHACIGGTQVGEDAKKLQQGRQIVSGTPGRVV 156

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            +IK + L+   +++ I+DEAD+L+  GF E+I  IY  LP   Q++VVSAT S + L  
Sbjct: 157 DLIKRQNLSTRHIKMLILDEADELMTRGFKENIYEIYRLLPSNVQVVVVSATLSREVLEV 216

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCV 269
             K+M DP+ I  +     L G+KQ      +C+    ++      L  L       Q V
Sbjct: 217 TSKFMTDPVKILVKRDEITLEGIKQYHI---QCEKEEWKF----DTLCDLYDSLTITQAV 269

Query: 270 IFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGI 329
           IF N +++   +   +  A F  + + G   Q  R   +++F+ G  R+L++TD+ ARGI
Sbjct: 270 IFCNTKVKVNWLAHQMKTAGFAVDLMHGDMKQDERDTVMNNFRSGSSRVLISTDVWARGI 329

Query: 330 DAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           D   V LVIN ++P     Y+HR+GR+GR+G +G  I++++ +
Sbjct: 330 DVQQVSLVINYDLPLHKENYIHRIGRSGRFGRKGAAISLLTLQ 372


>gi|333986675|ref|YP_004519282.1| DEAD/DEAH box helicase domain-containing protein [Methanobacterium
           sp. SWAN-1]
 gi|333824819|gb|AEG17481.1| DEAD/DEAH box helicase domain protein [Methanobacterium sp. SWAN-1]
          Length = 530

 Score =  204 bits (519), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 119/364 (32%), Positives = 201/364 (55%), Gaps = 21/364 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I   I   + + GF + +PIQ  A P+VL+G D I Q+++GTGK+  F +  L +++
Sbjct: 8   DLDISSEIENAVADMGFEEATPIQSLAIPHVLDGRDVIGQAQTGTGKTAAFGIPIL-EMV 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQI 140
               +  Q +IL PTRE+A+Q+ + +R +  ++  + V    GG  +ER     K+ VQ+
Sbjct: 67  DPGDRSLQAVILCPTRELAIQVAEEIRKLSKYMSKIKVLPIYGGQPIERQIKALKKGVQV 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           ++G+PGR+   ++   L MDSV++ ++DEAD++++ GF +DI  +   +P  +Q L+ SA
Sbjct: 127 IIGTPGRVMDHMRRGTLKMDSVKIMVLDEADEMLDMGFRDDIEIVLRDMPSERQTLLFSA 186

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T S D L   +KY  +P            L V      +PE +   + +  +EK  ++LL
Sbjct: 187 TMSRDILNLTRKYQNNP----------EFLKVVHQELTVPEIQQ--IYFEVKEKMKLELL 234

Query: 261 SQT----PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
           S+      F   ++F N + R + +  +L    + A+ L G   Q  R   +  F+ GK+
Sbjct: 235 SRLLDIHNFKLSLVFCNTKRRVDKLVTHLQIRGYAADGLHGDMTQSQRDRVMAKFRNGKI 294

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
            +LV TD+AARGID  NV+ V N ++P+D   Y+HR+GR GR G  G+  T VS + + +
Sbjct: 295 EVLVATDVAARGIDVENVEAVFNYDVPNDDEYYVHRIGRTGRAGKTGMAFTFVSGKEIYQ 354

Query: 377 FHSL 380
              +
Sbjct: 355 LRDI 358


>gi|344304932|gb|EGW35164.1| RNA helicase of DEAD box family [Spathaspora passalidarum NRRL
           Y-27907]
          Length = 517

 Score =  204 bits (519), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/368 (35%), Positives = 202/368 (54%), Gaps = 22/368 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKSFE-DFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L + +K  V + Q +IL PTRE+A+Q + VVR++G H+  +      GGT
Sbjct: 79  GKTASFVIPCLQQ-VKPKVSKIQALILVPTRELALQTSQVVRTLGKHLA-IQCMVTTGGT 136

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV ++VG+PGR+  +   K +++    +F+MDEADK+++  F   I  I
Sbjct: 137 SLRDDIVRLNDPVHVLVGTPGRVLDLAARKVVDLSECPVFVMDEADKMLSREFKGIIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               PP +Q L+ SAT+     + + K++  P  I   D    L G+ Q  A        
Sbjct: 197 LEFFPPNRQALLFSATFPLAVKSFMDKHLHKPYEINLMDELT-LRGISQFYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 248 ---FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQ 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIVS 370
           GL I ++S
Sbjct: 365 GLAINLMS 372


>gi|334183295|ref|NP_001185220.1| translation initiation factor 4A-2 [Arabidopsis thaliana]
 gi|332194953|gb|AEE33074.1| translation initiation factor 4A-2 [Arabidopsis thaliana]
          Length = 407

 Score =  204 bits (519), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 132/377 (35%), Positives = 199/377 (52%), Gaps = 29/377 (7%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN---GFVKESPIQMAAFPYVLNGYDAIVQS 65
           R  +VL   D  F + D + E     GLQEN   GF K S IQ         G D I Q+
Sbjct: 19  RLNEVLDGQDEFFTSYDEVHESFDAMGLQENLLRGFEKPSAIQQRGIVPFCKGLDVIQQA 78

Query: 66  KSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF 125
           +SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G + + + V   
Sbjct: 79  QSGTGKTATFCSGVLQQL-DYALLQCQALVLAPTRELAQQIEKVMRALGDY-QGVKVHAC 136

Query: 126 IGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVED 181
           +GGT V   +R +Q    +VVG+PGR+  M++ + L  D +++F++DEAD++++ GF + 
Sbjct: 137 VGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQ 196

Query: 182 ITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPE 241
           I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ       
Sbjct: 197 IYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF------ 250

Query: 242 CKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
                  YV+ EK+      L  L       Q VIF N + + + + + + + +      
Sbjct: 251 -------YVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT 303

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
            G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YLHR+GR
Sbjct: 304 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGR 363

Query: 356 AGRYGTRGLVITIVSAE 372
           +GR+G +G+ I  V+ +
Sbjct: 364 SGRFGRKGVAINFVTLD 380


>gi|296190482|ref|XP_002743273.1| PREDICTED: eukaryotic initiation factor 4A-III-like [Callithrix
           jacchus]
          Length = 437

 Score =  204 bits (519), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 120/365 (32%), Positives = 199/365 (54%), Gaps = 20/365 (5%)

Query: 18  IDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           +DV    D + + + + +G+   GF K S IQ  A   ++ G D   QS+SGTGK+  F 
Sbjct: 34  VDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVTAQSQSGTGKTATFN 93

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
           ++ L + + + V++ Q +ILAPTRE+AVQI   + ++G ++ N+     IGGT V    R
Sbjct: 94  ISVL-QCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQCHTCIGGTNVGEDIR 151

Query: 137 PV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF E I  +Y  LPP 
Sbjct: 152 KLDYGQHVVAGTPGRVFDMIRGRSLRTCAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 211

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    +            E
Sbjct: 212 TQVVLISATLPHEILEMTNKFMTDPVRILVKRDKLTLEGIKQFFVAVER----------E 261

Query: 253 EKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           E K   L  L       Q VIF N + + + + E +  ANF    + G   QK   + + 
Sbjct: 262 EWKFDTLCDLYDTLTITQVVIFCNTKRKVDWLTEKMREANFTVSSIHGDMPQKEWESIMK 321

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            F+ G  ++L++TD+ ARG+D   V L+I  ++ ++   Y+HR+GR+GRYG +G+ I  V
Sbjct: 322 EFRAGTSQVLISTDVWARGLDVPQVSLIITYDLTNNRELYIHRIGRSGRYGRKGVAINFV 381

Query: 370 SAESL 374
             + +
Sbjct: 382 KNDDI 386


>gi|328873249|gb|EGG21616.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
           fasciculatum]
          Length = 397

 Score =  204 bits (519), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 128/368 (34%), Positives = 197/368 (53%), Gaps = 27/368 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + K + +G+   GF K S IQ  A   +  GYD I Q++SGTGK+  F +  L++ I   
Sbjct: 33  LPKDLLRGVYSYGFEKPSAIQQRAITPLAKGYDIIAQAQSGTGKTATFTIGILSQ-INTS 91

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVG 143
           + + Q +I+APTRE+A+QI  VV S+G ++K +     IGGT+V    +  +  V +VVG
Sbjct: 92  IFKCQALIIAPTRELAIQIQKVVVSLGEYLK-IKCYACIGGTKVSDDVQSLQSGVHVVVG 150

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+ +M+    +  +S+R+F++DEAD++++ GF + I  I+  LP   Q+ + SAT +
Sbjct: 151 TPGRVHEMLSRGVITRESIRIFVLDEADEMLSRGFKDQIYEIFRLLPEKIQVGLFSATMT 210

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD---EEKK---LV 257
            + L    K+M  P+ I  +     L G++Q              YV+   E+ K   L 
Sbjct: 211 EETLGITTKFMNTPVKILVKKDELTLEGIRQF-------------YVNVGSEQGKFDVLT 257

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + +   L    F      G  DQK R   L SF+ G  R
Sbjct: 258 DLYETLSITQSVIFCNTRRKVDWLTNKLTEQQFTVSSTHG--DQKDREGILSSFRSGITR 315

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L+TTDL ARGID   V LVIN +IP +   Y+HR+GR+GR+G +G+ I  ++     K 
Sbjct: 316 VLITTDLLARGIDVQQVSLVINYDIPGNLENYIHRIGRSGRFGRKGVAINFITNNEQDKI 375

Query: 378 HSLMGEIN 385
             L    N
Sbjct: 376 QELSTHYN 383


>gi|401841299|gb|EJT43708.1| DHH1-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 507

 Score =  204 bits (519), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 133/388 (34%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 36  QTDDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGT 94

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L + +K  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 95  GKTAAFVIPTLER-VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 152

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V I+VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 153 NLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQI 212

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
            S LP   Q L+ SAT+       + K++  P  I   E+ T  L G+ Q  A       
Sbjct: 213 LSFLPTTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELT--LKGITQYYA------- 263

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 264 ----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 319

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 320 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 379

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 380 LGLAINLINWNDRFNLYKIEQELGTEIA 407


>gi|256077147|ref|XP_002574869.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
 gi|353230753|emb|CCD77170.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
          Length = 401

 Score =  204 bits (519), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 120/366 (32%), Positives = 200/366 (54%), Gaps = 20/366 (5%)

Query: 17  NIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           NI+V+   D + +   + +G+   GF + S IQ  A   ++ G D I Q++SGTGK+   
Sbjct: 23  NIEVIPSFDSMCLRDDLLRGIYAYGFERPSAIQQRAIKQIVKGRDVIAQAQSGTGKTATL 82

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK 135
            ++ L +++   +++ Q ++L+PTRE+A QI  V+ ++G ++ N+      GGT +    
Sbjct: 83  GISIL-QMLDTQLRETQALVLSPTRELASQIQKVILALGDYM-NVQCHACYGGTNIGEDI 140

Query: 136 RPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           R +     ++ G+PGR+  MI+ + L   +V+LF++DEAD++++ GF E I  +Y  LPP
Sbjct: 141 RKLDYGQHVISGTPGRVFDMIRRRSLRTRAVKLFVLDEADEMLDKGFKEQIYDVYRYLPP 200

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
             Q++++SAT  H+ L    K+M +P+ I  +     L G+KQ    +            
Sbjct: 201 GTQVVLLSATMPHEILEMTSKFMTNPVRILVKRDELTLEGIKQFFVAVER---------- 250

Query: 252 EEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           EE K   L  L       Q VIF N + +   + E +   NF    + G   QK R   +
Sbjct: 251 EEWKFDTLCDLYDTLTVTQSVIFCNTKRKVAWLTEKMLKNNFTVASMHGDMVQKEREEIM 310

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G  R+L+TTDL ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  
Sbjct: 311 KDFRAGDSRVLITTDLWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF 370

Query: 369 VSAESL 374
           V  + +
Sbjct: 371 VKTDDI 376


>gi|333983621|ref|YP_004512831.1| DEAD/DEAH box helicase [Methylomonas methanica MC09]
 gi|333807662|gb|AEG00332.1| DEAD/DEAH box helicase domain protein [Methylomonas methanica MC09]
          Length = 580

 Score =  204 bits (519), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 190/350 (54%), Gaps = 13/350 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ + +P+ + LQ  G+   SPIQ    P+V+ G D + Q+++GTGK+  F +  L + I
Sbjct: 13  DLALSEPVLKALQTIGYETPSPIQAQIIPFVMAGRDVLGQAQTGTGKTAAFAMPILTR-I 71

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQI 140
            +  + PQ ++LAPTRE+A+Q+ +  +S  AH+K  HV    GG     Q+ +  R   +
Sbjct: 72  DIKQKDPQALVLAPTRELAIQVAEAFQSYAAHIKGFHVLPIYGGQDYSVQLRQLNRGAHV 131

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++   L +D ++  ++DEAD+++  GF++D+ WI  Q P  +Q  + SA
Sbjct: 132 VVGTPGRVMDHMRRGTLKLDQLKTLVLDEADEMLRMGFIDDVEWILEQTPSTRQTALFSA 191

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T   +     QKY+ +P  +  +  T     ++Q    +       L  +D    L ++L
Sbjct: 192 TMPTEIRKIAQKYLSNPEQVTIKVKTTTAANIRQRYWFVS-----GLHKMD---ALTRIL 243

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
               F+  +IF   +     + E L    F A  ++G   Q  R  ++++ K GK+ IL+
Sbjct: 244 EAENFDGMIIFVRTKTATIEVAEKLEARGFSASAINGDMSQALRERAIENLKNGKLDILI 303

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            TD+AARG+D   +  V+N +IP+D  +Y+HR+GR GR G  G  I  VS
Sbjct: 304 ATDVAARGLDVDRITHVVNYDIPYDTESYVHRIGRTGRAGRTGDAILFVS 353


>gi|59713567|ref|YP_206342.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
 gi|59481815|gb|AAW87454.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
          Length = 634

 Score =  204 bits (518), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 121/372 (32%), Positives = 199/372 (53%), Gaps = 20/372 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ I   L + GFV  +PIQ A+ P +L G DA+ ++++GTGK+  F +  LNK I L 
Sbjct: 13  LDESILSALDDMGFVAPTPIQAASIPLLLEGRDALGKAQTGTGKTAAFSLPLLNK-INLK 71

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
              PQ II+APTRE+A+Q+   V+++G ++K L V    GG     Q+    R   I+VG
Sbjct: 72  QHNPQAIIMAPTRELAIQVAAEVKNLGRNIKGLKVLEIYGGASIVDQMRALSRGAHIIVG 131

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+K ++    LN+  V  FI+DEAD+++  GFV+D+TWI  + P   Q ++ SAT  
Sbjct: 132 TPGRVKDLLNRDRLNLGEVHTFILDEADEMLKMGFVDDVTWILEKAPDTAQRILFSATMP 191

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                 + +Y+ +P  +        +  V+Q   ++        + V++++ + +LL   
Sbjct: 192 PMVKTIVDRYLREPARVDVAGTNHTVDKVEQNFWVV--------KGVEKDEAMSRLLETE 243

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
             +  ++F   +   E + + L+   F A  L G   Q  R  ++D+ K G + ILV TD
Sbjct: 244 ETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSQRERTVDNIKNGVIDILVATD 303

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL--- 380
           + ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    ++   
Sbjct: 304 VVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQMRMLRTIERV 363

Query: 381 ----MGEINLDH 388
               M EI L H
Sbjct: 364 TKSTMEEIQLPH 375


>gi|297834230|ref|XP_002884997.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330837|gb|EFH61256.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 412

 Score =  204 bits (518), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 199/380 (52%), Gaps = 34/380 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           +  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  KLNEVLEGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 79  VIQQAQSGTGKTATFCSGVLQQL-DFSLVQCQALVLAPTRELAQQIEKVMRALGDYL-GV 136

Query: 121 HVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R +Q    +VVG+PGR+  M+K + L  D++++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVS 370
           HR+GR+GR+G +G+ I  V+
Sbjct: 364 HRIGRSGRFGRKGVAINFVT 383


>gi|429327243|gb|AFZ79003.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
           equi]
          Length = 451

 Score =  204 bits (518), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 126/367 (34%), Positives = 203/367 (55%), Gaps = 29/367 (7%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+ + D L  N+ L+     +G+   GF + S IQ      ++  YD I Q++SGTGK+
Sbjct: 26  EVVDSFDALKLNEDLL-----RGIYSYGFERPSAIQQRGIKPIIENYDTIGQAQSGTGKT 80

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT--- 129
             F +AAL ++I   +   Q +ILAPTRE+A QI  VV ++G ++K +     +GGT   
Sbjct: 81  ATFSIAAL-QIINYDLMSCQILILAPTRELAQQIQKVVLALGDYLK-VQCHACVGGTVVR 138

Query: 130 -QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
             V + K  V +VVG+PGR+  MI  K L  D ++LFI+DEAD++++ GF   I  ++ +
Sbjct: 139 DDVHKLKAGVHMVVGTPGRVYDMIDKKALLTDKMKLFILDEADEMLSRGFKGQIQEVFKR 198

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPS 246
           LP   Q+ + SAT  ++ L    K+M  P  +L++ ++ T  L G+KQ   +        
Sbjct: 199 LPSDIQVALFSATMPNEILELTTKFMRSPKRILVKKDELT--LEGIKQFYVM-------- 248

Query: 247 LRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
              VD++ K   L  L       Q +I+ N + + +++ + +   +F    + G   QK 
Sbjct: 249 ---VDKDYKFETLCDLYESVTITQAIIYCNTRRKVDMLTQKMQEKDFTVSSMHGDMGQKE 305

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     Y+HR+GR+GR+G +G
Sbjct: 306 RDLIMREFRSGSTRVLITTDLLARGIDVQQVSLVINYDLPISPDNYIHRIGRSGRFGRKG 365

Query: 364 LVITIVS 370
           + I  V+
Sbjct: 366 VAINFVT 372


>gi|119477499|ref|ZP_01617690.1| DEAD/DEAH box helicase-like protein [marine gamma proteobacterium
           HTCC2143]
 gi|119449425|gb|EAW30664.1| DEAD/DEAH box helicase-like protein [marine gamma proteobacterium
           HTCC2143]
          Length = 608

 Score =  204 bits (518), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 199/372 (53%), Gaps = 16/372 (4%)

Query: 15  LSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIV 74
           +S  +V    ++ +  P+++ +   G+ + SPIQ A  P++LNG D +  +++GTGK+  
Sbjct: 1   MSTPEVTSFTELALSAPVQKAVSIVGYEQPSPIQAATIPHLLNGDDLLGVAQTGTGKTAA 60

Query: 75  FVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           F +  L++ I L    PQ ++LAPTRE+A+Q+ +  ++  + +K  HV    GG     Q
Sbjct: 61  FALPLLSR-IDLKKNSPQVLVLAPTRELAIQVAEAFKTYASQMKGFHVLPIYGGQDMSGQ 119

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
           + + KR   +VVG+PGR+   ++   LN+D +   ++DEAD+++  GF++D+ WI    P
Sbjct: 120 LRQLKRGAHVVVGTPGRVMDHLRRGSLNLDGLTGLVLDEADEMLRMGFIDDVEWILEHTP 179

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           P +Q+ + SAT          +Y+ DP  + I  +  T P +  + L+       N   R
Sbjct: 180 PKRQVALFSATMPKPIRKVADRYLSDPKEVRIATDATTAPRIEQRYLIV------NGFDR 233

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
            +D    + ++L    F+  +IF   +     + E L    + A  L+G  +Q  R  ++
Sbjct: 234 KLDA---ITRILEADDFDAMIIFVRTKTATAELAEKLEARGYSASALNGDMNQALRERTI 290

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
           +  K+ ++ I+V TD+AARGID   V  V+N +IP+D   Y+HR+GR GR G  G  I  
Sbjct: 291 NRLKKKQLDIIVATDVAARGIDVERVSHVLNFDIPYDPEAYVHRIGRTGRAGREGKAILF 350

Query: 369 VSAESLVKFHSL 380
           V+       H++
Sbjct: 351 VAPREKRLLHTI 362


>gi|406602119|emb|CCH46306.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
          Length = 396

 Score =  204 bits (518), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 199/359 (55%), Gaps = 25/359 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I    ++ 
Sbjct: 34  LLKGIYGYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML-EVIDSKNRET 92

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGR 147
           Q ++L+PTRE+A+QI +V++++G ++ N+     IGGT V    + +     IV G+PGR
Sbjct: 93  QALVLSPTRELAIQIQNVIKALGDYM-NVQCHACIGGTNVGSDIKALSKGQHIVSGTPGR 151

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +  MIK + LN  +V++ I+DEAD+L++ GF E I  IY QLP   Q++VVSAT   D L
Sbjct: 152 VLDMIKRRNLNTRNVKMLILDEADELLSKGFKEQIYDIYRQLPAGTQVVVVSATLPKDVL 211

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLLS 261
               K+  DP+ I  +     L G+KQ              ++  EK+      L  L  
Sbjct: 212 EMTSKFTTDPVKILVKRDELTLEGIKQ-------------YFIAVEKEDWKFDTLCDLYD 258

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
                Q VIF N + + + + + +  +NF    + G   Q  R   ++ F+ G  R+L++
Sbjct: 259 SLTITQAVIFCNTKKKVDWLSDKMKESNFTVVAMHGDMKQDERDQIMNDFRLGNSRVLIS 318

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           TD+ ARGID   V LVIN ++P+D   Y+HR+GR+GR+G +G+ I  V+ E +   H +
Sbjct: 319 TDVWARGIDVQQVSLVINYDLPNDRENYIHRIGRSGRFGRKGVAINFVTNEDVQPLHDI 377


>gi|406981744|gb|EKE03149.1| hypothetical protein ACD_20C00242G0002 [uncultured bacterium]
          Length = 634

 Score =  204 bits (518), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 188/351 (53%), Gaps = 13/351 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I   I   +++ GF + SPIQ  A P +L+G D I Q+++GTGK+  F +  + KL    
Sbjct: 30  ISTEILAAVKDMGFEEASPIQSEAIPILLSGKDLIGQAQTGTGKTAAFAIPVIEKL-DPN 88

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQIVVG 143
            ++ Q +IL PTRE+ +Q+++  R +  + +NL V    GG ++ER     KR VQ+V+G
Sbjct: 89  SKELQAVILCPTRELVIQVSEEFRKLLKYKENLWVTPIYGGQEIERQLRTLKRGVQVVIG 148

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR    ++   + M SV+  ++DEAD++++ GF ED+  I    P  +Q ++ SAT +
Sbjct: 149 TPGRTMDHMRRGSIKMHSVQTVVLDEADEMLDMGFREDMEIILKDTPKERQTIMFSATMA 208

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
            D L   ++Y VDP +I   +       ++Q+   + E   P +        L +LL   
Sbjct: 209 KDILELTKQYQVDPAIINVTNKKIHAPKIEQVYFEVQEKNKPEV--------LARLLDIH 260

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
                ++F N + + + + ENL    + A+ L G   Q  R   ++ F+ G V ILV TD
Sbjct: 261 NVKLALVFCNTKSQVDQLVENLKTRGYFADALHGDMSQNQRDRVMNGFRNGSVEILVATD 320

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +A RGID  +++ V N ++P D   Y HR+GR  R G  G   T ++ + +
Sbjct: 321 VAGRGIDVNDIEAVFNYDLPRDDEDYTHRIGRTARAGKTGTAFTFITGKQI 371


>gi|145332383|ref|NP_001078148.1| translational initiation factor 4A-1 [Arabidopsis thaliana]
 gi|332641919|gb|AEE75440.1| translational initiation factor 4A-1 [Arabidopsis thaliana]
          Length = 402

 Score =  204 bits (518), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 126/356 (35%), Positives = 190/356 (53%), Gaps = 33/356 (9%)

Query: 35  GLQEN--------GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKL 86
           GLQEN        GF K S IQ         G D I Q++SGTGK+  F    L +L   
Sbjct: 35  GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-DF 93

Query: 87  PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVV 142
            + Q Q ++LAPTRE+A QI  V+R++G ++  + V   +GGT V   +R +Q    +VV
Sbjct: 94  SLIQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQAGVHVVV 152

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+  M+K + L  D++++F++DEAD++++ GF + I  I+  LPP  Q+ V SAT 
Sbjct: 153 GTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATM 212

Query: 203 SHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------L 256
             + L   +K+M  P+ I  +     L G+KQ              YV+ EK+      L
Sbjct: 213 PPEALEITRKFMSKPVRILVKRDELTLEGIKQF-------------YVNVEKEEWKLETL 259

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + + + +       G  DQ  R   +  F+ G  
Sbjct: 260 CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 319

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ +
Sbjct: 320 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 375


>gi|145481077|ref|XP_001426561.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393636|emb|CAK59163.1| unnamed protein product [Paramecium tetraurelia]
          Length = 395

 Score =  204 bits (518), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 132/387 (34%), Positives = 210/387 (54%), Gaps = 26/387 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E+ +R G+   GF K S +Q  A   V+ G D IVQS+SGTGK+ VF ++AL+
Sbjct: 24  FESMSLREELLR-GIYAFGFNKPSAVQQRAIVPVIQGRDVIVQSQSGTGKTAVFSLSALS 82

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE----RPKRP 137
            +I L +++PQ +IL+ TRE+A Q   V  ++G  + N+ +   IGG  ++    + +  
Sbjct: 83  -MIDLSIREPQVLILSNTRELAEQSAKVAMALGDFL-NVSIHACIGGHSIQDDISKLQHG 140

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQIV G+PGR+  MI+ K L +  +++ I+DEAD+++  GF + +  IY  LPP  Q +V
Sbjct: 141 VQIVSGTPGRVFDMIQRKELRVRHLKMLILDEADEMLTKGFKQQVYDIYRYLPPTTQNVV 200

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK--- 254
           VSAT   + L    K+M +PL I  +     L G+KQ               VD+E+   
Sbjct: 201 VSATLPQEILDMTDKFMNNPLKILVKRDELTLEGIKQFFI-----------QVDKEEWKF 249

Query: 255 -KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF +   + E +   +    F    ++G   QK R   +  F++
Sbjct: 250 DTLCDLYDTLTITQAVIFCSTINKCEWLANKMREHEFTVVQMNGKMSQKERDKIMAEFRQ 309

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  R+L+ TD+  RG+D   V LVIN ++P+    Y+HR+GR+GR+G +G+ I  V  E 
Sbjct: 310 GNKRVLIATDVWGRGLDVQQVSLVINYDLPNSRELYIHRIGRSGRFGRKGVAINFVKQED 369

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNLT 400
           +     L+ +I   ++  +  +P N+T
Sbjct: 370 V----RLLRDIEQYYSTQIDEMPMNVT 392


>gi|78189083|ref|YP_379421.1| DEAD/DEAH box helicase-like protein [Chlorobium chlorochromatii
           CaD3]
 gi|78171282|gb|ABB28378.1| ATP-dependent RNA helicase CsdA [Chlorobium chlorochromatii CaD3]
          Length = 640

 Score =  204 bits (518), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 184/345 (53%), Gaps = 17/345 (4%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           + + L+E G+   +PIQ    P++L G D + Q+++GTGK+  F   AL  L  + +QQ 
Sbjct: 21  LMKALEEVGYESPTPIQAQTIPFLLAGRDVLGQAQTGTGKTAAF---ALPILASIDIQQA 77

Query: 91  -PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVGSP 145
            PQ ++LAPTRE+A+Q+ +  +    ++K  HV    GG     Q    +R VQ+VVG+P
Sbjct: 78  EPQALVLAPTRELAIQVAEAFQRYAEYLKGFHVVPIYGGQDYGIQFRMLRRGVQVVVGTP 137

Query: 146 GRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHD 205
           GR+   I+   LN+  ++  ++DEAD+++  GF++D+ WI  Q P  +Q+ + SAT    
Sbjct: 138 GRVMDHIRRGSLNLTHLKTLVLDEADEMLRMGFIDDVEWILEQTPAGRQVALFSATMPPP 197

Query: 206 NLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPF 265
                QKY+  P  +  +  T  +  ++Q   ++       +        L ++L   PF
Sbjct: 198 IRRIAQKYLDQPAEVTIQTKTTTVDTIRQRYWVVGGSHKLDI--------LTRILEVEPF 249

Query: 266 NQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLA 325
           +  +IFS  +     + E L    + A  L+G   Q  R  +++  K G + I+V TD+A
Sbjct: 250 DGMIIFSRTKTMTIELAEKLQARGYAAAALNGDMPQNQRERTIEQLKNGNINIVVATDVA 309

Query: 326 ARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           ARG+D   +  V+N +IP D  +Y+HR+GR GR G  G  I  V+
Sbjct: 310 ARGLDVERISHVVNYDIPSDTESYVHRIGRTGRAGRAGDAILFVA 354


>gi|289548721|ref|YP_003473709.1| DEAD/DEAH box helicase [Thermocrinis albus DSM 14484]
 gi|289182338|gb|ADC89582.1| DEAD/DEAH box helicase domain protein [Thermocrinis albus DSM
           14484]
          Length = 365

 Score =  204 bits (518), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 123/357 (34%), Positives = 191/357 (53%), Gaps = 29/357 (8%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +P+R+ + E GF   +PIQ  A P  L GYD + Q+ +GTGK+  F +  L KL K  
Sbjct: 8   LSEPLRKSITEMGFQHPTPIQREAIPLALAGYDLLGQAATGTGKTAAFGIPILEKLGKED 67

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR-----PVQIVV 142
           +     +IL PTRE+A+Q+ D +  + A  K L V  F GGT V +  +     P  +VV
Sbjct: 68  LLG--ALILTPTRELALQVKDQLFQL-ARYKGLRVFAFYGGTSVAKDIQVLSTVPPHVVV 124

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGRIK +I   Y++++ VR F++DEAD +++ GF+EDI +I S LP  +Q  + SAT 
Sbjct: 125 GTPGRIKDLIGRGYISLEKVRFFVLDEADLMLDMGFIEDIEYIVSHLPNRRQTFMFSATL 184

Query: 203 SHDNLATLQKYMVDPLLI----RPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
                   ++Y+ +   +     PE              L P+ +   +R     +KL +
Sbjct: 185 PRQVEELAKRYLREHYRVVKVYTPE--------------LRPKIEERLIRLSSSAQKLSE 230

Query: 259 L---LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L   L +    + ++F   +   + + E L    F A  L G   Q+ R ++L  F+ GK
Sbjct: 231 LEKILREHLLEKVIVFVKTKKDAKDLHEVLRRKGFNAVALHGDMTQRQRESALKLFRDGK 290

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           V+I+V TD+A+RG+D   V LVIN  +P D   Y+HR+GR GR G+ G   + V+ E
Sbjct: 291 VKIVVATDVASRGLDIKGVGLVINYHLPEDPEIYIHRIGRTGRIGSYGKAYSFVTPE 347


>gi|221633115|ref|YP_002522340.1| cold-shock dead-box protein a [Thermomicrobium roseum DSM 5159]
 gi|221156880|gb|ACM06007.1| cold-shock dead-box protein a [Thermomicrobium roseum DSM 5159]
          Length = 534

 Score =  204 bits (518), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 127/401 (31%), Positives = 208/401 (51%), Gaps = 27/401 (6%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
            L++ GF +  P+Q  A P +L+G DAIVQ+ +GTGK+  F +  L  L+      PQ +
Sbjct: 26  ALRDVGFEQPMPVQTEAIPVLLSGRDAIVQAHTGTGKTAAFALPILQGLVPYG-HGPQAL 84

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR----PVQIVVGSPGRIKQ 150
           +L PTRE+A+Q+ + +  +G ++ +  V    GG  +ER  R    PV ++VG+PGRI  
Sbjct: 85  VLTPTRELAIQVAEAIHRLGRYL-DARVLALYGGQPIERQLRALRHPVDVIVGTPGRIMD 143

Query: 151 MIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATL 210
            ++ + L +D VR+ I+DEAD++++ GF+ED+ WI   +P  +Q  + SAT         
Sbjct: 144 HLRRETLRLDQVRVVILDEADEMLDMGFIEDVEWILEHVPRERQTALFSATIPPRIRQLT 203

Query: 211 QKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQC 268
           Q+Y+  P  + I PE  T P   + Q V  +            + + L ++L        
Sbjct: 204 QRYLRAPVTIAIHPERVTVP--SIAQTVYEVAAHA--------KLEALSRILDYEAPTSA 253

Query: 269 VIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARG 328
           +IF   +   + +   L +  + AE + G   Q  R  ++  F+ G+V +L+ TD+AARG
Sbjct: 254 IIFVRTKSGADELAHKLQSLGYAAEAIHGDLSQAMRDRAMQRFRAGQVDLLIATDVAARG 313

Query: 329 IDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINLDH 388
           +D   V  VIN +IP D  +Y+HR+GR GR G  G  IT++         +      ++ 
Sbjct: 314 LDIPAVSHVINFDIPSDPESYVHRIGRTGRAGATGTAITLIEPRERWLLRT------IER 367

Query: 389 AFNVGLVPDNL-TGDQINWTQRVQTLLAKPLDQAQEREDVE 428
           A    L+P  + T ++I   QR   LL   L +  E+ D+E
Sbjct: 368 AIGQRLIPKRIPTREEIARRQR--ELLGASLSEVIEQRDLE 406


>gi|241948951|ref|XP_002417198.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
 gi|223640536|emb|CAX44790.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
          Length = 399

 Score =  204 bits (518), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 199/356 (55%), Gaps = 14/356 (3%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I    
Sbjct: 34  KPDLLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML-EVIDTKS 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGS 144
           ++ Q +IL+PTRE+A+QI +VV+ +G ++ N+H    IGG  V    ++ ++  QIV G+
Sbjct: 93  KECQALILSPTRELAIQIQNVVKHLGDYM-NIHTHACIGGKNVGDDVKKLQQGQQIVSGT 151

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  +IK + L   ++++ I+DEAD+L   GF E I  IY  LPP  Q++VVSAT   
Sbjct: 152 PGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQVVVVSATLPR 211

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
           + L    K+  DP+ I  +     L G+KQ      +C+    ++      L  L     
Sbjct: 212 EVLEMTSKFTTDPVKILVKRDEISLSGIKQFYV---QCEREDWKF----DTLCDLYDNLT 264

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N +L+   + + +   NF    + G   Q  R + ++ F+RG  R+L++TD+
Sbjct: 265 ITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNEFRRGNSRVLISTDV 324

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G  I +++ + +     L
Sbjct: 325 WARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVATLKDL 380


>gi|406864186|gb|EKD17232.1| eukaryotic initiation factor 4A [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 426

 Score =  203 bits (517), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 142/401 (35%), Positives = 220/401 (54%), Gaps = 31/401 (7%)

Query: 11  TKDVLSNIDVLFEN-DVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSG 68
           T  + SN D   ++ D +  KP + +G+   GF + S IQ  A   V++G D I Q++SG
Sbjct: 41  TGQIESNYDETVDSFDAMELKPELLRGVYAYGFERPSAIQQRAILPVISGRDVIAQAQSG 100

Query: 69  TGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG 128
           TGK+  F ++ L KL    V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGG
Sbjct: 101 TGKTATFSISVLQKL-DPAVKQCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGG 158

Query: 129 TQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITW 184
           T V    + +Q    IVVG+PGR++ MI+ ++L  DS+++F++DEAD++++ GF E I  
Sbjct: 159 TSVRDDMKALQDGPHIVVGTPGRVQDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYD 218

Query: 185 IYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKN 244
           I+  LP   Q++++SAT   D L    K+M DP+ I  + A   L G+KQ          
Sbjct: 219 IFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKAELTLEGIKQF--------- 269

Query: 245 PSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
               Y+  EK+      L  L       Q VIF N + + + + + L   +F    + G 
Sbjct: 270 ----YIAVEKEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGD 325

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
            DQ  R   +  F+ G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR
Sbjct: 326 MDQGQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGR 385

Query: 359 YGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           +G +G+ I  V+A+ +     +M EI   ++  +  +P N+
Sbjct: 386 FGRKGVAINFVTADDV----RMMREIEQFYSTQIEEMPMNV 422


>gi|68474769|ref|XP_718592.1| hypothetical protein CaO19.10024 [Candida albicans SC5314]
 gi|68474936|ref|XP_718509.1| hypothetical protein CaO19.2488 [Candida albicans SC5314]
 gi|74627388|sp|Q5A9Z6.1|FAL1_CANAL RecName: Full=ATP-dependent RNA helicase FAL1
 gi|46440277|gb|EAK99585.1| hypothetical protein CaO19.2488 [Candida albicans SC5314]
 gi|46440366|gb|EAK99673.1| hypothetical protein CaO19.10024 [Candida albicans SC5314]
          Length = 399

 Score =  203 bits (517), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/353 (35%), Positives = 199/353 (56%), Gaps = 14/353 (3%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I    
Sbjct: 34  KPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML-EVIDTKS 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGS 144
           ++ Q +IL+PTRE+A+QI +VV+ +G ++ N+H    IGG  V    ++ ++  QIV G+
Sbjct: 93  KECQALILSPTRELAIQIQNVVKHLGDYM-NIHTHACIGGKNVGEDVKKLQQGQQIVSGT 151

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  +IK + L   ++++ I+DEAD+L   GF E I  IY  LPP  Q++VVSAT   
Sbjct: 152 PGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQVVVVSATLPR 211

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
           + L    K+  DP+ I  +     L G+KQ      +C+    ++      L  L     
Sbjct: 212 EVLEMTSKFTTDPVKILVKRDEISLSGIKQYYV---QCEREDWKF----DTLCDLYDNLT 264

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N +L+   + + +   NF    + G   Q  R + ++ F+RG  R+L++TD+
Sbjct: 265 ITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDV 324

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
            ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G  I +++ + +V  
Sbjct: 325 WARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTL 377


>gi|193212281|ref|YP_001998234.1| DEAD/DEAH box helicase domain-containing protein [Chlorobaculum
           parvum NCIB 8327]
 gi|193085758|gb|ACF11034.1| DEAD/DEAH box helicase domain protein [Chlorobaculum parvum NCIB
           8327]
          Length = 647

 Score =  203 bits (517), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 184/347 (53%), Gaps = 13/347 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +P+ Q L+  G+   +PIQ    P +L G D + Q+++GTGK+  F +  L+  I L 
Sbjct: 24  LAEPLLQALEAVGYETPTPIQANTIPLLLEGRDVLGQAQTGTGKTAAFALPTLSN-IDLS 82

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVG 143
           +  PQ ++LAPTRE+A+Q+ +   +    + + HV    GG     Q+   KR V +VVG
Sbjct: 83  LSDPQVLVLAPTRELAIQVAEAFHTYAEFMPDFHVLPIYGGQDYGVQIRMLKRGVHVVVG 142

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   ++   LN+D ++  ++DEAD+++  GF++D+ WI  Q P  +Q+ + SAT  
Sbjct: 143 TPGRVMDHMRKGTLNLDGLKCLVLDEADEMLRMGFIDDVEWILDQTPESRQVALFSATMP 202

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
              L   +KY+  P  I  +  T  +  ++Q   ++                L ++L   
Sbjct: 203 QPILRIARKYLKAPAEITIQAKTTTVETIRQRYWMVGGHHKLD--------ALTRILEVE 254

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
           PF+  +IF   +     + E L    + A  L+G   Q AR  +++  K G + I++ TD
Sbjct: 255 PFDGIIIFVRTKTETVNLAEKLQARGYLAAALNGDMVQSARERTIEQLKDGTLNIVIATD 314

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   +  VIN +IP D  +Y+HR+GR GR G  G  I  VS
Sbjct: 315 VAARGLDVDRISHVINYDIPTDTESYVHRIGRTGRAGRSGEAILFVS 361


>gi|21555870|gb|AAM63951.1| Eukaryotic initiation factor 4A, putative [Arabidopsis thaliana]
          Length = 412

 Score =  203 bits (517), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 200/382 (52%), Gaps = 34/382 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           +  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  KLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 79  VIQQAQSGTGKTATFCSGVLQQL-DFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GV 136

Query: 121 HVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R +Q    +VVG+PGR+  M+K + L  D++++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKXDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 364 HRIGRSGRFGRKGVAINFVTRD 385


>gi|110740927|dbj|BAE98559.1| eukaryotic protein synthesis initiation factor 4A [Arabidopsis
           thaliana]
          Length = 412

 Score =  203 bits (517), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 199/382 (52%), Gaps = 34/382 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           +  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  KLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 79  VIQQAQSGTGKTTTFCSGVLQQL-DFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GV 136

Query: 121 HVDYFIGGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R     V +VVG+PGR+  M+K + L  D++++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQASVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 364 HRIGRSGRFGRKGVAINFVTRD 385


>gi|449135622|ref|ZP_21771069.1| cold-shock deAd-box protein a [Rhodopirellula europaea 6C]
 gi|448885676|gb|EMB16100.1| cold-shock deAd-box protein a [Rhodopirellula europaea 6C]
          Length = 851

 Score =  203 bits (517), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 198/354 (55%), Gaps = 14/354 (3%)

Query: 21  LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAAL 80
           LF  D+ + + +++ +  +G+ K +PIQ    PY+L+G D + QS++GTGK+  F +  L
Sbjct: 226 LF-RDLDLREEVQKAVAASGYDKPTPIQAEIIPYMLDGRDVLAQSQTGTGKTAAFALPIL 284

Query: 81  NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKR 136
           ++ + +  ++PQ ++LAPTRE+A+Q+       GA +    V    GG     Q+++ +R
Sbjct: 285 SR-VDVRNRRPQVLVLAPTRELAIQVARSFTKYGADLSGFQVAAIYGGQDYEPQLKQLRR 343

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            VQ+VVG+PGR+   +K   L++ S+   ++DEAD+++N GF+ED+ ++  + P  +Q+ 
Sbjct: 344 GVQVVVGTPGRVIDHVKRGTLDLGSLDCLVLDEADEMLNMGFLEDVQFVLEKTPEGRQVA 403

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT          +Y+ DP  I  +  T     V+Q    +      S R  D+   L
Sbjct: 404 LFSATLPKPIRKIADEYLNDPARITIKSKTITAASVRQRALFV------SPR--DKIDAL 455

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L     +  ++F+  +     + E L+   F A  L+G   QK R  ++D  KRG++
Sbjct: 456 TRILEVEETDGVIVFTKTKDSTLSVAEKLSQQGFSAIALNGDMPQKVRERTIDQLKRGQL 515

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +LV TD+AARG+D   +  V N ++PHD+ +Y+HR+GR GR G  G  I  ++
Sbjct: 516 DVLVATDVAARGLDVPRISHVFNFDLPHDSESYVHRIGRTGRAGRSGQAIIFLT 569


>gi|340504037|gb|EGR30527.1| hypothetical protein IMG5_129800 [Ichthyophthirius multifiliis]
          Length = 396

 Score =  203 bits (517), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 127/360 (35%), Positives = 200/360 (55%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L ++ IR G+   GF K S +Q  A   ++ G D IVQS+SGTGK+ VF ++AL 
Sbjct: 25  FEKMNLKDELIR-GILTYGFDKPSAVQQRAIKPIIQGRDVIVQSQSGTGKTGVFCISAL- 82

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK----RP 137
           +++   +++PQ +I++PTRE+A Q   V  ++G H+ N+ V   IGG  +E  K    + 
Sbjct: 83  QIVDKNLREPQILIVSPTRELAEQSQKVCLALGDHM-NIIVHCCIGGKSMEDDKNSLEKG 141

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V IV G+PGRI  MI+ ++L   ++++ I+DEAD++++ GF + +  IY  LP   Q +V
Sbjct: 142 VHIVSGTPGRIYDMIQKRHLRTRNLKMLILDEADEMLSKGFKQQVYDIYRYLPHNNQNVV 201

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL- 256
           VSAT   + L    K+  +P+ I  +     L G+KQ    + +          EE KL 
Sbjct: 202 VSATLPQEILEMTNKFTNNPIKILVKRDELTLEGIKQFFISVEK----------EEWKLE 251

Query: 257 --VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
               L +     Q VIF N +   E + + +   NF   Y+ G   QK R   +  F+ G
Sbjct: 252 TLCDLYNTITVTQAVIFCNTKKIVEWLADQMTKQNFSLCYIHGGMSQKERDKVMHEFRNG 311

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           + RIL+ TD+  RG+D   V +VIN ++P +   Y+HR+GR+GR+G +G+ I  V  E +
Sbjct: 312 QYRILIATDIWGRGLDVQQVSVVINYDLPSNRELYIHRIGRSGRFGRKGVAINFVKNEDV 371


>gi|255729496|ref|XP_002549673.1| hypothetical protein CTRG_03970 [Candida tropicalis MYA-3404]
 gi|240132742|gb|EER32299.1| hypothetical protein CTRG_03970 [Candida tropicalis MYA-3404]
          Length = 554

 Score =  203 bits (517), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 202/368 (54%), Gaps = 22/368 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKSFE-DFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  L +L+K  + + Q +IL PTRE+A+Q + VVR++G H+  +      GGT
Sbjct: 79  GKTASFIIPCL-QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHL-GVQCMVTTGGT 136

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV I+VG+PGR+  +   K +++    LF+MDEADK+++  F   I  I
Sbjct: 137 SLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q L+ SAT+     + + +++  P  I   D    L G+ Q  A        
Sbjct: 197 LEFFPANRQALLFSATFPLAVKSFMDQHLNKPYEINLMDELT-LKGISQFYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 248 ---FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQ 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIVS 370
           GL I ++S
Sbjct: 365 GLAINLMS 372


>gi|170754379|ref|YP_001780277.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B1 str.
           Okra]
 gi|429244269|ref|ZP_19207737.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum CFSAN001628]
 gi|169119591|gb|ACA43427.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B1 str.
           Okra]
 gi|428758710|gb|EKX81114.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum CFSAN001628]
          Length = 425

 Score =  203 bits (517), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 204/378 (53%), Gaps = 25/378 (6%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGIDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--------LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT-- 129
           L  L K         P++    ++LAPTRE+A+QI D     G ++ NL      GG   
Sbjct: 60  LQNLSKGKKVNKNPRPIR---ALVLAPTRELAIQIGDSFECYGKYI-NLKSAVIFGGVSQ 115

Query: 130 --QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYS 187
             Q +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S
Sbjct: 116 NPQTKALREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIIS 175

Query: 188 QLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSL 247
           +LP ++Q L+ SAT   +    +   + DP+ +    A+  +  + Q V  + + +  +L
Sbjct: 176 KLPKVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPASSTVDTITQEVYHVRKKQKRAL 235

Query: 248 RYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLAS 307
                   L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +
Sbjct: 236 --------LKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRA 287

Query: 308 LDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVIT 367
           L++FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+
Sbjct: 288 LNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAIS 347

Query: 368 IVSAESLVKFHSLMGEIN 385
               E      ++   IN
Sbjct: 348 FCDIEETKSLKAIEKLIN 365


>gi|18400210|ref|NP_566469.1| translational initiation factor 4A-1 [Arabidopsis thaliana]
 gi|1170503|sp|P41376.1|IF4A1_ARATH RecName: Full=Eukaryotic initiation factor 4A-1; Short=eIF-4A-1;
           AltName: Full=ATP-dependent RNA helicase eIF4A-1;
           AltName: Full=DEAD-box ATP-dependent RNA helicase 4
 gi|16554|emb|CAA46188.1| eukaryotic translation initiation factor 4A-1 [Arabidopsis
           thaliana]
 gi|11994363|dbj|BAB02322.1| eukaryotic translation initiation factor; RNA helicase [Arabidopsis
           thaliana]
 gi|14594805|emb|CAC43288.1| translation initiation factor eIF-4A1 [Arabidopsis thaliana]
 gi|15293047|gb|AAK93634.1| putative Eukaryotic initiation factor 4A [Arabidopsis thaliana]
 gi|15450486|gb|AAK96536.1| AT3g13920/MDC16_4 [Arabidopsis thaliana]
 gi|20259055|gb|AAM14243.1| putative eukaryotic initiation factor 4A [Arabidopsis thaliana]
 gi|20466101|gb|AAM19972.1| AT3g13920/MDC16_4 [Arabidopsis thaliana]
 gi|22655066|gb|AAM98124.1| unknown protein [Arabidopsis thaliana]
 gi|23397033|gb|AAN31802.1| putative eukaryotic initiation factor 4A [Arabidopsis thaliana]
 gi|332641917|gb|AEE75438.1| translational initiation factor 4A-1 [Arabidopsis thaliana]
          Length = 412

 Score =  203 bits (517), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 200/382 (52%), Gaps = 34/382 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           +  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  KLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 79  VIQQAQSGTGKTATFCSGVLQQL-DFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GV 136

Query: 121 HVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R +Q    +VVG+PGR+  M+K + L  D++++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 364 HRIGRSGRFGRKGVAINFVTRD 385


>gi|169347296|ref|ZP_02866234.1| hypothetical protein CLOSPI_00011 [Clostridium spiroforme DSM 1552]
 gi|169293913|gb|EDS76046.1| DEAD/DEAH box helicase [Clostridium spiroforme DSM 1552]
          Length = 531

 Score =  203 bits (517), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 121/351 (34%), Positives = 195/351 (55%), Gaps = 12/351 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + + + +++ GF K S IQ  A P +L G DAI Q+++GTGK++ F    L+K+  + 
Sbjct: 11  LSEEVLKAIKDMGFSKPSQIQEKAIPILLTGVDAIGQAQTGTGKTLAFGSVLLSKIKPID 70

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQIVVG 143
            + PQ IIL+PTRE+A+QI + +  +G H  +  V  F GG+ +E+     K+ V IVVG
Sbjct: 71  DRFPQAIILSPTRELAMQIHEEMNRIGKHNGSKIVCVF-GGSDIEKQIRSIKKGVDIVVG 129

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  +++ K L  D+V+  ++DEAD+++N GFVEDI  I  ++   +Q ++ SAT  
Sbjct: 130 TPGRVMDLMRRKVLKFDNVKYVVLDEADEMLNMGFVEDIETILEKVDDARQTILFSATMP 189

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                  Q YM D       D     +  KQ  A   +     ++  D  + L +L+   
Sbjct: 190 AGIKKIAQNYMHD-------DFKHVAVLSKQTTATSVKQFYYEVKPKDRFETLCRLIDVA 242

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
                +IF   +   + + E +  +N+  E + G  +Q  R+ +L  FK+G +  LV TD
Sbjct: 243 NIKTGIIFCRTKRSVDEVTEQMQQSNYNVEAMHGDLNQNHRMNTLRKFKKGTINFLVATD 302

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +AARGID  NV  VIN E+P D  +Y+HR+GR GR    GL  +I+S + +
Sbjct: 303 VAARGIDVENVTHVINYELPQDIESYVHRIGRTGRADKEGLAYSIISPKEV 353


>gi|66363178|ref|XP_628555.1| eIF4A-1; eukaryotic translation initiation factor 4A-1; RNA SFII
           helicase [Cryptosporidium parvum Iowa II]
 gi|46229820|gb|EAK90638.1| eIF4A-1; eukaryotic translation initiation factor 4A-1; RNA SFII
           helicase [Cryptosporidium parvum Iowa II]
          Length = 396

 Score =  203 bits (517), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 125/374 (33%), Positives = 196/374 (52%), Gaps = 24/374 (6%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   ++ G D I+QS+SGTGK+ VF V AL    K     P  
Sbjct: 35  RGIYSYGFEFPSAIQRRAIVPIIQGRDTIIQSQSGTGKTCVFSVGALEICSKSKENVPMV 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVGSPGRIK 149
           +IL+PTRE+A Q   V  S+G ++ ++     IGG +++   +     V I+ G+PGR+ 
Sbjct: 95  LILSPTRELAEQSEKVCTSIGDYL-DIRAHSCIGGKKLKDDIKALNSGVSIISGTPGRVL 153

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
           QMI+  YL+   ++L I+DEAD++ + GF   +  IY  LPP  Q ++VSAT   D L  
Sbjct: 154 QMIEQGYLSTKKIKLLIIDEADEMFDYGFKTQVYDIYKYLPPRIQTVLVSATLPDDILVM 213

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQTPF 265
            QK+M +PL I        L  ++Q               V+EEK     L  L      
Sbjct: 214 AQKFMRNPLQILVPKEEVSLDKIRQYHV-----------QVEEEKWKFETLCDLYDTLTV 262

Query: 266 NQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLA 325
            Q +IF N + + E + + +   +F   ++ G   Q  R   L  F+ GK R+L+TTDL 
Sbjct: 263 TQSIIFCNTKNKVEWLSKKMMENHFTVSFVHGDLPQVTREEILREFREGKTRVLITTDLW 322

Query: 326 ARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEIN 385
            RGID   V+LV+N ++P +   Y+HR+GR+GR+G  G+ I +++ E      S++  + 
Sbjct: 323 GRGIDVQQVNLVVNYDLPINKELYIHRIGRSGRFGRSGIAINLITKED----ESMLSLLE 378

Query: 386 LDHAFNVGLVPDNL 399
             ++  +  +P N+
Sbjct: 379 RFYSIKISKLPGNV 392


>gi|3775985|emb|CAA09195.1| RNA helicase [Arabidopsis thaliana]
 gi|9294443|dbj|BAB02563.1| RNA helicase [Arabidopsis thaliana]
          Length = 391

 Score =  203 bits (517), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 200/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           ND+ I++ + +G+ E GF K S IQ  A   +L G D I Q++SGTGK+   +  ++ ++
Sbjct: 21  NDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKT-SMIALSVCQV 79

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQ 139
           +    ++ Q +IL+PTRE+A Q    ++++G H  N+     IGG  V    R     V 
Sbjct: 80  VDTSSREVQALILSPTRELATQTEKTIQAIGLH-ANIQAHACIGGNSVGEDIRKLEHGVH 138

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MIK + L   +++L I+DE+D++++ GF + I  +Y  LPP  Q+ +VS
Sbjct: 139 VVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVS 198

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  H+ L    K+M +P+ I  +     L G+KQ    + +          EE K   L
Sbjct: 199 ATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEK----------EEWKFDTL 248

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E + + NF    + G   QK R A ++ F+ G  
Sbjct: 249 CDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDS 308

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 309 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 366


>gi|289705155|ref|ZP_06501559.1| ATP-dependent RNA helicase DeaD family protein [Micrococcus luteus
           SK58]
 gi|289558183|gb|EFD51470.1| ATP-dependent RNA helicase DeaD family protein [Micrococcus luteus
           SK58]
          Length = 470

 Score =  203 bits (517), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 122/372 (32%), Positives = 200/372 (53%), Gaps = 28/372 (7%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  +   I + L+  G V   PIQ    P  L G+D I Q+K+GTGK++ F + AL + I
Sbjct: 41  DFGVHPKIVEALEAKGIVHPFPIQAMTLPVALGGHDIIGQAKTGTGKTLGFGIPALQRAI 100

Query: 85  ------------KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG---- 128
                       K     PQ +I+APTRE+AVQ+   + +  A  + L +    GG    
Sbjct: 101 GPGEPGWDALEAKGTAGAPQALIVAPTRELAVQVAGDLTAAAAR-RPLRIATIYGGRAYE 159

Query: 129 TQVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
            Q+E  +R ++IVVG+PGR+  +++ ++L +D V   ++DEAD++++ GF+ D+  + + 
Sbjct: 160 PQIEELQRGIEIVVGTPGRLIDLMRQRHLRLDLVNTVVLDEADEMLDLGFLPDVETLLAA 219

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR---PEDATRPLLGVKQLVALIPECKNP 245
           +P ++Q ++ SAT     +A  ++YM  P  IR   PED       ++QLV         
Sbjct: 220 VPAVRQTMLFSATMPGPVVAMARRYMTQPTHIRAADPEDEGLTKKDIRQLVY-------- 271

Query: 246 SLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              ++D+++ + + L      + +IF+  +     + + L    F A  L G   Q AR 
Sbjct: 272 RAHHMDKDELVARALQAEGRGRTIIFTRTKRTAARVADELTARGFAAGALHGDLGQGARE 331

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
            +L +F+ GKV ILV TD+AARGID  +V  V N + P D  TY+HR+GR GR G +G+ 
Sbjct: 332 QALRAFRNGKVDILVATDVAARGIDVDDVTHVFNFQAPEDEKTYVHRVGRTGRAGNKGVA 391

Query: 366 ITIVSAESLVKF 377
           +T+V  E + ++
Sbjct: 392 VTLVDWEDMPRW 403


>gi|167761792|ref|ZP_02433919.1| hypothetical protein BACSTE_00133 [Bacteroides stercoris ATCC
           43183]
 gi|167700298|gb|EDS16877.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
          Length = 372

 Score =  203 bits (517), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 112/353 (31%), Positives = 196/353 (55%), Gaps = 13/353 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL- 83
           D+ I +PI + ++E G+   +PIQ+ A P  L G D +  +++GTGK+  F +  +  L 
Sbjct: 5   DLNITEPILKAIEEKGYANPTPIQVKAIPAALTGKDILGCAQTGTGKTAAFAIPIIQHLQ 64

Query: 84  -IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQ 139
            +K   +  + +IL PTRE+A+QI++ +     + +  H   F G     QV    + V 
Sbjct: 65  VLKNRDKSIKALILTPTRELALQISECIDDYAKYTQVRHGVIFGGVNQRAQVNMLHKGVD 124

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           I+V +PGR+  ++   Y+++D+VR F++DEAD++++ GF+ DI  +  +LP  KQ L  S
Sbjct: 125 ILVATPGRLLDLMNQGYIHLDNVRHFVLDEADRMLDMGFIHDIKRLLPKLPKEKQTLFFS 184

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +A     +  P+ I     +  +  ++Q +  + +         ++ K L+ +
Sbjct: 185 ATMPDTIIALTNSLLKQPVKITITPKSSTVDTIEQTIYFVEK--------KEKSKLLISI 236

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L +T     ++FS  +   + I   L+ A  G++ + G + Q AR ++L++FK GK+R++
Sbjct: 237 LHKTEGQSVLVFSRTKHNADRIVRVLSKAGIGSQAIHGNKSQNARQSALENFKTGKIRVM 296

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           + TD+AARGID   + LVIN ++P    TY+HR+GR GR G  G  +T  S E
Sbjct: 297 IATDIAARGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNLGTALTFCSQE 349


>gi|58265490|ref|XP_569901.1| RNA helicase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134108933|ref|XP_776581.1| hypothetical protein CNBC0740 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|338818073|sp|P0CQ81.1|DHH1_CRYNB RecName: Full=ATP-dependent RNA helicase DHH1
 gi|338818074|sp|P0CQ80.1|DHH1_CRYNJ RecName: Full=ATP-dependent RNA helicase DHH1
 gi|50259261|gb|EAL21934.1| hypothetical protein CNBC0740 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226133|gb|AAW42594.1| RNA helicase, putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 625

 Score =  203 bits (517), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 203/387 (52%), Gaps = 21/387 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +     FE D  + + +  G+   GF + SPIQ  A P  L G D + ++K+GT
Sbjct: 26  QTEDVTATQGSRFE-DFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGT 84

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  LN+ I   +   Q +IL PTRE+A+Q + V +++GAH+ NL V    GGT
Sbjct: 85  GKTASFIIPTLNR-INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGT 143

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R ++PV I+VG+PGRI  +      +++   +F+MDEADKL++  F+  I   
Sbjct: 144 TLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQT 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            +  P  +Q+++ SAT+         ++MV P  I   D    L GV Q  A        
Sbjct: 204 LALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEINLMDEL-TLKGVTQYYA-------- 254

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              YV+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 255 ---YVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMQQA 311

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV +DL  RGID   V++VIN + P  A +YLHR+GR+GR+G  
Sbjct: 312 HRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYLHRIGRSGRFGHL 371

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHA 389
           GL I++++ E     + +  E+  + A
Sbjct: 372 GLAISLLTLEDRHNLYRIESELGTEIA 398


>gi|423687698|ref|ZP_17662501.1| cold-shock deAd box protein a [Vibrio fischeri SR5]
 gi|371493481|gb|EHN69084.1| cold-shock deAd box protein a [Vibrio fischeri SR5]
          Length = 636

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 122/372 (32%), Positives = 199/372 (53%), Gaps = 20/372 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ I   L + GFV  +PIQ A+ P +L G DA+ ++++GTGK+  F +  LNK I L 
Sbjct: 13  LDESILSALDDMGFVAPTPIQAASIPLLLEGRDALGKAQTGTGKTAAFSLPLLNK-INLK 71

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
              PQ II+APTRE+A+Q+   V+++G ++K L V    GG     Q+    R   I+VG
Sbjct: 72  QHNPQAIIMAPTRELAIQVAAEVKNLGRNIKGLKVLEIYGGASIVDQMRALSRGAHIIVG 131

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+K ++    LN+  V  FI+DEAD+++  GFV+D+TWI  + P   Q ++ SAT  
Sbjct: 132 TPGRVKDLLNRDRLNLGEVHTFILDEADEMLKMGFVDDVTWILEKAPDTAQRILFSATMP 191

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                 + +Y+ DP  +        +  V+Q   ++        + V++++ + +LL   
Sbjct: 192 PMVKTIVDRYLRDPARVDVAGTNHTVDKVEQNFWVV--------KGVEKDEAMSRLLETE 243

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
             +  ++F   +   E + + L+   F A  L G   Q  R  ++D+ K G + ILV TD
Sbjct: 244 ETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSQRERTVDNIKNGVIDILVATD 303

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL--- 380
           + ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    ++   
Sbjct: 304 VVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQMRMLRTIERV 363

Query: 381 ----MGEINLDH 388
               M EI L H
Sbjct: 364 TKSTMEEIQLPH 375


>gi|302839493|ref|XP_002951303.1| hypothetical protein VOLCADRAFT_120953 [Volvox carteri f.
           nagariensis]
 gi|300263278|gb|EFJ47479.1| hypothetical protein VOLCADRAFT_120953 [Volvox carteri f.
           nagariensis]
          Length = 414

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 187/349 (53%), Gaps = 25/349 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF K S IQ         G D I Q++SGTGK+  F    LN L    + + Q 
Sbjct: 54  RGIYAYGFEKPSAIQAKGIVPFTKGLDVIQQAQSGTGKTATFCAGILNNL-DYNLNECQA 112

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR----PVQIVVGSPGRIK 149
           ++LAPTRE+A QI  V+R++G  ++ +     +GGT V    R     VQ+VVG+PGR+ 
Sbjct: 113 LVLAPTRELAQQIEKVMRALGDFLQ-VKCHACVGGTSVREDARILGAGVQVVVGTPGRVF 171

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            M++ +YL  D++++F++DEAD++++ GF + I  I+  LPP  Q+ V SAT   + L  
Sbjct: 172 DMLRRRYLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKLQVGVFSATLPPEALEI 231

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLLSQT 263
            +K+M  P+ I  +     L G+KQ              YVD +K+      L  L    
Sbjct: 232 TRKFMNKPVRILVKRDELTLEGIKQF-------------YVDVDKEEWKLDTLCDLYETL 278

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF+N + + + + E +   +       G  +Q AR   +  F+ G  R+L+TTD
Sbjct: 279 AITQSVIFANTRRKVDWLTEKMRERDHTVSATHGDMEQNARDVIMREFRSGSSRVLITTD 338

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           L ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  +  E
Sbjct: 339 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFIVKE 387


>gi|197337466|ref|YP_002157976.1| cold-shock deAd box protein a [Vibrio fischeri MJ11]
 gi|197314718|gb|ACH64167.1| cold-shock deAd box protein a [Vibrio fischeri MJ11]
          Length = 640

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 122/372 (32%), Positives = 199/372 (53%), Gaps = 20/372 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ I   L + GFV  +PIQ A+ P +L G DA+ ++++GTGK+  F +  LNK I L 
Sbjct: 13  LDESILSALDDMGFVAPTPIQAASIPLLLEGRDALGKAQTGTGKTAAFSLPLLNK-INLK 71

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
              PQ II+APTRE+A+Q+   V+++G ++K L V    GG     Q+    R   I+VG
Sbjct: 72  QHNPQAIIMAPTRELAIQVAAEVKNLGRNIKGLKVLEIYGGASIVDQMRALSRGAHIIVG 131

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+K ++    LN+  V  FI+DEAD+++  GFV+D+TWI  + P   Q ++ SAT  
Sbjct: 132 TPGRVKDLLNRDRLNLGEVHTFILDEADEMLKMGFVDDVTWILEKAPDTAQRILFSATMP 191

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                 + +Y+ DP  +        +  V+Q   ++        + V++++ + +LL   
Sbjct: 192 PMVKTIVDRYLRDPARVDVAGTNHTVDKVEQNFWVV--------KGVEKDEAMSRLLETE 243

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
             +  ++F   +   E + + L+   F A  L G   Q  R  ++D+ K G + ILV TD
Sbjct: 244 ETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSQRERTVDNIKNGVIDILVATD 303

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL--- 380
           + ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +    ++   
Sbjct: 304 VVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQMRMLRTIERV 363

Query: 381 ----MGEINLDH 388
               M EI L H
Sbjct: 364 TKSTMEEIQLPH 375


>gi|303289024|ref|XP_003063800.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454868|gb|EEH52173.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 425

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 128/356 (35%), Positives = 191/356 (53%), Gaps = 18/356 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D I Q+KSG GK+ VFV+A L +L 
Sbjct: 48  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLAVLQQLE 107

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK-----RPVQ 139
            +P  +   +IL  TRE+A QI         ++ N++V    GG  +++ K     +P  
Sbjct: 108 PVP-GEIGALILCHTRELAYQIMHEFERFSVYLPNVNVSVVFGGVNIKQQKEELEAKPPS 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           +VV +PGR+K + K   L++     FI+DE DK++       D+  I+   P  KQ+++ 
Sbjct: 167 VVVATPGRLKALAKDGSLSLKQCGHFILDECDKMLEQLDMRSDVQEIFKMTPHDKQVMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLG--VKQLVALIPECKNPSLRYVDEEKKL 256
           SAT S +     +K+M DP+ I  +D T+  L   V+  + L    KN         +KL
Sbjct: 227 SATLSKEIRPVCKKFMNDPMEIYVDDETKLTLHGLVQHYIKLQEGEKN---------RKL 277

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RLA   SFK G  
Sbjct: 278 NDLLDALMFNQVVIFVKSVQRCTYLDKLLTECNFPSIAIHRGMSQEERLARYKSFKEGHK 337

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           RILV TDL ARGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT ++++
Sbjct: 338 RILVATDLVARGIDIERVNIVINYDMPDGADTYLHRVGRAGRFGTKGLAITFIASD 393


>gi|67623509|ref|XP_668037.1| eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
           [Cryptosporidium hominis TU502]
 gi|54659212|gb|EAL37800.1| eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
           [Cryptosporidium hominis]
          Length = 395

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 125/374 (33%), Positives = 196/374 (52%), Gaps = 24/374 (6%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   ++ G D I+QS+SGTGK+ VF V AL    K     P  
Sbjct: 34  RGIYSYGFEFPSAIQRRAIVPIIQGRDTIIQSQSGTGKTCVFSVGALEICSKSKENVPMV 93

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVGSPGRIK 149
           +IL+PTRE+A Q   V  S+G ++ ++     IGG +++   +     V I+ G+PGR+ 
Sbjct: 94  LILSPTRELAEQSEKVCTSIGDYL-DIRTHSCIGGKKLKDDIKAFNSGVSIISGTPGRVL 152

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
           QMI+  YL+   ++L I+DEAD++ + GF   +  IY  LPP  Q ++VSAT   D L  
Sbjct: 153 QMIEQGYLSTKKIKLLIIDEADEMFDYGFKTQVYDIYKYLPPRIQTVLVSATLPDDILVM 212

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQTPF 265
            QK+M +PL I        L  ++Q               V+EEK     L  L      
Sbjct: 213 AQKFMRNPLQILVPKEEVSLDKIRQYHV-----------QVEEEKWKFETLCDLYDTLTV 261

Query: 266 NQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLA 325
            Q +IF N + + E + + +   +F   ++ G   Q  R   L  F+ GK R+L+TTDL 
Sbjct: 262 TQSIIFCNTKNKVEWLSKKMMENHFTVSFVHGDLPQVTREEILREFREGKTRVLITTDLW 321

Query: 326 ARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEIN 385
            RGID   V+LV+N ++P +   Y+HR+GR+GR+G  G+ I +++ E      S++  + 
Sbjct: 322 GRGIDVQQVNLVVNYDLPINKELYIHRIGRSGRFGRSGIAINLITKED----ESMLSLLE 377

Query: 386 LDHAFNVGLVPDNL 399
             ++  +  +P N+
Sbjct: 378 RFYSIKISKLPGNV 391


>gi|365982301|ref|XP_003667984.1| hypothetical protein NDAI_0A05860 [Naumovozyma dairenensis CBS 421]
 gi|343766750|emb|CCD22741.1| hypothetical protein NDAI_0A05860 [Naumovozyma dairenensis CBS 421]
          Length = 399

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 127/377 (33%), Positives = 205/377 (54%), Gaps = 28/377 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   ++ G D I Q++SGTGK+  F +  L ++I    +Q Q 
Sbjct: 36  KGIYSYGFESPSSIQSRAITRIIAGNDVIAQAQSGTGKTATFTIGML-QIIDSDKKQLQG 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP-----KRPVQIVVGSPGRI 148
           +IL+PTRE+AVQI  VV ++G ++ N+     IGG  ++       K    ++ G+PGRI
Sbjct: 95  LILSPTRELAVQINQVVGNLGDYM-NVKSMAMIGGKMMKEDLKKINKNSCHVISGTPGRI 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + LN+ ++++ ++DEAD+L++   GF + I  I+++LP   Q++VVSAT   + 
Sbjct: 154 LDMIKRQLLNVRNIQILVLDEADELLSEILGFKQQIYDIFAKLPKSCQVVVVSATMDKNI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K+M DP+ I  +     L G+KQ +             VD+E      L  +   
Sbjct: 214 LEITKKFMNDPVKILVKQDEISLEGIKQYIV-----------NVDKEDWKFDTLCDIYDS 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + +   LA ANF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLSAKLAQANFAVVSMHGDMKQEDRDKVMNDFRTGHSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  ++        S + 
Sbjct: 323 DVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFGRKGVAINFITKSD----GSTLK 378

Query: 383 EINLDHAFNVGLVPDNL 399
           EI   +   +  +P NL
Sbjct: 379 EIERFYHIKINPMPANL 395


>gi|154313296|ref|XP_001555974.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
 gi|160380642|sp|A6RY31.1|DHH1_BOTFB RecName: Full=ATP-dependent RNA helicase dhh1
 gi|347827091|emb|CCD42788.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 538

 Score =  203 bits (516), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 208/397 (52%), Gaps = 22/397 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FE D  I++ +  G+ E G+ K SPIQ  A P  L G D + ++K+GT
Sbjct: 37  QTEDVTATKGLEFE-DFSIKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL + I     + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 96  GKTAAFVIPALER-INPKNTKVQCLILVPTRELALQTSQVCKTLGQHL-GINVMVTTGGT 153

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV I+VG+PGRI  +      ++    +F+MDEADKL++  F   I  +
Sbjct: 154 TLRDDILRLQEPVHIIVGTPGRILDLAGKNVADLSECNMFVMDEADKLLSPEFTIVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K M DP  I   D    L G+ Q  A        
Sbjct: 214 LQFHPKDRQIMLFSATFPMTVKDFSDKNMADPYEINLMDELT-LRGITQFYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 265 ---FVEEKEKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMIQA 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GR+G  
Sbjct: 322 NRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHL 381

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           GL I ++S E     +++  E+  + A    ++P NL
Sbjct: 382 GLAINLISWEDRFNLYNIERELGTEIAPIPQIIPKNL 418


>gi|224368898|ref|YP_002603060.1| protein RhlE1 [Desulfobacterium autotrophicum HRM2]
 gi|223691615|gb|ACN14898.1| RhlE1 [Desulfobacterium autotrophicum HRM2]
          Length = 427

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 194/354 (54%), Gaps = 16/354 (4%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKL- 86
           +  PI + +   G+   SPIQ+ A P VL G D +  +++GTGK++VF +  L +L KL 
Sbjct: 27  LSAPIVKAVAGQGYETPSPIQVRAIPAVLKGRDVMAAAQTGTGKTLVFTLPVLERLSKLA 86

Query: 87  PVQ--QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
           PVQ  Q + ++L PTRE+AVQI + V + G H+ +L      GG     Q+ + +  V +
Sbjct: 87  PVQANQVRALVLVPTRELAVQIGESVTTFGRHL-HLRSTAVFGGVKINPQMMKLRGGVDV 145

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +V +PGR+  +     +  D + + ++DEAD+++N GF+ DI  I + LP  +Q L+ SA
Sbjct: 146 LVATPGRLLDLHSKNAVKFDRLEVLVLDEADRMLNMGFIHDIGKIIALLPNQRQTLMFSA 205

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T+  +     +  + DP+ I        L  +KQ V  + + K  +L        L +L+
Sbjct: 206 TFPDEIRDLARGLLHDPVEISVAPPNSVLKIIKQWVYPVDQNKKSAL--------LSKLI 257

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
               + Q ++FS  +   + +  +L      A  + G + Q AR  +L++FK+G VRILV
Sbjct: 258 CDNQWEQVLVFSKTKNGADRLVRHLEKEGIDAAAIHGDKSQGARTKALENFKKGTVRILV 317

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
            TD+AARG+D   +  V+N ++PH    Y+H MGR GR G  G VI++V A+  
Sbjct: 318 ATDIAARGLDIYQLPQVVNFDLPHVKEDYVHLMGRTGRAGAPGQVISLVCADEF 371


>gi|15230945|ref|NP_188610.1| DEAD-box ATP-dependent RNA helicase 2 [Arabidopsis thaliana]
 gi|109893655|sp|Q94A52.2|RH2_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 2
 gi|332642762|gb|AEE76283.1| DEAD-box ATP-dependent RNA helicase 2 [Arabidopsis thaliana]
          Length = 408

 Score =  203 bits (516), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 200/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           ND+ I++ + +G+ E GF K S IQ  A   +L G D I Q++SGTGK+   +  ++ ++
Sbjct: 38  NDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKT-SMIALSVCQV 96

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQ 139
           +    ++ Q +IL+PTRE+A Q    ++++G H  N+     IGG  V    R     V 
Sbjct: 97  VDTSSREVQALILSPTRELATQTEKTIQAIGLH-ANIQAHACIGGNSVGEDIRKLEHGVH 155

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MIK + L   +++L I+DE+D++++ GF + I  +Y  LPP  Q+ +VS
Sbjct: 156 VVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVS 215

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  H+ L    K+M +P+ I  +     L G+KQ    + +          EE K   L
Sbjct: 216 ATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEK----------EEWKFDTL 265

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E + + NF    + G   QK R A ++ F+ G  
Sbjct: 266 CDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDS 325

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 326 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 383


>gi|291237406|ref|XP_002738626.1| PREDICTED: HLA-B associated transcript 1-like [Saccoglossus
           kowalevskii]
          Length = 429

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 209/383 (54%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  +   D + Q+KSG GK+ VFV+A L ++ 
Sbjct: 51  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQI- 109

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++  + V  F GG  +++ ++ ++    
Sbjct: 110 -EPVDGQVSVLVLCHTRELAFQIAKEYERFSKYMPTIKVGVFFGGINIKKDEQTLKNNCP 168

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGR+  + + K L++  V+ FI+DE DK++       D+  I+ Q P  KQ+++
Sbjct: 169 HIVVGTPGRLLALGRNKTLSLKHVKHFILDECDKMLEQLDMRRDVQDIFRQTPHEKQVMM 228

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S D     +K+M DP+ +  +D T+  L G++Q       CK   L+  ++ +KL
Sbjct: 229 FSATLSKDIRPICKKFMQDPMEVYVDDETKLTLHGLQQYY-----CK---LKDNEKNRKL 280

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +  A +Q+ RLA    FK  + 
Sbjct: 281 FDLLDVLEFNQVVIFVKSVQRCIALSQLLVEQNFPAIAIHRAMNQEERLARYQQFKDFQK 340

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 341 RILVATNLFGRGMDIERVNIVFNYDMPEDSNTYLHRVARAGRFGTKGLAITFVSDENDAK 400

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ E+      N+G +PD +
Sbjct: 401 ---ILNEVQDRFEVNIGELPDEI 420


>gi|269104706|ref|ZP_06157402.1| cold-shock DEAD-box protein A [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161346|gb|EEZ39843.1| cold-shock DEAD-box protein A [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 647

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 132/417 (31%), Positives = 217/417 (52%), Gaps = 34/417 (8%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
            L + GFV  +PIQ A+ P +L G DA+ ++++GTGK+  F +  LNKL KL   +PQ I
Sbjct: 20  ALDKMGFVAPTPIQAASIPLLLTGTDALGKAQTGTGKTAAFSLPLLNKL-KLSQHKPQAI 78

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGRIKQ 150
           ++APTRE+A+Q+   V+++G +++ L V    GG     Q+   K    IVVG+PGR+K 
Sbjct: 79  VMAPTRELAIQVAAEVKTLGQNIQGLKVLEIYGGASIVDQMRALKNGAHIVVGTPGRVKD 138

Query: 151 MIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATL 210
           +I    L++D V  F++DEAD+++  GFV+D+TWI  Q P   Q ++ SAT        +
Sbjct: 139 LITRDRLHLDEVHTFVLDEADEMLKMGFVDDVTWIMEQAPETAQRVLFSATMPPIVKEIV 198

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
            +++ +P  I      R +  V Q   ++        + V++++ +++LL     +  ++
Sbjct: 199 DRFLRNPARIDVAGENRTVAKVDQQFWVV--------KGVEKDEAMMRLLETEDTDASIV 250

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           F   +   E + + L    F A  L G   Q  R  +++  KRG + ILV TD+ ARG+D
Sbjct: 251 FVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVEHIKRGVIDILVATDVVARGLD 310

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL-------MGE 383
              +  V N +IP D  +Y+HR+GR GR G  G  I +V    +    ++       M E
Sbjct: 311 VPRITHVFNYDIPFDVESYIHRIGRTGRAGREGKAILLVRTNQIRMLRTIERVTKSRMEE 370

Query: 384 INLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVEQTAEESSKVENT 440
           I L        + D +   ++N        LAK L+  +E+  VE   E   K++ +
Sbjct: 371 IQLP-------LRDAVAEARLN-------RLAKELEAQKEQSSVEAFVELVEKLQES 413


>gi|6468270|emb|CAB61567.1| ATP-dependent RNA helicase [Candida albicans]
          Length = 399

 Score =  203 bits (516), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 199/356 (55%), Gaps = 14/356 (3%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I    
Sbjct: 34  KPDLLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML-EVIDTKS 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGS 144
           ++ Q +IL+PTRE+A+QI +VV  +G ++ N+H    IGG  V    ++ ++  QIV G+
Sbjct: 93  KECQALILSPTRELAIQIQNVVMHLGDYM-NIHTHACIGGKNVGEDVKKLQQGQQIVSGT 151

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  +IK + L   ++++ I+DEAD+L   GF E I  IY  LPP  Q++VVSAT   
Sbjct: 152 PGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQVVVVSATLPR 211

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
           + L    K+  DP+ I  +     L G+KQ      +C+    ++      L  L     
Sbjct: 212 EVLEMTSKFTTDPVKILVKRDEISLSGIKQYYV---QCEREDWKF----DTLCDLYDNLT 264

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             Q VIF N +L+   + + +   NF    + G   Q  R + ++ F+RG  R+L++TD+
Sbjct: 265 ITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDV 324

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G  I +++ + +V    L
Sbjct: 325 WARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEL 380


>gi|431798400|ref|YP_007225304.1| DNA/RNA helicase [Echinicola vietnamensis DSM 17526]
 gi|430789165|gb|AGA79294.1| DNA/RNA helicase, superfamily II [Echinicola vietnamensis DSM
           17526]
          Length = 567

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 116/351 (33%), Positives = 196/351 (55%), Gaps = 13/351 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I   I Q ++  G+ + S IQ  + P +L G+D I Q+++GTGK+  F +  +++ +
Sbjct: 9   DLGISAEILQAVEGMGYTQPSEIQAQSIPLMLEGHDVIGQAQTGTGKTASFGIPIVDR-V 67

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQI 140
               +QPQ +IL PTRE+AVQ+   +  +  + K +      GG  ++R     KR VQI
Sbjct: 68  DSSSKQPQALILCPTRELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRTLKRGVQI 127

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   +    L +D+V+  ++DEAD++++ GF EDI  + SQ+P  +Q +  SA
Sbjct: 128 VVGTPGRVMDHMNRGTLKLDTVKTIVLDEADEMLDMGFREDIETVLSQMPEDRQTIFFSA 187

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T +   +   +KY  +P +++ +   R  L V+ +  +  E K P      + + + +L+
Sbjct: 188 TMAKPIMDLTRKYQTNPEIVKIQ---RKELTVENISQVYYEVKPPL-----KMELITRLI 239

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
           +   FN  V+F N +   + + E L      AE L G   Q  R   ++ F++G   +LV
Sbjct: 240 NIHQFNLGVVFCNTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLV 299

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
            TD+AARGID  NV++V N ++P D   Y+HR+GR GR G  G+ I+ ++ 
Sbjct: 300 ATDVAARGIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFITG 350


>gi|15221761|ref|NP_175829.1| translation initiation factor 4A-2 [Arabidopsis thaliana]
 gi|1170505|sp|P41377.1|IF4A2_ARATH RecName: Full=Eukaryotic initiation factor 4A-2; Short=eIF-4A-2;
           AltName: Full=ATP-dependent RNA helicase eIF4A-2;
           AltName: Full=DEAD-box ATP-dependent RNA helicase 19
 gi|4585969|gb|AAD25605.1|AC005287_7 Eukaryotic Initiation Factor 4A-2 [Arabidopsis thaliana]
 gi|14423372|gb|AAK62368.1|AF386923_1 Eukaryotic Initiation Factor 4A-2 [Arabidopsis thaliana]
 gi|16226681|gb|AAL16231.1|AF428462_1 At1g54270/F20D21_52 [Arabidopsis thaliana]
 gi|16556|emb|CAA46189.1| eukaryotic translation initiation factor 4A-2 [Arabidopsis
           thaliana]
 gi|21593545|gb|AAM65512.1| eukaryotic translation initiation factor 4A, putative [Arabidopsis
           thaliana]
 gi|30725682|gb|AAP37863.1| At1g54270 [Arabidopsis thaliana]
 gi|110740791|dbj|BAE98493.1| Eukaryotic Initiation Factor 4A-2 [Arabidopsis thaliana]
 gi|332194952|gb|AEE33073.1| translation initiation factor 4A-2 [Arabidopsis thaliana]
          Length = 412

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 199/382 (52%), Gaps = 34/382 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           R  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  RLNEVLDGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G + + +
Sbjct: 79  VIQQAQSGTGKTATFCSGVLQQL-DYALLQCQALVLAPTRELAQQIEKVMRALGDY-QGV 136

Query: 121 HVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R +Q    +VVG+PGR+  M++ + L  D +++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 364 HRIGRSGRFGRKGVAINFVTLD 385


>gi|402759618|ref|ZP_10861874.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. NCTC 7422]
          Length = 383

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 113/354 (31%), Positives = 201/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PV++ 
Sbjct: 14  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPVKEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    +++     NLH+   +GG   E+ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAQAL-TKFSNLHLVTLLGGVDFEKQKKMLDRNFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 133 IVATPGRLIDFVEQKEVWLDKIEFLVIDEADRLLDMGFIPSVKRIVRYSPFKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ K L +
Sbjct: 193 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAK--------QDKYKLLQE 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  LD FK+GK  I
Sbjct: 245 ILREEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQGKNNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  VIN  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|156057455|ref|XP_001594651.1| eukaryotic initiation factor 4A [Sclerotinia sclerotiorum 1980]
 gi|160395529|sp|A7EGL7.1|IF4A_SCLS1 RecName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=Translation initiation factor 1
 gi|154702244|gb|EDO01983.1| eukaryotic initiation factor 4A [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 398

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 141/396 (35%), Positives = 217/396 (54%), Gaps = 31/396 (7%)

Query: 16  SNIDVLFEN-DVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSI 73
           SN D   ++ D +  KP + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+ 
Sbjct: 18  SNYDETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTA 77

Query: 74  VFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER 133
            F ++ L KL    V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V  
Sbjct: 78  TFSISVLQKL-DPNVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVRD 135

Query: 134 PKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQL 189
             + +Q    +VVG+PGR+  MI+ ++L  DS+++F++DEAD++++ GF E I  I+  L
Sbjct: 136 DMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLL 195

Query: 190 PPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRY 249
           P   Q++++SAT   D L    K+M DP+ I  + A   L G+KQ              Y
Sbjct: 196 PQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKAELTLEGIKQF-------------Y 242

Query: 250 VDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
           +  EK+      L  L       Q VIF N + + + + + L   +F    + G  DQ  
Sbjct: 243 IAVEKEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQ 302

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R   +  F+ G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G
Sbjct: 303 RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG 362

Query: 364 LVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           + I  V+AE +     +M EI   ++  +  +P N+
Sbjct: 363 VAINFVTAEDV----RMMREIEQFYSTQIEEMPMNV 394


>gi|255072433|ref|XP_002499891.1| predicted protein [Micromonas sp. RCC299]
 gi|226515153|gb|ACO61149.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  203 bits (516), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 123/354 (34%), Positives = 191/354 (53%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +GL   GF K S IQ  A   + +G D I Q++SGTGK+   +  AL +++   
Sbjct: 28  IREDLLRGLYSYGFEKPSAIQQRAIVPITSGRDVIAQAQSGTGKT-SMISLALCQMLDTN 86

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q ++L+PTRE+A Q      ++G +  ++ V   IGG  +    R     V IV G
Sbjct: 87  TREVQALVLSPTRELATQTEKTALALG-NFMSVQVHACIGGRSIGEDIRKLDHGVHIVSG 145

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++  I+DEAD+++N GF E I  +Y  LPP  Q+++VSAT  
Sbjct: 146 TPGRVFDMIKRRNLRTRNIKALILDEADEMLNKGFKEQIYDVYRYLPPETQVVLVSATLP 205

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            + L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 206 QEVLEMTTKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 255

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + + +   NF    + G   QK R A +  F+ G  R+L+
Sbjct: 256 DTLTITQAVIFCNTKRKVDWLTDKMRQNNFTVSSMHGDMPQKERDAIMGEFRGGTTRVLI 315

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GRYG +G+ I  V A+ +
Sbjct: 316 TTDVWARGIDVQQVSLVINYDLPNNRENYIHRIGRSGRYGRKGVAINFVKADDV 369


>gi|300113218|ref|YP_003759793.1| DEAD/DEAH box helicase [Nitrosococcus watsonii C-113]
 gi|299539155|gb|ADJ27472.1| DEAD/DEAH box helicase domain protein [Nitrosococcus watsonii
           C-113]
          Length = 500

 Score =  202 bits (515), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 110/347 (31%), Positives = 191/347 (55%), Gaps = 13/347 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I  PI Q +++ G+   + IQ  A P++L G+D + Q+++GTGK+  F +  L +L +L 
Sbjct: 15  ISAPILQAIKQVGYETPTLIQARAIPHLLAGHDLVGQAQTGTGKTAAFAIPTLERL-ELS 73

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVG 143
            ++PQ ++L PTRE+A+Q+ +  +S   H+++ HV    GG     Q+ + KR   ++VG
Sbjct: 74  RREPQALVLVPTRELAIQVAEAFQSYARHLEDFHVLPIYGGQSMGNQLRQLKRGAHVIVG 133

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGRI   ++ K L + ++   I+DEAD+++  GF+ED+ WI  Q+P  +Q+ + SAT  
Sbjct: 134 TPGRIMDHLRRKSLILTTLTTVILDEADEMLKMGFIEDVEWILKQVPTKRQVALFSATMP 193

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
                   +++  P  I+ +  T  L  + Q   L+       L  +D    L ++L   
Sbjct: 194 TSVRNIASRHLHAPQDIKIKGKTASLPAINQRYWLVS-----GLHKLD---ALTRMLEAE 245

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
            ++  +IF   ++  E + + L    + A  L+G   Q +R   +D  K+  + I+V TD
Sbjct: 246 EYDATIIFVRTKIATEELAKKLTARGYAAAALNGDMPQSSREKVVDQLKKNTIDIIVATD 305

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   +  V+N +IP+D  TY+HR+GR GR G  G     V+
Sbjct: 306 VAARGLDVKRIGHVVNYDIPYDTGTYIHRIGRTGRAGRTGTATLFVA 352


>gi|296421505|ref|XP_002840305.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636520|emb|CAZ84496.1| unnamed protein product [Tuber melanosporum]
          Length = 472

 Score =  202 bits (515), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 142/396 (35%), Positives = 216/396 (54%), Gaps = 31/396 (7%)

Query: 16  SNIDVLFEN-DVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSI 73
           SN D   +N D +  KP + +G+   GF + S IQ  A   V+N  D I Q++SGTGK+ 
Sbjct: 92  SNYDETVDNFDSMDLKPELLRGIYAYGFERPSAIQQRAILPVINNRDVIAQAQSGTGKTA 151

Query: 74  VFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER 133
            F ++ L K I L V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V  
Sbjct: 152 TFSISVLQK-IDLSVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTVVRE 209

Query: 134 PKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQL 189
             + +Q    +VVG+PGR+  +I+ + L  D+++LF++DEAD++++ GF E I  I+  L
Sbjct: 210 DMKILQDGVHVVVGTPGRVHDVIQRRALKTDAIKLFVLDEADEMLSRGFTEQIYDIFQLL 269

Query: 190 PPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRY 249
           P   Q++++SAT   D L    K+M DP+ I  + A   L G+KQ              Y
Sbjct: 270 PQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKAELTLEGIKQF-------------Y 316

Query: 250 VDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
           +  EK+      L  L       Q VIF N + + + + E L   +F    + G  DQ  
Sbjct: 317 IAVEKEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTEKLTARDFTVSAMHGDMDQHQ 376

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R   +  F+ G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G
Sbjct: 377 RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG 436

Query: 364 LVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           + I  V+A+ +     +M EI   ++  +  +P N+
Sbjct: 437 VAINFVTADDV----RMMREIEQFYSTQIEEMPMNV 468


>gi|1170507|sp|P41380.1|IF4A3_NICPL RecName: Full=Eukaryotic initiation factor 4A-3; Short=eIF-4A-3;
           AltName: Full=ATP-dependent RNA helicase eIF4A-3
 gi|19699|emb|CAA43514.1| nicotiana eukaryotic translation initiation factor 4A [Nicotiana
           plumbaginifolia]
          Length = 391

 Score =  202 bits (515), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 195/354 (55%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+ + GF K S IQ  A   +++G D I Q++SGTGK+ + +   + +++   
Sbjct: 25  IKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSM-IALTVCQIVDTK 83

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
             + Q +IL+PTRE+A Q   V+ ++G ++ N+     IGG  V    R     VQ+V G
Sbjct: 84  SSEVQALILSPTRELAAQTEKVILAIGDYI-NVQAHACIGGKSVGEDIRKLEHGVQVVSG 142

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L    ++L I+DE+D++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 143 TPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 202

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 203 NEILEITSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 252

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +   NF    + G   QK R A +  F+ G  R+L+
Sbjct: 253 DTLTITQAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKERDAIMAEFRGGTTRVLI 312

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 313 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 366


>gi|421779191|ref|ZP_16215685.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis RH4]
 gi|407813632|gb|EKF84412.1| putative ATP-dependent DEAD/DEAH box RNA-helicase [Moraxella
           catarrhalis RH4]
          Length = 581

 Score =  202 bits (515), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 193/359 (53%), Gaps = 24/359 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + KPI + L ++G+   +PIQ  A P+ LNG D ++ +++G+GK+  FV+  L+K+
Sbjct: 21  SDLGLNKPILKALTKSGYTTPTPIQAKAIPHALNGRDLLLSAQTGSGKTAAFVLPVLDKM 80

Query: 84  IKLPV--QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRP 137
            + P   +  Q +IL PTRE+A+Q+ D VR  G  + N+     +GG     Q+   K+ 
Sbjct: 81  SRKPTIEKHVQALILTPTRELALQVQDSVRRYGDGMCNMFSVPLVGGAPYGGQLRALKKG 140

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQ+++ +PGR+   ++   +++  + + I+DEAD++++ GF +DI  I    P  +Q ++
Sbjct: 141 VQVIIATPGRLIDHMREGRVDLSKLDMLILDEADRMLDMGFADDIKEILQNTPQTRQTVM 200

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE----E 253
            SAT+        + + V+P            + +K   A I E    S+ Y D+     
Sbjct: 201 SSATWDGAVGKIAESFTVNP----------EKVSIKVESAHIDE----SVYYCDDFNHKN 246

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L+Q+L+     Q VIF+  ++  E +   L  A F A YL G   Q  R   +   K 
Sbjct: 247 NILLQVLNNPKIKQAVIFAATKMSTEKLAAQLVEAGFKARYLHGDLPQGKRNRIVSDMKS 306

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           GK  +LV TD+AARGID + +  VIN ++P     Y+HR+GR GR G  G+ + + S +
Sbjct: 307 GKCDVLVATDVAARGIDISAISHVINYDLPRQVEDYVHRIGRCGRAGRTGVAVNLCSID 365


>gi|308177940|ref|YP_003917346.1| ATP-dependent RNA helicase [Arthrobacter arilaitensis Re117]
 gi|307745403|emb|CBT76375.1| putative ATP-dependent RNA helicase [Arthrobacter arilaitensis
           Re117]
          Length = 538

 Score =  202 bits (515), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/378 (32%), Positives = 200/378 (52%), Gaps = 22/378 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ + + I   L E G     PIQ    P  L G D I Q+K+GTGK++ F + AL +++
Sbjct: 30  DLKVREDIVASLSEAGIEYPFPIQALTLPVALGGNDIIGQAKTGTGKTLGFGIPALQRVV 89

Query: 85  K----------LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQ 130
           +           P   PQ +I+APTRE+A+Q+   +     H  N+ +    GG     Q
Sbjct: 90  REGDKGYEDLEFP-GAPQALIVAPTRELAIQVGADLAQASKH-SNISITTIYGGRPYEEQ 147

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
           +   K    ++VG+PGR+  + + + LN+  V+  ++DEAD++++ GF+ D+  I + LP
Sbjct: 148 INALKAGTDVIVGTPGRLIDLNRQRVLNLKQVKTVVLDEADEMLDLGFLPDVERILAALP 207

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRY 249
           P++Q ++ SAT     +   ++YM  P  IR +D      L  + +  LI    N     
Sbjct: 208 PVRQAMLFSATMPGAVITMARRYMTRPTHIRAQDPGDDDSLTKRNIRQLIYRAHN----- 262

Query: 250 VDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
           +D+++ + +LL      + +IF+  +     + + L +  F A  L G   Q AR  +L 
Sbjct: 263 MDKDEMVARLLQAEGRGKTIIFTQTKRSAARLSDELIDRGFNAGSLHGDLGQGAREQALK 322

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           +F+ GKV ILV TD+AARGID  +V  V+NL+ P D  TYLHR+GR GR G  G  +T V
Sbjct: 323 AFRSGKVEILVATDVAARGIDVDDVTHVVNLQCPDDENTYLHRVGRTGRAGNTGTAVTFV 382

Query: 370 SAESLVKFHSLMGEINLD 387
             +S+ ++  +   + L+
Sbjct: 383 DWDSVPRWSLINKALGLN 400


>gi|317159567|gb|ADV04058.1| DEAD box RNA helicase RH2b [Hevea brasiliensis]
          Length = 395

 Score =  202 bits (515), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 116/354 (32%), Positives = 194/354 (54%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+   GF K   IQ  A   ++ G D I Q++SGTG++ + +   + +L+   
Sbjct: 29  IKNDLLRGIYAYGFEKPPAIQQRAVMPIIKGRDVIAQAQSGTGRTSM-IALTVCQLVDTS 87

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G ++ N+     IGG  V    R     V +V G
Sbjct: 88  SREVQALILSPTRELAAQTEKVILAIGDYI-NIQAHACIGGKSVGEDIRKLEFGVHVVSG 146

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   ++RL ++DE+D++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 147 TPGRVCDMIKRRTLRTRAIRLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 206

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 207 NEILEMTSKFMTDPVKILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 256

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + + NF    + G   QK R A +  F+ G  R+L+
Sbjct: 257 DTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERDAIMSEFRSGTTRVLI 316

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 317 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 370


>gi|346327155|gb|EGX96751.1| eIF4A-like protein [Cordyceps militaris CM01]
          Length = 397

 Score =  202 bits (515), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 134/386 (34%), Positives = 213/386 (55%), Gaps = 29/386 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQM A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 27  DDMNLKSELLRGIYAYGFERPSAIQMRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQK- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 86  IDPAVKQCQALILAPTRELAQQIQKVVIAIGDFM-NIECHACIGGTSVRDDMKALQDGPQ 144

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  DS+++F++DEAD++++ GF + I  I+  LP   Q++++S
Sbjct: 145 VVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTDQIYDIFQLLPQATQVVLLS 204

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---- 255
           AT   D L    ++M DP+ I  +     L G+KQ              Y+  EK+    
Sbjct: 205 ATMPQDVLEVTTRFMRDPVRILVKKDELTLEGIKQF-------------YIAVEKEEWKL 251

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ 
Sbjct: 252 DTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRS 311

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE 
Sbjct: 312 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTAED 371

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNL 399
           +     +M EI   ++  +  +P N+
Sbjct: 372 V----RMMREIEQFYSTQIEEMPMNV 393


>gi|237755972|ref|ZP_04584559.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691876|gb|EEP60897.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 405

 Score =  202 bits (515), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 121/355 (34%), Positives = 209/355 (58%), Gaps = 20/355 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ + K   + L E G+ K + IQ  A P V+ G D + Q+++GTGK+  F V  + K +
Sbjct: 10  DLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIVEK-V 68

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQ 139
               ++ Q +IL PTRE+A+Q+   ++ +G + K ++     GG  +        K    
Sbjct: 69  NPKQKKVQALILVPTRELAIQVAKEIKELGKN-KKVYTLAVYGGKSISHQINFLKKGSDV 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +++   LN+D+V++F++DEAD+++  GF++DI  I S LP  +Q+L+ S
Sbjct: 128 VVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLEMGFIDDIEEIMSYLPEDRQILLFS 187

Query: 200 ATYSHDNLATLQKYM---VDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           AT   + L   ++++    + + ++P++ T  +  +KQ++  +    NP     D+ KKL
Sbjct: 188 ATMPKEILELAEEFLNENYETIKVKPDEVT--VEKIKQIIYRV----NPR----DKFKKL 237

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++LSQ    + +IF+  ++  + + E L    F A  + G   QK R   L +F+ GK+
Sbjct: 238 TEVLSQNEAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKL 297

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           +ILV TD+AARG+D   VDLVIN  +P DA +Y+HR+GR GR G  G  I+I+++
Sbjct: 298 KILVATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTS 352


>gi|145219994|ref|YP_001130703.1| DEAD/DEAH box helicase [Chlorobium phaeovibrioides DSM 265]
 gi|145206158|gb|ABP37201.1| ATP-dependent RNA helicase CsdA [Chlorobium phaeovibrioides DSM
           265]
          Length = 598

 Score =  202 bits (515), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 114/358 (31%), Positives = 190/358 (53%), Gaps = 13/358 (3%)

Query: 17  NIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFV 76
           NI +    D+ + +P+ + L + G+   +PIQ    P ++ G D + Q+++GTGK+  F 
Sbjct: 6   NISISSFTDLNLAEPVLRALADVGYETPTPIQARTIPLLIEGRDVLGQAQTGTGKTAAFA 65

Query: 77  VAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVE 132
           +  L+  I     +PQ ++LAPTRE+A+Q+ +       H+K  HV    GG    +Q+ 
Sbjct: 66  LPILSN-IDFSATEPQVLVLAPTRELAIQVAEAFHKYAEHLKGFHVLPIYGGQEYGSQLR 124

Query: 133 RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
             KR V +VVG+PGR+   ++   LN+ S++  ++DEAD+++  GF++D+ WI  Q P  
Sbjct: 125 MLKRGVHVVVGTPGRVMDHMRKGSLNLHSLKCLVLDEADEMLRMGFIDDVEWILEQTPSD 184

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
           +Q+ + SAT         QKY+ DP  +  +  T  +  ++Q   ++       +     
Sbjct: 185 RQVALFSATMPAPIRRIAQKYLNDPAEVTIQAKTTTVDTIRQRYWIVGGSHKIDI----- 239

Query: 253 EKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
              L ++L   PF+  +IF   +     I E L    + A  L+G   Q+ R  ++D  K
Sbjct: 240 ---LTRILEVEPFDGMIIFVRTKTMTLEIAEKLQARGYSAAALNGDMVQQQRERTIDQLK 296

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            G + I++ TD+AARG+D   +  VIN +IP D  +Y+HR+GR GR G  G  I  VS
Sbjct: 297 SGALNIVIATDVAARGLDVERISHVINYDIPSDTESYVHRIGRTGRAGRSGEAILFVS 354


>gi|71650885|ref|XP_814131.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma cruzi strain CL
           Brener]
 gi|70879078|gb|EAN92280.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
          Length = 406

 Score =  202 bits (515), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 204/386 (52%), Gaps = 27/386 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV S  +V FE +  + + ++ G+ E GF + SP+Q  A P  L G D + ++K+GT
Sbjct: 21  KTEDVESRRNVTFE-EYGLRRELQMGIFEKGFERPSPVQEEAIPVALQGKDVLARAKNGT 79

Query: 70  GKSIVFVVAALNKLIKLPVQQP--QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG 127
           GK+  FV+  L K+     ++P  Q +++ PTRE+A+Q   V + +G H+  L V    G
Sbjct: 80  GKTASFVIPVLEKV---DTREPHIQALLMVPTRELALQTAQVTKELGKHISGLEVMVTTG 136

Query: 128 GTQVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
           GT +     R + PV ++V +PGR+  +   +   +D  R+ ++DEADKL++  F E I 
Sbjct: 137 GTTLRDDILRLQNPVHVLVATPGRVVDLASKRTAKLDRCRIIVLDEADKLLSQEFTELIE 196

Query: 184 WIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPEC 242
            +Y+ LP  +Q L+ SAT+         +Y+ +P  I   E+ T  L GV Q        
Sbjct: 197 DLYTYLPADRQSLLFSATFPVTVKDFADRYLRNPYEINLMEELT--LRGVTQYYV----- 249

Query: 243 KNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQ 299
                 +V+E +K   L  L ++   NQ +IF N   R E++ + +    +   Y+    
Sbjct: 250 ------FVEERQKIHCLNTLFNRLQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARM 303

Query: 300 DQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRY 359
            Q+ R      F+ G  R LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+
Sbjct: 304 QQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRF 363

Query: 360 GTRGLVITIVSAESLVKFHSLMGEIN 385
           G  GL I  V+ +     + +  E++
Sbjct: 364 GHLGLAINFVTYDDRYNVYRIEKELD 389


>gi|342890194|gb|EGU89058.1| hypothetical protein FOXB_00470 [Fusarium oxysporum Fo5176]
          Length = 396

 Score =  202 bits (515), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 213/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DDMNLKSELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  ++ +     IGGT V    + +Q    
Sbjct: 85  IDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMQ-IECHACIGGTSVREDMKALQDGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ MI+ ++L  DS+++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVQDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|262369669|ref|ZP_06062997.1| superfamily II DNA and RNA helicase [Acinetobacter johnsonii SH046]
 gi|381196601|ref|ZP_09903943.1| ATP-dependent RNA helicase RhlB [Acinetobacter lwoffii WJ10621]
 gi|262315737|gb|EEY96776.1| superfamily II DNA and RNA helicase [Acinetobacter johnsonii SH046]
          Length = 383

 Score =  202 bits (515), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 114/354 (32%), Positives = 197/354 (55%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF   +PIQ     + L G+DAI ++++GTGK+  F+V+ +N L+  P+Q+ 
Sbjct: 14  LKRAIDALGFKDMTPIQQKVLKFTLAGHDAIGRAQTGTGKTAAFLVSVINDLLNNPIQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK-----RPVQI 140
                P+ +ILAPTRE+A+QI    + +     +LHV   +GG   ++ K     +PV I
Sbjct: 74  RYRGEPRALILAPTRELALQIESDAKEL-TKFSDLHVVTLLGGVDFDKQKAQLDKKPVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  +S     +Q L+ 
Sbjct: 133 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   Q+++ +P+ +  E   +    V+Q V ++ +         D+ K L  
Sbjct: 193 SATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVAKS--------DKYKLLQD 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L   P  + +IF+N + +   + +NL    +    LSG   Q  RL  LD FK G+  I
Sbjct: 245 ILRDEPIEKVMIFANRRDQVRKLYDNLKRDGYKVVMLSGEIAQDKRLKMLDQFKNGQHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR GTRG+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTRGVSISFLSED 358


>gi|255087672|ref|XP_002505759.1| predicted protein [Micromonas sp. RCC299]
 gi|226521029|gb|ACO67017.1| predicted protein [Micromonas sp. RCC299]
          Length = 426

 Score =  202 bits (515), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 128/356 (35%), Positives = 191/356 (53%), Gaps = 18/356 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D I Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLAVLQQLE 108

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK-----RPVQ 139
            +P  +   +IL  TRE+A QI        A++  ++V    GG  +++ K     +P  
Sbjct: 109 PVP-GEVGALILCHTRELAYQIKHEFERFSAYLPAVNVAVIFGGVNIKQQKAELKEKPPS 167

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           I+V +PGR K + K   +++     FI+DE DK++       D+  I+   P  KQ+++ 
Sbjct: 168 IIVATPGRCKALAKDGDISLKQCGHFILDECDKMLEQLDMRADVQEIFKMTPHDKQVMMF 227

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLG--VKQLVALIPECKNPSLRYVDEEKKL 256
           SAT S +    ++K+M DP+ I  +D T+  L   V+  + L    KN         +KL
Sbjct: 228 SATLSKEIRPVIKKFMNDPMEIYVDDETKLTLHGLVQHYIKLTEAEKN---------RKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RLA   SFK G  
Sbjct: 279 NDLLDALMFNQVVIFVKSVQRCTYLDKLLTECNFPSIAIHRGMSQEERLARYKSFKEGNK 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           RILV TDL ARGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT +S++
Sbjct: 339 RILVATDLVARGIDIERVNIVINYDMPDGADTYLHRVGRAGRFGTKGLAITFLSSD 394


>gi|66825125|ref|XP_645917.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
           discoideum AX4]
 gi|1688326|gb|AAB36962.1| IfdA [Dictyostelium discoideum]
 gi|60473986|gb|EAL71923.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
           discoideum AX4]
          Length = 395

 Score =  202 bits (515), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 123/359 (34%), Positives = 199/359 (55%), Gaps = 31/359 (8%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ + K + +G+   GF K S IQ  A   +  G+D I Q++SGTGK+  F V  L++ 
Sbjct: 27  DNMELPKDLLRGIYSYGFEKPSAIQQRAIIPLSKGFDIIAQAQSGTGKTATFTVGILSR- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF--IGGTQV----ERPKRP 137
           I + V + Q +I+APTRE+A QI  VV ++G +   LH+  +  IGGT++    +  +  
Sbjct: 86  IDISVLKCQALIIAPTRELAQQIQKVVLALGEY---LHIKSYACIGGTKITDDIQALQSG 142

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V +VVG+PGR+ +M+    +N D++R+F +DEAD++++ GF + I  I+  LP   Q+ +
Sbjct: 143 VHVVVGTPGRVFEMLSRGIINRDTIRIFCLDEADEMLSRGFKDQIYEIFRFLPKTIQVGL 202

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD---EEK 254
            SAT + + L    K+M +P+ I  +     L G++Q              YV+   E+ 
Sbjct: 203 FSATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQF-------------YVNVGVEQG 249

Query: 255 K---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
           K   L  L       Q VIF N + + + +   +    F      G  DQK R   L +F
Sbjct: 250 KFEVLTDLYETLSITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHG--DQKDRDGILQAF 307

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           + G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  ++
Sbjct: 308 RSGATRVLITTDLLARGIDVQQVSLVINFDLPTNIENYIHRIGRSGRFGRKGVAINFIT 366


>gi|74656036|sp|Q58Z64.1|DHH1_CRYNH RecName: Full=ATP-dependent RNA helicase VAD1; AltName:
           Full=Virulence-associated DEAD box protein 1
 gi|54873506|gb|AAV41010.1| virulence associated DEAD box protein 1 [Cryptococcus neoformans
           var. grubii]
 gi|55982655|gb|AAV69745.1| virulence-associated DEAD Box protein [Cryptococcus neoformans var.
           grubii]
 gi|405122977|gb|AFR97742.1| virulence-associated DEAD Box protein [Cryptococcus neoformans var.
           grubii H99]
          Length = 616

 Score =  202 bits (515), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 202/387 (52%), Gaps = 21/387 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +     FE D  + + +  G+   GF + SPIQ  A P  L G D + ++K+GT
Sbjct: 26  QTEDVTATQGSRFE-DFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGT 84

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  LN+ I   +   Q +IL PTRE+A+Q + V +++GAH+ NL V    GGT
Sbjct: 85  GKTASFIIPTLNR-INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGT 143

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R ++PV I+VG+PGRI  +       ++   +F+MDEADKL++  F+  I   
Sbjct: 144 TLRDDILRLQQPVHILVGTPGRILDLGSKGIAGLNKCGIFVMDEADKLLSEDFMPVIEQT 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            +  P  +Q+++ SAT+         ++MV P  I   D    L GV Q  A        
Sbjct: 204 LALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEINLMDEL-TLKGVTQYYA-------- 254

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              YV+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 255 ---YVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMQQA 311

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV +DL  RGID   V++VIN + P  A +YLHR+GR+GR+G  
Sbjct: 312 HRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYLHRIGRSGRFGHL 371

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHA 389
           GL I++++ E     + +  E+  + A
Sbjct: 372 GLAISLLTLEDRHNLYRIESELGTEIA 398


>gi|227204273|dbj|BAH56988.1| AT3G13920 [Arabidopsis thaliana]
          Length = 398

 Score =  202 bits (515), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 132/382 (34%), Positives = 200/382 (52%), Gaps = 34/382 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           +  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  KLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 79  VIQQAQSGTGKTATFCSGVLQQL-DFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GV 136

Query: 121 HVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R +Q    +VVG+PGR+  M+K + L  D++++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 364 HRIGRSGRFGRKGVAINFVTRD 385


>gi|220913497|ref|YP_002488806.1| DEAD/DEAH box helicase [Arthrobacter chlorophenolicus A6]
 gi|219860375|gb|ACL40717.1| DEAD/DEAH box helicase domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 694

 Score =  202 bits (515), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 195/357 (54%), Gaps = 21/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I+  +   LQ+ G+ K SPIQ A  P +L G D +  +++GTGK+  F V AL++L 
Sbjct: 54  DLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSRLA 113

Query: 85  KL-----PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPK 135
           +L     P ++ Q ++LAPTRE+A+Q+ +   S   H+ +  V    GG+    Q+   +
Sbjct: 114 ELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLPVYGGSAYGPQLAGLR 173

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
           R  Q+VVG+PGR+   I    L++  ++  ++DEAD+++  GF ED+  I+ Q P  +Q+
Sbjct: 174 RGAQVVVGTPGRVIDHISKGSLDLSELQYLVLDEADEMLRMGFAEDVEQIFQQTPEDRQV 233

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ--LVALIPECKNPSLRYVDEE 253
            + SAT         ++Y+ DP  I  +  T     ++Q  L  + P+  +   R ++ E
Sbjct: 234 ALFSATMPGQIRRMSKQYLNDPAEISVKTKTSTGTNIRQRYLQIMGPQKLDAMTRILEVE 293

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
           +          F+  + F   ++  E + + L +  F A  ++G   Q+ R  ++D+ K 
Sbjct: 294 E----------FDGVIAFVRTKMATEDLADKLKSRGFQAAAINGDIPQQQRERTVDALKE 343

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           G++ ILV TD+AARG+D   +  VIN +IPHD  +Y+HR+GR GR G  G  I  ++
Sbjct: 344 GRIDILVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRNGDAILFMT 400


>gi|90022676|ref|YP_528503.1| ATP-dependent RNA helicase DeaD [Saccharophagus degradans 2-40]
 gi|89952276|gb|ABD82291.1| DEAD/DEAH box helicase-like protein [Saccharophagus degradans 2-40]
          Length = 595

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 192/352 (54%), Gaps = 23/352 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I + L + G+   SPIQ  + P +L G D + Q+++GTGK+  F +  LN L  L  + P
Sbjct: 17  ILKALTDVGYETPSPIQAKSIPELLAGRDILGQAQTGTGKTAAFALPILNNL-DLSQKAP 75

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+A+Q+ +  +S   H+   H+    GG     Q+   KR V ++VG+PGR
Sbjct: 76  QVLVLAPTRELAIQVAEAFQSYAHHLPGFHILPIYGGQGYDQQIRALKRGVHVIVGTPGR 135

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   L +D +++ ++DEAD+++  GF++D+ W+ +Q PP +Q+ + SAT   +  
Sbjct: 136 VMDHMRKGTLKLDQLKVLVLDEADEMLRMGFIDDVEWVLTQTPPTRQIALFSATMPKEIA 195

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRY--VDEEKKL---VQLLSQ 262
               KY+ DP LI+ E  T+    ++Q             RY  V    KL    ++L  
Sbjct: 196 KVANKYLNDPALIKIEVKTQTADTIRQ-------------RYWGVSGHHKLDATTRILEA 242

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
             F+  +IF   +     + E LA   + +  L+G   Q  R  +++  K+G++ ILV T
Sbjct: 243 EEFDAMIIFVRTKTTTIELAEKLAARGYSSAALNGDISQNLRERTVEKLKKGQIDILVAT 302

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           D+AARG+D   +  V+N +IP+D+  Y+HR+GR GR G  G  I  V+   +
Sbjct: 303 DVAARGLDVDRISHVLNYDIPYDSEAYVHRIGRTGRAGRSGEAILFVAPREM 354


>gi|365981527|ref|XP_003667597.1| hypothetical protein NDAI_0A01960 [Naumovozyma dairenensis CBS 421]
 gi|343766363|emb|CCD22354.1| hypothetical protein NDAI_0A01960 [Naumovozyma dairenensis CBS 421]
          Length = 534

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 131/397 (32%), Positives = 207/397 (52%), Gaps = 22/397 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  + G D + ++K+GT
Sbjct: 27  QTEDVLNTKGNTFE-DFFLKRELLMGIFEAGFEKPSPIQEESIPIAITGRDILARAKNGT 85

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L + IK  + + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 86  GKTAAFVIPTLER-IKPNLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 143

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V ++VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 144 NLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQI 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP   Q L+ SAT+       + K++ +P  I   D    L G+ Q  A        
Sbjct: 204 LIFLPKKHQSLLFSATFPLTVKEFMVKHLNNPYEINLMDEL-TLKGITQFYA-------- 254

Query: 246 SLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q+
Sbjct: 255 ---FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQ 311

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F++GKVR LV +DL  RGID   V++VIN + P  + TYLHR+GR+GR+G  
Sbjct: 312 ERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTSETYLHRIGRSGRFGHL 371

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           GL I +++       + +  E+  + A   G +  +L
Sbjct: 372 GLAINLINWNDRFNLYKIEQELGTEIAAIPGTIDKSL 408


>gi|189502902|gb|ACE06832.1| unknown [Schistosoma japonicum]
 gi|226469666|emb|CAX76663.1| Helicase at 25E [Schistosoma japonicum]
 gi|226469670|emb|CAX76665.1| Helicase at 25E [Schistosoma japonicum]
 gi|226469672|emb|CAX76666.1| Helicase at 25E [Schistosoma japonicum]
 gi|226469674|emb|CAX76667.1| Helicase at 25E [Schistosoma japonicum]
 gi|226469676|emb|CAX76668.1| Helicase at 25E [Schistosoma japonicum]
 gi|226469678|emb|CAX76669.1| Helicase at 25E [Schistosoma japonicum]
 gi|226473012|emb|CAX71192.1| Helicase at 25E [Schistosoma japonicum]
 gi|226473014|emb|CAX71193.1| Helicase at 25E [Schistosoma japonicum]
 gi|226473016|emb|CAX71194.1| Helicase at 25E [Schistosoma japonicum]
 gi|226473018|emb|CAX71195.1| Helicase at 25E [Schistosoma japonicum]
 gi|226473020|emb|CAX71196.1| Helicase at 25E [Schistosoma japonicum]
          Length = 426

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 125/380 (32%), Positives = 200/380 (52%), Gaps = 18/380 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D +++  + + + + GF   S +Q    P  +   D + Q+KSG GK+ VFV+A L +L 
Sbjct: 47  DFILKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLD 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQ 139
                    ++L  TRE+A QI+        ++  + V  F GG  + +      K PV 
Sbjct: 107 PEGEANTSVLVLCHTRELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +++ K L +  V+ FI+DE DK+++T     D+  I+   P  KQ+++ 
Sbjct: 167 IVVGTPGRILDLVRSKTLKLQHVKHFIIDECDKMLDTLDMRRDVQEIFRMTPHQKQVMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPE-DATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     + +M DPL I  E D+   L G++Q    + E         ++ +KL 
Sbjct: 227 SATMSKEIRPVCRNFMQDPLEIFIENDSKLTLHGLRQHYVKVKEN--------EKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +LL +  FNQ +IF     R   + + L + NF A  +     Q+ RL    +FK  + R
Sbjct: 279 ELLDELQFNQVIIFVKSVQRCMALAQLLVDQNFPAIAMHRNMAQEERLERYQAFKNFQKR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +LV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT +S E   K 
Sbjct: 339 LLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDEQDAK- 397

Query: 378 HSLMGEINLDHAFNVGLVPD 397
             ++ E+      N+  +PD
Sbjct: 398 --VLNEVQNRFEVNISELPD 415


>gi|387018188|gb|AFJ51212.1| ATP-dependent RNA helicase DDX39-like [Crotalus adamanteus]
          Length = 427

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 204/382 (53%), Gaps = 19/382 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L ++ 
Sbjct: 48  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIE 107

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            L   Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++     
Sbjct: 108 PLD-GQVSVLVMCHTRELAFQISKEYERFSKYMTNVKVSVFFGGLSIKKDEEVLKKNCPH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGR   +++ K LN+ +V+ F++DE DK++       D+  I+   PP KQ ++ 
Sbjct: 167 IVVGTPGRTLALVRNKTLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPPEKQCMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ +  +D T+  L G++Q            L+  ++ +KL 
Sbjct: 227 SATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYV--------KLKDTEKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + R
Sbjct: 279 DLLDVLEFNQVVIFVKSVQRCMALAQLLIEQNFPAIAIHRGMSQEERLSRYQQFKDFQRR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           ILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E   K 
Sbjct: 339 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAK- 397

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ E+      NV  +P+ +
Sbjct: 398 --ILNEVQDRFEVNVAELPEEI 417


>gi|387594443|gb|EIJ89467.1| hypothetical protein NEQG_00237 [Nematocida parisii ERTm3]
 gi|387596715|gb|EIJ94336.1| hypothetical protein NEPG_01004 [Nematocida parisii ERTm1]
          Length = 483

 Score =  202 bits (514), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 203/352 (57%), Gaps = 14/352 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I +G+   GF K SPIQM A   +L G D   Q++SGTGK+  F +A+L   +   +++ 
Sbjct: 112 ILKGIFSLGFEKPSPIQMTAIVPLLKGRDLRAQAQSGTGKTAAFGIASLQS-VDQKLKEL 170

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGSPGR 147
           Q II+  TRE+A+Q   V++++G+   N+ ++   GG ++    E+ K+  QI+VG+PGR
Sbjct: 171 QVIIMETTRELAIQTCSVLQNLGSST-NICIEAVYGGVRITETLEKVKKRPQILVGTPGR 229

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP-PMKQMLVVSATYSHDN 206
           +  +I++K LN++ V+LFI+DEAD+++  GF+E I  +Y+++P    Q+ + SAT+S + 
Sbjct: 230 LLHLIEMKQLNLNHVKLFILDEADEMLKKGFLESINLLYNKIPNKQIQVGLFSATWSKEE 289

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK--KLVQLLSQTP 264
                + + +P++I  +D  + L G+KQ    + + +  +   VD  K   L  L  +  
Sbjct: 290 QEITAQILNEPVIISLKDEDQTLKGIKQYYVNVGDKRGAT---VDMSKFEVLCDLYDRGS 346

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
            +Q VIF N   R   I +N+    F  E       Q  R   +  F  GK R LV++ L
Sbjct: 347 ISQSVIFCNKVERAINIQKNMIERGFECEIFHSELPQDVRNDVMKRFAEGKCRTLVSSGL 406

Query: 325 AARGIDAANVDLVINLEIPHDAAT--YLHRMGRAGRYGTRGLVITIVSAESL 374
            ARG+D   + +VIN ++PH+     Y+HR+GRAGRYG +G  I +VS++ +
Sbjct: 407 LARGVDVQTLSVVINFDVPHEKEIENYIHRIGRAGRYGRKGTAINLVSSDDM 458


>gi|408382716|ref|ZP_11180258.1| DEAD/DEAH box helicase domain-containing protein [Methanobacterium
           formicicum DSM 3637]
 gi|407814518|gb|EKF85143.1| DEAD/DEAH box helicase domain-containing protein [Methanobacterium
           formicicum DSM 3637]
          Length = 526

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 121/368 (32%), Positives = 202/368 (54%), Gaps = 21/368 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFE D+ +   +++ + + GF + +PIQ  A P +L+G D I Q+++GTGK+  F +  
Sbjct: 4   LLFE-DLKLSPEMKRAIADMGFEEATPIQSLALPPILDGKDVIGQAQTGTGKTAAFGIPV 62

Query: 80  LNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----K 135
           L KL    V+  Q IIL PTRE+A+Q+ + ++ +  + K   +  + GG  +ER     K
Sbjct: 63  LEKL-DPTVKGVQAIILCPTRELAIQVAEEIKKLSKYKKTSVLPVY-GGQPIERQIKALK 120

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
           R VQI++G+PGR+   I  + L MD V++ I+DEAD++++ GF +DI ++   +   +QM
Sbjct: 121 RGVQIIIGTPGRVMDHIHRRTLRMDQVKMIILDEADEMLDMGFRDDIEFVLEHVSHERQM 180

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           L+ SAT S   L   +KY  +P           +L V      +PE +      V E+ K
Sbjct: 181 LLFSATMSRQILGITRKYQNNP----------EMLKVAHQEITVPEIQQIYFE-VKEQMK 229

Query: 256 ---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
              L +L+        ++F N + R + +  NL    + A+ L G   Q  R   ++ F+
Sbjct: 230 LDLLTRLIDMHNLKLALVFCNTKRRVDRLVSNLQTRGYFADGLHGDMSQNQRDRVMNKFR 289

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           +G++ ILV TD+AARGID  +V+ V N ++P++   Y+HR+GR GR G  G   T  S +
Sbjct: 290 KGQIEILVATDVAARGIDVDDVEAVFNYDVPNNEEYYVHRIGRTGRAGRTGQAFTFASGK 349

Query: 373 SLVKFHSL 380
            + +   +
Sbjct: 350 EIYQLRDI 357


>gi|269838391|ref|YP_003320619.1| DEAD/DEAH box helicase [Sphaerobacter thermophilus DSM 20745]
 gi|269787654|gb|ACZ39797.1| DEAD/DEAH box helicase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 526

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 132/412 (32%), Positives = 222/412 (53%), Gaps = 29/412 (7%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ + +P+ + +   GF + +PIQ  A P +L+G D I Q+++GTGK+  F +  + +L 
Sbjct: 6   DLGLSEPVLKAIDAVGFEEPTPIQREAIPLLLSGRDLIAQAQTGTGKTAAFALPIIERL- 64

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR----PVQI 140
           +   ++PQ ++LAPTRE+AVQ+      +G  V++  V    GG  +ER  R    PV++
Sbjct: 65  QPNGRRPQALVLAPTRELAVQVAQTFHQLG-RVRDTRVLAVYGGQPIERQLRALRHPVEV 123

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   I+ + L++ +V   ++DEAD++++ GF+ED+ WI   +P  +Q  + SA
Sbjct: 124 VVGTPGRVMDHIRRETLDLSNVSTVVIDEADEMLDMGFIEDVEWILDHVPAERQTALFSA 183

Query: 201 TYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSL-RYVDEEKKLV 257
           T      A  ++Y+ DP  + + PE  T P +  +  V ++   K  +L R +D E    
Sbjct: 184 TIPDRVAALARRYLRDPARVAVEPERVTVPQIE-QTYVEVVQRAKVEALTRILDME---- 238

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
                TP    +IF   +   + + + L +  + AE L G   Q  R   +  F+ G+  
Sbjct: 239 -----TP-PSAIIFCRTKRGVDELTQQLQSLGYAAEALHGDLSQVQRDRVMARFRSGQAE 292

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L+ TD+AARG+D   +  VIN +IP D  +Y+HR+GR GR G  G  IT+V+       
Sbjct: 293 LLIATDVAARGLDVEGITHVINYDIPGDPESYVHRIGRTGRAGRAGAAITLVTPRE---- 348

Query: 378 HSLMGEINLDHAFNVGLVPDNL-TGDQINWTQRVQTLLAKPLDQAQEREDVE 428
             L+ EI  + A  V +    + T +++   QR   LL + L +  E  D+E
Sbjct: 349 RRLLREI--ERATGVRMTRRGVPTPEEVAARQR--ELLGESLAEVIEANDLE 396


>gi|443689578|gb|ELT91951.1| hypothetical protein CAPTEDRAFT_165082, partial [Capitella teleta]
          Length = 433

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 118/354 (33%), Positives = 197/354 (55%), Gaps = 18/354 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L ++ 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVLATLQQI- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV+ Q   ++L  TRE+A QI+        ++  + +  F GG  +++ +  ++    
Sbjct: 108 -EPVENQVSVLVLCHTRELAFQISKEYERFSKYMSGIKIAVFFGGMNIKKDETVLKNNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            I+VG+PGRI  +I+ K+LN+ +++ F++DE DK++       D+  I+   P  KQ+++
Sbjct: 167 NIIVGTPGRILALIRNKHLNLKNIKHFVLDECDKMLEALDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ +  +D ++  L G++Q            L+  ++ ++L
Sbjct: 227 FSATLSEEIRPVCKKFMQDPMEVYVDDDSKLTLHGLQQHYI--------KLKDNEKNRRL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            +LL    FNQ +IF     R   + + L   NF A  +  A  Q+ RLA    FK  + 
Sbjct: 279 FELLDALEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRALTQEERLAKYQQFKDFQK 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS
Sbjct: 339 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVS 392


>gi|187777742|ref|ZP_02994215.1| hypothetical protein CLOSPO_01334 [Clostridium sporogenes ATCC
           15579]
 gi|187774670|gb|EDU38472.1| DEAD/DEAH box helicase [Clostridium sporogenes ATCC 15579]
          Length = 425

 Score =  202 bits (514), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 201/364 (55%), Gaps = 19/364 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--LPVQQPQTI---ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           L  L K     + P+TI   +LAPTRE+A+QI +     G ++ NL      GG     Q
Sbjct: 60  LQNLSKDKKVNKNPRTIRALVLAPTRELAIQIGESFECYGKYI-NLKSAVIFGGVSQNPQ 118

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S+LP
Sbjct: 119 TKALREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
            ++Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  SL   
Sbjct: 179 KVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSL--- 235

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +L++
Sbjct: 236 -----LKHLLKDESIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNN 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+   
Sbjct: 291 FKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCD 350

Query: 371 AESL 374
            E +
Sbjct: 351 IEEI 354


>gi|402587104|gb|EJW81040.1| eukaryotic initiation factor 4A-III, partial [Wuchereria bancrofti]
          Length = 325

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 113/318 (35%), Positives = 181/318 (56%), Gaps = 21/318 (6%)

Query: 65  SKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDY 124
           ++SGTGK+  F +A L  L  + +++ Q +IL+PTRE+AVQI  VV ++G ++ N+    
Sbjct: 1   AQSGTGKTATFSIAVLQSL-DISLRETQALILSPTRELAVQIQKVVLALGDYL-NVQCHA 58

Query: 125 FIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVE 180
            IGGT V    R +     +V G+PGR+  MI+ + L   S+++ ++DEAD+++N GF E
Sbjct: 59  CIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKE 118

Query: 181 DITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIP 240
            +  IY  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ      
Sbjct: 119 QLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVA-- 176

Query: 241 ECKNPSLRYVDEEK----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
                    VD E+     L  L       Q VIF N + + + + E L  ANF    + 
Sbjct: 177 ---------VDREEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLAEKLKEANFTVSSMH 227

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  +QK R A +  F+ G  R+L++TD+ ARG+D   V LV+N ++P++   Y+HR+GR+
Sbjct: 228 GEMEQKERDAIMKEFRGGASRLLISTDVFARGLDIPQVSLVVNYDLPNNRELYIHRIGRS 287

Query: 357 GRYGTRGLVITIVSAESL 374
           GR+G +G+ I  V ++ +
Sbjct: 288 GRFGRKGVAINFVKSDDI 305


>gi|355571182|ref|ZP_09042434.1| DEAD/DEAH box helicase domain protein [Methanolinea tarda NOBI-1]
 gi|354825570|gb|EHF09792.1| DEAD/DEAH box helicase domain protein [Methanolinea tarda NOBI-1]
          Length = 441

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 111/360 (30%), Positives = 200/360 (55%), Gaps = 13/360 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ + +P+ + +++ GF + +PIQ  A P +  G+D + Q+ +GTGK+  F +  L +++
Sbjct: 8   DLDVPEPLLRAIRDLGFEEPTPIQSLAIPVIREGHDMVGQAHTGTGKTAAFGIPLL-EML 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQI 140
           +      Q ++L PTRE+A+Q+++ +R +  ++  + V    GG  +ER     ++ V +
Sbjct: 67  EPDRPAVQALVLCPTRELAIQVSEELRKLARYMGGVSVLPVYGGQPIERQVAVLRKGVHV 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           V+ +PGR+   +  + +++  VR+ ++DEAD++++ GF EDI  I+++LP  +Q ++ SA
Sbjct: 127 VIATPGRLLDHLSRRTVDLSQVRVTVLDEADEMLDMGFAEDIAKIFTRLPEKRQNVLFSA 186

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T S + LA  QK++ DP ++R            QL   + E +   +R  ++ + L +LL
Sbjct: 187 TMSREILALAQKFLKDPRMVRVVHG--------QLAVPVIEQRYFEVRESEKVEVLSRLL 238

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                +  ++F N + R + +   L    + AE L G  DQK R   +  F+     ILV
Sbjct: 239 DYYNPDLALVFCNTKRRVDEVASQLQARGYLAESLHGDMDQKERERVMSRFRSRSTDILV 298

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            TD+AARGID   + +V N ++P D   Y+HR+GR GR G  G   T VS + + K   +
Sbjct: 299 ATDVAARGIDVEEIGIVFNFDVPQDPEYYIHRIGRTGRAGKSGKAFTFVSGKEMWKLRDI 358


>gi|86157651|ref|YP_464436.1| DEAD/DEAH box helicase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774162|gb|ABC80999.1| DEAD/DEAH box helicase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 628

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 128/390 (32%), Positives = 210/390 (53%), Gaps = 16/390 (4%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + +P+R+ + E+G+ K +P+Q A F  + +G D IV+SK+GTGK+  F +  L + 
Sbjct: 23  DDMGLSEPVRRAVAEHGYTKPTPVQSATFRPIRDGKDVIVRSKTGTGKTAAFTIPILER- 81

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I    ++P  +++ PTRE+A+Q+ + V ++  H ++L V    GG     Q+++ K   +
Sbjct: 82  IPDGRRKPSALVMCPTRELAIQVAEEVTALAKH-RDLGVVTIYGGASMGDQLDKLKAGAE 140

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGRI   I+ K L ++ V +  +DEAD+++N GF E++T I   LP   Q L+ S
Sbjct: 141 IVVGTPGRIYDHIRRKTLRLEEVMVCCLDEADEMLNMGFFEEVTRILDHLPADVQQLLFS 200

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT   D    +  Y+ DP  I        L G +  V  I     P++    + + L+ +
Sbjct: 201 ATVPADIEQIIHDYLTDPETIL-------LSGDEYKVENINNVMYPTVDAYPKPRNLLYM 253

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           +        +IF N +    ++   L    + AE L+G   QK R   +   KRG+VR +
Sbjct: 254 IGMEEPEAAIIFCNTRSDTSLVTAVLNRNGYDAELLNGDLPQKERERVMAKVKRGEVRFM 313

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARGID +++  VIN  +P D A +LHR+GR GR G +G  +++VS   L    +
Sbjct: 314 VATDIAARGIDISDLSHVINYSLPEDPAVFLHRVGRTGRIGKKGTSLSLVSGGDLHTLTA 373

Query: 380 LMGEINLDHAFNVGLVPDNLTGDQINWTQR 409
           L  +  +   F    +P      +I WT R
Sbjct: 374 LQKKYEI--VFEKKALPTPEEARKI-WTDR 400


>gi|399218055|emb|CCF74942.1| unnamed protein product [Babesia microti strain RI]
          Length = 395

 Score =  202 bits (514), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 197/346 (56%), Gaps = 13/346 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ I +G+   GF + S +Q  A   +L+G D I+QS+SGTGK+ VF + AL       
Sbjct: 29  LKEEILRGVFAYGFDRPSAVQQRAIKPILSGRDIIIQSQSGTGKTCVFCIGALEAA-DPT 87

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRPVQIVVG 143
           +++ Q ++L+PTRE+A Q   V  ++G ++ N+ +   IGG +    ++  +  VQI+ G
Sbjct: 88  LRETQVLLLSPTRELAEQSQKVCLALGDYL-NVQIHCCIGGKKLSDDIKACESGVQIISG 146

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI  ++LN   ++  I+DEAD+++N GF E +  IY  LPP  Q++VVSAT  
Sbjct: 147 TPGRVSHMINQRHLNTRHIKQLILDEADEMLNRGFKEQVYSIYRYLPPSTQVVVVSATLP 206

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
           H+ L    K+M +PL +  +     L G+KQ    I   +    +Y      L  L    
Sbjct: 207 HEILEMTSKFMNNPLRVLVKRDELTLEGIKQFFVSI---EKEQWKY----DTLCDLYESL 259

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q V+F N + + + + + + + NF    + G   QK R   +  F++G+ R+L++TD
Sbjct: 260 IITQAVVFCNTKAKVDWLAKRMEDNNFTVSKMHGDMTQKERDEIMIQFRKGETRVLISTD 319

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           L  RG+D   V LV+N ++P+   +Y+HR+GR+GR+G +G+ I  V
Sbjct: 320 LWGRGLDVQQVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFV 365


>gi|389637846|ref|XP_003716556.1| ATP-dependent RNA helicase DHH1 [Magnaporthe oryzae 70-15]
 gi|374095382|sp|A4R715.2|DHH1_MAGO7 RecName: Full=ATP-dependent RNA helicase DHH1
 gi|351642375|gb|EHA50237.1| ATP-dependent RNA helicase DHH1 [Magnaporthe oryzae 70-15]
 gi|440465764|gb|ELQ35065.1| ATP-dependent RNA helicase DHH1 [Magnaporthe oryzae Y34]
 gi|440489906|gb|ELQ69516.1| ATP-dependent RNA helicase DHH1 [Magnaporthe oryzae P131]
          Length = 535

 Score =  202 bits (514), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/378 (35%), Positives = 202/378 (53%), Gaps = 22/378 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FEN  L ++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 37  QTEDVTNTKGLEFENFGL-KRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FVV AL + I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 96  GKTAAFVVPAL-ETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 153

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 154 TLRDDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K M +P  I   D    L G+ Q  A        
Sbjct: 214 LQFHPKDRQVMLFSATFPISVKEFSDKNMTNPYEINLMDELT-LRGITQYYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 265 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQQ 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 322 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 381

Query: 363 GLVITIVSAESLVKFHSL 380
           GL I ++S E     +++
Sbjct: 382 GLAINLISWEDRFNLYNI 399


>gi|407848958|gb|EKG03862.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi]
          Length = 406

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 204/386 (52%), Gaps = 27/386 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV S  +V FE +  + + ++ G+ E GF + SP+Q  A P  L G D + ++K+GT
Sbjct: 21  KTEDVESRRNVTFE-EYGLRRELQMGIFEKGFERPSPVQEEAIPVALQGKDVLARAKNGT 79

Query: 70  GKSIVFVVAALNKLIKLPVQQP--QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG 127
           GK+  FV+  L K+     ++P  Q +++ PTRE+A+Q   V + +G H+  L V    G
Sbjct: 80  GKTASFVIPVLEKV---DTREPHIQALLMVPTRELALQTAQVTKELGKHISGLEVMVTTG 136

Query: 128 GTQVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
           GT +     R + PV ++V +PGR+  +   +   +D  R+ ++DEADKL++  F E I 
Sbjct: 137 GTTLRDDILRLQNPVHVLVATPGRVVDLASKRTAKLDRCRIIVLDEADKLLSQEFTELIE 196

Query: 184 WIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPEC 242
            +Y+ LP  +Q L+ SAT+         +Y+ +P  I   E+ T  L GV Q        
Sbjct: 197 DLYTYLPADRQSLLFSATFPVTVKDFADRYLRNPYEINLMEELT--LRGVTQYYV----- 249

Query: 243 KNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQ 299
                 +V+E +K   L  L ++   NQ +IF N   R E++ + +    +   Y+    
Sbjct: 250 ------FVEERQKIHCLNTLFNRLQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARM 303

Query: 300 DQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRY 359
            Q+ R      F+ G  R LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+
Sbjct: 304 QQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRF 363

Query: 360 GTRGLVITIVSAESLVKFHSLMGEIN 385
           G  GL I  V+ +     + +  E++
Sbjct: 364 GHLGLAINFVTYDDRYNVYRIEKELD 389


>gi|283854611|gb|ADB44901.1| DEAD(Asp-Glu-Ala-Asp) box polypeptide 39 [Macrobrachium nipponense]
          Length = 432

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 126/360 (35%), Positives = 196/360 (54%), Gaps = 18/360 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  I + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L ++ 
Sbjct: 54  DFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQID 113

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI         ++ N+ V  F GG  V + +  ++    
Sbjct: 114 --PVDGQVSVLVMCHTRELAYQIAKEYERFTKYMPNVKVGVFFGGMNVSKDEETLKSNCP 171

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADK-LINTGFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGR+  +I+ K LN+ +++ F++DE DK L+      D+  I+   P  KQ+++
Sbjct: 172 HIVVGTPGRLLALIRGKKLNLKNLKHFVLDECDKMLVQLDMRRDVQEIFRNTPHEKQVMM 231

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ +  +D  +  L G++Q    I E         ++ +KL
Sbjct: 232 FSATLSKEIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVKIKEN--------EKNRKL 283

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            +LL    FNQ VIF     R   + + L   NF A  +  A  Q+ RL+    FK  + 
Sbjct: 284 FELLDALEFNQVVIFVKSVQRCMALAQLLVEQNFPAVAIHRAMGQEERLSRYQQFKDFQK 343

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 344 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSEEADAK 403


>gi|407409542|gb|EKF32325.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma cruzi
           marinkellei]
          Length = 406

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 126/386 (32%), Positives = 204/386 (52%), Gaps = 27/386 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV S  +V FE +  + + ++ G+ E GF + SP+Q  A P  L G D + ++K+GT
Sbjct: 21  KTEDVESRRNVTFE-EYGLRRELQMGIFEKGFERPSPVQEEAIPVALQGKDVLARAKNGT 79

Query: 70  GKSIVFVVAALNKLIKLPVQQP--QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG 127
           GK+  FV+  L K+     ++P  Q +++ PTRE+A+Q   V + +G H+  L V    G
Sbjct: 80  GKTASFVIPVLEKV---DTREPHIQALLMVPTRELALQTAQVTKELGKHISGLEVMVTTG 136

Query: 128 GTQVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
           GT +     R + PV ++V +PGR+  +   +   +D  R+ ++DEADKL++  F E I 
Sbjct: 137 GTTLRDDILRLQNPVHVLVATPGRVVDLASKRTAKLDRCRIIVLDEADKLLSQEFTELIE 196

Query: 184 WIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPEC 242
            +Y+ LP  +Q L+ SAT+         +Y+ +P  I   E+ T  L GV Q        
Sbjct: 197 DLYTYLPADRQSLLFSATFPVTVKDFADRYLRNPYEINLMEELT--LRGVTQYYV----- 249

Query: 243 KNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQ 299
                 +V+E +K   L  L ++   NQ +IF N   R E++ + +    +   Y+    
Sbjct: 250 ------FVEERQKIHCLNTLFNRLQINQSIIFCNSVNRVELLAKKITQLGYSCYYIHARM 303

Query: 300 DQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRY 359
            Q+ R      F+ G  R LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+
Sbjct: 304 QQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRIGRSGRF 363

Query: 360 GTRGLVITIVSAESLVKFHSLMGEIN 385
           G  GL I  V+ +     + +  E++
Sbjct: 364 GHLGLAINFVTYDDRYNVYRIEKELD 389


>gi|19698881|gb|AAL91176.1| eukaryotic translation initiation factor [Arabidopsis thaliana]
          Length = 412

 Score =  202 bits (514), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 131/382 (34%), Positives = 200/382 (52%), Gaps = 34/382 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           +  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  KLNEVLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 79  VIQQAQSGTGKTATFCSGVLQQL-DFSLIQCQALVLAPTRELAQQIEKVMRALGDYL-GV 136

Query: 121 HVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R +Q    +VVG+PGR+  M+K + L  D++++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     + G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTVEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 364 HRIGRSGRFGRKGVAINFVTRD 385


>gi|378756671|gb|EHY66695.1| hypothetical protein NERG_00335 [Nematocida sp. 1 ERTm2]
          Length = 481

 Score =  202 bits (513), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 201/351 (57%), Gaps = 12/351 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I +G+   GF K SPIQM A   +L G D   Q++SGTGK+  F +A+L   +   +++ 
Sbjct: 110 ILKGIFSLGFDKPSPIQMTAIIPLLKGRDLRAQAQSGTGKTAAFGIASLQS-VDQRLKEL 168

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP-----KRPVQIVVGSPG 146
           Q II+  TRE+A+Q   V++ +G+   N+ V+   GG ++        KRP QI+VG+PG
Sbjct: 169 QVIIMETTRELAIQTCSVLQGIGSST-NICVEAIYGGVRISESLDKVKKRP-QILVGTPG 226

Query: 147 RIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMK-QMLVVSATYSHD 205
           R+  +I++K LN++ V+LFI+DEAD+++  GF+E I  +Y+++P  + Q+ + SAT+S +
Sbjct: 227 RLLHLIEMKQLNLNHVKLFILDEADEMLKKGFLESINLLYNKIPNKQIQVGLFSATWSKE 286

Query: 206 NLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPF 265
                 + + DP++I  +D  + L G+KQ    + + +  S+     E  L  L  +   
Sbjct: 287 EQEITAQILNDPVIISLKDEDQTLKGIKQYYVNVGDKRGASVDMTKFE-VLCDLYDRGSI 345

Query: 266 NQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLA 325
           +Q VIF N   R   I +N+    F  E       Q+ R   +  F  GK R LV++ L 
Sbjct: 346 SQSVIFCNKVERAINIQKNMIERGFECEIFHSELPQEVRNDVMKRFAEGKCRTLVSSGLL 405

Query: 326 ARGIDAANVDLVINLEIPHDA--ATYLHRMGRAGRYGTRGLVITIVSAESL 374
           ARG+D   + +VIN ++P +     Y+HR+GRAGRYG +G  I +VSA+ +
Sbjct: 406 ARGVDVQTLSVVINFDVPQEKEIENYIHRIGRAGRYGRKGTAINLVSADDM 456


>gi|256070997|ref|XP_002571828.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
 gi|353228609|emb|CCD74780.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
          Length = 426

 Score =  202 bits (513), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 125/380 (32%), Positives = 200/380 (52%), Gaps = 18/380 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D +++  + + + + GF   S +Q    P  +   D + Q+KSG GK+ VFV+A L +L 
Sbjct: 47  DFILKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLD 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQ 139
                    ++L  TRE+A QI+        ++  + V  F GG  + +      K PV 
Sbjct: 107 PEGEANTTVLVLCHTRELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +++ K L +  V+ FI+DE DK+++T     D+  I+   P  KQ+++ 
Sbjct: 167 IVVGTPGRILDLVRSKTLKLQHVKHFIIDECDKMLDTLDMRRDVQEIFRMTPHQKQVMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPE-DATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     + +M DPL I  E D+   L G++Q    + E         ++ +KL 
Sbjct: 227 SATMSKEIRPVCRNFMQDPLEIFIENDSKLTLHGLRQHYVKVKEN--------EKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +LL +  FNQ +IF     R   + + L + NF A  +     Q+ RL    +FK  + R
Sbjct: 279 ELLDELQFNQVIIFVKSVQRCMALAQLLVDQNFPAIAMHRNMAQEERLERYQAFKNFQKR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +LV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT +S E   K 
Sbjct: 339 LLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDEVDAK- 397

Query: 378 HSLMGEINLDHAFNVGLVPD 397
             ++ E+      N+  +PD
Sbjct: 398 --VLNEVQNRFEVNISELPD 415


>gi|226952982|ref|ZP_03823446.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter sp. ATCC
           27244]
 gi|294650564|ref|ZP_06727921.1| ATP-dependent RNA helicase RhlB [Acinetobacter haemolyticus ATCC
           19194]
 gi|226836303|gb|EEH68686.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter sp. ATCC
           27244]
 gi|292823561|gb|EFF82407.1| ATP-dependent RNA helicase RhlB [Acinetobacter haemolyticus ATCC
           19194]
          Length = 383

 Score =  202 bits (513), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 112/354 (31%), Positives = 200/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  P+Q+ 
Sbjct: 14  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPIQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    +S+     NLH+   +GG   ++ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAKSL-TKFSNLHLVTLLGGVDFDKQKKMLDRNFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 133 IVATPGRLIDFVEQKEVWLDRIEFLVIDEADRLLDMGFIPSVKRIVRYSPSKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +  + V+Q V ++ +         D+ K L  
Sbjct: 193 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNVDVEQRVYVVAK--------EDKYKLLQD 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L   P ++ +IF+N + +   + ++L    +    LSG   Q  RL  LD FK+GK  I
Sbjct: 245 ILRDEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|427391479|ref|ZP_18885885.1| hypothetical protein HMPREF9233_01388 [Actinobaculum massiliae
           ACS-171-V-Col2]
 gi|425732122|gb|EKU94934.1| hypothetical protein HMPREF9233_01388 [Actinobaculum massiliae
           ACS-171-V-Col2]
          Length = 567

 Score =  202 bits (513), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 247/500 (49%), Gaps = 49/500 (9%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  + + + + L + G +   PIQ    P  L+ +D I Q+K+GTGK++ F +  L   I
Sbjct: 34  DFGVSEEVTRALADEGIIHPFPIQALTLPVALDRHDIIGQAKTGTGKTLGFGIPMLENTI 93

Query: 85  --------KLPVQQ---PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT---Q 130
                   K+P +    PQ + + PTRE+A Q+ + +R   AH     VD + G     Q
Sbjct: 94  GPGEEGWEKIPEKNQGLPQGLAILPTRELAKQVANELRMAAAHRSVRIVDIYGGRAYEPQ 153

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            E  +R  +IVVG+PGRI  +++   L +D V+  ++DEAD++++ GF+ED+  I S++P
Sbjct: 154 QEALRRGAEIVVGTPGRIIDLMRHGSLRLDHVKTLVLDEADEMLDLGFLEDVETILSRVP 213

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIR---PEDATRPLLGVKQLVALIPECKNPSL 247
             +  ++ SAT     ++  ++YM  P  IR   P D T  +  ++Q+V           
Sbjct: 214 ERRHTMLFSATMPGPVISMARRYMSKPTHIRASAPGDDTHTVKNIRQIVY--------RA 265

Query: 248 RYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLAS 307
             +++++ + ++L      + +IF+  +     + E+L    F    L G   Q AR  +
Sbjct: 266 HALNKDEVIARILQARGRGRTLIFTRTKRSAARLAEDLERRGFATGALHGDLGQGAREQA 325

Query: 308 LDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVIT 367
           L +F+ GKV +LV TD+AARGID  +V  VIN + P D   Y+HR+GR GR G +G  +T
Sbjct: 326 LHAFRNGKVDVLVATDVAARGIDVDDVTHVINYQCPEDEKIYVHRIGRTGRAGNKGTAVT 385

Query: 368 IVSAESLVKFHSLMGEINL------------DHAFNVGLVPDNLTGDQINWTQRVQTLLA 415
            V  + + ++  +  ++ L            +H ++   +P+   G ++  +QR     A
Sbjct: 386 FVDWDDVTRWKMIDKQLGLGMPEPVETYHTSEHLYSDLDIPEA-AGPRLPASQRT----A 440

Query: 416 KPLDQAQEREDVEQTAEESSKVENTKPLRGAPSKEVTKKGASKEGTKWNLTDGQSEEESD 475
             LD A+E ED+E       K  N K  R     + ++ G S   +    + G++   + 
Sbjct: 441 AGLD-AEEVEDLEG----PHKRRNAKGSRHGARAKGSRSGHSGRASSGRASSGKTRSRAG 495

Query: 476 SENDGKPDENGSQRGSKRSK 495
           S    +    G  R SKRS+
Sbjct: 496 SPK--RSSRAGESRDSKRSE 513


>gi|302878537|ref|YP_003847101.1| DEAD/DEAH box helicase [Gallionella capsiferriformans ES-2]
 gi|302581326|gb|ADL55337.1| DEAD/DEAH box helicase domain protein [Gallionella
           capsiferriformans ES-2]
          Length = 461

 Score =  202 bits (513), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 119/361 (32%), Positives = 200/361 (55%), Gaps = 24/361 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +   I + L E+G+ K +PIQ  A P VL G D +  +++GTGK+  F +  L KL+
Sbjct: 6   DLNLAPEILRALIESGYTKPTPIQAQAIPLVLEGSDLMAGAQTGTGKTAAFALPVLQKLM 65

Query: 85  KLPVQQP-------QTIILAPTREIAVQITDVVRSVG--AHVKNLHVDYFIGG----TQV 131
                 P       + +IL PTRE+A+Q+   V++    +H+++L V    GG    TQ 
Sbjct: 66  PFASSSPSPARHAVRALILVPTRELAIQVEASVKAYAKYSHLRSLVV---FGGVDIKTQT 122

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
              +  ++I+V +PGR+   I+ K + ++ V++ ++DEAD++++ GF+ D+  I + LP 
Sbjct: 123 PHLRAGIEILVATPGRLLDHIEQKSVQLNQVQMLVLDEADRMLDMGFMPDLKRILALLPR 182

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
            +Q L+ SAT+S +      +++V+P LI    +      V Q V L+   +  +L    
Sbjct: 183 QRQNLMFSATFSAEIKKLSAEFLVNPKLIEVARSNATSENVTQKVYLVGHEEKHAL---- 238

Query: 252 EEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  LL  T   Q ++F+  +L    I   L    F ++ + G + Q  R+ +LD+F
Sbjct: 239 ----LAHLLRGTGAVQTLVFTKTKLTASRIARQLQREGFASDAIHGDKSQLERMQALDAF 294

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           K GK+ +L+ TD+AARG+D   + +VIN EIP  A  Y+HR+GR GR G  G+ I++V+ 
Sbjct: 295 KSGKITVLIATDVAARGLDIDQLPVVINYEIPSAAEDYVHRIGRTGRAGAFGVAISLVAP 354

Query: 372 E 372
           E
Sbjct: 355 E 355


>gi|66825831|ref|XP_646270.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
           discoideum AX4]
 gi|74897412|sp|Q55D61.1|IF4A_DICDI RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=ATP-dependent RNA helicase tifA
 gi|60474009|gb|EAL71946.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
           discoideum AX4]
          Length = 405

 Score =  202 bits (513), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 200/358 (55%), Gaps = 26/358 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E+ +R G+   GF K S IQ  A   ++ G D I Q++SGTGK+  F + AL 
Sbjct: 34  FESMGLREELLR-GIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIGAL- 91

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRP 137
           + +++ V+ PQ +IL+PTRE+A QI  V  ++ +   N+ V   +GG      V++ +  
Sbjct: 92  QCVEVNVRSPQVLILSPTRELAQQIQKVALAL-SEFMNIQVHACVGGKNLSDDVKKLETG 150

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V IV G+PGR+  MI  K L    +++ I+DEAD++++ GF + I  +Y  LP   Q+++
Sbjct: 151 VHIVSGTPGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQIVL 210

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT + D ++  +K+M  P+ I  +     L G+KQ              +V  EK+  
Sbjct: 211 VSATLTQDVVSMTEKFMTKPVRILLKRDELTLDGIKQF-------------FVSVEKEDW 257

Query: 256 ----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  +       Q VIF N + + + + E + +ANF    + G   QK R   + SF
Sbjct: 258 KFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSF 317

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           + G+ R+L+TTD+ ARGID   V LVIN ++P D   Y+HR+GR+GR+G +G+ I  V
Sbjct: 318 RSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFV 375


>gi|296411733|ref|XP_002835584.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629370|emb|CAZ79741.1| unnamed protein product [Tuber melanosporum]
          Length = 388

 Score =  202 bits (513), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 124/380 (32%), Positives = 205/380 (53%), Gaps = 34/380 (8%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   G+   S +Q  A   +  G D I Q++SGTGK+  F ++ L ++I   
Sbjct: 32  LKEGLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISIL-QVIDTA 90

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           V++ Q ++L+PTRE+A QI  VV ++G ++ N+     IGGT V    R +     +V G
Sbjct: 91  VRETQALVLSPTRELATQIQSVVMALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVSG 149

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI+ + L    +++ ++DEAD+L+N GF E I  +Y  LPP  Q++VVSAT  
Sbjct: 150 TPGRVADMIRRRNLRTKHIKMLVLDEADELLNRGFREQIYDVYRYLPPSTQVVVVSATLP 209

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           +D L    K+M DP+ I  +     L G+KQ    + +          EE K   L  L 
Sbjct: 210 YDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------EEWKFDTLCDLY 259

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +  ANF    + G   QK R A +  F++G  R+L+
Sbjct: 260 DTLTITQAVIFCNTRRKVDWLTEKMREANFTVSAMHGEMPQKERDAIMQEFRQGNSRVLI 319

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           +TD+ ARGID   V L            Y+HR+GR+GR+G +G+ I  V++E +     +
Sbjct: 320 STDVWARGIDVQQVSL-----------NYIHRIGRSGRFGRKGVAINFVTSEDV----RI 364

Query: 381 MGEINLDHAFNVGLVPDNLT 400
           + +I L ++  +  +P N++
Sbjct: 365 LRDIELFYSTQIDEMPMNVS 384


>gi|412991311|emb|CCO16156.1| predicted protein [Bathycoccus prasinos]
          Length = 410

 Score =  202 bits (513), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 121/346 (34%), Positives = 189/346 (54%), Gaps = 19/346 (5%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF K S IQ         G D I Q++SGTGK+  F    L  L    +++ Q 
Sbjct: 50  RGIYAYGFEKPSAIQQRGIVPFAKGLDVIQQAQSGTGKTATFCAGILQSL-NYELEECQA 108

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGRIK 149
           ++LAPTRE+A QI  V+R++G +++ +     +GGT V   +R +Q    +VVG+PGR+ 
Sbjct: 109 LVLAPTRELAQQIEKVMRALGDYLQ-VKCHACVGGTSVREDQRILQAGVHVVVGTPGRVY 167

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            M++ + L  DS+++F +DEAD++++ GF + I  I+  LPP  Q+ V SAT   + L  
Sbjct: 168 DMLRRRALKPDSIKIFSLDEADEMLSRGFKDQIYDIFQLLPPKLQVGVFSATMPPEALEI 227

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL---VQLLSQTPFN 266
            +K+M  P+ I  +     L G+KQ    I +          EE KL   + L       
Sbjct: 228 TRKFMTKPVRILVKRDELTLEGIKQFYVNIDK----------EEWKLETLIDLYETLAIT 277

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q VIF+N + + + + + + + +F      G  DQ  R   +  F+ G  R+L+TTDL A
Sbjct: 278 QSVIFANTRRKVDWLTDKMRSKDFTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 337

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           RGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ +
Sbjct: 338 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTQD 383


>gi|321252954|ref|XP_003192576.1| RNA helicase [Cryptococcus gattii WM276]
 gi|317459045|gb|ADV20789.1| RNA helicase, putative [Cryptococcus gattii WM276]
          Length = 615

 Score =  202 bits (513), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 202/387 (52%), Gaps = 21/387 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +     FE D  + + +  G+   GF + SPIQ  A P  L G D + ++K+GT
Sbjct: 26  QTEDVTATQGSRFE-DFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGT 84

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  LN+ I   +   Q +IL PTRE+A+Q + V +++GAH+ NL V    GGT
Sbjct: 85  GKTASFIIPTLNR-INTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGT 143

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R ++PV I+VG+PGRI  +       ++   +F+MDEADKL++  F+  I   
Sbjct: 144 TLRDDILRLQQPVHILVGTPGRILDLGSKGIAGLNKCSIFVMDEADKLLSEDFMPVIEQT 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            +  P  +Q+++ SAT+         ++MV P  I   D    L GV Q  A        
Sbjct: 204 LALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEINLMDEL-TLKGVTQYYA-------- 254

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              YV+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 255 ---YVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYSCFYSHAKMQQA 311

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV +DL  RGID   V++VIN + P  A +YLHR+GR+GR+G  
Sbjct: 312 HRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYLHRIGRSGRFGHL 371

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHA 389
           GL I++++ E     + +  E+  + A
Sbjct: 372 GLAISLLTLEDRHNLYRIESELGTEIA 398


>gi|451970445|ref|ZP_21923671.1| ATP-dependent RNA helicase DeaD [Vibrio alginolyticus E0666]
 gi|451933531|gb|EMD81199.1| ATP-dependent RNA helicase DeaD [Vibrio alginolyticus E0666]
          Length = 640

 Score =  202 bits (513), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 115/355 (32%), Positives = 200/355 (56%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNK 
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNK- 67

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K   Q
Sbjct: 68  IDLNQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKSGAQ 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           ++VG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VIVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ +P+++        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKKIVERFLREPVMVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|226528292|ref|NP_001149406.1| spliceosome RNA helicase BAT1 [Zea mays]
 gi|195627032|gb|ACG35346.1| spliceosome RNA helicase BAT1 [Zea mays]
          Length = 399

 Score =  202 bits (513), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 127/354 (35%), Positives = 192/354 (54%), Gaps = 18/354 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV+++L ++ 
Sbjct: 51  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 110

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++  + V  F GG  + + K  ++    
Sbjct: 111 --PVAGQVAALVLCHTRELAYQICHEFERFSKYLTEVKVAVFYGGVHIRKHKDLLKNECP 168

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++ +     D+  I+   P  KQ+++
Sbjct: 169 HIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 228

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D  +  L G+ Q    + E         ++ +KL
Sbjct: 229 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE--------AEKNRKL 280

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RL    +FK G  
Sbjct: 281 NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHK 340

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS
Sbjct: 341 KILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 394


>gi|407698821|ref|YP_006823608.1| ATP-dependent RNA helicase [Alteromonas macleodii str. 'Black Sea
           11']
 gi|407247968|gb|AFT77153.1| ATP-dependent RNA helicase [Alteromonas macleodii str. 'Black Sea
           11']
          Length = 608

 Score =  202 bits (513), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 199/360 (55%), Gaps = 16/360 (4%)

Query: 16  SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           + +D+ F+ D+ + +PI Q L++ G+ K SPIQ  + P +L G+D + Q+++GTGK+  F
Sbjct: 3   TTVDMTFK-DLNLPEPILQALEKVGYEKPSPIQAESIPLLLKGHDLLGQAQTGTGKTAAF 61

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQV 131
            +  L   I    ++PQ ++LAPTRE+A+Q+ +  +   +  + + V    GG     Q+
Sbjct: 62  ALPMLAN-IDPEQRKPQLLVLAPTRELAIQVAEAFQVYASFSQKIKVLPVYGGQSYDNQI 120

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
            + KR VQ+VVG+PGRI   IK K L++  ++  ++DEAD+++  GF++D+  I S  P 
Sbjct: 121 RQLKRGVQVVVGTPGRIIDHIKRKTLDLSELKFLVLDEADEMLRMGFIDDVELILSHAPE 180

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI-PECKNPSLRYV 250
            +Q  + SAT         Q+Y+ DP  ++          ++Q    I P  K       
Sbjct: 181 ERQTALFSATMPGPIKKITQRYLKDPKHVKIASKVSTASTIRQRYCQIAPHHKL------ 234

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
              + L +++    F+  +IF   +     + + L+   +  E L+G   Q AR  +++ 
Sbjct: 235 ---EALTRIMEVEVFDGMIIFVRTKTATVELADKLSARGYDVEPLNGDIPQAARERTVEK 291

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            K+GK+ ILV TD+ ARG+D   V  VIN +IP+D+ +Y+HR+GR GR G +G  I  +S
Sbjct: 292 LKQGKIDILVATDVVARGLDVERVSHVINYDIPYDSESYVHRIGRTGRAGRQGDAILFIS 351


>gi|417948598|ref|ZP_12591742.1| ATP-dependent RNA helicase [Vibrio splendidus ATCC 33789]
 gi|342809545|gb|EGU44662.1| ATP-dependent RNA helicase [Vibrio splendidus ATCC 33789]
          Length = 638

 Score =  202 bits (513), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 117/355 (32%), Positives = 192/355 (54%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ + + I   L   GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNK 
Sbjct: 9   NELALNENILSALDSMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAFSLPLLNK- 67

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I L   +PQ II+APTRE+A+Q+   ++++G  +K L V    GG     Q+    R   
Sbjct: 68  INLNQHKPQAIIMAPTRELAIQVAAEIKNLGRDIKGLKVIEIYGGASIVDQMRALSRGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K ++    L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLLTRDRLHLDEAHTFVLDEADEMLKMGFVDDVTWILEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        + +Y+ +P  +        +  V Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMVKTIVDRYLRNPAKVDVAGTNHTVDKVAQNFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|302806860|ref|XP_002985161.1| hypothetical protein SELMODRAFT_446187 [Selaginella moellendorffii]
 gi|300146989|gb|EFJ13655.1| hypothetical protein SELMODRAFT_446187 [Selaginella moellendorffii]
          Length = 473

 Score =  202 bits (513), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 125/356 (35%), Positives = 191/356 (53%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 51  DFLLKPELVRAIVDCGFEHPSEVQFECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIE 110

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            L   Q   ++L  TRE+A QI         ++ ++ V  F GG  ++  K  ++     
Sbjct: 111 PLK-GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKTHKDLLKNECPH 169

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI Q+ + K L++  VR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 170 IVVGTPGRILQLTREKELSLKGVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMF 229

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +++M DP+ I  +D  +  L G+ Q    + E         ++ +KL 
Sbjct: 230 SATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE--------AEKNRKLN 281

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  R
Sbjct: 282 DLLDALDFNQVVIFVKSVNRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 341

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT V++ +
Sbjct: 342 ILVATDLVGRGIDIERVNIVINYDMPESADTYLHRVGRAGRFGTKGLAITFVASST 397


>gi|50555013|ref|XP_504915.1| YALI0F02695p [Yarrowia lipolytica]
 gi|74632960|sp|Q6C347.1|FAL1_YARLI RecName: Full=ATP-dependent RNA helicase FAL1
 gi|49650785|emb|CAG77720.1| YALI0F02695p [Yarrowia lipolytica CLIB122]
          Length = 397

 Score =  201 bits (512), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 127/377 (33%), Positives = 205/377 (54%), Gaps = 22/377 (5%)

Query: 11  TKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           +KDV  ++   FE+  L +  +R G+   GF   S IQ  A   ++ G D I Q++SGTG
Sbjct: 17  SKDV--DVTPTFESMDLKDDLLR-GIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTG 73

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ 130
           K+  F ++ L ++I    ++ Q ++L+PTRE+A QI  V+ ++G ++ N+     IGGT 
Sbjct: 74  KTATFSISML-EVIDTKHRETQAMVLSPTRELATQIQSVILALGDYM-NVQCHACIGGTS 131

Query: 131 VERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
           +    + +    Q+V G+PGR   MIK   L   ++++ I+DEAD+L+N GF E I  IY
Sbjct: 132 LSVDMKKLEAGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADELLNKGFQEQIYDIY 191

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPS 246
             LP   Q++VVSAT  H  L    K+M DP+ I  +     L G+KQ    + +     
Sbjct: 192 RYLPAATQVVVVSATLPHSVLEMTSKFMTDPVRILVKRDELTLEGLKQYFIAVEQ----- 246

Query: 247 LRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
                EE K   L  L       Q VIF N + + + + + + + NF    + G   QK 
Sbjct: 247 -----EEWKFDTLCDLYDTLTITQAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKD 301

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R + ++ F+ G+ R+L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G
Sbjct: 302 RDSIMNEFRSGRSRVLISTDVWARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRKG 361

Query: 364 LVITIVSAESLVKFHSL 380
           + I   + + +     +
Sbjct: 362 VAINFATNDDITTLRDI 378


>gi|323491514|ref|ZP_08096694.1| ATP-dependent RNA helicase DeaD [Vibrio brasiliensis LMG 20546]
 gi|323314239|gb|EGA67323.1| ATP-dependent RNA helicase DeaD [Vibrio brasiliensis LMG 20546]
          Length = 643

 Score =  201 bits (512), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 136/434 (31%), Positives = 224/434 (51%), Gaps = 34/434 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNDSILSALDGMGFVSPTPIQAAAIPHLLAGKDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   V+++G ++  L V    GG     Q+   K    
Sbjct: 69  -DLAQRKPQAIVLAPTRELAIQVAAEVKNLGKNIAGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR++ +I    L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 IVVGTPGRVQDLINRDRLHLDEVHTFVLDEADEMLNMGFVDDVTEIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT      + +++++ DP  I        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKSIVERFLRDPETIDVAGKNHTVDKVEQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKASALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    L    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQLRMLRT 359

Query: 380 L-------MGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVEQTAE 432
           +       M EI L H   V                R+  L A+ L+  +E + +E+ AE
Sbjct: 360 IERVTKSSMEEIQLPHRDKVA-------------EARLAKLGAE-LETEKEHKALEKFAE 405

Query: 433 ESSKVENTKPLRGA 446
              K++ +  L  A
Sbjct: 406 LVDKLQESLELDAA 419


>gi|115437448|ref|NP_001043298.1| Os01g0550000 [Oryza sativa Japonica Group]
 gi|75320875|sp|Q5JK84.1|RH15_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 15
 gi|57899408|dbj|BAD88055.1| putative HLA-B associated transcript 1 [Oryza sativa Japonica
           Group]
 gi|57900053|dbj|BAD88115.1| putative HLA-B associated transcript 1 [Oryza sativa Japonica
           Group]
 gi|113532829|dbj|BAF05212.1| Os01g0550000 [Oryza sativa Japonica Group]
 gi|215768539|dbj|BAH00768.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218188434|gb|EEC70861.1| hypothetical protein OsI_02373 [Oryza sativa Indica Group]
          Length = 432

 Score =  201 bits (512), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 129/357 (36%), Positives = 196/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV+++L ++ 
Sbjct: 55  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 114

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++  + V  F GG  +++ K  ++    
Sbjct: 115 --PVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP 172

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++++     D+  I+   P  KQ+++
Sbjct: 173 HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 232

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D  +  L G+ Q    + E         ++ +KL
Sbjct: 233 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE--------AEKNRKL 284

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL    +FK G  
Sbjct: 285 NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHK 344

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A +YLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 345 RILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSAS 401


>gi|317575817|ref|NP_001187807.1| spliceosome RNA helicase bat1 [Ictalurus punctatus]
 gi|308324021|gb|ADO29146.1| spliceosome RNA helicase bat1 [Ictalurus punctatus]
          Length = 426

 Score =  201 bits (512), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 125/380 (32%), Positives = 204/380 (53%), Gaps = 18/380 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D +++  + + + + GF   S +Q    P  +   D + Q+KSG GK+ VFV+A L +L 
Sbjct: 47  DFILKPEVLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLD 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP-----KRPVQ 139
                  + ++L  TRE+A QI+        ++  + V  F GG  + R      K    
Sbjct: 107 PEEEGMTRVLVLCHTRELAYQISKEYERFSKYMPKIKVGVFFGGMPLRRDIESFGKGAPH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +I+ K L +D+++ FI+DE DK+++T     D+  I+ Q P  KQ+++ 
Sbjct: 167 IVVGTPGRILDLIRNKALKLDNIKHFIIDECDKMLDTLDMRRDVQDIFRQTPRSKQVMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPE-DATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S D     + +M DPL I  + D+   L G++Q    + E         ++ +KL 
Sbjct: 227 SATMSKDIRPVCRNFMQDPLEIFIDNDSKLTLHGLRQHYVKVKEN--------EKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +LL +  FNQ +IF     R   +C+ L + NF A  +  +  Q+ RL    +FK  + R
Sbjct: 279 ELLDELQFNQVIIFVKSVQRCIALCQLLVDQNFPAIAMHRSMSQEERLERYQAFKNFQKR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +LV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT +S E   + 
Sbjct: 339 LLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDEHDAE- 397

Query: 378 HSLMGEINLDHAFNVGLVPD 397
             ++ ++      N+  +PD
Sbjct: 398 --ILNDVQNRFEVNISELPD 415


>gi|321453633|gb|EFX64849.1| hypothetical protein DAPPUDRAFT_219465 [Daphnia pulex]
          Length = 425

 Score =  201 bits (512), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 125/379 (32%), Positives = 207/379 (54%), Gaps = 21/379 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  I + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 47  DFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDVLCQAKSGMGKTAVFVLATLQQL- 105

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
           ++   Q   ++L  TRE+A QI+        ++  + V  F GG  + + ++ ++     
Sbjct: 106 EMVENQVSVLVLCHTRELAFQISKEYERFSKYMTTIKVGVFFGGLNIAKDEQTLKSNCPH 165

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +++ K LN+ +++ F++DE DK++       D+  I+   P  KQ+++ 
Sbjct: 166 IVVGTPGRILALVRSKKLNLRTLKHFVLDECDKMLEALDMRRDVQEIFRNTPHEKQVMMF 225

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ +  +D ++  L G++Q            L+  ++ +KL 
Sbjct: 226 SATLSKEIRPVCKKFMQDPMEVYVDDESKLTLHGLQQHYV--------KLKDNEKNRKLF 277

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +LL    FNQ VIF     R   +C+ L   NF A  +  +  Q+ RL+    FK  K R
Sbjct: 278 ELLDVLEFNQVVIFVKSIQRCMALCQLLGEQNFPAIAIHRSMTQEERLSRYQQFKDFKKR 337

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           ILV TDL  RG+D   V++V N ++P ++ +YLHR+ RAGR+GT+GL IT VS E+  K 
Sbjct: 338 ILVATDLFGRGMDIERVNIVFNYDMPENSDSYLHRVARAGRFGTKGLGITFVSDENDAKV 397

Query: 378 HSLMGEINLDHAFNVGLVP 396
            +     ++   F+V + P
Sbjct: 398 LN-----DVQERFDVSITP 411


>gi|226506726|ref|NP_001141599.1| uncharacterized protein LOC100273717 [Zea mays]
 gi|224032233|gb|ACN35192.1| unknown [Zea mays]
          Length = 429

 Score =  201 bits (512), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/357 (36%), Positives = 194/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV+++L ++ 
Sbjct: 52  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 111

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++  + V  F GG  + + K  ++    
Sbjct: 112 --PVAGQVAALVLCHTRELAYQICHEFERFSKYLTEVKVAVFYGGVHIRKHKDLLKNECP 169

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++ +     D+  I+   P  KQ+++
Sbjct: 170 HIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 229

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D A   L G+ Q            L   ++ +KL
Sbjct: 230 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEAEKNRKL 281

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RL S  +FK G  
Sbjct: 282 NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMTQEERLTSYKNFKEGHK 341

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 342 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 398


>gi|367001570|ref|XP_003685520.1| hypothetical protein TPHA_0D04520 [Tetrapisispora phaffii CBS 4417]
 gi|357523818|emb|CCE63086.1| hypothetical protein TPHA_0D04520 [Tetrapisispora phaffii CBS 4417]
          Length = 502

 Score =  201 bits (512), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 130/387 (33%), Positives = 202/387 (52%), Gaps = 22/387 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  + G D + ++K+GT
Sbjct: 22  QTEDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEESIPVAIAGRDILARAKNGT 80

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVR++G   + +      GGT
Sbjct: 81  GKTAAFVIPTLEK-VKSKINKIQALIMVPTRELALQTSQVVRTLGKRCE-ISCMVTTGGT 138

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V I+VG+PGR+  +      ++    LFIMDEADK+++  F   I  I
Sbjct: 139 NLRDDIIRLNETVHILVGTPGRVLDLASRGIADLSGCGLFIMDEADKMLSRDFKSIIEQI 198

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            + LP   Q L+ SAT+       + K++  P  I   D    L G+ Q  A        
Sbjct: 199 LTFLPEQHQSLLFSATFPLTVKEFMVKHLHKPYEINLMDEL-TLKGITQYYA-------- 249

Query: 246 SLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + + +  F   Y      Q+
Sbjct: 250 ---FVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGFSCYYSHARMKQQ 306

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 307 ERNRVFHEFRHGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 366

Query: 363 GLVITIVSAESLVKFHSLMGEINLDHA 389
           GL I +++       + +  E+  + A
Sbjct: 367 GLAINLINWNDRFNLYKIEQELGTEIA 393


>gi|154324134|ref|XP_001561381.1| eukaryotic initiation factor 4A [Botryotinia fuckeliana B05.10]
 gi|160395528|sp|A6RJ45.1|IF4A_BOTFB RecName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=Translation initiation factor 1
 gi|347829815|emb|CCD45512.1| similar to eukaryotic initiation factor 4a-i [Botryotinia
           fuckeliana]
          Length = 398

 Score =  201 bits (512), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 140/396 (35%), Positives = 217/396 (54%), Gaps = 31/396 (7%)

Query: 16  SNIDVLFEN-DVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSI 73
           SN D   ++ D +  KP + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+ 
Sbjct: 18  SNYDETVDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTA 77

Query: 74  VFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER 133
            F ++ L KL    V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V  
Sbjct: 78  TFSISVLQKL-DPNVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVRD 135

Query: 134 PKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQL 189
             + +Q    +VVG+PGR+  MI+ ++L  DS+++F++DEAD++++ GF E I  I+  L
Sbjct: 136 DMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLL 195

Query: 190 PPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRY 249
           P   Q++++SAT   D L    K+M DP+ I  + A   L G+KQ              Y
Sbjct: 196 PQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKAELTLEGIKQF-------------Y 242

Query: 250 VDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKA 303
           +  EK+      L  L       Q VIF N + + + + + L   +F    + G  DQ  
Sbjct: 243 IAVEKEDWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQ 302

Query: 304 RLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           R   +  F+ G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G
Sbjct: 303 RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG 362

Query: 364 LVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
           + I  V+A+ +     +M EI   ++  +  +P N+
Sbjct: 363 VAINFVTADDV----RMMREIEQFYSTQIEEMPMNV 394


>gi|308162755|gb|EFO65133.1| Translation initiation factor eIF-4A, putative [Giardia lamblia
           P15]
          Length = 391

 Score =  201 bits (512), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 119/355 (33%), Positives = 201/355 (56%), Gaps = 13/355 (3%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
           G+   G+   S IQ  A   +++G D I Q++SGTGK+  F +  L + I L ++ PQ I
Sbjct: 34  GIFTYGYKTPSAIQSQAIVPIISGKDTIAQAQSGTGKTAAFTIGMLQR-IDLALKSPQAI 92

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---IVVGSPGRIKQM 151
           IL+PTRE+A+Q   VV  +G+ ++ + V   IGGTQV+      Q   ++V +PGR+  +
Sbjct: 93  ILSPTRELALQTLKVVDGIGSRLE-VQVAQCIGGTQVDDDIAAAQSCHLIVATPGRLLSL 151

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQ 211
           ++ KY+   +V++ ++DEAD++++ GF E I  I   +    Q+++VSAT   + L   +
Sbjct: 152 LQKKYVTTSNVKMVVLDEADEMLSRGFTEQIVSIMKFMNADIQIVLVSATLPPEILELTR 211

Query: 212 KYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIF 271
           ++M DP+ I  ++A   L G++Q V  + +     +  V++  K++ +       Q VIF
Sbjct: 212 QFMRDPVSILVKEAELTLDGIRQYVVDLQDAWKAEV--VEDIYKVLSV------QQGVIF 263

Query: 272 SNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDA 331
            N   R + + E L +A      +    DQ  R   +  F+ G+ RIL+ T++ ARGID 
Sbjct: 264 CNSIGRVKELAEKLKSAGHTLSCIHSELDQAERNKIMGEFRSGQTRILIATNIIARGIDV 323

Query: 332 ANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINL 386
            NV LVIN +IP +  TYLHR+GR+GR+G +G+ I  V+ +      ++  + N+
Sbjct: 324 QNVSLVINYDIPREPETYLHRIGRSGRFGRKGVAINFVTEKDKQSMQAITDKFNV 378


>gi|389870840|ref|YP_006378259.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
 gi|388536089|gb|AFK61277.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
          Length = 546

 Score =  201 bits (512), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 193/347 (55%), Gaps = 24/347 (6%)

Query: 36  LQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ---PQ 92
           L + GF + +P+Q  A P  L G D IV +++G+GK+  F++ +L+++  +P  +    Q
Sbjct: 16  LNKAGFTQPTPVQTEAIPKALEGKDLIVSAQTGSGKTAAFMLPSLHRIAGMPGNKGVGVQ 75

Query: 93  TIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVGSPGRI 148
            ++L PTRE+A+Q+ +  +S G  + +L +   +GG     Q++   R V ++V +PGR+
Sbjct: 76  VLVLTPTRELALQVAEATKSYGVGIDDLRIATVVGGMPYGAQIKALSRRVDVLVATPGRL 135

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLA 208
              +  + +N+  V   ++DEAD++++ GF+EDI  I +Q P  +Q L+ SAT+    +A
Sbjct: 136 IDHLNARRVNLSRVHTLVLDEADRMLDMGFIEDIESIVAQTPNDRQTLMFSATF-EGTVA 194

Query: 209 TLQKYMVD-PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEE----KKLVQLLSQT 263
            L   M++ PL I        + G KQ  A I +    +L Y D+     + L  LL   
Sbjct: 195 RLAADMLNNPLRID-------IAGQKQKHANITQ----TLLYADDSGHKLRLLGHLLRDA 243

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
             +Q ++F++ +   + + E L +  F A  L G  +Q+ R  +L   ++G++R+LV TD
Sbjct: 244 SMDQAIVFTSTKRGADALAERLEDEGFAASALHGDMNQRQRTRTLGMLQKGRLRVLVATD 303

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARGID   +   IN ++P  A  Y+HR+GR GR G  G   T+ +
Sbjct: 304 VAARGIDVQGISHAINFDLPMQAEDYVHRIGRTGRAGRNGQAFTLAT 350


>gi|78186470|ref|YP_374513.1| DEAD/DEAH box helicase-like protein [Chlorobium luteolum DSM 273]
 gi|78166372|gb|ABB23470.1| ATP-dependent RNA helicase CsdA [Chlorobium luteolum DSM 273]
          Length = 590

 Score =  201 bits (512), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 112/350 (32%), Positives = 187/350 (53%), Gaps = 13/350 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ + +PI + L+E G+   +PIQ    P +L G D + Q+++GTGK+  F +  L+  I
Sbjct: 14  DLNLSEPIMRALKEVGYETPTPIQARTIPLMLEGRDVLGQAQTGTGKTAAFALPILSG-I 72

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
            L +  PQ ++LAPTRE+A+Q+ +       ++K  HV    GG     Q+   KR V +
Sbjct: 73  DLSLTDPQVLVLAPTRELAIQVAEAFHKYAEYLKGFHVLPIYGGQDYGGQLRMLKRGVHV 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++   LN+DS++  ++DEAD+++  GF++D+ WI  + P  +Q+ + SA
Sbjct: 133 VVGTPGRVMDHMRRGSLNLDSLQCLVLDEADEMLRMGFIDDVEWILGETPKERQVALFSA 192

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T         QKY+  P  +  E  T  +  ++Q   ++       +        L ++L
Sbjct: 193 TMPAPIRRIAQKYLNSPAEVTIEGKTTTVETIRQRYWIVGGSHKLDI--------LTRIL 244

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
              PF   +IF   +     + E L    + A  L+G   Q  R  ++D  K G + I++
Sbjct: 245 EVEPFEGMLIFVRTKTMTLELAEKLQARGYAAAALNGDMVQNQRERTVDQLKDGSLNIVI 304

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            TD+AARG+D   +  VIN ++P+D  +Y+HR+GR GR G  G  I  V+
Sbjct: 305 ATDVAARGLDVERISHVINYDVPYDTESYVHRIGRTGRAGRSGEAILFVA 354


>gi|126175951|ref|YP_001052100.1| DEAD/DEAH box helicase [Shewanella baltica OS155]
 gi|152999102|ref|YP_001364783.1| DEAD/DEAH box helicase [Shewanella baltica OS185]
 gi|217971789|ref|YP_002356540.1| DEAD/DEAH box helicase [Shewanella baltica OS223]
 gi|386342704|ref|YP_006039070.1| DEAD/DEAH box helicase [Shewanella baltica OS117]
 gi|125999156|gb|ABN63231.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS155]
 gi|151363720|gb|ABS06720.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS185]
 gi|217496924|gb|ACK45117.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS223]
 gi|334865105|gb|AEH15576.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS117]
          Length = 640

 Score =  201 bits (512), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 244/480 (50%), Gaps = 38/480 (7%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + + L E G+ K +PIQ A+   ++ G D + Q+++GTGK+  F +  LNK+       P
Sbjct: 17  LLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVTSQ--TTP 74

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+AVQ+ +   S    +KN HV    GG     Q+   KR  Q++VG+PGR
Sbjct: 75  QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQVIVGTPGR 134

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   L +DS++  ++DEAD+++  GF++DI WI    P  +Q+ + SAT      
Sbjct: 135 VMDHMRRGTLKLDSLQALVLDEADEMLKMGFIDDIEWILEHTPSERQLALFSATMPEQIK 194

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV-----DEEKKLVQLLSQ 262
               +++ +P+ +R E +   +  ++Q             R+V     ++ + LV++L  
Sbjct: 195 RVANQHLRNPVHVRIESSQTTVESIEQ-------------RFVQVSQHNKLEALVRVLEV 241

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
                 +IF   +     + E L    + +  L G  +Q+AR  ++D  KRGK+ IL+ T
Sbjct: 242 ENTEGVIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDILIAT 301

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+AARG+D   +  V+N +IP+DA  Y+HR+GR GR G  G+ I  V++  +    +   
Sbjct: 302 DVAARGLDVERIGHVVNYDIPYDAEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRT--- 358

Query: 383 EINLDHAFNVGLVPDNLTGDQINWTQRVQTL---LAKPL--DQAQEREDVEQTAEESSKV 437
              ++ + N  + P  +   +    +R+  L   LA+ +  D    +E V Q  ++    
Sbjct: 359 ---IERSTNSRISPMKIPSPETVAERRLSRLGEQLAETINGDLDFMKEAVAQLCQQLEV- 414

Query: 438 ENTKPLRGAPSKEVTK-KGASKEGTKWNLTDGQSEEESDSENDGKPDENGSQRGSKRSKE 496
            +T  L  A  ++V + +       +  + D +SE    S+     ++ G +RG +RS+E
Sbjct: 415 -DTDLLAAALLQQVQQERPLQLPAIQERVRDERSERTERSDRGSDRNDRGGERGERRSRE 473


>gi|312881457|ref|ZP_07741251.1| ATP-dependent RNA helicase DeaD [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370879|gb|EFP98337.1| ATP-dependent RNA helicase DeaD [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 620

 Score =  201 bits (512), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 133/434 (30%), Positives = 227/434 (52%), Gaps = 34/434 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ A+ P+++ G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNDAILSALDGMGFVSPTPIQAASIPHLMKGSDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
            +L  ++PQ I+LAPTRE+A+Q+   ++++G ++  L V    GGT    Q+   K    
Sbjct: 69  -ELSQRKPQAIVLAPTRELAIQVAAEIKNLGQNISGLKVLEIYGGTSIVDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR++ +I    L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 IVVGTPGRVQDLINRDRLHLDEVHTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ +P+ I        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLRNPITIDVAGKNHTVDKVEQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKASALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    L    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQLRMLRT 359

Query: 380 L-------MGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVEQTAE 432
           +       M EI L H   V                R++ L A+ L+  +E + +E+  E
Sbjct: 360 IERVTKSTMEEIQLPHRDKVA-------------AARLEKLGAE-LETEKEHKALEKFTE 405

Query: 433 ESSKVENTKPLRGA 446
              K+++T  L  A
Sbjct: 406 LVEKLQDTLELDAA 419


>gi|225850461|ref|YP_002730695.1| dead/deah box helicase domain protein [Persephonella marina EX-H1]
 gi|225644960|gb|ACO03146.1| dead/deah box helicase domain protein [Persephonella marina EX-H1]
          Length = 403

 Score =  201 bits (512), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 115/354 (32%), Positives = 203/354 (57%), Gaps = 18/354 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           ND  I K     +++ GF K + +Q    P +L G D I Q+++GTGK+  F +  + + 
Sbjct: 14  NDFQISKETLNSIRKMGFKKPTEVQEKTIPLILEGKDIIAQAQTGTGKTAAFGIPIV-ET 72

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT---QVERPKRPVQI 140
           +    ++ Q ++L PTRE+A+Q+T  ++ +G   +   +  + G +   Q++  K+   +
Sbjct: 73  VNTKSRKIQALVLVPTRELAIQVTKEIKDIGREKRIFALAVYGGKSIRHQIDFLKKGKDV 132

Query: 141 V-VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           V VG+PGRIK +I+ K LN++ V++F++DEAD++++ GF+EDI +I+ Q PP+KQ L+ S
Sbjct: 133 VIVGTPGRIKDLIERKVLNLNDVKIFVLDEADRMLDMGFIEDIEFIFEQTPPVKQTLLFS 192

Query: 200 ATYSHDNLATLQKYMVDP---LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           AT     +   ++++ D    + I+PE+ T  +  +KQ    +   K        E + L
Sbjct: 193 ATMPKAIMRLAERFLNDDYEIVKIKPEEVT--VDRIKQKAYRVDTGK--------EFETL 242

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L++    + ++F+  +   + + + L    F A+ + G   Q  R   L  F+R ++
Sbjct: 243 TKILNENEGKKSIVFTETKRGADELSKKLRREGFNADAIHGDYSQAKRERVLRDFRRNRI 302

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            ILV TD+AARG+D   VD+V N  +P D  +Y+HR+GR GR G  GL I+I+S
Sbjct: 303 DILVATDVAARGLDIKGVDVVYNYSLPRDVESYIHRIGRTGRAGKDGLAISIIS 356


>gi|440640595|gb|ELR10514.1| ATP-dependent RNA helicase eIF4A [Geomyces destructans 20631-21]
          Length = 398

 Score =  201 bits (512), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 134/376 (35%), Positives = 207/376 (55%), Gaps = 29/376 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L KL    ++Q Q 
Sbjct: 38  RGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKL-DPNIKQCQA 96

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGRIK 149
           +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    IVVG+PGR+ 
Sbjct: 97  LILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALQEGPQIVVGTPGRVH 155

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MI+ ++L  DS+++F++DEAD++++ GF E I  I+  LP   Q++++SAT   D L  
Sbjct: 156 DMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEV 215

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLLSQT 263
             K+M DP+ I  + A   L G+KQ              Y+  EK+      L  L    
Sbjct: 216 TTKFMRDPVRILVKKAELTLEGIKQF-------------YIAVEKEDWKLDTLSDLYETV 262

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  R+L+ TD
Sbjct: 263 TITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATD 322

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGE 383
           L ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +     +M E
Sbjct: 323 LLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV----RMMRE 378

Query: 384 INLDHAFNVGLVPDNL 399
           I   ++  +  +P N+
Sbjct: 379 IEQFYSTQIEEMPMNV 394


>gi|302414618|ref|XP_003005141.1| ATP-dependent RNA helicase eIF4A [Verticillium albo-atrum VaMs.102]
 gi|261356210|gb|EEY18638.1| ATP-dependent RNA helicase eIF4A [Verticillium albo-atrum VaMs.102]
 gi|346979398|gb|EGY22850.1| ATP-dependent RNA helicase eIF4A [Verticillium dahliae VdLs.17]
          Length = 397

 Score =  201 bits (512), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 135/383 (35%), Positives = 211/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G D I Q++SGTGK+  F ++ L K 
Sbjct: 27  DDMELKSELLRGVYAYGFERPSAIQARAIMPVVKGNDVIAQAQSGTGKTATFSISVLQK- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 86  IDPAVKQCQALILAPTRELAQQIQKVVIAIGDFM-NIECHACIGGTSVRDDMKALQDGPQ 144

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  DS+++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 145 VVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 204

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 205 ATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 254

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 255 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSS 314

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +  
Sbjct: 315 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDV-- 372

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 373 --RMMREIEQFYSTQIEEMPMNV 393


>gi|366988431|ref|XP_003673982.1| hypothetical protein NCAS_0A10430 [Naumovozyma castellii CBS 4309]
 gi|342299845|emb|CCC67601.1| hypothetical protein NCAS_0A10430 [Naumovozyma castellii CBS 4309]
          Length = 399

 Score =  201 bits (512), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 123/360 (34%), Positives = 200/360 (55%), Gaps = 28/360 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I L  +  Q 
Sbjct: 36  RGIYSYGFETPSSIQSRAITRIISGSDIIAQAQSGTGKTATFAIGML-QIIDLKKKDLQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV-----QIVVGSPGRI 148
           +IL+PTRE+AVQI  VV ++G ++ N+      GG  ++   + V     Q+V G+PGR+
Sbjct: 95  LILSPTRELAVQINQVVSNLGDYM-NVKSLAMTGGKMMKDDLKKVSKSGCQVVSGTPGRV 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLI--NTGFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L + ++++ ++DEAD+L+  + GF + I  I+++LP   Q++VVSAT S D 
Sbjct: 154 LDMIKRQLLAIRNIQMLVLDEADELLGESLGFKQQIYDIFAKLPKSCQVVVVSATMSKDI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD---EEKK---LVQLL 260
           +   +K+M DP+ I  +     L G+KQ              YVD   EE K   L  + 
Sbjct: 214 IEVTKKFMSDPVKILVKQDEISLEGIKQY-------------YVDVGKEEWKFDTLCDIY 260

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 QCVIF N + + + +   L  +NF    + G   Q+ R   ++ F+ G  R+L+
Sbjct: 261 DSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLI 320

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           +TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  +++     F  +
Sbjct: 321 STDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFGRKGIAINFLTSSDGSTFRDI 380


>gi|340905028|gb|EGS17396.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
           var. thermophilum DSM 1495]
          Length = 397

 Score =  201 bits (512), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 136/381 (35%), Positives = 209/381 (54%), Gaps = 30/381 (7%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K I   +
Sbjct: 32  KPELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK-IDPNL 90

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGS 144
           +Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    IVVG+
Sbjct: 91  KQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVREDMKALQEGPQIVVGT 149

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  MI+ ++L  D++++F++DEAD++++ GF E I  I+  LP   Q++++SAT   
Sbjct: 150 PGRVHDMIQRRFLKTDAMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQ 209

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQ 258
           D L    K+M DP+ I  +     L G+KQ              Y+  EK+      L  
Sbjct: 210 DVLEVTTKFMRDPVRILVKKDELTLEGIKQF-------------YIAVEKEEWKLDTLSD 256

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           L       Q VIF N + + + + E L   +F    + G  DQ  R   +  F+ G  R+
Sbjct: 257 LYETVTITQAVIFCNTRRKVDWLTEKLTQRDFTVSAMHGDMDQAQRDLIMKEFRSGSSRV 316

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFH 378
           L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +    
Sbjct: 317 LIATDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTAEDV---- 372

Query: 379 SLMGEINLDHAFNVGLVPDNL 399
            +M EI   ++  +  +P N+
Sbjct: 373 RMMREIEQFYSTQIEEMPMNV 393


>gi|281203514|gb|EFA77714.1| DEAD/DEAH box helicase domain-containing protein [Polysphondylium
           pallidum PN500]
          Length = 400

 Score =  201 bits (511), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 125/362 (34%), Positives = 198/362 (54%), Gaps = 14/362 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + K + +G+   GF K S IQ  A   +  G D I Q++SGTGK+  F +  L++ I + 
Sbjct: 35  LPKDLLRGVYSYGFEKPSAIQQRAIMPLAKGLDIIAQAQSGTGKTATFTIGILSQ-ININ 93

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVG 143
           + + Q +I+APTRE+A QI  VV S+G ++K +     IGGT+V    +  +  V IVVG
Sbjct: 94  LMKCQALIIAPTRELAQQIQKVVTSLGEYLK-IKCYACIGGTRVSDDVQNLQNGVHIVVG 152

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+ +M+    +  +SV++F++DEAD++++ GF + I  I+  LP   Q+ + SAT +
Sbjct: 153 TPGRVYEMLSRGVITRESVKIFVLDEADEMLSRGFKDQIYEIFRLLPLDIQVGLFSATMT 212

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
            + L+   K+M +P+ I  +     L G++Q    +   +       D    L + LS T
Sbjct: 213 EETLSITHKFMKEPVKILVKKDELTLEGIRQFYVNVGPAEQGKF---DVLTDLYETLSIT 269

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF N + + + +   +    F      G  DQK R   L SF+ G  R+L+TTD
Sbjct: 270 ---QSVIFCNTRRKVDWLTTKMTEQQFTVSSTHG--DQKDRDGILQSFRSGTTRVLITTD 324

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGE 383
           L ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  ++     K   L   
Sbjct: 325 LLARGIDVQQVSLVINFDLPLNLENYIHRIGRSGRFGRKGVAINFITQNEQEKIQDLCSH 384

Query: 384 IN 385
            N
Sbjct: 385 YN 386


>gi|384250998|gb|EIE24476.1| RNA helicase 2 [Coccomyxa subellipsoidea C-169]
          Length = 406

 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/354 (34%), Positives = 200/354 (56%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++P+ +G+ + GF K S IQ  A   ++ G D I Q++SGTGK+ +  ++ L +L+   
Sbjct: 40  LKEPLLRGVYQFGFEKPSAIQQRAILPIVQGRDVIAQAQSGTGKTSMIAIS-LAQLLDPK 98

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVG 143
           + +PQ++IL+PTRE+A Q T  +++V   +K +     +GGT + +    ++    IV G
Sbjct: 99  LNEPQSLILSPTRELAAQTTKTIQAVAEFMK-VRAHTCVGGTSLGKDMSLLEAGQHIVSG 157

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   S++  ++DEAD+++N GF E I  +Y  LPP  Q+++VSAT  
Sbjct: 158 TPGRVFDMIKRRCLATRSIKTLVLDEADEMLNKGFKEQIYDVYRYLPPDTQVVLVSATLP 217

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            + L    K+M DPL +  +     L G+KQ    + +          EE K   L  L 
Sbjct: 218 GEVLEMTSKFMTDPLRVLVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 267

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E +   NF    + G   QK R A +  F+ G  R+L+
Sbjct: 268 DTLTITQAVIFCNTKRKVDWLTEKMRQNNFTVSAMHGDMPQKERDAIMGEFRGGHSRVLI 327

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +TD+ ARG+D   V LVIN ++P++   Y+HR+GR+GRYG +G+ I  V ++ +
Sbjct: 328 STDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRYGRKGVAINFVRSDDI 381


>gi|448518907|ref|XP_003867999.1| Fal1 protein [Candida orthopsilosis Co 90-125]
 gi|380352338|emb|CCG22564.1| Fal1 protein [Candida orthopsilosis]
          Length = 399

 Score =  201 bits (511), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 195/347 (56%), Gaps = 17/347 (4%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   ++ G D I Q++SGTGK+  F +  L + I    +  Q 
Sbjct: 39  KGIYAYGFEAPSAIQSRAIMQIIAGRDTIAQAQSGTGKTATFSIGML-EAIDSKSKDCQA 97

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQIVVGSPGRIK 149
           +IL+PTRE+A+QI +VV+ +G ++ N+H    IGG  V    ++ ++  Q+V G+PGR+ 
Sbjct: 98  LILSPTRELAIQIQNVVQHLGDYM-NIHTYACIGGKNVGMDIKKLQQGQQVVSGTPGRVL 156

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            +I+ + L+   +++ I+DEAD+L   GF E I  IY QLP   Q++VVSAT   + L  
Sbjct: 157 DIIRRRNLSTRHIKILILDEADELFTKGFKEQIYEIYKQLPYDTQVVVVSATLPPEVLEM 216

Query: 210 LQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
             K+  DP  +L++ +D +  L+G+KQ      +C+    ++      L  L       Q
Sbjct: 217 TSKFTTDPVKILVKRDDVS--LVGIKQYYV---QCEQEDWKF----DTLCDLYDNLTITQ 267

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            VIF N +++   + + +   NF    + G   Q  R + +  F+ G  R+L++TD+ AR
Sbjct: 268 AVIFCNTKMKVNWLTDQMRKQNFVVSSMHGDMKQDERDSIMSDFRTGNSRVLISTDVWAR 327

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           GID   + LVIN ++P+D   Y+HR+GR+GR+G +G  I +++   L
Sbjct: 328 GIDVQQISLVINYDLPNDKENYIHRIGRSGRFGRKGTAINLITRGDL 374


>gi|367048325|ref|XP_003654542.1| hypothetical protein THITE_2117632 [Thielavia terrestris NRRL 8126]
 gi|347001805|gb|AEO68206.1| hypothetical protein THITE_2117632 [Thielavia terrestris NRRL 8126]
          Length = 556

 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/369 (36%), Positives = 199/369 (53%), Gaps = 26/369 (7%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 37  QTEDVTNTKGLDFE-DFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFI--G 127
           GK+  FV+ AL K I   V + Q +IL PTRE+A+Q + V +++G   KNL ++  +  G
Sbjct: 96  GKTAAFVIPALEK-INPKVSKIQCLILVPTRELAMQTSQVCKTLG---KNLGINVMVTTG 151

Query: 128 GT----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
           GT     + R + PV IVVG+PGRI  +   +  ++    +FIMDEADKL++  F   I 
Sbjct: 152 GTGLRDDIVRLQDPVHIVVGTPGRILDLASKQVADLSECPMFIMDEADKLLSVEFTPVIE 211

Query: 184 WIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECK 243
            +    P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A      
Sbjct: 212 QLLQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA------ 264

Query: 244 NPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQD 300
                YV+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      
Sbjct: 265 -----YVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMA 319

Query: 301 QKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYG 360
           Q+AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG
Sbjct: 320 QQARNRVFHDFRNGACRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYG 379

Query: 361 TRGLVITIV 369
             GL I ++
Sbjct: 380 HLGLAINLI 388


>gi|50289935|ref|XP_447399.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74661253|sp|Q6FQU5.1|DHH1_CANGA RecName: Full=ATP-dependent RNA helicase DHH1
 gi|49526709|emb|CAG60336.1| unnamed protein product [Candida glabrata]
          Length = 507

 Score =  201 bits (511), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 130/388 (33%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 21  QTDDVLNTKGNSFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGT 79

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K IK  + + Q +I+ PTRE+A+Q + V+R++G H   +      GGT
Sbjct: 80  GKTAAFVIPTLEK-IKPKLNKIQALIMVPTRELALQTSQVIRTLGRHC-GVSCMVTTGGT 137

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V ++VG+PGR+  +   K  ++    LF+MDEADK+++  F   I  +
Sbjct: 138 NLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKTIIEQV 197

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
            + LP   Q L+ SAT+       + K++  P  I   E+ T  L G+ Q  A       
Sbjct: 198 LTFLPKAHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEELT--LKGITQYYA------- 248

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 249 ----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 304

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 305 QDRNKVFHDFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 364

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 365 LGLAINLINWNDRFNLYKIEQELGTEIA 392


>gi|262396820|ref|YP_003288673.1| cold-shock DEAD-box protein A [Vibrio sp. Ex25]
 gi|262340414|gb|ACY54208.1| cold-shock DEAD-box protein A [Vibrio sp. Ex25]
          Length = 644

 Score =  201 bits (511), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 115/355 (32%), Positives = 200/355 (56%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNK 
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNK- 67

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K   Q
Sbjct: 68  IDLNQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKSGAQ 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           ++VG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VIVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ +P+++        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKKIVERFLREPVMVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|323355798|gb|EGA87612.1| Fal1p [Saccharomyces cerevisiae VL3]
          Length = 372

 Score =  201 bits (511), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 126/377 (33%), Positives = 204/377 (54%), Gaps = 28/377 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L + I L  +  Q 
Sbjct: 9   RGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL-QAIDLRKKDLQA 67

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE-----RPKRPVQIVVGSPGRI 148
           +IL+PTRE+A QI  VV+++G ++ N++     GG  ++       K   Q V G+PGR+
Sbjct: 68  LILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 126

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L   +V++ ++DEAD+L++   GF + I  I+++LP   Q++VVSAT + D 
Sbjct: 127 LDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDI 186

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K+M DP+ I  +     L G+KQ V             VD+E+     L  +   
Sbjct: 187 LEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKEEWKFDTLCDIYDS 235

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + + + L  +NF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 236 LTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLIST 295

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++   L K      
Sbjct: 296 DVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLR---- 351

Query: 383 EINLDHAFNVGLVPDNL 399
           EI   ++  +  +P N 
Sbjct: 352 EIEKFYSIKINPMPANF 368


>gi|3097266|emb|CAA76677.1| translation initiation factor [Pisum sativum]
          Length = 407

 Score =  201 bits (511), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 126/414 (30%), Positives = 221/414 (53%), Gaps = 36/414 (8%)

Query: 10  RTKDVLSNIDVLFEND-----------VLIEKPIRQGLQENGFVKESPIQMAAFPYVLNG 58
           R + V+SN D+ FE             + I++ + +G+   GF K S IQ  A   ++ G
Sbjct: 11  RGRTVISNEDMDFETTEGVKAIATFEGMGIKEDLLRGIYAYGFEKPSAIQQRAVAPIIQG 70

Query: 59  YDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVK 118
            D I Q++SGTGK+ + +   + +++   V++ Q +I++PTRE+A Q   V+ ++G H+ 
Sbjct: 71  RDVIAQAQSGTGKTSM-IALTVCQVVDTSVREVQALIVSPTRELATQTEKVILAIGDHI- 128

Query: 119 NLHVDYFIGGTQVERPKRP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI 174
           N+     IGG  V    R     V +V G+PGR+  MIK + L   +++L ++DE+D+++
Sbjct: 129 NIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEML 188

Query: 175 NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ 234
           + GF + I  +Y  LPP  Q+ ++S T  H+ L    K+M DP+ I  +     L G+KQ
Sbjct: 189 SRGFKDQIYDVYRYLPPDLQVCLISRTLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQ 248

Query: 235 LVALIPECKNPSLRYVDEEKKL----VQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
               + +          E+ K     V  +  +P  + +   N + + + + E + N NF
Sbjct: 249 FFVAVEK----------EDWKFDTLCVIFMILSPSLKLLYSVNTKRKVDWLTEKMRNNNF 298

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
               + G   QK R A +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+
Sbjct: 299 TVSSMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI 358

Query: 351 HRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQI 404
           HR+GR+GR+G +G+ I  V ++ +     ++ +I   ++  +  +P N+ GD I
Sbjct: 359 HRIGRSGRFGRKGVAINFVKSDDI----KILRDIEQYYSTQIDEMPMNI-GDLI 407


>gi|409191772|gb|AFV30230.1| ATP-dependent RNA helicase [Medicago sativa]
          Length = 427

 Score =  201 bits (511), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 193/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D + Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQID 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            +P  Q   +IL  TRE+A QI         ++ +L V  F GG  ++  K  ++     
Sbjct: 110 PVP-GQVSALILCHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVHKDLLKNECPH 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ +VR FI+DE DK++ +    +D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLL--GVKQLVALIPECKNPSLRYVDEEKKL 256
           SAT S +     +K+M DP+ I  +D  +  L   V+  + L  E KN         +KL
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKN---------RKL 279

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  
Sbjct: 280 YDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHT 339

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS  S
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSS 396


>gi|449275224|gb|EMC84147.1| Eukaryotic initiation factor 4A-III, partial [Columba livia]
          Length = 335

 Score =  201 bits (511), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 110/319 (34%), Positives = 181/319 (56%), Gaps = 19/319 (5%)

Query: 63  VQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHV 122
           ++S+SGTGK+  F ++ L + + + V++ Q +ILAPTRE+AVQI   + ++G ++ N+  
Sbjct: 9   LRSQSGTGKTATFSISVL-QCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM-NVQC 66

Query: 123 DYFIGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF 178
              IGGT V    R +     +V G+PGR+  MI+ + L   ++++ ++DEAD+++N GF
Sbjct: 67  HACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGF 126

Query: 179 VEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVAL 238
            E I  +Y  LPP  Q++++SAT  H+ L    K+M DP+ I  +     L G+KQ    
Sbjct: 127 KEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVA 186

Query: 239 IPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
           +            EE K   L  L       Q VIF N + + + + E +  ANF    +
Sbjct: 187 VER----------EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSM 236

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
            G   QK R + +  F+ G  R+L++TD+ ARG+D   V L+IN ++P++   Y+HR+GR
Sbjct: 237 HGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGR 296

Query: 356 AGRYGTRGLVITIVSAESL 374
           +GRYG +G+ I  V  + +
Sbjct: 297 SGRYGRKGVAINFVKNDDI 315


>gi|297847848|ref|XP_002891805.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337647|gb|EFH68064.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 412

 Score =  201 bits (511), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 130/382 (34%), Positives = 199/382 (52%), Gaps = 34/382 (8%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYD 60
           +  +VL   D  F + D + E     GLQEN        GF K S IQ         G D
Sbjct: 19  KLNEVLEGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G + + +
Sbjct: 79  VIQQAQSGTGKTATFCSGVLQQL-DYTLVQCQALVLAPTRELAQQIEKVMRALGDY-QGV 136

Query: 121 HVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R +Q    +VVG+PGR+  M++ + L  D +++F++DEAD++++ 
Sbjct: 137 KVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSR 196

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQF- 255

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 256 ------------YVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 303

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 304 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYL 363

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  ++ +
Sbjct: 364 HRIGRSGRFGRKGVAINFITRD 385


>gi|297830638|ref|XP_002883201.1| hypothetical protein ARALYDRAFT_479492 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329041|gb|EFH59460.1| hypothetical protein ARALYDRAFT_479492 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 408

 Score =  201 bits (511), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 200/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           ND+ I++ + +G+ E GF K S IQ  A   +L G D I Q++SGTGK+   +  ++ ++
Sbjct: 38  NDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKT-SMIALSVCQV 96

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQ 139
           +    ++ Q +IL+PTRE+A Q    ++++G H  N+     IGG  V    R     V 
Sbjct: 97  VDTSSREVQALILSPTRELATQTEKTIQAIGLH-ANIQAHACIGGKSVGEDIRKLEHGVH 155

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MIK + L   +++L I+DE+D++++ GF + I  +Y  LPP  Q+ +VS
Sbjct: 156 VVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVS 215

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  H+ L    K+M +P+ I  +     L G+KQ    + +          EE K   L
Sbjct: 216 ATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEK----------EEWKFDTL 265

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E + + NF    + G   QK R   ++ F+ G+ 
Sbjct: 266 CDLYDTLTITQAVIFCNTKRKVDYLSEKMRSNNFTVSSMHGDMPQKERDEIMNQFRSGES 325

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 326 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 383


>gi|170759986|ref|YP_001785987.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406975|gb|ACA55386.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 425

 Score =  201 bits (511), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 203/375 (54%), Gaps = 19/375 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGRDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--LPVQQPQTI---ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           L  L K     + P+TI   +LAPTRE+A+QI +     G ++ NL      GG     Q
Sbjct: 60  LQNLSKDKKVNKDPRTIRALVLAPTRELAIQIGESFECYGKYI-NLKSAVIFGGVSQNPQ 118

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S+LP
Sbjct: 119 TKALREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
             +Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  +L   
Sbjct: 179 KARQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRAL--- 235

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +L++
Sbjct: 236 -----LKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNN 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+   
Sbjct: 291 FKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDIPETYVHRIGRTGRAGAKGVAISFCD 350

Query: 371 AESLVKFHSLMGEIN 385
            E      ++   IN
Sbjct: 351 IEETKSLKAIEKLIN 365


>gi|225464928|ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Vitis vinifera]
          Length = 412

 Score =  201 bits (511), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 193/354 (54%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+ + +   + +++   
Sbjct: 46  IKDDLLRGIYAYGFEKPSAIQQRAVLPIIQGRDVIAQAQSGTGKTSM-IALTVCQMVDTS 104

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G  + N+     IGG  V    R     V IV G
Sbjct: 105 NREVQALILSPTRELASQTEKVILAIGDFI-NIQAHACIGGKSVGEDIRKLEYGVHIVSG 163

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++L ++DE+D++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 164 TPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 223

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 224 NEILEITNKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 273

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + + NF    + G   QK R A +  F+ G  R+L+
Sbjct: 274 DTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERDAIMAEFRSGTTRVLI 333

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 334 TTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKTDDI 387


>gi|402080882|gb|EJT76027.1| ATP-dependent RNA helicase DHH1 [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 539

 Score =  201 bits (511), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/367 (36%), Positives = 198/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 37  QTEDVTNTKGLEFE-DFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FVV AL K I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 96  GKTAAFVVPALEK-INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGT 153

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 154 TLRDDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSVEFTPVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K M+DP  I   D    L G+ Q  A        
Sbjct: 214 LQFHPKDRQVMLFSATFPISVKDFSDKNMMDPYEINLMDELT-LRGITQYYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 265 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQ 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 322 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 381

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 382 GLAINLI 388


>gi|359429519|ref|ZP_09220543.1| putative helicase [Acinetobacter sp. NBRC 100985]
 gi|358234980|dbj|GAB02082.1| putative helicase [Acinetobacter sp. NBRC 100985]
          Length = 383

 Score =  201 bits (511), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 115/354 (32%), Positives = 201/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQ-- 89
           +++ +   GF K +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PVQ  
Sbjct: 14  LKKAIDALGFTKMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPVQDQ 73

Query: 90  ----QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
               +P+ +ILAPTRE+A+QI    +++     +LH+   +GG   ++ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAKAL-TKFSDLHLVTLLGGVDFDKQKKMLDRNFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 133 IVATPGRLIDFVEQKEVWLDRIEFLVIDEADRLLDMGFIPSVKRIVRYSPFKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ E K       D+ K L +
Sbjct: 193 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVV-ENK-------DKYKLLQE 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L   P ++ +IF+N + +   + ++L    +    LSG   Q  RL  LD FK+GK  I
Sbjct: 245 ILKDEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQGKNNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  VIN  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|392575855|gb|EIW68987.1| hypothetical protein TREMEDRAFT_44243 [Tremella mesenterica DSM
           1558]
          Length = 552

 Score =  201 bits (510), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 197/370 (53%), Gaps = 21/370 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FEN  L  + +  G+   GF   SPIQ  + P  L+G D + ++K+GT
Sbjct: 26  QTEDVLATEGSTFENFGL-RRELLMGIFTAGFENPSPIQEQSIPLALSGRDILARAKNGT 84

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  LN+ I       Q ++L PTRE+A+Q + V +++GAH+ NL V    GGT
Sbjct: 85  GKTASFIIPTLNR-INTKANHIQAVLLVPTRELALQTSQVCKTLGAHIPNLQVMVTTGGT 143

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV I+VG+PGR+  +      N+    +F+MDEADKL++  F   I  +
Sbjct: 144 TLRDDILRLQEPVHILVGTPGRVLDLGGKGIANLKQCGIFVMDEADKLLSEEFTPVIEQL 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            +  P  +Q+++ SAT+  +      ++M+ P  I   D    L GV Q  A        
Sbjct: 204 LALCPSERQLMLFSATFPWNVKHFSDRHMIQPHEINLMDELT-LKGVTQFYA-------- 254

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              YV+E +K   L  L S+   NQ +IF N   R E++ + + +  +   Y      Q 
Sbjct: 255 ---YVEERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITDLGYSCFYSHARMLQA 311

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV +DL  RGID   V++VIN + P  A +YLHR+GR+GR+G  
Sbjct: 312 HRNRVFHDFRAGMTRNLVCSDLLTRGIDIQAVNVVINFDFPKTAESYLHRIGRSGRFGHL 371

Query: 363 GLVITIVSAE 372
           GL I++++ E
Sbjct: 372 GLAISLLTLE 381


>gi|359778006|ref|ZP_09281280.1| ATP-dependent RNA helicase DeaD [Arthrobacter globiformis NBRC
           12137]
 gi|359304860|dbj|GAB15109.1| ATP-dependent RNA helicase DeaD [Arthrobacter globiformis NBRC
           12137]
          Length = 697

 Score =  201 bits (510), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 194/358 (54%), Gaps = 21/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
            D+ I+  +   LQ+ G+ K SPIQ A  P +L G D +  +++GTGK+  F V AL++L
Sbjct: 56  TDLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSRL 115

Query: 84  IKL-----PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERP 134
            +L     P ++ Q ++LAPTRE+A+Q+ +   S   H+ +  V    GG+    Q+   
Sbjct: 116 AELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLPVYGGSAYGPQLAGL 175

Query: 135 KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
           +R  Q+VVG+PGR+   I    L++  ++  ++DEAD+++  GF ED+  I+ Q P  +Q
Sbjct: 176 RRGAQVVVGTPGRVIDHIAKGSLDLSELQYLVLDEADEMLRMGFAEDVEQIFQQTPESRQ 235

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ--LVALIPECKNPSLRYVDE 252
           + + SAT         ++Y+ +P  I  +  T     +KQ  L  + P   +   R ++ 
Sbjct: 236 VALFSATMPSQIRRMSKQYLNNPAEISVKSKTSTGTNIKQRYLQVMGPHKLDAMTRILEV 295

Query: 253 EKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
           E+          F+  + F   ++  E + + L +  F A  ++G   Q+ R  ++D+ K
Sbjct: 296 EE----------FDGVIAFVRTKMATEDLADKLKSRGFQAAAINGDIPQQQRERTVDALK 345

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            G++ ILV TD+AARG+D   +  V+N +IPHD  +Y+HR+GR GR G  G  I  ++
Sbjct: 346 EGRIDILVATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRAGDAILFMT 403


>gi|359690200|ref|ZP_09260201.1| ATP-dependent RNA helicase [Leptospira licerasiae serovar Varillal
           str. MMD0835]
 gi|418751003|ref|ZP_13307289.1| DEAD/DEAH box helicase [Leptospira licerasiae str. MMD4847]
 gi|418758776|ref|ZP_13314958.1| DEAD/DEAH box helicase family / helicase C-terminal domain
           multi-domain protein [Leptospira licerasiae serovar
           Varillal str. VAR 010]
 gi|384114678|gb|EIE00941.1| DEAD/DEAH box helicase family / helicase C-terminal domain
           multi-domain protein [Leptospira licerasiae serovar
           Varillal str. VAR 010]
 gi|404273606|gb|EJZ40926.1| DEAD/DEAH box helicase [Leptospira licerasiae str. MMD4847]
          Length = 512

 Score =  201 bits (510), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 202/366 (55%), Gaps = 23/366 (6%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPT 99
           GF + S IQ  + P +L+G D I  S++GTGK+  F + +L ++++   Q PQ ++L PT
Sbjct: 24  GFTEPSSIQSESIPLILSGRDVIGHSRTGTGKTAAFAIPSL-EILEEGEQSPQVLVLCPT 82

Query: 100 REIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVGSPGRIKQMIKLK 155
           RE+ VQ+ +  R +G + ++  V    GG     Q +  KR  Q++VG+PGR    +  K
Sbjct: 83  RELVVQVAEEFRKLGKYKEDFQVAAIYGGDDITKQFKALKRKPQVIVGTPGRTMDHMDRK 142

Query: 156 YLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMV 215
            L +  +++ I+DEAD++++ GF+ED+  I +++P  +Q ++ SAT S   +   +K+  
Sbjct: 143 TLVLSGIKMVILDEADEMLDMGFLEDMEIILAKVPEERQTILFSATLSAKVMGITKKFQN 202

Query: 216 DPLLIRPE--DATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSN 273
            P ++      A RP   ++Q+   + E   P        + L++LL        ++F N
Sbjct: 203 SPKIVDVTGGKADRP--KIRQIYFEMREGLKP--------EALIRLLEFHTPKASLVFCN 252

Query: 274 YQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAAN 333
            ++R + + E L +    +E L G   Q  R   +  F+ G V +LV TD+A RGID ++
Sbjct: 253 TKVRVDELVEFLKSKGIFSEGLHGDLSQNQRNKVMSGFRSGLVTVLVATDVAGRGIDVSD 312

Query: 334 VDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINLDHAF--N 391
           V+ V N +IP D+  Y+HR+GR GR G +GL ++ VS     +F +L  +I  DH F   
Sbjct: 313 VEAVFNYDIPRDSEDYVHRIGRTGRAGRKGLALSFVSNR---EFKTLR-KIKEDHEFEME 368

Query: 392 VGLVPD 397
           +G VPD
Sbjct: 369 LGKVPD 374


>gi|120600329|ref|YP_964903.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
 gi|146291742|ref|YP_001182166.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
 gi|120560422|gb|ABM26349.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
 gi|145563432|gb|ABP74367.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
           CN-32]
          Length = 640

 Score =  201 bits (510), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 193/358 (53%), Gaps = 24/358 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + + L E G+ K +PIQ A+   ++ G D + Q+++GTGK+  F +  LNK+       P
Sbjct: 17  LLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVTSQ--TTP 74

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+AVQ+ +   S    +KN HV    GG     Q+   KR  Q++VG+PGR
Sbjct: 75  QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQVIVGTPGR 134

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   L +DS++  ++DEAD+++  GF++DI WI    P  +Q+ + SAT      
Sbjct: 135 VMDHMRRGTLKLDSLKALVLDEADEMLKMGFIDDIEWILEHTPSERQLALFSATMPEQIK 194

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV-----DEEKKLVQLLSQ 262
               +++  P+ +R E +   +  ++Q             R+V     ++ + LV++L  
Sbjct: 195 RVANQHLRSPVHVRIESSQTTVESIEQ-------------RFVQVSQHNKLEALVRVLEV 241

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
                 +IF   +     + E L    + +  L G  +Q+AR  ++D  KRGK+ IL+ T
Sbjct: 242 ENTEGVIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDILIAT 301

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           D+AARG+D   +  V+N +IP+DA  Y+HR+GR GR G  G+ I  V++  +    ++
Sbjct: 302 DVAARGLDVERIGHVVNYDIPYDAEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTI 359


>gi|163800381|ref|ZP_02194282.1| hypothetical protein 1103602000595_AND4_06859 [Vibrio sp. AND4]
 gi|159175824|gb|EDP60618.1| hypothetical protein AND4_06859 [Vibrio sp. AND4]
          Length = 619

 Score =  201 bits (510), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 114/354 (32%), Positives = 198/354 (55%), Gaps = 13/354 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL 
Sbjct: 10  DLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL- 68

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
            L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    +
Sbjct: 69  DLDQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKNGAHV 128

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +VG+PGR++ +I  + L++D V+ F++DEAD+++N GFV+D+T I    P   Q ++ SA
Sbjct: 129 IVGTPGRVQDLINRERLHLDEVKTFVLDEADEMLNMGFVDDVTAIMEHSPDSAQRVLFSA 188

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T      +  ++++  P+ +        +  V+Q   ++        + V++++ + +LL
Sbjct: 189 TMPPMLKSICERFLRSPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRLL 240

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + ILV
Sbjct: 241 ETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKKGVIDILV 300

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
            TD+ ARG+D   ++ V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 301 ATDVVARGLDVPRINHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|60594465|pdb|1XTK|A Chain A, Structure Of Decd To Dead Mutation Of Human Uap56
          Length = 390

 Score =  201 bits (510), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 128/383 (33%), Positives = 205/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 11  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 69

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 70  -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 128

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DEADK++       D+  I+   P  KQ+++
Sbjct: 129 HIVVGTPGRILALARNKSLNLKHIKHFILDEADKMLEQLDMRRDVQEIFRMTPHEKQVMM 188

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 189 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 240

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 241 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 300

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 301 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 360

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 361 ---ILNDVQDRFEVNISELPDEI 380


>gi|322706990|gb|EFY98569.1| DEAD-box helicases & Helicase superfamily domain-containing protein
           [Metarhizium anisopliae ARSEF 23]
          Length = 397

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 212/386 (54%), Gaps = 29/386 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 27  DDMSLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 86  IDPTVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVRDDMKALQDGPQ 144

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  D++++F++DEAD++++ GF + I  I+  LP   Q++++S
Sbjct: 145 VVVGTPGRVHDMIQRRFLKTDAMKMFVLDEADEMLSRGFTDQIYDIFQLLPQSTQVVLLS 204

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---- 255
           AT   D L    ++M DP+ I  +     L G+KQ              Y+  EK+    
Sbjct: 205 ATMPQDVLEVTTRFMRDPVRILVKKDELTLEGIKQF-------------YIAVEKEEWKL 251

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + + + E L   +F    + G  DQ  R   +  F+ 
Sbjct: 252 DTLSDLYETVTITQAVIFCNTRRKVDWLTEKLTARDFTVSAMHGDMDQAQRDLIMKEFRS 311

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE 
Sbjct: 312 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAED 371

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNL 399
           +     +M EI   ++  +  +P N+
Sbjct: 372 V----RMMREIEQFYSTQIEEMPMNV 393


>gi|302915819|ref|XP_003051720.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732659|gb|EEU46007.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 397

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 211/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 27  DDMNLKSELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+  Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 86  IDTNVKACQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVREDMKALQDGPQ 144

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  DS+++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 145 VVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 204

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 205 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 254

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 255 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSS 314

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +  
Sbjct: 315 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDV-- 372

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 373 --RMMREIEQFYSTQIEEMPMNV 393


>gi|227875859|ref|ZP_03993985.1| ATP-dependent RNA helicase [Mobiluncus mulieris ATCC 35243]
 gi|269977494|ref|ZP_06184466.1| ATP-dependent RNA helicase DeaD [Mobiluncus mulieris 28-1]
 gi|307700011|ref|ZP_07637060.1| putative DEAD-box ATP-dependent RNA helicase CshA [Mobiluncus
           mulieris FB024-16]
 gi|227843607|gb|EEJ53790.1| ATP-dependent RNA helicase [Mobiluncus mulieris ATCC 35243]
 gi|269934410|gb|EEZ90972.1| ATP-dependent RNA helicase DeaD [Mobiluncus mulieris 28-1]
 gi|307614772|gb|EFN93992.1| putative DEAD-box ATP-dependent RNA helicase CshA [Mobiluncus
           mulieris FB024-16]
          Length = 523

 Score =  201 bits (510), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 209/398 (52%), Gaps = 32/398 (8%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           D+ +N D  F +D  +E  I   L + G +   PIQ    P  +  +D I Q+K+GTGK+
Sbjct: 25  DLNANQDKTF-SDFGVEPEIVAALADKGIIHPFPIQALTLPVAIERHDIIGQAKTGTGKT 83

Query: 73  IVFVVAALNKLI--------KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVD 123
           + F +  L+ +I        +LP    PQ ++L PTRE+A Q+   +R+  +H +   + 
Sbjct: 84  LGFAIPILHDIIGPGDEGWDELPSPGAPQALVLLPTRELAKQVAAEIRAAASH-RVARIL 142

Query: 124 YFIGG----TQVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFV 179
              GG    +Q++  K  V++VVG+PGR+  ++K   L +  VR  ++DEAD++++ GF+
Sbjct: 143 EIYGGVGFDSQIQSLKDGVEVVVGTPGRLIDLMKHGELQLKEVRTLVLDEADEMLDMGFL 202

Query: 180 EDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR---PEDATRPLLGVKQLV 236
            D+  + +  PP +  ++ SAT     +A  ++YM  P  IR   P D ++ +  V Q  
Sbjct: 203 PDVEVLIAATPPERHTMLFSATMPGPVVALARRYMYQPTHIRAADPSDDSKTVRQVHQFA 262

Query: 237 ALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
                     +  +++E+ + ++L        +IF+  +   + + + L N  F A  + 
Sbjct: 263 Y--------RVHSMNKEEVVARILQAKNRGLTIIFTRTKRSCQRLADELTNRGFAAGAIH 314

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  +Q AR  +L +F+ GKV +LV TD+AARGID  +V  VIN E P D  TY+HR+GR 
Sbjct: 315 GDLNQSARERALRAFRHGKVDVLVATDVAARGIDVDDVTHVINFECPEDEKTYIHRIGRT 374

Query: 357 GRYGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGL 394
            R G  G  +T V  ES+ ++        ++ A  +GL
Sbjct: 375 ARAGHSGTAVTFVDWESVTRWRV------INRALELGL 406


>gi|168178014|ref|ZP_02612678.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum NCTC 2916]
 gi|182671239|gb|EDT83213.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum NCTC 2916]
          Length = 425

 Score =  201 bits (510), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 203/378 (53%), Gaps = 25/378 (6%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--------LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT-- 129
           L  L K         P++    ++LAPTRE+A+QI +     G ++ NL      GG   
Sbjct: 60  LQNLSKDKKANKNPKPIR---ALVLAPTRELAIQIGESFECYGKYI-NLKSAVIFGGVSQ 115

Query: 130 --QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYS 187
             Q +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S
Sbjct: 116 NPQTKVLREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIIS 175

Query: 188 QLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSL 247
           +LP ++Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  SL
Sbjct: 176 KLPKIRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSL 235

Query: 248 RYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLAS 307
                   L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +
Sbjct: 236 --------LKHLLRDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRA 287

Query: 308 LDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVIT 367
           L++FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+
Sbjct: 288 LNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAIS 347

Query: 368 IVSAESLVKFHSLMGEIN 385
               E      ++   IN
Sbjct: 348 FCDIEETKSLKAIEKLIN 365


>gi|115688648|ref|XP_001178866.1| PREDICTED: spliceosome RNA helicase DDX39B-like [Strongylocentrotus
           purpuratus]
          Length = 429

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 128/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 51  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLD 110

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI         ++  + V  F GG  +++ ++ ++    
Sbjct: 111 --PVDGQVSVLVMCHTRELAFQIAKEYERFSKYMPTVKVGVFFGGLSIKKDEQTIKTNCP 168

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGR   + + K LN+  V+ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 169 HIVVGTPGRTLALGRQKILNLKHVKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 228

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ +  +D T+  L G++Q            L+  ++ +KL
Sbjct: 229 FSATLSKEVRPVCKKFMQDPMEVYVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 280

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   +C+ L   NF A  +  A  Q  RLA   +FK  + 
Sbjct: 281 FDLLDVLEFNQVVIFVKSVQRCIALCQLLVEQNFPAIGIHRAMQQDERLARYQAFKTFQK 340

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL +T VS E   K
Sbjct: 341 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEEDAK 400

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
               + ++      N+G +P+ +
Sbjct: 401 ---TLNDVQDRFEVNIGELPEEI 420


>gi|402083584|gb|EJT78602.1| ATP-dependent RNA helicase eIF4A [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 397

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 133/376 (35%), Positives = 207/376 (55%), Gaps = 29/376 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K I   V+Q Q 
Sbjct: 37  RGIYAYGFERPSAIQQRAIIPVIKGHDVIAQAQSGTGKTATFSISVLQK-IDQNVKQCQA 95

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGRIK 149
           +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    +VVG+PGR++
Sbjct: 96  LILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVQ 154

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MI+ ++L  D++++F++DEAD++++ GF E I  I+  LP   Q++++SAT   D L  
Sbjct: 155 DMIQRRFLKTDAMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEV 214

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLLSQT 263
             K+M DP+ I  +     L G+KQ              Y+  EK+      L  L    
Sbjct: 215 TTKFMRDPVRILVKKDELTLEGIKQF-------------YIAVEKEEWKLDTLSDLYETV 261

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  R+L+ TD
Sbjct: 262 TITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATD 321

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGE 383
           L ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +     +M E
Sbjct: 322 LLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDV----RMMRE 377

Query: 384 INLDHAFNVGLVPDNL 399
           I   ++  +  +P N+
Sbjct: 378 IEQFYSTQIEEMPMNV 393


>gi|357454563|ref|XP_003597562.1| Eukaryotic initiation factor 4A [Medicago truncatula]
 gi|355486610|gb|AES67813.1| Eukaryotic initiation factor 4A [Medicago truncatula]
          Length = 413

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 124/356 (34%), Positives = 191/356 (53%), Gaps = 26/356 (7%)

Query: 27  LIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKL 86
           L+E  +R G+   GF K S IQ       + G D I Q++SGTGK+  F    L +L   
Sbjct: 47  LLENLLR-GIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQL-DY 104

Query: 87  PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVV 142
            + Q Q ++LAPTRE+A QI  V+R++G ++  + V   +GGT V   +R +Q    +VV
Sbjct: 105 GLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQTGVHVVV 163

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+  M++ + L  D +++F++DEAD++++ GF + I  I+  LPP  Q+ V SAT 
Sbjct: 164 GTPGRVFDMLRRQSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATM 223

Query: 203 SHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------L 256
             + L   +K+M  P+ I  +     L G+KQ              YV+ +K+      L
Sbjct: 224 PPEALEITRKFMNKPVRILVKRDELTLEGIKQF-------------YVNVDKEEWKLETL 270

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + +   +       G  DQ  R   +  F+ G  
Sbjct: 271 CDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSS 330

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ E
Sbjct: 331 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLE 386


>gi|322701035|gb|EFY92786.1| cell cycle control protein [Metarhizium acridum CQMa 102]
          Length = 397

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 212/386 (54%), Gaps = 29/386 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 27  DDMSLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 86  IDPTVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVRDDMKALQDGPQ 144

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  D++++F++DEAD++++ GF + I  I+  LP   Q++++S
Sbjct: 145 VVVGTPGRVHDMIQRRFLKTDAMKMFVLDEADEMLSRGFTDQIYDIFQLLPQSTQVVLLS 204

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---- 255
           AT   D L    ++M DP+ I  +     L G+KQ              Y+  EK+    
Sbjct: 205 ATMPQDVLEVTTRFMRDPVRILVKKDELTLEGIKQF-------------YIAVEKEEWKL 251

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + + + E L   +F    + G  DQ  R   +  F+ 
Sbjct: 252 DTLSDLYETVTITQAVIFCNTRRKVDWLTEKLTARDFTVSAMHGDMDQTQRDLIMKEFRS 311

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE 
Sbjct: 312 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAED 371

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNL 399
           +     +M EI   ++  +  +P N+
Sbjct: 372 V----RMMREIEQFYSTQIEEMPMNV 393


>gi|407929486|gb|EKG22315.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
           phaseolina MS6]
          Length = 396

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 136/386 (35%), Positives = 211/386 (54%), Gaps = 30/386 (7%)

Query: 25  DVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           D +  KP + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L KL
Sbjct: 26  DAMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKL 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQ 139
               V++ Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    +     VQ
Sbjct: 86  -DPNVKECQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVREDMKALQSGVQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ + L  D++++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVHDMIQRRVLKTDAMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---- 255
           AT   D L    K+M DP+ I  + A   L G+KQ              Y+  EK+    
Sbjct: 204 ATMPQDVLEVTTKFMRDPVRILVKKAELTLEGIKQF-------------YIAVEKEDWKL 250

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ 
Sbjct: 251 DTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDVIMKEFRS 310

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ 
Sbjct: 311 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADD 370

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNL 399
           +     +M EI   ++  +  +P N+
Sbjct: 371 V----RMMREIEQFYSTQIEEMPMNV 392


>gi|356507736|ref|XP_003522620.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine
           max]
          Length = 427

 Score =  201 bits (510), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/357 (36%), Positives = 193/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQID 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            +P  Q   ++L  TRE+A QI         ++ +L V  F GG  ++  K  ++     
Sbjct: 110 PVP-GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPH 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ +VR FI+DE DK++ +    +D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLG--VKQLVALIPECKNPSLRYVDEEKKL 256
           SAT S +     +K+M DP+ I  +D  +  L   V+  + L  E KN         +KL
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKN---------RKL 279

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHT 339

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS  +
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCST 396


>gi|356515448|ref|XP_003526412.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform 1
           [Glycine max]
 gi|356515450|ref|XP_003526413.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform 2
           [Glycine max]
          Length = 427

 Score =  201 bits (510), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/357 (36%), Positives = 193/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQID 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            +P  Q   ++L  TRE+A QI         ++ +L V  F GG  ++  K  ++     
Sbjct: 110 PVP-GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPH 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ +VR FI+DE DK++ +    +D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLG--VKQLVALIPECKNPSLRYVDEEKKL 256
           SAT S +     +K+M DP+ I  +D  +  L   V+  + L  E KN         +KL
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKN---------RKL 279

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHT 339

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS  +
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCST 396


>gi|424834031|ref|ZP_18258749.1| ATP-dependent RNA helicase RhlE [Clostridium sporogenes PA 3679]
 gi|365979266|gb|EHN15331.1| ATP-dependent RNA helicase RhlE [Clostridium sporogenes PA 3679]
          Length = 425

 Score =  201 bits (510), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 200/362 (55%), Gaps = 19/362 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--LPVQQPQTI---ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           L  L K     + P+TI   +LAPTRE+A+QI +     G ++ NL      GG     Q
Sbjct: 60  LQNLSKDKKVNKNPRTIRALVLAPTRELAIQIGESFECYGKYI-NLKSAVIFGGVSQNPQ 118

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S+LP
Sbjct: 119 TKALREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
            ++Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  SL   
Sbjct: 179 KVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSL--- 235

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  LL     +  ++FS  +    +I ++L  A   AE + G + Q AR  +L++
Sbjct: 236 -----LKHLLKDESIDSALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNN 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           FK G +R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+   
Sbjct: 291 FKEGNIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCD 350

Query: 371 AE 372
            E
Sbjct: 351 IE 352


>gi|197123043|ref|YP_002134994.1| DEAD/DEAH box helicase [Anaeromyxobacter sp. K]
 gi|196172892|gb|ACG73865.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter sp. K]
          Length = 651

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 128/390 (32%), Positives = 210/390 (53%), Gaps = 16/390 (4%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + +P+R+ + E+G+ K +P+Q A F  + +G D IV+SK+GTGK+  F +  L + 
Sbjct: 23  DDMGLSEPVRRAVAEHGYTKPTPVQSATFRPIRDGKDVIVRSKTGTGKTAAFSIPILER- 81

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I    ++P  +++ PTRE+A+Q+ + V ++  H ++L V    GG     Q+++ K   +
Sbjct: 82  IPDGRRKPSALVMCPTRELAIQVAEEVTALAKH-RDLGVVTIYGGASMGDQLDKLKAGAE 140

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGRI   I+ K L ++ V +  +DEAD+++N GF E++T I   LP   Q L+ S
Sbjct: 141 IVVGTPGRIYDHIRRKTLRLEEVMVCCLDEADEMLNMGFFEEVTRILDHLPADVQQLLFS 200

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT   D    +  Y+ DP  I        L G +  V  I     P++    + + L+ +
Sbjct: 201 ATVPADIEQIIHDYLTDPETIL-------LSGDEYKVENINNVMYPTVDAYPKPRNLLYM 253

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           +        +IF N +    ++   L    + AE L+G   QK R   +   KRG+VR +
Sbjct: 254 IGMEEPEAAIIFCNTRSDTSLVTAVLNRNGYDAELLNGDLPQKERERVMAKVKRGEVRFM 313

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARGID +++  VIN  +P D A +LHR+GR GR G +G  +++VS   L    +
Sbjct: 314 VATDIAARGIDISDLSHVINYSLPEDPAVFLHRVGRTGRIGKKGTSLSLVSGGDLHTLTA 373

Query: 380 LMGEINLDHAFNVGLVPDNLTGDQINWTQR 409
           L  +  +   F    +P      +I WT R
Sbjct: 374 LQKKYEI--VFEKKALPTPEEARKI-WTDR 400


>gi|363752539|ref|XP_003646486.1| hypothetical protein Ecym_4646 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356890121|gb|AET39669.1| hypothetical protein Ecym_4646 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 490

 Score =  201 bits (510), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 196/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  A P  L   D + ++K+GT
Sbjct: 20  QTDDVLNTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPIALTRRDILARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L +++K  V + Q +I+ PTRE+A+Q + VVR++G H   L      GGT
Sbjct: 79  GKTAAFVIPTL-EIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GLSCMVTTGGT 136

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV ++VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 137 NLRDDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFIMDEADKMLSRDFKSLIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            S LP   Q L+ SAT+       + K++  P  I   D    L G+ Q  A        
Sbjct: 197 LSFLPSSHQSLLFSATFPLTVKEFMVKHLNKPYEINLMDELT-LKGITQYYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q+
Sbjct: 248 ---FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQ 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 365 GLAINLI 371


>gi|220917833|ref|YP_002493137.1| DEAD/DEAH box helicase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955687|gb|ACL66071.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 652

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 128/390 (32%), Positives = 210/390 (53%), Gaps = 16/390 (4%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + +P+R+ + E+G+ K +P+Q A F  + +G D IV+SK+GTGK+  F +  L + 
Sbjct: 23  DDMGLSEPVRRAVAEHGYTKPTPVQSATFRPIRDGKDVIVRSKTGTGKTAAFSIPILER- 81

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I    ++P  +++ PTRE+A+Q+ + V ++  H ++L V    GG     Q+++ K   +
Sbjct: 82  IPDGRRKPSALVMCPTRELAIQVAEEVTALAKH-RDLGVVTIYGGASMGDQLDKLKAGAE 140

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGRI   I+ K L ++ V +  +DEAD+++N GF E++T I   LP   Q L+ S
Sbjct: 141 IVVGTPGRIYDHIRRKTLRLEEVMVCCLDEADEMLNMGFFEEVTRILDHLPADVQQLLFS 200

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT   D    +  Y+ DP  I        L G +  V  I     P++    + + L+ +
Sbjct: 201 ATVPADIEQIIHDYLTDPETIL-------LSGDEYKVENINNVMYPTVDAYPKPRNLLYM 253

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           +        +IF N +    ++   L    + AE L+G   QK R   +   KRG+VR +
Sbjct: 254 IGMEEPEAAIIFCNTRSDTSLVTAVLNRNGYDAELLNGDLPQKERERVMAKVKRGEVRFM 313

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARGID +++  VIN  +P D A +LHR+GR GR G +G  +++VS   L    +
Sbjct: 314 VATDIAARGIDISDLSHVINYSLPEDPAVFLHRVGRTGRIGKKGTSLSLVSGGDLHTLTA 373

Query: 380 LMGEINLDHAFNVGLVPDNLTGDQINWTQR 409
           L  +  +   F    +P      +I WT R
Sbjct: 374 LQKKYEI--VFEKKALPTPEEARKI-WTDR 400


>gi|159117719|ref|XP_001709079.1| Translation initiation factor eIF-4A, putative [Giardia lamblia
           ATCC 50803]
 gi|157437194|gb|EDO81405.1| Translation initiation factor eIF-4A, putative [Giardia lamblia
           ATCC 50803]
          Length = 391

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 119/355 (33%), Positives = 201/355 (56%), Gaps = 13/355 (3%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
           G+   G+   S IQ  A   +++G D I Q++SGTGK+  F +  L + I + ++ PQ I
Sbjct: 34  GIFTYGYKIPSAIQSQAIVPIISGKDTIAQAQSGTGKTAAFTIGMLQR-IDIGLKSPQAI 92

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---IVVGSPGRIKQM 151
           IL+PTRE+A+Q   VV  +G+ +K + V   IGGTQV+      Q   ++V +PGR+  +
Sbjct: 93  ILSPTRELALQTLKVVDGIGSRLK-VQVAQCIGGTQVDDDIAAAQSCHLIVATPGRLLSL 151

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQ 211
           ++ KY+   +V++ ++DEAD++++ GF E I  I   +    Q+++VSAT   + L   +
Sbjct: 152 LQKKYVTTSNVKMVVLDEADEMLSRGFTEQIVSIMKFMNADIQIVLVSATLPPEILELTR 211

Query: 212 KYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIF 271
           ++M DP+ I  ++A   L G++Q V  + +     +  V++  K++ +       Q VIF
Sbjct: 212 QFMRDPVSILVKEAELTLDGIRQYVVELQDAWKTEV--VEDIYKVLSV------QQGVIF 263

Query: 272 SNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDA 331
            N   R + + E L +A      +    DQ  R   +  F+ G+ RIL+ T++ ARGID 
Sbjct: 264 CNSIGRVKELAEKLKSAGHTLSCIHSELDQAERNKIMGEFRSGQTRILIATNIIARGIDV 323

Query: 332 ANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINL 386
            NV LVIN +IP +  TYLHR+GR+GR+G +G+ I  V+ +      ++  + N+
Sbjct: 324 QNVSLVINYDIPREPETYLHRIGRSGRFGRKGVAINFVTDKDKQSMQAITDKFNV 378


>gi|160873699|ref|YP_001553015.1| DEAD/DEAH box helicase [Shewanella baltica OS195]
 gi|373951054|ref|ZP_09611015.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
 gi|378706943|ref|YP_005271837.1| DEAD/DEAH box helicase [Shewanella baltica OS678]
 gi|386323127|ref|YP_006019244.1| DEAD/DEAH box helicase [Shewanella baltica BA175]
 gi|418025621|ref|ZP_12664598.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
 gi|160859221|gb|ABX47755.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS195]
 gi|315265932|gb|ADT92785.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS678]
 gi|333817272|gb|AEG09938.1| DEAD/DEAH box helicase domain protein [Shewanella baltica BA175]
 gi|353534882|gb|EHC04447.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS625]
 gi|373887654|gb|EHQ16546.1| DEAD/DEAH box helicase domain protein [Shewanella baltica OS183]
          Length = 640

 Score =  201 bits (510), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 194/358 (54%), Gaps = 24/358 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + + L E G+ K +PIQ A+   ++ G D + Q+++GTGK+  F +  LNK+       P
Sbjct: 17  LLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVTSQ--TTP 74

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+AVQ+ +   S    +KN HV    GG     Q+   KR  Q++VG+PGR
Sbjct: 75  QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQVIVGTPGR 134

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   L +DS++  ++DEAD+++  GF++DI WI    P  +Q+ + SAT      
Sbjct: 135 VMDHMRRGTLKLDSLQALVLDEADEMLKMGFIDDIEWILEHTPSERQLALFSATMPEQIK 194

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV-----DEEKKLVQLLSQ 262
               +++ +P+ +R E +   +  ++Q             R+V     ++ + LV++L  
Sbjct: 195 RVANQHLRNPVHVRIESSQTTVESIEQ-------------RFVQVSQHNKLEALVRVLEV 241

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
                 +IF   +     + E L    + +  L G  +Q+AR  ++D  KRGK+ IL+ T
Sbjct: 242 ENTEGVIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDILIAT 301

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           D+AARG+D   +  V+N +IP+DA  Y+HR+GR GR G  G+ I  V++  +    ++
Sbjct: 302 DVAARGLDVERIGHVVNYDIPYDAEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTI 359


>gi|323338408|gb|EGA79633.1| Dhh1p [Saccharomyces cerevisiae Vin13]
          Length = 448

 Score =  201 bits (510), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 127/363 (34%), Positives = 191/363 (52%), Gaps = 23/363 (6%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
           G+ E GF K SPIQ  A P  + G D + ++K+GTGK+  FV+  L K +K  + + Q +
Sbjct: 2   GIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK-VKPKLNKIQAL 60

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE----RPKRPVQIVVGSPGRIKQ 150
           I+ PTRE+A+Q + VVR++G H   +      GGT +     R    V I+VG+PGR+  
Sbjct: 61  IMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLD 119

Query: 151 MIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATL 210
           +   K  ++    LFIMDEADK+++  F   I  I S LP   Q L+ SAT+       +
Sbjct: 120 LASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPXTHQSLLFSATFPLTVKEFM 179

Query: 211 QKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL---VQLLSQTPFN 266
            K++  P  I   E+ T  L G+ Q  A           +V+E +KL     L S+   N
Sbjct: 180 VKHLHKPYEINLMEELT--LKGITQYYA-----------FVEERQKLHCLNTLFSKLQIN 226

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q +IF N   R E++ + + +  +   Y      Q+ R      F++GKVR LV +DL  
Sbjct: 227 QAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLT 286

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINL 386
           RGID   V++VIN + P  A TYLHR+GR+GR+G  GL I +++       + +  E+  
Sbjct: 287 RGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGT 346

Query: 387 DHA 389
           + A
Sbjct: 347 EIA 349


>gi|148378643|ref|YP_001253184.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
           3502]
 gi|153933936|ref|YP_001383027.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
           19397]
 gi|153937665|ref|YP_001386574.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. Hall]
 gi|148288127|emb|CAL82195.1| putative ATP-dependent RNA helicase rhle [Clostridium botulinum A
           str. ATCC 3502]
 gi|152929980|gb|ABS35480.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. ATCC
           19397]
 gi|152933579|gb|ABS39078.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A str. Hall]
          Length = 425

 Score =  201 bits (510), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 203/375 (54%), Gaps = 19/375 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGRDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--LPVQQPQTI---ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           L  L K     + P+TI   +LAPTRE+A+QI +     G ++ NL      GG     Q
Sbjct: 60  LQNLSKDKKVNKNPRTIRALVLAPTRELAIQIGESFECYGKYI-NLKSAVIFGGVSQNPQ 118

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S+LP
Sbjct: 119 TKALREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
             +Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  +L   
Sbjct: 179 KARQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRAL--- 235

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +L++
Sbjct: 236 -----LKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNN 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+   
Sbjct: 291 FKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDIPETYVHRIGRTGRAGAKGVAISFCD 350

Query: 371 AESLVKFHSLMGEIN 385
            E      ++   IN
Sbjct: 351 IEETKSLKAIEKLIN 365


>gi|329956784|ref|ZP_08297353.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
 gi|328523823|gb|EGF50910.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
          Length = 372

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 113/353 (32%), Positives = 193/353 (54%), Gaps = 13/353 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I +PI + ++E G+   +PIQ+ A P  L G D +  +++GTGK+  F +  +  L 
Sbjct: 5   DLNITEPILKAIEEKGYTSPTPIQVKAIPAALTGKDILGCAQTGTGKTAAFAIPIIQHLQ 64

Query: 85  --KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQ 139
             K   +  + +IL PTRE+A+QI++ +     + +  H   F G     QV    + V 
Sbjct: 65  AGKERDKSIKALILTPTRELALQISECIDDYAKYTQVRHGVIFGGVNQRAQVNMLHKGVD 124

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           I+V +PGR+  ++   Y+ +DSVR F++DEAD++++ GF+ DI  +  +LP  KQ L  S
Sbjct: 125 ILVATPGRLLDLMNQGYIRLDSVRHFVLDEADRMLDMGFIHDIKRLLPKLPKEKQTLFFS 184

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +A     +  P+ I     +  +  ++Q V  + +         ++ K L+ +
Sbjct: 185 ATMPDTIIALTNSLLKQPVKIAITPKSSTVDTIEQTVYFVEK--------KEKSKLLISI 236

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L +      ++FS  +   + I   L+ A  G++ + G + Q AR ++L++FK GK+R++
Sbjct: 237 LHKAEGQSVLVFSRTKHNADRIVRVLSKAGIGSQAIHGNKSQNARQSALENFKTGKIRVM 296

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           + TD+AARGID   + LVIN ++P    TY+HR+GR GR G  G  +T  S E
Sbjct: 297 IATDIAARGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNSGTALTFCSQE 349


>gi|310790877|gb|EFQ26410.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
 gi|380486172|emb|CCF38874.1| ATP-dependent RNA helicase eIF4A [Colletotrichum higginsianum]
          Length = 396

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 211/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DDMNLKSELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+  Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 85  IDTNVKACQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALQDGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  DS+++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|375263387|ref|YP_005025617.1| cold-shock DEAD-box protein A [Vibrio sp. EJY3]
 gi|369843814|gb|AEX24642.1| cold-shock DEAD-box protein A [Vibrio sp. EJY3]
          Length = 639

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGVDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLNQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKKIVERFLRDPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|306819140|ref|ZP_07452854.1| ATP-dependent RNA helicase DeaD [Mobiluncus mulieris ATCC 35239]
 gi|304648116|gb|EFM45427.1| ATP-dependent RNA helicase DeaD [Mobiluncus mulieris ATCC 35239]
          Length = 523

 Score =  200 bits (509), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 209/398 (52%), Gaps = 32/398 (8%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           D+ +N D  F +D  +E  I   L + G +   PIQ    P  +  +D I Q+K+GTGK+
Sbjct: 25  DLNANQDKTF-SDFGVEPEIVAALADKGIIHPFPIQALTLPVAIERHDIIGQAKTGTGKT 83

Query: 73  IVFVVAALNKLI--------KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVD 123
           + F +  L+ +I        +LP    PQ ++L PTRE+A Q+   +R+  +H +   + 
Sbjct: 84  LGFAIPILHDIIGPGDEGWDELPSPGAPQALVLLPTRELAKQVAAEIRAAASH-RVARIL 142

Query: 124 YFIGG----TQVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFV 179
              GG    +Q++  K  V++VVG+PGR+  ++K   L +  VR  ++DEAD++++ GF+
Sbjct: 143 EIYGGVGFDSQIQSLKDGVEVVVGTPGRLIDLMKHGELQLKEVRTLVLDEADEMLDMGFL 202

Query: 180 EDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR---PEDATRPLLGVKQLV 236
            D+  + +  PP +  ++ SAT     +A  ++YM  P  IR   P D ++ +  V Q  
Sbjct: 203 PDVEVLIAATPPERHTMLFSATMPGPVVALARRYMYQPTHIRAADPSDDSKTVRQVHQFA 262

Query: 237 ALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
                     +  +++E+ + ++L        +IF+  +   + + + L N  F A  + 
Sbjct: 263 Y--------RVHSMNKEEVVARILQAKNRGLTIIFTRTKRSCQRLADELTNRGFAAGAIH 314

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  +Q AR  +L +F+ GKV +LV TD+AARGID  +V  VIN E P D  TY+HR+GR 
Sbjct: 315 GDLNQSARERALRAFRHGKVDVLVATDVAARGIDVDDVTHVINFECPEDEKTYIHRIGRT 374

Query: 357 GRYGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGL 394
            R G  G  +T V  ES+ ++        ++ A  +GL
Sbjct: 375 ARAGHSGTAVTFVDWESVTRWRV------INRALELGL 406


>gi|253574214|ref|ZP_04851556.1| DEAD/DEAH box helicase domain-containing protein, partial
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251846691|gb|EES74697.1| DEAD/DEAH box helicase domain-containing protein [Paenibacillus sp.
           oral taxon 786 str. D14]
          Length = 375

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 197/345 (57%), Gaps = 16/345 (4%)

Query: 36  LQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTII 95
           LQ  G V  +P+Q AA P + +G DAIVQ+++GTGK++ F++  L K I+    + Q +I
Sbjct: 18  LQGQGIVNPTPVQAAAIPVLQSGEDAIVQAQTGTGKTLAFLLPILEK-IRPERPEAQALI 76

Query: 96  LAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQM 151
           + PTRE+A+QIT   R +   ++ L V    GG  VER  R +    Q+V+G+PGR+   
Sbjct: 77  ITPTRELAIQITAEARKLAEAMEGLSVLAAYGGQDVERQLRKLKNGAQLVIGTPGRLLDH 136

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQ 211
           ++   L + +VR  ++DEAD++++ GF+ ++  I S +P  +Q ++ SAT   +     +
Sbjct: 137 LRRGSLTLGAVRYLVLDEADQMLHMGFLAEVEEILSLVPRSRQTMLFSATMPGNVKRLAK 196

Query: 212 KYMVDPLLIRPEDATRPLL-GVKQLVALIPECKNPSLRYVDEEKKLVQ-LLSQTPFNQCV 269
            YM  P  I+  + +R  L  ++Q++    EC + +     ++  L++ + SQ P+   V
Sbjct: 197 TYMDKPRDIQIAETSRVTLDSIRQILV---ECTDRT-----KQSALIESIRSQRPY-LAV 247

Query: 270 IFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGI 329
           IF   + R   + E L  A F ++ L G   Q  R   + +F+  K+ +LV TD+AARGI
Sbjct: 248 IFCRTKRRASTLNEALQAAGFQSDELHGDLSQAKREQVMRAFRSAKLELLVATDVAARGI 307

Query: 330 DAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           D   V  V N +IPHD  +Y+HR+GR GR G +G+ +T  + + +
Sbjct: 308 DVEGVTHVFNYDIPHDVDSYIHRIGRTGRAGEKGVAVTFAAPKDM 352


>gi|171681521|ref|XP_001905704.1| hypothetical protein [Podospora anserina S mat+]
 gi|170940719|emb|CAP65947.1| unnamed protein product [Podospora anserina S mat+]
          Length = 540

 Score =  200 bits (509), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 197/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 21  QTEDVTNTKGMEFE-DFGLKRSLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGT 79

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL K I   + + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 80  GKTAAFVIPALQK-INPKINKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGT 137

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +   +  ++    +FIMDEADKL++  F   I  +
Sbjct: 138 GLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSAEFTPVIEQL 197

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K M +P  I   D    L G+ Q  A        
Sbjct: 198 LQFHPKDRQVMLFSATFPISVKDFSDKNMKEPYEINLMDELT-LRGITQYYA-------- 248

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              YV+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 249 ---YVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQH 305

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 306 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 365

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 366 GLAINLI 372


>gi|354546450|emb|CCE43180.1| hypothetical protein CPAR2_208250 [Candida parapsilosis]
          Length = 427

 Score =  200 bits (509), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/372 (35%), Positives = 202/372 (54%), Gaps = 30/372 (8%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 21  QTDDVLNTKGKSFE-DFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGT 79

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  L +L K  + + Q +IL PTRE+A+Q + VVR++G H+  +      GGT
Sbjct: 80  GKTASFIIPCL-QLCKPKLNKIQALILVPTRELALQTSQVVRTLGKHL-GVQCMVTTGGT 137

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV I+VG+PGR+  +   K  ++    LF+MDEADK+++  F   I  I
Sbjct: 138 SLRDDIVRLNDPVHILVGTPGRVLDLASRKVADLSECPLFVMDEADKMLSREFKNIIEQI 197

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATR----PLLGVKQLVALIPE 241
               PP +Q L+ SAT+      T++ +M D  L +P +        L G+ Q  A    
Sbjct: 198 LEFFPPHRQALLFSATFP----ITVKHFM-DQHLNKPYEVNLMDELTLKGITQFYA---- 248

Query: 242 CKNPSLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
                  +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y    
Sbjct: 249 -------FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAK 301

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
             Q+AR      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR
Sbjct: 302 MPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGR 361

Query: 359 YGTRGLVITIVS 370
           +G  GL I ++S
Sbjct: 362 FGHLGLAINLMS 373


>gi|440799644|gb|ELR20688.1| Eukaryotic initiation factor 4A, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 412

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 123/353 (34%), Positives = 193/353 (54%), Gaps = 17/353 (4%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF K S IQ  A   +  G D I Q++SGTGK+  F +  L + I L  +  Q 
Sbjct: 52  RGIYAYGFEKPSAIQQRAIVPLSQGKDIIAQAQSGTGKTATFGIGILQQ-IDLAGKDAQA 110

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR----PVQIVVGSPGRIK 149
           +I+ PTRE+A Q+  V++++GAH+ N+      GGT+V+  +R     V +VVG+PGRI 
Sbjct: 111 LIVVPTRELAQQVHRVIQALGAHM-NIKAHILTGGTRVDDDRRILRDGVHVVVGTPGRIF 169

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            MI    L  + +R F++DEAD++++ GF E I  I+  LP   Q+ + SAT   + L  
Sbjct: 170 DMITRGELIAERIRTFVLDEADEMLSKGFEEIIRDIFKTLPHSVQVGIFSATLPPECLDI 229

Query: 210 LQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
            +++M +P  +L++ E+ T  L G+ Q       C+    +Y    + L  L +     Q
Sbjct: 230 TKRFMNNPVNILVKQEELT--LQGINQFYV---NCEREQWKY----ETLCDLYNDINITQ 280

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            VIF N + + + + E +   NF      G+ D   R   ++ F+ G  R+L+TTDL AR
Sbjct: 281 AVIFCNARRKVDWLTERMTRDNFTVSATHGSVDPSERKKIMEEFRTGSSRVLITTDLLAR 340

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           GID   V +VIN ++P     YLHR+GR+GR+G +GL +  V+ + L     L
Sbjct: 341 GIDVQQVSVVINYDLPRSKENYLHRIGRSGRFGRKGLALNFVTQDDLKDLRDL 393


>gi|389720718|ref|ZP_10187537.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. HA]
 gi|388609402|gb|EIM38574.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. HA]
          Length = 383

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 116/354 (32%), Positives = 195/354 (55%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           ++Q +   GF   +PIQ     + L G+DAI ++++GTGK+  F+V+ +N L+  PVQ+ 
Sbjct: 14  LKQAIDALGFSSMTPIQEKVLKFTLAGHDAIGRAQTGTGKTAAFLVSIINDLLNNPVQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR-----PVQI 140
                P+ +ILAPTRE+A+QI      +     +L V   +GG   ++ K      PV I
Sbjct: 74  RYRGEPRALILAPTRELALQIESDAHELNKFT-DLSVVTLLGGVDFDKQKAQLDKAPVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  +S     +Q L+ 
Sbjct: 133 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   Q+++ +P+ +  E   +    V+Q V ++ +         D+ K L  
Sbjct: 193 SATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVAK--------ADKYKLLQD 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L   P  + +IF+N + +   + ++L   N+    LSG   Q  RL  LD FK GK  I
Sbjct: 245 ILRDEPIEKVMIFANRRDQVRKLYDHLKRDNYKVVMLSGEIAQDKRLKMLDQFKNGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR GTRG+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTRGVSISFLSED 358


>gi|388507678|gb|AFK41905.1| unknown [Medicago truncatula]
          Length = 427

 Score =  200 bits (509), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 193/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D + Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQID 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            +P  Q   +IL  TRE+A QI         ++ +L V  F GG  ++  K  ++     
Sbjct: 110 PVP-GQVSALILCHTRELAYQICHEFEGFSTYLADLKVAVFYGGVNIKVHKDLLKNECPH 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ +VR FI+DE DK++ +    +D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPRDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLL--GVKQLVALIPECKNPSLRYVDEEKKL 256
           SAT S +     +K+M DP+ I  +D  +  L   V+  + L  E KN         +KL
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKN---------RKL 279

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHT 339

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS  S
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSS 396


>gi|219113631|ref|XP_002186399.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583249|gb|ACI65869.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 414

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 128/375 (34%), Positives = 204/375 (54%), Gaps = 24/375 (6%)

Query: 13  DVLSNIDVLFENDVLIEKP--IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           D  SN D   E+   +E P  + +G+   GF K S IQ  A    +   D I Q++SGTG
Sbjct: 31  DFDSNWDETIESFDAMELPEELLRGIFSYGFEKPSAIQQRAIKPTILAKDLIAQAQSGTG 90

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ 130
           K+  F +  L +L    +++ Q +ILAPTRE+A QI  VV ++G ++ ++ V   +GGT 
Sbjct: 91  KTATFAIGTLARL-DPKLRECQALILAPTRELAQQIQKVVLALGDYM-DIQVHACVGGTA 148

Query: 131 VERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
           V    R +Q    +VVG+PGR+  MI  + L +DS+R F +DEAD++++ GF + I  I+
Sbjct: 149 VRDDIRTLQAGVHVVVGTPGRVFDMINRRALRLDSIRQFFLDEADEMLSRGFKDQIYDIF 208

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPS 246
             LP   Q+ + SAT   D L   +++M +P+ I  +     L G+KQ            
Sbjct: 209 KFLPETVQVCLFSATMPLDVLEVTERFMREPVRILVKKDELTLEGIKQFYI--------- 259

Query: 247 LRYVDEE----KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              VD+E    + L  L       Q +I+ N + + + + E +   +F    + G  DQ+
Sbjct: 260 --SVDKEDWKLETLCDLYETLTITQAIIYCNTRRKVDWLQEEMQKRDFTVSCMHGDMDQR 317

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G +
Sbjct: 318 ERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTNRENYIHRIGRSGRFGRK 377

Query: 363 GLVITIVSAESLVKF 377
           G+ I  ++ E+ V++
Sbjct: 378 GVAINFLT-EADVRY 391


>gi|325184962|emb|CCA19454.1| DEAD box ATPdependent RNA helicase putative [Albugo laibachii Nc14]
          Length = 399

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 125/360 (34%), Positives = 194/360 (53%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   GF K S IQ  A    + G D I QS+SGTGK+ VF ++ L 
Sbjct: 28  FESMGLKEDLLR-GIYAYGFEKPSAIQQRAIKPAVQGRDVIAQSQSGTGKTAVFSISIL- 85

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP---- 137
           + I     + Q ++++PTRE+A Q   V+ ++G ++ N+     IGG  +    R     
Sbjct: 86  QTINSTSNETQALVISPTRELAEQTQKVMLALGDYM-NVQCHACIGGKSMGEDMRRLDYG 144

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQ+V G+PGRI  MI+ ++L   +++L ++DEAD+++N GF + I  IY  LPP  Q+LV
Sbjct: 145 VQVVSGTPGRIFDMIRRRHLRTRTIKLLVIDEADEMLNKGFKDQIYDIYRYLPPSTQVLV 204

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           VSAT   D L    K+M +P+ +  +     L G+KQ    + +          EE K  
Sbjct: 205 VSATMPQDVLDLTTKFMNEPVKVLVKRDELTLEGIKQFFVAVEQ----------EEWKFD 254

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + +   +  ANF    + G   Q+ R   +  F+ G
Sbjct: 255 TLCDLYDTLTITQAVIFCNTKRKVDWLTTKMREANFTVSSMHGDMPQRERDTIMQEFRSG 314

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L+TTD+  RG+D   V LVI  ++P++   Y+HR+GR+GR+G +G+ I  V  E +
Sbjct: 315 GSRVLITTDIWGRGLDVQQVSLVICYDLPNNRELYIHRIGRSGRFGRKGVAINFVKDEDV 374


>gi|302836427|ref|XP_002949774.1| hypothetical protein VOLCADRAFT_80795 [Volvox carteri f.
           nagariensis]
 gi|300265133|gb|EFJ49326.1| hypothetical protein VOLCADRAFT_80795 [Volvox carteri f.
           nagariensis]
          Length = 435

 Score =  200 bits (509), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 131/369 (35%), Positives = 197/369 (53%), Gaps = 31/369 (8%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           +++++  + Q + + GF   S +Q    P+ + G D + Q+KSG GK+ VFV++ L +L 
Sbjct: 44  ELMLKPELLQAIADCGFEHPSEVQHECIPHAILGNDVLCQAKSGMGKTAVFVLSILQQLD 103

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
             P  +   IIL  TRE+A QI        A +K + +  F GG  V + K  ++     
Sbjct: 104 PKP-NECHAIILCHTRELAFQICHEFTRFSARMKGVTIGNFYGGIPVTQNKETLKKSVPN 162

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRIKQ+ K   L +  VR F++DE DK++       D   I+   P  KQ+++ 
Sbjct: 163 IVVGTPGRIKQLAKEGALPLKHVRFFVLDECDKMLEKLDMRADCQEIFKMTPHEKQVMMF 222

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLG--VKQLVALIPECKNPSLRYVDEEKKL 256
           SAT + +  A  +K+M +P  +  +D ++  L   V+  V L  E KN         +KL
Sbjct: 223 SATLNPEMRAVCKKFMTNPQEVYVDDESKLTLHGLVQHYVMLHEEEKN---------RKL 273

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R +++ + L   NF +  + G  +Q+ R+    +FK GK 
Sbjct: 274 NDLLDALDFNQVVIFVKSVARAKMLNQLLNECNFPSVCIYGGMEQEERIKVYKNFKEGKH 333

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHD-------------AATYLHRMGRAGRYGTRG 363
           RILV TDL  RGID   V++VIN ++P               A TYLHR+GRAGR+GT+G
Sbjct: 334 RILVATDLVGRGIDIERVNIVINYDMPESDDKAKGESKHGNGADTYLHRVGRAGRFGTKG 393

Query: 364 LVITIVSAE 372
           L IT VS++
Sbjct: 394 LAITFVSSQ 402


>gi|431931469|ref|YP_007244515.1| DNA/RNA helicase [Thioflavicoccus mobilis 8321]
 gi|431829772|gb|AGA90885.1| DNA/RNA helicase, superfamily II [Thioflavicoccus mobilis 8321]
          Length = 629

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 111/342 (32%), Positives = 189/342 (55%), Gaps = 13/342 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + Q +Q  G+   + IQ    P++L G D + Q+++GTGK+  F +  L++ I +   +P
Sbjct: 35  VLQAVQALGYETPTGIQAQCIPHLLAGRDLLGQAQTGTGKTAAFALPVLSR-ISVEEARP 93

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++L PTRE+A+Q+ +  +S    ++  HV    GG     Q+ +  R   ++VG+PGR
Sbjct: 94  QVLVLTPTRELALQVAEAFQSYAQCLRGFHVLPLYGGQSYGLQIRQLGRGPHVIVGTPGR 153

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           I   ++   L++D +R  ++DEAD+++N GF EDI WI++Q P  +Q+ + SAT      
Sbjct: 154 IMDHLRRGTLSLDGIRTLVLDEADEMLNMGFAEDIDWIFAQAPAERQVALFSATMPPAIR 213

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
              Q ++ +P+ I+    +  +  ++Q   L+       L        L ++L   PF+ 
Sbjct: 214 RVAQTHLREPVEIKVAARSETVDTIEQHHCLVTRYHKLDL--------LTRVLEIQPFDA 265

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            +IF   +     + E L    F AE L+G  +Q  R  +++ F+ G++ ILV TD+AAR
Sbjct: 266 ILIFVRTKTETVELAERLCAHGFAAEALNGDMNQVMRERTVERFRDGRLDILVATDVAAR 325

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           G+D   V+LV+N +IP+D A Y+HR+GR GR G  G  +  V
Sbjct: 326 GLDVERVNLVVNYDIPNDPAAYVHRIGRTGRAGRAGRAVLFV 367


>gi|403221708|dbj|BAM39840.1| eukaryotic translation initiation factor 4a [Theileria orientalis
           strain Shintoku]
          Length = 399

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 126/374 (33%), Positives = 204/374 (54%), Gaps = 23/374 (6%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           +V+ + D L  N+ L+     +G+   GF + S IQ      ++  YD I Q++SGTGK+
Sbjct: 25  EVVDSFDALKLNENLL-----RGIYSYGFERPSAIQQRGIKPIIENYDTIGQAQSGTGKT 79

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE 132
             F +AAL ++I   +   Q +ILAPTRE+A QI  VV ++G ++K +     +GGT V 
Sbjct: 80  ATFSIAAL-QIINYDLMSCQILILAPTRELAQQIQKVVLALGDYLK-VQCHACVGGTVVR 137

Query: 133 ----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
               + K  V +VVG+PGR+  MI  K L  D ++LFI+DEAD++++ GF   I  ++ +
Sbjct: 138 DDVLKLKAGVHMVVGTPGRVYDMIDKKALLTDKMKLFILDEADEMLSRGFKGQIHEVFKK 197

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPS 246
           LP   Q+ + SAT  ++ L    K+M  P  +L++ ++ T  L G+KQ   LI +     
Sbjct: 198 LPRDIQVALFSATMPNEILELTTKFMRSPKRILVKKDELT--LEGIKQFYVLIEK----D 251

Query: 247 LRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLA 306
            ++      L  L       Q +I+ N + + + +   +   +F    + G   QK R  
Sbjct: 252 YKF----DTLCDLYESVTITQAIIYCNTRRKVDTLTAKMQEKDFTVSSMHGEMGQKERDL 307

Query: 307 SLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVI 366
            +  F+ G  R+L+TTDL ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I
Sbjct: 308 IMREFRSGSTRVLITTDLLARGIDVQQVSLVINYDLPVSPDNYIHRIGRSGRFGRKGVAI 367

Query: 367 TIVSAESLVKFHSL 380
             V+ + +    S+
Sbjct: 368 NFVTPQDMDAMKSI 381


>gi|331268314|ref|YP_004394806.1| ATP-dependent RNA helicase [Clostridium botulinum BKT015925]
 gi|329124864|gb|AEB74809.1| ATP-dependent RNA helicase [Clostridium botulinum BKT015925]
          Length = 528

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 200/360 (55%), Gaps = 13/360 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I   I++ + + GF   SPIQ  A P++L+G D I Q+++GTGK+  F + AL+  I
Sbjct: 8   DLPISDEIKRAIADMGFEAPSPIQEKAIPFILSGKDIIGQAQTGTGKTAAFGIPALDT-I 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQI 140
            L  +  Q ++L PTRE+A+Q T  V  +G + K++ V    GG  ++R     KR VQI
Sbjct: 67  DLNNKSLQIMVLCPTRELAIQATQEVHKLGKYKKDISVLAVYGGQPIDRQIKALKRGVQI 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           ++G+PGR+   I+ K L  D++++ ++DEAD++++ GF +DI  I  ++P  +Q ++ SA
Sbjct: 127 IIGTPGRVIDHIRRKTLKTDNIKMIVLDEADEMLDMGFRDDIETIIQEIPQNRQTILFSA 186

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T +   +   +KY  +   I+        +  KQL     E +   ++  ++ + L +L+
Sbjct: 187 TMAKAIIELSKKYQNNAEFIK--------VVHKQLTVPNIEQRYLEVKENNKLEVLSRLI 238

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                   VIF N + R + +   L    + AE L G   Q  R   ++ F+ G + ILV
Sbjct: 239 DMRNPKLSVIFCNTKKRVDEVVSQLQARGYFAEGLHGDMKQPQRDRVMNKFRNGTIEILV 298

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            TD+AARGID  +V+ V N ++P D   Y+HR+GR GR G  G+  T V+ +++ K   +
Sbjct: 299 ATDVAARGIDVDDVEAVFNYDLPQDEEYYVHRIGRTGRAGRSGIAFTFVAGKAIRKLRDI 358


>gi|428178789|gb|EKX47663.1| hypothetical protein GUITHDRAFT_159541 [Guillardia theta CCMP2712]
          Length = 406

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 126/372 (33%), Positives = 201/372 (54%), Gaps = 23/372 (6%)

Query: 13  DVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           D+ SN D + E  +D+ +++ + +G+   GF K S IQ      ++ G D I Q++SGTG
Sbjct: 23  DIESNWDHVCETFDDMGLDENLLRGIFAYGFEKPSAIQQRGTMPLIKGRDTIAQAQSGTG 82

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ 130
           K+  F +  L + I L  +  Q ++LAPTRE+A QI  VV ++G ++  +     IGGT 
Sbjct: 83  KTAAFSIGCLQR-IDLNEKDCQALLLAPTRELAQQIQKVVLALGDYM-GITCHACIGGTN 140

Query: 131 VERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
           V    R V    Q+VVG+PGR+  MI  + L  D +++F++DEAD++++ GF + I  ++
Sbjct: 141 VRDDIRKVEAGQQVVVGTPGRVHDMINRRALRTDGMKIFVLDEADEMLSRGFKDQIYDVF 200

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPS 246
             LP   Q+ + SAT   + L   + +M DP+ I  +     L G+KQ    I       
Sbjct: 201 KFLPSKVQVGLFSATMPIEVLEITRHFMRDPVRILVKKDELTLEGIKQFYIAI------- 253

Query: 247 LRYVDEEK----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
               D E      L  L       Q +I+ N + + + + E + + +F    L G  DQK
Sbjct: 254 ----DREDWKLDTLCDLYETLTITQAIIYVNTRRKVDWLLEKMTSRDFTVSALHGDMDQK 309

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G +
Sbjct: 310 GRELIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRK 369

Query: 363 GLVITIVSAESL 374
           G+ I  V+ + +
Sbjct: 370 GVAINFVTGDDV 381


>gi|77166069|ref|YP_344594.1| DEAD/DEAH box helicase [Nitrosococcus oceani ATCC 19707]
 gi|76884383|gb|ABA59064.1| ATP-dependent RNA helicase CsdA [Nitrosococcus oceani ATCC 19707]
          Length = 500

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 110/359 (30%), Positives = 196/359 (54%), Gaps = 13/359 (3%)

Query: 16  SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           S+ ++L  +   I  P+ Q +++ G+   + IQ  A P++L G+D + Q+++GTGK+  F
Sbjct: 3   SSTELLSFDSFAISAPVLQAIKQVGYETPTLIQARAIPHLLAGHDLVGQAQTGTGKTAAF 62

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQV 131
            +  L +L +L  ++PQ ++L PTRE+A+Q+ +  +S   ++++ HV    GG     Q+
Sbjct: 63  AIPTLERL-ELSQKEPQVLVLVPTRELAIQVAEAFQSYARYLEDFHVLPIYGGQSMGNQL 121

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
            + KR   ++VG+PGRI   ++ K L +  +   I+DEAD+++  GF+ED+ WI  Q+P 
Sbjct: 122 RQLKRGAHVIVGTPGRIMDHLRRKSLILTKLTTVILDEADEMLKMGFIEDVEWILKQVPT 181

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
            +Q+ + SAT          +++  P  I+ +  T  L  + Q   L+       L  +D
Sbjct: 182 KRQVALFSATMPTSVRNIASRHLQAPQDIKIKGETASLPAINQRYWLVS-----GLHKLD 236

Query: 252 EEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L ++L    ++  +IF   ++  E + + L    + A  L+G   Q +R   +D  
Sbjct: 237 ---ALTRMLEAEEYDATIIFVRTKIATEELAKKLMARGYAAAALNGDIPQSSREKVVDQL 293

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           K+  + I+V TD+AARG+D   +  V+N +IP+D  TY+HR+GR GR G  G     V+
Sbjct: 294 KKNTIDIIVATDVAARGLDVKRIGHVVNYDIPYDTGTYIHRIGRTGRAGRTGTATLFVA 352


>gi|367043982|ref|XP_003652371.1| hypothetical protein THITE_2154358 [Thielavia terrestris NRRL 8126]
 gi|346999633|gb|AEO66035.1| hypothetical protein THITE_2154358 [Thielavia terrestris NRRL 8126]
          Length = 397

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 134/381 (35%), Positives = 211/381 (55%), Gaps = 30/381 (7%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K I   +
Sbjct: 32  KPELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK-IDPNL 90

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGS 144
           +Q Q +ILAPTRE+A QI  VV ++G ++ N+     IGGT V    + +Q    +VVG+
Sbjct: 91  KQCQALILAPTRELAQQIQKVVVAIGDYM-NVECHACIGGTSVREDVKALQEGPQVVVGT 149

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR++ MI+ ++L  D++++F++DEAD++++ GF E I  I+  LP   Q++++SAT   
Sbjct: 150 PGRVQDMIQRRFLRTDAMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQ 209

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQ 258
           D L    K+M DP+ I  +     L G+KQ              Y+  EK+      L  
Sbjct: 210 DVLEVTTKFMRDPVRILVKKDELTLEGIKQF-------------YIAVEKEEWKLDTLSD 256

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  R+
Sbjct: 257 LYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRV 316

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFH 378
           L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +    
Sbjct: 317 LIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDV---- 372

Query: 379 SLMGEINLDHAFNVGLVPDNL 399
            +M EI   ++  +  +P N+
Sbjct: 373 RMMREIEQFYSTQIEEMPMNV 393


>gi|253681284|ref|ZP_04862082.1| cold-shock deAd box protein a [Clostridium botulinum D str. 1873]
 gi|253562522|gb|EES91973.1| cold-shock deAd box protein a [Clostridium botulinum D str. 1873]
          Length = 528

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 119/360 (33%), Positives = 199/360 (55%), Gaps = 13/360 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I   I++ + + GF   SPIQ  A P++L+G D I Q+++GTGK+  F + AL+  I
Sbjct: 8   DLPISDEIKRAIADMGFEAPSPIQEKAIPFILSGKDIIGQAQTGTGKTAAFGIPALDT-I 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQI 140
            L  +  Q ++L PTRE+A+Q T  V  +G + K ++V    GG  ++R     KR VQI
Sbjct: 67  DLDNKSLQIMVLCPTRELAIQATQEVHKLGKYKKGINVLAVYGGQPIDRQIKALKRGVQI 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           ++G+PGR+   I+ K L  D++++ ++DEAD++++ GF +DI  I   +P  +Q ++ SA
Sbjct: 127 IIGTPGRVIDHIRRKTLKTDNIKMIVLDEADEMLDMGFRDDIETIIQAIPQNRQTILFSA 186

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T +   +   +KY  +   I+        +  KQL     E +   ++  ++ + L +L+
Sbjct: 187 TMAKAIIELSKKYQNNAEFIK--------VVHKQLTVPNIEQRYLEVKENNKLEVLSRLI 238

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                   VIF N + R + +   L    + AE L G   Q  R   ++ F+ G + ILV
Sbjct: 239 DMRNPKLSVIFCNTKKRVDEVVSQLQARGYFAEGLHGDMKQPQRDRVMNKFRNGTIEILV 298

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
            TD+AARGID  +V+ V N ++P D   Y+HR+GR GR G  G+  T V+ +++ K   +
Sbjct: 299 ATDVAARGIDVDDVEAVFNYDLPQDEEYYVHRIGRTGRAGRSGIAFTFVAGKAIRKLRDI 358


>gi|357436963|ref|XP_003588757.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
 gi|355477805|gb|AES59008.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
          Length = 427

 Score =  200 bits (509), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 193/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D + Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQID 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            +P  Q   +IL  TRE+A QI         ++ +L V  F GG  ++  K  ++     
Sbjct: 110 PVP-GQVSALILCHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVHKDLLKNECPH 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ +VR FI+DE DK++ +    +D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLL--GVKQLVALIPECKNPSLRYVDEEKKL 256
           SAT S +     +K+M DP+ I  +D  +  L   V+  + L  E KN         +KL
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKN---------RKL 279

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHT 339

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS  S
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSS 396


>gi|398340413|ref|ZP_10525116.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Bim str.
           1051]
 gi|418679063|ref|ZP_13240328.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Grippotyphosa
           str. RM52]
 gi|418685350|ref|ZP_13246526.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Grippotyphosa
           str. Moskva]
 gi|418740862|ref|ZP_13297238.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Valbuzzi str.
           200702274]
 gi|421089722|ref|ZP_15550526.1| DEAD/DEAH box helicase [Leptospira kirschneri str. 200802841]
 gi|421131655|ref|ZP_15591835.1| DEAD/DEAH box helicase [Leptospira kirschneri str. 2008720114]
 gi|400320478|gb|EJO68347.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Grippotyphosa
           str. RM52]
 gi|410001546|gb|EKO52142.1| DEAD/DEAH box helicase [Leptospira kirschneri str. 200802841]
 gi|410357029|gb|EKP04314.1| DEAD/DEAH box helicase [Leptospira kirschneri str. 2008720114]
 gi|410739958|gb|EKQ84680.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Grippotyphosa
           str. Moskva]
 gi|410751457|gb|EKR08434.1| DEAD/DEAH box helicase [Leptospira kirschneri serovar Valbuzzi str.
           200702274]
          Length = 513

 Score =  200 bits (509), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 195/347 (56%), Gaps = 13/347 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I+  + E GF + SPIQ  A P +L G D I  +++GTGK+  F +  + +L++L  +  
Sbjct: 15  IQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTI-ELLELESKHL 73

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGR 147
           Q +IL PTRE+ +Q+++  R +  +  N  V    GG ++ER  R +    QIV+ +PGR
Sbjct: 74  QALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQIVIATPGR 133

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   +++D +++ ++DEAD++++ GF ED+ +I    P  +Q ++ SAT + D L
Sbjct: 134 MMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEYILKDTPSDRQTIMFSATMTDDIL 193

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
             ++K+   P +I   D T   L   ++  +  E +  +     + + L +L+       
Sbjct: 194 TLMKKFQNHPQII---DVTHQKLSAPKIEQIYYEIQENA-----KGEALTRLIEYRNVKL 245

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            ++F N +++ + + E L +  + AE L G  +QK R   ++ F++G + ILV TD+A R
Sbjct: 246 ALVFCNTKVQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRKGSIEILVATDVAGR 305

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           GID  N++ V N ++P D   Y+HR+GR GR G +G+  + +  + +
Sbjct: 306 GIDVNNIEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQI 352


>gi|350564547|ref|ZP_08933364.1| DEAD/DEAH box helicase domain protein [Thioalkalimicrobium
           aerophilum AL3]
 gi|349777566|gb|EGZ31929.1| DEAD/DEAH box helicase domain protein [Thioalkalimicrobium
           aerophilum AL3]
          Length = 609

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 149/514 (28%), Positives = 257/514 (50%), Gaps = 40/514 (7%)

Query: 16  SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           + +D+ FE+  LI + + Q L++ G+   SPIQ  A P +L G D +  +++GTGK+  F
Sbjct: 4   NTVDITFESFNLIPQ-VLQALKDVGYETPSPIQAQAIPPILEGRDILGMAQTGTGKTAAF 62

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QV 131
            +  L++ + +    PQ ++LAPTRE+A+Q+ +  +S   H+K  HV    GG     Q+
Sbjct: 63  ALPLLSR-VDIKNTNPQILVLAPTRELAIQVAEAFQSFAHHMKGFHVLPIYGGQEYGGQI 121

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
              KR  Q+VVG+PGR+   ++   LN+D+++  ++DEAD+++  GF++D+ W+  Q P 
Sbjct: 122 RALKRGAQVVVGTPGRVMDHMRKGTLNLDNLQALVLDEADEMLRMGFIDDVEWVLEQTPQ 181

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
            +Q+ + SAT   +      +++ +P+ +  +  T     + Q   L+       L  +D
Sbjct: 182 DRQIALFSATMPKEVHKIASRHLNNPVEVIIKQKTGTASTITQSYWLVS-----GLHKLD 236

Query: 252 EEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L ++L  T F+  +IF   +     + E L    + A  L+G   Q  R   +D  
Sbjct: 237 ---ALTRILEATEFDGMIIFVRTKTATIELAEKLEARGYAAAALNGDIAQNHRERIVDQL 293

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           K+GK+ IL+ TD+ ARG+D   +  V+N +IP+D  +Y+HR+GR GR G  G  I  V+ 
Sbjct: 294 KKGKIDILIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFVAP 353

Query: 372 ESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVE--- 428
                   L+ +I  + A N  +    L   Q    QRV+   A+  D A E+E +E   
Sbjct: 354 RE----RRLLQQI--ERATNKKIDMLTLPSTQDINDQRVEKFKARITD-ALEQEGLEFYQ 406

Query: 429 QTAEESSKVENTKPLRGAPSKEVTKKGASKEGTKWNLTDGQSEEESDSENDGKPDENGSQ 488
           Q  E+  +  N   L  A +     +G     T + L D    + S  ++D         
Sbjct: 407 QMIEDLQQASNVPALEIAAALAKLVQG----DTPFFLEDKPMRQASFRDDD--------- 453

Query: 489 RGSKRSKEFKTQEKCVKGAGE--DENGDRKASKD 520
           RG++  ++F  +E+  +G  +  +  GDR    D
Sbjct: 454 RGARGERDFG-RERPARGRSDRFERGGDRPERGD 486


>gi|357135173|ref|XP_003569186.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
           [Brachypodium distachyon]
          Length = 429

 Score =  200 bits (509), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/357 (36%), Positives = 194/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 52  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQID 111

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI +       ++    V  F GG  +++ K  ++    
Sbjct: 112 --PVAGQVAALVLCHTRELAYQICNEFERFSKYLSETKVAVFYGGVHIKKHKDLLKNECP 169

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++++     D+  I+   P  KQ+++
Sbjct: 170 HIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 229

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D A   L G+ Q            L   ++ +KL
Sbjct: 230 FSATLSKEIRPICKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEAEKNRKL 281

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL    +FK G  
Sbjct: 282 NDLLDALDFNQIVIFVKSVGRASELNKLLCECNFPAICIHSGMTQEERLTRYKNFKEGHK 341

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 342 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 398


>gi|367031516|ref|XP_003665041.1| hypothetical protein MYCTH_2308335 [Myceliophthora thermophila ATCC
           42464]
 gi|347012312|gb|AEO59796.1| hypothetical protein MYCTH_2308335 [Myceliophthora thermophila ATCC
           42464]
          Length = 549

 Score =  200 bits (509), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 197/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 37  QTEDVTNTKGLDFE-DFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL K I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 96  GKTAAFVIPALEK-INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 153

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +   +  ++    +FIMDEADKL++  F   I  +
Sbjct: 154 GLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSAEFTPVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K M  P  I   D    L G+ Q  A        
Sbjct: 214 LRFHPKDRQVMLFSATFPISVKDFADKNMSSPYEINLMDELT-LRGITQYYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              YV+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 265 ---YVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQ 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 322 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 381

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 382 GLAINLI 388


>gi|320583039|gb|EFW97255.1| Cytoplasmic DExD/H-box helicase [Ogataea parapolymorpha DL-1]
          Length = 451

 Score =  200 bits (509), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/374 (35%), Positives = 202/374 (54%), Gaps = 29/374 (7%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL+     FE+  L ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 19  QTDDVLATKGNTFESFHL-KRELLMGIFEAGFEKPSPIQEEAIPVALMGRDILARAKNGT 77

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L KL K  V + Q +IL PTRE+A+Q + VV+++GAH+  + V    GGT
Sbjct: 78  GKTAAFVIPTLEKL-KPKVNKIQALILVPTRELALQTSQVVKTLGAHL-GIQVMVTTGGT 135

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF---VEDI 182
                + R   PV ++VG+PGR+  +   K    D  R+F+MDEADK+++  F   +E I
Sbjct: 136 SLRDDIMRLHEPVHVLVGTPGRVLDLASRKLAEFDECRMFVMDEADKMLSREFKNIIEQI 195

Query: 183 TWIYSQLPPMK----QMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVAL 238
              + Q    K    Q L+ SAT+     + + +++  P  I   D    L G+ Q  A 
Sbjct: 196 LKFFPQSSSGKGNGYQSLLFSATFPLAVKSFMDQHLYKPYEINLMDELT-LKGITQYYA- 253

Query: 239 IPECKNPSLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYL 295
                     +V+E++KL     L S+   NQ +IF N   R E++ + +   ++   Y 
Sbjct: 254 ----------FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLSKKITELDYSCYYS 303

Query: 296 SGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGR 355
                Q AR      F++GKVR LV +DL  RGID   V++V+N + P  A TYLHR+GR
Sbjct: 304 HAKMPQAARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVVNFDFPKTAETYLHRIGR 363

Query: 356 AGRYGTRGLVITIV 369
           +GR+G  G+ I ++
Sbjct: 364 SGRFGHFGIAINLI 377


>gi|302772815|ref|XP_002969825.1| hypothetical protein SELMODRAFT_146823 [Selaginella moellendorffii]
 gi|300162336|gb|EFJ28949.1| hypothetical protein SELMODRAFT_146823 [Selaginella moellendorffii]
          Length = 428

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 125/356 (35%), Positives = 191/356 (53%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 51  DFLLKPELVRAIVDCGFEHPSEVQFECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIE 110

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            L   Q   ++L  TRE+A QI         ++ ++ V  F GG  ++  K  ++     
Sbjct: 111 PLK-GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKTHKDLLKNECPH 169

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI Q+ + K L++  VR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 170 IVVGTPGRILQLTREKELSLKGVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMF 229

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +++M DP+ I  +D  +  L G+ Q    + E         ++ +KL 
Sbjct: 230 SATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE--------AEKNRKLN 281

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  R
Sbjct: 282 DLLDALDFNQVVIFVKSVNRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 341

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT V++ +
Sbjct: 342 ILVATDLVGRGIDIERVNIVINYDMPESADTYLHRVGRAGRFGTKGLAITFVASST 397


>gi|260777273|ref|ZP_05886167.1| cold-shock DEAD-box protein A [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606939|gb|EEX33213.1| cold-shock DEAD-box protein A [Vibrio coralliilyticus ATCC BAA-450]
          Length = 641

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 197/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P+++ G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNDSILSALDGMGFVSPTPIQAAAIPHLMEGTDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
            +L  ++PQ I+LAPTRE+A+Q+   ++++G ++  L V    GG     Q+   K    
Sbjct: 69  -ELSQRKPQAIVLAPTRELAIQVAAEIKNLGQNISGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 IVVGTPGRVQDLINRERLHLDEVHTFVLDEADEMLNMGFVDDVTEIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ I        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLRDPITIDVAGKNHTVDKVEQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKASALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|429856183|gb|ELA31107.1| ATP-dependent RNA helicase eif4a [Colletotrichum gloeosporioides
           Nara gc5]
          Length = 396

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 211/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DDMDLKSELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 85  IDSNVKQCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALQDGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  D +++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|448511655|ref|XP_003866579.1| hypothetical protein CORT_0A07540 [Candida orthopsilosis Co 90-125]
 gi|380350917|emb|CCG21140.1| hypothetical protein CORT_0A07540 [Candida orthopsilosis Co 90-125]
          Length = 427

 Score =  200 bits (509), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/350 (35%), Positives = 190/350 (54%), Gaps = 21/350 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GTGK+  F++  L +L K  
Sbjct: 38  LKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCL-QLCKPK 96

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRPVQIVVG 143
           + + Q +IL PTRE+A+Q + VVR++G H+  +      GGT     + R   PV I+VG
Sbjct: 97  LNKIQALILVPTRELALQTSQVVRTLGKHL-GVQCMVTTGGTSLRDDIVRLNDPVHILVG 155

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  +   K  ++    LF+MDEADK+++  F   I  I    PP +Q L+ SAT+ 
Sbjct: 156 TPGRVLDLASRKLADLSECPLFVMDEADKMLSREFKNIIEQILEFFPPHRQALLFSATFP 215

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV---QLL 260
                 + +++  P  I   D    L G+ Q  A           +V+E++KL     L 
Sbjct: 216 ITVKHFMDQHLNKPYEINLMDELT-LKGISQFYA-----------FVEEKQKLHCLNTLF 263

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
           S+   NQ +IF N   R E++ + +    +   Y      Q+AR      F++GKVR LV
Sbjct: 264 SKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLV 323

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  GL I ++S
Sbjct: 324 CSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 373


>gi|218676896|ref|YP_002395715.1| ATP-dependent RNA helicase [Vibrio splendidus LGP32]
 gi|218325164|emb|CAV27059.1| ATP-dependent RNA helicase [Vibrio splendidus LGP32]
          Length = 689

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 121/355 (34%), Positives = 195/355 (54%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ + + I   L   GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNK 
Sbjct: 37  NELALNENILSALDSMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAFSLPLLNK- 95

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I L   +PQ II+APTRE+A+Q+   ++++G  +K L V    GG     Q+    R   
Sbjct: 96  INLNQHKPQAIIMAPTRELAIQVAAEIKNLGRDIKGLKVLEIYGGASIVDQMRALSRGAH 155

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K ++    L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 156 IVVGTPGRVKDLLTRDRLHLDEAHTFVLDEADEMLKMGFVDDVTWILEQAPESAQRVLFS 215

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +VD  L  P  A   + G    V  + +     ++ V++++ + +L
Sbjct: 216 AT-----MPPMVKTIVDRYLRNP--AKVDVAGTNHTVDKVAQ-NYWVVKGVEKDEAMSRL 267

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 268 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 327

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 328 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 382


>gi|357135175|ref|XP_003569187.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
           [Brachypodium distachyon]
          Length = 428

 Score =  200 bits (509), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/357 (36%), Positives = 193/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 51  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQID 110

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI +       ++    V  F GG  +++ K  ++    
Sbjct: 111 --PVAGQVAALVLCHTRELAYQICNEFERFSKYLSETRVAVFYGGVHIKKHKDLLKNECP 168

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++++     D+  I+   P  KQ+++
Sbjct: 169 HIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 228

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D A   L G+ Q            L   ++ +KL
Sbjct: 229 FSATLSKEIRPICKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEAEKNRKL 280

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   +   L   NF A  +     Q+ RL    +FK G  
Sbjct: 281 NDLLDALDFNQIVIFVKSVGRASELNRLLCECNFPAICIHSGMTQEERLTRYKNFKEGHK 340

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 341 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 397


>gi|320355280|ref|YP_004196619.1| DEAD/DEAH box helicase [Desulfobulbus propionicus DSM 2032]
 gi|320123782|gb|ADW19328.1| DEAD/DEAH box helicase domain protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 552

 Score =  200 bits (509), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 113/342 (33%), Positives = 192/342 (56%), Gaps = 16/342 (4%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP-Q 92
           Q + E GF   +PIQ AA P +L G D I Q+++GTGK+  F +  L ++   P QQ  Q
Sbjct: 17  QTVTELGFTDPTPIQQAAIPLLLEGRDLIGQAQTGTGKTAAFGLPLLQRIT--PRQQGVQ 74

Query: 93  TIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGRI 148
            ++LAPTRE+A+Q+ + ++  G   + + V    GG     Q+   ++ V+++VG+PGR+
Sbjct: 75  ALVLAPTRELAIQVAEAIQRYGQQ-RGITVLAVYGGQAYQQQIRSLRQGVEVIVGTPGRL 133

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLA 208
             ++    L++ +VR  ++DEAD++++ GFVEDI  I  ++P  +Q ++ SAT S   L 
Sbjct: 134 LDLMNQGTLDLTTVRTVVLDEADEMLSMGFVEDIELILDRIPAERQTMLFSATISKRVLG 193

Query: 209 TLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQC 268
              +Y+ DP  +         +  KQL     E +   +   D+   L +L      +  
Sbjct: 194 LSARYLRDPETVS--------ITPKQLTGATIEQRYYLVNQQDKVAALTRLFEMETIDSA 245

Query: 269 VIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARG 328
           +IF+  ++    +   L +  F AE L+G   Q AR+  L+ F+ G+V++LV TD+AARG
Sbjct: 246 LIFTRTRIGTGELANQLTSRGFPAEALNGDLSQDARIQVLNRFRNGQVKVLVATDVAARG 305

Query: 329 IDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +D  ++  V N ++P D   Y+HR+GR GR G  G+ I++++
Sbjct: 306 LDIDDISHVFNFDLPDDPEVYVHRVGRTGRAGREGIAISLLT 347


>gi|15215678|gb|AAK91384.1| AT3g19760/MMB12_21 [Arabidopsis thaliana]
 gi|25090064|gb|AAN72219.1| At3g19760/MMB12_21 [Arabidopsis thaliana]
          Length = 408

 Score =  200 bits (509), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 199/358 (55%), Gaps = 19/358 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           ND+ I++ + +G+ E GF K S IQ  A   +L G D I Q++SGTGK+   +  ++ ++
Sbjct: 38  NDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKT-SMIALSVCQV 96

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQ 139
           +    ++ Q +IL+PTR +A Q    ++++G H  N+     IGG  V    R     V 
Sbjct: 97  VDTSSREVQALILSPTRGLATQTEKTIQAIGLH-ANIQAHACIGGNSVGEDIRKLEHGVH 155

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +V G+PGR+  MIK + L   +++L I+DE+D++++ GF + I  +Y  LPP  Q+ +VS
Sbjct: 156 VVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVS 215

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT  H+ L    K+M +P+ I  +     L G+KQ    + +          EE K   L
Sbjct: 216 ATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEK----------EEWKFDTL 265

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + E + + NF    + G   QK R A ++ F+ G  
Sbjct: 266 CDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDS 325

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           R+L+TTD+ ARGID   V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V ++ +
Sbjct: 326 RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 383


>gi|281415806|ref|ZP_06247548.1| DNA/RNA helicase, superfamily II [Micrococcus luteus NCTC 2665]
          Length = 597

 Score =  200 bits (508), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 123/372 (33%), Positives = 200/372 (53%), Gaps = 28/372 (7%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  +   I + L+  G V   PIQ    P  L G+D I Q+K+GTGK++ F + AL + I
Sbjct: 41  DFGVHPAIVEALEAKGIVHPFPIQAMTLPVALGGHDIIGQAKTGTGKTLGFGIPALQRAI 100

Query: 85  ------------KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG---- 128
                       K     PQ +I+APTRE+AVQ+   + +  A  + L +    GG    
Sbjct: 101 GPGEPGWDGLEAKGTAGAPQALIVAPTRELAVQVAGDLTAAAAR-RPLRIATIYGGRAYE 159

Query: 129 TQVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
            Q+E  +R V+IVVG+PGR+  +++ ++L +D V   ++DEAD++++ GF+ D+  + + 
Sbjct: 160 PQIEELQRGVEIVVGTPGRLIDLMRQRHLRLDLVNTVVLDEADEMLDLGFLPDVETLLAA 219

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR---PEDATRPLLGVKQLVALIPECKNP 245
           +P ++Q ++ SAT     +A  ++YM  P  IR   PED       ++QLV         
Sbjct: 220 VPAVRQTMLFSATMPGPVVAMARRYMTQPTHIRAADPEDEGLTKKDIRQLVY-------- 271

Query: 246 SLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              ++D+++ + + L      + +IF+  +     + + L    F A  L G   Q AR 
Sbjct: 272 RAHHMDKDELVARALQAEGRGRTIIFTRTKRTAARVADELTARGFAAGALHGDLGQGARE 331

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
            +L +F+ GKV ILV TD+AARGID  +V  V N + P D  TY+HR+GR GR G +G+ 
Sbjct: 332 QALRAFRNGKVDILVATDVAARGIDVDDVTHVFNFQAPEDEKTYVHRVGRTGRAGNKGVA 391

Query: 366 ITIVSAESLVKF 377
           +T+V  E + ++
Sbjct: 392 VTLVDWEDMPRW 403


>gi|148977343|ref|ZP_01813957.1| ATP-dependent RNA helicase DeaD [Vibrionales bacterium SWAT-3]
 gi|145963456|gb|EDK28720.1| ATP-dependent RNA helicase DeaD [Vibrionales bacterium SWAT-3]
          Length = 646

 Score =  200 bits (508), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 117/355 (32%), Positives = 192/355 (54%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ + + I   L   GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNK 
Sbjct: 9   NELALNENILSALDSMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAFSLPLLNK- 67

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I L   +PQ II+APTRE+A+Q+   ++++G  +K L V    GG     Q+    R   
Sbjct: 68  INLNQHKPQAIIMAPTRELAIQVAAEIKNLGRDIKGLKVIEIYGGASIVDQMRALSRGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K ++    L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLLTRDRLHLDEAHTFVLDEADEMLKMGFVDDVTWILEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        + +Y+ +P  +        +  V Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMVKTIVDRYLRNPAKVDVAGTNHTVDKVAQNFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|405952464|gb|EKC20273.1| Spliceosome RNA helicase BAT1 [Crassostrea gigas]
          Length = 486

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 126/381 (33%), Positives = 207/381 (54%), Gaps = 21/381 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  +   D + Q+KSG GK+ VFV+A L +L 
Sbjct: 48  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQL- 106

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++LA TRE+A QI+        ++ N+ +  F GG  +++ +  ++    
Sbjct: 107 -EPVDGQVSVLVLAHTRELAFQISKEYERFSKYMNNVKIAVFFGGMSIKKDEDVLKKNCP 165

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            I+VG+PGRI  +   K LN+ +V+ F++DE DK++       D+  I+   P  KQ+++
Sbjct: 166 HIIVGTPGRILALCHSKVLNLKNVKHFVLDECDKMLAALDMRRDVQEIFRNTPHEKQVMM 225

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLL-GVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +  A  +++M DP+ +  +D ++  L G++Q            L+  ++ +KL
Sbjct: 226 FSATLSKEIRAVCKRFMQDPMEVYVDDDSKLTLHGLQQ--------HYVKLKDNEKNRKL 277

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            +LL    FNQ +IF     R   + + L   NF A  +  A  Q+ RL+    FK  + 
Sbjct: 278 FELLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFQK 337

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 338 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAK 397

Query: 377 FHSLMGEINLDHAFNVGLVPD 397
              ++ E+      N+  +PD
Sbjct: 398 ---VLNEVQERFEVNITELPD 415


>gi|28900463|ref|NP_800118.1| ATP-dependent RNA helicase DeaD [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365616|ref|ZP_05778137.1| cold-shock DEAD box protein A [Vibrio parahaemolyticus K5030]
 gi|260877415|ref|ZP_05889770.1| cold-shock DEAD box protein A [Vibrio parahaemolyticus AN-5034]
 gi|260898897|ref|ZP_05907338.1| cold-shock DEAD box protein A [Vibrio parahaemolyticus Peru-466]
 gi|260901269|ref|ZP_05909664.1| cold-shock DEAD box protein A [Vibrio parahaemolyticus AQ4037]
 gi|433659726|ref|YP_007300585.1| Cold-shock DEAD-box protein A [Vibrio parahaemolyticus BB22OP]
 gi|28808843|dbj|BAC61951.1| ATP-dependent RNA helicase DeaD [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308089202|gb|EFO38897.1| cold-shock DEAD box protein A [Vibrio parahaemolyticus Peru-466]
 gi|308090808|gb|EFO40503.1| cold-shock DEAD box protein A [Vibrio parahaemolyticus AN-5034]
 gi|308106808|gb|EFO44348.1| cold-shock DEAD box protein A [Vibrio parahaemolyticus AQ4037]
 gi|308111459|gb|EFO48999.1| cold-shock DEAD box protein A [Vibrio parahaemolyticus K5030]
 gi|432511113|gb|AGB11930.1| Cold-shock DEAD-box protein A [Vibrio parahaemolyticus BB22OP]
          Length = 643

 Score =  200 bits (508), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLDQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLRDPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|168059571|ref|XP_001781775.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666777|gb|EDQ53423.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 432

 Score =  200 bits (508), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 126/354 (35%), Positives = 191/354 (53%), Gaps = 16/354 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L + I
Sbjct: 48  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ-I 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
           +    Q   ++L  TRE+A QI         ++ ++ V  F GG  ++  K  ++     
Sbjct: 107 EPVAGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKTHKDLLKNECPH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ SVR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 167 IVVGTPGRILGLARDKDLSLKSVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +++M DP+ I  +D  +  L G+ Q    + E        V++ +KL 
Sbjct: 227 SATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE--------VEKNRKLN 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  R
Sbjct: 279 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT V++
Sbjct: 339 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 392


>gi|386314915|ref|YP_006011080.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
 gi|319427540|gb|ADV55614.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
          Length = 539

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 200/379 (52%), Gaps = 20/379 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK-- 85
           +  PI + + E G+   SPIQ  A P VL G D +  +++GTGK+  F +  L  L K  
Sbjct: 8   LSAPILKAVAEQGYDTPSPIQAQAIPAVLQGQDVMAAAQTGTGKTAGFTLPLLELLSKGQ 67

Query: 86  -LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
                Q +T++L PTRE+A Q+ + V + G ++  L      GG     Q+ + +  V +
Sbjct: 68  KAQAGQVRTLVLTPTRELAAQVAESVETYGKYLP-LRSAVVFGGVPINPQIAKLRHGVDV 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +V +PGR+  +   K +  + + + ++DEAD++++ GF+ DI  I + LP  +Q L+ SA
Sbjct: 127 LVATPGRLMDLYNQKAVKFNQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSA 186

Query: 201 TYSHDNLATLQKYMVD-PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           T+S D +  L K +V+ P+ I           VKQ V  + + +  +L        L QL
Sbjct: 187 TFS-DEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKGQKSAL--------LTQL 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           + Q  + Q ++FS  +     + +NL  A   A  + G + Q AR  +L  FK G+VR+L
Sbjct: 238 IKQHDWQQVLVFSRTKHGANRLAKNLEEAGIKAAAIHGNKSQTARTKALADFKNGQVRVL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARG+D   +  V+N ++P+    Y+HR+GR GR G  G  +++VS+E +   + 
Sbjct: 298 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEIKLLND 357

Query: 380 LMGEIN--LDHAFNVGLVP 396
           +   IN  LD     G  P
Sbjct: 358 IERLINRILDREVVEGFNP 376


>gi|407686365|ref|YP_006801538.1| ATP-dependent RNA helicase [Alteromonas macleodii str. 'Balearic
           Sea AD45']
 gi|407289745|gb|AFT94057.1| ATP-dependent RNA helicase [Alteromonas macleodii str. 'Balearic
           Sea AD45']
          Length = 596

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 199/360 (55%), Gaps = 16/360 (4%)

Query: 16  SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           + +D+ F+ D+ + +PI Q L++ G+ K SPIQ  + P +L G+D + Q+++GTGK+  F
Sbjct: 3   TTVDMTFK-DLNLPEPILQALEKVGYEKPSPIQAESIPLLLEGHDLLGQAQTGTGKTAAF 61

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQV 131
            +  L   I    ++PQ ++LAPTRE+A+Q+ +  +   +  + + V    GG     Q+
Sbjct: 62  ALPMLAN-IDPEQRKPQLLVLAPTRELAIQVAEAFQVYASFSQKIKVLPVYGGQSYDNQI 120

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
            + KR VQ+VVG+PGRI   IK K L++  ++  ++DEAD+++  GF++D+  I S  P 
Sbjct: 121 RQLKRGVQVVVGTPGRIIDHIKRKTLDLSELKFLVLDEADEMLRMGFIDDVELILSHAPE 180

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI-PECKNPSLRYV 250
            +Q  + SAT         Q+Y+ DP  ++          ++Q    I P  K       
Sbjct: 181 ERQTALFSATMPGPIKKITQRYLKDPKHVKIASKVSTASTIRQRYCQIAPHHKL------ 234

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
              + L +++    F+  +IF   +     + + L+   +  E L+G   Q AR  +++ 
Sbjct: 235 ---EALTRIMEVEVFDGMIIFVRTKTATVELADKLSARGYDVEPLNGDIPQAARERTVEK 291

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            K+GK+ ILV TD+ ARG+D   V  VIN +IP+D+ +Y+HR+GR GR G +G  I  +S
Sbjct: 292 LKQGKIDILVATDVVARGLDVERVSHVINYDIPYDSESYVHRIGRTGRAGRQGDAILFIS 351


>gi|87119807|ref|ZP_01075704.1| DEAD/DEAH box helicase-like [Marinomonas sp. MED121]
 gi|86165283|gb|EAQ66551.1| DEAD/DEAH box helicase-like [Marinomonas sp. MED121]
          Length = 450

 Score =  200 bits (508), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 121/359 (33%), Positives = 195/359 (54%), Gaps = 26/359 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL---I 84
           + KPI   ++E+G+ K SPIQ  A P +L   D +  +++GTGK+  F +  L  L    
Sbjct: 8   LSKPILTAIKESGYSKPSPIQQQAIPAILESNDIMAAAQTGTGKTAGFTLPLLEILSRGA 67

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
           K    Q + ++L PTRE+A Q+ D V + G H+ NL  D   GG     Q+ R ++   I
Sbjct: 68  KANANQVRALVLTPTRELAAQVADSVATYGQHL-NLRSDVVFGGVKINPQMMRLRKGTDI 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +V +PGR+  +   K +  D + + ++DEAD++++ GF+ DI  + + LP  +Q L+ SA
Sbjct: 127 LVATPGRLLDLYNQKAIRFDQLEVLVLDEADRMLDMGFIHDIKKVLALLPKRRQNLLFSA 186

Query: 201 TYSHDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK--- 255
           T+S D     +  M +P+   + P +A  P   VK L           L  VD+++K   
Sbjct: 187 TFSDDIRQLAKGLMNNPVEVSVSPANAATPT--VKHL-----------LHPVDKKEKTAL 233

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L+ L+    + Q ++FS  +     I + L +A   A  + G + Q AR  +L  FK   
Sbjct: 234 LIHLIVTQDWQQALVFSRTKHGANKIVQKLNDAGISAAAIHGNKSQGARTKALADFKNSD 293

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +RILV TD+AARGID   +  V+N ++P+ A  Y+HR+GR GR G  G  +++VSA+ +
Sbjct: 294 IRILVATDIAARGIDIEQLPQVVNFDLPNVAEDYVHRIGRTGRAGATGKAVSLVSADEV 352


>gi|406595506|ref|YP_006746636.1| ATP-dependent RNA helicase [Alteromonas macleodii ATCC 27126]
 gi|407682465|ref|YP_006797639.1| ATP-dependent RNA helicase [Alteromonas macleodii str. 'English
           Channel 673']
 gi|406372827|gb|AFS36082.1| ATP-dependent RNA helicase [Alteromonas macleodii ATCC 27126]
 gi|407244076|gb|AFT73262.1| ATP-dependent RNA helicase [Alteromonas macleodii str. 'English
           Channel 673']
          Length = 596

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 199/360 (55%), Gaps = 16/360 (4%)

Query: 16  SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           + +D+ F+ D+ + +PI Q L++ G+ K SPIQ  + P +L G+D + Q+++GTGK+  F
Sbjct: 3   TTVDMTFK-DLNLPEPILQALEKVGYEKPSPIQAESIPLLLEGHDLLGQAQTGTGKTAAF 61

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQV 131
            +  L   I    ++PQ ++LAPTRE+A+Q+ +  +   +  + + V    GG     Q+
Sbjct: 62  ALPMLAN-IDPEERKPQLLVLAPTRELAIQVAEAFQVYASFSQKIKVLPVYGGQSYDNQI 120

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
            + KR VQ+VVG+PGRI   IK K L++  ++  ++DEAD+++  GF++D+  I S  P 
Sbjct: 121 RQLKRGVQVVVGTPGRIIDHIKRKTLDLSELKFLVLDEADEMLRMGFIDDVELILSHAPE 180

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI-PECKNPSLRYV 250
            +Q  + SAT         Q+Y+ DP  ++          ++Q    I P  K       
Sbjct: 181 ERQTALFSATMPGPIKKITQRYLKDPKHVKIASKVSTASTIRQRYCQIAPHHKL------ 234

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
              + L +++    F+  +IF   +     + + L+   +  E L+G   Q AR  +++ 
Sbjct: 235 ---EALTRIMEVEVFDGMIIFVRTKTATVELADKLSARGYDVEPLNGDIPQAARERTVEK 291

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            K+GK+ ILV TD+ ARG+D   V  VIN +IP+D+ +Y+HR+GR GR G +G  I  +S
Sbjct: 292 LKQGKIDILVATDVVARGLDVERVSHVINYDIPYDSESYVHRIGRTGRAGRQGDAILFIS 351


>gi|223997764|ref|XP_002288555.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975663|gb|EED93991.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 369

 Score =  200 bits (508), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 123/348 (35%), Positives = 188/348 (54%), Gaps = 19/348 (5%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF K S IQ  A   ++ G D I QS+SGTGK+ VF +++L +L+      PQ 
Sbjct: 9   RGIYAYGFEKPSAIQQRAIRPIVCGRDVIAQSQSGTGKTAVFSISSL-QLLDERSNDPQV 67

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR----PVQIVVGSPGRIK 149
           +IL+PTRE+A Q   VV S+G  + N+     IGG  +   ++     VQ++ G+PGR+ 
Sbjct: 68  LILSPTRELAEQTQRVVSSLGDFM-NVKCHACIGGKSLGEDRKVLQQGVQVLSGTPGRVY 126

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            +IK   L   +++ FI+DEAD+++N GF E I  IY  LPP  Q+++VSAT   + L  
Sbjct: 127 DLIKRGDLTTRALKAFIIDEADEMLNKGFKEQIYDIYRYLPPQTQVVLVSATLPVEVLEM 186

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLSQTPFN 266
            +K+M DP+ I  +     L G+KQ    + +          EE K   L  L       
Sbjct: 187 TRKFMNDPIRILVKRDELTLEGIKQFFVSVEK----------EEWKFDTLCDLYDTLTVT 236

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q VIF N + + + +   +  +NF    + G   Q  R   ++ F+ G  R+L+ TDL  
Sbjct: 237 QAVIFCNTKQKVDWLATKMRESNFTVAAMHGDMTQDERDKVMEDFRSGSSRVLIATDLWG 296

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           RGID   V LVI  ++P +   Y+HR+GR+GR+G +G+ I  V  E +
Sbjct: 297 RGIDVQQVSLVICYDLPTNRELYIHRIGRSGRFGRKGVAINFVRTEDV 344


>gi|153939895|ref|YP_001390000.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
           Langeland]
 gi|384461069|ref|YP_005673664.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
           230613]
 gi|152935791|gb|ABS41289.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
           Langeland]
 gi|295318086|gb|ADF98463.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum F str.
           230613]
          Length = 425

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 203/378 (53%), Gaps = 25/378 (6%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQERSIPYILDGKDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--------LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT-- 129
           L  L K         P++    ++LAPTRE+A+QI +     G ++ NL      GG   
Sbjct: 60  LQNLSKDKKANKNPRPIR---ALVLAPTRELAIQIAESFECYGKYI-NLKSAVIFGGVSQ 115

Query: 130 --QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYS 187
             Q +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S
Sbjct: 116 NPQTKVLREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIIS 175

Query: 188 QLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSL 247
           +LP ++Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  +L
Sbjct: 176 KLPKVRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRAL 235

Query: 248 RYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLAS 307
                   L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +
Sbjct: 236 --------LKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRA 287

Query: 308 LDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVIT 367
           L++FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+
Sbjct: 288 LNNFKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAIS 347

Query: 368 IVSAESLVKFHSLMGEIN 385
               E      ++   IN
Sbjct: 348 FCDIEETKSLKAIEKLIN 365


>gi|429849688|gb|ELA25044.1| ATP dependent RNA helicase [Colletotrichum gloeosporioides Nara
           gc5]
          Length = 514

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 197/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FEN  L ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 37  QTEDVTNTKGLEFENFQL-KRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL K I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 96  GKTAAFVIPALEK-INPKVSKIQALILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 153

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 154 GLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A        
Sbjct: 214 LQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 265 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQ 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 322 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 381

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 382 GLAINLI 388


>gi|386312353|ref|YP_006008518.1| DEAD/DEAH box helicase [Shewanella putrefaciens 200]
 gi|319424978|gb|ADV53052.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens 200]
          Length = 635

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 193/358 (53%), Gaps = 24/358 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + + L E G+ K +PIQ A+   ++ G D + Q+++GTGK+  F +  LNK+       P
Sbjct: 17  LLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVTSQ--TTP 74

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+AVQ+ +   S    +KN HV    GG     Q+   KR  Q++VG+PGR
Sbjct: 75  QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQVIVGTPGR 134

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   L +DS++  ++DEAD+++  GF++DI WI    P  +Q+ + SAT      
Sbjct: 135 VMDHMRRGTLKLDSLKALVLDEADEMLKMGFIDDIEWILEHTPSERQLALFSATMPEQIK 194

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV-----DEEKKLVQLLSQ 262
               +++  P+ +R E +   +  ++Q             R+V     ++ + LV++L  
Sbjct: 195 RVANQHLRSPVHVRIESSQTTVESIEQ-------------RFVQVSQHNKLEALVRVLEV 241

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
                 +IF   +     + E L    + +  L G  +Q+AR  ++D  KRGK+ IL+ T
Sbjct: 242 ENTEGVIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDILIAT 301

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           D+AARG+D   +  V+N +IP+DA  Y+HR+GR GR G  G+ I  V++  +    ++
Sbjct: 302 DVAARGLDVERIGHVVNYDIPYDAEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTI 359


>gi|91225696|ref|ZP_01260725.1| ATP-dependent RNA helicase DeaD [Vibrio alginolyticus 12G01]
 gi|269966740|ref|ZP_06180817.1| ATP-dependent RNA helicase DeaD [Vibrio alginolyticus 40B]
 gi|91189585|gb|EAS75860.1| ATP-dependent RNA helicase DeaD [Vibrio alginolyticus 12G01]
 gi|269828663|gb|EEZ82920.1| ATP-dependent RNA helicase DeaD [Vibrio alginolyticus 40B]
          Length = 643

 Score =  200 bits (508), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLNQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVSTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKKIVERFLRDPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|219888343|gb|ACL54546.1| unknown [Zea mays]
          Length = 525

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 195/370 (52%), Gaps = 22/370 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 141 RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 199

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G H+K + V    GGT
Sbjct: 200 GKTAAFCIPALEK-IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGT 257

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R  +PV ++VG+PGRI  + K     ++   + IMDEADKL++  F   I  +
Sbjct: 258 SLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCILNDCSMLIMDEADKLLSPEFQPSIEQL 317

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+  P +I   D    L G+ Q  A        
Sbjct: 318 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELT-LKGITQFYA-------- 368

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 369 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 425

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P ++ TYLHR+GR+GR+G  
Sbjct: 426 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHL 485

Query: 363 GLVITIVSAE 372
           GL + +++ E
Sbjct: 486 GLAVNLITYE 495


>gi|146294196|ref|YP_001184620.1| DEAD/DEAH box helicase [Shewanella putrefaciens CN-32]
 gi|145565886|gb|ABP76821.1| DEAD/DEAH box helicase domain protein [Shewanella putrefaciens
           CN-32]
          Length = 550

 Score =  200 bits (508), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 200/379 (52%), Gaps = 20/379 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK-- 85
           +  PI + + E G+   SPIQ  A P VL G D +  +++GTGK+  F +  L  L K  
Sbjct: 19  LSAPILKAVAEQGYDTPSPIQAQAIPAVLQGQDVMAAAQTGTGKTAGFTLPLLELLSKGQ 78

Query: 86  -LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
                Q +T++L PTRE+A Q+ + V + G ++  L      GG     Q+ + +  V +
Sbjct: 79  KAQAGQVRTLVLTPTRELAAQVAESVETYGKYLP-LRSAVVFGGVPINPQIAKLRHGVDV 137

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +V +PGR+  +   K +  + + + ++DEAD++++ GF+ DI  I + LP  +Q L+ SA
Sbjct: 138 LVATPGRLMDLYNQKAVKFNQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSA 197

Query: 201 TYSHDNLATLQKYMVD-PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           T+S D +  L K +V+ P+ I           VKQ V  + + +  +L        L QL
Sbjct: 198 TFS-DEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKGQKAAL--------LTQL 248

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           + Q  + Q ++FS  +     + +NL  A   A  + G + Q AR  +L  FK G+VR+L
Sbjct: 249 IKQHDWQQVLVFSRTKHGANRLAKNLEEAGIKAAAIHGNKSQTARTKALADFKNGQVRVL 308

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARG+D   +  V+N ++P+    Y+HR+GR GR G  G  +++VS+E +   + 
Sbjct: 309 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEIKLLND 368

Query: 380 LMGEIN--LDHAFNVGLVP 396
           +   IN  LD     G  P
Sbjct: 369 IERLINRILDREVVEGFNP 387


>gi|120597666|ref|YP_962240.1| DEAD/DEAH box helicase [Shewanella sp. W3-18-1]
 gi|120557759|gb|ABM23686.1| DEAD/DEAH box helicase domain protein [Shewanella sp. W3-18-1]
          Length = 550

 Score =  200 bits (508), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 200/379 (52%), Gaps = 20/379 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK-- 85
           +  PI + + E G+   SPIQ  A P VL G D +  +++GTGK+  F +  L  L K  
Sbjct: 19  LSAPILKAVAEQGYDTPSPIQAQAIPAVLQGQDVMAAAQTGTGKTAGFTLPLLELLSKGQ 78

Query: 86  -LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
                Q +T++L PTRE+A Q+ + V + G ++  L      GG     Q+ + +  V +
Sbjct: 79  KAQAGQVRTLVLTPTRELAAQVAESVETYGKYLP-LRSAVVFGGVPINPQIAKLRHGVDV 137

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +V +PGR+  +   K +  + + + ++DEAD++++ GF+ DI  I + LP  +Q L+ SA
Sbjct: 138 LVATPGRLMDLYNQKAVKFNQLEILVLDEADRMLDMGFIRDIRKILAILPKQRQNLMFSA 197

Query: 201 TYSHDNLATLQKYMVD-PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           T+S D +  L K +V+ P+ I           VKQ V  + + +  +L        L QL
Sbjct: 198 TFS-DEIRELAKGLVNNPVEISVTPRNAAATTVKQWVCPVDKGQKSAL--------LTQL 248

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           + Q  + Q ++FS  +     + +NL  A   A  + G + Q AR  +L  FK G+VR+L
Sbjct: 249 IKQHDWQQVLVFSRTKHGANRLAKNLEEAGIKAAAIHGNKSQTARTKALADFKNGQVRVL 308

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARG+D   +  V+N ++P+    Y+HR+GR GR G  G  +++VS+E +   + 
Sbjct: 309 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEIKLLND 368

Query: 380 LMGEIN--LDHAFNVGLVP 396
           +   IN  LD     G  P
Sbjct: 369 IERLINRILDREVVEGFNP 387


>gi|384245739|gb|EIE19232.1| nuclear RNA helicase-like protein Bat1 [Coccomyxa subellipsoidea
           C-169]
          Length = 435

 Score =  200 bits (508), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 135/364 (37%), Positives = 202/364 (55%), Gaps = 28/364 (7%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L +L 
Sbjct: 51  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSVLQQL- 109

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPV- 138
             PV+ +   +I+  TRE+A QI         ++ N+ V  F GG     Q+E+ K    
Sbjct: 110 -EPVENEVAALIICHTRELAYQICHEFERFSTYMPNVRVANFFGGFPIKQQIEQLKTNTP 168

Query: 139 QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI-NTGFVEDITWIYSQLPPMKQMLV 197
             VVG+PGR+KQ+ +   LN+ ++R FI+DE DK++ N     D+  I+ Q P  KQ+++
Sbjct: 169 HAVVGTPGRLKQLSR-SGLNLKTIRHFIIDECDKVLENVDMRGDVQDIFKQTPHDKQVMM 227

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLG--VKQLVALIPECKNPSLRYVDEEKK 255
            SAT S +    ++K+M DP+ I  +D  +  L   V+  + L  E KN         +K
Sbjct: 228 FSATLSAEIRPIIKKFMSDPMEIYVDDEAKLTLHGLVQHYIMLNEEEKN---------RK 278

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L  LL    FNQ VIF    +R + + + L   NF +  +  AQ Q+ RL    +FK G+
Sbjct: 279 LNDLLDALDFNQVVIFVKSVMRAKELNKLLVECNFPSICIHSAQKQEERLKVYKAFKEGQ 338

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIP-------HDAATYLHRMGRAGRYGTRGLVITI 368
            RILV TDL  RGID   V++VIN ++P       + A TYLHR+GRAGR+GT+GL IT 
Sbjct: 339 KRILVATDLVGRGIDIERVNIVINYDMPETDERHGNGADTYLHRVGRAGRFGTKGLAITF 398

Query: 369 VSAE 372
           V++E
Sbjct: 399 VASE 402


>gi|357466255|ref|XP_003603412.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
 gi|355492460|gb|AES73663.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
          Length = 427

 Score =  200 bits (508), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 192/357 (53%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQID 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV-----Q 139
            +P  Q   ++L  TRE+A QI         ++ +L V  F GG  ++  K  +     Q
Sbjct: 110 PVP-GQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPQ 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ +VR F++DE DK++ +    +D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLL--GVKQLVALIPECKNPSLRYVDEEKKL 256
           SAT S +     +K+M DP+ I  +D  +  L   V+  + L  E KN         +KL
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKN---------RKL 279

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   +   L   NF +  +     Q+ RL     FK G  
Sbjct: 280 NDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHS 339

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS  S
Sbjct: 340 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSS 396


>gi|294877852|ref|XP_002768159.1| eukaryotic translation initiation factor, putative [Perkinsus
           marinus ATCC 50983]
 gi|239870356|gb|EER00877.1| eukaryotic translation initiation factor, putative [Perkinsus
           marinus ATCC 50983]
          Length = 395

 Score =  200 bits (508), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 118/366 (32%), Positives = 201/366 (54%), Gaps = 20/366 (5%)

Query: 17  NIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           ++ VL   D L +++ + +G+ + GF + S +Q  A   ++ G D +VQS+SGTGK+ VF
Sbjct: 17  DVQVLDSFDALGLKEDLLRGIYQYGFERPSAVQQRAILPIVKGRDVVVQSQSGTGKTCVF 76

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK 135
            + AL + +K   + PQ +IL+PTRE+A Q   V  ++G ++ N+ V   +GG ++    
Sbjct: 77  ALGAL-QTVKTTERDPQVLILSPTRELAEQSQKVCLALGDYM-NVQVHCCVGGKKLTDDI 134

Query: 136 RP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           R     V IV G+PGR+  MI  ++L+   +++ ++DEAD++++ GF E +  IY  LPP
Sbjct: 135 RALEAGVHIVSGTPGRVYHMISQRHLSTRHLKMLVLDEADEMLDRGFKEQVYDIYRYLPP 194

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
             Q ++VSAT  ++ L     +M +P  +  +     L G+KQ    + +          
Sbjct: 195 STQCVLVSATMPNEILEMTNNFMNNPFRVLVKRDELTLEGIKQFFVAVEK---------- 244

Query: 252 EEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           E+ K   L  L       Q VIF N + + + +   +  A F    + G   QK R A +
Sbjct: 245 EQWKFDTLCDLYDTLTITQAVIFCNTKQKVDWLTNKMREAKFTVVSMHGDMPQKERDAIM 304

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G+ R+L+TTD+  RG+D   V LVI  ++P++   Y+HR+GR+GR+G +G+ I  
Sbjct: 305 QKFRSGQARVLITTDIWGRGLDVQQVSLVICYDLPNNRELYIHRIGRSGRFGRKGVAINF 364

Query: 369 VSAESL 374
           V  + +
Sbjct: 365 VKEDDV 370


>gi|387816925|ref|YP_005677269.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum H04402 065]
 gi|322804966|emb|CBZ02525.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum H04402 065]
          Length = 425

 Score =  200 bits (508), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 200/362 (55%), Gaps = 19/362 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--LPVQQPQTI---ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           L  L K     + P++I   +LAPTRE+A+QI +     G ++ NL      GG     Q
Sbjct: 60  LQNLSKDKKANKNPRSIRALVLAPTRELAIQIGESFECYGKYI-NLKSAVIFGGVSQNPQ 118

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S+LP
Sbjct: 119 TKVLREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
            ++Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  +L   
Sbjct: 179 KIRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRAL--- 235

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +L++
Sbjct: 236 -----LKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNN 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+   
Sbjct: 291 FKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCD 350

Query: 371 AE 372
            E
Sbjct: 351 IE 352


>gi|379012782|ref|YP_005270594.1| putative RNA helicase [Acetobacterium woodii DSM 1030]
 gi|375303571|gb|AFA49705.1| putative RNA helicase [Acetobacterium woodii DSM 1030]
          Length = 551

 Score =  200 bits (508), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 117/348 (33%), Positives = 197/348 (56%), Gaps = 13/348 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I + + +G++E GFV+ + IQ  A P ++ G D I +S++GTGK++ F + A+ KL    
Sbjct: 8   INEQLLRGIEEMGFVEMTEIQEQAIPQLMMGGDLIGKSQTGTGKTVAFAIPAITKL-DPS 66

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQIVVG 143
           +++ Q ++L PTRE+AVQ++D  + V  + K + V    GG    TQ+   K  VQIVVG
Sbjct: 67  IKKVQVLVLCPTRELAVQVSDEFKKVLKYQKGVKVLPIFGGASIETQIRELKSGVQIVVG 126

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   ++ K L +  + + ++DEAD+++N GF EDI  I  ++    Q ++ SAT  
Sbjct: 127 TPGRVMDHMRRKTLKLSDISMVVLDEADEMLNMGFREDIELILDEIAHEIQTVLFSATMP 186

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
              L   + Y  +P+L+         +  K +VA   E K  ++    + + L +LL   
Sbjct: 187 KPILKIAETYQKNPVLVE--------ISPKNMVATSIEQKYFNISDHHKFEALTRLLDVY 238

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              + +IF N +   + I ++L    +  + + G   Q +R+A L  F RG++ ILV TD
Sbjct: 239 KPQRSLIFCNTKKYVDEITDDLKKLGYSVDKIHGDMRQMSRMAVLKQFSRGQLNILVATD 298

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           +AARGID  +VD+V N ++P +   Y+HR+GR GR G  G+ +T+  +
Sbjct: 299 VAARGIDVDDVDIVFNYDVPDNEEYYVHRIGRTGRAGKSGISLTLARS 346


>gi|50303057|ref|XP_451466.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74660682|sp|Q6CX73.1|FAL1_KLULA RecName: Full=ATP-dependent RNA helicase FAL1
 gi|49640597|emb|CAH03054.1| KLLA0A10659p [Kluyveromyces lactis]
          Length = 398

 Score =  200 bits (508), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/356 (34%), Positives = 197/356 (55%), Gaps = 28/356 (7%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L   I    
Sbjct: 31  KPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLLQA-IDSKS 89

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGS 144
           ++ Q ++L+PTRE+A Q   V+ ++G ++ N+      GG  +++  + V    Q+V G+
Sbjct: 90  KELQALVLSPTRELASQSESVISNLGDYL-NVTAHACTGGKALQQDIKKVSKNCQVVSGT 148

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLI--NTGFVEDITWIYSQLPPMKQMLVVSATY 202
           PGR+  MIK + LN+ + ++ ++DEAD+L+    GF + I  I+++LPP  Q++VVSAT 
Sbjct: 149 PGRVLDMIKRQVLNVRNCKILVLDEADELLGETLGFKQQIYDIFTKLPPTIQVVVVSATM 208

Query: 203 SHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------L 256
           S D L   +K+M DP+ I  +     L  +KQ              YVD EK+      L
Sbjct: 209 SKDILEITKKFMSDPVKILVKRDEISLDVIKQ-------------YYVDVEKEEWKFDTL 255

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       QCVIF N + + + +   L   NF    + G   Q+ R   ++ F+ GK 
Sbjct: 256 CDLYDSLTITQCVIFCNTRKKVDWLSRKLTQTNFSVSSMHGDMKQEERDQVMNDFRSGKA 315

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           R+L++TD+ ARGID   + LVIN +IP +   Y+HR+GR+GR+G +G+ I  ++ E
Sbjct: 316 RVLISTDVWARGIDVQQISLVINYDIPDNLENYIHRIGRSGRFGRKGVAINFITKE 371


>gi|338984023|ref|ZP_08633147.1| DEAD/DEAH box helicase domain-containing protein [Acidiphilium sp.
           PM]
 gi|338207051|gb|EGO95064.1| DEAD/DEAH box helicase domain-containing protein [Acidiphilium sp.
           PM]
          Length = 412

 Score =  200 bits (508), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 193/354 (54%), Gaps = 25/354 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI--K 85
           + +PI + L+E G++  +PIQ  A P VL G D +  +++GTGK+  F +  L+ L   +
Sbjct: 26  LSEPILKALEEKGYLNPTPIQEQAIPTVLMGRDVLGCAQTGTGKTASFTLPMLDILSGSR 85

Query: 86  LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK----RPVQIV 141
              + P+++IL PTRE+A+Q+ +     G H+K  H    IGG  +   +    R V ++
Sbjct: 86  ARARMPRSLILEPTRELALQVAENFVQYGKHLKLNHA-LLIGGESMGEQRDVLTRGVDVL 144

Query: 142 VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSAT 201
           + +PGR+  + +   L +  VR+ ++DEAD++++ GF+ DI  I S LP M+Q L  SAT
Sbjct: 145 IATPGRLIDIFERGGLLLSDVRVLVIDEADRMLDMGFIPDIERIVSLLPTMRQTLFFSAT 204

Query: 202 YSHDNLATLQKYMVDPLLIRPEDAT--RPLLGVKQLVALIPECKNPSLRYV---DEEKKL 256
                +A   + + D  L  P+  T  RP        A +       L  V   D+ + L
Sbjct: 205 -----MAPEIRRLADAFLSNPKQITVSRP--------ATVATTITEGLSLVATHDKREAL 251

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            +L+        ++F N +   +++C++L    F A  L G   Q AR A+L+ FK G++
Sbjct: 252 RRLIRTEDVQNALVFCNRKRDVDILCKSLTRHKFSAGMLHGDMPQSARFATLERFKAGEI 311

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           R+LV +D+AARGID   +  V N ++PH A  Y+HR+GR GR G +G  +T+ +
Sbjct: 312 RLLVCSDVAARGIDIGGLSHVFNFDVPHHAEDYVHRIGRTGRAGMQGRALTLAT 365


>gi|403214986|emb|CCK69486.1| hypothetical protein KNAG_0C03820 [Kazachstania naganishii CBS
           8797]
          Length = 513

 Score =  200 bits (508), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 132/388 (34%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DVL      FE D  +++ +  G+ E GF K SPIQ  A P  + G D + ++K+GT
Sbjct: 24  QTDDVLKTKGNTFE-DFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGT 82

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K +K  + + Q +I+ PTRE+A+Q + VVRS+G H   +      GGT
Sbjct: 83  GKTAAFVIPTLEK-VKPKLNKIQALIMVPTRELALQTSQVVRSLGKHC-GVSCMVTTGGT 140

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    + I+VG+PGR+  +   K  ++    LF+MDEADK+++  F   I  I
Sbjct: 141 NLRDDILRLNDTIHILVGTPGRVLDLASRKIADLSECGLFVMDEADKMLSRDFKTIIEQI 200

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
            + LP   Q L+ SAT+       ++K++  P  I   E+ T  L G+ Q  A       
Sbjct: 201 LAFLPKNHQSLLFSATFPLTVKEFMEKHLNKPYEINLMEELT--LKGITQYYA------- 251

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L S+   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 252 ----FVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 307

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 308 QERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 367

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 368 LGLAINLINWNDRFNLYKIEQELGTEIA 395


>gi|212007716|gb|ACJ22452.1| putative eukaryotic translation initiation factor 4A [Pyropia
           yezoensis]
          Length = 408

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 195/354 (55%), Gaps = 14/354 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + + + +G+   GF K S IQ  A   ++   D I Q++SG GK+  F +  L   
Sbjct: 54  DDMNLREELLRGIYAYGFEKPSAIQQRAIMPLIQNRDTIAQAQSGMGKTATFSIGVLQN- 112

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V++ Q +ILAPTRE+A QI  VV+++ +   ++     IGGT+V    R  Q    
Sbjct: 113 IDTSVRKVQALILAPTRELAQQIHKVVQTL-SDFMSISCHACIGGTRVMEDVRVFQSETP 171

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVV 198
            +VVG+PGR+  MI+ + L+  S++ F +DEAD++++ GF E I  I+  +P   Q+ + 
Sbjct: 172 HVVVGTPGRVFDMIQRRALDTGSIKAFCLDEADEMLSRGFKEQIYEIFQFMPATCQVGLF 231

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT   D L   QK+M DP+ I  +     L G+KQ    + E ++  L      + L  
Sbjct: 232 SATMPDDVLEMTQKFMRDPIRILVKKDELTLEGIKQFYVAV-EREDWKL------ETLCD 284

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           L       Q +I++N + + E +   +   +F    L G  DQK R   +  F+ G  R+
Sbjct: 285 LYETLNITQSIIYTNTRRKVEWLVAKMNERDFTVSSLHGDMDQKDRDIIMREFRTGSTRV 344

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           L+TTDL ARGID   V LV+N ++P +   Y+HR+GR+GR+G +G+ I  +++E
Sbjct: 345 LITTDLLARGIDVQQVSLVVNYDLPTNKENYIHRIGRSGRFGRKGVAINFITSE 398


>gi|262372452|ref|ZP_06065731.1| superfamily II DNA and RNA helicase [Acinetobacter junii SH205]
 gi|262312477|gb|EEY93562.1| superfamily II DNA and RNA helicase [Acinetobacter junii SH205]
          Length = 383

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 114/354 (32%), Positives = 201/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PVQ+ 
Sbjct: 14  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLTNPVQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    + +     +LH+   +GG   E+ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAQHL-TKFTDLHLVTLLGGVDFEKQKKMLDRNFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  +S     +Q L+ 
Sbjct: 133 IVATPGRLIDFVEQKEVWLDKIEFLVIDEADRLLDMGFIPSVKRIVRFSPFKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ E K       D+ K L +
Sbjct: 193 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVV-ENK-------DKYKLLQE 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  LD FK+GK  I
Sbjct: 245 ILREEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQGKNNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  VIN  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|147785805|emb|CAN62124.1| hypothetical protein VITISV_037577 [Vitis vinifera]
          Length = 398

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 118/357 (33%), Positives = 195/357 (54%), Gaps = 22/357 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I+  + +G+   GF K S IQ  A   ++ G D I Q++SGTGK+   +   + +++   
Sbjct: 29  IKDDLLRGIYAYGFEKPSAIQQRAVLPIIQGRDVIAQAQSGTGKT-SMIALTVCQMVDTS 87

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            ++ Q +IL+PTRE+A Q   V+ ++G  + N+     IGG  V    R     V IV G
Sbjct: 88  NREVQALILSPTRELASQTEKVILAIGDFI-NIQAHACIGGKSVGEDIRKLEYGVHIVSG 146

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L   +++L ++DE+D++++ GF + I  +Y  LPP  Q++++SAT  
Sbjct: 147 TPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP 206

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
           ++ L    K+M DP+ I  +     L G+KQ    +            EE K   L  L 
Sbjct: 207 NEILEITNKFMTDPVRILVKRDELTLEGIKQFFVAVER----------EEWKFDTLCDLY 256

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + + E + + NF    + G   QK R A +  F+ G  R+L+
Sbjct: 257 DTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERDAIMAEFRSGTTRVLI 316

Query: 321 TTDLAARGID---AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+ ARG+D   A++V LVIN ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 317 TTDVWARGLDVQQASHVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKTDDI 373


>gi|168035593|ref|XP_001770294.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678511|gb|EDQ64969.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 425

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 127/356 (35%), Positives = 192/356 (53%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L + I
Sbjct: 48  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ-I 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
           +    Q   ++L  TRE+A QI         ++ ++ V  F GG  ++  K  ++     
Sbjct: 107 EPVTGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKTHKDLLKNECPH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ SVR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 167 IVVGTPGRILGLARDKDLSLKSVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +++M DP+ I  +D  +  L G+ Q    + E        V++ +KL 
Sbjct: 227 SATLSKEIRPVCKRFMQDPMEIYVDDEAKLTLHGLVQHYIKLGE--------VEKNRKLN 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  R
Sbjct: 279 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT V++ S
Sbjct: 339 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASPS 394


>gi|433545971|ref|ZP_20502309.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
 gi|432182587|gb|ELK40150.1| ATP-dependent RNA helicase [Brevibacillus agri BAB-2500]
          Length = 549

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 121/371 (32%), Positives = 198/371 (53%), Gaps = 25/371 (6%)

Query: 7   KCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSK 66
           KC +  DV   +     +D  + K I Q + + GF + SPIQ A  P VL G D I Q++
Sbjct: 12  KCKKKGDVFMTM----FSDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLAGGDLIGQAQ 67

Query: 67  SGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFI 126
           +GTGK+  F +  + K+   P  + Q I+L PTRE+A+Q+   +  +  + K   +  + 
Sbjct: 68  TGTGKTAAFGIPLVEKIT--PANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTLPIYG 125

Query: 127 G---GTQVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
           G   G Q+   ++ VQIVVG+PGR+   ++ K L +D V   ++DEAD++++ GF+EDI 
Sbjct: 126 GQSIGHQIRALRQGVQIVVGTPGRVMDHLRRKTLKLDHVHTLVLDEADEMLDMGFIEDIE 185

Query: 184 WIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPE 241
            I + +P  +Q L+ SAT   +      +YM  P  + +  E+ T PL+           
Sbjct: 186 TIITHMPEERQTLLFSATMPPEIKRLATRYMKQPQTIAVSREEVTAPLI----------- 234

Query: 242 CKNPSLRYVDEEK--KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQ 299
            +    +  D  K   L ++L        +IF   +   + + E L +  + A+ L G  
Sbjct: 235 -EQVYYKVFDRNKVESLCRILDSEDVELGIIFCRTKRGVDELSEVLQSRGYLADGLHGDL 293

Query: 300 DQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRY 359
            Q  R   +++F+ G +  L+ TD+AARGID  NV  VIN +IP D+ +Y+HR+GR GR 
Sbjct: 294 SQAQRDKVMNAFREGSIEFLIATDVAARGIDVGNVSHVINYDIPQDSESYVHRIGRTGRA 353

Query: 360 GTRGLVITIVS 370
           G +G+ +T+V+
Sbjct: 354 GRKGIAMTLVT 364


>gi|219113561|ref|XP_002186364.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583214|gb|ACI65834.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 370

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 125/357 (35%), Positives = 200/357 (56%), Gaps = 31/357 (8%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF K S IQ  A   ++ G D I QS+SGTGK+ VF V++L +L++   
Sbjct: 4   KPDLLKGIYAYGFEKPSAIQQRAIRPIIRGRDVIAQSQSGTGKTAVFSVSSL-QLLQENS 62

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQIVVG 143
           ++ Q +IL+PTRE+A Q   VV+++G  + N+H    IGG  + +      K  +QI+ G
Sbjct: 63  RECQVLILSPTRELAEQTQKVVQALGDFM-NVHCHACIGGKSLGQDLNALEKGGIQIISG 121

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  +I+   L+ + ++  I+DEAD+++N GF E I  IY  LP   Q++++SAT  
Sbjct: 122 TPGRVFDLIRRNALSPNHLKAMILDEADEMLNRGFKEQIYDIYRFLPASTQVVLMSATLP 181

Query: 204 HDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------ 255
              L   +K+M DP+  L+R ++ T  L G++Q              +++ EK+      
Sbjct: 182 ASVLDMTRKFMNDPIRILVRRDELT--LEGIRQF-------------FINVEKEEWKFDT 226

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L  L       Q VIF N + + + +   + + NF    + G  DQ AR A ++ F+ G 
Sbjct: 227 LCDLYDTLTITQAVIFCNTKQKVDWLAGKMKDKNFTVSAMHGDMDQGARDAVMEEFRSGS 286

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
            R+L+ TDL  RGID   V LVI  ++P +   Y+HR+GR+GR+G +G+ I  V  E
Sbjct: 287 SRVLIATDLWGRGIDVQQVSLVICYDLPTNRELYIHRIGRSGRFGRKGIAINFVREE 343


>gi|124505577|ref|XP_001351530.1| eukaryotic initiation factor, putative [Plasmodium falciparum 3D7]
 gi|23498289|emb|CAD49261.1| eukaryotic initiation factor, putative [Plasmodium falciparum 3D7]
 gi|117956286|gb|ABK58711.1| eIF4A-like protein [Plasmodium falciparum]
          Length = 390

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 207/385 (53%), Gaps = 22/385 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FEN + I++ + +G+   GF K S IQ      +LNG D I+QS+SGTGK+ VF V ALN
Sbjct: 19  FEN-IGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAVGALN 77

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF--IGGTQ----VERPK 135
             +   + + Q IIL+PTRE+A Q   V  ++  ++   HV  +  IGG +    ++   
Sbjct: 78  -CVNRNLNETQVIILSPTRELAEQTQKVCLALADYI---HVTIYCCIGGKKMSDDIKALN 133

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
             V ++ G+PGRI  M+ L++L    ++  ++DEAD+++N GF E +  IY  L P  Q+
Sbjct: 134 NGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQI 193

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           ++ SAT   + L    K+M  P+ I  +     L G+KQ    I   +    +Y    + 
Sbjct: 194 ILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSI---EKEQWKY----ET 246

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L  L       Q V+F N Q++ + + + +  +NF    +     Q  R   +  F++ K
Sbjct: 247 LADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCK 306

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
            R+L++TD+  RG+D   V LV+N ++P+   +Y+HR+GR+GR+G +G+ I  V  + + 
Sbjct: 307 FRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDI- 365

Query: 376 KFHSLMGEINLDHAFNVGLVPDNLT 400
               ++ +I   ++  +  +P N+T
Sbjct: 366 ---KILRDIEQYYSTQIDEMPMNIT 387


>gi|413948693|gb|AFW81342.1| spliceosome RNA helicase BAT1 isoform 1 [Zea mays]
 gi|413948694|gb|AFW81343.1| spliceosome RNA helicase BAT1 isoform 2 [Zea mays]
 gi|413948695|gb|AFW81344.1| spliceosome RNA helicase BAT1 isoform 3 [Zea mays]
          Length = 429

 Score =  199 bits (507), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 193/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV+++L ++ 
Sbjct: 52  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 111

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++  + V  F GG  + + K  ++    
Sbjct: 112 --PVAGQVAALVLCHTRELAYQICHEFERFSKYLTEVKVAVFYGGVHIRKHKDLLKNECP 169

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++ +     D+  I+   P  KQ+++
Sbjct: 170 HIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMM 229

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D A   L G+ Q            L   ++ +KL
Sbjct: 230 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEAEKNRKL 281

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF +  +     Q+ RL    +FK G  
Sbjct: 282 NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPSICIHSGMTQEERLTRYKNFKEGHK 341

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 342 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 398


>gi|29841421|gb|AAP06453.1| similar to NM_019693 HLA-B associated transcript 1 in Homo sapiens
           [Schistosoma japonicum]
          Length = 410

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 121/359 (33%), Positives = 191/359 (53%), Gaps = 15/359 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D +++  + + + + GF   S +Q    P  +   D + Q+KSG GK+ VFV+A L +L 
Sbjct: 47  DFILKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLD 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQ 139
                    ++L  TRE+A QI+        ++  + V  F GG  + +      K PV 
Sbjct: 107 PEGEANTSVLVLCHTRELAFQISKEYERFSKYMPKIKVGVFFGGMPIRKDIETLTKSPVH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +++ K L +  V+ FI+DE DK+++T     D+  I+   P  KQ+++ 
Sbjct: 167 IVVGTPGRILDLVRSKTLKLQHVKHFIIDECDKMLDTLDMRRDVQEIFRMTPHQKQVMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPE-DATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     + +M DPL I  E D+   L G++Q    + E         ++ +KL 
Sbjct: 227 SATMSKEIRPVCRNFMQDPLEIFIENDSKLTLHGLRQHYVKVKEN--------EKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +LL +  FNQ +IF     R   + + L + NF A  +     Q+ RL    +FK  + R
Sbjct: 279 ELLDELQFNQVIIFVKSVQRCMALAQLLVDQNFPAIAMHRNMAQEERLERYQAFKNFQKR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           +LV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT +S E   K
Sbjct: 339 LLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDEQDAK 397


>gi|61679617|pdb|1XTJ|A Chain A, Structure Of Human Uap56 In Complex With Adp
          Length = 386

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 12  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 70

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 71  -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 129

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 130 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 189

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 190 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 241

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 242 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 301

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 302 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 361

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 362 ---ILNDVQDRFEVNISELPDEI 381


>gi|374620507|ref|ZP_09693041.1| DNA/RNA helicase, superfamily II [gamma proteobacterium HIMB55]
 gi|374303734|gb|EHQ57918.1| DNA/RNA helicase, superfamily II [gamma proteobacterium HIMB55]
          Length = 404

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 127/404 (31%), Positives = 209/404 (51%), Gaps = 31/404 (7%)

Query: 15  LSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIV 74
           L++ D+LFE+ + ++  + +G++  GF K SPIQ    PY L+G+DAI ++++GTGK+  
Sbjct: 16  LASEDILFES-LDLDDSLMRGIKGLGFEKCSPIQAKILPYTLDGHDAIGKAQTGTGKTAA 74

Query: 75  FVVAALNKLIKLPVQ------QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG 128
           F++   N L+  PV+      +P+ ++LAPTRE+ +QI D  R +G H   L     IGG
Sbjct: 75  FLITLFNDLLNNPVEGERYLAEPRAVVLAPTRELVMQIADDARELGKHT-GLSTVTLIGG 133

Query: 129 TQVERP-----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
               +       R   IVV +PGR+   I+   + +D V   ++DEAD++++ GF+  + 
Sbjct: 134 ADYAKQLSKVNDRVTDIVVATPGRLIDFIQRGDMFLDRVESLVLDEADRMLDMGFIPQVK 193

Query: 184 WIYSQLPPM--KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPE 241
            I    P    +Q L+ SAT+S D +   +++  DP+ +  E        V Q V L   
Sbjct: 194 RIVRSTPRKEDRQTLLFSATFSQDIMNLARQWTFDPITVEIEPERVATENVDQRVYL--- 250

Query: 242 CKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
                L   D    L ++L++      ++F+N + +   + E L         LSG   Q
Sbjct: 251 -----LESRDRLNVLKRILAEPDATSVIVFANRRDQVRRVYERLQKQGLECGILSGEVAQ 305

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
             R  +L+ FK G++R+L+ TD+A RGI    V  V+N ++P D   Y+HR+GR GR G 
Sbjct: 306 VKRTKTLERFKSGRIRVLIATDVAGRGIHVDGVSHVVNYDLPEDPEDYVHRIGRTGRAGE 365

Query: 362 RGLVITIVSAES---LVKFHSLMGEINLDHAFNVGLVPDNLTGD 402
           +G+ I+  S +    L +  +L+GE           VP+ L  D
Sbjct: 366 KGISISFASEDDAFLLPEIEALLGE-----PLKCSQVPEELLAD 404


>gi|392396642|ref|YP_006433243.1| DNA/RNA helicase [Flexibacter litoralis DSM 6794]
 gi|390527720|gb|AFM03450.1| DNA/RNA helicase, superfamily II [Flexibacter litoralis DSM 6794]
          Length = 617

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 125/363 (34%), Positives = 195/363 (53%), Gaps = 20/363 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +   +++ ++  GF   SPIQ  A P++L G D I Q+++GTGK+  F +  + ++I
Sbjct: 26  DMNLSDEVKRAVEVMGFESPSPIQAEAIPHLLEGKDVIGQAQTGTGKTAAFGIPLIERII 85

Query: 85  KLPVQQ--------PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP-- 134
           K             P+ IIL PTRE+AVQ+   +  +    K++ V    GG  +E+   
Sbjct: 86  KANENSEFDRNSRLPKGIILCPTRELAVQVAGELEKLAKFRKDIFVTAVYGGESIEKQIR 145

Query: 135 --KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
             +R VQIVVG+PGR    IK   L ++ +   I+DEAD+++N GF EDI  I  Q+   
Sbjct: 146 NLRRGVQIVVGTPGRTIDHIKRGTLKLEEITNIILDEADEMLNMGFKEDIELILQQITTE 205

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
            Q ++ SAT     L   +KY   P +++          ++Q  + +P   NP+ +    
Sbjct: 206 HQTVLFSATMPKPILQIAKKYQNSPEIVKVISKELTSDNIEQ--SFLP--INPNYK---- 257

Query: 253 EKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
              LV+LL+   +   +IF N + R + + E L    + AE L G   Q  R   ++ F+
Sbjct: 258 TDVLVRLLAYNGWESMLIFCNTKQRTDEVAETLIQKGYAAEALHGDLAQHQRNLVMNKFR 317

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
            G+V+ILV TD+AARGID  NV+ VIN ++P D   Y+HR+GR GR G +G+ IT +S  
Sbjct: 318 HGRVQILVATDVAARGIDVDNVEAVINYDVPLDPEYYVHRIGRTGRAGNKGVSITFISGR 377

Query: 373 SLV 375
             V
Sbjct: 378 REV 380


>gi|344942485|ref|ZP_08781772.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
           SV96]
 gi|344259772|gb|EGW20044.1| DEAD/DEAH box helicase domain protein [Methylobacter tundripaludum
           SV96]
          Length = 596

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 111/351 (31%), Positives = 192/351 (54%), Gaps = 13/351 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + +P+ + L++ G+   SPIQ    P +L G D + Q+++GTGK+  F +  L++ 
Sbjct: 12  SDLALIEPVLRALKDVGYETPSPIQAQTIPLLLQGKDVLGQAQTGTGKTAAFALPILSR- 70

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQ 139
           I L  + PQ ++LAPTRE+A+Q+ +  +   AH+K  HV    GG    TQ+ + KR   
Sbjct: 71  IDLKQKDPQVLVLAPTRELAIQVAEAFQRYAAHLKGFHVLPIYGGQDYTTQLRQLKRGAH 130

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+   ++   LN+  +   ++DEAD+++  GF++D+ WI  Q+P  +Q+ + S
Sbjct: 131 VVVGTPGRVMDHMRKGTLNLKGLGFLVLDEADEMLRMGFIDDVEWILDQIPEKRQIALFS 190

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT         Q+Y+ +P  I  +  T     ++Q   L+          V +   L ++
Sbjct: 191 ATMPSVIRKIAQQYLNEPEHITIKVTTASAENIRQRYWLVSG--------VHKLDALTRI 242

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L    F+  +IF   +     + E L    + A  ++G   Q  R  ++ + K GK+ IL
Sbjct: 243 LEAETFDGMIIFVRTKTSTVELAEKLEARGYSAAAINGDMSQALRERAIANLKNGKLDIL 302

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           + TD+AARG+D   +  V+N +IP+D  +Y+HR+GR GR G  G  I  ++
Sbjct: 303 IATDVAARGLDVDRITHVVNYDIPYDTESYVHRIGRTGRAGRTGDAILFIA 353


>gi|354557785|ref|ZP_08977043.1| DEAD/DEAH box helicase domain protein [Desulfitobacterium
           metallireducens DSM 15288]
 gi|353550579|gb|EHC20016.1| DEAD/DEAH box helicase domain protein [Desulfitobacterium
           metallireducens DSM 15288]
          Length = 530

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 123/355 (34%), Positives = 197/355 (55%), Gaps = 19/355 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           ++ + K + Q L E GF + SPIQ  A P  L G D I Q+++GTGK+  F +  + K +
Sbjct: 10  EIALSKQVLQSLSEMGFEEPSPIQKEAIPLALEGVDLIGQAQTGTGKTAAFGIPIIEK-V 68

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGA--HVKNLHVDYFIGGTQVERPKRPV---- 138
               Q  Q IIL+PTRE+AVQ+++ +  +G   HVK L +    GG  ++R  R +    
Sbjct: 69  NPKFQAVQAIILSPTRELAVQVSEELAKIGKYRHVKILPI---YGGQSIDRQIRALRFGS 125

Query: 139 QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM-KQMLV 197
           Q+VVG+PGRI   +K   L +  V++ ++DEAD++++ GFVEDI  I  ++PP  +Q+++
Sbjct: 126 QVVVGTPGRILDHLKRGTLKLQYVKMVVLDEADEMLDMGFVEDIEHILKEVPPEDRQVML 185

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
            SAT         Q YM DP   +    +R  L V  +  +  E ++       +   L 
Sbjct: 186 FSATMPLAIRKLAQHYMKDP---KSVAVSRDELTVPLIEQVFYETRDKI-----KVDALC 237

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +++      Q +IF   +   + +  +L    + A+ L G   Q+ R   +  F+ GK+ 
Sbjct: 238 RIIDMEDIGQAIIFCRTKRGVDELVASLEARGYFADALHGDLSQQQRDRVMKRFRDGKIE 297

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           +LV TD+AARG+D  NV  VIN +IP D  +Y+HR+GR GR G +G  IT++S++
Sbjct: 298 LLVATDVAARGLDIDNVTHVINFDIPQDPESYVHRIGRTGRAGRKGQAITLISSK 352


>gi|262274077|ref|ZP_06051889.1| cold-shock DEAD-box protein A [Grimontia hollisae CIP 101886]
 gi|262221887|gb|EEY73200.1| cold-shock DEAD-box protein A [Grimontia hollisae CIP 101886]
          Length = 618

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 114/347 (32%), Positives = 191/347 (55%), Gaps = 13/347 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I   L   GFV  +PIQ A+ P ++ G DA+ ++++GTGK+  F +  LNKL  L  ++P
Sbjct: 17  ILSALDAIGFVSPTPIQAASIPLLMTGVDALGKAQTGTGKTAAFSLPLLNKL-DLGQRKP 75

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGR 147
           Q I++APTRE+A+Q+   ++++G  +  L V    GG  +    R ++    IVVG+PGR
Sbjct: 76  QAIVMAPTRELAIQVAAEMKALGQKIDGLKVLEIYGGASIVDQMRALRAGAHIVVGTPGR 135

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +K +I  + L +D V  F++DEAD+++  GFV+D+TWI  Q P   Q ++ SAT      
Sbjct: 136 VKDLINRERLQLDEVHTFVLDEADEMLKMGFVDDVTWIMEQAPESAQRVLFSATMPPMVK 195

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
             + +++ +P  I    + R +  V+Q   ++        + V++++ + +LL     + 
Sbjct: 196 EIVDRFLREPARIDVAGSNRTVEKVEQQFWVV--------KGVEKDEAMSRLLETEETDA 247

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            ++F   +   E + + L+   F A  L G   Q  R  +++  KRG + ILV TD+ AR
Sbjct: 248 SIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVEHIKRGVIDILVATDVVAR 307

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           G+D   +  V N +IP D  +Y+HR+GR GR G  G  I +V    +
Sbjct: 308 GLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRAGKAILLVRTNQI 354


>gi|226947893|ref|YP_002802984.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A2 str.
           Kyoto]
 gi|226840806|gb|ACO83472.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum A2 str.
           Kyoto]
          Length = 425

 Score =  199 bits (507), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 199/362 (54%), Gaps = 19/362 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPI 59

Query: 80  LNKLIK--LPVQQPQTI---ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           L  L K     + P+TI   +LAPTRE+A+QI +     G ++ NL      GG     Q
Sbjct: 60  LQNLSKDKKVNKNPRTIRALVLAPTRELAIQIGESFECYGKYI-NLKSAVIFGGVSQNPQ 118

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S+LP
Sbjct: 119 TKALREGVDILIATPGRMLDLFNQKYIDLRNIECFVLDEADRMLDMGMIHDVKKIISKLP 178

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
             +Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  SL   
Sbjct: 179 RGRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRSL--- 235

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +L++
Sbjct: 236 -----LKHLLKDESIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNN 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+   
Sbjct: 291 FKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCD 350

Query: 371 AE 372
            E
Sbjct: 351 IE 352


>gi|188996905|ref|YP_001931156.1| DEAD/DEAH box helicase domain-containing protein
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931972|gb|ACD66602.1| DEAD/DEAH box helicase domain protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 405

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 207/354 (58%), Gaps = 20/354 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ + K   + L E G+ K + IQ  A P V+ G D + Q+++GTGK+  F V  + K +
Sbjct: 10  DLNLSKETLKSLDELGYSKPTEIQEKAIPAVMTGKDLVAQAQTGTGKTAAFGVPIVEK-V 68

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQ 139
               ++ Q +IL PTRE+A+Q+   ++ +G + K ++     GG  +        K    
Sbjct: 69  NPKQKKVQALILVPTRELAIQVAKEIKELGKN-KKVYTLAVYGGKSISHQINFLKKGSDV 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +++   LN+D+V++F++DEAD+++  GF++DI  I S LP  +Q L+ S
Sbjct: 128 VVVGTPGRVRDLLERGVLNLDNVKMFVLDEADRMLEMGFIDDIEEIMSYLPEDRQNLLFS 187

Query: 200 ATYSHDNLATLQKYM---VDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           AT   + L   ++++    + + ++P++ T  +  +KQ++  +    NP     D+ KKL
Sbjct: 188 ATMPKEILDLAEEFLNENYETIRVKPDEVT--VEKIKQIIYRV----NPR----DKFKKL 237

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++LSQ    + +IF+  ++  + + E L    F A  + G   QK R   L +F+ GK+
Sbjct: 238 TEVLSQNEAEKVIIFTQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKL 297

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +ILV TD+AARG+D   VDLVIN  +P DA +Y+HR+GR GR G  G  I+I++
Sbjct: 298 KILVATDVAARGLDIKGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMT 351


>gi|402218402|gb|EJT98479.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
          Length = 397

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 135/377 (35%), Positives = 208/377 (55%), Gaps = 27/377 (7%)

Query: 10  RTKDVLSNIDVLFEN-DVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKS 67
           + +++ SN D + +N D +  KP + +G+   GF + S IQ  A   V+ G+D I Q++S
Sbjct: 11  QAEEIESNWDQVVDNFDNMELKPELLRGVYAYGFERPSAIQQRAIVPVIKGHDVIAQAQS 70

Query: 68  GTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG 127
           GTGK+  F ++ L +L  L V+  Q +ILAPTRE+A QI  VV ++G ++ N+     IG
Sbjct: 71  GTGKTATFSISILQRL-DLSVKATQALILAPTRELAQQIQKVVIALGDYM-NIECHACIG 128

Query: 128 GTQVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDIT 183
           GT V     + +  V +VVG+PGR+  MI  + L  D++R+F +DEAD+++  GF E I 
Sbjct: 129 GTNVREDMGKLQEGVHVVVGTPGRVYDMINRRALRTDNIRIFCLDEADEMLARGFREQIY 188

Query: 184 WIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECK 243
            ++  LP   Q++++SAT   D L   +K+M DP+ I  +     L G+KQ         
Sbjct: 189 EVFQLLPQETQVVLLSATMPSDVLEVTKKFMRDPVRILVKRDELTLEGIKQF-------- 240

Query: 244 NPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
                Y+  EK+      L  L       Q VIF N + + + + E L    F    + G
Sbjct: 241 -----YIAVEKEEWKLDTLCDLYETVTITQAVIFCNTRRKVDWLTEQLHKREFTVSAMHG 295

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
             +QK R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR G
Sbjct: 296 DMEQKQREVLMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 355

Query: 358 RYGTRGLVITIVSAESL 374
           R+G +G+ I  V+ E +
Sbjct: 356 RFGRKGVAINFVTTEDV 372


>gi|320583801|gb|EFW98014.1| eukaryotic translation initiation factor eIF-4A subunit, putative
           [Ogataea parapolymorpha DL-1]
          Length = 396

 Score =  199 bits (507), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 194/357 (54%), Gaps = 25/357 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF   S IQ  A   V+ G D I Q++SGTGK+  F +  L +++   
Sbjct: 30  LKESLLKGIYAYGFEAPSAIQSRAIAQVIQGRDVIAQAQSGTGKTATFTIGML-QVVDTS 88

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
             + Q ++L+ TRE+A QI  V+ ++G ++K +     +GG  V    R +     IV G
Sbjct: 89  KFETQALVLSTTRELAAQIRSVISALGDYMK-IRCHACVGGKSVGEDIRALSKGQHIVSG 147

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MIK + L++ +V++ ++DEAD+L+  GF + I+ IY  LPP  Q++VVSAT  
Sbjct: 148 TPGRVLDMIKRRTLSIRNVKMLVLDEADELLGKGFQDQISEIYQYLPPSTQVVVVSATLP 207

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LV 257
              L+   K+M DP+ I  +     L G+ Q              Y+  EK+      L 
Sbjct: 208 KAVLSLTNKFMSDPVKILVKRDELTLEGINQ-------------YYIQVEKEDWKFDTLC 254

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + E+L  ANF    + G   Q  R   +D F+ G  R
Sbjct: 255 DLYDSLTITQAVIFCNTKKKVDWLSESLRKANFTVSSMHGDMQQDERDRVMDEFRLGNSR 314

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           +L++TD+ ARGID   V LVIN ++P+D   Y+HR+GR+GR+G +G+ I  V+   L
Sbjct: 315 VLISTDIWARGIDVQQVSLVINYDLPYDKENYVHRIGRSGRFGRKGVAINFVTRNEL 371


>gi|50290013|ref|XP_447438.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74661246|sp|Q6FQQ6.1|IF4A_CANGA RecName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=Translation initiation factor 1
 gi|49526748|emb|CAG60375.1| unnamed protein product [Candida glabrata]
          Length = 396

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 126/344 (36%), Positives = 198/344 (57%), Gaps = 14/344 (4%)

Query: 16  SNID-VLFE-NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSI 73
           +N D V++E +D+ + + + +G+   GF K S IQ  A   ++ G D + Q++SGTGK+ 
Sbjct: 16  TNYDKVVYEFDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTG 75

Query: 74  VFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ-VE 132
            F +AAL + I   ++ PQ ++LAPTRE+A+QI  VV ++G H+ ++ V   IGGT  VE
Sbjct: 76  TFSIAALQR-IDPAIKAPQALMLAPTRELALQIQKVVMALGFHM-DIKVHACIGGTSFVE 133

Query: 133 RPK--RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
             +  R  QIVVG+PGR+   I+ +   +D++++FI+DEAD++++TGF E I  I++ LP
Sbjct: 134 DAEGLRDAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLP 193

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
           P  Q++++SAT   D L    K+M +P+ I  +     L G+KQ    + E      +Y 
Sbjct: 194 PTTQVVLLSATMPRDVLEVTAKFMQNPVRILVKKDELTLEGIKQFYVNVEE---EQFKY- 249

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  L       Q VIF N + + E + + L   NF    +     Q+ R   +  
Sbjct: 250 ---DCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKE 306

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           F+ G  RIL++TDL ARGID   V LVIN ++P +   Y+HR+G
Sbjct: 307 FRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIG 350


>gi|143456603|sp|Q0JM17.2|RH56_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 56
 gi|57899406|dbj|BAD88053.1| putative HLA-B associated transcript 1 [Oryza sativa Japonica
           Group]
 gi|215695226|dbj|BAG90417.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258618301|gb|ACV83946.1| DExD box helicase protein HLA-B associated transcript 1 [Oryza
           sativa Japonica Group]
          Length = 432

 Score =  199 bits (507), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 195/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV+++L ++ 
Sbjct: 55  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 114

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++  + V  F GG  +++ K  ++    
Sbjct: 115 --PVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP 172

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++++     D+  I+   P  KQ+++
Sbjct: 173 HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 232

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D A   L G+ Q            L   ++ +KL
Sbjct: 233 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEAEKNRKL 284

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL    +FK G  
Sbjct: 285 NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHK 344

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A +YLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 345 RILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSAS 401


>gi|406946236|gb|EKD77505.1| hypothetical protein ACD_42C00315G0003 [uncultured bacterium]
          Length = 503

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 119/359 (33%), Positives = 193/359 (53%), Gaps = 13/359 (3%)

Query: 15  LSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIV 74
           LSN   LF   + +EK I   L + G+   +PIQ    P +LNG D + Q+K+GTGK+  
Sbjct: 17  LSNNISLFSR-LGLEKEILSALSDLGYEGATPIQEQGIPILLNGQDLLAQAKTGTGKTAT 75

Query: 75  FVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQ 130
           F +  L++L    ++ PQ +IL PTRE+A+Q+ +  +S   HV+   V    GG    +Q
Sbjct: 76  FALPILSRL-NHELRAPQALILVPTRELAIQVAEAFQSYAKHVRGFSVTPIYGGQDFGSQ 134

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
           +   KR  Q++VG+PGR+   ++ K ++++++++ ++DEAD+++  GF++D+ WI  QL 
Sbjct: 135 LRSLKRGSQVIVGTPGRLMDHMRRKTISLNALKMVVLDEADEMLKMGFIDDVEWILGQLT 194

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
              Q  + SAT S       Q+Y+ D   I  +  T  +   +Q       C    +   
Sbjct: 195 LPHQTALFSATLSASIQKIAQRYLKDAHKIHIKSHTNTVEATEQ-------CYVTVMNRH 247

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
            + + L + L        +IF+  +     + E L    + A  L+G   Q AR  +++ 
Sbjct: 248 QKLEVLTRFLETEENQAVIIFTRTKTESMELAEKLQARGYNAAALNGDMSQAAREKTINR 307

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            K+G++ IL+ TD+AARGID   V  VIN +IPHD  +Y+HR+GR GR G  G  I  V
Sbjct: 308 LKKGELDILIATDVAARGIDVERVSHVINYDIPHDVDSYVHRIGRTGRAGRAGKAILFV 366


>gi|222618647|gb|EEE54779.1| hypothetical protein OsJ_02176 [Oryza sativa Japonica Group]
          Length = 429

 Score =  199 bits (507), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 195/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV+++L ++ 
Sbjct: 52  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 111

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++  + V  F GG  +++ K  ++    
Sbjct: 112 --PVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP 169

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++++     D+  I+   P  KQ+++
Sbjct: 170 HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 229

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D A   L G+ Q            L   ++ +KL
Sbjct: 230 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEAEKNRKL 281

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL    +FK G  
Sbjct: 282 NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHK 341

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A +YLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 342 RILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSAS 398


>gi|323349512|gb|EGA83736.1| Fal1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|365766533|gb|EHN08029.1| Fal1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 399

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 126/377 (33%), Positives = 204/377 (54%), Gaps = 28/377 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L + I L  +  Q 
Sbjct: 36  RGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL-QAIDLRKKDLQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE-----RPKRPVQIVVGSPGRI 148
           +IL+PTRE+A QI  VV+++G ++ N++     GG  ++       K   Q V G+PGR+
Sbjct: 95  LILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L   +V++ ++DEAD+L++   GF + I  I+++LP   Q++VVSAT + D 
Sbjct: 154 LDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K+M DP+ I  +     L G+KQ V             VD+E+     L  +   
Sbjct: 214 LEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKEEWKFDTLCDIYDS 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + + + L  +NF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++   L K      
Sbjct: 323 DVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLR---- 378

Query: 383 EINLDHAFNVGLVPDNL 399
           EI   ++  +  +P N 
Sbjct: 379 EIEKFYSIKINPMPANF 395


>gi|171687533|ref|XP_001908707.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943728|emb|CAP69380.1| unnamed protein product [Podospora anserina S mat+]
          Length = 396

 Score =  199 bits (507), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 212/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
           I   ++Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +    Q
Sbjct: 85  IDTSLKQCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALGEGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  DS+++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|367006737|ref|XP_003688099.1| hypothetical protein TPHA_0M00900 [Tetrapisispora phaffii CBS 4417]
 gi|357526406|emb|CCE65665.1| hypothetical protein TPHA_0M00900 [Tetrapisispora phaffii CBS 4417]
          Length = 400

 Score =  199 bits (506), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 128/380 (33%), Positives = 205/380 (53%), Gaps = 32/380 (8%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++I L  +  Q 
Sbjct: 37  KGVYLYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGML-QVIDLKRKDLQA 95

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP-----KRPVQIVVGSPGRI 148
           +IL+PTRE+A QI  VV ++G ++ N+      GG  ++       K   Q+V G+PGR+
Sbjct: 96  LILSPTRELATQINQVVTNLGDYM-NVQSYAMTGGKTMKDDLKKMNKSGCQVVSGTPGRV 154

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLI--NTGFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + ++  +V++ I+DEAD+L+  + GF + I  I+++LP   Q++VVSAT S D 
Sbjct: 155 LDMIKRQLISTRNVQMLILDEADELLGEHLGFKQQIYEIFAKLPSACQVVVVSATMSKDI 214

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLL 260
           +   +K+M DP  I  +     L G+KQ              YV+  K+      L  L 
Sbjct: 215 IEVTKKFMSDPTKILVKRDEISLEGIKQF-------------YVNVSKEDWKFDTLCDLY 261

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 QCVIF N + + + + + L  +NF    + G   Q+ R   ++ F+ G  R+L+
Sbjct: 262 DSLTITQCVIFCNTKKKVDWLSQKLTRSNFSVIAMHGDMKQEDRDKVMNDFRTGTSRVLI 321

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           +TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ E      S 
Sbjct: 322 STDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFGRKGVSINFVTDED----SSK 377

Query: 381 MGEINLDHAFNVGLVPDNLT 400
             EI   +   +  VP +L+
Sbjct: 378 QKEIERHYKIKIKPVPADLS 397


>gi|156848475|ref|XP_001647119.1| hypothetical protein Kpol_1036p3 [Vanderwaltozyma polyspora DSM
           70294]
 gi|160385736|sp|A7TEF4.1|FAL1_VANPO RecName: Full=ATP-dependent RNA helicase FAL1
 gi|156117803|gb|EDO19261.1| hypothetical protein Kpol_1036p3 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 399

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/382 (34%), Positives = 203/382 (53%), Gaps = 32/382 (8%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L   I L  +  
Sbjct: 34  LLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQA-IDLKRKDL 92

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE-----RPKRPVQIVVGSPG 146
           Q ++L+PTRE+A QI  VV ++G ++ N+      GG  ++       K   Q+V G+PG
Sbjct: 93  QALVLSPTRELASQINQVVSNLGDYM-NVQSYAMTGGKTMKDDLNRMQKNGCQVVSGTPG 151

Query: 147 RIKQMIKLKYLNMDSVRLFIMDEADKLI--NTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           R+  M K   LN  +V++ I+DEAD+L+  + GF + I  I+++LP   Q++VVSAT S 
Sbjct: 152 RVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIFTKLPAACQVVVVSATMSK 211

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQ 258
           D L   +K+M DP+ I  +     L G+KQ              YV+ EK+      L  
Sbjct: 212 DILEVTKKFMSDPVKILVKRDEISLEGIKQ-------------YYVNVEKEDWKFDTLCD 258

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           L       QCVIF N + + + +   L  +NF    + G   Q+ R   +  F+ G  R+
Sbjct: 259 LYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEDRNKVMSDFRSGHSRV 318

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFH 378
           L++TD+ ARGID   V LVIN +IP     Y+HR+GR+GR+G +G+ I  +++  L K  
Sbjct: 319 LISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIGRSGRFGRKGVAINFITSSDLSK-- 376

Query: 379 SLMGEINLDHAFNVGLVPDNLT 400
             M EI   +   +  VP +L+
Sbjct: 377 --MKEIEKYYRIKISPVPADLS 396


>gi|283457475|ref|YP_003362053.1| superfamily II DNA and RNA helicase [Rothia mucilaginosa DY-18]
 gi|283133468|dbj|BAI64233.1| superfamily II DNA and RNA helicase [Rothia mucilaginosa DY-18]
          Length = 732

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 193/361 (53%), Gaps = 27/361 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
            D+ ++  +   L+E G+ K SPIQ    P +L G+D +  +++GTGK+  F + AL+++
Sbjct: 64  TDLGLDARVLAALEEVGYEKPSPIQEQTIPLLLEGHDVVGLAQTGTGKTAAFALPALSRM 123

Query: 84  IKLP-----VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERP 134
            +L       +  Q ++LAPTRE+A+Q+ +   S   H+++  V    GG+    Q+   
Sbjct: 124 AELADINGVSRDTQVLVLAPTRELALQVAEAFSSYATHMEDFTVLPIYGGSPYGPQLAGL 183

Query: 135 KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
           +R  Q+VVG+PGR+   ++   L++ +++  ++DEAD+++  GF ED+  I    P  KQ
Sbjct: 184 RRGAQVVVGTPGRVIDHLEKGSLDLSNLQYLVLDEADEMLRMGFAEDVEKILEGTPDSKQ 243

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD--- 251
           + + SAT  +      Q+Y+ DP  +R +  T                 N S RY+    
Sbjct: 244 VALFSATMPNSIRKIAQQYLNDPREVRVKAKT-------------TTSSNISQRYMQVMH 290

Query: 252 --EEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLD 309
             +   + ++L    ++  ++F   +   E + + L    F A  ++G   Q+ R  ++D
Sbjct: 291 SHKLDAMTRVLEVENYDGIIVFVRTKKETEEVADKLKARGFAAAAINGDIPQQLRERTVD 350

Query: 310 SFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           + + G++ ILV TD+AARG+D   + LV+N +IPHD  +Y+HR+GR GR G  G  I  V
Sbjct: 351 ALRDGRIDILVATDVAARGLDVERISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILFV 410

Query: 370 S 370
           +
Sbjct: 411 T 411


>gi|386287044|ref|ZP_10064223.1| Cold-shock DEAD box protein A-like protein [gamma proteobacterium
           BDW918]
 gi|385279960|gb|EIF43893.1| Cold-shock DEAD box protein A-like protein [gamma proteobacterium
           BDW918]
          Length = 644

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 131/470 (27%), Positives = 241/470 (51%), Gaps = 38/470 (8%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           D  +  D +  +D+ +   I   ++  G+   SPIQ A  P +L G D + Q+++GTGK+
Sbjct: 38  DTPAAADTITFDDLGLAPLILAAVKAVGYEIPSPIQAATIPLILAGRDVVGQAQTGTGKT 97

Query: 73  IVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT--- 129
             F +  L++L  +  ++ Q +ILAPTRE+A+Q+ + ++S  + +   +V    GG    
Sbjct: 98  AAFALPLLSRL-DVNSRRTQALILAPTRELAIQVAEALQSYASQLPGFNVLPIYGGQDYR 156

Query: 130 -QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
            Q+   KR VQ+VVG+PGR+   ++   L +D +   ++DEAD+++  GF++D+ W+ SQ
Sbjct: 157 GQLAALKRGVQVVVGTPGRVMDHMRRGTLKLDDLTHLVLDEADEMLRMGFIDDVEWVMSQ 216

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           +P  +Q+ + SAT           Y+ +P  +  +  T   + ++Q   +         R
Sbjct: 217 MPAKRQIALFSATMPSAIRRIATTYLTNPEQVTIQTKTSTAITIRQRYWMA--------R 268

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
            +++   L ++L   PF+  +IF   +L    + E L    + A  L+G   Q  R  ++
Sbjct: 269 GLNKLDALTRILEAEPFDGMIIFVRTKLVTTELAEKLQARGYAAAALNGDIAQAQRERTV 328

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
           +  K G++ I++ TD+AARG+D   +  VIN +IPHD   Y+HR+GR GR G  G  I  
Sbjct: 329 EQLKNGRLDIVIATDVAARGLDVERISHVINYDIPHDTEAYVHRIGRTGRAGRSGDAILF 388

Query: 369 VSAESLVKFHSL-------MGEINLDHAFNVGL---------VPDNLTGDQINWTQR-VQ 411
           V+        ++       + E+ L  A N+           + D L G  +++ ++ +Q
Sbjct: 389 VAPREKRMLQAIERATRQSIEEMGLPSAENINALRVDRFMQKITDTLAGTDLSFFRKMLQ 448

Query: 412 TLLAKPLDQAQEREDVEQTAEESSKVENTKPL--RGAPSKEVTKKGASKE 459
             +AK      +  +++  A  +S+++  KPL  + AP K +T +  S++
Sbjct: 449 EYVAK-----HDVSEIDVAAALASQLQGDKPLLVKDAP-KMMTDRPQSRD 492


>gi|117919262|ref|YP_868454.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
 gi|117611594|gb|ABK47048.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
          Length = 578

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 195/353 (55%), Gaps = 18/353 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK-- 85
           +  PI++ + E G+   SPIQ  A P VL G D +  +++GTGK+  F +  L  L K  
Sbjct: 8   LSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGN 67

Query: 86  -LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
                Q + ++L PTRE+A Q+++ V + G ++  L      GG     Q+++ +  V +
Sbjct: 68  KAKAGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLRHGVDV 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +V +PGR+  + + K +  + + + ++DEAD++++ GF+ DI  I + LP  +Q L+ SA
Sbjct: 127 LVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMFSA 186

Query: 201 TYSHDNLATLQKYMVD-PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           T+S D +  L K +V+ P+ I           VKQ +  + + +  +L        L+QL
Sbjct: 187 TFS-DEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSAL--------LIQL 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           + Q  + Q ++FS  +     + ++L  A   A  + G + Q AR  +L  FK G+VR+L
Sbjct: 238 IKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           V TD+AARG+D   +  V+N ++P+    Y+HR+GR GR G  G  +++VS+E
Sbjct: 298 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSE 350


>gi|424030057|ref|ZP_17769555.1| cold-shock DEAD box protein A [Vibrio cholerae HENC-01]
 gi|408883063|gb|EKM21857.1| cold-shock DEAD box protein A [Vibrio cholerae HENC-01]
          Length = 643

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 117/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLDQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVSTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ I        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLRDPVTIDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|126654509|ref|XP_001388425.1| ATP-dependent RNA helicase [Cryptosporidium parvum Iowa II]
 gi|126117365|gb|EAZ51465.1| ATP-dependent RNA helicase, putative [Cryptosporidium parvum Iowa
           II]
          Length = 406

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 129/382 (33%), Positives = 196/382 (51%), Gaps = 22/382 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DV       FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 23  KTDDVTKTKGSDFE-DYFLKRELLMGIYEKGFERPSPIQEESIPVALAGKDILARAKNGT 81

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K I       Q +IL PTRE+A+Q + +V+ +G H+ N+      GGT
Sbjct: 82  GKTAAFVIPLLEK-INTKKNIIQGLILVPTRELALQTSSIVKQLGKHI-NVQCMVSTGGT 139

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R   PV ++VG+PGRI  +   K  N+    +FIMDEADKL++  F   I  +
Sbjct: 140 SLRDDILRLNNPVHVLVGTPGRILDLSNKKVCNLSGCFMFIMDEADKLLSPEFQPIIEEL 199

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+ +   I   D    L GV Q  A        
Sbjct: 200 IEFLPKERQILLYSATFPVTVKGFKDKYLANAHEINLMDEL-TLKGVTQYYA-------- 250

Query: 246 SLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +        Y+     Q 
Sbjct: 251 ---FVEEKQKLHCLNTLFSKLQINQAIIFCNSVTRVELLAKKITELGSSCFYIHARMLQS 307

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV++DL  RGID  +V++VIN + P  + TYLHR+GR+GR+G  
Sbjct: 308 HRNRVFHDFRNGACRCLVSSDLITRGIDIQSVNVVINFDFPKYSETYLHRIGRSGRFGHL 367

Query: 363 GLVITIVSAESLVKFHSLMGEI 384
           GL I +++ E     + +  E+
Sbjct: 368 GLAINLITYEDRYNLYRIEKEL 389


>gi|115437444|ref|NP_001043297.1| Os01g0549700 [Oryza sativa Japonica Group]
 gi|113532828|dbj|BAF05211.1| Os01g0549700, partial [Oryza sativa Japonica Group]
          Length = 495

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 195/357 (54%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV+++L ++ 
Sbjct: 118 DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 177

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++  + V  F GG  +++ K  ++    
Sbjct: 178 --PVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP 235

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++++     D+  I+   P  KQ+++
Sbjct: 236 HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 295

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D A   L G+ Q            L   ++ +KL
Sbjct: 296 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEAEKNRKL 347

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL    +FK G  
Sbjct: 348 NDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHK 407

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A +YLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 408 RILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSAS 464


>gi|449017021|dbj|BAM80423.1| eukaryotic translation initiation factor eIF-4A [Cyanidioschyzon
           merolae strain 10D]
          Length = 417

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 213/385 (55%), Gaps = 26/385 (6%)

Query: 2   AHDIQKCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGY 59
           A  ++      ++ SN+  ++E  +D+ +   + +G+   GF K S IQ      ++ G 
Sbjct: 22  AEHVENVESAGEIDSNVTEVYESFDDMGLRDELLRGIYAYGFEKPSAIQQRGIVPMVKGR 81

Query: 60  DAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKN 119
           D + QS+SGTGK+  FV+  L   +   V++ Q +ILAPTRE+A QI  V  ++G ++  
Sbjct: 82  DMLAQSQSGTGKTGCFVIGMLQN-VDTSVRKVQGLILAPTRELAQQIQKVALALGDYM-G 139

Query: 120 LHVDYFIGGTQVERPKRPVQ-----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI 174
           + V   IGGT+V    R ++     ++VG+PGR+  MI+ + L+  +++ F+MDEAD+++
Sbjct: 140 VKVHACIGGTRVVDDLRTLEQDTPHVIVGTPGRVYDMIQRRALDTTTIKCFVMDEADEML 199

Query: 175 NTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGV 232
           + GF E I  ++  +P   Q+ + SAT   + +   +K++ DP  +L+R ++ T  L G+
Sbjct: 200 SRGFKEQIYMVFQYMPANCQVALFSATIPAEIVEMAEKFLRDPARILVRKDELT--LQGI 257

Query: 233 KQLVALIPECKNPSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANAN 289
           +Q   ++ +          EE KL   + L      +Q VIF N + + E + E +   +
Sbjct: 258 RQFYIMVEK----------EEWKLETLIDLYETISASQTVIFVNSRRKAEWLSERMRERD 307

Query: 290 FGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATY 349
           F    +     Q+ R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y
Sbjct: 308 FTVSVIHADMSQEERNLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENY 367

Query: 350 LHRMGRAGRYGTRGLVITIVSAESL 374
           +HR+GR+GR+G +G+ I  ++ E +
Sbjct: 368 IHRVGRSGRFGRKGVAINFLANEDV 392


>gi|323305584|gb|EGA59325.1| Fal1p [Saccharomyces cerevisiae FostersB]
          Length = 408

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 127/390 (32%), Positives = 208/390 (53%), Gaps = 28/390 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L + I L  +  Q 
Sbjct: 36  RGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL-QAIDLRKKDLQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE-----RPKRPVQIVVGSPGRI 148
           +IL+PTRE+A QI  VV+++G ++ N++     GG  ++       K   Q V G+PGR+
Sbjct: 95  LILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L   +V++ ++DEAD+L++   GF + I  I+++LP   Q++VVSAT + D 
Sbjct: 154 LDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K+M DP+ I  +     L G+KQ V             VD+E+     L  +   
Sbjct: 214 LEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKEEWKFDTLCDIYDS 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + + + L  +NF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+  RGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++   L K      
Sbjct: 323 DVWXRGIDVQQVSLVINYDLPEIIEXYIHRIGRSGRFGRKGVAINFITKADLAKLR---- 378

Query: 383 EINLDHAFNVGLVPDNLTGDQINWTQRVQT 412
           EI   ++  +  +P N     I + + + T
Sbjct: 379 EIEKFYSIKINPMPANFCRIIIKYREHIPT 408


>gi|294936207|ref|XP_002781657.1| eukaryotic translation initiation factor, putative [Perkinsus
           marinus ATCC 50983]
 gi|239892579|gb|EER13452.1| eukaryotic translation initiation factor, putative [Perkinsus
           marinus ATCC 50983]
          Length = 395

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 118/366 (32%), Positives = 201/366 (54%), Gaps = 20/366 (5%)

Query: 17  NIDVLFENDVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           ++ VL   D L +++ + +G+ + GF + S +Q  A   ++ G D +VQS+SGTGK+ VF
Sbjct: 17  DVQVLDSFDALGLKEDLLRGIYQYGFERPSAVQQRAILPIVKGRDVVVQSQSGTGKTCVF 76

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK 135
            + AL + +K   + PQ +IL+PTRE+A Q   V  ++G ++ N+ V   +GG ++    
Sbjct: 77  ALGAL-QTVKPTERDPQVLILSPTRELAEQSQKVCLALGDYM-NVQVHCCVGGKKLTDDI 134

Query: 136 RP----VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           R     V IV G+PGR+  MI  ++L+   +++ ++DEAD++++ GF E +  IY  LPP
Sbjct: 135 RALEAGVHIVSGTPGRVYHMISQRHLSTRHLKMLVLDEADEMLDRGFKEQVYDIYRYLPP 194

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
             Q ++VSAT  ++ L     +M +P  +  +     L G+KQ    + +          
Sbjct: 195 STQCVLVSATMPNEILEMTNNFMNNPFRVLVKRDELTLEGIKQFFVAVEK---------- 244

Query: 252 EEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           E+ K   L  L       Q VIF N + + + +   +  A F    + G   QK R A +
Sbjct: 245 EQWKFDTLCDLYDTLTITQAVIFCNTKQKVDWLTNKMREAKFTVVSMHGDMPQKERDAIM 304

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G+ R+L+TTD+  RG+D   V LVI  ++P++   Y+HR+GR+GR+G +G+ I  
Sbjct: 305 QKFRSGQARVLITTDIWGRGLDVQQVSLVICYDLPNNRELYIHRIGRSGRFGRKGVAINF 364

Query: 369 VSAESL 374
           V  + +
Sbjct: 365 VKEDDV 370


>gi|88603077|ref|YP_503255.1| DEAD/DEAH box helicase-like protein [Methanospirillum hungatei
           JF-1]
 gi|88188539|gb|ABD41536.1| DEAD/DEAH box helicase-like protein [Methanospirillum hungatei
           JF-1]
          Length = 531

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 195/351 (55%), Gaps = 13/351 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I + +++ G+ + +PIQ    P +L G D   Q+ +GTGK+  F + A+ +L
Sbjct: 7   SDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAI-EL 65

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQ 139
            +   +  QTI+L P+RE+AVQ+   +  +  H K + +    GG  +ER      R VQ
Sbjct: 66  CQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQIKALSRGVQ 125

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           I++G+PGR+   IK K L +D+V L ++DEAD++++ GF EDI  I S +P  +Q +++S
Sbjct: 126 IIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFREDIEEILSHIPKERQTVILS 185

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT+  + L   +++  +P+ ++        L V Q+     E + P+     +   L+++
Sbjct: 186 ATFPPEILDISRRFQKNPIDVK---MVHQELTVPQIEQYYIEVREPA-----KADTLIRV 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L      + +IF N Q+  + +   L    F A+ L G   Q  R   +++F++G++ IL
Sbjct: 238 LEFYQPQRTIIFCNTQIAVDAVSSALKAEGFLADGLHGGMAQAQRDKVMNAFRKGQLEIL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           + TD+AARGID   +DLV N + P D   Y+HR+GR  R G  G  I+ VS
Sbjct: 298 IATDVAARGIDVEEIDLVCNFDFPQDDEYYVHRIGRTARAGRTGRAISFVS 348


>gi|86145756|ref|ZP_01064085.1| ATP-dependent RNA helicase DeaD [Vibrio sp. MED222]
 gi|85836455|gb|EAQ54584.1| ATP-dependent RNA helicase DeaD [Vibrio sp. MED222]
          Length = 665

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 121/355 (34%), Positives = 195/355 (54%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ + + I   L   GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNK 
Sbjct: 9   NELALNENILSALDSMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAFSLPLLNK- 67

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I L   +PQ II+APTRE+A+Q+   ++++G  +K L V    GG     Q+    R   
Sbjct: 68  INLNQHKPQAIIMAPTRELAIQVAAEIKNLGRDIKGLKVLEIYGGASIVDQMRALSRGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K ++    L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLLTRDRLHLDEAHTFVLDEADEMLKMGFVDDVTWILEQAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +  + K +VD  L  P  A   + G    V  + +     ++ V++++ + +L
Sbjct: 188 AT-----MPPMVKTIVDRYLRNP--AKVDVAGTNHTVDKVAQ-NYWVVKGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|171057308|ref|YP_001789657.1| DEAD/DEAH box helicase [Leptothrix cholodnii SP-6]
 gi|170774753|gb|ACB32892.1| DEAD/DEAH box helicase domain protein [Leptothrix cholodnii SP-6]
          Length = 479

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 116/354 (32%), Positives = 197/354 (55%), Gaps = 20/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK-- 85
           ++  + + + + G++  +PIQ  A P VL+G D +  +++GTGK+  F +  L K+++  
Sbjct: 22  LDPKLLRAIVDAGYLTMTPIQAKAIPIVLDGRDVMGAAQTGTGKTAAFSLPLLQKMLRHE 81

Query: 86  ----LPVQQP-QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKR 136
                P + P + ++LAPTRE+A Q+ + V++   H   L V    GG     Q    KR
Sbjct: 82  NASASPARHPVRALVLAPTRELADQVANNVKTYARH-SQLRVTCVFGGIDMAPQTAELKR 140

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            V++++ +PGR+   I+ K   ++ V   ++DEAD++++ GF+ D+  I S LP  +Q L
Sbjct: 141 GVEVLIATPGRLLDHIQAKNCQLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPKTRQTL 200

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT+S +     Q Y+ DPLL+   +  RP        A   E +  S+   D+ + +
Sbjct: 201 LFSATFSPEIKKLAQSYLQDPLLV---EVARP-----NATATNVEQRFYSVTDDDKRRTV 252

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
           + +L +    Q ++F N +L    +  +          L G + Q  RL +LD+FKRG+V
Sbjct: 253 LHILRERSITQAIVFVNSKLGAARLARSFERDGLRTSALHGDKSQDERLKALDAFKRGEV 312

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +LV TD+AARG+D A++  V N +IP +A  Y+HR+GR GR G  GL +++VS
Sbjct: 313 DVLVATDVAARGLDIADLPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSLVS 366


>gi|384493411|gb|EIE83902.1| ATP-dependent RNA helicase DHH1 [Rhizopus delemar RA 99-880]
          Length = 523

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 194/370 (52%), Gaps = 22/370 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +     FE D  +++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 27  QTEDVTATKGNEFE-DYFLKRELLMGIFEAGFEKPSPIQEEAIPLALAGRDILARAKNGT 85

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++  L K I   + + Q +IL PTRE+A+Q + V +++G H+ N+ V    GGT
Sbjct: 86  GKTAAFIIPTLEK-INNSLSKIQALILVPTRELALQTSQVCKTLGKHL-NIQVMVTTGGT 143

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV +VVG+PGRI  +      +  +   F+MDEADKL++  F   I  +
Sbjct: 144 TLKDDIMRLSEPVHVVVGTPGRILDLASKGVADFSTANTFVMDEADKLLSPEFTPIIEQL 203

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K+++ P  I   D    L GV Q  A        
Sbjct: 204 LGYFPNNRQIMLFSATFPMVVKTFKDKFLIKPYEINLMDELT-LRGVTQYYA-------- 254

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              YV+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 255 ---YVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQS 311

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GR+G  
Sbjct: 312 HRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHL 371

Query: 363 GLVITIVSAE 372
           GL I +++ E
Sbjct: 372 GLAINLITYE 381


>gi|2500520|sp|Q40467.1|IF414_TOBAC RecName: Full=Eukaryotic initiation factor 4A-14; Short=eIF-4A-14;
           AltName: Full=ATP-dependent RNA helicase eIF4A-14
 gi|485943|emb|CAA55742.1| unnamed protein product [Nicotiana tabacum]
          Length = 413

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 125/358 (34%), Positives = 193/358 (53%), Gaps = 37/358 (10%)

Query: 35  GLQEN--------GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKL 86
           GLQEN        GF K S IQ         G D I Q++SGTGK+  F    L +L   
Sbjct: 46  GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-DY 104

Query: 87  PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVV 142
            + + Q ++LAPTRE+A QI  V+R++G ++  + V   +GGT V   +R +Q    +VV
Sbjct: 105 SLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQSGVHVVV 163

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+  M++ + L  D +++F++DEAD++++ GF + I  I+  LPP  Q+ V SAT 
Sbjct: 164 GTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATM 223

Query: 203 SHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK----- 255
             + L   +K+M  P  +L++ +D T  L G+KQ              YV+ +K+     
Sbjct: 224 PPEALEITRKFMSKPVRILVKRDDVT--LEGIKQF-------------YVNVDKEEWKLE 268

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + + + +       G  DQ  R   +  F+ G
Sbjct: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 328

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
             R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ +
Sbjct: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKD 386


>gi|148231835|ref|NP_001079623.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A [Xenopus laevis]
 gi|28278799|gb|AAH45239.1| MGC53693 protein [Xenopus laevis]
 gi|31580806|gb|AAP51031.1| DECD-box RNA helicase [Xenopus laevis]
 gi|76779487|gb|AAI06295.1| MGC53693 protein [Xenopus laevis]
          Length = 427

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 126/382 (32%), Positives = 204/382 (53%), Gaps = 19/382 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L + I
Sbjct: 48  DFLLKPELLRSIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQ-I 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
           +    Q   +++  TRE+A QI+        ++  + V  F GG  +++ +  ++     
Sbjct: 107 EAVEGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEDTIRKSCPH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +++ K LN+ +V+ F++DE DK++       D+  I+   P  KQ ++ 
Sbjct: 167 IVVGTPGRILALVRSKILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ +  +D T+  L G++Q            L+  ++ +KL 
Sbjct: 227 SATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYV--------KLKDSEKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + R
Sbjct: 279 DLLDVLEFNQVVIFVKSVQRCMALAQLLIEQNFPAIAIHRNMSQEERLSRYQQFKDFQRR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           ILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E   K 
Sbjct: 339 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAK- 397

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ ++      NVG +PD +
Sbjct: 398 --ILNDVQDRFEVNVGELPDEI 417


>gi|126138430|ref|XP_001385738.1| RNA helicase of DEAD box family [Scheffersomyces stipitis CBS 6054]
 gi|146286118|sp|A3LWX3.1|DHH1_PICST RecName: Full=ATP-dependent RNA helicase DHH1
 gi|126093016|gb|ABN67709.1| RNA helicase of DEAD box family [Scheffersomyces stipitis CBS 6054]
          Length = 509

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 201/368 (54%), Gaps = 22/368 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 20  QTEDVLNTKGKSFE-DFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGT 78

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F++ +L + IK  + + Q +IL PTRE+A+Q + VVR++G H+  +      GGT
Sbjct: 79  GKTASFIIPSLQQ-IKPKLNKIQALILVPTRELALQTSQVVRTLGKHL-GIQCMVTTGGT 136

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R   PV ++VG+PGR+  +      ++    LF+MDEADK+++  F   I  I
Sbjct: 137 SLKDDILRLNDPVHVLVGTPGRVLDLAARSVADLSECPLFVMDEADKMLSREFKGIIEQI 196

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q L+ SAT+     + + K++  P  I   D    L G+ Q  A        
Sbjct: 197 LEFFPKNRQSLLFSATFPLAVKSFMDKHLNKPYEINLMDELT-LRGITQYYA-------- 247

Query: 246 SLRYVDEEKKLV---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 248 ---FVEEKQKLHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQ 304

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 305 ARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHL 364

Query: 363 GLVITIVS 370
           GL I ++S
Sbjct: 365 GLAINLMS 372


>gi|373487849|ref|ZP_09578515.1| DEAD/DEAH box helicase domain protein [Holophaga foetida DSM 6591]
 gi|372007623|gb|EHP08252.1| DEAD/DEAH box helicase domain protein [Holophaga foetida DSM 6591]
          Length = 382

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 114/340 (33%), Positives = 188/340 (55%), Gaps = 16/340 (4%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ-PQTIILAP 98
           GF    P+Q  A P VL G+D +VQ+++G+GK+I F+   L+ L K P +  P+T++L P
Sbjct: 20  GFESPFPVQEQAIPAVLAGHDLVVQAETGSGKTIAFLAPLLHLLAKTPPRAAPRTLVLVP 79

Query: 99  TREIAVQITDVVRSVGAHVK-NLHVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQMIK 153
           TRE+A+Q++D    +  H+   L V    GG  V      ++    +VV +PGR+  ++ 
Sbjct: 80  TRELAMQVSDRALELAKHLPITLRVRKAFGGVSVNPQMLALRGGADMVVATPGRLLDLVG 139

Query: 154 LKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKY 213
              L++  VR  ++DEADK+++ GF++++  +   LP  +Q L+ SAT +      ++ +
Sbjct: 140 RNALSLGGVRHLVIDEADKMLDLGFMDEMKELVGLLPAKRQTLLFSATMNTAVQGVIEAF 199

Query: 214 MVDPLLIRPEDATRPLLGVKQLVALIP-ECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFS 272
           +  P  I  E A RP   + +   L+P E K P LR         +LL +  + Q ++F 
Sbjct: 200 LRTPQNILVETAPRPTASITERAYLLPMEDKGPFLR---------ELLGREAWAQVLVFV 250

Query: 273 NYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAA 332
           +   + + +   L N    A  + G + Q AR  +L  F+ G++R+LV TDL +RGID +
Sbjct: 251 SSGRKADNVVRKLGNNGVRALAIHGDKPQGARTEALQQFRSGRLRVLVATDLISRGIDVS 310

Query: 333 NVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
            +  VIN ++P  A  Y+HR+GR GR G  G  I++VS E
Sbjct: 311 GLPCVINYDLPRSARDYVHRIGRTGRAGLDGTAISLVSPE 350


>gi|410938346|ref|ZP_11370199.1| DEAD/DEAH box helicase [Leptospira noguchii str. 2006001870]
 gi|410786575|gb|EKR75513.1| DEAD/DEAH box helicase [Leptospira noguchii str. 2006001870]
          Length = 513

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 194/347 (55%), Gaps = 13/347 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I+  + E GF + SPIQ  A P +L G D I  +++GTGK+  F +  + +L+++  +  
Sbjct: 15  IQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTI-ELLEVESKHL 73

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGR 147
           Q +IL PTRE+ +Q+++  R +  +  N  V    GG ++ER  R +    QIV+ +PGR
Sbjct: 74  QALILCPTRELVIQVSEQFRKLMKYKGNFEVVPIYGGQEIERQFRALRKNPQIVIATPGR 133

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   +++D +++ ++DEAD++++ GF ED+ +I     P +Q ++ SAT + D L
Sbjct: 134 MMDHMRRGSIHLDEIKIVVLDEADEMLDMGFREDMEFILKDTSPDRQTVMFSATMTEDIL 193

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
             ++K+   P +I   D T   L   ++  +  E +  +     + + L +L+       
Sbjct: 194 TLMKKFQNHPQII---DVTHQKLSAPKIEQIYYEIQENA-----KGEALARLIEYRNVKL 245

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            ++F N + + + + E L +  + AE L G  +QK R   ++ F++G + ILV TD+A R
Sbjct: 246 ALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRKGSIEILVATDVAGR 305

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           GID  NV+ V N ++P D   Y+HR+GR GR G +G+  + +  + +
Sbjct: 306 GIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQI 352


>gi|417322261|ref|ZP_12108795.1| ATP-dependent RNA helicase DeaD [Vibrio parahaemolyticus 10329]
 gi|328470415|gb|EGF41326.1| ATP-dependent RNA helicase DeaD [Vibrio parahaemolyticus 10329]
          Length = 643

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLDQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLRDPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|320588377|gb|EFX00846.1| eukaryotic translation initiation factor [Grosmannia clavigera
           kw1407]
          Length = 396

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 212/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+  +D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DDMNLKPDLLRGIYAYGFERPSAIQQRAIIPVIKNHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 85  IDTNVKQCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVREDMKALQDGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ MI+ ++L  D++++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVQDMIQRRFLKTDAMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|332140113|ref|YP_004425851.1| ATP-dependent RNA helicase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550135|gb|AEA96853.1| ATP-dependent RNA helicase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 589

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 199/360 (55%), Gaps = 16/360 (4%)

Query: 16  SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           + +D+ F+ D+ + +PI Q L++ G+ K SPIQ  + P +L G+D + Q+++GTGK+  F
Sbjct: 3   TTVDMTFK-DLNLPEPILQALEKVGYEKPSPIQAESIPLLLEGHDLLGQAQTGTGKTAAF 61

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQV 131
            +  L   I    ++PQ ++LAPTRE+A+Q+ +  +   +  + + V    GG     Q+
Sbjct: 62  ALPMLAN-IDPEQRKPQLLVLAPTRELAIQVAEAFQVYASFSQKIKVLPVYGGQSYDNQI 120

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
            + KR VQ+VVG+PGRI   IK K L++  ++  ++DEAD+++  GF++D+  I S  P 
Sbjct: 121 RQLKRGVQVVVGTPGRIIDHIKRKTLDLSELKYLVLDEADEMLRMGFIDDVELILSHAPE 180

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI-PECKNPSLRYV 250
            +Q  + SAT         Q+Y+ DP  ++          ++Q    I P  K       
Sbjct: 181 ERQTALFSATMPGPIKKITQRYLKDPKHVKIASKVSTASTIRQRYCQIAPHHKL------ 234

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
              + L +++    F+  +IF   +     + + L+   +  E L+G   Q AR  +++ 
Sbjct: 235 ---EALTRIMEVEVFDGMIIFVRTKTATVELADKLSARGYDVEPLNGDIPQAARERTVEK 291

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            K+GK+ ILV TD+ ARG+D   V  VIN +IP+D+ +Y+HR+GR GR G +G  I  +S
Sbjct: 292 LKQGKIDILVATDVVARGLDVERVSHVINYDIPYDSESYVHRIGRTGRAGRQGDAILFIS 351


>gi|119357571|ref|YP_912215.1| DEAD/DEAH box helicase [Chlorobium phaeobacteroides DSM 266]
 gi|119354920|gb|ABL65791.1| ATP-dependent RNA helicase CsdA [Chlorobium phaeobacteroides DSM
           266]
          Length = 589

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 190/353 (53%), Gaps = 14/353 (3%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           F +  LIE P+ + L+E G+   +PIQ    P +L G D + Q+++GTGK+  F +  L+
Sbjct: 11  FRSLQLIE-PLMKALEEVGYENPTPIQAQTIPLLLEGRDLLGQAQTGTGKTAAFALPILS 69

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRP 137
             I +  ++PQ ++LAPTRE+A+Q+ +       ++K  HV    GG     Q+   K+ 
Sbjct: 70  N-ITIARREPQALVLAPTRELAIQVAEAFHRYAEYLKGFHVLPIYGGQDYGIQLRMLKQG 128

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V +VVG+PGR+   ++   LN+D ++  ++DEAD+++  GF++D+ WI  Q P  +Q+ +
Sbjct: 129 VHVVVGTPGRVMDHMRRGSLNLDGLQCLVLDEADEMLRMGFIDDVEWILDQTPKGRQVAL 188

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
            SAT         QKY+ +P  I  ++ T  +  ++Q   ++       +        L 
Sbjct: 189 FSATLPVPIRRIAQKYLNNPAEITIQNKTTTVEAIRQRYWIVGGSHKLDV--------LT 240

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           ++L   PF+  +IF   +     + E L    + A  L+G   Q  R  +++  K G + 
Sbjct: 241 RILEVEPFDGILIFVRTKTMTLELAEKLQARGYDASALNGDMAQNMRERTVEQLKSGALN 300

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           I++ TD+AARG+D   +  VIN +IP D  +Y+HR+GR GR G  G  I  VS
Sbjct: 301 IVIATDVAARGLDVDRISHVINYDIPSDTESYVHRIGRTGRAGRSGEAILFVS 353


>gi|392571877|gb|EIW65049.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Trametes versicolor FP-101664 SS1]
          Length = 440

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/360 (36%), Positives = 198/360 (55%), Gaps = 22/360 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 61  DFLLKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQL- 119

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV--------ERPK 135
             PV  +   I+L  TRE+A QI +       ++ ++ V  F GGT V        ++ K
Sbjct: 120 -EPVNGEVSVIVLCHTRELAFQIKNEYARFAKYMPDVRVGTFYGGTPVAKDAELLRDKTK 178

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI-NTGFVEDITWIYSQLPPMKQ 194
            P  IVV +PGR+  +++ K L+   V+ FI+DE DK++       D+  I+   P  KQ
Sbjct: 179 CP-HIVVATPGRLNALVRDKVLDASKVKHFILDECDKMLEQLDMRRDVQEIFRATPHHKQ 237

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLL-GVKQLVALIPECKNPSLRYVDEE 253
           +++ SAT + D   T +K+M +PL I  +D T+  L G++Q            L  V + 
Sbjct: 238 VMMFSATLAKDIRITCKKFMANPLEIFVDDETKLTLHGLQQ--------HYVKLEEVGKN 289

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
           +KL +LL    FNQ VIF     R   + + L + NF +  +     Q+ R+A   +FK 
Sbjct: 290 RKLNELLDTLEFNQVVIFVKSVARAIELDKLLVSCNFPSIAIHSGLAQEERIARYTAFKA 349

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
            + RILV TD+  RGID   V++VIN + P DA +YLHR+GRAGR+GT+GL IT VS+ES
Sbjct: 350 FEKRILVATDIFGRGIDVERVNIVINYDSPPDADSYLHRVGRAGRFGTKGLAITFVSSES 409


>gi|60594464|pdb|1XTI|A Chain A, Structure Of Wildtype Human Uap56
          Length = 391

 Score =  199 bits (506), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 12  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 70

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 71  -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 129

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 130 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 189

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 190 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 241

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 242 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 301

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 302 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 361

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 362 ---ILNDVQDRFEVNISELPDEI 381


>gi|51594838|ref|YP_069029.1| ATP-dependent RNA helicase DeaD [Yersinia pseudotuberculosis IP
           32953]
 gi|108808981|ref|YP_652897.1| ATP-dependent RNA helicase DeaD [Yersinia pestis Antiqua]
 gi|108810764|ref|YP_646531.1| ATP-dependent RNA helicase DeaD [Yersinia pestis Nepal516]
 gi|145600551|ref|YP_001164627.1| ATP-dependent RNA helicase DeaD [Yersinia pestis Pestoides F]
 gi|153947592|ref|YP_001402544.1| ATP-dependent RNA helicase DeaD [Yersinia pseudotuberculosis IP
           31758]
 gi|153997472|ref|ZP_02022572.1| cold-shock dead-box protein A [Yersinia pestis CA88-4125]
 gi|161484874|ref|NP_668033.2| ATP-dependent RNA helicase DeaD [Yersinia pestis KIM10+]
 gi|161511438|ref|NP_991988.2| ATP-dependent RNA helicase DeaD [Yersinia pestis biovar Microtus
           str. 91001]
 gi|162420533|ref|YP_001608294.1| ATP-dependent RNA helicase DeaD [Yersinia pestis Angola]
 gi|165925696|ref|ZP_02221528.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165936744|ref|ZP_02225311.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166010049|ref|ZP_02230947.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166214269|ref|ZP_02240304.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398750|ref|ZP_02304274.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420623|ref|ZP_02312376.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423076|ref|ZP_02314829.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|186893847|ref|YP_001870959.1| ATP-dependent RNA helicase DeaD [Yersinia pseudotuberculosis PB1/+]
 gi|218930502|ref|YP_002348377.1| ATP-dependent RNA helicase DeaD [Yersinia pestis CO92]
 gi|229839140|ref|ZP_04459299.1| ATP-dependent RNA helicase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896629|ref|ZP_04511796.1| ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
 gi|229899704|ref|ZP_04514845.1| ATP-dependent RNA helicase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900962|ref|ZP_04516086.1| ATP-dependent RNA helicase [Yersinia pestis Nepal516]
 gi|270489144|ref|ZP_06206218.1| ATP-dependent RNA helicase DeaD [Yersinia pestis KIM D27]
 gi|294505188|ref|YP_003569250.1| cold-shock dead-box protein A [Yersinia pestis Z176003]
 gi|384123654|ref|YP_005506274.1| cold-shock dead-box protein A [Yersinia pestis D106004]
 gi|384127517|ref|YP_005510131.1| cold-shock dead-box protein A [Yersinia pestis D182038]
 gi|384138661|ref|YP_005521363.1| ATP-dependent RNA helicase DeaD [Yersinia pestis A1122]
 gi|384416190|ref|YP_005625552.1| ATP-dependent RNA helicase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
 gi|420548621|ref|ZP_15046414.1| cold-shock DEAD box protein A [Yersinia pestis PY-01]
 gi|420553971|ref|ZP_15051187.1| cold-shock DEAD box protein A [Yersinia pestis PY-02]
 gi|420559574|ref|ZP_15056056.1| cold-shock DEAD box protein A [Yersinia pestis PY-03]
 gi|420564956|ref|ZP_15060892.1| cold-shock DEAD box protein A [Yersinia pestis PY-04]
 gi|420570000|ref|ZP_15065474.1| cold-shock DEAD box protein A [Yersinia pestis PY-05]
 gi|420575664|ref|ZP_15070597.1| cold-shock DEAD box protein A [Yersinia pestis PY-06]
 gi|420580946|ref|ZP_15075399.1| cold-shock DEAD box protein A [Yersinia pestis PY-07]
 gi|420586340|ref|ZP_15080284.1| cold-shock DEAD box protein A [Yersinia pestis PY-08]
 gi|420591444|ref|ZP_15084876.1| cold-shock DEAD box protein A [Yersinia pestis PY-09]
 gi|420596816|ref|ZP_15089703.1| cold-shock DEAD box protein A [Yersinia pestis PY-10]
 gi|420602516|ref|ZP_15094769.1| cold-shock DEAD box protein A [Yersinia pestis PY-11]
 gi|420604424|ref|ZP_15096489.1| cold-shock DEAD box protein A [Yersinia pestis PY-12]
 gi|420613311|ref|ZP_15104498.1| cold-shock DEAD box protein A [Yersinia pestis PY-13]
 gi|420618677|ref|ZP_15109177.1| dbpA RNA binding domain protein [Yersinia pestis PY-14]
 gi|420623992|ref|ZP_15113965.1| cold-shock DEAD box protein A [Yersinia pestis PY-15]
 gi|420628981|ref|ZP_15118492.1| cold-shock DEAD box protein A [Yersinia pestis PY-16]
 gi|420634190|ref|ZP_15123161.1| cold-shock DEAD box protein A [Yersinia pestis PY-19]
 gi|420639410|ref|ZP_15127858.1| cold-shock DEAD box protein A [Yersinia pestis PY-25]
 gi|420644848|ref|ZP_15132827.1| cold-shock DEAD box protein A [Yersinia pestis PY-29]
 gi|420650172|ref|ZP_15137628.1| cold-shock DEAD box protein A [Yersinia pestis PY-32]
 gi|420655791|ref|ZP_15142682.1| cold-shock DEAD box protein A [Yersinia pestis PY-34]
 gi|420661233|ref|ZP_15147545.1| cold-shock DEAD box protein A [Yersinia pestis PY-36]
 gi|420666586|ref|ZP_15152369.1| cold-shock DEAD box protein A [Yersinia pestis PY-42]
 gi|420671444|ref|ZP_15156799.1| dbpA RNA binding domain protein [Yersinia pestis PY-45]
 gi|420676797|ref|ZP_15161664.1| cold-shock DEAD box protein A [Yersinia pestis PY-46]
 gi|420682345|ref|ZP_15166672.1| cold-shock DEAD box protein A [Yersinia pestis PY-47]
 gi|420687757|ref|ZP_15171487.1| cold-shock DEAD box protein A [Yersinia pestis PY-48]
 gi|420692995|ref|ZP_15176075.1| cold-shock DEAD box protein A [Yersinia pestis PY-52]
 gi|420698736|ref|ZP_15181133.1| cold-shock DEAD box protein A [Yersinia pestis PY-53]
 gi|420704609|ref|ZP_15185786.1| dbpA RNA binding domain protein [Yersinia pestis PY-54]
 gi|420706356|ref|ZP_15187271.1| cold-shock DEAD box protein A [Yersinia pestis PY-55]
 gi|420715399|ref|ZP_15195390.1| cold-shock DEAD box protein A [Yersinia pestis PY-56]
 gi|420720921|ref|ZP_15200117.1| cold-shock DEAD box protein A [Yersinia pestis PY-58]
 gi|420726382|ref|ZP_15204932.1| cold-shock DEAD box protein A [Yersinia pestis PY-59]
 gi|420731892|ref|ZP_15209884.1| cold-shock DEAD box protein A [Yersinia pestis PY-60]
 gi|420736880|ref|ZP_15214393.1| cold-shock DEAD box protein A [Yersinia pestis PY-61]
 gi|420742367|ref|ZP_15219322.1| cold-shock DEAD box protein A [Yersinia pestis PY-63]
 gi|420748215|ref|ZP_15224252.1| cold-shock DEAD box protein A [Yersinia pestis PY-64]
 gi|420753501|ref|ZP_15228991.1| cold-shock DEAD box protein A [Yersinia pestis PY-65]
 gi|420759440|ref|ZP_15233756.1| cold-shock DEAD box protein A [Yersinia pestis PY-66]
 gi|420764661|ref|ZP_15238368.1| cold-shock DEAD box protein A [Yersinia pestis PY-71]
 gi|420769903|ref|ZP_15243066.1| cold-shock DEAD box protein A [Yersinia pestis PY-72]
 gi|420774872|ref|ZP_15247573.1| cold-shock DEAD box protein A [Yersinia pestis PY-76]
 gi|420780498|ref|ZP_15252519.1| cold-shock DEAD box protein A [Yersinia pestis PY-88]
 gi|420786098|ref|ZP_15257411.1| cold-shock DEAD box protein A [Yersinia pestis PY-89]
 gi|420791153|ref|ZP_15261954.1| dbpA RNA binding domain protein [Yersinia pestis PY-90]
 gi|420796716|ref|ZP_15266961.1| cold-shock DEAD box protein A [Yersinia pestis PY-91]
 gi|420801819|ref|ZP_15271542.1| cold-shock DEAD box protein A [Yersinia pestis PY-92]
 gi|420807164|ref|ZP_15276389.1| cold-shock DEAD box protein A [Yersinia pestis PY-93]
 gi|420812542|ref|ZP_15281209.1| dbpA RNA binding domain protein [Yersinia pestis PY-94]
 gi|420818021|ref|ZP_15286169.1| cold-shock DEAD box protein A [Yersinia pestis PY-95]
 gi|420823358|ref|ZP_15290950.1| cold-shock DEAD box protein A [Yersinia pestis PY-96]
 gi|420828431|ref|ZP_15295517.1| cold-shock DEAD box protein A [Yersinia pestis PY-98]
 gi|420834030|ref|ZP_15300571.1| cold-shock DEAD box protein A [Yersinia pestis PY-99]
 gi|420838977|ref|ZP_15305047.1| cold-shock DEAD box protein A [Yersinia pestis PY-100]
 gi|420844178|ref|ZP_15309763.1| cold-shock DEAD box protein A [Yersinia pestis PY-101]
 gi|420849839|ref|ZP_15314844.1| cold-shock DEAD box protein A [Yersinia pestis PY-102]
 gi|420855524|ref|ZP_15319646.1| cold-shock DEAD box protein A [Yersinia pestis PY-103]
 gi|420860628|ref|ZP_15324145.1| cold-shock DEAD box protein A [Yersinia pestis PY-113]
 gi|421764998|ref|ZP_16201785.1| ATP-dependent RNA helicase DeaD [Yersinia pestis INS]
 gi|51588120|emb|CAH19726.1| cold-shock dead-box protein A [Yersinia pseudotuberculosis IP
           32953]
 gi|108774412|gb|ABG16931.1| cold-shock dead-box protein A [Yersinia pestis Nepal516]
 gi|108780894|gb|ABG14952.1| cold-shock dead-box protein A [Yersinia pestis Antiqua]
 gi|115349113|emb|CAL22076.1| cold-shock dead-box protein A [Yersinia pestis CO92]
 gi|145212247|gb|ABP41654.1| cold-shock dead-box protein A [Yersinia pestis Pestoides F]
 gi|149289109|gb|EDM39189.1| cold-shock dead-box protein A [Yersinia pestis CA88-4125]
 gi|152959087|gb|ABS46548.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353348|gb|ABX87296.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           Angola]
 gi|165915393|gb|EDR34003.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922308|gb|EDR39485.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165990956|gb|EDR43257.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166204501|gb|EDR48981.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961429|gb|EDR57450.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051254|gb|EDR62662.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057246|gb|EDR66992.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|186696873|gb|ACC87502.1| DEAD/DEAH box helicase domain protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229682301|gb|EEO78393.1| ATP-dependent RNA helicase [Yersinia pestis Nepal516]
 gi|229687196|gb|EEO79271.1| ATP-dependent RNA helicase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695506|gb|EEO85553.1| ATP-dependent RNA helicase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700407|gb|EEO88439.1| ATP-dependent RNA helicase [Yersinia pestis Pestoides A]
 gi|262363250|gb|ACY59971.1| cold-shock dead-box protein A [Yersinia pestis D106004]
 gi|262367181|gb|ACY63738.1| cold-shock dead-box protein A [Yersinia pestis D182038]
 gi|270337648|gb|EFA48425.1| ATP-dependent RNA helicase DeaD [Yersinia pestis KIM D27]
 gi|294355647|gb|ADE65988.1| cold-shock dead-box protein A [Yersinia pestis Z176003]
 gi|320016694|gb|ADW00266.1| ATP-dependent RNA helicase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
 gi|342853790|gb|AEL72343.1| ATP-dependent RNA helicase DeaD [Yersinia pestis A1122]
 gi|391422346|gb|EIQ84931.1| cold-shock DEAD box protein A [Yersinia pestis PY-01]
 gi|391422604|gb|EIQ85165.1| cold-shock DEAD box protein A [Yersinia pestis PY-02]
 gi|391422725|gb|EIQ85277.1| cold-shock DEAD box protein A [Yersinia pestis PY-03]
 gi|391437555|gb|EIQ98404.1| cold-shock DEAD box protein A [Yersinia pestis PY-04]
 gi|391438596|gb|EIQ99329.1| cold-shock DEAD box protein A [Yersinia pestis PY-05]
 gi|391442368|gb|EIR02772.1| cold-shock DEAD box protein A [Yersinia pestis PY-06]
 gi|391454463|gb|EIR13672.1| cold-shock DEAD box protein A [Yersinia pestis PY-07]
 gi|391455039|gb|EIR14191.1| cold-shock DEAD box protein A [Yersinia pestis PY-08]
 gi|391457026|gb|EIR16003.1| cold-shock DEAD box protein A [Yersinia pestis PY-09]
 gi|391470220|gb|EIR27906.1| cold-shock DEAD box protein A [Yersinia pestis PY-10]
 gi|391471261|gb|EIR28840.1| cold-shock DEAD box protein A [Yersinia pestis PY-11]
 gi|391482276|gb|EIR38731.1| cold-shock DEAD box protein A [Yersinia pestis PY-12]
 gi|391486110|gb|EIR42176.1| cold-shock DEAD box protein A [Yersinia pestis PY-13]
 gi|391487779|gb|EIR43678.1| cold-shock DEAD box protein A [Yersinia pestis PY-15]
 gi|391487880|gb|EIR43771.1| dbpA RNA binding domain protein [Yersinia pestis PY-14]
 gi|391502346|gb|EIR56655.1| cold-shock DEAD box protein A [Yersinia pestis PY-19]
 gi|391502543|gb|EIR56830.1| cold-shock DEAD box protein A [Yersinia pestis PY-16]
 gi|391507391|gb|EIR61223.1| cold-shock DEAD box protein A [Yersinia pestis PY-25]
 gi|391518218|gb|EIR70949.1| cold-shock DEAD box protein A [Yersinia pestis PY-29]
 gi|391519539|gb|EIR72166.1| cold-shock DEAD box protein A [Yersinia pestis PY-34]
 gi|391520336|gb|EIR72894.1| cold-shock DEAD box protein A [Yersinia pestis PY-32]
 gi|391532773|gb|EIR84125.1| cold-shock DEAD box protein A [Yersinia pestis PY-36]
 gi|391535536|gb|EIR86597.1| cold-shock DEAD box protein A [Yersinia pestis PY-42]
 gi|391538065|gb|EIR88899.1| dbpA RNA binding domain protein [Yersinia pestis PY-45]
 gi|391551004|gb|EIS00559.1| cold-shock DEAD box protein A [Yersinia pestis PY-46]
 gi|391551323|gb|EIS00845.1| cold-shock DEAD box protein A [Yersinia pestis PY-47]
 gi|391551705|gb|EIS01196.1| cold-shock DEAD box protein A [Yersinia pestis PY-48]
 gi|391565903|gb|EIS13951.1| cold-shock DEAD box protein A [Yersinia pestis PY-52]
 gi|391567257|gb|EIS15141.1| cold-shock DEAD box protein A [Yersinia pestis PY-53]
 gi|391571326|gb|EIS18692.1| dbpA RNA binding domain protein [Yersinia pestis PY-54]
 gi|391582427|gb|EIS28185.1| cold-shock DEAD box protein A [Yersinia pestis PY-56]
 gi|391588569|gb|EIS33576.1| cold-shock DEAD box protein A [Yersinia pestis PY-55]
 gi|391593005|gb|EIS37362.1| cold-shock DEAD box protein A [Yersinia pestis PY-58]
 gi|391596347|gb|EIS40293.1| cold-shock DEAD box protein A [Yersinia pestis PY-60]
 gi|391597106|gb|EIS40959.1| cold-shock DEAD box protein A [Yersinia pestis PY-59]
 gi|391610822|gb|EIS53062.1| cold-shock DEAD box protein A [Yersinia pestis PY-61]
 gi|391611218|gb|EIS53416.1| cold-shock DEAD box protein A [Yersinia pestis PY-63]
 gi|391613235|gb|EIS55225.1| cold-shock DEAD box protein A [Yersinia pestis PY-64]
 gi|391624053|gb|EIS64743.1| cold-shock DEAD box protein A [Yersinia pestis PY-65]
 gi|391627828|gb|EIS67994.1| cold-shock DEAD box protein A [Yersinia pestis PY-66]
 gi|391634435|gb|EIS73713.1| cold-shock DEAD box protein A [Yersinia pestis PY-71]
 gi|391636268|gb|EIS75326.1| cold-shock DEAD box protein A [Yersinia pestis PY-72]
 gi|391646532|gb|EIS84266.1| cold-shock DEAD box protein A [Yersinia pestis PY-76]
 gi|391649862|gb|EIS87210.1| cold-shock DEAD box protein A [Yersinia pestis PY-88]
 gi|391654173|gb|EIS91036.1| cold-shock DEAD box protein A [Yersinia pestis PY-89]
 gi|391659512|gb|EIS95787.1| dbpA RNA binding domain protein [Yersinia pestis PY-90]
 gi|391667086|gb|EIT02459.1| cold-shock DEAD box protein A [Yersinia pestis PY-91]
 gi|391676431|gb|EIT10841.1| cold-shock DEAD box protein A [Yersinia pestis PY-93]
 gi|391676888|gb|EIT11249.1| cold-shock DEAD box protein A [Yersinia pestis PY-92]
 gi|391677300|gb|EIT11618.1| dbpA RNA binding domain protein [Yersinia pestis PY-94]
 gi|391690520|gb|EIT23544.1| cold-shock DEAD box protein A [Yersinia pestis PY-95]
 gi|391693031|gb|EIT25816.1| cold-shock DEAD box protein A [Yersinia pestis PY-96]
 gi|391694760|gb|EIT27390.1| cold-shock DEAD box protein A [Yersinia pestis PY-98]
 gi|391707792|gb|EIT39106.1| cold-shock DEAD box protein A [Yersinia pestis PY-99]
 gi|391710725|gb|EIT41755.1| cold-shock DEAD box protein A [Yersinia pestis PY-100]
 gi|391711304|gb|EIT42281.1| cold-shock DEAD box protein A [Yersinia pestis PY-101]
 gi|391723618|gb|EIT53284.1| cold-shock DEAD box protein A [Yersinia pestis PY-102]
 gi|391724073|gb|EIT53688.1| cold-shock DEAD box protein A [Yersinia pestis PY-103]
 gi|391727026|gb|EIT56300.1| cold-shock DEAD box protein A [Yersinia pestis PY-113]
 gi|411173904|gb|EKS43941.1| ATP-dependent RNA helicase DeaD [Yersinia pestis INS]
          Length = 664

 Score =  199 bits (506), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 191/352 (54%), Gaps = 18/352 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  PI   L + G+ K SPIQ+   P++LNG D +  +++G+GK+  F +  L+  I
Sbjct: 11  DLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAAFGLPLLHN-I 69

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQI 140
           K  ++ PQ ++LAPTRE+AVQ+ + + S   H+  ++V    GG     Q+   ++  Q+
Sbjct: 70  KADLKSPQVLVLAPTRELAVQVAEALSSFSKHINGVNVVALYGGQRYDVQLRALRQGPQV 129

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   +K   LN+ ++   ++DEAD+++  GF+ED+  I +Q+P   Q  + SA
Sbjct: 130 VVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAEHQTALFSA 189

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T         +++M +P  +R          ++  V   P+      R     +K   LV
Sbjct: 190 TMPEAIRRITRRFMKEPQEVR----------IQSSVTTRPDISQSYWRVGGGYRKNEALV 239

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           + L    F+  +IF   +     + E L  + + +  L+G  +Q  R  +L+  K G++ 
Sbjct: 240 RFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLD 299

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           IL+ TD+AARG+D   + LV+N +IP D+ +Y+HR+GR GR G  G  +  V
Sbjct: 300 ILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFV 351


>gi|336467195|gb|EGO55359.1| hypothetical protein NEUTE1DRAFT_46597 [Neurospora tetrasperma FGSC
           2508]
 gi|350288179|gb|EGZ69415.1| ATP-dependent RNA helicase dhh-1 [Neurospora tetrasperma FGSC 2509]
          Length = 507

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/352 (36%), Positives = 189/352 (53%), Gaps = 21/352 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D + ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GTGK+  FV+ ALNK I
Sbjct: 49  DFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNK-I 107

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
              V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT     + R + PV I
Sbjct: 108 NPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLRDDIVRLQDPVHI 166

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGRI  +   +  ++    +FIMDEADKL++  F   I  +    P  +Q+++ SA
Sbjct: 167 VVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSQEFTPVIEQLLQFHPKDRQVMLFSA 226

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T+         K M  P  I   D    L G+ Q  A           +V+E++K   L 
Sbjct: 227 TFPLSVKDFSDKNMTSPYEINLMDELT-LRGITQYYA-----------FVEEKQKVHCLN 274

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L S+   NQ +IF N   R E++ + +    +   Y      Q+AR      F+ G  R
Sbjct: 275 TLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCR 334

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  GL I ++
Sbjct: 335 NLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLI 386


>gi|239918016|ref|YP_002957574.1| DNA/RNA helicase, superfamily II [Micrococcus luteus NCTC 2665]
 gi|239839223|gb|ACS31020.1| DNA/RNA helicase, superfamily II [Micrococcus luteus NCTC 2665]
          Length = 611

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 123/372 (33%), Positives = 200/372 (53%), Gaps = 28/372 (7%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  +   I + L+  G V   PIQ    P  L G+D I Q+K+GTGK++ F + AL + I
Sbjct: 41  DFGVHPAIVEALEAKGIVHPFPIQAMTLPVALGGHDIIGQAKTGTGKTLGFGIPALQRAI 100

Query: 85  ------------KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG---- 128
                       K     PQ +I+APTRE+AVQ+   + +  A  + L +    GG    
Sbjct: 101 GPGEPGWDGLEAKGTAGAPQALIVAPTRELAVQVAGDLTAAAAR-RPLRIATIYGGRAYE 159

Query: 129 TQVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
            Q+E  +R V+IVVG+PGR+  +++ ++L +D V   ++DEAD++++ GF+ D+  + + 
Sbjct: 160 PQIEELQRGVEIVVGTPGRLIDLMRQRHLRLDLVNTVVLDEADEMLDLGFLPDVETLLAA 219

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR---PEDATRPLLGVKQLVALIPECKNP 245
           +P ++Q ++ SAT     +A  ++YM  P  IR   PED       ++QLV         
Sbjct: 220 VPAVRQTMLFSATMPGPVVAMARRYMTQPTHIRAADPEDEGLTKKDIRQLVY-------- 271

Query: 246 SLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              ++D+++ + + L      + +IF+  +     + + L    F A  L G   Q AR 
Sbjct: 272 RAHHMDKDELVARALQAEGRGRTIIFTRTKRTAARVADELTARGFAAGALHGDLGQGARE 331

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLV 365
            +L +F+ GKV ILV TD+AARGID  +V  V N + P D  TY+HR+GR GR G +G+ 
Sbjct: 332 QALRAFRNGKVDILVATDVAARGIDVDDVTHVFNFQAPEDEKTYVHRVGRTGRAGNKGVA 391

Query: 366 ITIVSAESLVKF 377
           +T+V  E + ++
Sbjct: 392 VTLVDWEDMPRW 403


>gi|410075884|ref|XP_003955524.1| hypothetical protein KAFR_0B00910 [Kazachstania africana CBS 2517]
 gi|372462107|emb|CCF56389.1| hypothetical protein KAFR_0B00910 [Kazachstania africana CBS 2517]
          Length = 512

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 132/388 (34%), Positives = 204/388 (52%), Gaps = 24/388 (6%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL+     FE D  +++ +  G+ E GF K SPIQ  + P  + G D + ++K+GT
Sbjct: 35  QTEDVLNIKGNTFE-DFHLKRELLMGIFEAGFEKPSPIQEESIPVAITGRDILARAKNGT 93

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K IK  V + Q +I+ PTRE+A+Q + VVR++G H   +      GGT
Sbjct: 94  GKTAAFVIPTLQK-IKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGT 151

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R    V ++VG+PGR+  +   K  ++    LFIMDEADK+++  F   I  I
Sbjct: 152 NLRDDILRLNDTVHVLVGTPGRVLDLASRKIADLSECALFIMDEADKMLSRDFKTIIEQI 211

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLVALIPECKN 244
              LP   Q L+ SAT+       + K++  P  I   E+ T  L G+ Q  A       
Sbjct: 212 LIFLPKNHQSLLFSATFPLTVKEFMVKHLNKPYEINLMEELT--LKGITQYYA------- 262

Query: 245 PSLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQ 301
               +V+E +KL     L ++   NQ +IF N   R E++ + + +  +   Y      Q
Sbjct: 263 ----FVEERQKLHCLNTLFAKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQ 318

Query: 302 KARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGT 361
           + R      F++GKVR LV +DL  RGID   V++VIN + P  A TYLHR+GR+GR+G 
Sbjct: 319 QERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGH 378

Query: 362 RGLVITIVSAESLVKFHSLMGEINLDHA 389
            GL I +++       + +  E+  + A
Sbjct: 379 LGLAINLINWNDRFNLYKIEQELGTEIA 406


>gi|156089485|ref|XP_001612149.1| eukaryotic translation initiation factor 4A [Babesia bovis T2Bo]
 gi|154799403|gb|EDO08581.1| eukaryotic translation initiation factor 4A, putative [Babesia
           bovis]
          Length = 402

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 125/358 (34%), Positives = 197/358 (55%), Gaps = 24/358 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   GF + S IQ      ++  +D I Q++SGTGK+  F +AAL 
Sbjct: 31  FEALKLNEDLLR-GIYSYGFERPSAIQQRGIKPIIENHDTIGQAQSGTGKTATFSIAAL- 88

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRP 137
           +LI   V   Q +ILAPTRE+A QI  VV ++G ++K +     +GGT     V + K  
Sbjct: 89  QLIDYSVVSCQVLILAPTRELAQQIQKVVLALGDYLK-VQCHACVGGTIVRDDVHKLKAG 147

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V +VVG+PGR+  MI  K L  + ++LFI+DEAD++++ GF   I  ++ ++PP  Q+ +
Sbjct: 148 VHMVVGTPGRVYDMIDKKALLTNKIKLFILDEADEMLSRGFKGQIHEVFRRMPPDVQVAL 207

Query: 198 VSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
            SAT  ++ L    K+M  P  +L++ ++ T  L G+KQ   +I +          EE K
Sbjct: 208 FSATMPNEILELTTKFMRSPKRILVKKDELT--LEGIKQFYVMIDK----------EEYK 255

Query: 256 ---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
              L  L       Q +I+ N + + +++   +   +F    + G   Q  R   +  F+
Sbjct: 256 FDTLCDLYESVTITQAIIYCNTRRKVDMLTSKMQERDFTVSSMHGDMSQNERDLIMREFR 315

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            G  R+L+TTDL ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++
Sbjct: 316 SGSTRVLITTDLLARGIDVQQVSLVINYDLPMSPDNYIHRIGRSGRFGRKGVAINFLT 373


>gi|342882939|gb|EGU83503.1| hypothetical protein FOXB_05913 [Fusarium oxysporum Fo5176]
          Length = 523

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 195/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FEN  L ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 39  QTEDVTNTKGLEFENFAL-KRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGT 97

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L + I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 98  GKTAAFVIPTLER-INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 155

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 156 GLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQL 215

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A        
Sbjct: 216 LQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA-------- 266

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 267 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQH 323

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 324 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 383

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 384 GLAINLI 390


>gi|259145266|emb|CAY78530.1| Fal1p [Saccharomyces cerevisiae EC1118]
 gi|323309503|gb|EGA62714.1| Fal1p [Saccharomyces cerevisiae FostersO]
 gi|323334268|gb|EGA75650.1| Fal1p [Saccharomyces cerevisiae AWRI796]
 gi|349577091|dbj|GAA22260.1| K7_Fal1p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 399

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 126/377 (33%), Positives = 204/377 (54%), Gaps = 28/377 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L + I L  +  Q 
Sbjct: 36  RGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL-QAIDLRKKDLQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE-----RPKRPVQIVVGSPGRI 148
           +IL+PTRE+A QI  VV+++G ++ N++     GG  ++       K   Q V G+PGR+
Sbjct: 95  LILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L   +V++ ++DEAD+L++   GF + I  I+++LP   Q++VVSAT + D 
Sbjct: 154 LDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K+M DP+ I  +     L G+KQ V             VD+E+     L  +   
Sbjct: 214 LEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKEEWKFDTLCDIYDS 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + + + L  +NF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++   L K      
Sbjct: 323 DVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLR---- 378

Query: 383 EINLDHAFNVGLVPDNL 399
           EI   ++  +  +P N 
Sbjct: 379 EIEKFYSIKINPMPANF 395


>gi|242096928|ref|XP_002438954.1| hypothetical protein SORBIDRAFT_10g028940 [Sorghum bicolor]
 gi|241917177|gb|EER90321.1| hypothetical protein SORBIDRAFT_10g028940 [Sorghum bicolor]
          Length = 414

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 204/382 (53%), Gaps = 27/382 (7%)

Query: 3   HDIQKCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
            ++     T++  ++ D +FE  +D+ +++ + +G+   GF K S IQ         G D
Sbjct: 21  QELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 80

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 81  VIQQAQSGTGKTATFCSGILQQL-DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GV 138

Query: 121 HVDYFIGGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R     V +VVG+PGR+  M++ + L  D++++F++DEAD++++ 
Sbjct: 139 KVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSR 198

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 199 GFKDQIYDIFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF- 257

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 258 ------------YVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 305

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 306 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 365

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 366 HRIGRSGRFGRKGVAINFVTRD 387


>gi|190405005|gb|EDV08272.1| eukaryotic initiation factor 4A-12 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 399

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 122/358 (34%), Positives = 197/358 (55%), Gaps = 24/358 (6%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L + I L  +  Q 
Sbjct: 36  RGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL-QAIDLRKKDLQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE-----RPKRPVQIVVGSPGRI 148
           +IL+PTRE+A QI  VV+++G ++ N++     GG  ++       K   Q V G+PGR+
Sbjct: 95  LILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L   +V++ ++DEAD+L++   GF + I  I+++LP   Q++VVSAT + D 
Sbjct: 154 LDMIKRQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K+M DP+ I  +     L G+KQ V             VD+E+     L  +   
Sbjct: 214 LEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKEEWKFDTLCDIYDS 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + + + L  +NF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           D+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++   L K   +
Sbjct: 323 DVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREI 380


>gi|384131186|ref|YP_005513798.1| rhlB [Acinetobacter baumannii 1656-2]
 gi|385238196|ref|YP_005799535.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii
           TCDC-AB0715]
 gi|416147350|ref|ZP_11601728.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB210]
 gi|322507406|gb|ADX02860.1| rhlB [Acinetobacter baumannii 1656-2]
 gi|323518696|gb|ADX93077.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii
           TCDC-AB0715]
 gi|333365581|gb|EGK47595.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB210]
          Length = 389

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 111/354 (31%), Positives = 200/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PVQ+ 
Sbjct: 20  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPVQEQ 79

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    +S+     NLH+   +GG   ++ K+      V I
Sbjct: 80  RFRGEPRALILAPTRELALQIESDAKSL-TKFSNLHLVTLLGGVDFDKQKKQLDANFVDI 138

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 139 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMF 198

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ + L  
Sbjct: 199 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAK--------QDKYRLLQD 250

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  L+ FK+GK  I
Sbjct: 251 ILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGKHNI 310

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 311 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 364


>gi|213407104|ref|XP_002174323.1| ATP-dependent RNA helicase dhh1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212002370|gb|EEB08030.1| ATP-dependent RNA helicase dhh1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 498

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 201/382 (52%), Gaps = 22/382 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 35  KTEDVTNTRGTEFE-DYYLKRELLMGIFEAGFERPSPIQEESIPIALAGRDILARAKNGT 93

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ +L K +     + QT+IL PTRE+A+Q + V +++G H+ N++V    GGT
Sbjct: 94  GKTAAFVIPSLEK-VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHM-NVNVMVTTGGT 151

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV IVVG+PGR+  +      +      F+MDEADKL++  F   I  +
Sbjct: 152 TLRDDIIRLNEPVHIVVGTPGRVLDLAGKGVADFSECSNFVMDEADKLLSPEFTPIIEQL 211

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            +  P  +Q+ + SAT+     + + K++  P  I   D    L GV Q  A        
Sbjct: 212 LTHFPKNRQISLYSATFPLLVKSFMDKHLNKPYEINLMDELT-LRGVTQYYA-------- 262

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +VDE +K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 263 ---FVDERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQS 319

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R     +F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GR+G R
Sbjct: 320 HRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHR 379

Query: 363 GLVITIVSAESLVKFHSLMGEI 384
           GL I+ +S E     + +  E+
Sbjct: 380 GLAISFISWEDRFNLYKIETEL 401


>gi|164425692|ref|XP_960011.2| hypothetical protein NCU06149 [Neurospora crassa OR74A]
 gi|161789041|sp|Q7S5D9.2|DHH1_NEUCR RecName: Full=ATP-dependent RNA helicase dhh-1
 gi|157071024|gb|EAA30775.2| hypothetical protein NCU06149 [Neurospora crassa OR74A]
          Length = 505

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/352 (36%), Positives = 189/352 (53%), Gaps = 21/352 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D + ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GTGK+  FV+ ALNK I
Sbjct: 49  DFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNK-I 107

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
              V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT     + R + PV I
Sbjct: 108 NPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLRDDIVRLQDPVHI 166

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGRI  +   +  ++    +FIMDEADKL++  F   I  +    P  +Q+++ SA
Sbjct: 167 VVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSQEFTPVIEQLLQFHPKDRQVMLFSA 226

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T+         K M  P  I   D    L G+ Q  A           +V+E++K   L 
Sbjct: 227 TFPLSVKDFSDKNMTSPYEINLMDELT-LRGITQYYA-----------FVEEKQKVHCLN 274

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L S+   NQ +IF N   R E++ + +    +   Y      Q+AR      F+ G  R
Sbjct: 275 TLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCR 334

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  GL I ++
Sbjct: 335 NLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLI 386


>gi|320590896|gb|EFX03337.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
          Length = 530

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 196/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FE +  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 37  QTEDVTNTKGLEFE-EFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL K I   V + Q +IL PTRE+A+Q + V +S+G H+ N++V    GGT
Sbjct: 96  GKTAAFVIPALEK-INPKVSKIQCLILVPTRELAMQTSQVCKSLGKHL-NINVMVTTGGT 153

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R +  V IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 154 GLRDDIVRLQEAVHIVVGTPGRILDLASKNVADLSECPMFIMDEADKLLSAEFTPVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A        
Sbjct: 214 LQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 265 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQ 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 322 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 381

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 382 GLAINLI 388


>gi|115444197|ref|NP_001045878.1| Os02g0146600 [Oryza sativa Japonica Group]
 gi|75325389|sp|Q6Z2Z4.1|IF4A3_ORYSJ RecName: Full=Eukaryotic initiation factor 4A-3; Short=eIF-4A-3;
           AltName: Full=ATP-dependent RNA helicase eIF4A-3;
           AltName: Full=DEAD-box ATP-dependent RNA helicase 23;
           AltName: Full=eIF4A-2
 gi|45736055|dbj|BAD13081.1| putative translational initiation factor eIF-4A [Oryza sativa
           Japonica Group]
 gi|113535409|dbj|BAF07792.1| Os02g0146600 [Oryza sativa Japonica Group]
 gi|125538069|gb|EAY84464.1| hypothetical protein OsI_05839 [Oryza sativa Indica Group]
 gi|215707096|dbj|BAG93556.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222622164|gb|EEE56296.1| hypothetical protein OsJ_05367 [Oryza sativa Japonica Group]
          Length = 414

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 27/373 (7%)

Query: 12  KDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           ++  ++ D +FE  +D+ +++ + +G+   GF K S IQ         G D I Q++SGT
Sbjct: 30  EEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 89

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F    L +L    + + Q+++LAPTRE+A QI  V+R++G ++  + V   +GGT
Sbjct: 90  GKTATFCSGILQQL-DYGLVECQSLVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 147

Query: 130 QVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            V   +R     V +VVG+PGR+  M++ + L  D +++F++DEAD++++ GF + I  I
Sbjct: 148 SVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDI 207

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
           +  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ           
Sbjct: 208 FQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF---------- 257

Query: 246 SLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQ 299
              YV+ EK+      L  L       Q VIF N + + + + + + + +       G  
Sbjct: 258 ---YVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDM 314

Query: 300 DQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRY 359
           DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+
Sbjct: 315 DQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 374

Query: 360 GTRGLVITIVSAE 372
           G +G+ I  V+ +
Sbjct: 375 GRKGVAINFVTRD 387


>gi|21957415|gb|AAM84284.1|AE013672_2 inducible ATP-independent RNA helicase [Yersinia pestis KIM10+]
 gi|45435306|gb|AAS60865.1| inducible ATP-independent RNA helicase [Yersinia pestis biovar
           Microtus str. 91001]
          Length = 669

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 191/352 (54%), Gaps = 18/352 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  PI   L + G+ K SPIQ+   P++LNG D +  +++G+GK+  F +  L+  I
Sbjct: 16  DLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAAFGLPLLHN-I 74

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQI 140
           K  ++ PQ ++LAPTRE+AVQ+ + + S   H+  ++V    GG     Q+   ++  Q+
Sbjct: 75  KADLKSPQVLVLAPTRELAVQVAEALSSFSKHINGVNVVALYGGQRYDVQLRALRQGPQV 134

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   +K   LN+ ++   ++DEAD+++  GF+ED+  I +Q+P   Q  + SA
Sbjct: 135 VVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAEHQTALFSA 194

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T         +++M +P  +R          ++  V   P+      R     +K   LV
Sbjct: 195 TMPEAIRRITRRFMKEPQEVR----------IQSSVTTRPDISQSYWRVGGGYRKNEALV 244

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           + L    F+  +IF   +     + E L  + + +  L+G  +Q  R  +L+  K G++ 
Sbjct: 245 RFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLD 304

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           IL+ TD+AARG+D   + LV+N +IP D+ +Y+HR+GR GR G  G  +  V
Sbjct: 305 ILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFV 356


>gi|343500286|ref|ZP_08738182.1| ATP-dependent RNA helicase DeaD [Vibrio tubiashii ATCC 19109]
 gi|418480787|ref|ZP_13049842.1| cold-shock DEAD-box protein A [Vibrio tubiashii NCIMB 1337 = ATCC
           19106]
 gi|342820665|gb|EGU55483.1| ATP-dependent RNA helicase DeaD [Vibrio tubiashii ATCC 19109]
 gi|384571547|gb|EIF02078.1| cold-shock DEAD-box protein A [Vibrio tubiashii NCIMB 1337 = ATCC
           19106]
          Length = 648

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 123/376 (32%), Positives = 202/376 (53%), Gaps = 20/376 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLALNDSILSALDGMGFVSPTPIQAAAIPHLLAGKDALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   V+++G ++  L V    GG     Q+   K    
Sbjct: 69  -DLAQRKPQAIVLAPTRELAIQVAAEVKNLGQNIAGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR++ +I    L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 IVVGTPGRVQDLINRDRLHLDEVHTFVLDEADEMLNMGFVDDVTEIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT      + +++++ DP  +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKSIVERFLRDPETVDVAGKNHTVDKVEQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L    F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLCARGFKASALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    L    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQLRMLRT 359

Query: 380 L-------MGEINLDH 388
           +       M EI L H
Sbjct: 360 IERVTKSSMEEIQLPH 375


>gi|452912129|ref|ZP_21960782.1| putative ATP-dependent RNA helicase [Kocuria palustris PEL]
 gi|452832711|gb|EME35539.1| putative ATP-dependent RNA helicase [Kocuria palustris PEL]
          Length = 655

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 205/390 (52%), Gaps = 40/390 (10%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  + + I + L E G V   PIQ    P  L+G D I Q+K+GTGK++ F + A+  ++
Sbjct: 72  DFGVREDIAEALAEAGIVHPFPIQSMTLPIALSGQDIIGQAKTGTGKTLGFGIPAVQNVV 131

Query: 85  ----------KLPVQQPQTIILAPTREIAVQI-TDVVRSVGAHVKNLHVDYFIGG----T 129
                     + P   PQ +I+ PTRE+AVQ+ +D+  S+ A  +N  V    GG     
Sbjct: 132 GRDDDGWDRLERP-GAPQALIVVPTRELAVQVGSDL--SIAAKTRNARVLTIYGGRAYEP 188

Query: 130 QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQL 189
           Q+E  ++ V++VVG+PGR+  + +  +L++  V+  ++DEAD++++ GF+ D+  + S +
Sbjct: 189 QIEALEKGVEVVVGTPGRLIDLNRQHHLDLSQVKTVVLDEADEMLDLGFLPDVEKLLSAV 248

Query: 190 PPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLG-----VKQLVALIPECKN 244
           P +   ++ SAT     +A  ++YM  P+ IR   A  P  G     ++Q+V       N
Sbjct: 249 PRVPHTMLFSATMPGPVVAMARRYMSKPMHIR---AAAPDEGSTKADIRQVVY---RAHN 302

Query: 245 PSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKAR 304
                +D+ + L ++L      +C+IF   +     + + L    F A  L G   Q AR
Sbjct: 303 -----LDKPEMLGRILQADGRGRCIIFIRTKRTAAKVADELIERGFAAAPLHGDLGQGAR 357

Query: 305 LASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGL 364
             +L +F+  KV ILV TD+AARGID  +V  VIN + P D  TYLHR GR GR G +G 
Sbjct: 358 EQALRAFRSSKVDILVATDVAARGIDVDDVTHVINYQCPEDEKTYLHRTGRTGRAGRKGT 417

Query: 365 VITIVSAESLVKFHSLMGEINLDHAFNVGL 394
            IT V  + + ++        +D A  +G+
Sbjct: 418 AITFVDWDDIPRWRL------IDKALELGI 441


>gi|374296930|ref|YP_005047121.1| DNA/RNA helicase [Clostridium clariflavum DSM 19732]
 gi|359826424|gb|AEV69197.1| DNA/RNA helicase, superfamily II [Clostridium clariflavum DSM
           19732]
          Length = 486

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 199/359 (55%), Gaps = 18/359 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I  PI + L++ GF K + +Q  A P++LN  D IV SK+G+GK+ VF V+ L +LI   
Sbjct: 10  ISPPILKALEKMGFEKPTEVQSRAIPHILNQEDLIVMSKTGSGKTAVFGVSML-QLIDPG 68

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG-----TQVERPKRPVQIVV 142
              PQ +IL PTRE+AVQI + +R +  + +  H    + G      +++  KR V IV 
Sbjct: 69  EPGPQGLILTPTRELAVQINNELRKMSRYTR--HRTTAVYGQHSMDAEIQALKRGVSIVT 126

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+   I+ + L   ++R  ++DEAD++++ GF++ +  I   LP  +  L++SAT 
Sbjct: 127 GTPGRVNDHIQNQNLETSNLRFLVLDEADRMLDMGFLDQVVNIIQALPRNRITLLLSATI 186

Query: 203 SHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI-PECKNPSLRYVDEEKKLVQLLS 261
            H+     +KYM  PL I  +  T+ +  ++Q+   +    KN  L ++        +L+
Sbjct: 187 PHEIRRISRKYMRKPLTIEIKSETKTVDSIEQIYYPVESHKKNTVLNHL--------ILN 238

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
           + P   C+IF N +     +   L    +  + L G   Q  RL ++  FK+G+  +LV 
Sbjct: 239 ERP-ESCMIFCNTRATVNKLQSFLYRKGYKCQALHGNIPQHKRLKTIQQFKQGEFNLLVA 297

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           TD+AARGI   N+ LVIN ++P D   Y+HR+GR GR G  G  IT+V+ E +   H++
Sbjct: 298 TDVAARGIHIDNLSLVINYDVPLDKDNYIHRIGRTGRAGNSGRAITLVTGEDIKALHAI 356


>gi|398365053|ref|NP_010304.3| Fal1p [Saccharomyces cerevisiae S288c]
 gi|2500524|sp|Q12099.1|FAL1_YEAST RecName: Full=ATP-dependent RNA helicase FAL1; AltName:
           Full=Translation initiation factor four A-like protein 1
 gi|160385737|sp|A6ZXY5.1|FAL1_YEAS7 RecName: Full=ATP-dependent RNA helicase FAL1; AltName:
           Full=Translation initiation factor four A-like protein 1
 gi|840874|emb|CAA89846.1| unknown [Saccharomyces cerevisiae]
 gi|1216228|emb|CAA65213.1| orf:PZC399 [Saccharomyces cerevisiae]
 gi|1431450|emb|CAA98842.1| FAL1 [Saccharomyces cerevisiae]
 gi|51830220|gb|AAU09684.1| YDR021W [Saccharomyces cerevisiae]
 gi|151942009|gb|EDN60365.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|256273263|gb|EEU08206.1| Fal1p [Saccharomyces cerevisiae JAY291]
 gi|285811043|tpg|DAA11867.1| TPA: Fal1p [Saccharomyces cerevisiae S288c]
 gi|392300135|gb|EIW11226.1| Fal1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 399

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 126/377 (33%), Positives = 204/377 (54%), Gaps = 28/377 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L + I L  +  Q 
Sbjct: 36  RGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL-QAIDLRKKDLQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE-----RPKRPVQIVVGSPGRI 148
           +IL+PTRE+A QI  VV+++G ++ N++     GG  ++       K   Q V G+PGR+
Sbjct: 95  LILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRV 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L   +V++ ++DEAD+L++   GF + I  I+++LP   Q++VVSAT + D 
Sbjct: 154 LDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K+M DP+ I  +     L G+KQ V             VD+E+     L  +   
Sbjct: 214 LEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKEEWKFDTLCDIYDS 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + + + L  +NF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++   L K      
Sbjct: 323 DVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLR---- 378

Query: 383 EINLDHAFNVGLVPDNL 399
           EI   ++  +  +P N 
Sbjct: 379 EIEKFYSIKINPMPANF 395


>gi|384246787|gb|EIE20276.1| eukaryotic initiation factor 4A-like protein [Coccomyxa
           subellipsoidea C-169]
          Length = 411

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 121/349 (34%), Positives = 186/349 (53%), Gaps = 25/349 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF K S IQ         G D I Q++SGTGK+  F    L  L    + + Q 
Sbjct: 51  RGIYAYGFEKPSAIQQKGIVPFAKGLDVIQQAQSGTGKTATFCAGILQNL-DYNLVECQA 109

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGRIK 149
           ++LAPTRE+A QI  V+R++G + + +     +GGT V    R +Q    +VVG+PGR+ 
Sbjct: 110 LVLAPTRELAQQIEKVMRALGDY-QQVKCHACVGGTSVREDTRILQGGVHVVVGTPGRVY 168

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            M++ + L  DS+R+F++DEAD++++ GF + I  I+  LPP  Q+ V SAT   + L  
Sbjct: 169 DMLRRRALRADSIRMFVLDEADEMLSRGFKDQIYDIFQLLPPKLQVGVFSATLPPEALEI 228

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLLSQT 263
            +K+M  P+ I  +     L G+KQ              YV+ E++      L  L    
Sbjct: 229 TRKFMNKPVRILVKRDELTLEGIKQF-------------YVNVEREEWKLDTLCDLYETL 275

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
              Q VIF+N + + + + + +  ++       G  DQ  R   +  F+ G  R+L+TTD
Sbjct: 276 AITQSVIFANTRRKVDWLTDKMRESDHTVSATHGDMDQNTRDVIMREFRSGSSRVLITTD 335

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           L ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ E
Sbjct: 336 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKE 384


>gi|254431629|ref|ZP_05045332.1| DNA and RNA helicase [Cyanobium sp. PCC 7001]
 gi|197626082|gb|EDY38641.1| DNA and RNA helicase [Cyanobium sp. PCC 7001]
          Length = 437

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 119/363 (32%), Positives = 197/363 (54%), Gaps = 24/363 (6%)

Query: 31  PIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ 90
           PI + + E G+   SPIQ+   P VL G+D +  +++GTGK+  F +  L +L   P  +
Sbjct: 13  PILKAVAEKGYTTPSPIQLECIPTVLAGHDVMAAAQTGTGKTAGFTLPMLERLRHGPHAR 72

Query: 91  P---QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
               + ++L PTRE+A Q+ + V + G ++ +L  D   GG     Q+ R +    I+V 
Sbjct: 73  GGVVRALVLTPTRELAAQVAENVAAYGRYL-DLRSDVVFGGVKINPQINRLRAGADILVA 131

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  + + + + +D V + ++DEAD++++ GF+ DI  + + LPP +Q L+ SAT+S
Sbjct: 132 TPGRLLDLQQQRAIRLDRVEVLVLDEADRMLDMGFIRDIQKLLALLPPKRQNLLFSATFS 191

Query: 204 HDNLATLQKYMVDPLLIR--PEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLS 261
                     +  P+ ++  PE+   P   V+ L+      + P L        L  L++
Sbjct: 192 PSIRKLAHGLLHQPVQLQATPENQAAPT--VEHLLHPCDMARKPEL--------LTHLIA 241

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
              + Q ++FS  +     + + L  A   A  + G + Q AR  +L  FK G+VR+LV 
Sbjct: 242 SNDWQQVLVFSRTKHGANRMADRLCAAGLEAAAIHGNKSQGARTRALAGFKTGEVRVLVA 301

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLM 381
           TDLAARGID   +  V+NL++P+ A  Y+HR+GR GR G  G  I++V+AE     H L+
Sbjct: 302 TDLAARGIDIHQLPHVVNLDLPNQAEDYVHRIGRTGRAGHPGHAISLVAAEE----HELL 357

Query: 382 GEI 384
           G I
Sbjct: 358 GAI 360


>gi|167769379|ref|ZP_02441432.1| hypothetical protein ANACOL_00705 [Anaerotruncus colihominis DSM
           17241]
 gi|167668347|gb|EDS12477.1| DEAD/DEAH box helicase [Anaerotruncus colihominis DSM 17241]
          Length = 439

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 121/377 (32%), Positives = 202/377 (53%), Gaps = 30/377 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   LI+ PI + +++ G+V+ S IQ  A P  L G+D +  +++GTGK+  F +  L 
Sbjct: 21  FEELGLIQ-PILRAVRDEGYVEPSAIQQQAIPPALAGHDVLGCAQTGTGKTAAFAIPILQ 79

Query: 82  KL------IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QV 131
           +L      IK P    + ++L PTRE+A+QI D  +S G +++ L      GG     QV
Sbjct: 80  RLDTQCASIKTPCVI-RALVLTPTRELAIQIKDSFQSYGRYMR-LRSTVVFGGVPQTPQV 137

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           +  +R V I+V +PGR+  +I    +++ SV +F++DEAD++++ GF+ D+  + + LP 
Sbjct: 138 DELRRGVDILVATPGRLNDLIGQGIIDLSSVSVFVLDEADRMLDMGFIHDVERVINHLPN 197

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
            +Q L  SAT     +    + + DP+ +     + P+  ++Q            L +VD
Sbjct: 198 KRQTLFFSATMPKAIMHLCDRILTDPVKVAVTPVSSPVEAIEQ-----------RLYFVD 246

Query: 252 EEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           +  K   L+ LL        ++F+  +   + +   L  A   A+ + G + Q AR  +L
Sbjct: 247 KPNKRRLLIYLLEDVSIVSALVFTFTKHGADRVARELVKAGIKAQAIHGDKSQGARQRAL 306

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVI-- 366
            +FK G +R+LV TD+AARGID   +  V N ++P+   TY+HR+GR GR G  G+ I  
Sbjct: 307 SAFKNGDIRVLVATDIAARGIDIDELSHVFNYDLPNIPETYVHRIGRTGRAGLGGIAISF 366

Query: 367 -TIVSAESLVKFHSLMG 382
            +IV  E+L     L+G
Sbjct: 367 CSIVEMENLHAIEKLIG 383


>gi|358009896|ref|ZP_09141706.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. P8-3-8]
          Length = 383

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 113/354 (31%), Positives = 199/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           ++Q +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+V+ +N L+  P+++ 
Sbjct: 14  LKQAIDALGFKEMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLVSIINDLLNNPIKEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI +  + +     NL+V   +GG   ++ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELAIQIENDAKDL-VKFSNLNVVTLVGGVDFDKQKKQLNQNFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+    + K + +D +   ++DEAD+L++ GF+  +  I  +S     +Q L+ 
Sbjct: 133 IVATPGRLIDFTEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   Q+++ +P+ +  E   +    V+Q V ++ +         D+ K L Q
Sbjct: 193 SATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYVVEK--------KDKYKLLRQ 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L+  P  + +IF+N + +   + ++L    +    LSG   Q  RL  LD FK G+  I
Sbjct: 245 ILADEPIEKVMIFANRRDQVRKLYDHLKADGYKVVMLSGEIAQDKRLKMLDQFKNGQHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR GT+G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTQGVSISFLSED 358


>gi|326433091|gb|EGD78661.1| eIF4AIII-PA [Salpingoeca sp. ATCC 50818]
          Length = 366

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 123/360 (34%), Positives = 191/360 (53%), Gaps = 26/360 (7%)

Query: 7   KCARTKDVLSNIDVL-FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQS 65
           K ++  +V+   D L    D+L      +G+   GF + S IQ  A   +  G D I Q+
Sbjct: 12  KTSKEVEVVPTFDALGLREDLL------RGIYAYGFERPSAIQQRAIKPITKGRDVIAQA 65

Query: 66  KSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF 125
           +SGTGK+  F ++AL + I    ++ Q ++L+PTRE+AVQI  VV ++G ++ ++     
Sbjct: 66  QSGTGKTATFSISAL-QAIDTTTRETQVLVLSPTRELAVQIQKVVLALGDYM-SVQCHAC 123

Query: 126 IGGTQVERPKRPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVED 181
           IGG  +    R +     IV G+PGR+  MI+ + L   S+++ I+DEAD+++N GF E 
Sbjct: 124 IGGQSIGEDIRKLDYGQHIVSGTPGRVFDMIQRRNLRTRSIKMLILDEADEMLNEGFKEQ 183

Query: 182 ITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPE 241
           I  IY  LPP  Q+++VSAT  H+ L    K+M DP+ +  +     L G+KQ    +  
Sbjct: 184 IYDIYRYLPPATQVVLVSATLPHEVLEMTTKFMTDPVRVLVKRDELTLEGIKQFFVAVER 243

Query: 242 CKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
                     EE K   L  L       Q VIF N + + + + E +  ANF    + G 
Sbjct: 244 ----------EEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMKEANFTVSSMHGD 293

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
             QK R   +  F+ G  R+L+TTD+ ARG+D   V LVIN ++P++   Y+HR   +GR
Sbjct: 294 MPQKKRNEIMQEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRPRSSGR 353


>gi|225849264|ref|YP_002729428.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644065|gb|ACN99115.1| ATP-dependent RNA helicase DbpA [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 397

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 115/351 (32%), Positives = 210/351 (59%), Gaps = 18/351 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I +   + L++ G+ K + IQ  A P VL+G D + Q+++GTGK+  F +  +   +
Sbjct: 8   DLGISQETLKSLEDLGYSKPTEIQEKAIPAVLSGKDLVAQAQTGTGKTAAFGIPIVES-V 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT---QVERPKRPVQIV 141
               ++ Q ++L PTRE+A+Q+   ++ +G + K   +  + G +   Q++  K+   +V
Sbjct: 67  NTKQKKIQALVLVPTRELAIQVAKEIKDLGKNKKVFVLSVYGGKSMKHQIDFLKKGNDVV 126

Query: 142 -VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
            VG+PGR+K +++  +L +D+V++F++DEAD+++  GF+EDI  I S LP  +Q L+ SA
Sbjct: 127 IVGTPGRVKDLLERGFLKLDNVKMFVLDEADRMLEMGFIEDIEDIMSYLPEDRQNLLFSA 186

Query: 201 TYSHDNLATLQKYMVD---PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           T   + L   Q+++ +    + ++P++ T  +  +KQ++  +    +P  ++     KL+
Sbjct: 187 TMPKEILELAQEFLNEDYQTIKVKPDEIT--VEKIKQIIYRV----DPKNKF----NKLI 236

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           ++LSQ    + +IF+  +L  + + E+L+   F    + G   QK R   L +F+ GK++
Sbjct: 237 EVLSQNQAEKTIIFTQTKLEADQLSEDLSKEGFSVSAIHGDFSQKKRETVLHNFRTGKLK 296

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
           ILV TD+AARG+D   V+LVIN  +P +A +Y+HR+GR GR G  G  I+I
Sbjct: 297 ILVATDVAARGLDIKGVELVINYGLPKNAESYVHRIGRTGRAGKEGTAISI 347


>gi|159491657|ref|XP_001703776.1| subunit of exon junction complex [Chlamydomonas reinhardtii]
 gi|158270457|gb|EDO96302.1| subunit of exon junction complex [Chlamydomonas reinhardtii]
          Length = 435

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 131/369 (35%), Positives = 193/369 (52%), Gaps = 31/369 (8%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           +++++  + Q + + GF   S +Q    P+ + G D + Q+KSG GK+ VFV++ L +L 
Sbjct: 44  ELMLKPELLQAIADCGFEHPSEVQHECIPHAILGNDVLCQAKSGMGKTAVFVLSILQQL- 102

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
                +   IIL  TRE+A QI        A +K + +  F GG  V + K  ++     
Sbjct: 103 DPKANECHAIILCHTRELAFQICHEFTRFSARMKGVTIGNFYGGIPVTQNKETLKKAVPN 162

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRIKQ+ K   L +  VR F++DE DK++       D   I+   P  KQ+++ 
Sbjct: 163 IVVGTPGRIKQLAKEGALPLKHVRFFVLDECDKMLEKLDMRADCQEIFKLTPHEKQVMMF 222

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLG--VKQLVALIPECKNPSLRYVDEEKKL 256
           SAT + D     +K+M +P  +  +D ++  L   V+  V L  E KN         +KL
Sbjct: 223 SATLNQDMRGVCKKFMTNPQEVYVDDESKLTLHGLVQHYVMLHEEEKN---------RKL 273

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R +++   L   NF +  + G  DQ+ R+     FK GK 
Sbjct: 274 NDLLDALDFNQVVIFVKSVARAKMLNTLLNECNFPSVCIYGGMDQEERIKVYKHFKEGKH 333

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHD-------------AATYLHRMGRAGRYGTRG 363
           RILV TDL  RGID   V++VIN ++P               A TYLHR+GRAGR+GT+G
Sbjct: 334 RILVATDLVGRGIDIERVNIVINYDMPESDDKSKGESKHGNGADTYLHRVGRAGRFGTKG 393

Query: 364 LVITIVSAE 372
           L IT VS++
Sbjct: 394 LAITFVSSQ 402


>gi|378732741|gb|EHY59200.1| ATP-dependent RNA helicase eIF4A [Exophiala dermatitidis
           NIH/UT8656]
          Length = 396

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 138/393 (35%), Positives = 217/393 (55%), Gaps = 25/393 (6%)

Query: 16  SNIDVLFEN-DVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSI 73
           SN D + ++ D +  KP + +G+   GF + S IQ  A   V+ G D I Q++SGTGK+ 
Sbjct: 16  SNYDEVIDSFDAMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGNDVIAQAQSGTGKTA 75

Query: 74  VFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER 133
            F ++AL K I   ++  Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V  
Sbjct: 76  TFSISALQK-IDPNLKACQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTNVRE 133

Query: 134 PKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQL 189
             + +Q    +VVG+PGR++ MI+ + L  D++++FI+DEAD++++ GF E I  I+  L
Sbjct: 134 DMKALQEGPQVVVGTPGRVQDMIQRRVLKTDNIKMFILDEADEMLSRGFTEQIYDIFQLL 193

Query: 190 PPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRY 249
           P   Q++++SAT   D L    K+M DP+ I  + A   L G+KQ    + +        
Sbjct: 194 PQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEK-------- 245

Query: 250 VDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLA 306
             EE KL     L       Q VIF N + + + + + L   +F    + G  +Q  R  
Sbjct: 246 --EEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDV 303

Query: 307 SLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVI 366
            +  F+ G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I
Sbjct: 304 IMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAI 363

Query: 367 TIVSAESLVKFHSLMGEINLDHAFNVGLVPDNL 399
             V+A+ +     +M EI   ++  +  +P N+
Sbjct: 364 NFVTADDV----RMMREIEQFYSTQIEEMPMNV 392


>gi|302900149|ref|XP_003048204.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729136|gb|EEU42491.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 487

 Score =  199 bits (505), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/367 (36%), Positives = 196/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FEN  L ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 39  QTEDVTNTKGLEFENFAL-KRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGT 97

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL + I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 98  GKTAAFVIPALER-INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGT 155

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 156 GLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQL 215

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A        
Sbjct: 216 LQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA-------- 266

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 267 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQH 323

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 324 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 383

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 384 GLAINLI 390


>gi|145517226|ref|XP_001444496.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411918|emb|CAK77099.1| unnamed protein product [Paramecium tetraurelia]
          Length = 434

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 121/358 (33%), Positives = 199/358 (55%), Gaps = 24/358 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ + K + +G+   GF + S IQ  A   ++ G D + Q++SGTGK+  F + AL + I
Sbjct: 60  DLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQR-I 118

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRPVQI 140
               ++ Q IILAP RE+A QI DVV+ +G ++ N+     IGGT      E+ K+ V I
Sbjct: 119 DPNQRKTQVIILAPVRELAKQIYDVVKGIGQYL-NIEAFCCIGGTSTQETREKCKQGVHI 177

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           ++ +PGR+  M+K KYL+   +RL ++DEAD++++ GF ++   I   +P   Q+ + SA
Sbjct: 178 IIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFAEILKMVPGDIQIALFSA 237

Query: 201 TYSHDNLATLQKYMVD---PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           T+  + +   ++++ D    +L++ E  T  L G++Q    I +          E++K  
Sbjct: 238 TFPQEIIELSKQFLRDGTAKILVKKEQLT--LEGIRQFYIAIQQ----------EDQKFK 285

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            LV+L      +Q ++F N +   + + + L    F    +    +QK R   +  FK+G
Sbjct: 286 VLVELYKNLTVSQSILFCNSKKTVDDLYDKLTAEGFTVSKIHSQMEQKEREQVMQEFKKG 345

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
             RILV+TDL  RGID   + LVIN E P     Y+HR+GRAGRYG +G+ I +V+ +
Sbjct: 346 AARILVSTDLMGRGIDVQQLSLVINYEFPRLKEQYIHRVGRAGRYGRKGVAINMVAQQ 403


>gi|356507010|ref|XP_003522265.1| PREDICTED: eukaryotic initiation factor 4A-11-like [Glycine max]
          Length = 413

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 127/370 (34%), Positives = 192/370 (51%), Gaps = 29/370 (7%)

Query: 19  DVLFENDVLIEKPIRQGLQEN--------GFVKESPIQMAAFPYVLNGYDAIVQSKSGTG 70
           D     D + E     GLQEN        GF K S IQ         G D I Q++SGTG
Sbjct: 30  DFFTSYDEVCESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTG 89

Query: 71  KSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ 130
           K+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  + V   +GGT 
Sbjct: 90  KTATFCSGVLQQL-DYSLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTS 147

Query: 131 VERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIY 186
           V   +R     V +VVG+PGR+  M++ + L  D++R+F++DEAD++++ GF + I  I+
Sbjct: 148 VREDQRILSSGVHVVVGTPGRVFDMLRRQSLRSDNIRMFVLDEADEMLSRGFKDQIYDIF 207

Query: 187 SQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPS 246
             LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ            
Sbjct: 208 QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFFV--------- 258

Query: 247 LRYVDEE----KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              VD+E    + L  L       Q VIF N + + + + + + + +       G  DQ 
Sbjct: 259 --NVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN 316

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +
Sbjct: 317 TRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRK 376

Query: 363 GLVITIVSAE 372
           G+ I  V+ +
Sbjct: 377 GVAINFVTGD 386


>gi|399155306|ref|ZP_10755373.1| Cold-shock DEAD box protein A-like protein [SAR324 cluster
           bacterium SCGC AAA001-C10]
          Length = 627

 Score =  199 bits (505), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 144/508 (28%), Positives = 248/508 (48%), Gaps = 28/508 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           ++  +++ L E G+   +PIQ    P +L   D + Q+++GTGK+  F +  L+ L  L 
Sbjct: 10  LKPALQKSLDEVGYETPTPIQKQTIPLMLEKKDVLGQAQTGTGKTAAFALPLLSNL-NLR 68

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
            + PQ ++LAPTRE+A+Q+ +  +   +H+K+ HV    GG     Q+   KR   +VVG
Sbjct: 69  QKDPQVLVLAPTRELAIQVAEAFKKYASHMKSFHVLPIYGGQEYSGQIRGLKRGSHVVVG 128

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   ++   L +D +   ++DEAD+++  GF++D+ WI  Q P  +Q+ + SAT  
Sbjct: 129 TPGRVMDHMRRGTLKLDKLSTLVLDEADEMLRMGFIDDVEWILEQTPKERQIALFSATMP 188

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
           H       +Y+ DP+ I  +D T     ++Q    +       +  +D    L ++L   
Sbjct: 189 HQIRRIATRYLKDPVEIIIKDKTTTAPTIRQRFWPVS-----GMHKLD---ALTRILEAE 240

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
           PF   +IF   +     +   L    + +  L+G   Q  R  S++S K GK+ ILV TD
Sbjct: 241 PFEAILIFVRTKTATVELSAKLEARGYASTPLNGDIKQNQRERSIESLKSGKLDILVATD 300

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGE 383
           +AARG+D   +  VIN +IPHD   Y+HR+GR GR G +G  I  V+       H++  E
Sbjct: 301 VAARGLDVERITHVINYDIPHDTEGYVHRIGRTGRAGRQGDAILFVAPREKSMLHAI--E 358

Query: 384 INLDHAFNVGLVPDN-LTGDQ--INWTQRVQTLLAKPLDQAQEREDVEQTAEESSKVENT 440
              +    +  +P   L  DQ    + QR+   LA     ++E     Q  E+  +  N 
Sbjct: 359 RATNQKIEIMELPSTELINDQRMAKFKQRITDTLA-----SEELGLFYQMIEQYQQEHNV 413

Query: 441 KPLRGAPSKEVTKKGASK---EGTKWNLTDGQSEEESDSE-NDGKPDENGSQRGSKRSK- 495
             L  A +  +  +G +    +    +  + +S +  +++   G+  + G +RG  R K 
Sbjct: 414 PVLEIAAALGLLLQGETPLMLQAKSHHFKEDKSWQNDETKPRKGRGGDRGKERGRMRDKV 473

Query: 496 EFKTQEKCVKGAGEDENGDRKASKDEQK 523
             K Q++  K     E  D+   KD+ +
Sbjct: 474 RGKDQDRSPKKEFTLEKRDKVRGKDQDR 501


>gi|169633001|ref|YP_001706737.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii SDF]
 gi|169151793|emb|CAP00614.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii]
          Length = 383

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 111/354 (31%), Positives = 200/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PVQ+ 
Sbjct: 14  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPVQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    +S+     NLH+   +GG   ++ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAKSL-TKFSNLHLVTLLGGVDFDKQKKQLDANFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 133 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ + L  
Sbjct: 193 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAK--------QDKYRLLQD 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  L+ FK+GK  I
Sbjct: 245 ILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVEGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|310800761|gb|EFQ35654.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
          Length = 530

 Score =  198 bits (504), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/367 (36%), Positives = 197/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FEN  L ++ +  G+ E GF + SPIQ  A P  L G D + ++K+GT
Sbjct: 37  QTEDVTNTKGLEFENFQL-KRDLLMGIFEAGFERPSPIQEEAIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL K I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 96  GKTAAFVIPALEK-INPKVSKIQALILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 153

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 154 GLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECSMFIMDEADKLLSIEFTPVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A        
Sbjct: 214 LQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 265 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQ 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 322 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 381

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 382 GLAINLI 388


>gi|401839441|gb|EJT42668.1| FAL1-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 399

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 125/377 (33%), Positives = 202/377 (53%), Gaps = 28/377 (7%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           +G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L + I L     Q 
Sbjct: 36  RGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL-QAIDLKRMDLQA 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQIVVGSPGRI 148
           +IL+PTRE+A QI  VV ++G ++ N++     GG  ++       K   Q++ G+PGR+
Sbjct: 95  LILSPTRELASQIGQVVTNLGDYM-NVNAFAMTGGKTLKDDLKKIQKNGCQVISGTPGRV 153

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
             MIK + L   +VR+ I+DEAD+L++   GF + I  I+++LP   Q++VVSAT + D 
Sbjct: 154 LDMIKRQMLQTRNVRMLILDEADELLSETLGFKQQIYDIFTKLPKNCQVVVVSATMNKDI 213

Query: 207 LATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLVQLLSQ 262
           L   +K++ DP+ I  +     L G+KQ +             VD+E      L  +   
Sbjct: 214 LEVTRKFLNDPVKILVKRDEISLEGIKQYIV-----------NVDKEDWKFDTLCDIYDS 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               QCVIF N + + + + + L  +NF    + G   Q+ R   ++ F+ G  R+L++T
Sbjct: 263 LTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++     K      
Sbjct: 323 DVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITRADSTKLR---- 378

Query: 383 EINLDHAFNVGLVPDNL 399
           EI   ++  + L+P N 
Sbjct: 379 EIEKFYSIKIKLMPANF 395


>gi|283457687|ref|YP_003362273.1| superfamily II DNA and RNA helicase [Rothia mucilaginosa DY-18]
 gi|283133688|dbj|BAI64453.1| superfamily II DNA and RNA helicase [Rothia mucilaginosa DY-18]
          Length = 574

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 124/369 (33%), Positives = 201/369 (54%), Gaps = 25/369 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  + + I   L   G     PIQ    P  L+G D I Q+K+GTGK++ F +  + +++
Sbjct: 18  DFGVRQDISDALAAVGITSPFPIQELTLPVALSGQDIIGQAKTGTGKTLGFGLPTIQRVV 77

Query: 85  KLPVQ---------QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QV 131
               +          PQ +IL PTRE+A+Q+ + + ++ A ++N  V    GG     Q 
Sbjct: 78  GRDDEGWADLEYPGAPQALILVPTRELAIQVGEDL-AIAAKLRNARVATLYGGVPIEPQA 136

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           E  +R +++VVG+PGRI  + +  +LN+  V++ ++DEAD++++ GF   +  I S LP 
Sbjct: 137 ELLRRGLEVVVGTPGRIIDLYQQGFLNLKQVKIVVLDEADEMLDLGFQPSVEKILSYLPE 196

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIR---PEDATRPLLGVKQLVALIPECKNPSLR 248
            +Q ++ SAT     +A  ++YM  P+ I    PEDA++    ++Q+V            
Sbjct: 197 DRQSMLFSATMPGPVIAMARQYMTKPMRISAADPEDASKTKASIRQVVY--------RAH 248

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           ++D+++ + ++L  T   + VIF+  +     + E L N  F A  L G  +Q AR  +L
Sbjct: 249 HLDKDEMIGRILRATGRGRTVIFTKTKRDAARVAEELVNRGFAAAPLHGDLNQVAREQAL 308

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
            +F+ GKV ILV TD+AARGID  +V  VIN  +P D  TYLHR GR GR G  G  +T+
Sbjct: 309 KAFRTGKVDILVATDVAARGIDVEDVTHVINHRVPEDEKTYLHRTGRTGRAGNEGTAVTL 368

Query: 369 VSAESLVKF 377
           V  + L ++
Sbjct: 369 VDWDDLPRW 377


>gi|209876956|ref|XP_002139920.1| ATP-dependent RNA helicase [Cryptosporidium muris RN66]
 gi|209555526|gb|EEA05571.1| ATP-dependent RNA helicase, putative [Cryptosporidium muris RN66]
          Length = 406

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 127/385 (32%), Positives = 197/385 (51%), Gaps = 22/385 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T DV       FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 23  KTDDVTKTKGSDFE-DYFLKRELLMGIYEKGFERPSPIQEESIPVALAGKDILARAKNGT 81

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L K I       Q +IL PTRE+A+Q + +V+ +G H+ ++      GGT
Sbjct: 82  GKTAAFVIPLLEK-INTKKNTIQGLILVPTRELALQTSSIVKQLGKHI-SVQCMVSTGGT 139

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            +     R   PV ++VG+PGR+  +   K  N+    +FIMDEADKL++  F   I  +
Sbjct: 140 SLRDDILRLNNPVHVLVGTPGRVLDLANKKVCNLSGCFMFIMDEADKLLSPEFQPIIEEL 199

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+ +   I   D    L GV Q  A        
Sbjct: 200 IEFLPKERQILLYSATFPVTVKGFKDKYLSNAHEINLMDEL-TLKGVTQYYA-------- 250

Query: 246 SLRYVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++KL     L  +   NQ +IF N   R E++ + +        Y+     Q 
Sbjct: 251 ---FVEEKQKLHCLNTLFCKLQINQAIIFCNSVARVELLAKKITELGSSCFYIHARMLQS 307

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV++DL  RGID  +V++VIN + P  + TYLHR+GR+GR+G  
Sbjct: 308 HRNRVFHDFRNGACRCLVSSDLITRGIDIQSVNVVINFDFPKYSETYLHRIGRSGRFGHL 367

Query: 363 GLVITIVSAESLVKFHSLMGEINLD 387
           GL I +++ E     + +  E+N +
Sbjct: 368 GLAINLITYEDRYNLYRIEKELNTE 392


>gi|254482185|ref|ZP_05095426.1| DbpA RNA binding domain family protein [marine gamma
           proteobacterium HTCC2148]
 gi|214037510|gb|EEB78176.1| DbpA RNA binding domain family protein [marine gamma
           proteobacterium HTCC2148]
          Length = 618

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 111/346 (32%), Positives = 197/346 (56%), Gaps = 13/346 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           ++ + +P+++ L + G+   S IQ A  P ++ G D + Q+++GTGK+  F +  L +L 
Sbjct: 12  ELALSEPLQKALADVGYETPSAIQAATIPALIEGRDVLGQAQTGTGKTAAFALPILAQL- 70

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
           +   ++PQ ++LAPTRE+A+Q+ +  +    ++K+ HV    GG     Q+ + +R VQ+
Sbjct: 71  QASSKKPQVLVLAPTRELAIQVAEAFQKYARYLKDFHVVPIYGGADYRGQLRQLQRGVQV 130

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++   L++ ++R  ++DEAD+++  GF++D+ WI  Q P  +Q+ + SA
Sbjct: 131 VVGTPGRVMDHMRRGSLDLSALRTLVLDEADEMLRMGFIDDVEWILEQTPDDRQIALFSA 190

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T         ++++ +P+ +  E  T     ++Q V ++          V +   L ++L
Sbjct: 191 TMPTAIARIAKQHLNNPVHVAIEVQTMTNKSIRQRVWMMAG--------VHKLDALTRIL 242

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
               F+  ++F   ++    I E LA   + A  L+G   QK R A++D+ KRG + ILV
Sbjct: 243 EVEDFDGVIVFVRTRIATAEIAEKLAARGYSAAALNGDIPQKQREATIDNLKRGTIDILV 302

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVI 366
            TD+AARG+D   +  VIN +IP+D   Y+HR+GR GR G  G  I
Sbjct: 303 ATDVAARGLDVERISHVINYDIPYDVEAYVHRIGRTGRAGREGDAI 348


>gi|403717110|ref|ZP_10942499.1| putative ATP-dependent RNA helicase, partial [Kineosphaera limosa
           NBRC 100340]
 gi|403209372|dbj|GAB97182.1| putative ATP-dependent RNA helicase, partial [Kineosphaera limosa
           NBRC 100340]
          Length = 479

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 133/386 (34%), Positives = 207/386 (53%), Gaps = 25/386 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  +   I   L   G V   PIQ    P  L G+D I Q+K+GTGK++ F V  LNK++
Sbjct: 37  DFGVHPDIVAALAGAGIVHPFPIQAMTAPVALTGHDIIGQAKTGTGKTLGFGVPLLNKVV 96

Query: 85  --------KLP-VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQV 131
                    LP   +PQ +++ PTRE+  Q+T  +++ G   + + V+   GG     Q+
Sbjct: 97  APGDESFESLPHPGRPQALVVVPTRELCTQVTGDLKTAGKK-RGIRVESIYGGRAFEPQI 155

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           E  +R V+++VG+PGR+  + K  +L + +VR  ++DEAD++++ GF+ D+  I +Q P 
Sbjct: 156 EALRRGVEVIVGTPGRLIDLNKQGHLALSNVRTVVLDEADEMLDLGFLPDVEKILAQTPA 215

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
            +Q ++ SAT     +A  ++YM  P  IR   A       +Q VA I +    +   +D
Sbjct: 216 SRQTMLFSATMPGAVVALARRYMTQPTHIR---AVSDAGDDRQTVAAIEQFVYRA-HAMD 271

Query: 252 EEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
           + + L ++L        +IFS  +     + + L +  F A  + G   Q AR  +L +F
Sbjct: 272 KVELLSRVLQAKGRGLTIIFSRTKRTAAKVADELVDRGFAAAAIHGDLGQGAREQALRAF 331

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           + GKV ILV TD+AARGID  NV  V+N + P D  TYLHR GR GR G  G+ IT+V  
Sbjct: 332 RNGKVDILVATDVAARGIDVPNVTHVVNYQCPEDEKTYLHRTGRTGRAGLTGVAITLVDW 391

Query: 372 ESLVKFHSLMGEINLDHAFNVGLVPD 397
           + L ++    G IN   A ++G +PD
Sbjct: 392 DDLPRW----GLIN--KALDLG-IPD 410


>gi|290989740|ref|XP_002677495.1| dead box ATP-dependent RNA helicase [Naegleria gruberi]
 gi|284091103|gb|EFC44751.1| dead box ATP-dependent RNA helicase [Naegleria gruberi]
          Length = 618

 Score =  198 bits (504), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 194/364 (53%), Gaps = 21/364 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ +  G+ E GF + SPIQ    P  L G D + ++K+GTGK+  F++  L + +   
Sbjct: 251 LKRELLMGIFEKGFERPSPIQEQTVPLALFGRDILARAKNGTGKTAAFIIPCLER-VDTS 309

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE----RPKRPVQIVVG 143
             Q Q +IL PTRE+A+Q + V + +G ++ N+ V    GGT ++    R  +PV I+VG
Sbjct: 310 KNQIQILILVPTRELALQTSHVCKEIGKYL-NVEVMVTTGGTSLKDDIVRLYKPVHILVG 368

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGRI  +      N+++V + +MDEADKL++  FV  I  + S +PP +Q+L+ SAT+ 
Sbjct: 369 TPGRIIDLASKGVANLNNVSMLVMDEADKLLSPEFVPLIEKLISFVPPSRQILLFSATFP 428

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
                   K++  P  I   D    L GV Q  A           +V+E +K   L  L 
Sbjct: 429 ITVKDFRDKWLTKPYEINLMDELT-LKGVTQYYA-----------FVEERQKVHCLNTLF 476

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
           S+   NQ +IF N   R E++ + +    +   Y+     Q  R      F+ G  R LV
Sbjct: 477 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMPQDLRNRVFHDFRNGACRNLV 536

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           ++DL  RGID   V++VIN + P ++ TYLHR+GR+GRYG  GL I  V+ E     + +
Sbjct: 537 SSDLFTRGIDIQAVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINFVTYEDRFNLYKI 596

Query: 381 MGEI 384
             E+
Sbjct: 597 EQEL 600


>gi|325964224|ref|YP_004242130.1| DNA/RNA helicase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470311|gb|ADX73996.1| DNA/RNA helicase, superfamily II [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 710

 Score =  198 bits (504), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 193/357 (54%), Gaps = 21/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ I+  +   LQ+ G+ K SPIQ A  P +L G D +  +++GTGK+  F V AL++L 
Sbjct: 71  DLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQTGTGKTAAFAVPALSRLA 130

Query: 85  KL-----PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPK 135
           +L     P ++ Q ++LAPTRE+A+Q+ +   S   H+ +  V    GG+    Q+   +
Sbjct: 131 ELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTVLPVYGGSAYGPQLAGLR 190

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
           R  Q+VVG+PGR+   I    L++  ++  ++DEAD+++  GF ED+  I+ Q P  +Q+
Sbjct: 191 RGAQVVVGTPGRVIDHISKGSLDLSELQYLVLDEADEMLRMGFAEDVEQIFQQTPSDRQV 250

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQ--LVALIPECKNPSLRYVDEE 253
            + SAT         ++Y+ +P  I  +  T      +Q  L  + P   +   R ++ E
Sbjct: 251 ALFSATMPSQIRRMSKQYLNNPAEISVKSKTTTGANTRQRYLQVMGPHKLDAMTRILEVE 310

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
           +          F+  + F   ++  E + + L +  F A  ++G   Q+ R  ++D+ K 
Sbjct: 311 E----------FDGVIAFVRTKMATEDLADKLKSRGFQAAAINGDIPQQQRERTVDALKE 360

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           G++ ILV TD+AARG+D   +  VIN +IPHD  +Y+HR+GR GR G  G  I  ++
Sbjct: 361 GRIDILVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAGRSGDAILFMT 417


>gi|170025939|ref|YP_001722444.1| ATP-dependent RNA helicase DeaD [Yersinia pseudotuberculosis YPIII]
 gi|169752473|gb|ACA69991.1| DEAD/DEAH box helicase domain protein [Yersinia pseudotuberculosis
           YPIII]
          Length = 664

 Score =  198 bits (504), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 190/352 (53%), Gaps = 18/352 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  PI   L + G+ K SPIQ+   P++LNG D +  +++G+GK+  F +  L+  I
Sbjct: 11  DLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAAFGLPLLHN-I 69

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQI 140
           K  ++ PQ ++LAPTRE+AVQ+ + + S   H+  + V    GG     Q+   ++  Q+
Sbjct: 70  KADLKSPQVLVLAPTRELAVQVAEALSSFSKHINGVKVVALYGGQRYDVQLRALRQGPQV 129

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   +K   LN+ ++   ++DEAD+++  GF+ED+  I +Q+P   Q  + SA
Sbjct: 130 VVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPAEHQTALFSA 189

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T         +++M +P  +R          ++  V   P+      R     +K   LV
Sbjct: 190 TMPEAIRRITRRFMKEPQEVR----------IQSSVTTRPDISQSYWRVGGGYRKNEALV 239

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           + L    F+  +IF   +     + E L  + + +  L+G  +Q  R  +L+  K G++ 
Sbjct: 240 RFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLD 299

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           IL+ TD+AARG+D   + LV+N +IP D+ +Y+HR+GR GR G  G  +  V
Sbjct: 300 ILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFV 351


>gi|350533075|ref|ZP_08912016.1| ATP-dependent RNA helicase DeaD [Vibrio rotiferianus DAT722]
          Length = 639

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLNQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLRDPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|389626723|ref|XP_003711015.1| ATP-dependent RNA helicase eIF4A [Magnaporthe oryzae 70-15]
 gi|152032534|sp|A4QVP2.1|IF4A_MAGO7 RecName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=Translation initiation factor 1
 gi|351650544|gb|EHA58403.1| ATP-dependent RNA helicase eIF4A [Magnaporthe oryzae 70-15]
 gi|440476102|gb|ELQ44735.1| ATP-dependent RNA helicase eIF4A [Magnaporthe oryzae Y34]
 gi|440481099|gb|ELQ61719.1| ATP-dependent RNA helicase eIF4A [Magnaporthe oryzae P131]
          Length = 396

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 132/383 (34%), Positives = 211/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 85  IDTNVKQCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALQDGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  D +++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|424043805|ref|ZP_17781428.1| cold-shock DEAD box protein A [Vibrio cholerae HENC-03]
 gi|408888334|gb|EKM26795.1| cold-shock DEAD box protein A [Vibrio cholerae HENC-03]
          Length = 644

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 115/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLDQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ +P+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLREPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|269962576|ref|ZP_06176923.1| ATP-dependent RNA helicase DeaD [Vibrio harveyi 1DA3]
 gi|269832689|gb|EEZ86801.1| ATP-dependent RNA helicase DeaD [Vibrio harveyi 1DA3]
          Length = 644

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 115/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLDQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKNGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ +P+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLREPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|238917309|ref|YP_002930826.1| ATP-dependent RNA helicase DeaD [Eubacterium eligens ATCC 27750]
 gi|238872669|gb|ACR72379.1| ATP-dependent RNA helicase DeaD [Eubacterium eligens ATCC 27750]
          Length = 571

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 118/361 (32%), Positives = 201/361 (55%), Gaps = 13/361 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ I++ I + +++ GF + SPIQ  A P VL G D I Q+++GTGK+  + +  L K 
Sbjct: 4   DELNIDERILRAVEDMGFEETSPIQTQAIPAVLEGIDVIGQAQTGTGKTAAYSIPMLQK- 62

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQ 139
           I   V++PQ I+L PTRE+AVQ+ + +R +  ++ ++ V    GG ++ R     K  VQ
Sbjct: 63  INPDVKKPQAIVLCPTRELAVQVAEEIRKLAKYMSDIKVLPVYGGQEIVRQIKSLKAGVQ 122

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           I+VG+PGR+   ++ K +  DSV + I+DEAD++++ GF ED+  I ++ P  +Q ++ S
Sbjct: 123 IIVGTPGRVMDHMRRKTVKFDSVSMVILDEADEMLDMGFREDMETILTETPEERQTVLFS 182

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +   +K+  D  +I+     R  L V  +     E     +R  ++ + L +L
Sbjct: 183 ATMPKPIMEIARKFQKDARIIK---VVRKELTVSNIDQFYYE-----VRPKNKTEILSRL 234

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           +        V+F N + + + +   L    + A+ + G   Q+ R   +D F+ GK  IL
Sbjct: 235 IDIYNPKLSVVFCNTKRQVDELISELKGRGYFADGIHGDMKQQQRDRVMDDFRSGKTEIL 294

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           + TD+AARGID   VD+V N ++P D   Y+HR+GR GR G  GL ++ +S   + K   
Sbjct: 295 IATDVAARGIDVDGVDIVFNYDLPQDEEYYVHRIGRTGRAGKSGLALSFISGREVYKLKD 354

Query: 380 L 380
           +
Sbjct: 355 I 355


>gi|444426564|ref|ZP_21221977.1| Cold-shock DEAD-box protein A [Vibrio campbellii CAIM 519 = NBRC
           15631]
 gi|444240216|gb|ELU51762.1| Cold-shock DEAD-box protein A [Vibrio campbellii CAIM 519 = NBRC
           15631]
          Length = 639

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLGQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLRDPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|388598566|ref|ZP_10156962.1| ATP-dependent RNA helicase DeaD [Vibrio campbellii DS40M4]
          Length = 641

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 198/355 (55%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +   I   L   GFV  +PIQ AA P++L G DA+ ++++GTGK+  F +  LNKL
Sbjct: 9   SDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKAQTGTGKTAAFSLPLLNKL 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
             L  ++PQ I+LAPTRE+A+Q+   ++++G ++K L V    GG     Q+   K    
Sbjct: 69  -DLGQRKPQAIVLAPTRELAIQVAAEMKNLGKNIKGLKVLEIYGGASIVDQMRALKSGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ +I  + L++D V  F++DEAD+++N GFV+D+T I    P   Q ++ S
Sbjct: 128 VVVGTPGRVQDLINRERLHLDEVNTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        +++++ DP+ +        +  V+Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMLKNIVERFLRDPVTVDVAGKNHTVDKVQQQFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|398313029|emb|CCI88204.1| ATP-dependent RNA helicase, partial [Saccharomyces bayanus]
          Length = 390

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 127/370 (34%), Positives = 201/370 (54%), Gaps = 25/370 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L 
Sbjct: 16  FESMDLKEDLLR-GIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL- 73

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKR 136
           + I L  +  Q +IL+PTRE+A QI  VV ++G ++ N++     GG  ++       K 
Sbjct: 74  QAIDLKKKDLQALILSPTRELANQIGQVVTNLGDYM-NVNAFAMTGGKTLKDDLKKLQKN 132

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQ 194
             Q+V G+PGR+  MIK + L   +V++ I+DEAD+L++   GF + I  I+++LP   Q
Sbjct: 133 GCQVVSGTPGRVLDMIKRQMLQTRNVQVLILDEADELLSETLGFKQQIYDIFAKLPKNCQ 192

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
           ++VVSAT + D L   +K+M DP+ I  +     L G+KQ V             VD+E 
Sbjct: 193 VVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKED 241

Query: 255 ----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  +       QCVIF N + + + + + L  +NF    + G   Q+ R   ++ 
Sbjct: 242 WKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMND 301

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           F+ G  R+L++TD+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++
Sbjct: 302 FRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFIT 361

Query: 371 AESLVKFHSL 380
                K   +
Sbjct: 362 KTDSAKLREI 371


>gi|400599338|gb|EJP67042.1| eIF4A-like protein [Beauveria bassiana ARSEF 2860]
          Length = 397

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 133/383 (34%), Positives = 212/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 27  DDMNLKSELLRGIYAYGFERPSAIQSRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQK- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 86  IDPAVKQCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALQDGPQ 144

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  DS+++F++DEAD++++ GF + I  I+  LP   Q++++S
Sbjct: 145 VVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTDQIYDIFQLLPQSTQVVLLS 204

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    ++M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 205 ATMPQDVLEVTTRFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 254

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 255 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 314

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+AE +  
Sbjct: 315 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTAEDV-- 372

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 373 --RMMREIEQFYSTQIEEMPMNV 393


>gi|357406358|ref|YP_004918282.1| Cold-shock DEAD box protein A-like protein [Methylomicrobium
           alcaliphilum 20Z]
 gi|351719023|emb|CCE24697.1| Cold-shock DEAD box protein A homolog [Methylomicrobium
           alcaliphilum 20Z]
          Length = 578

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 151/537 (28%), Positives = 250/537 (46%), Gaps = 48/537 (8%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           F    LIE P+ + L + G+   SPIQ    PY++ G D + Q+++GTGK+  F +  L+
Sbjct: 11  FRELTLIE-PVLKALDDVGYESPSPIQAQTIPYLMQGKDVLGQAQTGTGKTAAFALPILS 69

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRP 137
           +L  L   +PQ ++LAPTRE+A+Q+ +  +   AH+K  HV    GG    TQ+ + KR 
Sbjct: 70  RL-DLKKTEPQVLVLAPTRELAIQVAEAFQRYAAHLKGFHVLPIYGGQDYTTQLRQLKRG 128

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
             ++VG+PGR+   ++   L +  +   ++DEAD+++  GF++D+ WI  Q P  +Q+ +
Sbjct: 129 PHVIVGTPGRVMDHMRKGTLRLGELSCLVLDEADEMLRMGFIDDVEWILEQTPKQRQIAL 188

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
            SAT         Q Y+ DP  I  +  T     ++Q   L+          V +   L 
Sbjct: 189 FSATMPAPIRKIAQTYLHDPEEITVKVRTSTAETIRQRYWLVSG--------VHKLDALT 240

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           ++L    F+  +IF   +     + E L    + A  ++G   Q  R  ++   K GK+ 
Sbjct: 241 RILESETFDGIIIFVRTKTATVELAEKLEARGYSAAAINGDMSQVLRERTIAHLKNGKLD 300

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           IL+ TD+AARG+D   V  VIN +IP+D   Y+HR+GR GR G  G  I  V+     + 
Sbjct: 301 ILIATDVAARGLDVERVSHVINYDIPYDTEAYIHRIGRTGRAGRTGDAILFVAPRER-RL 359

Query: 378 HSLMGEINLDHAFNVGLVPDNLTGDQ--INWTQRVQTLLA--------KPLDQAQEREDV 427
            S + +        +GL    +  ++    + QR+   LA        + ++Q Q   +V
Sbjct: 360 LSNIEKATRQKVEEMGLPSTEIINNKRIARFKQRITDTLAAEELSFFIQLMEQYQNEHNV 419

Query: 428 ---EQTAEESSKVENTKPL--RGAPSKEVTKKGASKEGTKWNLTDGQSEEESDSENDGKP 482
              E  A  + +V+   PL  +  P KE  ++                 E  DS +    
Sbjct: 420 SAIEIAAALAKQVQGETPLLMKNPPKKETERR-----------------ERKDSIDREYG 462

Query: 483 DENGSQRGSKRSKEFKTQEKCV-KGAGEDENGDRKASKDEQKIDGANSAEKSLEDKH 538
            E  S+R +    E +T    V K  G        A  +E  +DG + A   +E+ +
Sbjct: 463 KERKSKRKTNPDIEMETYRIEVGKAHGVKPGNIVGAIANETGLDGDHIARIKIEENY 519


>gi|347359736|ref|YP_386648.2| DEAD/DEAH box helicase [Desulfovibrio alaskensis G20]
 gi|342906268|gb|ABB36953.2| DEAD/DEAH box helicase domain protein [Desulfovibrio alaskensis
           G20]
          Length = 528

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 111/367 (30%), Positives = 203/367 (55%), Gaps = 13/367 (3%)

Query: 18  IDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVV 77
           ++ L   D+ + K + + +Q+ GF + SPIQ  + P++L G D + Q+++GTGK+  F +
Sbjct: 2   VEKLLFADLPLSKEVLRAIQDMGFEEASPIQTMSIPHILAGKDVVGQAQTGTGKTAAFGI 61

Query: 78  AALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP--- 134
             L + I    +  Q ++L PTRE+A+Q+ + V ++  H + + V    GG  +ER    
Sbjct: 62  PILER-IDPRDKATQAVVLCPTRELAIQVAEEVTTLARHKRGISVVPVYGGQPIERQVRA 120

Query: 135 -KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMK 193
            +R  Q++VG+PGR+   +    +++++V++ ++DEAD++++ GF +DI +I  ++    
Sbjct: 121 LRRGAQVIVGTPGRVMDHLDRGTMDINTVKMVVLDEADEMLDMGFRDDIEFILGKMEQEV 180

Query: 194 QMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEE 253
           Q +  SAT     L   Q+Y+ +P  ++    T+ LL V  +  +  E     +R   + 
Sbjct: 181 QTVFFSATMPRAILDMAQRYLKEPEFLK---VTQKLLTVPSIEQIYFE-----VRPFQKL 232

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
           + L ++L        ++F + ++  + +  NL    + A+ L G  +Q  R   ++ F++
Sbjct: 233 ESLCRVLDVYNPKLTIVFCSTKVGVDELATNLQARGYDADGLHGNLNQAQRDRVMNRFRK 292

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G + ILV TD+AARGID  NV+ V+N +IP+D  +Y+HR+GR GR G  G   T VS   
Sbjct: 293 GNIDILVATDVAARGIDVENVEAVVNYDIPNDVESYVHRIGRTGRAGRAGRAFTFVSGRE 352

Query: 374 LVKFHSL 380
             K   +
Sbjct: 353 FYKLRDI 359


>gi|322700752|gb|EFY92505.1| ATP-dependent RNA helicase DHH1 [Metarhizium acridum CQMa 102]
          Length = 502

 Score =  198 bits (504), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/367 (36%), Positives = 196/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV     + FEN  L ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 39  QTEDVTKTKGLEFENFAL-KRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGT 97

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL + I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 98  GKTAAFVIPALER-INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 155

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 156 GLRDDILRLQDPVHIVVGTPGRILDLAGKSVADLSECPMFIMDEADKLLSIEFTPVIEQL 215

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A        
Sbjct: 216 LQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA-------- 266

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 267 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQ 323

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 324 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 383

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 384 GLAINLI 390


>gi|94501919|ref|ZP_01308429.1| DEAD/DEAH box helicase-like protein [Oceanobacter sp. RED65]
 gi|94425972|gb|EAT10970.1| DEAD/DEAH box helicase-like protein [Oceanobacter sp. RED65]
          Length = 614

 Score =  198 bits (504), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 192/342 (56%), Gaps = 13/342 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + + ++E G+ + SPIQ  + P++L G D +  +++GTGK+  F +  L +  +  V++P
Sbjct: 17  LLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR-TQNEVREP 75

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+A Q+   V S   H  N+ V    GG+    Q    K+  Q VVG+PGR
Sbjct: 76  QVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGTPGR 135

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   I+   L ++ +R  ++DEAD+++  GF++D+ W+  Q+P  +Q+ + SAT      
Sbjct: 136 VMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDDVDWVLDQVPEKRQIALFSATMPKQIK 195

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
           A  +K++ +P  IR +  T     ++Q   L+        + VD+ + L+++   + F+ 
Sbjct: 196 AVAEKHLREPTEIRIKSKTATNESIEQKYWLV--------KGVDKNQALLRICETSEFDA 247

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            ++F   +   E + + + +     E L+G   Q  R  ++D  K+G+V +LV TD+AAR
Sbjct: 248 MMVFVRTKQATEEVADYMRSHGLRCEALNGDVAQAQRERAVDRLKKGQVDMLVATDVAAR 307

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           G+D   +  V+N +IP+DA +Y+HR+GR GR G  G  I  V
Sbjct: 308 GLDVERISHVVNYDIPYDAESYVHRIGRTGRAGRSGEAILFV 349


>gi|408388328|gb|EKJ68014.1| hypothetical protein FPSE_11825 [Fusarium pseudograminearum CS3096]
          Length = 396

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 132/386 (34%), Positives = 212/386 (54%), Gaps = 29/386 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DDMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
           I   ++  Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +    Q
Sbjct: 85  IDTNLKACQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALADGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR++ MI+ ++L  DS+++F++DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVQDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---- 255
           AT   D L    K+M DP+ I  +     L G+KQ              Y+  EK+    
Sbjct: 204 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQF-------------YIAVEKEEWKL 250

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ 
Sbjct: 251 DTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRS 310

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ 
Sbjct: 311 GSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADD 370

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNL 399
           +     ++ EI   ++  V  +P N+
Sbjct: 371 V----RMLREIESFYSTQVDEMPMNV 392


>gi|336312904|ref|ZP_08567849.1| cold-shock DEAD-box protein A [Shewanella sp. HN-41]
 gi|335863516|gb|EGM68660.1| cold-shock DEAD-box protein A [Shewanella sp. HN-41]
          Length = 631

 Score =  198 bits (504), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 193/358 (53%), Gaps = 24/358 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + + L E G+ K +PIQ A+   ++ G D + Q+++GTGK+  F +  LNK+       P
Sbjct: 17  LLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVTS--QTTP 74

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+AVQ+ +   S    +KN HV    GG     Q+   KR  Q++VG+PGR
Sbjct: 75  QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQVIVGTPGR 134

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   L +DS++  ++DEAD+++  GF++DI WI    P  +Q+ + SAT      
Sbjct: 135 VMDHMRRGTLKLDSLKALVLDEADEMLKMGFIDDIEWILEHTPSERQLALFSATMPEQIK 194

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV-----DEEKKLVQLLSQ 262
               +++  P+ +R E +   +  ++Q             R+V     ++ + LV++L  
Sbjct: 195 RVANQHLRSPVHVRIESSQTTVESIEQ-------------RFVQVSQHNKLEALVRVLEV 241

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
                 +IF   +     + E L    + +  L G  +Q+AR  +++  KRGK+ IL+ T
Sbjct: 242 ENTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKRGKLDILIAT 301

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           D+AARG+D   +  V+N +IP+DA  Y+HR+GR GR G  G+ I  V++  +    ++
Sbjct: 302 DVAARGLDVERIGHVVNYDIPYDAEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTI 359


>gi|50302639|ref|XP_451255.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74660701|sp|Q6CXT4.1|IF4A_KLULA RecName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=Translation initiation factor 1
 gi|49640386|emb|CAH02843.1| KLLA0A05731p [Kluyveromyces lactis]
          Length = 396

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 121/338 (35%), Positives = 189/338 (55%), Gaps = 19/338 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   GFV+ S IQ  A   ++ G D + Q++SGTGK+  F +AAL   
Sbjct: 25  DDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQN- 83

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
           I   ++ PQ +ILAPTRE+A+QI  VV ++  H+ ++ V   IGGT ++     +    Q
Sbjct: 84  IDEKIKAPQGLILAPTRELALQIQKVVMALAIHM-DVKVHACIGGTSLQEDSEALRGGAQ 142

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           I+VG+PGR+  MI  +    D++++FI+DEAD++++TGF E I  I++ LPP  Q++++S
Sbjct: 143 IIVGTPGRVFDMIDRRIFKTDNIKMFILDEADEMLSTGFKEQIYNIFTMLPPTSQVVLLS 202

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT   D L    K+M DP+ I  +     L G+ Q    + E          E+ K   L
Sbjct: 203 ATMPGDVLEVTSKFMKDPVRILVKKDELTLEGIGQYYVNVEE----------EQYKYDCL 252

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + E + E L   NF    +     Q+ R   +  F+ G  
Sbjct: 253 TDLYDSISVTQAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQQQERDTIMKEFRSGSS 312

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           RIL++TDL ARGID   V LVIN ++P +   Y+HR+G
Sbjct: 313 RILISTDLLARGIDVQQVSLVINYDLPSNKENYIHRIG 350


>gi|145500870|ref|XP_001436418.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403557|emb|CAK69021.1| unnamed protein product [Paramecium tetraurelia]
          Length = 395

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 123/374 (32%), Positives = 206/374 (55%), Gaps = 26/374 (6%)

Query: 11  TKDVLSNIDVLFEN--DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSG 68
           T+D+  N +   E   ++ + K + +G+   GF + S IQ  A   ++ G D + Q++SG
Sbjct: 5   TQDIQENWNEQVETFEELTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSG 64

Query: 69  TGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG 128
           TGK+  F + AL + I    ++ Q IILAP RE+A QI DVV+ +G ++ N+     IGG
Sbjct: 65  TGKTGTFTIGALQR-IDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYL-NIEAFCCIGG 122

Query: 129 TQV----ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITW 184
           T      E+ K+ V I++ +PGR+  M+K KYL+   +RL ++DEAD++++ GF ++   
Sbjct: 123 TSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFAE 182

Query: 185 IYSQLPPMKQMLVVSATYSHDNLATLQKYMVD---PLLIRPEDATRPLLGVKQLVALIPE 241
           I   +P   Q+ + SAT+  + +   ++++ +    +L++ E  T  L G++Q    I +
Sbjct: 183 ILKMVPGDIQIALFSATFPQEIIELSKQFLREGTAKILVKKEQLT--LEGIRQFYIAIQQ 240

Query: 242 CKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
                     E++K   LV+L      +Q ++F N +   + + + L    F    +   
Sbjct: 241 ----------EDQKFRVLVELYKNLTVSQSILFCNSKKTVDDLHDKLTAEGFTVSKIHSQ 290

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
            +QK R   +  FK+G  RILV+TDL  RGID   + LVIN E P     Y+HR+GRAGR
Sbjct: 291 MEQKEREQVMQEFKKGAARILVSTDLMGRGIDVQQLSLVINYEFPRLKEQYIHRVGRAGR 350

Query: 359 YGTRGLVITIVSAE 372
           YG +G+ I +V+ +
Sbjct: 351 YGRKGVAINMVAQQ 364


>gi|213410166|ref|XP_002175853.1| translation initiation factor eIF4A [Schizosaccharomyces japonicus
           yFS275]
 gi|212003900|gb|EEB09560.1| translation initiation factor eIF4A [Schizosaccharomyces japonicus
           yFS275]
          Length = 392

 Score =  198 bits (504), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 135/386 (34%), Positives = 210/386 (54%), Gaps = 29/386 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   +L   D + Q++SGTGK+  F ++ L K 
Sbjct: 22  DDMGLKPELLRGIYAYGFERPSAIQQRAIVPILGDRDVLAQAQSGTGKTATFSISVLQK- 80

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   ++Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V      +Q    
Sbjct: 81  IDTSLKQCQALILAPTRELAQQIQKVVVALG-DLMNVECHACIGGTLVREDMAALQAGVH 139

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ + L  D+V++F++DEAD++++ GF + I  I+  LPP  Q++++S
Sbjct: 140 VVVGTPGRVHDMIQRRALPTDAVKMFVLDEADEMLSRGFKDQIYDIFQLLPPTSQVVLLS 199

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---- 255
           AT   D L    K+M DP+ I  +     L G+KQ              YV  EK+    
Sbjct: 200 ATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQF-------------YVAVEKEEWKL 246

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + + + E L   +F    + G  DQ  R   +  F+ 
Sbjct: 247 DTLCDLYETITVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDILMHEFRT 306

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  RIL+TTDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V++E 
Sbjct: 307 GSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTSED 366

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNL 399
           +     +M EI   +  ++  +P N+
Sbjct: 367 V----RMMREIEQFYNTHIEEMPMNI 388


>gi|1170511|sp|P41382.1|IF410_TOBAC RecName: Full=Eukaryotic initiation factor 4A-10; Short=eIF-4A-10;
           AltName: Full=ATP-dependent RNA helicase eIF4A-10
 gi|475213|emb|CAA55642.1| translation initiation factor (eIF-4A) [Nicotiana tabacum]
 gi|475216|emb|CAA55641.1| translation initiation factor (eIF-4A) [Nicotiana tabacum]
          Length = 413

 Score =  198 bits (503), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 125/358 (34%), Positives = 193/358 (53%), Gaps = 37/358 (10%)

Query: 35  GLQEN--------GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKL 86
           GLQEN        GF K S IQ         G D I Q++SGTGK+  F    L +L   
Sbjct: 46  GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-DY 104

Query: 87  PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVV 142
            + + Q ++LAPTRE+A QI  V+R++G ++  + V   +GGT V   +R +Q    +VV
Sbjct: 105 SLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQSGVHVVV 163

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+  M++ + L  D +++F++DEAD++++ GF + I  I+  LPP  Q+ V SAT 
Sbjct: 164 GTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATM 223

Query: 203 SHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK----- 255
             + L   +K+M  P  +L++ +D T  L G+KQ              YV+ +K+     
Sbjct: 224 PPEALEITRKFMNKPVRILVKRDDVT--LEGIKQF-------------YVNVDKEEWKLE 268

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + + + +       G  DQ  R   +  F+ G
Sbjct: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 328

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
             R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ +
Sbjct: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKD 386


>gi|225710008|gb|ACO10850.1| ATP-dependent RNA helicase DDX39 [Caligus rogercresseyi]
          Length = 426

 Score =  198 bits (503), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 128/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  I + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L ++ 
Sbjct: 48  DFLLKPEILRAIGDCGFEHPSEVQHECIPQAVLGMDILSQAKSGMGKTAVFVLATLQQM- 106

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++    V  F GG  + + ++ ++    
Sbjct: 107 -EPVDGQVSVLVMCHTRELAFQISKEYERFSKYLPGAKVGVFFGGLAISKDEQVLKSNCP 165

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  +++ K LN+ +V+ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 166 HIVVGTPGRILALVRSKKLNLKNVKHFILDECDKMLEQLDMRRDVQEIFRSTPHEKQVMM 225

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S D     +K+M DP+ +  +D  +  L G++Q            L+  ++ +KL
Sbjct: 226 FSATLSKDVRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYV--------KLKDTEKNRKL 277

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            +LL    FNQ VIF     R   + + L   NF A  +    +Q+ RL+    FK  + 
Sbjct: 278 FELLDVLEFNQVVIFVKSVQRCVALAQLLIEQNFPAIAIHRGMNQEERLSRYQQFKDFQK 337

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D  TYLHR+ RAGR+GT+GL IT VS ES  K
Sbjct: 338 RILVATNLFGRGMDIERVNIVFNYDMPEDTDTYLHRVARAGRFGTKGLAITFVSDESDAK 397

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
               + E+      ++  +PD +
Sbjct: 398 ---TLNEVQDRFEVDITELPDEI 417


>gi|118444591|ref|YP_877094.1| ATP-dependent RNA helicase [Clostridium novyi NT]
 gi|118135047|gb|ABK62091.1| ATP-dependent RNA helicase [Clostridium novyi NT]
          Length = 528

 Score =  198 bits (503), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 124/370 (33%), Positives = 201/370 (54%), Gaps = 24/370 (6%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           + FEN + I   I+  + + GF + SPIQ  A P++L+G D I Q+++GTGK+  F + A
Sbjct: 4   IKFEN-LPISDEIKSAIADMGFEEPSPIQEKAIPFILSGKDIIGQAQTGTGKTAAFGIPA 62

Query: 80  LNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----K 135
           L+  I L  +  Q ++L PTRE+A+Q T  +  +G + K L+V    GG  ++R     K
Sbjct: 63  LDT-IDLNNRNLQIMVLCPTRELAIQATQEITKLGKYKKGLNVLAIYGGQPIDRQIKALK 121

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
           R VQIV+G+PGR+   I  K L  D++++ ++DEAD++++ GF +DI  I   +P  +Q 
Sbjct: 122 RGVQIVIGTPGRVIDHINRKTLKTDNIKMVVLDEADEMLDMGFRDDIETIIQSVPENRQT 181

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           ++ SAT     +   +KY      I+        +  +QL   +P   N   RY++ ++ 
Sbjct: 182 ILFSATMPKAIVELSKKYQTKAEFIK--------VVHRQLT--VP---NIEQRYIEVKEN 228

Query: 256 -----LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L +L+        VIF N + R + +   L +  + AE L G   Q  R   +  
Sbjct: 229 FKIEVLSRLIDMRNPKLSVIFCNTKKRVDEVVSELQSRGYFAEGLHGDMKQPQRDRVMSK 288

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           F+ G + ILV TD+AARGID  +V+ V N ++P D   Y+HR+GR GR G  G+  T V+
Sbjct: 289 FRNGTIEILVATDVAARGIDVDDVEAVFNYDLPQDEEYYVHRIGRTGRAGRSGIAFTFVA 348

Query: 371 AESLVKFHSL 380
            +++ K   +
Sbjct: 349 GKAMRKLRDI 358


>gi|358377701|gb|EHK15384.1| hypothetical protein TRIVIDRAFT_80093 [Trichoderma virens Gv29-8]
          Length = 396

 Score =  198 bits (503), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 212/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DDMNLKSELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 85  IDPAVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVREDMKALQDGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  D++++F++DEAD++++ GF + I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVHDMIQRRFLKTDAMKMFVLDEADEMLSRGFTDQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    ++M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTRFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|156098189|ref|XP_001615127.1| eukaryotic initiation factor [Plasmodium vivax Sal-1]
 gi|148804001|gb|EDL45400.1| eukaryotic initiation factor, putative [Plasmodium vivax]
          Length = 388

 Score =  198 bits (503), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 207/385 (53%), Gaps = 22/385 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FEN + I++ + +G+   GF K S IQ      +L+G D I+QS+SGTGK+ VF V ALN
Sbjct: 17  FEN-IGIDEGLLRGIYAYGFEKPSAIQQRGIKPILSGRDVILQSQSGTGKTCVFAVGALN 75

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF--IGGTQ----VERPK 135
             +   + + Q IIL+PTRE+A Q   V  ++  ++   HV  +  IGG +    ++   
Sbjct: 76  -CVNRNLSETQVIILSPTRELAEQTQKVCLALADYI---HVTIYCCIGGKKMSDDIKALS 131

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
             V I+ G+PGRI  M+ L++L    ++  ++DEAD+++N GF E +  IY  L P  Q+
Sbjct: 132 NGVHIISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQI 191

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           ++ SAT   + L    K+M  P+ I  +     L G+KQ    I   +    +Y    + 
Sbjct: 192 VLSSATLPQEVLEITNKFMHRPVKILVKRDELTLEGIKQFFVSI---EKEQWKY----ET 244

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L  L       Q V+F N +L+ + + + +  ANF    +     Q  R   +  F++ K
Sbjct: 245 LADLYESLTITQAVVFCNTKLKVDWLTKKMQEANFTVCKMHAGMSQSERDDIMLKFRQCK 304

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
            R+L++TD+  RG+D   V LV+N ++P+   +Y+HR+GR+GR+G +G+ I  V  + + 
Sbjct: 305 FRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDI- 363

Query: 376 KFHSLMGEINLDHAFNVGLVPDNLT 400
               ++ +I   ++  +  +P N+T
Sbjct: 364 ---KILRDIEQYYSTQIDEMPMNIT 385


>gi|68071941|ref|XP_677884.1| eukaryotic initiation factor [Plasmodium berghei strain ANKA]
 gi|56498165|emb|CAH98223.1| eukaryotic initiation factor, putative [Plasmodium berghei]
          Length = 390

 Score =  198 bits (503), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 119/379 (31%), Positives = 204/379 (53%), Gaps = 21/379 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I++ + +G+   GF + S IQ      +LNG D I+QS+SGTGK+ VF V ALN  +   
Sbjct: 24  IDEGLLRGIYAYGFDRPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAVGALN-CVNRN 82

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF--IGGTQ----VERPKRPVQIV 141
           + + Q IIL+PTRE+A Q   V  ++  ++   HV  +  IGG +    ++     V I+
Sbjct: 83  LNETQIIILSPTRELAEQTQKVCLALADYI---HVTVYCCIGGKKLSDDIKALNNGVHII 139

Query: 142 VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSAT 201
            G+PGRI  M+ L++L    ++  ++DEAD+++N GF E +  IY  L P  Q+++ SAT
Sbjct: 140 SGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQIVLSSAT 199

Query: 202 YSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLS 261
             H+ L    K+M +P+ I  +     L G+KQ    I   +    +Y    + L  L  
Sbjct: 200 LPHEVLEITNKFMHNPVKILVKRDELTLEGIKQFFISI---EKEQWKY----ETLADLYE 252

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
                Q V+F N +L+ + + + +  +NF    +     Q  R   +  F++ K R+L++
Sbjct: 253 SLTITQAVVFCNTKLKVDWLAKKMQESNFTVCKMHAGMSQSERDDIMLKFRQCKYRVLIS 312

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLM 381
           TD+  RG+D   V LV+N ++P+    Y+HR+GR+GR+G +G+ I  V  + +     ++
Sbjct: 313 TDIWGRGLDVHEVSLVVNYDLPNSRECYIHRIGRSGRFGRKGVAINFVKNDDI----KIL 368

Query: 382 GEINLDHAFNVGLVPDNLT 400
            +I   ++  +  +P N+T
Sbjct: 369 RDIEQFYSTQIDEMPMNIT 387


>gi|354543983|emb|CCE40705.1| hypothetical protein CPAR2_107400 [Candida parapsilosis]
          Length = 399

 Score =  198 bits (503), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 195/352 (55%), Gaps = 18/352 (5%)

Query: 30  KP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPV 88
           KP + +G+   GF   S IQ  A   ++ G D I Q++SGTGK+  F +  L   I    
Sbjct: 34  KPELLKGIYSYGFEAPSAIQSRAIMQIIAGRDTIAQAQSGTGKTATFSIGMLEA-IDSKS 92

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGS 144
           +  Q +IL+PTRE+A+QI +VV+ +G ++ N+H    +GG  V    + +Q    IV G+
Sbjct: 93  KDCQALILSPTRELAIQIQNVVQHLGDYM-NVHTYACVGGKNVGMDIKKLQHGQQIVSGT 151

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  +I+ + L+   +++ I+DEAD+L   GF E I  IY QLP   Q++VVSAT   
Sbjct: 152 PGRVLDVIRRRNLSTRHIKILILDEADELFTKGFKEQIYEIYKQLPSDTQVVVVSATLPP 211

Query: 205 DNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQ 262
           + L    K+  DP  +L++ +D +  L+G+KQ      +C+    ++      L  L   
Sbjct: 212 EVLEMTSKFTTDPVKILVKRDDVS--LVGIKQYYV---QCEQEDWKF----DTLCDLYDN 262

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
               Q VIF N +++   + + +   NF    + G   Q  R + +  F+ G  R+L++T
Sbjct: 263 LTITQAVIFCNTKMKVNWLTDQMRKQNFVVSSMHGDMKQDERDSIMSDFRTGNSRVLIST 322

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           D+ ARGID   + LVIN ++P+D   Y+HR+GR+GR+G +G  I +++   L
Sbjct: 323 DVWARGIDVQQISLVINYDLPNDKENYIHRIGRSGRFGRKGTAINLITKSDL 374


>gi|356526203|ref|XP_003531708.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine
           max]
          Length = 426

 Score =  198 bits (503), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/356 (35%), Positives = 193/356 (54%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 49  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQVD 108

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            +P  Q   ++L  TRE+A QI         ++ ++    F GG  ++  K  ++     
Sbjct: 109 PVP-GQVAALVLCHTRELAYQICHEFERFSTYLPDIKAAVFYGGVNIKVHKELLKNECPH 167

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L + +VR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 168 IVVGTPGRILALARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMF 227

Query: 199 SATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ I  +D A   L G+ Q            L+  ++ +KL 
Sbjct: 228 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLQETEKNRKLN 279

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +  A  Q+ RL     FK GK R
Sbjct: 280 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSAMSQEERLKRYKGFKEGKQR 339

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS+ +
Sbjct: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTA 395


>gi|90416628|ref|ZP_01224559.1| putative ATP-dependent RNA helicase RhlE [gamma proteobacterium
           HTCC2207]
 gi|90331827|gb|EAS47055.1| putative ATP-dependent RNA helicase RhlE [gamma proteobacterium
           HTCC2207]
          Length = 549

 Score =  198 bits (503), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 200/363 (55%), Gaps = 28/363 (7%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  PI + +   G+   SPIQ  A P VL+G D +  +++GTGK+  F +  L  L 
Sbjct: 6   DLGLSAPILKAITAQGYDTPSPIQAKAIPAVLDGRDVMAAAQTGTGKTAGFTLPILQLLS 65

Query: 85  KLPVQQP---QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRP 137
                QP   +T+IL PTRE+A Q+ + V + G H+ +L      GG     Q+ + +R 
Sbjct: 66  AGKRAQPNQVRTLILTPTRELAAQVGESVATYGKHM-SLSSAVVFGGVKINPQMMKLRRG 124

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V ++V +PGR+  +     +    + + ++DEAD++++ GF+ DI  I S LP  +Q L+
Sbjct: 125 VDVLVATPGRLMDLYSQNAVKFTYLEVLVLDEADRMLDMGFIHDIKRIISLLPKRRQNLM 184

Query: 198 VSATYSHDNLATLQKYMV-DPLLI--RPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
            SAT+S D++  L K +V +P+ I   P +AT P +               S+  VD+++
Sbjct: 185 FSATFS-DDIRKLAKGLVHNPIEISVTPRNATAPTV-------------TQSIYTVDKKQ 230

Query: 255 K---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
           K   L +L+    + Q ++F+  +     + ++L      A  + G + Q AR  +L  F
Sbjct: 231 KAGVLTRLIHDNKWGQALVFTKTKHGANKLTKHLEAEGIVAAAIHGNKSQGARTKALAGF 290

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           K G+VRILV TD+AARG+D   +  V+N ++P+ A  Y+HR+GR GR G+ G  I++VSA
Sbjct: 291 KAGEVRILVATDIAARGLDIEQLPQVVNFDLPNVAEDYVHRIGRTGRAGSTGTAISLVSA 350

Query: 372 ESL 374
           + +
Sbjct: 351 DEV 353


>gi|255034017|ref|YP_003084638.1| DEAD/DEAH box helicase [Dyadobacter fermentans DSM 18053]
 gi|254946773|gb|ACT91473.1| DEAD/DEAH box helicase domain protein [Dyadobacter fermentans DSM
           18053]
          Length = 590

 Score =  198 bits (503), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 195/353 (55%), Gaps = 13/353 (3%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I + LQE GF K SPIQ    P VL G D I Q+++GTGK+  F +  L + I       
Sbjct: 18  ILKALQEMGFEKPSPIQAQGIPAVLQGSDVIGQAQTGTGKTAAFGIPVLER-IDTSSNAV 76

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQIVVGSPGR 147
           Q +IL PTRE+AVQ+++ +  +   ++ + ++   GG  ++R     K+ V IVVG+PGR
Sbjct: 77  QALILCPTRELAVQVSEELGRLSKFMRGVRIEAIYGGDSIDRQIRSLKKGVHIVVGTPGR 136

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++ + L  D VR+ ++DEAD++++ GF EDI  I + +P  +Q ++ SAT S   +
Sbjct: 137 VMDHMERRTLKFDEVRMMVLDEADEMLDMGFREDIESILADMPEDRQTILFSATMSKPIM 196

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
           +  ++++ DP LI+     R  L  + +  +  E K P  +     + + +L+       
Sbjct: 197 SITKRFLNDPTLIK---VVRNELTNQNIEQVYFEVK-PQAKV----EVMTRLIDMHHIKS 248

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            ++F N + + + I E+L    + +E + G   Q+ R   +  FK G   ILV TD+AAR
Sbjct: 249 LLVFCNTKRKVDEIVEDLQLRGYASEGIHGDLRQQQRSNVMSKFKAGVTTILVATDVAAR 308

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           GID + +D VIN +IP D   Y+HR+GR GR G  G   ++V+ +   +  S+
Sbjct: 309 GIDVSGLDGVINYDIPMDEEYYVHRIGRTGRAGMSGKAFSLVARDEKYRLKSI 361


>gi|226531524|ref|NP_001148960.1| ATP-dependent RNA helicase dhh1 [Zea mays]
 gi|195623636|gb|ACG33648.1| ATP-dependent RNA helicase dhh1 [Zea mays]
          Length = 517

 Score =  198 bits (503), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 194/370 (52%), Gaps = 22/370 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 133 RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 191

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G H+K + V    GGT
Sbjct: 192 GKTAAFCIPALEK-IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGT 249

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R  +PV ++VG+PGRI  + K     +    + IMDEADKL++  F   I  +
Sbjct: 250 SLKDDIVRLYQPVHLIVGTPGRILDLTKKGVCILKDCSMLIMDEADKLLSPEFQPSIEQL 309

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+  P +I   D    L G+ Q  A        
Sbjct: 310 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELT-LKGITQFYA-------- 360

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 361 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 417

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P ++ TYLHR+GR+GR+G  
Sbjct: 418 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHL 477

Query: 363 GLVITIVSAE 372
           GL + +++ E
Sbjct: 478 GLAVNLITYE 487


>gi|356519355|ref|XP_003528338.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Glycine
           max]
          Length = 426

 Score =  198 bits (503), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/356 (35%), Positives = 193/356 (54%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 49  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQVD 108

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            +P  Q   ++L  TRE+A QI         ++ ++    F GG  ++  K  ++     
Sbjct: 109 PVP-GQVAALVLCHTRELAYQICHEFERFSTYLPDIKAAVFYGGVNIKVHKELLKNECPH 167

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L + +VR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 168 IVVGTPGRILALARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMF 227

Query: 199 SATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ I  +D A   L G+ Q            L+  ++ +KL 
Sbjct: 228 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLQETEKNRKLN 279

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +  A  Q+ RL     FK GK R
Sbjct: 280 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSAMSQEERLKRYKGFKEGKQR 339

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS+ +
Sbjct: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTA 395


>gi|301112965|ref|XP_002998253.1| eukaryotic initiation factor 4A-III, putative [Phytophthora
           infestans T30-4]
 gi|262112547|gb|EEY70599.1| eukaryotic initiation factor 4A-III, putative [Phytophthora
           infestans T30-4]
          Length = 406

 Score =  198 bits (503), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 191/354 (53%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF K S IQ  A    + G D I QS+SGTGK+ VF ++ L  L    
Sbjct: 40  LKEDLLRGIYSYGFEKPSAIQQRAIKPAIQGRDLIAQSQSGTGKTAVFSISILQSL-DTS 98

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
             + Q ++++PTRE+A Q   VV ++G  + N+     IGG  V    R     VQ+V G
Sbjct: 99  SNETQALVVSPTRELAEQTQKVVLALGDFM-NVQCHACIGGKSVGEDIRRLDFGVQVVSG 157

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGRI  MI+ + L   ++++ ++DEAD+++N GF E I  IY  LPP  Q+L+VSAT  
Sbjct: 158 TPGRIFDMIRRRNLRTRNIKMLVIDEADEMLNKGFKEQIYDIYRYLPPSTQVLLVSATMP 217

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            + L   +K+M +P+ +  +     L G+KQ    + +          EE K   L  L 
Sbjct: 218 QEVLDLTRKFMNEPVKVLVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 267

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +  ANF    + G   QK R A +  F+ G  R+L+
Sbjct: 268 DTLTITQAVIFCNTKRKVDWLTSKMREANFTVSAMHGDMPQKERDAIMQEFRSGGSRVLI 327

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+  RG+D   V LVI  ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 328 TTDVWGRGLDVQQVSLVICYDLPNNRELYIHRIGRSGRFGRKGVAINFVKDDDI 381


>gi|156087226|ref|XP_001611020.1| eukaryotic initiation factor 4A-3 (eIF4A-3)  [Babesia bovis T2Bo]
 gi|154798273|gb|EDO07452.1| eukaryotic initiation factor 4A-3 (eIF4A-3) , putative [Babesia
           bovis]
          Length = 395

 Score =  198 bits (503), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 196/352 (55%), Gaps = 25/352 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + I +G+   GF K S +Q  A   +L+G D I+QS+SGTGK+ VF + AL +++   
Sbjct: 29  LREEILKGIFSYGFDKPSAVQQRAIKPILDGRDVIIQSQSGTGKTCVFCLGAL-QIVNPA 87

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
            +Q Q ++L+PTRE+A Q   V  ++G +  N+ V   IGG +V    +     V IV G
Sbjct: 88  SKQTQVLLLSPTRELAEQSQKVCLALGDYC-NVEVHCCIGGKRVSDDIKALESGVHIVSG 146

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  MI  ++LN  +++  I+DEAD+++N GF + +  IY  LPP  Q+++VSAT  
Sbjct: 147 TPGRVNHMIAERHLNTRNIKQMILDEADEMLNRGFKDQVYSIYRYLPPTLQVILVSATLP 206

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LV 257
            + +   +K+M +P  +  +     L G+KQ              +V  EK+      L 
Sbjct: 207 QEVVEITEKFMNNPFRVLVKRDELTLDGIKQF-------------FVAVEKEQWKFDTLC 253

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q V+F N + + + + + + ++NF    + G   QK R   +  F+RG+ R
Sbjct: 254 DLYESLIITQAVVFCNTREKVDWLAKRMQDSNFTVCKMHGEMSQKERNDIMQRFRRGESR 313

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           +L++TD+  RG+D   V LV+N ++P+    Y+HR+GR+GRYG +G+ I  V
Sbjct: 314 VLISTDIWGRGLDVQQVSLVVNYDLPNSRENYIHRIGRSGRYGRKGVAINFV 365


>gi|358332904|dbj|GAA43229.2| ATP-dependent RNA helicase UAP56/SUB2 [Clonorchis sinensis]
          Length = 426

 Score =  198 bits (503), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 124/380 (32%), Positives = 199/380 (52%), Gaps = 18/380 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D +++  + + + + GF   S +Q    P  +   D + Q+KSG GK+ VFV+A L +L 
Sbjct: 47  DFILKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLD 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQ 139
                    ++L  TRE+A QI+        ++  + V  F GG  + +      K PV 
Sbjct: 107 PEEEANTSVLVLCHTRELAFQISKEYERFSKYMPKIKVGVFFGGLPIRKDIETLSKSPVH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +I+ + L +  V+ FI+DE DK+++      DI  I+   P  KQ+++ 
Sbjct: 167 IVVGTPGRILDLIRNQALKLQHVKHFIIDECDKMLDMLDMRRDIQEIFRMTPHQKQVMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPE-DATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     + +M DPL I  E D+   L G++Q    + E         ++ +KL 
Sbjct: 227 SATMSKEIRPVCRNFMQDPLEIFIENDSKLTLHGLRQHYVKVKEN--------EKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +LL +  FNQ +IF     R   + + L + NF A  +     Q+ RL    +FK  + R
Sbjct: 279 ELLDELQFNQVIIFVKSVQRCIALAQLLVDQNFPAIAMHRQMTQEERLERYQAFKNFQKR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +LV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT +S E   K 
Sbjct: 339 LLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDEVDAK- 397

Query: 378 HSLMGEINLDHAFNVGLVPD 397
             ++ ++      N+  +PD
Sbjct: 398 --VLNDVQNRFEVNISELPD 415


>gi|195614632|gb|ACG29146.1| ATP-dependent RNA helicase dhh1 [Zea mays]
          Length = 517

 Score =  198 bits (503), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 194/370 (52%), Gaps = 22/370 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 133 RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 191

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G H+K + V    GGT
Sbjct: 192 GKTAAFCIPALEK-IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGT 249

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R  +PV ++VG+PGRI  + K     +    + IMDEADKL++  F   I  +
Sbjct: 250 SLKDDIVRLYQPVHLIVGTPGRILDLTKKGVCILKDCSMLIMDEADKLLSPEFQPSIEQL 309

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+  P +I   D    L G+ Q  A        
Sbjct: 310 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELT-LKGITQFYA-------- 360

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 361 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 417

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P ++ TYLHR+GR+GR+G  
Sbjct: 418 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHL 477

Query: 363 GLVITIVSAE 372
           GL + +++ E
Sbjct: 478 GLAVNLITYE 487


>gi|169795350|ref|YP_001713143.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AYE]
 gi|184158781|ref|YP_001847120.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ACICU]
 gi|215482884|ref|YP_002325087.1| ATP-dependent RNA helicase [Acinetobacter baumannii AB307-0294]
 gi|239502877|ref|ZP_04662187.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB900]
 gi|260554464|ref|ZP_05826685.1| superfamily II DNA and RNA helicase [Acinetobacter baumannii ATCC
           19606 = CIP 70.34]
 gi|332850462|ref|ZP_08432782.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6013150]
 gi|332871914|ref|ZP_08440326.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6013113]
 gi|332875150|ref|ZP_08442983.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6014059]
 gi|384143899|ref|YP_005526609.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii
           MDR-ZJ06]
 gi|387123287|ref|YP_006289169.1| DNA/RNA helicase [Acinetobacter baumannii MDR-TJ]
 gi|403673418|ref|ZP_10935715.1| ATP-dependent RNA helicase RhlB [Acinetobacter sp. NCTC 10304]
 gi|407933404|ref|YP_006849047.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii TYTH-1]
 gi|417546745|ref|ZP_12197831.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC032]
 gi|417549949|ref|ZP_12201029.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-18]
 gi|417551996|ref|ZP_12203066.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-81]
 gi|417560504|ref|ZP_12211383.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC137]
 gi|417567342|ref|ZP_12218214.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC143]
 gi|417569100|ref|ZP_12219958.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC189]
 gi|417578007|ref|ZP_12228844.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-17]
 gi|417869092|ref|ZP_12514087.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH1]
 gi|417874056|ref|ZP_12518915.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH2]
 gi|417882420|ref|ZP_12526717.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH4]
 gi|421198208|ref|ZP_15655375.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC109]
 gi|421203948|ref|ZP_15661079.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AC12]
 gi|421457373|ref|ZP_15906710.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-123]
 gi|421534632|ref|ZP_15980904.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AC30]
 gi|421620338|ref|ZP_16061275.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC074]
 gi|421626256|ref|ZP_16067085.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC098]
 gi|421628334|ref|ZP_16069117.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC180]
 gi|421633485|ref|ZP_16074114.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-13]
 gi|421651643|ref|ZP_16092010.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC0162]
 gi|421653977|ref|ZP_16094308.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-72]
 gi|421660250|ref|ZP_16100450.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-83]
 gi|421664382|ref|ZP_16104522.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC110]
 gi|421668451|ref|ZP_16108490.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC087]
 gi|421671560|ref|ZP_16111530.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC099]
 gi|421674539|ref|ZP_16114468.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC065]
 gi|421676931|ref|ZP_16116826.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC111]
 gi|421686321|ref|ZP_16126076.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-143]
 gi|421691671|ref|ZP_16131330.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-116]
 gi|421697429|ref|ZP_16136992.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-692]
 gi|421703947|ref|ZP_16143397.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ZWS1122]
 gi|421707901|ref|ZP_16147282.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ZWS1219]
 gi|421786842|ref|ZP_16223225.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-82]
 gi|421794385|ref|ZP_16230486.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-2]
 gi|421795484|ref|ZP_16231567.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-21]
 gi|421804221|ref|ZP_16240131.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-694]
 gi|421806908|ref|ZP_16242770.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC035]
 gi|424051714|ref|ZP_17789246.1| hypothetical protein W9G_00403 [Acinetobacter baumannii Ab11111]
 gi|424059338|ref|ZP_17796829.1| hypothetical protein W9K_00452 [Acinetobacter baumannii Ab33333]
 gi|424063264|ref|ZP_17800749.1| hypothetical protein W9M_00547 [Acinetobacter baumannii Ab44444]
 gi|425750087|ref|ZP_18868054.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-348]
 gi|425753378|ref|ZP_18871262.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-113]
 gi|445400708|ref|ZP_21430179.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-57]
 gi|445460077|ref|ZP_21447986.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC047]
 gi|445473935|ref|ZP_21453047.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC338]
 gi|445477438|ref|ZP_21454354.1| type III restriction enzyme, res subunit / helicase C-terminal
           domain multi-domain protein [Acinetobacter baumannii
           Naval-78]
 gi|445492428|ref|ZP_21460375.1| DEAD/DEAH box helicase [Acinetobacter baumannii AA-014]
 gi|169148277|emb|CAM86142.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii AYE]
 gi|183210375|gb|ACC57773.1| Superfamily II DNA and RNA helicase [Acinetobacter baumannii ACICU]
 gi|193077811|gb|ABO12683.2| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii ATCC
           17978]
 gi|213986779|gb|ACJ57078.1| ATP-dependent RNA helicase rhlB [Acinetobacter baumannii
           AB307-0294]
 gi|260411006|gb|EEX04303.1| superfamily II DNA and RNA helicase [Acinetobacter baumannii ATCC
           19606 = CIP 70.34]
 gi|332730733|gb|EGJ62044.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6013150]
 gi|332731128|gb|EGJ62429.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6013113]
 gi|332736594|gb|EGJ67588.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii 6014059]
 gi|342229810|gb|EGT94660.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH2]
 gi|342231499|gb|EGT96308.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH1]
 gi|342237781|gb|EGU02234.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH4]
 gi|347594392|gb|AEP07113.1| ATP-dependent RNA helicase (DEAD box) [Acinetobacter baumannii
           MDR-ZJ06]
 gi|385877779|gb|AFI94874.1| DNA/RNA helicase, superfamily II [Acinetobacter baumannii MDR-TJ]
 gi|395523086|gb|EJG11175.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC137]
 gi|395553014|gb|EJG19022.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC143]
 gi|395553323|gb|EJG19329.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC189]
 gi|395566176|gb|EJG27821.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC109]
 gi|395568704|gb|EJG29374.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-17]
 gi|398326489|gb|EJN42636.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AC12]
 gi|400207097|gb|EJO38068.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-123]
 gi|400384633|gb|EJP43311.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC032]
 gi|400387917|gb|EJP50990.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-18]
 gi|400392255|gb|EJP59301.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-81]
 gi|404558190|gb|EKA63474.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-692]
 gi|404562280|gb|EKA67504.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-116]
 gi|404568923|gb|EKA74018.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-143]
 gi|404665270|gb|EKB33233.1| hypothetical protein W9G_00403 [Acinetobacter baumannii Ab11111]
 gi|404670076|gb|EKB37968.1| hypothetical protein W9K_00452 [Acinetobacter baumannii Ab33333]
 gi|404674832|gb|EKB42568.1| hypothetical protein W9M_00547 [Acinetobacter baumannii Ab44444]
 gi|407190994|gb|EKE62205.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ZWS1219]
 gi|407191116|gb|EKE62326.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ZWS1122]
 gi|407901985|gb|AFU38816.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii TYTH-1]
 gi|408507576|gb|EKK09270.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC0162]
 gi|408511827|gb|EKK13474.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-72]
 gi|408695527|gb|EKL41082.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC098]
 gi|408700633|gb|EKL46081.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC074]
 gi|408705274|gb|EKL50616.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-83]
 gi|408706015|gb|EKL51339.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-13]
 gi|408707441|gb|EKL52725.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC180]
 gi|408712679|gb|EKL57862.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC110]
 gi|409987522|gb|EKO43703.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AC30]
 gi|410380343|gb|EKP32931.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC087]
 gi|410381522|gb|EKP34087.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC099]
 gi|410383839|gb|EKP36358.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC065]
 gi|410393888|gb|EKP46239.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC111]
 gi|410394532|gb|EKP46860.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-2]
 gi|410401981|gb|EKP54116.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-21]
 gi|410410452|gb|EKP62356.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-82]
 gi|410411592|gb|EKP63461.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-A-694]
 gi|410417451|gb|EKP69221.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC035]
 gi|425487489|gb|EKU53847.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-348]
 gi|425497990|gb|EKU64079.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-113]
 gi|444763667|gb|ELW88003.1| DEAD/DEAH box helicase [Acinetobacter baumannii AA-014]
 gi|444768647|gb|ELW92858.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC338]
 gi|444773312|gb|ELW97408.1| DEAD/DEAH box helicase [Acinetobacter baumannii OIFC047]
 gi|444776516|gb|ELX00558.1| type III restriction enzyme, res subunit / helicase C-terminal
           domain multi-domain protein [Acinetobacter baumannii
           Naval-78]
 gi|444783282|gb|ELX07143.1| DEAD/DEAH box helicase [Acinetobacter baumannii Naval-57]
 gi|452950728|gb|EME56182.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii MSP4-16]
          Length = 383

 Score =  198 bits (503), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 111/354 (31%), Positives = 200/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PVQ+ 
Sbjct: 14  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPVQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    +S+     NLH+   +GG   ++ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAKSL-TKFSNLHLVTLLGGVDFDKQKKQLDANFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 133 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ + L  
Sbjct: 193 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAK--------QDKYRLLQD 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  L+ FK+GK  I
Sbjct: 245 ILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|319957241|ref|YP_004168504.1| dead/deah box helicase domain-containing protein [Nitratifractor
           salsuginis DSM 16511]
 gi|319419645|gb|ADV46755.1| DEAD/DEAH box helicase domain protein [Nitratifractor salsuginis
           DSM 16511]
          Length = 421

 Score =  198 bits (503), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 116/368 (31%), Positives = 201/368 (54%), Gaps = 27/368 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           ++  I + +   G+   +PIQ  A P VL G+D +  +++GTGK+  F +  L +LI+ P
Sbjct: 13  LDPAILKAVSAEGYTTPTPIQAQAIPAVLEGHDVLAAAQTGTGKTAGFTLPLLERLIQNP 72

Query: 88  VQ----QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
            Q    Q + ++L PTRE+A Q+ + VR+ G ++K +      GG  +E  KR +    +
Sbjct: 73  RQMKARQVRALVLTPTRELAAQVAESVRTYGKNLK-IRSTVVYGGVGIEPQKRAIARGCE 131

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IV+ +PGR+  +   + +++ ++   I+DEAD++++ GF+ DI  I +Q P  +Q L+ S
Sbjct: 132 IVIATPGRLLDLANQRAIDLSALETLILDEADRMLDMGFIHDIKKIIAQTPKERQTLLFS 191

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT+S +        + DP+LI           V Q V            +VD  +K   L
Sbjct: 192 ATFSPEIKRLAAGMLKDPVLIEVARQNTTAEQVSQKV-----------HHVDRHRKQELL 240

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
           ++++ +  + Q ++F+  +     + + L  A   +E + G + Q AR+ +L SFK  +V
Sbjct: 241 IRMIKEKGWKQVLVFTRTKHGANKLSKQLDQAGIPSEAIHGNKTQNARMKALKSFKENRV 300

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+LV TD+AARGID A +  V+N E+P+ A  Y+HR+GR GR G+ G  +++V  +    
Sbjct: 301 RVLVATDIAARGIDIAALPHVVNFELPNVAEDYVHRIGRTGRAGSEGEALSLVCVDE--- 357

Query: 377 FHSLMGEI 384
            H L+  I
Sbjct: 358 -HQLLRNI 364


>gi|160880140|ref|YP_001559108.1| DEAD/DEAH box helicase [Clostridium phytofermentans ISDg]
 gi|160428806|gb|ABX42369.1| DEAD/DEAH box helicase domain protein [Clostridium phytofermentans
           ISDg]
          Length = 514

 Score =  198 bits (503), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 124/442 (28%), Positives = 219/442 (49%), Gaps = 25/442 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ + KP+ Q ++E GF++ SPIQ    P VL G D +  +++GTGK+  F +  L  L
Sbjct: 4   NEMNLIKPLLQAIKEEGFIEPSPIQKKTIPLVLEGRDILGCAQTGTGKTAAFALPILQSL 63

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
            K      + +I+ PTRE+A+QI +     G +  +L      GG     QV   K  + 
Sbjct: 64  SKGEGSGVRALIITPTRELAIQIYESFECFGKYT-SLKQSVIYGGVGQSLQVNSLKAGID 122

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           I++ +PGR+  +I   Y+ +D++ +F++DEAD++++ GF+ DI  +   LP  +Q L+ S
Sbjct: 123 ILIATPGRLNDLIGQGYITLDAIEMFVLDEADQMLDMGFLNDIKKVIKLLPKTRQTLLFS 182

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT   +  +     + +P +I+    T  +  ++Q V  +      SL        L  L
Sbjct: 183 ATMPKEIESLATNLLNNPEIIKISPVTSTVDSIEQSVYFVDRLNKISL--------LTSL 234

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           + +   ++ ++F+  +   + + + L  A    + + G + Q AR  +L  FK GK+++L
Sbjct: 235 IKEHKMSRVLVFTKTKHGADRVADKLNKAKVKTQAIHGGKGQNARQTALSDFKEGKIKVL 294

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARGID + +  V+N +IP+ A  Y+HR+GR GR G  G  I + + + +     
Sbjct: 295 VATDIAARGIDISELSYVVNYDIPNQAEIYIHRIGRTGRAGLGGNAINLCNIDDMDYLRE 354

Query: 380 LMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVEQTAEESSKVEN 439
           +   I +       ++P+  +     W   +     KP+   +     +   +ES K E 
Sbjct: 355 IEKHIGM-------VIPEVPS----KWPMLILEKTEKPVRGQRPENTTKNVGKESVKTEE 403

Query: 440 TKPL-RGAPSKEVTKKGASKEG 460
              L  GA   +  KK   K G
Sbjct: 404 KILLNEGAKKTKAHKKPVYKTG 425


>gi|160881936|ref|YP_001560904.1| DEAD/DEAH box helicase [Clostridium phytofermentans ISDg]
 gi|160430602|gb|ABX44165.1| DEAD/DEAH box helicase domain protein [Clostridium phytofermentans
           ISDg]
          Length = 527

 Score =  198 bits (503), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 117/361 (32%), Positives = 192/361 (53%), Gaps = 13/361 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +++ ++ PI + ++E G+ + +PIQ  A P VL G D + Q+++GTGK+  F +  L K 
Sbjct: 6   DEMELQTPIIRAIEELGYEEMTPIQAQAIPVVLEGKDIVGQAQTGTGKTAAFSIPILQK- 64

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQ 139
           I   V+  Q +IL PTRE+A+Q++D +      +  +      GG  + R  R     VQ
Sbjct: 65  IDPKVKGLQAVILCPTRELAIQVSDEMHKFSKFMHGIKAIPIYGGQDITRQIRSLKAGVQ 124

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IV+G+PGR+   ++ K +  D V +  +DEAD+++N GF EDI  I  ++P  +Q L+ S
Sbjct: 125 IVIGTPGRVMDHMRRKTVKFDKVSMIALDEADEMLNMGFREDIETILKEMPEDRQTLLFS 184

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     +   + Y  D  +++        +  K+L     E     +R  ++   L +L
Sbjct: 185 ATMPQPIMDIARTYQKDATIVK--------VVKKELTVPKIEQYYYEVRPKNKVDVLSRL 236

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L      +C++F N + + + +   L+   F AE L G   Q+ R   + SF+ GK  IL
Sbjct: 237 LDMYSPKRCLVFCNTKRQVDELVTALSGRGFFAEGLHGDLKQQQRDRVMSSFRTGKAEIL 296

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARGID  +V+ V N ++P D   Y+HR+GR GR G  G   T+V  + + K   
Sbjct: 297 VATDVAARGIDVDDVEAVFNYDVPQDEEYYVHRIGRTGRAGRTGRAFTLVVGKEVYKLRD 356

Query: 380 L 380
           +
Sbjct: 357 I 357


>gi|348672361|gb|EGZ12181.1| hypothetical protein PHYSODRAFT_352190 [Phytophthora sojae]
          Length = 407

 Score =  198 bits (503), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 121/354 (34%), Positives = 191/354 (53%), Gaps = 19/354 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF K S IQ  A    + G D I QS+SGTGK+ VF ++ L  L    
Sbjct: 41  LKEDLLRGIYSYGFEKPSAIQQRAIKPAIQGRDLIAQSQSGTGKTAVFSISVLQSL-DTS 99

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQIVVG 143
             + Q ++++PTRE+A Q   VV ++G  + N+     IGG  V    R     VQ+V G
Sbjct: 100 SNETQALVISPTRELAEQTQKVVLALGDFM-NVQCHACIGGKSVGEDIRRLDFGVQVVSG 158

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGRI  MI+ + L   ++++ ++DEAD+++N GF E I  IY  LPP  Q+L+VSAT  
Sbjct: 159 TPGRIFDMIRRRNLRTRNIKMLVIDEADEMLNKGFKEQIYDIYRYLPPSTQVLLVSATMP 218

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLL 260
            + L   +K+M +P+ +  +     L G+KQ    + +          EE K   L  L 
Sbjct: 219 QEVLDLTRKFMNEPVKVLVKRDELTLEGIKQFFVAVEK----------EEWKFDTLCDLY 268

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + + +   +  ANF    + G   QK R A +  F+ G  R+L+
Sbjct: 269 DTLTITQAVIFCNTKRKVDWLTAKMREANFTVSAMHGDMPQKERDAIMQEFRSGGSRVLI 328

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           TTD+  RG+D   V LVI  ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 329 TTDVWGRGLDVQQVSLVICYDLPNNRELYIHRIGRSGRFGRKGVAINFVKDDDI 382


>gi|113971464|ref|YP_735257.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
           MR-4]
 gi|113886148|gb|ABI40200.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-4]
          Length = 549

 Score =  197 bits (502), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 196/353 (55%), Gaps = 18/353 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK-- 85
           +  PI++ + E G+   SPIQ  A P VL G D +  +++GTGK+  F +  L  L K  
Sbjct: 8   LSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGN 67

Query: 86  -LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
              V Q + ++L PTRE+A Q+++ V + G ++  L      GG     Q+++ +  V +
Sbjct: 68  KAKVGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLRHGVDV 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +V +PGR+  + + K +  + + + ++DEAD++++ GF+ DI  I + LP  +Q L+ SA
Sbjct: 127 LVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRDIKKILAMLPAKRQNLMFSA 186

Query: 201 TYSHDNLATLQKYMVD-PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           T+S D +  L K +V+ P+ I           VKQ +  + + +  +L        L+QL
Sbjct: 187 TFS-DEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSAL--------LIQL 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           + Q  + Q ++FS  +     + ++L  A   A  + G + Q AR  +L  FK G+VR+L
Sbjct: 238 IKQENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           V TD+AARG+D   +  V+N ++P+    Y+HR+GR GR G  G  +++VS+E
Sbjct: 298 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVSLVSSE 350


>gi|340519976|gb|EGR50213.1| predicted protein [Trichoderma reesei QM6a]
          Length = 396

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 212/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DDMNLKSELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 85  IDPSVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVREDMKALQDGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  D++++F++DEAD++++ GF + I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVHDMIQRRFLKTDAMKMFVLDEADEMLSRGFTDQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    ++M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTRFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|146197776|dbj|BAF57607.1| DEAD box RNA helicase Me31B [Dugesia japonica]
          Length = 503

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 121/371 (32%), Positives = 201/371 (54%), Gaps = 21/371 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D  +++ I +G+ E G+   SPIQ A+ P  L G D + ++K+GTGK+  + +  L K 
Sbjct: 52  DDFCLKRDILKGIYEKGWEMPSPIQEASIPISLIGRDILARAKNGTGKTGAYSIPLLEK- 110

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE----RPKRPVQ 139
           I   + Q Q IIL PTRE+A+Q + +   +  H +   +    GGT ++    R ++ V 
Sbjct: 111 IDPSINQIQGIILVPTRELALQTSQICTELAKHTET-KIMVTTGGTSLKDDIVRLQQTVH 169

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           I++ +PGR+  +IK   ++ +  ++ ++DEADKL++  F E I +I S+LP  +Q+++ S
Sbjct: 170 IILATPGRVNDLIKRDIVSTNFCKILVIDEADKLLSADFEEVIDYIISKLPTQRQIMLYS 229

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT+       L+K+M DP  I   D    L G+ Q  A           YV E +K   L
Sbjct: 230 ATFPQSVQQFLEKHMRDPYEINLMDEL-TLKGISQYYA-----------YVQERQKVHCL 277

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L S+   NQ +IF N   R E++ + + +  +   Y+    +Q  R      F+ G  
Sbjct: 278 NTLFSRLQINQSIIFCNTAQRVELLAKKITDLGYSCYYIHAKMNQVYRNRVFHEFRNGNC 337

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R LV TDL  RGID  +V++VIN + P  A TYLHR+GR+GRYG  G+ + +++ +    
Sbjct: 338 RNLVCTDLFTRGIDIPSVNVVINFDFPKYAETYLHRIGRSGRYGHLGVAVNLITYDDRFA 397

Query: 377 FHSLMGEINLD 387
             ++  ++N +
Sbjct: 398 LKNIETQLNTE 408


>gi|346322833|gb|EGX92431.1| ATP dependent RNA helicase (Dhh1), putative [Cordyceps militaris
            CM01]
          Length = 1261

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/370 (35%), Positives = 195/370 (52%), Gaps = 22/370 (5%)

Query: 10   RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
            +T+DV     + FEN  L ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 797  QTEDVTKTKGLEFENFAL-KRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDVLARAKNGT 855

Query: 70   GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
            GK+  FV+  L + I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 856  GKTAAFVIPVLER-INPKVNKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGT 913

Query: 130  ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                 + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 914  GLRDDIIRLQEPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSAEFTPTIEQL 973

Query: 186  YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
                P  +Q+++ SAT+         + M  P  I   D    L G+ Q  A        
Sbjct: 974  LQFHPKDRQVMLFSATFPLSVKDFSDRNMSSPYEINLMDELT-LRGITQYYA-------- 1024

Query: 246  SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
               +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 1025 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQL 1081

Query: 303  ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 1082 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 1141

Query: 363  GLVITIVSAE 372
            GL I +++ E
Sbjct: 1142 GLAINLINWE 1151


>gi|168183325|ref|ZP_02617989.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Bf]
 gi|182673470|gb|EDT85431.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Bf]
          Length = 425

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 124/394 (31%), Positives = 210/394 (53%), Gaps = 25/394 (6%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--LPVQQPQTI---ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----Q 130
           L  L K     + P+ I   +LAPTRE+A+QI +     G ++ NL      GG     Q
Sbjct: 60  LQNLSKDKKANKNPRPIRALVLAPTRELAIQIAESFECYGKYI-NLKSAVIFGGVSQNPQ 118

Query: 131 VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
            +  +  V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S+LP
Sbjct: 119 TKVLREGVDILIATPGRMLDLFNQKYIDLRNIEFFVLDEADRMLDMGMIHDVKKIISKLP 178

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
            ++Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  +L   
Sbjct: 179 KIRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRAL--- 235

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +L++
Sbjct: 236 -----LKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNN 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           FK GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+   
Sbjct: 291 FKEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCD 350

Query: 371 AESLVKFHSLMGEINL------DHAFNVGLVPDN 398
            E      ++   IN       DH + +  + +N
Sbjct: 351 IEETKSLKAIEKLINKEIPVVEDHPYKIRHINEN 384


>gi|118602908|ref|YP_904123.1| DEAD/DEAH box helicase domain-containing protein [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
 gi|118567847|gb|ABL02652.1| ATP-dependent RNA helicase CsdA [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
          Length = 606

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 124/412 (30%), Positives = 221/412 (53%), Gaps = 24/412 (5%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPT 99
           G+   SPIQ     ++LNG D I Q+++GTGK+  F +  L+K I L +  PQ +IL PT
Sbjct: 31  GYETPSPIQEQCITHLLNGEDIIGQAQTGTGKTAAFSLPLLDK-IDLGINMPQLLILTPT 89

Query: 100 REIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE---RP-KRPVQIVVGSPGRIKQMIKLK 155
           RE+A+Q+++ V++    +K  HV    GG   +   RP KR V  +VG+PGR+   IK  
Sbjct: 90  RELAIQVSEAVQTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVHAIVGTPGRVMDHIKKG 149

Query: 156 YLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMV 215
            L +D ++ F++DEAD+++  GF++DI WI  ++P  +Q+ + SAT         ++++ 
Sbjct: 150 TLKLDHLKSFVLDEADEMLKMGFIDDIKWIMQRIPEQRQIALFSATMPSVIKKVAEQFLN 209

Query: 216 DPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQ 275
            P +++ +  T     + Q   ++            + + L ++L  T F+  +IF   +
Sbjct: 210 QPKIVKIKTKTETATTITQKYCMVGGLSQ-------KLEALTRILEVTTFDAMIIFVRTK 262

Query: 276 LRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVD 335
                + E L+   F AE ++G   Q  R   + ++K+GK+ IL+ TD+AARG+D   + 
Sbjct: 263 TLTTELAEKLSARGFSAEAINGDIQQNQRERIITNYKKGKIDILIATDVAARGLDVERIS 322

Query: 336 LVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINLDHAFNVGLV 395
            V+N +IP DA +Y+HR+GR GR G +G  I  VS       ++      ++H     + 
Sbjct: 323 HVVNYDIPQDAESYVHRIGRTGRAGRKGDAILFVSNRERRMLNT------IEHITRQKIT 376

Query: 396 PDNLTGDQINWTQRVQTL---LAKPLDQAQE---REDVEQTAEESSKVENTK 441
           P  L   +I   +R++T    +A+ ++  +    ++ V +  +E+ ++E +K
Sbjct: 377 PIELPSAKIINAKRIETFKQNIAQTINNQKLDIFKKLVSEFQQENPEIETSK 428


>gi|403738909|ref|ZP_10951510.1| putative DEAD-box RNA helicase [Austwickia chelonae NBRC 105200]
 gi|403191559|dbj|GAB78280.1| putative DEAD-box RNA helicase [Austwickia chelonae NBRC 105200]
          Length = 513

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 119/359 (33%), Positives = 191/359 (53%), Gaps = 27/359 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI--- 84
           I   I   L E+G V   PIQ    P  L G+D I Q+K+GTGK++ F V  LNK++   
Sbjct: 39  IHPEIADALAEHGIVAPFPIQAMTLPVALGGHDIIGQAKTGTGKTLGFGVPLLNKVVAPQ 98

Query: 85  -------KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVER 133
                    P  +PQ +++ PTRE+AVQ+   +   G   + + V+   GG     Q+  
Sbjct: 99  DPGYADLDYP-NRPQALVVVPTRELAVQVAADLTRAGKR-RGIRVECIYGGRAFEPQITA 156

Query: 134 PKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMK 193
             R V++VVG+PGR+  + + ++LN+ S+R  ++DEAD++++ GF+ D+  I  + P  +
Sbjct: 157 LTRGVEVVVGTPGRLIDLNQQRHLNLHSIRTVVLDEADEMLDLGFLPDVERILGETPTSR 216

Query: 194 QMLVVSATYSHDNLATLQKYMVDPLLIRPE---DATRPLLGVKQLVALIPECKNPSLRYV 250
           Q ++ SAT     +A  ++YM  P  IR     D +  +  ++Q +             +
Sbjct: 217 QTMLFSATMPGAVVALARRYMTQPTHIRAMTTGDDSHTVQAIEQFIY--------RAHAM 268

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
           D+ + L ++L        ++F+  +     + + L +  F A  L G   Q AR  ++ +
Sbjct: 269 DKTEMLSRILQAKGRGLTIVFTRTKRTAAKVADELTDRGFAAASLHGDLGQGAREQAMRA 328

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           F++GKV +LV TD+AARGID  NV  V+N + P D  TYLHR GR GR G  G+ IT+V
Sbjct: 329 FRKGKVDVLVATDVAARGIDVENVTHVVNYQCPEDEKTYLHRTGRTGRAGQTGIAITLV 387


>gi|91794665|ref|YP_564316.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
           OS217]
 gi|91716667|gb|ABE56593.1| DEAD/DEAH box helicase-like protein [Shewanella denitrificans
           OS217]
          Length = 611

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 191/358 (53%), Gaps = 23/358 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           + + L E G+   +PIQ A+   ++ G D I Q+++GTGK+  F +  LNK + + +  P
Sbjct: 17  LLRALDELGYENPTPIQSASIDPLMAGKDIIGQAQTGTGKTGAFALPLLNK-VDMKINAP 75

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           Q ++LAPTRE+AVQ+ +   S   H+K  HV    GG     Q+   KR  Q++VG+PGR
Sbjct: 76  QILVLAPTRELAVQVAEAFGSYAKHMKGFHVLPIYGGQSMHQQLSALKRGPQVIVGTPGR 135

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +   ++   L +DS++  ++DEAD+++  GF++DI W+    P   Q+ + SAT      
Sbjct: 136 VMDHMRRGTLKLDSLKALVLDEADEMLKMGFIDDIEWVLEHKPKDSQLALFSATMPEQIK 195

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV-----DEEKKLVQLLSQ 262
               K++ +P+ I    +T  +  + Q             R+V     ++ + LV++L  
Sbjct: 196 RVAAKHLTNPVNISIAASTTTVESIDQ-------------RFVQVSQHNKLEALVRVLEV 242

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
                 +IF   +     + E L    + +  L G  +Q+AR  ++D  KRGK+ IL+ T
Sbjct: 243 ENTEGVIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDILIAT 302

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           D+AARG+D   +  V+N +IP+D   Y+HR+GR GR G  G+ I  V++  +    ++
Sbjct: 303 DVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTI 360


>gi|295106692|emb|CBL04235.1| Superfamily II DNA and RNA helicases [Gordonibacter pamelaeae
           7-10-1-b]
          Length = 530

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 228/480 (47%), Gaps = 49/480 (10%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL- 83
           D+ + K     +++ G+   +P+Q  A P VL G D I  + +GTGK+  F++  L+ L 
Sbjct: 6   DLGLSKDALAAVEKLGYENPTPVQEQAIPLVLEGRDLIAAASTGTGKTAAFLLPILSTLP 65

Query: 84  -IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQ 139
            +K   + P+ ++++PTRE+A QI      +    ++     F G   G Q++  +    
Sbjct: 66  RVKGRNRAPRVLVVSPTRELAQQIARTCMQISRQTRHFTTTVFGGTPYGPQIKELRGGTD 125

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +++ +PGR+K ++K   +N+ SV + ++DEAD++++ GF+ D+T I    P  +Q L+ S
Sbjct: 126 VLIATPGRLKDLMKRGVVNLSSVEVLVLDEADRMLDMGFLPDVTTIVDATPECRQTLLFS 185

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        L   + DP ++           V+Q +  I     P L        L  +
Sbjct: 186 ATIDQSIQKNLGSLLNDPAMVEIARNGETAKTVEQFMMPIKNFNKPEL--------LEAV 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L +    + ++F+  + R E   E L +A F AE +   + Q AR  +L++F+RGK  IL
Sbjct: 238 LREKGSERIIVFARTKNRTEDCAEALCDAGFRAESIHSDKSQGARRRALENFRRGKTSIL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+ ARGID  +VD VIN ++P     Y+HR+GR GR G +G  I+ V+ E+      
Sbjct: 298 VATDVLARGIDVPDVDHVINFDLPDMPEDYVHRIGRTGRAGEKGYAISFVTRETSRTLRD 357

Query: 380 LMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVEQTAEESSKVEN 439
           +                + L G  I + + ++T    P    Q++    Q     SK   
Sbjct: 358 I----------------ERLIGKDIPFME-LETYELDPTLLKQKKGGARQGG---SKSGG 397

Query: 440 TKPLRGAPSKEVTKKGASKEGTKWNLTDGQSEEESDSENDGKP------DENGSQRGSKR 493
           +KP     + +   K A K G +          +SD   DGKP       E G  +GSKR
Sbjct: 398 SKPYGKRSAGKSYGKPAGKGGYR----------KSDDRKDGKPAGKSYAAEGGESKGSKR 447


>gi|237793963|ref|YP_002861515.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Ba4 str.
           657]
 gi|229261675|gb|ACQ52708.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum Ba4 str.
           657]
          Length = 425

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 124/393 (31%), Positives = 210/393 (53%), Gaps = 23/393 (5%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           +LFEN  +I KPI++ L+E G+ K +PIQ  + PY+L+G D +  +++GTGK+  F V  
Sbjct: 1   MLFENLEII-KPIQKALKEEGYKKTTPIQEKSIPYILDGKDLVGCAQTGTGKTAAFAVPV 59

Query: 80  LNKLIK--LPVQQPQTI---ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP 134
           L  L K     + P+ I   +LAPTRE+A+QI +     G ++    V  F G +Q  + 
Sbjct: 60  LQNLSKDKKANKNPRPIRALVLAPTRELAIQIAESFECYGKYINLKSVVIFGGVSQNPQT 119

Query: 135 K---RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           K     V I++ +PGR+  +   KY+++ ++  F++DEAD++++ G + D+  I S+LP 
Sbjct: 120 KVLREGVDILIATPGRMLDLFNQKYIDLRNIEFFVLDEADRMLDMGMIHDVKKIISKLPK 179

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
           ++Q L+ SAT   +    +   + DP+ +     +  +  + Q V  + + +  +L    
Sbjct: 180 IRQNLLFSATMPSEITKLVDSIVKDPIRVEVTPVSSTVDTITQEVYHVRKKQKRAL---- 235

Query: 252 EEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L  LL        ++FS  +    +I ++L  A   AE + G + Q AR  +L++F
Sbjct: 236 ----LKHLLKDKSIESALVFSTTKRGANMIAKDLVEAGIEAEAIHGNKSQNARQRALNNF 291

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           K GK+R+LV TD+AARGID   +  V N  +P    TY+HR+GR GR G +G+ I+    
Sbjct: 292 KEGKIRVLVATDIAARGIDVNELSHVFNYNLPDVPETYVHRIGRTGRAGAKGVAISFCDI 351

Query: 372 ESLVKFHSLMGEINL------DHAFNVGLVPDN 398
           E      ++   IN       DH + +  + +N
Sbjct: 352 EETKSLKAIEKLINKEIPVVEDHPYKIRHINEN 384


>gi|398313027|emb|CCI88203.1| ATP-dependent RNA helicase, partial [Saccharomyces uvarum]
          Length = 392

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 127/370 (34%), Positives = 201/370 (54%), Gaps = 25/370 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L 
Sbjct: 18  FESMDLKEDLLR-GIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL- 75

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKR 136
           + I L  +  Q +IL+PTRE+A QI  VV ++G ++ N++     GG  ++       K 
Sbjct: 76  QAIDLKKKDLQALILSPTRELANQIGQVVTNLGDYM-NVNAFAMTGGKTLKDDLKKLQKN 134

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQ 194
             Q+V G+PGR+  MIK + L   +V++ I+DEAD+L++   GF + I  I+++LP   Q
Sbjct: 135 GCQVVSGTPGRVLDMIKRQMLQTRNVQVLILDEADELLSETLGFKQQIYDIFAKLPKNCQ 194

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
           ++VVSAT + D L   +K+M DP+ I  +     L G+KQ V             VD+E 
Sbjct: 195 VVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKED 243

Query: 255 ----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  +       QCVIF N + + + + + L  +NF    + G   Q+ R   ++ 
Sbjct: 244 WKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMND 303

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           F+ G  R+L++TD+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++
Sbjct: 304 FRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFIT 363

Query: 371 AESLVKFHSL 380
                K   +
Sbjct: 364 KTDSAKLREI 373


>gi|329897169|ref|ZP_08271909.1| ATP-dependent RNA helicase RhlB [gamma proteobacterium IMCC3088]
 gi|328921324|gb|EGG28718.1| ATP-dependent RNA helicase RhlB [gamma proteobacterium IMCC3088]
          Length = 397

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 121/384 (31%), Positives = 203/384 (52%), Gaps = 25/384 (6%)

Query: 16  SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           +N D      + +++ + +G+++ GFV  SPIQ A  P+ L G DAI ++++GTGK+  F
Sbjct: 10  ANADTRTFESLDLDERLLKGIKDLGFVTCSPIQGAILPHTLRGLDAIGKAQTGTGKTAAF 69

Query: 76  VVAALNKLIKLPVQ------QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           ++   N L+  P+       +P+ +++APTRE+ +QI +  + +G +   L V   IGG 
Sbjct: 70  LITVFNDLLAHPIDDERFVGEPRALVIAPTRELVMQIAEDAKDLGKYT-GLRVVTLIGGM 128

Query: 130 QVERP-----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITW 184
             ++      + PV +VV +PGR+   +  + L +D V   ++DEAD++++ GF+  +  
Sbjct: 129 DYQKQLQKLDQEPVDLVVATPGRLIDFMTRQDLFLDRVETIVLDEADRMLDMGFIPQVKR 188

Query: 185 IYSQLPPM--KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPEC 242
           I    PP   +Q L+ SAT++ D +   +++   P+ I  E  +     V Q V L+   
Sbjct: 189 IVRATPPKEHRQTLLFSATFTQDIINLSEQWTYKPIKIEIEPESVATANVDQKVYLV--- 245

Query: 243 KNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
            +   RY    K L+ LL        ++F+N + +   + E L  A+     LSG   Q 
Sbjct: 246 -SAEQRY----KILLNLLRDEAATSVIVFANRRDQVRHLYERLRKASIPCGVLSGEIPQN 300

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R  +L+ FKRGK+++LV TD+A RGI    V  V+N  +P D   Y+HR+GR GR G  
Sbjct: 301 KRTRTLEDFKRGKLKVLVATDVAGRGIHVDGVSHVVNYNLPEDPDDYVHRIGRTGRAGAT 360

Query: 363 GLVITIVSAES---LVKFHSLMGE 383
           G  I+  S +    L    +L+GE
Sbjct: 361 GTSISFASEDDAFLLPDIEALLGE 384


>gi|323453004|gb|EGB08876.1| Apo-Eif4aiii [Aureococcus anophagefferens]
          Length = 395

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 120/360 (33%), Positives = 193/360 (53%), Gaps = 20/360 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE   L E  +R G+   GF + S IQ  A   ++ G D I QS+SGTGK+ VF +A L 
Sbjct: 24  FEGMALREDLLR-GIYAYGFERPSAIQQRAITPIVAGRDVIAQSQSGTGKTAVFCIAML- 81

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV----ERPKRP 137
           ++++    + Q + ++PTRE+A Q   V  ++G ++ N+     IGG  +     R    
Sbjct: 82  QVLESATNETQMLTISPTRELAEQTQKVCLALGDYM-NVQCHACIGGKSIGEDIRRLDYG 140

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           VQIV G+PGR+  MIK + L   ++++ ++DEAD+++N GF E I  IY  LPP  Q+++
Sbjct: 141 VQIVSGTPGRVFDMIKRRNLRTRNLKMLVIDEADEMLNRGFKEQIYDIYRYLPPSTQVVL 200

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK-- 255
           +SAT   + L   +K+M +P+ +  +     L G+KQ    +            EE K  
Sbjct: 201 ISATMPQEVLDMTRKFMNEPVRVLVKRDELTLEGIKQFFVAVER----------EEWKFD 250

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + +   +  ANF    + G   Q+ R A +  F+ G
Sbjct: 251 TLCDLYDTLTITQAVIFCNTKRKVDWLANKMREANFTVSAMHGDMPQRERDAIMAEFRGG 310

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
             R+L+ TD+  RG+D   V LVI  ++P++   Y+HR+GR+GR+G +G+ I  V  + +
Sbjct: 311 ASRVLIATDIWGRGLDVQQVSLVICYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDV 370


>gi|63139086|gb|AAY33860.1| eukaryotic initiation factor 4A [Cenchrus americanus]
          Length = 414

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 203/382 (53%), Gaps = 27/382 (7%)

Query: 3   HDIQKCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
            ++     T++  ++ D +FE  +D+ +++ + +G+   GF K S IQ         G D
Sbjct: 21  QELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 80

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 81  VIQQAQSGTGKTATFCSGILQQL-DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GV 138

Query: 121 HVDYFIGGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R     V +VVG+PGR+  M++ + L  D +++F++DEAD++++ 
Sbjct: 139 KVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSR 198

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 199 GFKDQIYDIFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF- 257

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ EK+      L  L       Q VIF N + + + + + + + + 
Sbjct: 258 ------------YVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 305

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 306 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 365

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 366 HRIGRSGRFGRKGVAINFVTRD 387


>gi|195999078|ref|XP_002109407.1| conserved hypothetical protein [Trichoplax adhaerens]
 gi|190587531|gb|EDV27573.1| conserved hypothetical protein [Trichoplax adhaerens]
          Length = 425

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 125/381 (32%), Positives = 204/381 (53%), Gaps = 21/381 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D I Q+KSG GK+ VFV+A L +L 
Sbjct: 47  DFLLKPELLRAIVDCGFEHPSAVQHECIPQAILGMDVICQAKSGMGKTAVFVLATLQQLD 106

Query: 85  KLPV-QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  +   ++L  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 107 --PVDNEVSVLVLCHTRELAFQISKEYDRFSKYMDNVKVAVFFGGINIKKDQATLKSSCP 164

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGR+  +++ K LN+ + + FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 165 HIVVGTPGRMLALVREKSLNLKNCKHFILDECDKMLEQLDMRRDVQEIFRMTPHQKQVMM 224

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ +  +D T+  L G++Q            L+  ++ +KL
Sbjct: 225 FSATLSKEIRPVCKKFMQDPMEVYVDDDTKLTLHGLRQHYV--------KLKDHEKNRKL 276

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ +IF     R   + + L   NF A  +     Q+ RL     FK    
Sbjct: 277 FDLLDILEFNQVIIFVKSVQRCVALTQLLVEQNFPAISIHRGMSQEDRLKHYGEFKNFNK 336

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL +T VS++   K
Sbjct: 337 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSSQEDAK 396

Query: 377 FHSLMGEINLDHAFNVGLVPD 397
              ++ E+      +VG +P+
Sbjct: 397 ---ILNEVQDRFEVSVGELPE 414


>gi|304390841|ref|ZP_07372793.1| ATP-dependent RNA helicase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315656383|ref|ZP_07909272.1| ATP-dependent RNA helicase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|304325724|gb|EFL92970.1| ATP-dependent RNA helicase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315492942|gb|EFU82544.1| ATP-dependent RNA helicase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 525

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 154/527 (29%), Positives = 260/527 (49%), Gaps = 53/527 (10%)

Query: 13  DVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKS 72
           D+ +N D  F  D  +E  I   L++ G +   PIQ    P  LN  D I Q+K+GTGK+
Sbjct: 19  DLEANQDKTFA-DFDVEPEIVAALRDQGIIHPFPIQALTLPVALNRQDIIGQAKTGTGKT 77

Query: 73  IVFVVAALNKLI--------KLPVQQ-PQTIILAPTREIAVQITDVVRSVGAHVKNLHVD 123
           + F +  L+ +I        ++P    PQ +++ PTRE+A Q+   +R+   H     ++
Sbjct: 78  LGFAIPILHDIIGPGDEGWDEIPDSGFPQALVILPTRELAKQVAAEIRAAATHRVARIIE 137

Query: 124 YFIG---GTQVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVE 180
            + G    +QVE  ++ V++VVG+PGR+  ++    L +  +R  +MDEAD++++ GF+ 
Sbjct: 138 IYGGVGFDSQVEALRKGVEVVVGTPGRLIDLMNQGTLKLGRIRTLVMDEADEMLDMGFLP 197

Query: 181 DITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR---PEDATRPLLGVKQLVA 237
           D+  + SQ+PP +  ++ SAT     +A  ++YM  P  IR   P D+++ +  VKQ+V 
Sbjct: 198 DVEKLISQIPPRRHTMLFSATMPGPVVALARRYMYQPTHIRATDPTDSSQTVRQVKQVVY 257

Query: 238 LIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSG 297
            +          +++ + + ++L        +IF+  +   + + + LA   F    + G
Sbjct: 258 RV--------HSLNKTEVIARILQARNRGLTIIFTRTKRTCQRLSDELAERGFATGAIHG 309

Query: 298 AQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAG 357
              Q AR  +L +F+ GKV +LV TD+AARGID  +V  VIN E P D  TY+HR+GR  
Sbjct: 310 DLGQNARERALRAFRHGKVDVLVATDVAARGIDVDDVTHVINYECPEDDKTYIHRIGRTA 369

Query: 358 RYGTRGLVITIVSAESLVKFHSLMGEINLD------------HAFNVGLVPDNLTGDQIN 405
           R G +G  IT +  E L ++  +   ++LD            H ++   +P + T +   
Sbjct: 370 RAGNKGSAITFIDWEDLTRWRVINRTLDLDFADPQETYHTSPHLYSDLDIPTDATANLPR 429

Query: 406 WTQRVQTLLAKPLDQAQEREDV---EQTAEESSKVENTKPLRG-APSKEVTKKGASKEGT 461
           + +    L A+ L+    R+     ++ A + S     K  +G  P K   KK   KE  
Sbjct: 430 FRRVRAGLEAEELEDLGGRDPARPGKRRAGKGSGAGRRKSEKGRGPRKNTKKKHDCKERE 489

Query: 462 KWNLTDGQSEEESDSENDGKPDENGSQRGSKRSKEFKTQEKCVKGAG 508
           K     G +EE +  E           R  KR++  K+ +K  KG G
Sbjct: 490 K-TTKRGAAEEPAKKE-----------RQRKRTRRHKS-DKTGKGKG 523


>gi|255716336|ref|XP_002554449.1| KLTH0F05610p [Lachancea thermotolerans]
 gi|238935832|emb|CAR24012.1| KLTH0F05610p [Lachancea thermotolerans CBS 6340]
          Length = 396

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 121/338 (35%), Positives = 189/338 (55%), Gaps = 19/338 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   GFV  S IQ  A   +  G+D + Q++SGTGK+  F +AAL K 
Sbjct: 25  DDLNLKEELLRGIYGYGFVDPSAIQQRAILPITEGHDVLAQAQSGTGKTGTFSIAALQK- 83

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRPVQ 139
           I   ++ PQ ++LAPTRE+A+QI  VV ++  H+ ++ V   IGGT      E  +   Q
Sbjct: 84  IDPKIKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSFVEDAEALRDGAQ 142

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+  MI+ +    D +++FI+DEAD+++++GF E I  I++ LPP  Q++++S
Sbjct: 143 IVVGTPGRVFDMIERRRFRTDHIKMFILDEADEMLSSGFKEQIYKIFTLLPPTTQVVLLS 202

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---L 256
           AT   D L    K+M +P+ I  +     L G+KQ    + E          E+ K   L
Sbjct: 203 ATMPQDVLEVTTKFMRNPIRILVKKDELTLEGIKQFFINVEE----------EDYKYDCL 252

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + E + + L   NF    +     Q+ R   +  F+ G  
Sbjct: 253 SDLYDSISVTQAVIFCNTRRKVEELTQRLVADNFTVSAIYSDLPQQQRDTIMKEFRTGSS 312

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
           RIL++TDL ARGID   V LVIN ++P +   Y+HR+G
Sbjct: 313 RILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIG 350


>gi|143456931|sp|Q6H7S2.2|RH8_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 8
 gi|49388093|dbj|BAD25226.1| putative RNA helicase [Oryza sativa Japonica Group]
 gi|215701408|dbj|BAG92832.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623328|gb|EEE57460.1| hypothetical protein OsJ_07688 [Oryza sativa Japonica Group]
          Length = 508

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 197/382 (51%), Gaps = 22/382 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 124 RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 182

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G H+K + V    GGT
Sbjct: 183 GKTAAFCIPALEK-IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGT 240

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R  +PV ++VG+PGRI  + K     +    + IMDEADKL++  F   +  +
Sbjct: 241 SLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQL 300

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+  P +I   D    L G+ Q  A        
Sbjct: 301 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELT-LKGITQFYA-------- 351

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 352 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 408

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 409 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHL 468

Query: 363 GLVITIVSAESLVKFHSLMGEI 384
           GL + +++ E     + +  E+
Sbjct: 469 GLAVNLITYEDRFNLYRIEQEL 490


>gi|242007840|ref|XP_002424727.1| eukaryotic initiation factor 4A-II, putative [Pediculus humanus
           corporis]
 gi|212508220|gb|EEB11989.1| eukaryotic initiation factor 4A-II, putative [Pediculus humanus
           corporis]
          Length = 449

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 197/359 (54%), Gaps = 25/359 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   GF K S IQ  A    + G+D   Q++SGTGK+  F ++ L + 
Sbjct: 79  DDMGLKEELLRGIYAYGFEKPSAIQQRAIMPCIKGHDVTAQAQSGTGKTATFSISILQQ- 137

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----VQ 139
           I   + + Q +ILAPTRE+A QI  VV ++G  + N      IGGT V    R     V 
Sbjct: 138 IDTSINECQALILAPTRELAQQIQKVVIALGDFM-NAMCHACIGGTNVREDMRKLEHGVH 196

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI  + L  D +++F++DEAD++++ GF + I  ++  L    Q++++S
Sbjct: 197 VVVGTPGRVYDMINRRCLRTDRIKIFVLDEADEMLSRGFKDQIHDVFQTLDVDVQVILLS 256

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---- 255
           AT  HD L   +K+M +P+ I  +     L G+KQ              Y+  E++    
Sbjct: 257 ATMPHDVLEVSKKFMRNPINILVQKDELTLEGIKQF-------------YISVEREEWKF 303

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L       Q VIF N + + +++ + +   +F    + G  +Q+ R   +  F+ 
Sbjct: 304 ETLCDLYETLTITQAVIFCNTRRKVDMLTDFMHKKDFTVSAMHGDMEQREREFIMRQFRS 363

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ +
Sbjct: 364 GSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEQ 422


>gi|427400888|ref|ZP_18892126.1| hypothetical protein HMPREF9710_01722 [Massilia timonae CCUG 45783]
 gi|425720067|gb|EKU82993.1| hypothetical protein HMPREF9710_01722 [Massilia timonae CCUG 45783]
          Length = 609

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 188/351 (53%), Gaps = 13/351 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +  P+ + L++ G+   SPIQ A  P +L G D + Q+++GTGK+  F +  L+  
Sbjct: 10  SDLNLSAPVLKALKDVGYETPSPIQAATIPLLLEGRDVLGQAQTGTGKTAAFALPILSN- 68

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I +    PQ ++LAPTRE+A+Q+ +  +S  AH+K  HV    GG     Q+   +R V 
Sbjct: 69  IDVKKTAPQALVLAPTRELAIQVAEAFQSYAAHIKGFHVLPIYGGQSYGPQLSSLRRGVH 128

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+   I+   L++  +   ++DEAD+++  GF++D+  I  Q P  +Q  + S
Sbjct: 129 VVVGTPGRVIDHIEKGSLDLSQLTTLVLDEADEMLRMGFIDDVEQILQQTPEGRQTTLFS 188

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT         + Y+ DP  +     T     +KQ   L+       +  +D    L ++
Sbjct: 189 ATMPPAIKRIAKTYLRDPAEVTVAAKTGTADNIKQRYWLVA-----GMHKLD---ALTRI 240

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L   PF+  +IF+  +L  E +   L    F A  ++G   Q+ R  +++  K GK+ IL
Sbjct: 241 LEAEPFDGMIIFARTKLGTEELATKLQARGFAATAINGDMAQQQRERTIEQLKNGKIDIL 300

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           V TD+AARG+D   +  VIN ++P D  +Y HR+GR GR G  G  I  ++
Sbjct: 301 VATDVAARGLDVERISHVINYDVPSDPESYTHRIGRTGRAGRSGDAILFIT 351


>gi|399055613|ref|ZP_10743308.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
 gi|398046822|gb|EJL39406.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
          Length = 529

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 192/354 (54%), Gaps = 21/354 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D  + K I Q + + GF + SPIQ A  P VL G D I Q+++GTGK+  F +  + K+
Sbjct: 5   SDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLAGGDLIGQAQTGTGKTAAFGIPLVEKI 64

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQI 140
              P  + Q I+L PTRE+A+Q+   +  +  + K   +  + G   G Q+   ++ VQI
Sbjct: 65  T--PANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTLPIYGGQSIGHQIRALRQGVQI 122

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++ K L +D V   ++DEAD++++ GF+EDI  I + +P  +Q L+ SA
Sbjct: 123 VVGTPGRVMDHLRRKTLKLDHVHTLVLDEADEMLDMGFIEDIETIITHMPEERQTLLFSA 182

Query: 201 TYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK--KL 256
           T   +      +YM  P  + +  E+ T PL+            +    +  D  K   L
Sbjct: 183 TMPPEIKRLATRYMKQPQTIAVSREEVTAPLI------------EQVYYKVFDRNKVESL 230

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L        +IF   +   + + E L +  + A+ L G   Q  R   +++F+ G +
Sbjct: 231 CRILDSEDVELGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMNAFREGSI 290

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
             L+ TD+AARGID  NV  VIN +IP D+ +Y+HR+GR GR G +G+ +T+V+
Sbjct: 291 EFLIATDVAARGIDVGNVSHVINYDIPQDSESYVHRIGRTGRAGRKGIAMTLVT 344


>gi|358391446|gb|EHK40850.1| hypothetical protein TRIATDRAFT_301614 [Trichoderma atroviride IMI
           206040]
          Length = 396

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 131/383 (34%), Positives = 212/383 (55%), Gaps = 23/383 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K 
Sbjct: 26  DDMNLKSELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   V+Q Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    
Sbjct: 85  IDPAVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVRDDMKALQDGPQ 143

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ ++L  D++++F++DEAD++++ GF + I  I+  LP   Q++++S
Sbjct: 144 VVVGTPGRVHDMIQRRFLKTDAMKMFVLDEADEMLSRGFTDQIYDIFQLLPQSTQVVLLS 203

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    ++M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 204 ATMPQDVLEVTTRFMRDPVRILVKKDELTLEGIKQFYIAVEK----------EEWKLDTL 253

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  
Sbjct: 254 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSS 313

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +  
Sbjct: 314 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV-- 371

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              +M EI   ++  +  +P N+
Sbjct: 372 --RMMREIEQFYSTQIEEMPMNV 392


>gi|357135163|ref|XP_003569181.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like
           [Brachypodium distachyon]
          Length = 428

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/357 (36%), Positives = 191/357 (53%), Gaps = 18/357 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + +Q+ GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 51  DFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQID 110

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   ++L  TRE+A QI         ++    V  F GG  ++  K  ++    
Sbjct: 111 --PVAGQVAALVLCHTRELAYQICHEFERFSKYLSETKVAVFYGGVNIKNHKDLLKNECP 168

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K L++ +VR FI+DE DK++++     D+  I+   P  KQ+++
Sbjct: 169 HIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 228

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D A   L G+ Q            L   ++ +KL
Sbjct: 229 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEAEKNRKL 280

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   +   L   NF A  +     Q+ RL    +FK G  
Sbjct: 281 NDLLDALDFNQIVIFVKSVGRASELNRLLCECNFPAICIHSGMTQEERLTRYKNFKEGHK 340

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           RILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 341 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 397


>gi|380493888|emb|CCF33553.1| ATP-dependent RNA helicase DHH1 [Colletotrichum higginsianum]
          Length = 531

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 133/367 (36%), Positives = 197/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FEN  L ++ +  G+ E GF + SPIQ  A P  L G D + ++K+GT
Sbjct: 37  QTEDVTNTKGLEFENFQL-KRDLLMGIFEAGFERPSPIQEEAIPVALTGRDILARAKNGT 95

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL K I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 96  GKTAAFVIPALEK-INPKVSKIQALILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 153

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 154 GLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQL 213

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A        
Sbjct: 214 LQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA-------- 264

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 265 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQ 321

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 322 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 381

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 382 GLAINLI 388


>gi|134096391|ref|YP_001101466.1| cold-shock DeaD box ATP-dependent RNA helicase (partial match)
           [Herminiimonas arsenicoxydans]
 gi|133740294|emb|CAL63345.1| putative ATP-dependent RNA helicase DeaD-like [Herminiimonas
           arsenicoxydans]
          Length = 826

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 190/354 (53%), Gaps = 14/354 (3%)

Query: 21  LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAAL 80
           LF +D+ + +P+ + L+E G+   SPIQ A  P +LN  D + Q+++GTGK+  F +  L
Sbjct: 8   LF-SDLNLSEPLLRVLKELGYEAPSPIQAATIPLLLNNSDVLGQAQTGTGKTAAFALPIL 66

Query: 81  NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKR 136
           ++ I +    PQ ++LAPTRE+A+Q+ +  +   +H+   HV    GG     Q+   +R
Sbjct: 67  SR-IDIKQTTPQALVLAPTRELAIQVAEAFQRYASHIPGFHVLPIYGGQSYGAQLSALRR 125

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            V +VVG+PGR+   ++   L++  ++  ++DEAD+++  GF++D+  I  + P  +Q  
Sbjct: 126 GVHVVVGTPGRVIDHLEKGSLDLSKLKTMVLDEADEMLRMGFIDDVETILQKTPEARQTA 185

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT           Y+ DP LI     T     ++Q   L+   +        + + L
Sbjct: 186 LFSATMPSAIKRIATTYLRDPELITVAAKTGTADNIRQRYWLVSGMQ--------KLEAL 237

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L    F+  +IF+  +L  E +   L    F A  ++G   Q+ R  ++   K GK+
Sbjct: 238 TRILEAETFDGMIIFARTKLGTEELAGKLQARGFSAAAINGDIQQQQRERTIQQLKDGKI 297

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            ILV TD+AARG+D   +  VIN ++PHD  +Y HR+GR GR G  G  I  ++
Sbjct: 298 DILVATDVAARGLDVERISHVINYDVPHDPESYTHRIGRTGRAGRSGEAILFIA 351


>gi|50425797|ref|XP_461495.1| DEHA2F26598p [Debaryomyces hansenii CBS767]
 gi|49657164|emb|CAG89921.1| DEHA2F26598p [Debaryomyces hansenii CBS767]
          Length = 474

 Score =  197 bits (502), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/344 (35%), Positives = 186/344 (54%), Gaps = 21/344 (6%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
            G+ E GF K SP+Q  + P  L G D + ++K+GTGK+  FV+  L +  +  V + Q 
Sbjct: 1   MGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQ-ARPKVNKIQA 59

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRPVQIVVGSPGRIK 149
           +IL PTRE+A+Q + VVR++G H+  L      GGT     + R   PV ++VG+PGR+ 
Sbjct: 60  LILVPTRELALQTSQVVRTLGKHL-GLQCMVTTGGTSLRDDILRLNDPVHVLVGTPGRVL 118

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
            +   K  ++    LF+MDEADK+++  F   I  I +  P  +Q L+ SAT+     + 
Sbjct: 119 DLASRKVADLSECPLFVMDEADKMLSREFKGIIEQILAFFPTTRQSLLFSATFPLAVKSF 178

Query: 210 LQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV---QLLSQTPFN 266
           + +++  P  I   D    L G+ Q  A           +V+E++KL     L S+   N
Sbjct: 179 MDQHLTKPYEINLMDELT-LRGISQFYA-----------FVEEKQKLHCLNTLFSKLQIN 226

Query: 267 QCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAA 326
           Q +IF N   R E++ + +    +   Y      Q AR      F++GKVR+LV +DL  
Sbjct: 227 QAIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQHARNKVFHEFRQGKVRVLVCSDLLT 286

Query: 327 RGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           RGID   V++VIN + P  A TYLHR+GR+GR+G  GL I ++S
Sbjct: 287 RGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 330


>gi|366991001|ref|XP_003675268.1| hypothetical protein NCAS_0B08130 [Naumovozyma castellii CBS 4309]
 gi|342301132|emb|CCC68897.1| hypothetical protein NCAS_0B08130 [Naumovozyma castellii CBS 4309]
          Length = 396

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 117/331 (35%), Positives = 188/331 (56%), Gaps = 12/331 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   GF   S IQ  A   ++ G+D + Q++SGTGK+  F +AAL + 
Sbjct: 26  DDMNLDEKLLRGVFGYGFEDPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQR- 84

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ-VERPK--RPVQI 140
           I   ++ PQ ++LAPTRE+A+QI  VV ++  H+ ++ V   IGGT  VE  +  R  QI
Sbjct: 85  IDTSIKAPQALMLAPTRELALQIQKVVMALAFHM-DVKVHACIGGTSFVEDAEGLRDAQI 143

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   I+ +    DS+++FI+DEAD+++++GF E I  I++ LPP  Q++++SA
Sbjct: 144 VVGTPGRVFDNIQRRRFRTDSIKMFILDEADEMLSSGFKEQIYQIFTMLPPTTQVVLLSA 203

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T   D L    K+M +P+ I  +     L G+KQ    + E      +Y    + L  L 
Sbjct: 204 TMPRDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEE---EQFKY----ECLTDLY 256

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
                 Q VIF N + + E + + L   +F    +     Q+ R   +  F+ G  RIL+
Sbjct: 257 DSISVTQAVIFCNTRRKVEELTQKLTADDFTVSAIYSDLPQQERDTIMKEFRSGSSRILI 316

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLH 351
           +TDL ARGID   V LVIN ++P +   Y+H
Sbjct: 317 STDLLARGIDVQQVSLVINYDLPTNKENYIH 347


>gi|336274134|ref|XP_003351821.1| hypothetical protein SMAC_00367 [Sordaria macrospora k-hell]
          Length = 372

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 131/378 (34%), Positives = 206/378 (54%), Gaps = 29/378 (7%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I +G+   GF + S IQ  A   V+ G+D I Q++SGTGK+  F ++ L K I   ++  
Sbjct: 10  IPEGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK-IDPTLKAC 68

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGR 147
           Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +Q    +VVG+PGR
Sbjct: 69  QALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALQDGPQVVVGTPGR 127

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           +  MI+ ++L  DS+++F++DEAD++++ GF E I  I+  LP   Q++++SAT   D L
Sbjct: 128 VHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVL 187

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LVQLLS 261
               K+M +P+ I  +     L G+KQ              Y+  EK+      L  L  
Sbjct: 188 EVTTKFMREPVRILVKKDELTLEGIKQF-------------YIAVEKEEWKLDTLSDLYE 234

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
                Q VIF N + + + + + L   +F    + G  DQ  R   +  F+ G  R+L+ 
Sbjct: 235 TVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIA 294

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLM 381
           TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +     +M
Sbjct: 295 TDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV----RMM 350

Query: 382 GEINLDHAFNVGLVPDNL 399
            EI   ++  +  +P N+
Sbjct: 351 REIEQFYSTQIEEMPMNV 368


>gi|403214735|emb|CCK69235.1| hypothetical protein KNAG_0C01220 [Kazachstania naganishii CBS
           8797]
          Length = 397

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 123/340 (36%), Positives = 191/340 (56%), Gaps = 24/340 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +E  + +G+   GF + S IQ  A   ++ G+D + Q++SGTGK+  F +AAL + 
Sbjct: 27  DDMNLEPNLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQR- 85

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ-VERPK--RPVQI 140
           I   ++ PQ ++LAPTRE+A+QI  VV S+  H+ NL V   IGGT  +E  +  R  QI
Sbjct: 86  IDPAIKNPQALMLAPTRELALQIQKVVMSLSFHM-NLKVHACIGGTSFIEDAEGLRDAQI 144

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   I+ +    D++++FI+DEAD+++++GF E I  I++ LPP  Q++++SA
Sbjct: 145 VVGTPGRVFDNIQRRRFKTDNIKMFILDEADEMLSSGFKEQIYEIFTMLPPTTQVVLLSA 204

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK----- 255
           T   D L    K+M  P+ I  +     L G+KQ              YV+ E++     
Sbjct: 205 TMPRDVLEVTTKFMRSPVRILVKKDELTLEGIKQF-------------YVNVEQEQYKYE 251

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + E + + L   NF    +     Q+ R   +  F+ G
Sbjct: 252 CLTDLYESIAVTQAVIFCNTRRKVEELTQRLTADNFTVSAIYSDLPQQERDTIMKEFRSG 311

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
             RIL++TDL ARGID   V LVIN ++P +   Y+HR+G
Sbjct: 312 SSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIG 351


>gi|403052034|ref|ZP_10906518.1| ATP-dependent RNA helicase RhlB [Acinetobacter bereziniae LMG 1003]
 gi|445418409|ref|ZP_21434896.1| DEAD/DEAH box helicase [Acinetobacter sp. WC-743]
 gi|444760745|gb|ELW85181.1| DEAD/DEAH box helicase [Acinetobacter sp. WC-743]
          Length = 383

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 113/354 (31%), Positives = 198/354 (55%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQ-- 89
           ++Q +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+V+ +N L+  P+Q  
Sbjct: 14  LKQAIDALGFKEMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLVSIINDLLNNPIQTQ 73

Query: 90  ----QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
               +P+ +ILAPTRE+A+QI +  + +      L+V   +GG   ++ ++      V I
Sbjct: 74  RFRGEPRALILAPTRELAIQIENDAKDL-VKYSGLNVVTLVGGVDFDKQRKQLDQGFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+    + K + +D +   ++DEAD+L++ GF+  +  I  +S     +Q L+ 
Sbjct: 133 LVATPGRLIDFTEQKEIWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   Q+++ +P+ +  E   +    V+Q V ++ +         D+ K L +
Sbjct: 193 SATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYVVEK--------KDKYKLLRE 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L+  P  + +IF+N + +   + ++L    +    LSG   Q  RL  LD FK GK  I
Sbjct: 245 ILTDEPIEKVMIFANRRDQVRKLYDHLKADGYKVVMLSGEIAQDKRLKMLDQFKNGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  VIN  +P  +  Y+HR+GR GR GT+G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGTQGVSISFLSED 358


>gi|350272022|ref|YP_004883330.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
 gi|348596864|dbj|BAL00825.1| putative RNA helicase [Oscillibacter valericigenes Sjm18-20]
          Length = 558

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 111/345 (32%), Positives = 188/345 (54%), Gaps = 12/345 (3%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           + + E GF + + IQ  + P +  G D + +S++GTGK++ F + A+ +++       Q 
Sbjct: 17  EAVTEMGFTEATDIQAESIPLIRTGADVLARSQTGTGKTVAFGIPAVERILA-DAWNVQV 75

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---IVVGSPGRIKQ 150
           ++L+PTRE+A Q  + +R +  H+  + V    GG       R +Q   +V+G+PGRI  
Sbjct: 76  LVLSPTRELAHQCGEEIRKLAHHLPYVKVADIFGGADYRGQFRELQSANLVIGTPGRIMD 135

Query: 151 MIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATL 210
            ++   L++  ++L I+DEAD+++N GF EDI  I   +P  +Q+++ SAT   + L   
Sbjct: 136 HMRRGTLDLSHLKLVILDEADEMLNMGFREDIEVILQDVPADRQIVLFSATIPEEILTIA 195

Query: 211 QKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVI 270
           Q++   P+ I        L  ++Q+   +P  + P        + L  LL      + +I
Sbjct: 196 QQFQRSPIRIEINREQITLENIRQVYVEVPPRQKP--------EALTLLLHYYQPRRALI 247

Query: 271 FSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGID 330
           FSN +   + + E L+ A F  E L G   Q  R   ++ F++G+V ILV TD+AARGID
Sbjct: 248 FSNTKTMVDELTERLSAAGFSVEGLHGDMKQLQRTTVMNGFRKGRVSILVATDVAARGID 307

Query: 331 AANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
            +++D VIN +IP +  +Y+HR+GR GR G  G  IT+    + V
Sbjct: 308 VSDLDYVINFDIPKEPDSYVHRIGRTGRAGRAGTAITLCCGRAQV 352


>gi|221053806|ref|XP_002258277.1| eukaryotic initiation factor [Plasmodium knowlesi strain H]
 gi|193808110|emb|CAQ38814.1| eukaryotic initiation factor, putative [Plasmodium knowlesi strain
           H]
          Length = 390

 Score =  197 bits (502), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 207/385 (53%), Gaps = 22/385 (5%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FEN + I++ + +G+   GF K S IQ      +L+G D I+QS+SGTGK+ VF V ALN
Sbjct: 19  FEN-IGIDEGLLRGIYAYGFEKPSAIQQRGIKPILSGRDVILQSQSGTGKTCVFAVGALN 77

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYF--IGGTQ----VERPK 135
             +   + + Q IIL+PTRE+A Q   V  ++  ++   HV  +  IGG +    ++   
Sbjct: 78  -CVNRNLSETQVIILSPTRELAEQTQKVCLALADYI---HVTIYCCIGGKKMSDDIKALN 133

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
             V I+ G+PGRI  M+ L++L    ++  ++DEAD+++N GF E +  IY  L P  Q+
Sbjct: 134 NGVHIISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQI 193

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
           ++ SAT   + L    K+M  P+ I  +     L G+KQ    I   +    +Y    + 
Sbjct: 194 VLSSATLPQEVLEITNKFMHRPVKILVKRDELTLEGIKQFFVSI---EKEQWKY----ET 246

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L  L       Q V+F N +++ + + + +  ANF    +     Q  R   +  F++ K
Sbjct: 247 LADLYESLTITQAVVFCNTKMKVDWLTKKMQEANFTVCKMHAGMSQSERDDIMLKFRQCK 306

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
            R+L++TD+  RG+D   V LV+N ++P+   +Y+HR+GR+GR+G +G+ I  V  + + 
Sbjct: 307 FRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDI- 365

Query: 376 KFHSLMGEINLDHAFNVGLVPDNLT 400
               ++ +I   ++  +  +P N+T
Sbjct: 366 ---KILRDIEQYYSTQIDEMPMNIT 387


>gi|2500516|sp|Q40470.1|IF4A7_TOBAC RecName: Full=Eukaryotic initiation factor 4A-7; Short=eIF-4A-7;
           AltName: Full=ATP-dependent RNA helicase eIF4A-7
 gi|485949|emb|CAA55738.1| unnamed protein product [Nicotiana tabacum]
          Length = 413

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 125/355 (35%), Positives = 190/355 (53%), Gaps = 37/355 (10%)

Query: 35  GLQEN--------GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKL 86
           GLQEN        GF K S IQ         G D I Q++SGTGK+  F    L +L   
Sbjct: 46  GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-DY 104

Query: 87  PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVV 142
            + + Q ++LAPTRE+A QI  V+R++G ++  + V   +GGT V   +R +Q    +VV
Sbjct: 105 SLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQSGVHVVV 163

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+  M++ + L  D +++F++DEAD++++ GF + I  I+  LPP  Q+ V SAT 
Sbjct: 164 GTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATM 223

Query: 203 SHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK----- 255
             + L   +K+M  P  +L++ +D T  L G+KQ              YV+ +K+     
Sbjct: 224 PPEALEITRKFMNKPVRILVKRDDVT--LEGIKQF-------------YVNVDKEEWKLE 268

Query: 256 -LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L  L       Q VIF N + + + + + +   +       G  DQ  R   +  F+ G
Sbjct: 269 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRTRDHTVSATHGDMDQNTRDIIMREFRSG 328

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
             R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V
Sbjct: 329 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 383


>gi|145502420|ref|XP_001437188.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404337|emb|CAK69791.1| unnamed protein product [Paramecium tetraurelia]
          Length = 395

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 123/374 (32%), Positives = 206/374 (55%), Gaps = 26/374 (6%)

Query: 11  TKDVLSNIDVLFEN--DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSG 68
           T+D+  N +   E   ++ + K + +G+   GF + S IQ  A   ++ G D + Q++SG
Sbjct: 5   TQDLQENWNEQVETFEELTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSG 64

Query: 69  TGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG 128
           TGK+  F + AL + I    ++ Q IILAP RE+A QI DVV+ +G ++ N+     IGG
Sbjct: 65  TGKTGTFTIGALQR-IDPNQRKTQVIILAPVRELAKQIYDVVKGIGQYL-NIEAFCCIGG 122

Query: 129 TQV----ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITW 184
           T      E+ K+ V I++ +PGR+  M+K KYL+   +RL ++DEAD++++ GF ++   
Sbjct: 123 TSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFAE 182

Query: 185 IYSQLPPMKQMLVVSATYSHDNLATLQKYMVD---PLLIRPEDATRPLLGVKQLVALIPE 241
           I   +P   Q+ + SAT+  + +   ++++ +    +L++ E  T  L G++Q    I +
Sbjct: 183 ILKMVPGDIQIALFSATFPQEIIELSKQFLREGTAKILVKKEQLT--LEGIRQFYIAIQQ 240

Query: 242 CKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGA 298
                     E++K   LV+L      +Q ++F N +   + + + L    F    +   
Sbjct: 241 ----------EDQKFRVLVELYKNLTVSQSILFCNSKKTVDDLHDKLTAEGFTVSKIHSQ 290

Query: 299 QDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGR 358
            +QK R   +  FK+G  RILV+TDL  RGID   + LVIN E P     Y+HR+GRAGR
Sbjct: 291 MEQKEREQVMQEFKKGAARILVSTDLMGRGIDVQQLSLVINYEFPRLKEQYIHRVGRAGR 350

Query: 359 YGTRGLVITIVSAE 372
           YG +G+ I +V+ +
Sbjct: 351 YGRKGVAINMVAQQ 364


>gi|410860280|ref|YP_006975514.1| ATP-dependent RNA helicase [Alteromonas macleodii AltDE1]
 gi|410817542|gb|AFV84159.1| ATP-dependent RNA helicase [Alteromonas macleodii AltDE1]
          Length = 586

 Score =  197 bits (501), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 199/360 (55%), Gaps = 16/360 (4%)

Query: 16  SNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVF 75
           + +D+ F+ D+ + +PI Q L++ G+ K SPIQ  + P +L G+D + Q+++GTGK+  F
Sbjct: 3   TTVDMTFK-DLNLPEPILQALEKVGYEKPSPIQAESIPLLLEGHDLLGQAQTGTGKTAAF 61

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQV 131
            +  L   I    ++PQ ++LAPTRE+A+Q+ +  +   +  + + V    GG     Q+
Sbjct: 62  ALPMLAN-IDPEQRKPQLLVLAPTRELAIQVAEAFQVYASFSQKIKVLPVYGGQSYDNQI 120

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
            + KR VQ+VVG+PGRI   IK K L++  ++  ++DEAD+++  GF++D+  I S  P 
Sbjct: 121 RQLKRGVQVVVGTPGRIIDHIKRKTLDLSELKYLVLDEADEMLRMGFIDDVELILSHAPE 180

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALI-PECKNPSLRYV 250
            +Q  + SAT         Q+Y+ DP  ++          ++Q    I P  K       
Sbjct: 181 ERQTALFSATMPGPIKKITQRYLKDPKHVKIASKVSTASTIRQRYCQIAPHHKL------ 234

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
              + L +++    F+  +IF   +     + + L+   +  E L+G   Q AR  +++ 
Sbjct: 235 ---EALTRIMEVEAFDGMIIFVRTKTATVELADKLSARGYDVEPLNGDIPQSARERTVEK 291

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            K+G++ ILV TD+ ARG+D   V  VIN +IP+D+ +Y+HR+GR GR G +G  I  +S
Sbjct: 292 LKQGQIDILVATDVVARGLDVERVSHVINYDIPYDSESYVHRIGRTGRAGRQGDAILFIS 351


>gi|398814336|ref|ZP_10573017.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
 gi|398036605|gb|EJL29814.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
          Length = 529

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 194/354 (54%), Gaps = 21/354 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D  + K I Q + + GF + SPIQ A  P VL+G D I Q+++GTGK+  F +  + K+
Sbjct: 5   SDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLDGGDLIGQAQTGTGKTAAFGIPLVEKI 64

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQI 140
              P  + Q I+L PTRE+A+Q+   +  +  + K   +  + G   G Q+   ++ VQI
Sbjct: 65  T--PANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTLPIYGGQSIGHQIRALRQGVQI 122

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++ K L +D+V   ++DEAD++++ GF+EDI  I + +P  +Q L+ SA
Sbjct: 123 VVGTPGRVMDHLRRKTLKLDNVHTLVLDEADEMLDMGFIEDIETIINHMPDERQTLLFSA 182

Query: 201 TYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK--KL 256
           T   +      +YM  P  + +  E+ T PL+            +    +  D  K   L
Sbjct: 183 TMPPEIKRLATRYMKQPQTIAVSREEVTAPLI------------EQVYYKVFDRNKVESL 230

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L        +IF   +   + + E L +  + A+ L G   Q  R   +++F+ G +
Sbjct: 231 CRILDSEDVELGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMNAFREGSI 290

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
             L+ TD+AARGID  NV  VIN +IP D+ +Y+HR+GR GR G +G+ +T+V+
Sbjct: 291 EFLIATDVAARGIDVGNVSHVINYDIPQDSESYVHRIGRTGRAGRKGIAMTLVT 344


>gi|401837943|gb|EJT41779.1| hypothetical protein SKUD_187305 [Saccharomyces kudriavzevii IFO
           1802]
          Length = 429

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 135/377 (35%), Positives = 217/377 (57%), Gaps = 20/377 (5%)

Query: 14  VLSNID-VLFE-NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGK 71
           +L+N D V+++ +D+ +++ + +G+   GF + S IQ  A   ++ G+D + Q++SGTGK
Sbjct: 47  ILTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGK 106

Query: 72  SIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ- 130
           +  F +AAL + I   V+ PQ ++LAPTRE+A+QI  VV ++  H+ ++ V   IGGT  
Sbjct: 107 TGTFSIAALQR-IDTSVKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSF 164

Query: 131 VERPK--RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
           VE  +  R  QIVVG+PGR+   I+ +    D +++FI+DEAD+++++GF E I  I++ 
Sbjct: 165 VEDAEGLRDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTV 224

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q++++SAT  +D L    K+M +P+ I  +     L G+KQ    + E      +
Sbjct: 225 LPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEE---EDFK 281

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           Y    + L  L       Q VIF N + + E +   L +  F    +     Q+ R   +
Sbjct: 282 Y----ECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRDDKFTVSAIYSDLPQQERDTIM 337

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G  RIL++TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  
Sbjct: 338 KEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINF 397

Query: 369 VSAE------SLVKFHS 379
           V+ E       L KF+S
Sbjct: 398 VTNEDVGAMRELEKFYS 414


>gi|126323154|ref|XP_001366378.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like [Monodelphis
           domestica]
          Length = 427

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 126/383 (32%), Positives = 203/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L ++ 
Sbjct: 48  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQI- 106

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPV 138
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++      K   
Sbjct: 107 -EPVDGQVTVLVMCHTRELAFQISKEYERFSKYMPNVKVSVFFGGLSIKKDEDVLKKNCP 165

Query: 139 QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            +VVG+PGRI  +++ K LN+ +V+ F++DE DK++       D+  I+   P  KQ ++
Sbjct: 166 HVVVGTPGRILALVRNKSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMM 225

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ +  +D T+  L G++Q            L+  ++ +KL
Sbjct: 226 FSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYV--------KLKDSEKNRKL 277

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 278 FDLLDVLEFNQVVIFVKSVQRCVALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQR 337

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E   K
Sbjct: 338 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAK 397

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      NV  +P+ +
Sbjct: 398 ---ILNDVQDRFEVNVAELPEEI 417


>gi|332376787|gb|AEE63533.1| unknown [Dendroctonus ponderosae]
          Length = 424

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 129/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  I + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 46  DFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQL- 104

Query: 85  KLPVQQP-QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             P +     +++  TRE+A QI+        ++ ++ V  F GG  +++ +  ++    
Sbjct: 105 -EPTENVVYVLVMCHTRELAFQISKEYERFSKYMPSIKVGVFFGGLPIQKDEEMLKNNCP 163

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  ++K K LN+  ++ FI+DE DK++       D+  IY   P  KQ+++
Sbjct: 164 HIVVGTPGRILALVKSKKLNLKHLKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMM 223

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S D     +K+M DP+ +  +D  +  L G++Q    + E +     +       
Sbjct: 224 FSATLSKDIRPICKKFMQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLF------- 276

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            +LL    FNQ VIF     R   + + L   NF A  +    DQK RL+  + FK  + 
Sbjct: 277 -ELLDVLEFNQVVIFVKSVQRCVALAQLLTEQNFPAIGIHRGMDQKERLSRYEQFKDFQK 335

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS ES  K
Sbjct: 336 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSEESDAK 395

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ E+      N+  +PD +
Sbjct: 396 ---ILNEVQDRFDVNITELPDEI 415


>gi|429728801|ref|ZP_19263505.1| putative DEAD-box ATP-dependent RNA helicase CshA
           [Peptostreptococcus anaerobius VPI 4330]
 gi|429147776|gb|EKX90798.1| putative DEAD-box ATP-dependent RNA helicase CshA
           [Peptostreptococcus anaerobius VPI 4330]
          Length = 547

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 121/361 (33%), Positives = 195/361 (54%), Gaps = 13/361 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ +++ I + + + G+ + SPIQ  A P VL GYD I Q+++GTGK+  F +  L K 
Sbjct: 7   NELAVKEEITRAIADLGYEQPSPIQAKAIPVVLEGYDVIGQAQTGTGKTAAFSIPLLEK- 65

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQ 139
           I    ++ Q I+L PTRE+A+Q+++ VR +  ++  +      GG  ++R     K  VQ
Sbjct: 66  IDPSDKRLQAIVLCPTRELAIQVSEEVRKLAKYLHGVKTLPIYGGQPIDRQIKALKGGVQ 125

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +++G+PGR+   I  K L   +V++ +MDEAD++++ GF EDI  I S  P  +Q  + S
Sbjct: 126 VIIGTPGRVIDHINRKTLKPSTVKMVVMDEADEMLDMGFREDIETILSSTPQERQTSLFS 185

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT     L   QKY  +P+ I+     R  L V  +     E      R  ++ + L +L
Sbjct: 186 ATMPKAILELTQKYQKEPVHIK---VVRKELTVNNIKQFYIET-----RKSNKLEVLTRL 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           +        V+F+N +   + +  +L    +GA+ L G   Q  R   +D F+ G + IL
Sbjct: 238 IDVYNPKLTVVFTNTKKGADELVSDLQARGYGADSLHGDLKQVQRDIVMDKFRHGTIDIL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHS 379
           V TD+AARGID  +V+ VIN E+P D   Y+HR+GR GR G  G+  + V    + K   
Sbjct: 298 VATDVAARGIDVDDVECVINYELPQDEEYYVHRIGRTGRAGRDGIAFSFVFGREMRKLKD 357

Query: 380 L 380
           +
Sbjct: 358 I 358


>gi|334144539|ref|YP_004537695.1| DEAD/DEAH box helicase domain-containing protein
           [Thioalkalimicrobium cyclicum ALM1]
 gi|333965450|gb|AEG32216.1| DEAD/DEAH box helicase domain protein [Thioalkalimicrobium cyclicum
           ALM1]
          Length = 599

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 170/620 (27%), Positives = 291/620 (46%), Gaps = 44/620 (7%)

Query: 19  DVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVA 78
           DV FE+  LI + + + LQ+ G+   SPIQ  A P +L G D +  +++GTGK+  F + 
Sbjct: 7   DVTFESFNLIPQ-VLKALQDVGYETPSPIQAQAIPPILEGRDILGMAQTGTGKTAAFALP 65

Query: 79  ALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERP 134
            L++ + +     Q ++LAPTRE+A+Q+ +  +S   H+K  HV    GG     Q+   
Sbjct: 66  LLSR-VDIQNTNTQILVLAPTRELAIQVAEAFQSFAHHMKGFHVLPIYGGQEYGGQIRAL 124

Query: 135 KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
           KR  Q+VVG+PGR+   ++   L +D+++  ++DEAD+++  GF++D+ W+  Q P  +Q
Sbjct: 125 KRGAQVVVGTPGRVMDHMRKGTLKLDNLQALVLDEADEMLRMGFIDDVEWVLEQTPQDRQ 184

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
           + + SAT   +      K++ +P+ +  +  T     + Q   L+       L  +D   
Sbjct: 185 IALFSATMPKEVHKIASKHLNNPVEVIIKQKTGTASTISQSYWLVS-----GLHKLD--- 236

Query: 255 KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRG 314
            L ++L  T F+  +IF   +     + E L    + A  L+G   Q  R   +D  K+G
Sbjct: 237 ALTRILEATEFDGMIIFVRTKTATIELAEKLEARGYAAAALNGDIAQNHRERIVDQLKKG 296

Query: 315 KVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           K+ IL+ TD+ ARG+D   +  V+N +IP+D  +Y+HR+GR GR G  G  I  V+    
Sbjct: 297 KIDILIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRSGNAILFVAPRE- 355

Query: 375 VKFHSLMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPLDQAQEREDVE---QTA 431
                L+ +I  + A N  +    L   Q    QRV+   A+  D A E+E +E   Q  
Sbjct: 356 ---RRLLQQI--ERATNKKIDMLTLPSTQDINDQRVEKFKARITD-ALEQEGLEFYQQMI 409

Query: 432 EESSKVENTKPLRGAPSKEVTKKGASKEGTKWNLTDGQSEEESDSENDGKPDENGSQRGS 491
           E+  +  N   L  A +     +G +     + L D    + S  ++D         RGS
Sbjct: 410 EDLQQSSNVPALEIAAALAKLAQGDA----PFFLEDKPIRQASFRDDD---------RGS 456

Query: 492 KRSKEFKTQEKCVKGAGE----DENGDRKASKDEQKIDGANSAEKSLEDKHGKKITNSFE 547
           + +++F  +++  +G GE     E   R+   D     G      ++   +G K  N   
Sbjct: 457 RGARDFG-RDRPARGRGERGDRTERAPRRPRVDGPPESGMKRYRINVGFANGVKPGNIIG 515

Query: 548 AVGEIVQNDTETTKENNQTDEVPEENGLVGNPNKAEVGDLNECESCTDSFHMNEHSDEND 607
           A+      D  + ++ N  D     + L  + +KA++  L +   C     + E  D   
Sbjct: 516 AIANEANIDGASIRQLNIQDGFSLVD-LPADLSKAQLATLKKTWICGQPADLTEVRDTAA 574

Query: 608 L-GNNTKESQKQKGHKSKKK 626
             G   K S+K  G    K+
Sbjct: 575 TPGARPKLSRKPAGAPRTKR 594


>gi|326498121|dbj|BAJ94923.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326527983|dbj|BAJ89043.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 495

 Score =  197 bits (501), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 199/382 (52%), Gaps = 22/382 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 111 QTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 169

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G H+K + V    GGT
Sbjct: 170 GKTAAFCIPALEK-IDQDKNAIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGT 227

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R  +PV ++VG+PGR+  + K     +    + IMDEADKL++  F   +  +
Sbjct: 228 SLKDDIVRLYQPVHLIVGTPGRVLDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQL 287

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+     A   KY+  P +I   D    L G+ Q  A        
Sbjct: 288 IRYLPSSRQILMFSATFPVTVKAFKDKYLPKPYVINLMDELT-LKGITQFYA-------- 338

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 339 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 395

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P +A TYLHR+GR+GR+G  
Sbjct: 396 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHL 455

Query: 363 GLVITIVSAESLVKFHSLMGEI 384
           GL + +++ E     + +  E+
Sbjct: 456 GLAVNLITYEDRFNLYRIEQEL 477


>gi|147905268|ref|NP_001080733.1| nuclear RNA helicase [Xenopus laevis]
 gi|28280049|gb|AAH45125.1| Ddx39-prov protein [Xenopus laevis]
          Length = 427

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 204/382 (53%), Gaps = 19/382 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L + I
Sbjct: 48  DFLLKPELLRSIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQ-I 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
           +    Q   +++  TRE+A QI+        ++  + V  F GG  +++ +  ++     
Sbjct: 107 EAVEGQVSVLVMCHTRELAFQISKEYERFSKYMPTVEVAVFFGGLSIKKDEDTIRKSCPH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +++ K LN+ +V+ F++DE DK++       D+  I+   P  KQ ++ 
Sbjct: 167 IVVGTPGRILALVRSKILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ +  +D T+  L G++Q            L+  ++ +KL 
Sbjct: 227 SATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYV--------KLKDSEKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + R
Sbjct: 279 DLLDVLEFNQVVIFVKSVQRCMALAQLLIEQNFPAIAIHRNMSQEERLSRYQQFKDFQRR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           ILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E   K 
Sbjct: 339 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAK- 397

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ ++      NVG +P+ +
Sbjct: 398 --ILNDVQDRFEVNVGELPEEI 417


>gi|308071203|ref|YP_003872808.1| ATP-dependent RNA helicase [Paenibacillus polymyxa E681]
 gi|305860482|gb|ADM72270.1| Probable ATP-dependent RNA helicase [Paenibacillus polymyxa E681]
          Length = 559

 Score =  197 bits (501), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 195/348 (56%), Gaps = 14/348 (4%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +E+   + L+E G    +P+Q  + P ++ G D I ++ +GTGK++ F++  L KL  L 
Sbjct: 19  VEQHWVEALKEQGISSPTPVQQESIPLLMEGQDVIAEAHTGTGKTLAFLLPILQKL-NLD 77

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
            + PQ +++APTRE+A+QIT+    + A   +L +    GG  VER  R +    Q+++G
Sbjct: 78  KRHPQALVIAPTRELALQITEEANRLAATEPSLSLLAVYGGQDVERQLRKLKGGAQLIIG 137

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   ++   L++  +++ ++DEAD++++ GF+ D+  I  ++P  +Q ++ SAT  
Sbjct: 138 TPGRLLDHLRRGTLDLGGIKMLVLDEADQMLHMGFLNDVETILQEVPYRRQTMLFSATMP 197

Query: 204 HDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQ 262
                  + YM +P+ ++ + A+  P+  ++Q+V    +          +++ LV +L+ 
Sbjct: 198 AGIRKLARVYMNEPVDVKVKSASSVPVSQIRQVVVQTTDR--------GKQQALVDMLNT 249

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
                 VIF   + R   + E L    F +  L G   Q  R   + +F+  K+++LV T
Sbjct: 250 DRPYLAVIFCRTKRRAAKLNEELQEMGFESGELHGDLSQNKREQVMKAFREAKLQLLVAT 309

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           D+AARG+D   V  V N ++P DA +Y+HR+GR GR G +G+ +T+ +
Sbjct: 310 DVAARGLDVEGVTHVFNYDMPQDAESYIHRIGRTGRAGGKGVAVTLAT 357


>gi|213158663|ref|YP_002319961.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii AB0057]
 gi|417574004|ref|ZP_12224858.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC-5]
 gi|421642751|ref|ZP_16083263.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-235]
 gi|421646857|ref|ZP_16087296.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-251]
 gi|421701131|ref|ZP_16140639.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-58]
 gi|421802300|ref|ZP_16238253.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC1]
 gi|213057823|gb|ACJ42725.1| DEAD/DEAH box helicase [Acinetobacter baumannii AB0057]
 gi|400209572|gb|EJO40542.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC-5]
 gi|404568185|gb|EKA73291.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-58]
 gi|408512203|gb|EKK13849.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-235]
 gi|408517003|gb|EKK18554.1| DEAD/DEAH box helicase [Acinetobacter baumannii IS-251]
 gi|410404097|gb|EKP56170.1| DEAD/DEAH box helicase [Acinetobacter baumannii Canada BC1]
          Length = 383

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 110/354 (31%), Positives = 200/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PVQ+ 
Sbjct: 14  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPVQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    +S+     NLH+   +GG   ++ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAKSL-TKFSNLHLVTLLGGVDFDKQKKQLDANFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 133 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+++D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ + L  
Sbjct: 193 SATFTYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAK--------QDKYRLLQD 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  L+ FK+GK  I
Sbjct: 245 ILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|432328452|ref|YP_007246596.1| DNA/RNA helicase, superfamily II [Aciduliprofundum sp. MAR08-339]
 gi|432135161|gb|AGB04430.1| DNA/RNA helicase, superfamily II [Aciduliprofundum sp. MAR08-339]
          Length = 450

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 119/356 (33%), Positives = 201/356 (56%), Gaps = 27/356 (7%)

Query: 33  RQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQ 92
           ++ L+ +GF + + +Q +     ++G D IVQSK+G+GK++ F++    KL +      +
Sbjct: 13  KKVLELHGFKEPTEVQESVIGPAIDGMDLIVQSKTGSGKTLAFLIPIFEKLNR----GLE 68

Query: 93  TIILAPTREIAVQITDVVRSVG-AHVKNLHVDYFIGGTQVERPKRPVQ---IVVGSPGRI 148
            I+L PTRE+A Q+  V R +   H K+  V Y  GG  +E   R ++   +V+G+PGR+
Sbjct: 69  AIVLVPTRELAQQVDRVARILAKGHGKSTVVIY--GGVSMENQIRGLKHASVVIGTPGRV 126

Query: 149 KQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLA 208
             +++  YL++  +++F++DEAD++++ GF+EDI WI S+ P  KQM++ SAT   + + 
Sbjct: 127 MDLMRRGYLDLSRIKIFVLDEADRMLDMGFIEDIRWILSKAPREKQMMLFSATMPQEIIN 186

Query: 209 TLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD--EEKKLVQLLSQ--TP 264
             + YM +P  I        +L   ++ A     +N S  YV+  E  K+ +L S     
Sbjct: 187 LARHYMSNPEKI--------ILSADEITA-----ENVSQFYVEVGEINKIAKLSSLIINE 233

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             + ++F N +   + + E L    F A  L G   Q +R  ++D+FK+GK+ IL++TD+
Sbjct: 234 GGKYLVFCNTKRNTKSVAEILQKYGFRAFALHGDMRQASRSRTMDAFKQGKINILISTDV 293

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL 380
           AARGID   +  V+N ++P     Y+HR+GR GR   RG  IT VS E +  F  +
Sbjct: 294 AARGIDVHGITHVVNYDVPQYPKDYVHRIGRTGRLDARGKAITFVSREEMEYFRRI 349


>gi|400598680|gb|EJP66389.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
          Length = 528

 Score =  197 bits (501), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/370 (35%), Positives = 196/370 (52%), Gaps = 22/370 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV     + FEN  L ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 65  QTEDVTKTKGLEFENFAL-KRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGT 123

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL + I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 124 GKTAAFVIPALER-INPKVNKIQCLILVPTRELAMQTSQVCKTLGKHL-GVNVMVTTGGT 181

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R   PV +VVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 182 GLRDDILRLAEPVHVVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSAEFTPTIEQL 241

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         + M  P  I   D    L G+ Q  A        
Sbjct: 242 LRFHPKDRQVMLFSATFPLSVKDFSDRNMSSPYEINLMDELT-LRGITQYYA-------- 292

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 293 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQ 349

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 350 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 409

Query: 363 GLVITIVSAE 372
           GL I +++ E
Sbjct: 410 GLAINLINWE 419


>gi|374307851|ref|YP_005054282.1| ATP-dependent RNA helicase DeaD [Filifactor alocis ATCC 35896]
 gi|291166137|gb|EFE28183.1| ATP-dependent RNA helicase DeaD [Filifactor alocis ATCC 35896]
          Length = 539

 Score =  197 bits (501), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 113/339 (33%), Positives = 195/339 (57%), Gaps = 11/339 (3%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I K I+  L++ GF + + IQ  A P    G D I QS++GTGK+  F +  L+ +++  
Sbjct: 9   ISKEIQMALEQLGFEEATIIQELAIPIATEGKDLIGQSQTGTGKTFAFGIPILDNILQNN 68

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQIVVGS 144
             Q Q +++ PTRE+AVQ+++    + A  K  ++  + G     Q++  K+ VQIV+G+
Sbjct: 69  NHQIQALVICPTRELAVQVSNEFDKLTAFTKIRNIAVYGGEYIDKQIKGLKKKVQIVIGT 128

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGRI   I+ K + +D VR  ++DEAD++++ GF+EDI  I  +    +Q ++ SAT   
Sbjct: 129 PGRILDHIERKTIKLDHVRFVVLDEADEMLDMGFIEDIENILRETSEERQTMLFSATMPA 188

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
           + L+  +KY+ +P +IR ++ T   + V Q+  +  + KN      D+ + L ++L    
Sbjct: 189 EILSLSKKYLKNPEMIRVKNKT---MTVDQIEQIYMKVKN-----ADKSEVLSRILQLES 240

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             + +IF N +   + +  ++ N  +  E L G   Q+ R   L+ F+ G++ +L+ TD+
Sbjct: 241 SKKAIIFCNTKKMVDELVVDMQNRGYAVEALHGDLKQQKRDMVLNRFREGQISMLIATDV 300

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
           AARG+D  +VDLVIN ++P +   Y+HR+GR GR G  G
Sbjct: 301 AARGLDIRDVDLVINYDLPIEEEQYVHRIGRTGRAGASG 339


>gi|262376303|ref|ZP_06069533.1| ATP-dependent RNA helicase rhlB [Acinetobacter lwoffii SH145]
 gi|262308904|gb|EEY90037.1| ATP-dependent RNA helicase rhlB [Acinetobacter lwoffii SH145]
          Length = 383

 Score =  197 bits (501), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 111/354 (31%), Positives = 196/354 (55%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF   +PIQ     + L G+DAI ++++GTGK+  F+++ +N L+  P+Q+ 
Sbjct: 14  LKKAIDALGFTTMTPIQQKVLKFTLAGHDAIGRAQTGTGKTAAFLISIMNDLLNNPIQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR-----PVQI 140
                P+ +ILAPTRE+A+QI    + + A    L+V   +GG   ++ K      PV I
Sbjct: 74  RYRGEPRALILAPTRELALQIESDAQDL-AKYAGLNVVTLLGGVDFDKQKNQLNKAPVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  +S     +Q L+ 
Sbjct: 133 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   Q+++ +P+ +  E   +    V+Q V ++ +         D+ K L +
Sbjct: 193 SATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVAK--------ADKYKLLQE 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L   P  + +IF+N + +   + ++L    +    LSG   Q  RL  LD FK GK  I
Sbjct: 245 ILRDEPIEKVMIFANRRDQVRKLYDHLKRDGYKVVMLSGEIAQDKRLKMLDQFKNGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR GT G+ I+ ++ +
Sbjct: 305 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTSGVSISFLAED 358


>gi|162458395|ref|NP_001105396.1| translational initiation factor eIF-4A [Zea mays]
 gi|2341061|gb|AAB67607.1| translational initiation factor eIF-4A [Zea mays]
          Length = 414

 Score =  197 bits (501), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 126/399 (31%), Positives = 213/399 (53%), Gaps = 33/399 (8%)

Query: 3   HDIQKCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
            ++     T++  ++ D +FE  +D+ +++ + +G+   GF K S IQ         G D
Sbjct: 21  QELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 80

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 81  VIQQAQSGTGKTATFCSGILQQL-DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GV 138

Query: 121 HVDYFIGGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R     V +VVG+PGR+  M++ + L  D++++F++DEAD++++ 
Sbjct: 139 KVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSR 198

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 199 GFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF- 257

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ +K+      L  L       Q VIF N + + + + + + + + 
Sbjct: 258 ------------YVNVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 305

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 306 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 365

Query: 351 HRMGRAGRYGTRGLVITIVSAES------LVKFHSLMGE 383
           HR+GR+GR+G +G+ I  V+ ++      + KF++++ E
Sbjct: 366 HRIGRSGRFGRKGVAINFVTRDNERMLFDIQKFYNVLIE 404


>gi|412985431|emb|CCO18877.1| ATP-dependent RNA helicase DDX39 [Bathycoccus prasinos]
          Length = 429

 Score =  197 bits (501), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 128/375 (34%), Positives = 200/375 (53%), Gaps = 23/375 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+  L +L 
Sbjct: 52  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVITVLQQLD 111

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
             P  +   +I+  TRE+A QI+  +    AH+ N+      GG  ++  +  ++     
Sbjct: 112 PSP-GEVGAVIICHTRELAYQISHEMTRFSAHMPNVKCAVIYGGVNIKTQREELKANMPN 170

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           ++V +PGR+K + +   +++     FI+DE DK +       D+  I+   P  KQ+++ 
Sbjct: 171 VIVATPGRLKVLAQEGTISLKKCAHFILDECDKCLEKLDMRADVQEIFKLTPHDKQVMMF 230

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLG--VKQLVALIPECKNPSLRYVDEEKKL 256
           +AT S +     +K+M DP+ I  +D T+  L   V+  V L  + KN         +KL
Sbjct: 231 TATLSKELRPVCKKFMNDPMEIFVDDETKLTLHGLVQHYVKLEEQEKN---------RKL 281

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF +   R   + + +   NF +  +S A  Q+ RL    SFK G  
Sbjct: 282 TDLLDALQFNQVVIFVSSVARCTALDKLMQECNFPSIAISRAMSQEERLLRYQSFKDGNK 341

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS----AE 372
           RILV TDL ARGID   V++VIN ++P DA TYLHR+GRAGR+GT+GL I+ VS    ++
Sbjct: 342 RILVATDLVARGIDIERVNIVINYDMPGDADTYLHRVGRAGRFGTKGLAISFVSSSEDSD 401

Query: 373 SLVKFHSLMGEINLD 387
            L K H    E+++D
Sbjct: 402 VLSKVHERF-EVSID 415


>gi|115459616|ref|NP_001053408.1| Os04g0533000 [Oryza sativa Japonica Group]
 gi|75327302|sp|Q7XMK8.1|RH6_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 6
 gi|32489827|emb|CAE04571.1| OSJNBb0039L24.10 [Oryza sativa Japonica Group]
 gi|113564979|dbj|BAF15322.1| Os04g0533000 [Oryza sativa Japonica Group]
 gi|125591093|gb|EAZ31443.1| hypothetical protein OsJ_15580 [Oryza sativa Japonica Group]
 gi|215701173|dbj|BAG92597.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 498

 Score =  197 bits (501), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 198/382 (51%), Gaps = 22/382 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 114 RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 172

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G H+K + V    GGT
Sbjct: 173 GKTAAFCIPALEK-IDQDKNAIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGT 230

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R  +PV ++VG+PGRI  + K     + +  + +MDEADKL++  F   I  +
Sbjct: 231 SLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQEL 290

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+  P +I   D    L G+ Q  A        
Sbjct: 291 IRYLPSNRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELT-LKGITQFYA-------- 341

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 342 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 398

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 399 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHL 458

Query: 363 GLVITIVSAESLVKFHSLMGEI 384
           GL + +++ E     + +  E+
Sbjct: 459 GLAVNLITYEDRFNLYRIEQEL 480


>gi|62858405|ref|NP_001016000.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A [Xenopus (Silurana)
           tropicalis]
 gi|89271292|emb|CAJ82673.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Xenopus (Silurana)
           tropicalis]
 gi|89271293|emb|CAJ82681.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Xenopus (Silurana)
           tropicalis]
 gi|89271296|emb|CAJ82702.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Xenopus (Silurana)
           tropicalis]
 gi|187469409|gb|AAI67122.1| hypothetical protein LOC548754 [Xenopus (Silurana) tropicalis]
 gi|213624204|gb|AAI70784.1| hypothetical protein LOC548754 [Xenopus (Silurana) tropicalis]
 gi|213627133|gb|AAI70782.1| hypothetical protein LOC548754 [Xenopus (Silurana) tropicalis]
          Length = 427

 Score =  197 bits (501), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 203/382 (53%), Gaps = 19/382 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +  
Sbjct: 48  DFLLKPELLRSIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQTE 107

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
            +   Q   +++  TRE+A QI+        ++  + V  F GG  +++ +  ++     
Sbjct: 108 AVE-GQVTVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEDTIRKSCPH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +++ K LN+ +V+ F++DE DK++       D+  I+   P  KQ ++ 
Sbjct: 167 IVVGTPGRILALVRSKILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ +  +D T+  L G++Q            L+  ++ +KL 
Sbjct: 227 SATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYV--------KLKDSEKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + R
Sbjct: 279 DLLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIAIHRNMSQEERLSRYQQFKDFQRR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           ILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E   K 
Sbjct: 339 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAK- 397

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ ++      NVG +PD +
Sbjct: 398 --ILNDVQDRFEVNVGELPDEI 417


>gi|323701905|ref|ZP_08113575.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533209|gb|EGB23078.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum nigrificans
           DSM 574]
          Length = 532

 Score =  197 bits (501), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 116/353 (32%), Positives = 190/353 (53%), Gaps = 14/353 (3%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           F  ++ ++  I QGL + GF + +PIQ  A P VL G+D I Q+++GTGK+  F +  + 
Sbjct: 9   FFGNLELDSCIVQGLVDMGFEEPTPIQQLAVPLVLAGHDIIGQAQTGTGKTAAFGIPLVA 68

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP---- 137
           +L     +  Q II+ PTRE+A+Q+ + +  +G + +   V    GG  +ER  R     
Sbjct: 69  RL-NFRKRGVQAIIITPTRELAIQVGEEINKIGRY-RRARVLPIYGGQSIERQIRSLRQG 126

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V +VVG+PGR+   ++ + L +D V + ++DEAD++++ GF++DI  I    PP +Q L+
Sbjct: 127 VHVVVGTPGRLLDHLRRQTLKLDQVSMVVLDEADEMLDMGFIDDIEEILRHTPPERQTLL 186

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
            SAT   +     ++YM DP  +    A      ++Q+    PE          + + L 
Sbjct: 187 FSATMPEEISRLARQYMTDPKFVTVSKANITAPSIEQIYYEAPE--------KHKLEALC 238

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           ++L  T   Q ++F   +   + +   L    + A  L G   Q+ R   +  F+ G+V 
Sbjct: 239 RILDTTEITQGIVFCRTKRGVDELVAGLQARGYTAVSLHGDLSQQQRNTVMRQFRSGEVE 298

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +LV TD+AARG+D   V  VIN +IP D   Y+HR+GR GR G  G+ ITI++
Sbjct: 299 LLVATDVAARGLDIEGVSHVINYDIPQDPEFYVHRIGRTGRAGRSGVAITIIT 351


>gi|224031067|gb|ACN34609.1| unknown [Zea mays]
 gi|413934787|gb|AFW69338.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
           mays]
          Length = 414

 Score =  197 bits (501), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 204/382 (53%), Gaps = 27/382 (7%)

Query: 3   HDIQKCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
            ++     T++  ++ D +FE  +D+ +++ + +G+   GF K S IQ         G D
Sbjct: 21  QELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 80

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 81  VIQQAQSGTGKTATFCSGILQQL-DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GV 138

Query: 121 HVDYFIGGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R     V +VVG+PGR+  M++ + L  D++++F++DEAD++++ 
Sbjct: 139 KVHACVGGTSVREDQRILGSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSR 198

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 199 GFKDQIYDIFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF- 257

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ +K+      L  L       Q VIF N + + + + + + + + 
Sbjct: 258 ------------YVNVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 305

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 306 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 365

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 366 HRIGRSGRFGRKGVAINFVTRD 387


>gi|162462542|ref|NP_001104874.1| translation initiation factor [Zea mays]
 gi|2286151|gb|AAB64289.1| translation initiation factor [Zea mays]
          Length = 414

 Score =  197 bits (501), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 204/382 (53%), Gaps = 27/382 (7%)

Query: 3   HDIQKCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
            ++     T++  ++ D +FE  +D+ +++ + +G+   GF K S IQ         G D
Sbjct: 21  QELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYRYGFEKPSAIQQRGIVPFCKGLD 80

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 81  VIQQAQSGTGKTATFCSGILQQL-DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GV 138

Query: 121 HVDYFIGGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R     V +VVG+PGR+  M++ + L  D++++F++DEAD++++ 
Sbjct: 139 KVHACVGGTSVREDQRILGSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSR 198

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 199 GFKDQIYDIFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF- 257

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ +K+      L  L       Q VIF N + + + + + + + + 
Sbjct: 258 ------------YVNVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 305

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 306 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 365

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 366 HRIGRSGRFGRKGVAINFVTRD 387


>gi|312129451|ref|YP_003996791.1| dead/deah box helicase domain-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311905997|gb|ADQ16438.1| DEAD/DEAH box helicase domain protein [Leadbetterella byssophila
           DSM 17132]
          Length = 619

 Score =  197 bits (501), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 188/343 (54%), Gaps = 16/343 (4%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I + ++E GF + +PIQ AA P V++G D I Q+++GTGK+  F + A+   +    +  
Sbjct: 79  IVKAVEEMGFTESTPIQTAAIPVVMSGRDVIGQAQTGTGKTAAFGIPAIEH-VNAEDRNT 137

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQIVVGSPGR 147
           Q +IL PTRE+A+Q+ + +  +  + K L V    GG   ER     KR  QIVVG+PGR
Sbjct: 138 QVLILCPTRELALQVKEQLTLLAKYKKGLLVSAIYGGESYERQFANLKRGTQIVVGTPGR 197

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           I   I+ K L +D++ + I+DEAD+++N GF EDI  I S     +Q ++ SAT S + L
Sbjct: 198 IMDHIEKKTLKLDNISMVILDEADEMLNMGFREDIEQILSFAKEDRQTVLFSATMSKEIL 257

Query: 208 ATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQ 267
              +K+  DP +++          ++Q   L+ +     L        +V+L+       
Sbjct: 258 NITKKFQNDPEIVKVTRKEITNTNIEQSYYLVKKEAKFEL--------MVRLIDVHDLQL 309

Query: 268 CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAAR 327
            ++F N + + + I E L    + AE L G   Q AR   ++ F+ G  +ILV TD+AAR
Sbjct: 310 MLVFCNTKSKVDEIVEELQANGYAAEGLHGDMRQAARNQVMNKFRNGNTKILVATDVAAR 369

Query: 328 GIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG---LVIT 367
           GID + VD VIN ++P D   Y+HR+GR GR G  G   L IT
Sbjct: 370 GIDVSGVDAVINYDLPMDLEYYVHRIGRTGRAGKLGKAFLFIT 412


>gi|157963311|ref|YP_001503345.1| DEAD/DEAH box helicase [Shewanella pealeana ATCC 700345]
 gi|157848311|gb|ABV88810.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
           700345]
          Length = 511

 Score =  197 bits (500), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 205/379 (54%), Gaps = 28/379 (7%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL---IKLPV 88
           I + +   G+   SPIQ  A P VL G D +  +++GTGK+  F +  L  L    K P 
Sbjct: 12  ILKAVANKGYDTPSPIQAQAIPAVLEGKDVMAAAQTGTGKTAGFTLPLLELLSKGTKAPA 71

Query: 89  QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQIVVGSP 145
           +Q + ++L PTRE+A Q+ + V + G ++       F G   G Q+ +  R V I+V +P
Sbjct: 72  KQVRALVLTPTRELAAQVGESVETYGKNLPLKSAVVFGGVGIGPQITKLNRGVDILVATP 131

Query: 146 GRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHD 205
           GR+  +   + L+   + + ++DEAD++++ GF+ DI  I + LP  +Q L+ SAT+S D
Sbjct: 132 GRLLDLYNQRALSFSQLEVLVLDEADRMLDMGFIHDIKKILAILPAKRQNLMFSATFS-D 190

Query: 206 NLATLQKYMVD---PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQL 259
           ++  L K +V+    + + P +AT     V+Q V     C       VD+ +K   LV+L
Sbjct: 191 DIRQLAKGLVNNPVEISVTPRNATANT--VQQWV-----CP------VDQSQKTAVLVKL 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           + Q  + Q ++FS  +     + +NL   +  A  + G + Q AR  +L  FK G VR+L
Sbjct: 238 IKQNDWQQVLVFSRTKHGANRLAKNLEAKDITAAAIHGNKSQGARTKALADFKSGAVRVL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE--SLVKF 377
           V TD+AARG+D   +  V+N ++P+    Y+HR+GR GR G  G  +++VS E   L++ 
Sbjct: 298 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGHAVSLVSNEETKLLRD 357

Query: 378 HSLMGEINLDHAFNVGLVP 396
             L+ + NL+     GL P
Sbjct: 358 IELLIKQNLERRVVEGLEP 376


>gi|388257453|ref|ZP_10134632.1| putative ATP-dependent RNA helicase DeaD [Cellvibrio sp. BR]
 gi|387938620|gb|EIK45172.1| putative ATP-dependent RNA helicase DeaD [Cellvibrio sp. BR]
          Length = 609

 Score =  197 bits (500), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 193/355 (54%), Gaps = 14/355 (3%)

Query: 20  VLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAA 79
           ++F  D+ + +P+ + +Q+ G+ + SPIQ AA P +L G D +  +++GTGK+  F +  
Sbjct: 5   IMFA-DLALSEPVMRAIQKVGYEQPSPIQAAAIPVLLAGGDILGMAQTGTGKTAAFALPL 63

Query: 80  LNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPK 135
           L++ I     +PQ ++LAPTRE+A+Q+ +  +   + +   HV    GG    TQ+   K
Sbjct: 64  LSR-IDTKQAEPQILVLAPTRELAIQVAEAFQKYASEIPGFHVLPIYGGQEMTTQLRSLK 122

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQM 195
           R   +VVG+PGR+   ++   LN+++++  ++DEAD+++  GF++D+ WI    P  +Q 
Sbjct: 123 RGAHVVVGTPGRVMDHLRRGSLNLNNLKALVLDEADEMLRMGFIDDVEWILEHTPKTRQT 182

Query: 196 LVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
            + SAT   +       Y+ +   I+   +      ++Q+  ++           ++   
Sbjct: 183 ALFSATMPKEIRHVCNNYLNNATEIKIASSQSTDANIEQVYWMVSGT--------NKLDA 234

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L ++L   PF+  +IF   +     + E L    + A  L+G  +Q+ R  +++  K  K
Sbjct: 235 LTRILEVEPFDGMIIFVRTKTATVELAEKLEARGYSAAALNGDMNQQLRERTIERLKTNK 294

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           + I++ TD+AARGID   V  V+N +IP+D+  Y+HR+GR GR G  G  I  V+
Sbjct: 295 LDIVIATDVAARGIDVERVSHVVNYDIPYDSEAYVHRIGRTGRAGRSGKAILFVA 349


>gi|418019955|ref|ZP_12659337.1| Superfamily II DNA and RNA helicase [Candidatus Regiella
           insecticola R5.15]
 gi|347604690|gb|EGY29274.1| Superfamily II DNA and RNA helicase [Candidatus Regiella
           insecticola R5.15]
          Length = 628

 Score =  197 bits (500), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 192/351 (54%), Gaps = 23/351 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +  PI   L + G+ K SPIQ+   P++LNG D +  +++G+GK+  F +  L+  IK  
Sbjct: 14  LSAPILSALTDLGYKKPSPIQLECIPHLLNGCDVLGMAQTGSGKTAAFGLPLLHN-IKAE 72

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVG 143
           ++ PQ ++LAPTRE+AVQ+ + +     H+K ++V    GG + +   R +    Q+VVG
Sbjct: 73  IKSPQILVLAPTRELAVQVAEALTDFSKHIKGVNVVALYGGQRYDLQLRALRQGPQVVVG 132

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   +K   LN+  +   ++DEAD+++  GF+ED+  I  Q+P + Q  + SAT  
Sbjct: 133 TPGRLLDHLKRGTLNLSKLSGLVLDEADEMLRMGFIEDVENIMKQIPAVHQTALFSATMP 192

Query: 204 HDNLATLQKYMVDPLLIRPEDA--TRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQ 258
                  +++M +P  IR + +  TRP   + Q           S   VD  +K   LV+
Sbjct: 193 EAIRRITRRFMKEPQEIRIQSSVTTRP--DISQ-----------SCWMVDGMRKNEALVR 239

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
            L    F+  +IF   +     + E L    + +  L+G  +Q  R ++L+  K G++ I
Sbjct: 240 FLESEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALRESTLERLKDGRLNI 299

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           L+ TD+AARG+D   + LV+N +IP D+ +Y+HR+GR GR G  G  +  V
Sbjct: 300 LIATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFV 350


>gi|417879361|ref|ZP_12523933.1| ATP-dependent RNA helicase RhlB, partial [Acinetobacter baumannii
           ABNIH3]
 gi|342228819|gb|EGT93696.1| ATP-dependent RNA helicase RhlB [Acinetobacter baumannii ABNIH3]
          Length = 373

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 111/354 (31%), Positives = 200/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  PVQ+ 
Sbjct: 14  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPVQEQ 73

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    +S+     NLH+   +GG   ++ K+      V I
Sbjct: 74  RFRGEPRALILAPTRELALQIESDAKSL-TKFSNLHLVTLLGGVDFDKQKKQLDANFVDI 132

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 133 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMF 192

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ + L  
Sbjct: 193 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAK--------QDKYRLLQD 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  L+ FK+GK  I
Sbjct: 245 ILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQGKHNI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR G +G+ I+ +S +
Sbjct: 305 MIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSED 358


>gi|114046344|ref|YP_736894.1| DEAD/DEAH box helicase domain-containing protein [Shewanella sp.
           MR-7]
 gi|113887786|gb|ABI41837.1| DEAD/DEAH box helicase domain protein [Shewanella sp. MR-7]
          Length = 549

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 197/363 (54%), Gaps = 18/363 (4%)

Query: 31  PIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK---LP 87
           PI++ + E G+   SPIQ  A P VL G D +  +++GTGK+  F +  L  L K     
Sbjct: 11  PIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAK 70

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
             Q + ++L PTRE+A Q+++ V + G ++  L      GG     Q+++ +  V ++V 
Sbjct: 71  AGQIRALVLTPTRELAAQVSESVETYGKYLP-LRSAVVFGGVPINPQIQKLRHGVDVLVA 129

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  +++   +  + + + ++DEAD++++ GF+ DI  I + LP  +Q L+ SAT+S
Sbjct: 130 TPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFS 189

Query: 204 HDNLATLQKYMVD-PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQ 262
            D +  L K +V+ P+ I           VKQ +  + + +  +L        L+QL+ Q
Sbjct: 190 -DEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSAL--------LIQLIKQ 240

Query: 263 TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTT 322
             + Q ++FS  +     + ++L  A   A  + G + Q AR  +L  FK G+VR+LV T
Sbjct: 241 EDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT 300

Query: 323 DLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMG 382
           D+AARG+D   +  V+N ++P+    Y+HR+GR GR G  G  +++VS+E       +  
Sbjct: 301 DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVSLVSSEEFKLLRDIER 360

Query: 383 EIN 385
            IN
Sbjct: 361 LIN 363


>gi|433458404|ref|ZP_20416331.1| DNA/RNA helicase [Arthrobacter crystallopoietes BAB-32]
 gi|432193378|gb|ELK50115.1| DNA/RNA helicase [Arthrobacter crystallopoietes BAB-32]
          Length = 559

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 120/376 (31%), Positives = 204/376 (54%), Gaps = 19/376 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  +   I + L + G     PIQ    P  L+G+D I Q+K+GTGK++ F + AL ++I
Sbjct: 45  DFDVRADIVRSLFDAGITHPFPIQAMTLPVALSGHDIIGQAKTGTGKTLGFGIPALQRVI 104

Query: 85  --------KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQV 131
                   KLP    PQ +++ PTRE+AVQ+   +++   H +++ V    GG     Q+
Sbjct: 105 GPSDEGFDKLPAPGAPQALVVVPTRELAVQVAQDLKTASKH-RDVRVSTIYGGRAYEPQI 163

Query: 132 ERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           E   + V++VVG+PGR+  + + ++LN+ +VR+ ++DEAD++++ GF+ D+  +    P 
Sbjct: 164 EELGKGVEVVVGTPGRLIDLHRQRHLNLKNVRIVVLDEADEMLDLGFLPDVETLLGATPA 223

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
           ++Q ++ SAT     +A  ++YM  P  IR  D     +  K +  +I          +D
Sbjct: 224 VRQTMLFSATMPGPVVAMARRYMTQPTHIRAADPDDEGMTKKDIRQVIYRA-----HALD 278

Query: 252 EEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
           +++ + ++L      + +IF+  +     + E L +  F A  + G   Q AR  +L +F
Sbjct: 279 KDEVVARILQAEGRGRTIIFTKTKRTAAKLSEELVDRGFAAAAIHGDLGQGAREQALRAF 338

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           +  KV +LV TD+AARGID  +V  VIN + P D  TYLHR+GR GR G +G  IT V  
Sbjct: 339 RNEKVDVLVATDVAARGIDVDDVTHVINFQCPEDEKTYLHRVGRTGRAGNKGTAITFVDW 398

Query: 372 ESLVKFHSLMGEINLD 387
           + + ++  +   + LD
Sbjct: 399 DDVPRWGLINKALGLD 414


>gi|424742777|ref|ZP_18171098.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-141]
 gi|422944007|gb|EKU39017.1| DEAD/DEAH box helicase [Acinetobacter baumannii WC-141]
          Length = 389

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 110/354 (31%), Positives = 200/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  P+Q+ 
Sbjct: 20  LKKAIDALGFKQMTPIQQKVLKYTLGGHDAIGRAQTGTGKTAAFLISVINDLLHNPIQEQ 79

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    + +     +LHV   +GG   ++ K+      V I
Sbjct: 80  RFRGEPRALILAPTRELALQIESDAKLL-TKFTDLHVVTLLGGVDFDKQKKQLDANFVDI 138

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 139 IVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMF 198

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ + L  
Sbjct: 199 SATFSYDVLNLARQWLFEPITVEIEPEQKTNNDVEQRVYVVAK--------QDKYRLLQD 250

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  LD FK+GK  I
Sbjct: 251 ILREEPIDKVMIFANRRDQVRRLYDHLKRDGYRVGMLSGEIAQDKRLKMLDQFKQGKNNI 310

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  V+N  +P  +  Y+HR+GR GR G++G+ I+ +S +
Sbjct: 311 MIATDVAGRGIHVDGVSHVVNYTLPEQSDDYVHRIGRTGRAGSQGVSISFLSED 364


>gi|319956997|ref|YP_004168260.1| dead/deah box helicase domain-containing protein [Nitratifractor
           salsuginis DSM 16511]
 gi|319419401|gb|ADV46511.1| DEAD/DEAH box helicase domain protein [Nitratifractor salsuginis
           DSM 16511]
          Length = 462

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 120/372 (32%), Positives = 205/372 (55%), Gaps = 24/372 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D  +   + +G++  GF + SPIQ  A P +L G D + Q+ +GTGK+  F +  L+++ 
Sbjct: 5   DFDLHPEVAKGVRIAGFKEPSPIQKEAIPIILEGRDLVGQAHTGTGKTAAFGLPILDRIA 64

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVG--AHVKNLHVDYFIG-GTQVERPKRPVQIV 141
           +  +++   +++ PTRE+A Q++D +  +G  A ++ L V   +G G Q+    R VQIV
Sbjct: 65  RGEIER--ALVITPTRELATQVSDELYHLGRFAGIRTLAVYGGVGYGRQIALIHRGVQIV 122

Query: 142 VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSAT 201
           V +PGR+K + +   +++ +  + ++DEAD++++ GF++D+  I+  +P  +Q L+ SAT
Sbjct: 123 VATPGRLKDLYQKGKIDVFNPEVVVLDEADEMLDMGFLDDVREIFEYIPQNRQTLLFSAT 182

Query: 202 YSHDNLATLQKYMVDPLLIRPE------DATRPLLGVKQLVALIPECKNPSLRYVDEEKK 255
                +    K + D LL  PE      + T   + ++Q   +I E +         ++ 
Sbjct: 183 -----MPDPIKELADTLLYEPEFISVVGEETTKNVDIEQYYYVINENQ--------RDEA 229

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           +V+LL    +++ +IF   +   + + E L    F A  L G  DQ  R A + SF+RG+
Sbjct: 230 IVRLLETENYDKALIFCRMKREVDRLAEELKALGFNAAGLHGDIDQMERDAIVKSFRRGE 289

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
            RIL+ TD+AARG+D  NV  V N  IP D  +Y+HR+GR GR G RG  IT+ S E   
Sbjct: 290 TRILIATDVAARGLDIKNVTHVFNYHIPFDPQSYVHRIGRTGRAGKRGRAITLASTEEFR 349

Query: 376 KFHSLMGEINLD 387
           +   +  E+  D
Sbjct: 350 ELQRIRKEVGAD 361


>gi|226312984|ref|YP_002772878.1| ATP-dependent RNA helicase [Brevibacillus brevis NBRC 100599]
 gi|226095932|dbj|BAH44374.1| probable ATP-dependent RNA helicase [Brevibacillus brevis NBRC
           100599]
          Length = 529

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 117/354 (33%), Positives = 193/354 (54%), Gaps = 21/354 (5%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D  + K I Q + + GF + SPIQ A  P VL+G D I Q+++GTGK+  F +  + K+
Sbjct: 5   SDFPLHKSILQAIHDMGFEEPSPIQAACIPKVLDGGDLIGQAQTGTGKTAAFGIPLVEKI 64

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQI 140
              P  + Q I+L PTRE+A+Q+   +  +  + K   +  + G   G Q+   ++ VQI
Sbjct: 65  T--PANRVQAIVLTPTRELAIQVAGELLRISKYNKVRTLPIYGGQSIGHQIRALRQGVQI 122

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++ K L +D V   ++DEAD++++ GF+EDI  I + +P  +Q L+ SA
Sbjct: 123 VVGTPGRVMDHLRRKTLKLDHVHTLVLDEADEMLDMGFIEDIETIINHMPDERQTLLFSA 182

Query: 201 TYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK--KL 256
           T   +      +YM  P  + +  E+ T PL+            +    +  D  K   L
Sbjct: 183 TMPPEIKRLATRYMKQPQTIAVSREEVTAPLI------------EQVYYKVFDRNKVESL 230

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            ++L        +IF   +   + + E L +  + A+ L G   Q  R   +++F+ G +
Sbjct: 231 CRILDSEDVELGIIFCRTKRGVDELSEVLQSRGYLADGLHGDLSQAQRDKVMNAFREGSI 290

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
             L+ TD+AARGID  NV  VIN +IP D+ +Y+HR+GR GR G +G+ +T+V+
Sbjct: 291 EFLIATDVAARGIDVGNVSHVINYDIPQDSESYVHRIGRTGRAGRKGIAMTLVT 344


>gi|357146923|ref|XP_003574159.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 12-like
           [Brachypodium distachyon]
          Length = 523

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 193/370 (52%), Gaps = 22/370 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 139 RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 197

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G ++ N+ V    GGT
Sbjct: 198 GKTAAFCIPALEK-IDPEKNAIQVVILVPTRELALQTSQVCKELGKYL-NIEVMVSTGGT 255

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R  +PV ++ G+PGRI  + +     ++   + IMDEADKL+   F   +  +
Sbjct: 256 SLKDDIMRLYQPVHLLAGTPGRILDLTRKGICMLNECSMLIMDEADKLLAPEFQPSVEQL 315

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            S LP  +Q+L+ SAT+        QKY+  P +I   D    L G+ Q  A        
Sbjct: 316 ISFLPASRQLLLFSATFPVTVKDFKQKYLPRPYVINLMDELT-LKGITQYYA-------- 366

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 367 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 423

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 424 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHL 483

Query: 363 GLVITIVSAE 372
           GL + +++ E
Sbjct: 484 GLAVNLITYE 493


>gi|293609547|ref|ZP_06691849.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|375135371|ref|YP_004996021.1| ATP-dependent RNA helicase RhlB [Acinetobacter calcoaceticus
           PHEA-2]
 gi|292827999|gb|EFF86362.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122816|gb|ADY82339.1| ATP-dependent RNA helicase RhlB [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 389

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 110/354 (31%), Positives = 200/354 (56%), Gaps = 22/354 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ- 90
           +++ +   GF + +PIQ     Y L G+DAI ++++GTGK+  F+++ +N L+  P+Q+ 
Sbjct: 20  LKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLISVINDLLNNPIQEQ 79

Query: 91  -----PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP-----VQI 140
                P+ +ILAPTRE+A+QI    + +     NLH+   +GG   ++ K+      V I
Sbjct: 80  RFRGEPRALILAPTRELALQIESDAKFL-TKFSNLHLVTLLGGVDFDKQKKQLDANFVDI 138

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI--YSQLPPMKQMLVV 198
           +V +PGR+   ++ K + +D +   ++DEAD+L++ GF+  +  I  YS     +Q L+ 
Sbjct: 139 MVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRYSPRKEQRQTLMF 198

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           SAT+S+D L   ++++ +P+ +  E   +    V+Q V ++ +         D+ + L  
Sbjct: 199 SATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAK--------QDKYRLLQD 250

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L + P ++ +IF+N + +   + ++L    +    LSG   Q  RL  L+ FK+GK  I
Sbjct: 251 ILREEPIDKVMIFANRRDQVRRLYDHLKKDGYRVGMLSGEIAQDKRLKMLEQFKQGKHNI 310

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           ++ TD+A RGI    V  VIN  +P  +  Y+HR+GR GR G++G+ I+ +S +
Sbjct: 311 MIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGSQGVSISFLSED 364


>gi|333923641|ref|YP_004497221.1| DEAD/DEAH box helicase [Desulfotomaculum carboxydivorans CO-1-SRB]
 gi|333749202|gb|AEF94309.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum
           carboxydivorans CO-1-SRB]
          Length = 532

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 116/353 (32%), Positives = 190/353 (53%), Gaps = 14/353 (3%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           F  ++ ++  I QGL + GF + +PIQ  A P VL G+D I Q+++GTGK+  F +  + 
Sbjct: 9   FFGNLELDSCIVQGLVDMGFEEPTPIQQLAVPLVLAGHDIIGQAQTGTGKTAAFGIPLVA 68

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP---- 137
           +L     +  Q II+ PTRE+A+Q+ + +  +G + +   V    GG  +ER  R     
Sbjct: 69  RL-NFRKRGVQAIIITPTRELAIQVGEEINKIGRY-RRARVLPIYGGQSIERQIRSLRQG 126

Query: 138 VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLV 197
           V +VVG+PGR+   ++ + L +D V + ++DEAD++++ GF++DI  I    PP +Q L+
Sbjct: 127 VHVVVGTPGRLLDHLRRQTLKLDQVSMVVLDEADEMLDMGFIDDIEEILRHTPPERQTLL 186

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
            SAT   +     ++YM DP  +    A      ++Q+    PE          + + L 
Sbjct: 187 FSATMPEEISRLARQYMTDPKFVTVSKANITAPSIEQIYYEAPE--------KHKLEALC 238

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           ++L  T   Q ++F   +   + +   L    + A  L G   Q+ R   +  F+ G+V 
Sbjct: 239 RILDTTEITQGIVFCRTKRGVDELVAGLQARGYTAVSLHGDLSQQQRNTVMRQFRSGEVE 298

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +LV TD+AARG+D   V  VIN +IP D   Y+HR+GR GR G  G+ ITI++
Sbjct: 299 LLVATDVAARGLDIEGVSHVINYDIPQDPEFYVHRIGRTGRAGRSGVAITIIT 351


>gi|170085389|ref|XP_001873918.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651470|gb|EDR15710.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 434

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 207/386 (53%), Gaps = 25/386 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 55  DFLLKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQL- 113

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV--------ERPK 135
             PV  +   ++L  TRE+A QI +       ++ ++ V  F GGT V        ++ K
Sbjct: 114 -EPVNGEVSVLVLCHTRELAFQIKNEYTRFAKYMPDVRVSTFYGGTPVTKDAEILRDKTK 172

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI-NTGFVEDITWIYSQLPPMKQ 194
            P  IVV +PGR+  + + K L+  +V+ F++DE DK++       D+  I+   P  KQ
Sbjct: 173 CP-HIVVATPGRLNALARDKVLDAKNVKHFVLDECDKMLEQLDMRRDVQEIFRTTPHHKQ 231

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLL-GVKQLVALIPECKNPSLRYVDEE 253
           +++ SAT + D   T +K+M +PL I  +D T+  L G++Q            L  V + 
Sbjct: 232 VMMFSATLAKDIRITCKKFMANPLEIFVDDETKLTLHGLQQ--------HYVKLEEVSKN 283

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
           KKL +LL    FNQ VIF     R   + + L + NF +  +     Q+ R+    +FK 
Sbjct: 284 KKLSELLDTLEFNQVVIFVKSVARAIELDKLLVSCNFPSISIHSGLQQEERIKRYTAFKA 343

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
            + RILV TD+  RGID   V++VIN + P DA +YLHR+GRAGR+GT+GL IT VS++S
Sbjct: 344 FEKRILVATDIFGRGIDVERVNIVINYDCPPDADSYLHRVGRAGRFGTKGLAITFVSSDS 403

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNL 399
                 +MG I       V  +PD++
Sbjct: 404 ---DQHVMGAIQSRFEVAVPELPDHI 426


>gi|284006674|emb|CBA71936.1| cold-shock DEAD box protein A (ATP-dependent RNA helicase)
           [Arsenophonus nasoniae]
          Length = 615

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 194/351 (55%), Gaps = 17/351 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  PI   L + G+ K SPIQ    PY+L+G D +  +++G+GK+  F +  L+  I
Sbjct: 16  DLGLSTPILSALNDLGYEKPSPIQQQCIPYLLDGCDVLGMAQTGSGKTAAFSLPLLHN-I 74

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQI 140
            + ++ PQ ++LAPTRE+AVQ+ + +     H+++++V    GG    +Q+   ++  QI
Sbjct: 75  DITLKAPQILVLAPTRELAVQVAEAMGEFSKHMRSVNVVALYGGQRYDSQLRALRQGPQI 134

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   +K   LN+  +R  ++DEAD+++  GF+ED+  I SQ+P   Q  + SA
Sbjct: 135 VVGTPGRLLDHLKRGTLNLSHLRGLVLDEADEMLRMGFIEDVENIMSQIPSEHQTALFSA 194

Query: 201 TYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQ 258
           T         +++M  P  + I+    TRP   + Q           S+  + + + LV+
Sbjct: 195 TMPEAIRRITRRFMKSPKEISIQSSVTTRP--DITQ--------SYWSVYGMRKNEALVR 244

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
            L    F+  +IF   +     + E L  + + +  L+G  +Q  R  +L+  K G++ I
Sbjct: 245 FLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSSALNGDMNQALREQTLERLKDGRLDI 304

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           L+ TD+AARG+D   + LV+N +IP DA +Y+HR+GR GR G  G  I  V
Sbjct: 305 LIATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRAILFV 355


>gi|212558739|gb|ACJ31193.1| Helicase:DbpA, RNA-binding:DEAD/DEAH box helicase [Shewanella
           piezotolerans WP3]
          Length = 611

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 193/362 (53%), Gaps = 23/362 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + +P+ + L E G+ K +PIQ A+   ++ G D + Q+++GTGK+  F +  LN  I   
Sbjct: 13  LAEPLLRALDELGYEKPTPIQAASIDPLMAGKDILGQAQTGTGKTGAFALPLLNS-IDPN 71

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
              PQ ++LAPTRE+AVQ+ +   S    +K LHV    GG     Q+   +R  QI+VG
Sbjct: 72  TNSPQILVLAPTRELAVQVAEAFGSYAKFMKGLHVLPIYGGQSMHQQLNALRRGPQIIVG 131

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   ++   L ++S++  ++DEAD+++  GF++DI WI    P  +Q+ + SAT  
Sbjct: 132 TPGRVMDHMRRGTLKLESLKAMVLDEADEMLKMGFIDDIEWILEHTPKQRQLALFSATMP 191

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV-----DEEKKLVQ 258
                   KY+ +P+ ++    T  +  ++Q             R+V     ++ + LV+
Sbjct: 192 EQIKRVANKYLSEPVHVKIAATTTTVETIEQ-------------RFVQVSQHNKLEALVR 238

Query: 259 LLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRI 318
           +L        +IF   +     + E L    + +  L G  +Q+AR  ++D  KRGK+ I
Sbjct: 239 VLEVEKTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVDQLKRGKLDI 298

Query: 319 LVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFH 378
           ++ TD+AARG+D   +  V+N +IP+D   Y+HR+GR GR G  G+ I  V+   +    
Sbjct: 299 IIATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLR 358

Query: 379 SL 380
           ++
Sbjct: 359 TI 360


>gi|254566021|ref|XP_002490121.1| Cytoplasmic DExD/H-box helicase [Komagataella pastoris GS115]
 gi|238029917|emb|CAY67840.1| Cytoplasmic DExD/H-box helicase [Komagataella pastoris GS115]
 gi|328350520|emb|CCA36920.1| ATP-dependent RNA helicase DDX6/DHH1 [Komagataella pastoris CBS
           7435]
          Length = 472

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/356 (35%), Positives = 197/356 (55%), Gaps = 28/356 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GTGK+  FV+ +L K IK  
Sbjct: 35  LKRELLMGIFEAGFEKPSPIQEESIPIALTGRDILARAKNGTGKTASFVIPSLQK-IKPK 93

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ----VERPKRPVQIVVG 143
           + + Q++IL PTRE+A+Q + VV+++G H+  + V    GGT     + R   PV ++VG
Sbjct: 94  MNKIQSLILVPTRELALQTSQVVKTLGKHL-GVQVMVSTGGTLLRDDIIRLNDPVHVLVG 152

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGF---VEDI-TWIYSQLPP---MKQML 196
           +PGRI  +   K    D  + FIMDEADK+++  F   +E I T+  S+LP      Q L
Sbjct: 153 TPGRILDLASRKLAEFDQCKTFIMDEADKMLSREFRNVIEQIITFFPSRLPGGANAYQSL 212

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT+     + + K++  P  I   D    L G+ Q  A           +V+E++KL
Sbjct: 213 LFSATFPLTVKSFMDKHLYKPYEINLMDELT-LKGITQYYA-----------FVEEKQKL 260

Query: 257 V---QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
                L S+   NQ +IF N   R E++ + L + ++   Y      Q +R      F++
Sbjct: 261 HCLNTLFSKLQINQSIIFCNSTKRVELLSKKLTDLDYSCYYSHARMPQASRNKVFHEFRQ 320

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           G VR LV +DL  RGID   V++VIN + P +A TYLHR+GR+GR+G  G+ I ++
Sbjct: 321 GHVRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHFGIAINLI 376


>gi|169831556|ref|YP_001717538.1| DEAD/DEAH box helicase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638400|gb|ACA59906.1| DEAD/DEAH box helicase domain protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 533

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 113/355 (31%), Positives = 195/355 (54%), Gaps = 16/355 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +   I + + + GF + SPIQ+   P +L+G D + Q+++GTGK+  F +  L +L 
Sbjct: 12  DLGVSPEILRAVDDMGFEEPSPIQLQTIPQLLDGRDLVGQAQTGTGKTAAFAIPLLMRL- 70

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIG---GTQVERPKRPVQIV 141
           +     PQ +++ PTRE+A+Q+ +    VG +     +  + G   G Q++  +R V +V
Sbjct: 71  QARRGWPQVLVMTPTRELAIQVAEEFARVGRYTNTRVLPVYGGQSIGRQIKTLQRGVDVV 130

Query: 142 VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSAT 201
           VG+PGR+   +  K L ++ ++  ++DEAD++++ GF++DI  I +  PP +Q L+ SAT
Sbjct: 131 VGTPGRVLDHLNRKTLRLEQLQAVVLDEADEMLDMGFIDDIESILNATPPSRQTLLFSAT 190

Query: 202 YSHDNLATLQKYMVDPL--LIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
                    +KYM  P+   I PE    P   + Q+           LR +D  + L ++
Sbjct: 191 IPGPIARLAEKYMRTPVHVSINPEYVAAP--DIWQVYY--------ELRNIDHLEALCRI 240

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L      + +IF   + R + + E L +  + A+++ G  +Q  R   + +F+ G++ +L
Sbjct: 241 LDAEAVERAIIFCRTKRRVDELAEALRSRGYSADHIHGDLEQNQRNRVMGAFREGEIDLL 300

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+AARGID  N+  VIN + P D  +Y+HR+GR GR G  G  IT+V  + L
Sbjct: 301 VATDVAARGIDVQNISHVINYDCPQDPESYVHRIGRTGRAGRTGTAITLVYPKEL 355


>gi|413943216|gb|AFW75865.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
           1 [Zea mays]
 gi|413943217|gb|AFW75866.1| putative DEAD-box ATP-dependent RNA helicase family protein isoform
           2 [Zea mays]
          Length = 414

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 204/382 (53%), Gaps = 27/382 (7%)

Query: 3   HDIQKCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
            ++     T++  ++ D +FE  +D+ +++ + +G+   GF K S IQ         G D
Sbjct: 21  QELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 80

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 81  VIQQAQSGTGKTATFCSGILQQL-DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GV 138

Query: 121 HVDYFIGGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R     V +VVG+PGR+  M++ + L  D++++F++DEAD++++ 
Sbjct: 139 KVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSR 198

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 199 GFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF- 257

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ +K+      L  L       Q VIF N + + + + + + + + 
Sbjct: 258 ------------YVNVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 305

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 306 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 365

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 366 HRIGRSGRFGRKGVAINFVTRD 387


>gi|408674498|ref|YP_006874246.1| DEAD/DEAH box helicase domain protein [Emticicia oligotrophica DSM
           17448]
 gi|387856122|gb|AFK04219.1| DEAD/DEAH box helicase domain protein [Emticicia oligotrophica DSM
           17448]
          Length = 576

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 193/352 (54%), Gaps = 13/352 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + + I + ++E GF   +PIQ    P VL G D I Q+++GTGK+  F + A+ + 
Sbjct: 7   SDLPVSEYILRAVEEMGFEFSTPIQSQGIPAVLRGGDVIGQAQTGTGKTAAFGIPAI-EA 65

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQ 139
           + +  +  Q +++ PTRE+A+Q+ + ++ +  + K LHV    GG   ER     K+ VQ
Sbjct: 66  VDVEDKNTQVLVMCPTRELALQVKEQIQKLAKYKKGLHVAAIYGGESYERQFLALKKGVQ 125

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGRI   I  K L++ S+++ I+DEAD+++N GF EDI  I S  P  +Q ++ S
Sbjct: 126 IVVGTPGRIMDHIDRKTLSLSSIKMAILDEADEMLNMGFREDIEKILSYAPDERQTVLFS 185

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT S + L+  +++  DP +IR          ++Q     P      +R   + + + +L
Sbjct: 186 ATMSPEILSIAKRFQKDPEVIRTVKTEISNANIEQF--FFP------VRREAKMEVMTRL 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           +        ++F+N + + + I   L    + AE L G   Q+ R   ++ F+ G   IL
Sbjct: 238 IDVNNLKLMLVFANTKSKVDEIVSELQIRGYAAEGLHGDMRQQVRTQVMNKFRAGTTTIL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           V TD+AARGID + VD V N ++P D   Y+HR+GR GR G  G     +S 
Sbjct: 298 VATDVAARGIDVSGVDAVFNYDVPQDLEYYVHRIGRTGRAGKTGKAFMFISG 349


>gi|327265107|ref|XP_003217350.1| PREDICTED: ATP-dependent RNA helicase DDX39-like [Anolis
           carolinensis]
          Length = 427

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 125/382 (32%), Positives = 202/382 (52%), Gaps = 19/382 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L + I
Sbjct: 48  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ-I 106

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKRPVQ 139
           +    Q   +++  TRE+A QI+        ++  + V  F GG  +++      K    
Sbjct: 107 EPTDGQVSVLVMCHTRELAFQISKEYERFSKYMSAVKVSVFFGGLSIKKDEDVLKKNCPH 166

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  +++ K LN+ +V+ F++DE DK++       D+  I+   P  KQ ++ 
Sbjct: 167 IVVGTPGRILALVRNKTLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMF 226

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ +  +D T+  L G++Q            L+  ++ +KL 
Sbjct: 227 SATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYV--------KLKDTEKNRKLF 278

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + R
Sbjct: 279 DLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRR 338

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           ILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL +T VS ES  K 
Sbjct: 339 ILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDESDAK- 397

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             ++ ++      NV  +P+ +
Sbjct: 398 --ILNDVQDRFEVNVAELPEEI 417


>gi|198430288|ref|XP_002129439.1| PREDICTED: similar to eukaryotic translation initiation factor 4A
           [Ciona intestinalis]
          Length = 430

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 124/349 (35%), Positives = 191/349 (54%), Gaps = 22/349 (6%)

Query: 16  SNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSI 73
           +N D + E  +D+ +++ + +G+   GF K S IQ  A    + G D I Q++SGTGK+ 
Sbjct: 49  TNYDKIVESFDDMCLKEELLRGIYAYGFEKPSAIQQRAIQPCIEGKDVIAQAQSGTGKTA 108

Query: 74  VFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER 133
            F ++ L K I   ++Q Q +++APTRE+A QI  VV ++G + +++H    IGGT V  
Sbjct: 109 TFAISVLQK-IDASLKQTQALVIAPTRELAQQIQKVVMALGDY-ESIHCHACIGGTSVRT 166

Query: 134 P-----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
                   P QIVVG+PGR+  MI  KYL+   V++F++DEAD++++ GF + I  I+  
Sbjct: 167 EIQVFQTNPPQIVVGTPGRVFDMINRKYLDTSKVKMFVLDEADEMLSRGFKDQIYEIFRT 226

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           +P   Q++++SAT   D L     +M DP+ I  +     L G++Q    + +       
Sbjct: 227 MPATIQVILLSATMPTDVLDVTTCFMPDPIRILVKKEELTLEGIQQFYVFVEK------- 279

Query: 249 YVDEEKKL---VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARL 305
              EE KL     L       Q VIFSN + + + + E L   +F    L G  DQ  R 
Sbjct: 280 ---EEWKLDTLCDLYETLTITQAVIFSNTRRKVDWLTEELQRRDFTVSALHGDMDQGDRE 336

Query: 306 ASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMG 354
             +  F+ G  R+L+TTDL ARGID   V LVIN ++P +   Y+HR+G
Sbjct: 337 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIG 385


>gi|8953382|emb|CAB96655.1| DEAD BOX RNA helicase RH15 [Arabidopsis thaliana]
          Length = 427

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/356 (35%), Positives = 193/356 (54%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIE 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
             P  Q   ++L  TRE+A QI +       ++ +  V  F GG  ++  K  ++     
Sbjct: 110 PSP-GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPH 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGR+  + + K L++ +VR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ I  +D A   L G+ Q            L  +++ +KL 
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEMEKNRKLN 280

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +     Q+ RL    SFK G  R
Sbjct: 281 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 340

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT V++ S
Sbjct: 341 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASAS 396


>gi|290462501|gb|ADD24298.1| Spliceosome RNA helicase BAT1 [Lepeophtheirus salmonis]
 gi|290562772|gb|ADD38781.1| Spliceosome RNA helicase BAT1 [Lepeophtheirus salmonis]
          Length = 426

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 126/383 (32%), Positives = 202/383 (52%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  I + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L ++ 
Sbjct: 48  DFLLKPEILRAIGDCGFEHPSEVQHECIPQAVLGMDILSQAKSGMGKTAVFVLATLQQM- 106

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++  + V  F GG  + + ++ ++    
Sbjct: 107 -EPVDGQVSVLVMCHTRELAFQISKEYERFSKYLPGIKVGVFFGGLAISKDEQVLKSNCP 165

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  +++ K LN+   + FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 166 HIVVGTPGRILALVRSKKLNLKHTKHFILDECDKMLEQLDMRRDVQEIFRNTPHEKQVMM 225

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ +  +D  +  L G++Q            L+  ++ +KL
Sbjct: 226 FSATLSKEVRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYV--------KLKDTEKNRKL 277

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            +LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 278 FELLDVLEFNQVVIFVKSVQRCVALAQLLIEQNFPAIAIHRGMSQEERLSRYQQFKDFQK 337

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D  TYLHR+ RAGR+GT+GL IT VS ES  K
Sbjct: 338 RILVATNLFGRGMDIERVNIVFNYDMPEDTDTYLHRVARAGRFGTKGLAITFVSDESDAK 397

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
               + E+      ++  +PD +
Sbjct: 398 ---TLNEVQDRFEVDITELPDEI 417


>gi|449458151|ref|XP_004146811.1| PREDICTED: eukaryotic initiation factor 4A-8-like [Cucumis sativus]
 gi|449476633|ref|XP_004154791.1| PREDICTED: eukaryotic initiation factor 4A-8-like [Cucumis sativus]
          Length = 413

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 201/376 (53%), Gaps = 27/376 (7%)

Query: 9   ARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSK 66
           A  +D  ++ D +++  + + +++ + +G+   GF K S IQ         G D I Q++
Sbjct: 26  ADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 85

Query: 67  SGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFI 126
           SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  + V   +
Sbjct: 86  SGTGKTATFCSGILQQL-DYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACV 143

Query: 127 GGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDI 182
           GGT V   +R +Q    +VVG+PGR+  M++ + L  D +R+F++DEAD++++ GF + I
Sbjct: 144 GGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQI 203

Query: 183 TWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPEC 242
             I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ        
Sbjct: 204 YDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF------- 256

Query: 243 KNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
                 YV+ +K+      L  L       Q VIF N + + + + + + + +       
Sbjct: 257 ------YVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 310

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+
Sbjct: 311 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370

Query: 357 GRYGTRGLVITIVSAE 372
           GR+G +G+ I  V+ E
Sbjct: 371 GRFGRKGVAINFVTTE 386


>gi|326499824|dbj|BAJ90747.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 518

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 197/382 (51%), Gaps = 22/382 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 134 RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGT 192

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +I+ PTRE+A+Q + V + +G H+K + V    GGT
Sbjct: 193 GKTAAFCIPALEK-IDQDRNAIQVVIVVPTRELALQTSQVCKELGKHLK-IQVMVTTGGT 250

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R  +PV ++VG+PGRI  + K     +    + +MDEADKL++  F   I  +
Sbjct: 251 SLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQL 310

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+  P +I   D    L G+ Q  A        
Sbjct: 311 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELT-LKGITQFYA-------- 361

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 362 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 418

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P  + TYLHR+GR+GR+G  
Sbjct: 419 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSSETYLHRVGRSGRFGHL 478

Query: 363 GLVITIVSAESLVKFHSLMGEI 384
           GL + +++ E     + +  E+
Sbjct: 479 GLAVNLITYEDRFNLYRIEQEL 500


>gi|6322323|ref|NP_012397.1| Tif2p [Saccharomyces cerevisiae S288c]
 gi|398365253|ref|NP_012985.3| Tif1p [Saccharomyces cerevisiae S288c]
 gi|124218|sp|P10081.3|IF4A_YEAST RecName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=Stimulator factor I 37 kDa component;
           AltName: Full=Translation initiation factor 1/2;
           AltName: Full=p37
 gi|160395531|sp|A6ZQJ1.1|IF4A_YEAS7 RecName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=Stimulator factor I 37 kDa component;
           AltName: Full=Translation initiation factor 1/2;
           AltName: Full=p37
 gi|192988258|pdb|2VSO|A Chain A, Crystal Structure Of A Translation Initiation Complex
 gi|192988259|pdb|2VSO|B Chain B, Crystal Structure Of A Translation Initiation Complex
 gi|192988263|pdb|2VSX|A Chain A, Crystal Structure Of A Translation Initiation Complex
 gi|192988264|pdb|2VSX|B Chain B, Crystal Structure Of A Translation Initiation Complex
 gi|4621|emb|CAA31301.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|4623|emb|CAA31302.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|486521|emb|CAA82138.1| TIF1 [Saccharomyces cerevisiae]
 gi|854559|emb|CAA60817.1| translation initiation factor [Saccharomyces cerevisiae]
 gi|1015544|emb|CAA89433.1| TIF2 [Saccharomyces cerevisiae]
 gi|151941599|gb|EDN59962.1| translation initiation factor eIF4A subunit [Saccharomyces
           cerevisiae YJM789]
 gi|151944988|gb|EDN63243.1| translation initiation factor eIF4A subunit [Saccharomyces
           cerevisiae YJM789]
 gi|190409872|gb|EDV13137.1| eukaryotic initiation factor 4A [Saccharomyces cerevisiae RM11-1a]
 gi|259147888|emb|CAY81138.1| Tif1p [Saccharomyces cerevisiae EC1118]
 gi|285812764|tpg|DAA08662.1| TPA: Tif2p [Saccharomyces cerevisiae S288c]
 gi|285813313|tpg|DAA09210.1| TPA: Tif1p [Saccharomyces cerevisiae S288c]
 gi|323304041|gb|EGA57820.1| Tif1p [Saccharomyces cerevisiae FostersB]
 gi|323304434|gb|EGA58205.1| Tif2p [Saccharomyces cerevisiae FostersB]
 gi|323308246|gb|EGA61495.1| Tif1p [Saccharomyces cerevisiae FostersO]
 gi|323332640|gb|EGA74046.1| Tif1p [Saccharomyces cerevisiae AWRI796]
 gi|323332976|gb|EGA74378.1| Tif2p [Saccharomyces cerevisiae AWRI796]
 gi|323336789|gb|EGA78053.1| Tif1p [Saccharomyces cerevisiae Vin13]
 gi|323337041|gb|EGA78297.1| Tif2p [Saccharomyces cerevisiae Vin13]
 gi|323347652|gb|EGA81917.1| Tif1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323348035|gb|EGA82293.1| Tif2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323354172|gb|EGA86018.1| Tif1p [Saccharomyces cerevisiae VL3]
 gi|323354391|gb|EGA86230.1| Tif2p [Saccharomyces cerevisiae VL3]
 gi|349579062|dbj|GAA24225.1| K7_Tif2p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|349579618|dbj|GAA24780.1| K7_Tif1p [Saccharomyces cerevisiae Kyokai no. 7]
 gi|365764919|gb|EHN06437.1| Tif1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|392298200|gb|EIW09298.1| Tif1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 395

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 134/368 (36%), Positives = 208/368 (56%), Gaps = 24/368 (6%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ +++ + +G+   GF + S IQ  A   ++ G+D + Q++SGTGK+  F +AAL + 
Sbjct: 25  DDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQR- 83

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ-VERPK--RPVQI 140
           I   V+ PQ ++LAPTRE+A+QI  VV ++  H+ ++ V   IGGT  VE  +  R  QI
Sbjct: 84  IDTSVKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSFVEDAEGLRDAQI 142

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   I+ +    D +++FI+DEAD+++++GF E I  I++ LPP  Q++++SA
Sbjct: 143 VVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSA 202

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T  +D L    K+M +P+ I  +     L G+KQ    + E          EE K   L 
Sbjct: 203 TMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEE----------EEYKYECLT 252

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + E +   L N  F    +     Q+ R   +  F+ G  R
Sbjct: 253 DLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSR 312

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE----- 372
           IL++TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+ E     
Sbjct: 313 ILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAM 372

Query: 373 -SLVKFHS 379
             L KF+S
Sbjct: 373 RELEKFYS 380


>gi|217970097|ref|YP_002355331.1| DEAD/DEAH box helicase [Thauera sp. MZ1T]
 gi|217507424|gb|ACK54435.1| DEAD/DEAH box helicase domain protein [Thauera sp. MZ1T]
          Length = 677

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 194/351 (55%), Gaps = 14/351 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +  P+   L E G+   SPIQ A  P +L G+D + ++++GTGK+  F +  L KL 
Sbjct: 20  DLQLPAPLLSALAEVGYETPSPIQAACIPQLLAGHDILGEAQTGTGKTAAFALPMLAKL- 78

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERPKRPVQI 140
            L   +PQ ++L PTRE+A+Q+ +       H+KN HV    GG     Q+ +  R  Q+
Sbjct: 79  DLADTRPQVLVLTPTRELAIQVAEAFAKYAHHLKNFHVLPIYGGQSMVVQLRQLSRGAQV 138

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++ + L +D+++  ++DEAD+++  GF++D+ WI    P  +Q  + SA
Sbjct: 139 VVGTPGRVMDHLERESLKLDALKAIVLDEADEMLRMGFIDDVEWILEHTPAERQTALFSA 198

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T  +      ++++ +P  I+   AT  +  + Q   L+        R VD+   L ++L
Sbjct: 199 TMPNVIREVARRHLRNPQEIKIRAATSTVAKISQRYWLV--------RGVDKLDALTRIL 250

Query: 261 -SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
            ++  F+  ++F   ++  E + + LA   + A  L+G  +Q  R   ++  K G + I+
Sbjct: 251 DAEESFDAALVFVRTKIATEELADKLAARGYAAAALNGDMNQGLRERVIEQLKNGALDIV 310

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           + TD+AARGID   V  VIN +IP+D   Y+HR+GR GR G  G+ I  V+
Sbjct: 311 IATDVAARGIDVPRVSHVINYDIPYDTEAYVHRIGRTGRAGREGVAILFVA 361


>gi|405373066|ref|ZP_11027919.1| Cold-shock DEAD-box protein A [Chondromyces apiculatus DSM 436]
 gi|397087830|gb|EJJ18847.1| Cold-shock DEAD-box protein A [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 798

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 197/368 (53%), Gaps = 18/368 (4%)

Query: 19  DVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVA 78
           D+ F +D+ + +PIRQ L E G+   +P+Q  AF   + G D IV+SK+GTGK+  F   
Sbjct: 20  DIGF-DDMNLSEPIRQALAERGYTNPTPVQARAFRPAMEGKDLIVRSKTGTGKTAAF--- 75

Query: 79  ALNKLIKLPV--QQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKR 136
            L  L K+P   ++ + +IL PTRE+A+Q+ D ++ +G  +K L V    GG  +++ + 
Sbjct: 76  GLPLLEKIPADERRVRALILCPTRELAIQVADELKLLG-KIKGLKVAAIYGGASMKQQED 134

Query: 137 PVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM 192
            ++    I+VG+PGR+   I    L +D+    ++DEAD+++N GF E++T I  +LP  
Sbjct: 135 ALEEGTPIIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEEVTRILDRLPKT 194

Query: 193 KQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE 252
           +Q+L+ SAT   D    + +Y  +         T  L G    V  I   +        +
Sbjct: 195 RQVLLFSATVPTDIQNLIARYTTN-------AETLLLSGDVFTVEHIHHIRYDVSDAFPK 247

Query: 253 EKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFK 312
            + L+ +L +      +IF N +    ++   L    F AE L+G   QK R   +   K
Sbjct: 248 PRNLIYVLEKEEPQNAIIFCNTRDDTALVTAVLNRNGFDAELLNGDLPQKERERVMGKVK 307

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           RG+V  +V TD+AARGID + ++ VIN  +P D A YLHR+GR GR G +G  I + S  
Sbjct: 308 RGEVAFMVATDIAARGIDISGLEYVINYSLPEDPAVYLHRVGRTGRIGNKGTAINLFSGR 367

Query: 373 SLVKFHSL 380
            L  + +L
Sbjct: 368 ELATYTAL 375


>gi|88857246|ref|ZP_01131889.1| RNA helicase DeaD [Pseudoalteromonas tunicata D2]
 gi|88820443|gb|EAR30255.1| RNA helicase DeaD [Pseudoalteromonas tunicata D2]
          Length = 624

 Score =  197 bits (500), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 132/433 (30%), Positives = 224/433 (51%), Gaps = 39/433 (9%)

Query: 31  PIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQ 90
           P+ Q + E G++  +PIQ  A P +L G D + ++++GTGK+  F +  L++L    ++Q
Sbjct: 17  PVLQAINEMGYITPTPIQSQAIPSLLAGKDVLGEAQTGTGKTAAFGLPLLSRL-DADLKQ 75

Query: 91  PQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPG 146
           PQ +++ PTRE+A+Q+ + +     H++ L V    GG     Q+    R  QIVVG+PG
Sbjct: 76  PQMLVVCPTRELAIQVAEALTDFAKHIRGLFVATVYGGQSYTPQLRDLARGPQIVVGTPG 135

Query: 147 RIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDN 206
           R+   IK   L +D+++  ++DEAD+++N GF+EDI WI +Q+P   QM   SAT     
Sbjct: 136 RMMDHIKKGRLKLDNLKACVLDEADEMLNMGFLEDIEWILNQIPDQTQMAFFSATMPAPI 195

Query: 207 LATLQKYMVDPLLIR--PEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
                +++ DP+ ++   + + +P +  K            ++  + +   L ++     
Sbjct: 196 KKITNQFLTDPIHVKIAVQKSDKPKITQKSW----------TVGRIGKTVGLERIAEVVD 245

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
           ++  ++F   +    V+ E+L +  F A  L+G   Q+ R   ++  K G++ IL+ TD+
Sbjct: 246 YDAMIVFVRTRNDTLVLAEHLVSKGFKASALNGDMQQQDRERIVEQLKNGRINILIATDV 305

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS---AESLVKFHSLM 381
            ARG+D   +  VIN ++PHD+ +Y+HR+GR GR G  G  I   S     SL +   + 
Sbjct: 306 VARGLDVPRITHVINYDLPHDSESYVHRIGRTGRAGREGEAILFASHREVRSLSRLERIT 365

Query: 382 -GEINLDHAFNVGLVPDNLTGDQINWT--QRVQTLLAKPL---DQAQEREDVEQTAEESS 435
            G+I          V D  T +Q+     +R Q  L K +   D A  +  V Q AE+S 
Sbjct: 366 EGKIE---------VFDMPTAEQLGQARIERTQAALVKAMEVNDLANFQAIVSQMAEQS- 415

Query: 436 KVENTKPLRGAPS 448
              NT PL  A +
Sbjct: 416 ---NTTPLELAAA 425


>gi|358054409|dbj|GAA99335.1| hypothetical protein E5Q_06030 [Mixia osmundae IAM 14324]
          Length = 1043

 Score =  197 bits (500), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 130/382 (34%), Positives = 202/382 (52%), Gaps = 22/382 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DVL      FE D  +++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 453 QTEDVLRTKGNEFE-DYFLKRELLMGIFEAGFEKPSPIQEEAIPIALAGRDILARAKNGT 511

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL K +   V + Q +IL PTRE+A+Q + V +++G H+  + +    GGT
Sbjct: 512 GKTGSFVIPALEK-VNPKVNKIQALILVPTRELALQTSQVCKTLGKHL-GVQIMVTTGGT 569

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R +  V IVVG+PGR+  +      ++ +   F+MDEADKL++  F   I  I
Sbjct: 570 SLKDDILRLQETVHIVVGTPGRVLDLASKGIADVSACPTFVMDEADKLLSPEFTLVIEQI 629

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
            S LP  +Q+++ SAT+         K+M  P  I   D    L GV Q  A        
Sbjct: 630 LSLLPKDRQVMLFSATFPLLVKDFKDKHMTKPYEINLMDELT-LRGVTQYYA-------- 680

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +++E +K   L  L S+   NQ +IF+N   R E++ + +    +   Y      Q 
Sbjct: 681 ---FLEERQKVHCLNTLFSKLQINQSIIFTNSTSRVELLAKKITELGYSCFYSHAKMLQA 737

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ GK R LV +DL  RGID  +V++VIN + P  + +YLHR+GR+GR+G  
Sbjct: 738 DRNRVFHDFRSGKCRNLVCSDLLTRGIDVPSVNVVINFDFPKQSESYLHRIGRSGRFGHL 797

Query: 363 GLVITIVSAESLVKFHSLMGEI 384
           GL I +++ E     + +  E+
Sbjct: 798 GLAINLITYEDRFNLYRIEQEL 819


>gi|413934786|gb|AFW69337.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
           mays]
          Length = 411

 Score =  197 bits (500), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 123/382 (32%), Positives = 204/382 (53%), Gaps = 27/382 (7%)

Query: 3   HDIQKCARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYD 60
            ++     T++  ++ D +FE  +D+ +++ + +G+   GF K S IQ         G D
Sbjct: 18  QELLSTGETEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 77

Query: 61  AIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNL 120
            I Q++SGTGK+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  +
Sbjct: 78  VIQQAQSGTGKTATFCSGILQQL-DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GV 135

Query: 121 HVDYFIGGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT 176
            V   +GGT V   +R     V +VVG+PGR+  M++ + L  D++++F++DEAD++++ 
Sbjct: 136 KVHACVGGTSVREDQRILGSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSR 195

Query: 177 GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLV 236
           GF + I  I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ  
Sbjct: 196 GFKDQIYDIFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF- 254

Query: 237 ALIPECKNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANF 290
                       YV+ +K+      L  L       Q VIF N + + + + + + + + 
Sbjct: 255 ------------YVNVDKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDH 302

Query: 291 GAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYL 350
                 G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YL
Sbjct: 303 TVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYL 362

Query: 351 HRMGRAGRYGTRGLVITIVSAE 372
           HR+GR+GR+G +G+ I  V+ +
Sbjct: 363 HRIGRSGRFGRKGVAINFVTRD 384


>gi|432331921|ref|YP_007250064.1| DNA/RNA helicase, superfamily II [Methanoregula formicicum SMSP]
 gi|432138630|gb|AGB03557.1| DNA/RNA helicase, superfamily II [Methanoregula formicicum SMSP]
          Length = 533

 Score =  197 bits (500), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 115/364 (31%), Positives = 193/364 (53%), Gaps = 17/364 (4%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ + K + + +++ GF + SPIQ  A P +  G D   Q+++GTGK+  F +  + + 
Sbjct: 8   SDLHLGKELGKAIEDMGFEEPSPIQALAIPLIQAGRDVTAQAQTGTGKTAAFGIPIIGR- 66

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I    +  Q I+L PTRE+A+QI +   ++ AH+  + V    GG  +ER  R +Q    
Sbjct: 67  IDPSRRSVQAIVLCPTRELAIQIAEEFSNLLAHMPRISVLPVYGGQPIERQLRALQAGVH 126

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IV+G+PGR+   +  + L ++ V   ++DEAD++++ GF +DI  I  ++P  +Q L+ S
Sbjct: 127 IVIGTPGRVMDHLDRRTLRLEDVETVVLDEADQMLDMGFRDDIELILRKVPQKRQTLLFS 186

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK--KLV 257
           AT     L   +++   P  +R E A             +P+ +   +   + EK   L 
Sbjct: 187 ATMPKPILEISRQFQNKPEFVRVEYAE----------LTVPQIEQSYIEVREREKLDVLC 236

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +L+     N  +IF N + R E +   +    + A+ L G   Q  R   +  F++G + 
Sbjct: 237 RLIDLADPNLAIIFCNTKRRAEELSTKVRARGYRADELHGDMKQSQRDRVMGGFRKGIID 296

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           IL+ TD+AARGID  +VD+VIN +IP D   Y+HR+GR GR G  G  I+ V+ +   K 
Sbjct: 297 ILIATDVAARGIDVDDVDMVINYDIPQDVEYYVHRIGRTGRAGRSGRAISFVTPKDFTKL 356

Query: 378 HSLM 381
             +M
Sbjct: 357 REIM 360


>gi|358385846|gb|EHK23442.1| hypothetical protein TRIVIDRAFT_147252 [Trichoderma virens Gv29-8]
          Length = 490

 Score =  197 bits (500), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 195/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV     + FEN  L ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GT
Sbjct: 39  QTEDVTKTKGLEFENFAL-KRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGT 97

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+ AL + I   V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 98  GKTAAFVIPALER-INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 155

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 156 GLRDDILRLQEPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQL 215

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K M  P  I   D    L G+ Q  A        
Sbjct: 216 LQFHPKDRQVMLFSATFPLSVKDFSDKNMTSPYEINLMDELT-LRGITQYYA-------- 266

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q+
Sbjct: 267 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHARMQQQ 323

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GR+G  
Sbjct: 324 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHL 383

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 384 GLAINLI 390


>gi|398313025|emb|CCI88202.1| ATP-dependent RNA helicase, partial [Saccharomyces eubayanus]
          Length = 393

 Score =  197 bits (500), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 127/370 (34%), Positives = 201/370 (54%), Gaps = 25/370 (6%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FE+  L E  +R G+   GF   S IQ  A   +++G D I Q++SGTGK+  F +  L 
Sbjct: 25  FESMDLKEDLLR-GIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL- 82

Query: 82  KLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVER-----PKR 136
           + I L  +  Q +IL+PTRE+A QI  VV ++G ++ N++     GG  ++       K 
Sbjct: 83  QAIDLRKKDLQALILSPTRELANQIGQVVTNLGDYM-NVNAFAMTGGKTLKDDLKKLQKN 141

Query: 137 PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT--GFVEDITWIYSQLPPMKQ 194
             Q+V G+PGR+  MIK + L   +V++ I+DEAD+L++   GF + I  I+++LP   Q
Sbjct: 142 GCQVVSGTPGRVLDMIKRQMLQTRNVQVLILDEADELLSETLGFKQQIYDIFAKLPKNCQ 201

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
           ++VVSAT + D L   +K+M DP+ I  +     L G+KQ V             VD+E 
Sbjct: 202 VVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVV-----------NVDKED 250

Query: 255 ----KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
                L  +       QCVIF N + + + + + L  +NF    + G   Q+ R   ++ 
Sbjct: 251 WKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLTQSNFAVVSMHGDMKQEERDKVMND 310

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           F+ G  R+L++TD+ ARGID   V LVIN ++P     Y+HR+GR+GR+G +G+ I  ++
Sbjct: 311 FRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFIT 370

Query: 371 AESLVKFHSL 380
                K   +
Sbjct: 371 KADSAKLREI 380


>gi|251796178|ref|YP_003010909.1| DEAD/DEAH box helicase [Paenibacillus sp. JDR-2]
 gi|247543804|gb|ACT00823.1| DEAD/DEAH box helicase domain protein [Paenibacillus sp. JDR-2]
          Length = 578

 Score =  197 bits (500), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 190/342 (55%), Gaps = 20/342 (5%)

Query: 36  LQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTII 95
           LQ NG    +P+Q  A P +L+G D I Q+++GTGK+I F +  L + I +  +Q Q +I
Sbjct: 18  LQSNGITSPTPVQKKAIPVLLSGQDVIAQAQTGTGKTIAFTLPILQR-IDIDKEQVQALI 76

Query: 96  LAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----QIVVGSPGRIKQM 151
           L PTRE+A+QIT  ++ + A V    V    GG  V+   R +     IVV +PGR+   
Sbjct: 77  LTPTRELAIQITSELKKLAAAV-GAKVLAAYGGQDVDAQIRKLNNSPHIVVATPGRLIDH 135

Query: 152 IKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQ 211
           ++ + +N+  +++ ++DEAD++++ GF+ ++  I  Q P  +Q ++ SAT         +
Sbjct: 136 MRRETINLGKLKMLVLDEADQMLHMGFLPEVQNIVDQTPRARQTMLFSATMPDQIKRLAE 195

Query: 212 KYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDE--EKKLVQLL-SQTPFNQC 268
            YM  P+ I+ + A   L  +KQLV          +   D   +K L+ ++ +Q P+   
Sbjct: 196 NYMKTPVDIKIQSANVTLDNIKQLV----------IETTDRGRQKALISMIETQRPY-LA 244

Query: 269 VIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARG 328
           VIF   ++R + + ++L +  F ++ L G   Q  R   +  F+  K++ILV TD+AARG
Sbjct: 245 VIFCRTKVRAKKLNKDLQDLGFESDELHGDLTQAKREQVMKRFRDAKLQILVATDVAARG 304

Query: 329 IDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +D   V  V N ++P D+  Y+HR+GR GR G RG  ITI S
Sbjct: 305 LDVEGVTHVFNFDVPTDSEIYIHRIGRTGRAGQRGTAITIAS 346


>gi|307135861|gb|ADN33729.1| helicase [Cucumis melo subsp. melo]
          Length = 413

 Score =  197 bits (500), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 124/376 (32%), Positives = 201/376 (53%), Gaps = 27/376 (7%)

Query: 9   ARTKDVLSNIDVLFE--NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSK 66
           A  +D  ++ D +++  + + +++ + +G+   GF K S IQ         G D I Q++
Sbjct: 26  ADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 85

Query: 67  SGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFI 126
           SGTGK+  F    L +L    + Q Q ++LAPTRE+A QI  V+R++G ++  + V   +
Sbjct: 86  SGTGKTATFCSGILQQL-DYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACV 143

Query: 127 GGTQVERPKRPVQ----IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDI 182
           GGT V   +R +Q    +VVG+PGR+  M++ + L  D +R+F++DEAD++++ GF + I
Sbjct: 144 GGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQI 203

Query: 183 TWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPEC 242
             I+  LP   Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ        
Sbjct: 204 YDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF------- 256

Query: 243 KNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
                 YV+ +K+      L  L       Q VIF N + + + + + + + +       
Sbjct: 257 ------YVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 310

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+
Sbjct: 311 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 370

Query: 357 GRYGTRGLVITIVSAE 372
           GR+G +G+ I  V+ E
Sbjct: 371 GRFGRKGVAINFVTTE 386


>gi|261856513|ref|YP_003263796.1| DEAD/DEAH box helicase [Halothiobacillus neapolitanus c2]
 gi|261836982|gb|ACX96749.1| DEAD/DEAH box helicase domain protein [Halothiobacillus
           neapolitanus c2]
          Length = 594

 Score =  197 bits (500), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 111/360 (30%), Positives = 201/360 (55%), Gaps = 13/360 (3%)

Query: 15  LSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIV 74
           +S  + +  +D  +  P+ + ++E G+   SPIQ  + P +L G D +  +++GTGK+  
Sbjct: 1   MSEENTILFSDFALAAPLLRSVEELGYESPSPIQAKSIPVLLEGKDVLGMAQTGTGKTGA 60

Query: 75  FVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP 134
           F +  L++ I + ++ PQ ++LAPTRE+A+Q+ + +++   H+ + HV    GG  +E  
Sbjct: 61  FALPLLSR-IDINLRAPQLLVLAPTRELAIQVAEAMQAYARHLPDFHVLPVYGGQAMEPQ 119

Query: 135 ----KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLP 190
               KR V +VVG+PGRI+  IK   L ++ ++  ++DEAD+++  GF++D+  I S+ P
Sbjct: 120 LRGLKRGVHVVVGTPGRIQDHIKRGTLKLNQIQAVVLDEADEMLRMGFIDDVDEILSKTP 179

Query: 191 PMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYV 250
             +Q+ + SAT         Q+++ +P+ I  + +T  +  + Q        +  ++  +
Sbjct: 180 ANRQVALFSATMPDQIRRIAQRHLRNPVEIAIKSSTSTVKAINQ--------RYWAVSGM 231

Query: 251 DEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
            +   L ++L    F+  +IF   ++    + E L    + A  L+G  +Q  R  ++D 
Sbjct: 232 HKLDALTRILEVEEFDAVIIFVRTKVATTELAEKLEARGYAASPLNGDMNQAMREKAIDR 291

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            KRG + I++ TD+AARGID A V  V+N +IP D  +Y+HR+GR GR G  G  I  V+
Sbjct: 292 LKRGSLDIIIATDVAARGIDVARVSHVVNYDIPLDTESYVHRIGRTGRAGRSGEAILFVA 351


>gi|334340505|ref|YP_004545485.1| DEAD/DEAH box helicase [Desulfotomaculum ruminis DSM 2154]
 gi|334091859|gb|AEG60199.1| DEAD/DEAH box helicase domain protein [Desulfotomaculum ruminis DSM
           2154]
          Length = 532

 Score =  197 bits (500), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 113/350 (32%), Positives = 193/350 (55%), Gaps = 14/350 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ ++  +  GL + GF + +PIQ  A P VL G+D I Q+++GTGK+  F +  + +L 
Sbjct: 12  DLQLDPRVVDGLIDMGFEEPTPIQQLAVPLVLAGHDIIGQAQTGTGKTAAFGIPLIQRL- 70

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQI 140
               +  Q IIL PTRE+A+Q+ + +  +G + + + V    GG  ++R     ++ VQ+
Sbjct: 71  DFRKKGVQVIILTPTRELAIQVGEEITKIGRY-RRIRVLPIYGGQSIDRQIKSLRQGVQV 129

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGR+   ++ + L +D + + ++DEAD++++ GF+EDI  I    PP++Q L+ SA
Sbjct: 130 VVGTPGRLLDHLRRQTLKLDQITMAVLDEADEMLDMGFIEDIEEILRHTPPVRQTLLFSA 189

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T   +     ++Y+ +P L+        +  ++Q+    PE          + + L +LL
Sbjct: 190 TMPDEITRLARQYLTEPKLVTVSKTNLTVPQIEQVYYEAPE--------KHKLEALCRLL 241

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
             T   Q ++F   +   + +   L    + A  L G   Q+ R   +  F+ G+V +LV
Sbjct: 242 DITDIAQGIVFCRTKRGVDDLVSGLQARGYTAVSLHGDLSQQQRNTVMRQFRSGEVELLV 301

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            TD+AARG+D   V  VIN +IP D   Y+HR+GR GR G  G+ ITI++
Sbjct: 302 ATDVAARGLDIEGVSHVINYDIPQDPEFYVHRIGRTGRAGRSGVAITIIT 351


>gi|392298627|gb|EIW09724.1| Tif1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 369

 Score =  196 bits (499), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 133/364 (36%), Positives = 205/364 (56%), Gaps = 24/364 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +++ + +G+   GF + S IQ  A   ++ G+D + Q++SGTGK+  F +AAL + I   
Sbjct: 3   LDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQR-IDTS 61

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ-VERPK--RPVQIVVGS 144
           V+ PQ ++LAPTRE+A+QI  VV ++  H+ ++ V   IGGT  VE  +  R  QIVVG+
Sbjct: 62  VKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSFVEDAEGLRDAQIVVGT 120

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+   I+ +    D +++FI+DEAD+++++GF E I  I++ LPP  Q++++SAT  +
Sbjct: 121 PGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPN 180

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LVQLLS 261
           D L    K+M +P+ I  +     L G+KQ    + E          EE K   L  L  
Sbjct: 181 DVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEE----------EEYKYECLTDLYD 230

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
                Q VIF N + + E +   L N  F    +     Q+ R   +  F+ G  RIL++
Sbjct: 231 SISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILIS 290

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE------SLV 375
           TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+ E       L 
Sbjct: 291 TDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELE 350

Query: 376 KFHS 379
           KF+S
Sbjct: 351 KFYS 354


>gi|407068769|ref|ZP_11099607.1| ATP-dependent RNA helicase [Vibrio cyclitrophicus ZF14]
          Length = 662

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 116/355 (32%), Positives = 190/355 (53%), Gaps = 13/355 (3%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           N++ +   I   L   GFV  +PIQ AA P +L G DA+ ++++GTGK+  F +  LNK 
Sbjct: 9   NELALNDNILSALDSMGFVSPTPIQAAAIPLLLEGRDALGKAQTGTGKTAAFSLPLLNK- 67

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQ 139
           I L   +PQ II+APTRE+A+Q+   ++++G  +  L V    GG     Q+    R   
Sbjct: 68  INLNQHKPQAIIMAPTRELAIQVAAEIKNLGRDINGLKVLEIYGGASIVDQMRALSRGAH 127

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           IVVG+PGR+K ++    L++D    F++DEAD+++  GFV+D+TWI  Q P   Q ++ S
Sbjct: 128 IVVGTPGRVKDLLTRDRLHLDEAHTFVLDEADEMLKMGFVDDVTWILEQAPETAQRVLFS 187

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           AT        + +Y+ +P  +        +  V Q   ++        + V++++ + +L
Sbjct: 188 ATMPPMVKTIVDRYLRNPARVDVAGTNHTVDKVAQNFWVV--------KGVEKDEAMSRL 239

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           L     +  ++F   +   E + + L+   F A  L G   Q  R  ++D  K+G + IL
Sbjct: 240 LETEETDASIVFVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDIL 299

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+ ARG+D   +  V N +IP D  +Y+HR+GR GR G +G  I +V    +
Sbjct: 300 VATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQI 354


>gi|146197837|dbj|BAF57631.1| DEAD box polypeptide 48 protein [Dugesia japonica]
          Length = 376

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 118/384 (30%), Positives = 207/384 (53%), Gaps = 23/384 (5%)

Query: 23  ENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNK 82
           E+ + +++ + +G+   GF K S IQ      ++ G D I Q++SGTGK+ +  +++L +
Sbjct: 4   EDKMSLKEDLLRGIYAYGFEKPSAIQARTIKQIVKGRDVIAQAQSGTGKTSLIAISSL-Q 62

Query: 83  LIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV---- 138
           L  + +++ Q +IL+PTRE+A Q   V+ ++G ++ N+     IGG  + +  + +    
Sbjct: 63  LTDINLRETQVLILSPTRELAQQTQKVILALGDYM-NVQCHACIGGASMAQDMKKLDYGQ 121

Query: 139 QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVV 198
            IV G+PGR+  M++ + L    +   ++DEAD++++ GF E I  IY  LPP  Q++++
Sbjct: 122 HIVSGTPGRVFDMMQRRNLRTGKISTLVLDEADEMLDKGFKEQIYQIYRYLPPGTQVILI 181

Query: 199 SATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK--- 255
           SAT  HD L    K+M +P+ I  +     L G+KQ    +            EE K   
Sbjct: 182 SATLPHDILEMTSKFMTNPIRILVKRDELTLEGIKQYFVSVER----------EEWKFDT 231

Query: 256 LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGK 315
           L  +       Q VIF N + + E + + +   NF    + G   Q  R      F+  +
Sbjct: 232 LCDIYDTVTVTQVVIFCNTKRKVEWLTDKMRENNFTVSSIHGDMPQGERDEITRQFRALE 291

Query: 316 VRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLV 375
            R+L+TTD+ ARGID  +V LVIN ++P++   Y+HR+GR+GRYG +G+ I  V ++ + 
Sbjct: 292 TRVLITTDVWARGIDVQHVSLVINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKSDDV- 350

Query: 376 KFHSLMGEINLDHAFNVGLVPDNL 399
               ++ +I   +A  +  +P N+
Sbjct: 351 ---RILRDIEQFYATQIDEMPMNM 371


>gi|18416493|ref|NP_568245.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
 gi|186522075|ref|NP_568244.2| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
 gi|108861899|sp|Q9LFN6.2|RH56_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 56
 gi|322510107|sp|Q56XG6.3|RH15_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 15
 gi|14190381|gb|AAK55671.1|AF378868_1 AT5g11200/F2I11_90 [Arabidopsis thaliana]
 gi|15450405|gb|AAK96496.1| AT5g11170/F2I11_60 [Arabidopsis thaliana]
 gi|16323360|gb|AAL15393.1| AT5g11200/F2I11_90 [Arabidopsis thaliana]
 gi|24111365|gb|AAN46806.1| At5g11170/F2I11_60 [Arabidopsis thaliana]
 gi|110740954|dbj|BAE98572.1| DEAD BOX RNA helicase RH15 - like protein [Arabidopsis thaliana]
 gi|332004259|gb|AED91642.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
 gi|332004262|gb|AED91645.1| DEAD-box ATP-dependent RNA helicase 56 [Arabidopsis thaliana]
          Length = 427

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/356 (35%), Positives = 193/356 (54%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIE 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
             P  Q   ++L  TRE+A QI +       ++ +  V  F GG  ++  K  ++     
Sbjct: 110 PSP-GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPH 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGR+  + + K L++ +VR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ I  +D A   L G+ Q            L  +++ +KL 
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEMEKNRKLN 280

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +     Q+ RL    SFK G  R
Sbjct: 281 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 340

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT V++ S
Sbjct: 341 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASAS 396


>gi|344343809|ref|ZP_08774676.1| DEAD/DEAH box helicase domain protein [Marichromatium purpuratum
           984]
 gi|343804793|gb|EGV22692.1| DEAD/DEAH box helicase domain protein [Marichromatium purpuratum
           984]
          Length = 625

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 112/349 (32%), Positives = 192/349 (55%), Gaps = 13/349 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +   + Q + + G+   +P+Q    P++L G D + Q+++GTGK+  F +  L++ I
Sbjct: 12  DLGLSPAVTQAVGDLGYESPTPVQSQCIPHLLAGRDLLGQAQTGTGKTAAFALPLLSR-I 70

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
            L V+ PQ ++LAPTRE+A+Q+ +  +   AH+    V    GG     Q+ + KR  Q+
Sbjct: 71  DLEVKAPQILVLAPTRELALQVAEAFQEYAAHLPGFLVLPIYGGQSYGLQISQLKRRPQV 130

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +VG+PGR+   I+   L++  +R  ++DEAD+++N GF EDI WI+ Q P  +Q+ + SA
Sbjct: 131 IVGTPGRVMDHIRRGTLSLAGIRALVLDEADEMLNMGFAEDIDWIFDQAPEERQVALFSA 190

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLL 260
           T         +K + DP+L++    +  +  + Q       C       +D    L ++L
Sbjct: 191 TMPRAIRQVAEKRLRDPMLVQVAADSETVDTIDQ-----HHCVVTRFHKLD---VLTRIL 242

Query: 261 SQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILV 320
               F+  V+F   +     + + L    F AE L+G  +Q+ R  ++D  K+G++ ILV
Sbjct: 243 EIEEFDGMVVFVRTKHGTTELADKLKAHGFAAEALNGDMNQEMRERTIDRLKQGQLDILV 302

Query: 321 TTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            TD+AARG+D   +  V+N +IP D + Y+HR+GR GR G  G  + +V
Sbjct: 303 ATDVAARGLDVERISHVVNFDIPTDPSAYVHRIGRTGRAGRAGRALLLV 351


>gi|408391607|gb|EKJ70979.1| hypothetical protein FPSE_08838 [Fusarium pseudograminearum CS3096]
          Length = 524

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/367 (35%), Positives = 195/367 (53%), Gaps = 22/367 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           +T+DV +   + FEN  L ++ +  G+ E GF K SPIQ  + P  L G D + ++K+GT
Sbjct: 39  QTEDVTNTKGLEFENFAL-KRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGT 97

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  FV+  L + I   + + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT
Sbjct: 98  GKTAAFVIPTLER-INPKISKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGT 155

Query: 130 ----QVERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R + PV IVVG+PGRI  +      ++    +FIMDEADKL++  F   I  +
Sbjct: 156 GLRDDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQL 215

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
               P  +Q+++ SAT+         K MV P  I   D    L G+ Q  A        
Sbjct: 216 LQFHPKDRQVMLFSATFPLSVKDFSDKNMVSPYEINLMDELT-LRGITQYYA-------- 266

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E++K   L  L S+   NQ +IF N   R E++ + +    +   Y      Q 
Sbjct: 267 ---FVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQH 323

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
           AR      F+ G  R LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  
Sbjct: 324 ARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHL 383

Query: 363 GLVITIV 369
           GL I ++
Sbjct: 384 GLAINLI 390


>gi|359684699|ref|ZP_09254700.1| superfamily II DNA/RNA helicase [Leptospira santarosai str.
           2000030832]
          Length = 540

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 203/384 (52%), Gaps = 25/384 (6%)

Query: 35  GLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQTI 94
            +QE G+ + +PIQ  + P+ L G D    +++GTGK++ F++  ++ ++   ++    +
Sbjct: 15  AIQEIGYTELTPIQEKSIPHGLEGKDITGLAQTGTGKTVAFLIPVVHTILTKSIRGVSAL 74

Query: 95  ILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVGSPGRIKQ 150
           ILAPTRE+ +QI+D  + +  H   +     IGGT  +   + ++    I+V +PGR+  
Sbjct: 75  ILAPTRELTMQISDEAKKLLKHSDGIRAVPIIGGTDYKSQNKDLEGLNGIIVATPGRLID 134

Query: 151 MIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLATL 210
           MIK   +++ +V  F++DEAD++++ GF++DI W+  +    KQ L+ SAT S D +   
Sbjct: 135 MIKSGSIDISNVEFFVLDEADRMLDMGFIQDIRWLLHKCKNRKQTLLFSATLSVDVMRLA 194

Query: 211 QKYMVDPLLIR--PEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQC 268
            +++ +P+ I+  PE      +  +++V L  E K P +  +        +++     Q 
Sbjct: 195 YRFLNEPVEIQINPEKIITERID-QKIVHLGREEKIPYMTNL--------IVNSKEEGQG 245

Query: 269 VIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARG 328
           +IF+NY+     I  +L         +S   DQK RL  L  FK GK R +V TD+A+RG
Sbjct: 246 IIFTNYKANIPKIVHSLRKYGIPITGISSELDQKKRLRLLRDFKSGKYRYMVATDVASRG 305

Query: 329 IDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSL-------- 380
           ID  N+D+V N ++P D   Y+HR+GR  R G +G  I   S    V+   +        
Sbjct: 306 IDVENIDIVYNYDLPQDTENYVHRIGRTARAGRKGKAIGFCSESDYVELEKIEKYLKQKI 365

Query: 381 -MGEINLDHA-FNVGLVPDNLTGD 402
            + E+N ++  F  G  P  + GD
Sbjct: 366 EILEVNEEYIQFPAGEFPPFVGGD 389


>gi|67970471|dbj|BAE01578.1| unnamed protein product [Macaca fascicularis]
          Length = 424

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 125/368 (33%), Positives = 196/368 (53%), Gaps = 21/368 (5%)

Query: 40  GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQ-QPQTIILAP 98
           GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L   PV  Q   +++  
Sbjct: 60  GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL--EPVTGQVSVLVMCH 117

Query: 99  TREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ-----IVVGSPGRIKQMIK 153
           TRE+A QI+        ++ N+ V  F GG  +++ +  ++     IVVG+PGRI  + +
Sbjct: 118 TRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALAR 177

Query: 154 LKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQK 212
            K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++ SAT S +     +K
Sbjct: 178 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRK 237

Query: 213 YMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPFNQCVIF 271
           +M DP+ I  +D T+  L G++Q            L+  ++ +KL  LL    FNQ VIF
Sbjct: 238 FMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKLFDLLDVLEFNQVVIF 289

Query: 272 SNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDA 331
                R   + + L   NF A  +     Q+ RL+    FK  + RILV T+L  RG+D 
Sbjct: 290 VKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDI 349

Query: 332 ANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEINLDHAFN 391
             V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K   ++ ++      N
Sbjct: 350 ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK---ILNDVQDRFEVN 406

Query: 392 VGLVPDNL 399
           +  +PD +
Sbjct: 407 ISELPDEI 414


>gi|410079649|ref|XP_003957405.1| hypothetical protein KAFR_0E01160 [Kazachstania africana CBS 2517]
 gi|372463991|emb|CCF58270.1| hypothetical protein KAFR_0E01160 [Kazachstania africana CBS 2517]
          Length = 405

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 123/383 (32%), Positives = 202/383 (52%), Gaps = 32/383 (8%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           QG+  NGF   S IQ  A   +++G D I Q++SGTGK+  F +  L ++      + Q 
Sbjct: 36  QGIYSNGFEAPSAIQSRAITQIISGRDVIAQAQSGTGKTATFTIGML-QVCNFKSSELQC 94

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP----------VQIVVG 143
           +IL+PTRE+A QI  VV ++G ++    +    G T     K              IV G
Sbjct: 95  LILSPTRELASQINQVVCNIGDYLNVKSMAVVGGKTSASSSKNKNDLNLLRNNKCHIVSG 154

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLI--NTGFVEDITWIYSQLPPMKQMLVVSAT 201
           +PGR+  +IK + +N   V++ ++DEAD+L+  + GF + I  I+++LP   Q++VVSAT
Sbjct: 155 TPGRVLDLIKRQVINTKKVKILVLDEADELLAESLGFKQQIYDIFTKLPKTCQVVVVSAT 214

Query: 202 YSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK----KLV 257
            + D +   +K++ DP+ I  +     L G+KQ               VD+E+     L 
Sbjct: 215 MNKDIIEVTKKFLNDPVKILVKQDQISLEGIKQYHV-----------NVDKEEWKFDTLC 263

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L      NQCVIF N + + + +   L  ANF    + G   Q+ R   ++ F+ G  R
Sbjct: 264 DLYDSLTINQCVIFCNTKKKVDWLSSKLLQANFSVVSMHGDMKQEERDKIMNDFRSGHSR 323

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L++TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G+ I  V+ + +   
Sbjct: 324 VLISTDVWARGIDVQQVSLVINYDLPENMENYIHRIGRSGRFGRKGVAINFVTKDDV--- 380

Query: 378 HSLMGEINLDHAFNVGLVPDNLT 400
             L+ +I   +   +  +P +L+
Sbjct: 381 -KLLKQIERFYRIKIKAMPADLS 402


>gi|296132950|ref|YP_003640197.1| DEAD/DEAH box helicase [Thermincola potens JR]
 gi|296031528|gb|ADG82296.1| DEAD/DEAH box helicase domain protein [Thermincola potens JR]
          Length = 529

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 187/349 (53%), Gaps = 14/349 (4%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           + + I Q ++E GF + +PIQ  A P +LNG+D I Q+++GTGK+  F +  L KL    
Sbjct: 12  LSRRILQAVKEMGFEEPTPIQAEAIPVLLNGHDVIGQAQTGTGKTAAFGIPILEKL-NPR 70

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERP----KRPVQIVVG 143
            +  Q +++ PTRE+A+Q+ + +  +G   K++      GG  ++R     KR VQ+VVG
Sbjct: 71  YRAVQALVITPTRELAIQVAEEIMKLGK-FKDVRTLAVYGGQSIDRQIGALKRGVQVVVG 129

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+   I    L +  +++ ++DEAD++++ GF++DI  I  + P  +Q L+ SAT  
Sbjct: 130 TPGRLLDHINRGTLRLQHLKMLVLDEADEMLDMGFIDDIEAIIKETPETRQTLLFSATMP 189

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQT 263
           H+     +KY+ +P L+        +  ++Q+           +R   + + L ++L   
Sbjct: 190 HEIQQLARKYLKNPRLVAVSKDELTVPSIEQVYY--------EVREKTKLESLCRVLETI 241

Query: 264 PFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
                +IF   +   + +  +L    + AE L G   Q  R   +  FK G+V  LV TD
Sbjct: 242 DVTLAIIFCKTKRGVDELVASLETRGYQAEGLHGDLTQAQRNKVMRKFKNGQVDYLVATD 301

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           +AARG+D  NV  VIN +IP D   Y+HR+GR GR G  G  IT +  E
Sbjct: 302 VAARGLDIENVSHVINYDIPQDPEVYVHRIGRTGRAGRSGKAITFIVPE 350


>gi|78779495|ref|YP_397607.1| DEAD/DEAH box helicase-like [Prochlorococcus marinus str. MIT 9312]
 gi|78712994|gb|ABB50171.1| ATP-dependent RNA helicase CsdA [Prochlorococcus marinus str. MIT
           9312]
          Length = 593

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/347 (34%), Positives = 178/347 (51%), Gaps = 21/347 (6%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQP 91
           I   L   G+   +PIQ AA P ++ G D + Q+++GTGK+  F +  + KL        
Sbjct: 62  ILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLADNKELNA 121

Query: 92  QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGR 147
           + +++ PTRE+A Q+ +  +S  +   N       GGT    Q+   KR V +VVG+PGR
Sbjct: 122 KVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQIYALKRKVDVVVGTPGR 181

Query: 148 IKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNL 207
           I   I+     ++S+   ++DEAD+++N GF+EDI WI  QLP  KQM++ SAT  ++  
Sbjct: 182 IMDHIRQGTFKVNSINCLVLDEADEMLNMGFLEDIEWIIDQLPKNKQMVLFSATMPNEIR 241

Query: 208 ATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPF 265
              +KY+ DP  +LI+          VK+   LI +       YV    KL  L      
Sbjct: 242 NIAKKYLNDPAEILIK---------SVKKETQLISQ----KFLYVQRHHKLDALKRILEL 288

Query: 266 NQ--CVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTD 323
           N    +IF   +L    I E L N       L+G   Q  R  ++D  K+G + ILV TD
Sbjct: 289 NNEGVIIFVRTKLLTTSIAEALENLGHSVAVLNGDIPQNQRENTVDRLKKGFIDILVATD 348

Query: 324 LAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
           +AARG+D   + LV+N + P D  TY HR+GR GR G  G  I  V+
Sbjct: 349 VAARGLDVERIKLVVNYDFPFDKETYTHRIGRTGRAGRSGEAILFVN 395


>gi|410917396|ref|XP_003972172.1| PREDICTED: ATP-dependent RNA helicase DDX39A-like, partial
           [Takifugu rubripes]
          Length = 433

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 120/361 (33%), Positives = 197/361 (54%), Gaps = 18/361 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + E GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L ++ 
Sbjct: 48  DFLLKPELLRAIVECGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQI- 106

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++  + V  F GG  + + +  ++    
Sbjct: 107 -EPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVSVFFGGLAIRKDEEVLKKNCP 165

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            I+VG+PGRI+ +I  K L + + + F++DE DK++      +D+  I+   P  KQ+++
Sbjct: 166 HIIVGTPGRIRALILQKSLRLKNSKHFVLDECDKMLEQRDMRKDVQDIFRMTPHEKQVMM 225

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATRPLL-GVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +++M DP+ +  +D T+ +L G++Q       CK   ++ V++ +K+
Sbjct: 226 FSATLSKEVRPVCRRFMQDPMEVFVDDETKLILHGMRQYY-----CK---VKEVEKNRKI 277

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ +IF     R   + + L    F    +     Q+ R+A    FK  + 
Sbjct: 278 FDLLDVLEFNQVLIFVKTVQRCIALSQLLVEQKFPTTAIHRGMAQEERIARFQQFKNFQQ 337

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILVTT+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E   K
Sbjct: 338 RILVTTNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEKDAK 397

Query: 377 F 377
           F
Sbjct: 398 F 398


>gi|326505420|dbj|BAJ95381.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522769|dbj|BAJ88430.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 524

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/370 (34%), Positives = 192/370 (51%), Gaps = 22/370 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 140 RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 198

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G ++ N+ V    GGT
Sbjct: 199 GKTAAFCIPALEK-IDPEKNAIQVVILVPTRELALQTSQVCKELGKYL-NIEVMVSTGGT 256

Query: 130 Q----VERPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
                + R  +PV ++ G+PGRI  + K     ++   + IMDEADKL+   F   +  +
Sbjct: 257 SLKDDIMRLYQPVHLLAGTPGRILDLTKKGICMLNECSMLIMDEADKLLAPEFQPSVEQL 316

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+        QKY+  P +I   D    L G+ Q  A        
Sbjct: 317 IRYLPASRQLLLFSATFPVTVKDFKQKYLPRPYVINLMDELT-LKGITQYYA-------- 367

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 368 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 424

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 425 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHL 484

Query: 363 GLVITIVSAE 372
           GL + +++ E
Sbjct: 485 GLAVNLITYE 494


>gi|430812637|emb|CCJ29938.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 403

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/355 (35%), Positives = 197/355 (55%), Gaps = 26/355 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNG------YDAIVQSKSGTGKSIVF 75
           FE   L E  +R G+   G+   S +Q  A   ++ G       D I Q++SGTGK+  F
Sbjct: 62  FEEMNLKEDLLR-GIYSYGYESPSAVQSRAIVQIVKGRVLISNVDVIAQAQSGTGKTATF 120

Query: 76  VVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPK 135
            ++ L ++I   V++ Q ++L+PTRE+AVQI +V+ ++G ++ N+     IGGT +    
Sbjct: 121 SISIL-QVIDTAVRETQALVLSPTRELAVQIQNVLLALGQYL-NVQSHACIGGTNIGEDI 178

Query: 136 RPV----QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPP 191
           R +     ++ G+PGR+  MI+ K L   ++++ ++DEAD+L+N GF E I  +Y  LPP
Sbjct: 179 RRLDYGQHVISGTPGRVADMIRRKNLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPP 238

Query: 192 MKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVD 251
             Q++VVSAT  +D L    K+M DP+ I  +     L G+KQ    + +          
Sbjct: 239 GTQVVVVSATLPYDVLELTTKFMTDPVRILVKRDELTLDGLKQYFIAVEK---------- 288

Query: 252 EEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           EE K   L  L       Q VIF N + + + + E +  ANF +  + G   QK R A +
Sbjct: 289 EEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLAEKMREANFTSLSMHGDMPQKERDAIM 348

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRG 363
             F++G  R+L+ TD+ ARGID   V LVIN ++P +   Y+HR+GR+GR+G +G
Sbjct: 349 SEFRQGNSRVLLCTDIWARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRKG 403


>gi|359796404|ref|ZP_09299004.1| DEAD/DEAH box helicase family protein, partial [Achromobacter
           arsenitoxydans SY8]
 gi|359365677|gb|EHK67374.1| DEAD/DEAH box helicase family protein, partial [Achromobacter
           arsenitoxydans SY8]
          Length = 530

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 122/408 (29%), Positives = 209/408 (51%), Gaps = 29/408 (7%)

Query: 22  FENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALN 81
           FEN + +   +   +QE GF   + +Q AA P  L G+D +V S++G+GK+  F++ AL+
Sbjct: 3   FEN-LGLAPALLSAVQEAGFTAPTAVQAAAIPQALAGHDLMVSSQTGSGKTAAFMLPALH 61

Query: 82  KLIKLPVQQP---QTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGG----TQVERP 134
           ++ ++P  +    Q ++L PTRE+A+Q+TD   + G  + +L     +GG     Q++  
Sbjct: 62  RIAQMPANKGVGVQVLVLTPTRELALQVTDATATYGRKLADLRTATVVGGMPYGAQLKAL 121

Query: 135 KRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQ 194
            R V ++V +PGR+   ++   + +++V   ++DEAD++++ GF+EDI  I  +LP  +Q
Sbjct: 122 SRRVDVLVATPGRLIDHLQSGRVKLNTVHTLVLDEADRMLDMGFIEDIETIVERLPEGRQ 181

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK 254
            L+ SAT          + M +P  I    A      + Q           SL Y D+  
Sbjct: 182 TLLFSATLDGTVAKLAARMMREPQRIEIAGAKEKHSNITQ-----------SLLYADDAS 230

Query: 255 KLVQLLSQ----TPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDS 310
             +QLL         +Q ++F++ +   + + + LA+  F A  L G  +Q+ R  +L  
Sbjct: 231 HKMQLLDHVLRDASLDQAIVFTSTKRGADDLADRLADQGFAAAALHGDMNQRQRTRTLSQ 290

Query: 311 FKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS 370
            +RG++RILV TD+AARGID   +   +N ++P  A  Y+HR+GR GR G  GL  T+ +
Sbjct: 291 LQRGQLRILVATDVAARGIDVQGISHAVNFDLPMQAEDYVHRIGRTGRAGRNGLAFTLAT 350

Query: 371 AESLVKFHSLMGEINLDHAFNVGLVPDNLTGDQINWTQRVQTLLAKPL 418
                K         ++H     + P+ + G +   T R  T   KP 
Sbjct: 351 HSERHKVR------RIEHYIGQSITPEVIAGLEPKRTPRPATGGGKPF 392


>gi|30585031|gb|AAP36788.1| Homo sapiens HLA-B associated transcript 1 [synthetic construct]
 gi|60654019|gb|AAX29702.1| HLA-B associated transcript 1 [synthetic construct]
 gi|60654021|gb|AAX29703.1| HLA-B associated transcript 1 [synthetic construct]
          Length = 429

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 108 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 279 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 339 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 398

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 399 ---ILNDVQDRFEVNISELPDEI 418


>gi|24375277|ref|NP_719320.1| ATP-dependent RNA helicase RhlE [Shewanella oneidensis MR-1]
 gi|24350080|gb|AAN56764.1| ATP-dependent RNA helicase RhlE [Shewanella oneidensis MR-1]
          Length = 535

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 194/355 (54%), Gaps = 18/355 (5%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIK-- 85
           +  P+++ + E G+   SPIQ  A P VL G D +  +++GTGK+  F +  L  L K  
Sbjct: 8   LSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLAKGH 67

Query: 86  -LPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
                Q + ++L PTRE+A Q+ + V + G ++  L      GG     Q+ + +  V +
Sbjct: 68  KAKSGQTRALVLTPTRELAAQVGESVETYGKYLP-LRSAVVFGGVPINPQINKLRHGVDV 126

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           +V +PGR+  +++   +  + + + ++DEAD++++ GF+ DI  I + LP  +Q L+ SA
Sbjct: 127 LVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSA 186

Query: 201 TYSHDNLATLQKYMVD-PLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQL 259
           T+S D +  L K +V+ P+ I           VKQ +  + + +  +L        L+QL
Sbjct: 187 TFS-DEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKSAL--------LIQL 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           + Q  + Q ++FS  +     + ++L  A   A  + G + Q AR  +L  FK G+VR+L
Sbjct: 238 IKQENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESL 374
           V TD+AARG+D   +  V+N ++P+    Y+HR+GR GR G  G  +++VS+E +
Sbjct: 298 VATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEI 352


>gi|167769539|ref|ZP_02441592.1| hypothetical protein ANACOL_00873 [Anaerotruncus colihominis DSM
           17241]
 gi|167668507|gb|EDS12637.1| DEAD/DEAH box helicase [Anaerotruncus colihominis DSM 17241]
          Length = 572

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 113/348 (32%), Positives = 189/348 (54%), Gaps = 12/348 (3%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D+ +   + Q + +  + + + IQ  A P ++ G D I +S +GTGK+  F + A+ + I
Sbjct: 8   DIGLSPELVQAVSDMNYTQATGIQAQAIPLLMQGADVIGRSSTGTGKTAAFGIPAVER-I 66

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVE---RPKRPVQIV 141
           +  ++ PQ ++L+PTRE+A+QI D +R    +   + V    GG  ++   R  R   IV
Sbjct: 67  ESGLKAPQVLVLSPTRELAMQIADEMRKFAKYKPGVCVAAVYGGAPMDAQIRALRAANIV 126

Query: 142 VGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSAT 201
           +G+PGR+   ++   L +D +R  ++DEAD+++N GF++DI  I ++ P  +Q ++ SAT
Sbjct: 127 IGTPGRVMDHMRRHTLRLDDLRTVVLDEADEMLNMGFLDDIQTILAETPDTRQTVLFSAT 186

Query: 202 YSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLS 261
                L    K++ DP  +      R +  V+Q    +P+      R +D    L+Q   
Sbjct: 187 MPPAILKITDKFLHDPQTVDIRTGQRTIAAVEQFFYRVPQA-----RKMDALNLLLQY-- 239

Query: 262 QTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVT 321
             P  + V+F N +   + + E L++  F A  + G   Q  R   + SF+ GK RILV 
Sbjct: 240 HDP-KRAVVFCNTKAMVDSLTEYLSDHGFRALGIHGDMKQAGRTQVMQSFRDGKTRILVA 298

Query: 322 TDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
           TD+AARGID  N++ V N +IP +   Y+HR+GR GR G  G+  T+V
Sbjct: 299 TDVAARGIDVENIEAVFNFDIPQEFEHYIHRIGRTGRAGRTGMSHTLV 346


>gi|284035184|ref|YP_003385114.1| DEAD/DEAH box helicase [Spirosoma linguale DSM 74]
 gi|283814477|gb|ADB36315.1| DEAD/DEAH box helicase domain protein [Spirosoma linguale DSM 74]
          Length = 643

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 118/364 (32%), Positives = 202/364 (55%), Gaps = 13/364 (3%)

Query: 21  LFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAAL 80
           L  + + I   + Q + + GF+  SPIQ  A P +L+G D I Q+++GTGK+  F + AL
Sbjct: 31  LLFSSLAISPELLQAVTDMGFISPSPIQAEAIPPILDGRDVIGQAQTGTGKTAAFGIPAL 90

Query: 81  NKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRP--- 137
           + LI +  +  QT+IL PTRE+A+Q+ + ++ +  + + + ++   GG  +ER  R    
Sbjct: 91  D-LIDVQDRSVQTLILCPTRELALQVAEEIKKLAKYKRGIRIEAIYGGDSIERQIRSLKS 149

Query: 138 -VQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQML 196
            V IV+G+PGR+   ++   L +++V++ I+DEAD++++ GF EDI  I  ++P  +Q +
Sbjct: 150 GVHIVIGTPGRVMDHMERNTLKLNNVKMMILDEADEMLDMGFREDIESILEEMPEERQTI 209

Query: 197 VVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL 256
           + SAT S   +   QK+  DP+L++        + ++Q+     E K+ +     + + +
Sbjct: 210 LFSATMSKPIMQITQKFQKDPVLVKVVKKELTNVNIEQVYF---EVKSKA-----KVEVM 261

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
            +L+        ++F N + + + I E+L    + AE L G   Q  R   +  F+ G  
Sbjct: 262 CRLIDMYDLKLLLVFCNTKRKVDEIVEDLQIRGYQAEGLHGDLRQAQRNNVMSKFRAGTT 321

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
            ILV TD+AARGID  +VD VIN +IP D   Y+HR+GR GR G  G   + V  +   +
Sbjct: 322 NILVATDVAARGIDVDDVDAVINFDIPLDEEYYVHRIGRTGRAGKSGRAFSFVGRDEKYR 381

Query: 377 FHSL 380
           F  +
Sbjct: 382 FREI 385


>gi|115447545|ref|NP_001047552.1| Os02g0641800 [Oryza sativa Japonica Group]
 gi|49388094|dbj|BAD25227.1| putative RNA helicase [Oryza sativa Japonica Group]
 gi|113537083|dbj|BAF09466.1| Os02g0641800 [Oryza sativa Japonica Group]
 gi|218191254|gb|EEC73681.1| hypothetical protein OsI_08237 [Oryza sativa Indica Group]
          Length = 483

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/382 (33%), Positives = 197/382 (51%), Gaps = 22/382 (5%)

Query: 10  RTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGT 69
           RT+DV +     FE D  +++ +  G+ E GF + SPIQ  + P  L G D + ++K+GT
Sbjct: 99  RTEDVTATKGNEFE-DYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 157

Query: 70  GKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT 129
           GK+  F + AL K I       Q +IL PTRE+A+Q + V + +G H+K + V    GGT
Sbjct: 158 GKTAAFCIPALEK-IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGT 215

Query: 130 QVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWI 185
            ++    R  +PV ++VG+PGRI  + K     +    + IMDEADKL++  F   +  +
Sbjct: 216 SLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQL 275

Query: 186 YSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNP 245
              LP  +Q+L+ SAT+         KY+  P +I   D    L G+ Q  A        
Sbjct: 276 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELT-LKGITQFYA-------- 326

Query: 246 SLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQK 302
              +V+E +K   L  L S+   NQ +IF N   R E++ + +    +   Y+     Q 
Sbjct: 327 ---FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQD 383

Query: 303 ARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTR 362
            R      F+ G  R LV TDL  RGID   V++VIN + P  A TYLHR+GR+GR+G  
Sbjct: 384 HRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHL 443

Query: 363 GLVITIVSAESLVKFHSLMGEI 384
           GL + +++ E     + +  E+
Sbjct: 444 GLAVNLITYEDRFNLYRIEQEL 465


>gi|59713334|ref|YP_206109.1| RNA helicase [Vibrio fischeri ES114]
 gi|59481582|gb|AAW87221.1| RNA helicase [Vibrio fischeri ES114]
          Length = 500

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 204/384 (53%), Gaps = 26/384 (6%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           +  PI + ++E G+   SPIQ+ A P V+ G D +  +++GTGK+  F +  L +L   P
Sbjct: 8   LSAPILKAVEEQGYSTPSPIQLQAIPAVIEGKDVMAAAQTGTGKTAGFTLPLLERLSNGP 67

Query: 88  ---VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHV--DYFIGGT----QVERPKRPV 138
                Q + ++L PTRE+A Q+ +   SV  + KNL +  D   GG     Q++R +R V
Sbjct: 68  KRKFNQVRALVLTPTRELAAQVHE---SVEKYSKNLPLTSDVVFGGVKVNPQMQRLRRGV 124

Query: 139 QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVV 198
            ++V +PGR+  +     +  D + + ++DEAD++++ GF+ DI  I ++LP  +Q L+ 
Sbjct: 125 DVLVATPGRLLDLANQNAIKFDQLEILVLDEADRMLDMGFIHDIKKILAKLPKNRQNLLF 184

Query: 199 SATYSHDNLATLQKYMV-DPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT+S D +  L K +V DP+ I           V+Q V ++ + + P        K L 
Sbjct: 185 SATFS-DEIRQLAKGLVKDPVEISVAKRNTTAETVEQSVYVMDKGRKP--------KVLT 235

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
           +L+    + Q ++FS  +     + + L      A  + G + Q AR  +L +FK G+VR
Sbjct: 236 KLIKDNDWKQVLVFSKTKHGANRLAKTLEEKGVSAAAIHGNKSQGARTKALANFKSGQVR 295

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVS---AESL 374
           +LV TD+AARG+D   +  VIN+++P     Y+HR+GR GR G  G  I+ VS   A+ L
Sbjct: 296 VLVATDIAARGLDIEQLPQVINVDLPKVPEDYVHRIGRTGRAGATGKAISFVSEDEAKEL 355

Query: 375 VKFHSLMGEINLDHAFNVGLVPDN 398
                L+ ++   H    G  P N
Sbjct: 356 FAIERLIQKVLPRHVLE-GFEPVN 378


>gi|50547377|ref|XP_501158.1| YALI0B20922p [Yarrowia lipolytica]
 gi|74660087|sp|Q6CDV4.1|IF4A_YARLI RecName: Full=ATP-dependent RNA helicase eIF4A; AltName:
           Full=Eukaryotic initiation factor 4A; Short=eIF-4A;
           AltName: Full=Translation initiation factor 1
 gi|49647024|emb|CAG83411.1| YALI0B20922p [Yarrowia lipolytica CLIB122]
          Length = 395

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 213/386 (55%), Gaps = 29/386 (7%)

Query: 24  NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           +D+ ++  + +G+   GF   S IQ  A   V+ G D + Q++SGTGK+  F ++AL   
Sbjct: 25  DDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISALQN- 83

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
           I   +++PQ +I+APTRE+A QI  VV + G ++K +     IGGT V    R +Q    
Sbjct: 84  IDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMK-IECHACIGGTSVAEDIRVIQEGVH 142

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           ++VG+PGRI  MI+ + L  D +++FI+DEAD++++  F + I  I++ LP   Q +++S
Sbjct: 143 VIVGTPGRIHDMIERRILKTDLIKMFILDEADEMLSREFKDPIYDIFTTLPETTQTVLLS 202

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---- 255
           AT   + L    K+M DP+ I  +     L G+KQ              Y+D E++    
Sbjct: 203 ATMPAEVLDITGKFMRDPVRILVKKDELTLEGIKQF-------------YIDVEQESYKF 249

Query: 256 --LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
             L  L      +Q VIF N + + + + + L  A+F    + G  +Q  R   + +F+ 
Sbjct: 250 EVLCDLYETINVSQAVIFCNTRRKVDYLTQALTEADFTVSSMHGETEQSQRDVIMKAFRT 309

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           G  RIL+TTDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V++E 
Sbjct: 310 GSSRILITTDLLARGIDVQQVSLVINFDLPSNRENYIHRIGRGGRFGRKGVAINFVTSED 369

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNL 399
               H ++ E+   ++  +  +P N+
Sbjct: 370 ----HGMLKELERFYSTEIVEMPTNI 391


>gi|238484739|ref|XP_002373608.1| eukaryotic translation initiation factor 4, putative [Aspergillus
           flavus NRRL3357]
 gi|220701658|gb|EED57996.1| eukaryotic translation initiation factor 4, putative [Aspergillus
           flavus NRRL3357]
          Length = 439

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 139/402 (34%), Positives = 216/402 (53%), Gaps = 27/402 (6%)

Query: 25  DVLIEKP-IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL 83
           D +  KP + +G+   GF + S IQ  A   ++ G D I Q++SGTGK+  F ++AL KL
Sbjct: 27  DAMELKPELLRGVYAYGFERPSAIQQRAIKPIIKGSDVIAQAQSGTGKTATFSISALQKL 86

Query: 84  IKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPV----Q 139
               V+  Q +ILAPTRE+A QI  VV ++G  + N+     IGGT V    + +    +
Sbjct: 87  -DPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NITCHACIGGTAVREDMKALGEGPE 144

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVS 199
           +VVG+PGR+  MI+ + L  D ++ FI+DEAD++++ GF E I  I+  LP   Q++++S
Sbjct: 145 VVVGTPGRVHDMIQRRVLKTDHLKQFILDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLS 204

Query: 200 ATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKL--- 256
           AT   D L    K+M DP+ I  +     L G+KQ    + +          EE KL   
Sbjct: 205 ATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEK----------EEWKLDTL 254

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + L   +F    + G  +Q  R   +  F+ G  
Sbjct: 255 SDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSS 314

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           R+L+ TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  V+A+ +  
Sbjct: 315 RVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDV-- 372

Query: 377 FHSLMGEINLDHAFNVGLVPDNLTG---DQINWTQRVQTLLA 415
              +M EI   ++  +  +P N+ G    Q+N   R+  L+A
Sbjct: 373 --RMMREIEQFYSTQIEEMPMNVAGKCLSQVNLLSRLWMLIA 412


>gi|170782265|ref|YP_001710598.1| ATP-dependent RNA helicase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156834|emb|CAQ02001.1| putative ATP-dependent RNA helicase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 520

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 117/353 (33%), Positives = 196/353 (55%), Gaps = 9/353 (2%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           I++ + Q L ++G ++  PIQ    P  L+G D I Q+K+GTGK+  F +  + +L   P
Sbjct: 8   IDEDMVQALADHGILEPFPIQEQTIPLALSGQDIIGQAKTGTGKTFGFGLPLIQRLGLTP 67

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT---QVERPKRPVQIVVGS 144
               Q +++ PTRE+AVQ+T+ ++    H     V  + G     Q+E+ K   QIVVG+
Sbjct: 68  EPGVQALVVVPTRELAVQVTEDLQIATKHRATTVVSIYGGKAYEGQIEQLKAGAQIVVGT 127

Query: 145 PGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSH 204
           PGR+  ++  + L++  VR  ++DEADK+++ GF+ DI  +++Q P ++  ++ SAT   
Sbjct: 128 PGRLLDLVGQRLLSLKYVREMVLDEADKMLDLGFLSDIEKLFAQTPAVRHTMLFSATMPG 187

Query: 205 DNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTP 264
             +A  +++M  P+ IR  D    L+    +  L+    N     +D+++ + ++L    
Sbjct: 188 PIVALARRFMTKPIHIRATDPDEGLMQA-NIRHLVYRAHN-----MDKDEVIGRILQAEG 241

Query: 265 FNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDL 324
             + VIF+  +     + E L +  F A  + G  +Q+ R  ++ +FK GK  IL+ TD+
Sbjct: 242 RGKTVIFTRTKRAAARLVEELNDRGFNAAAVHGDLNQEQRERAMAAFKAGKKDILIATDV 301

Query: 325 AARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           AARGID  +V  VIN  IP D   YLHR+GR GR G  G+ +T V  + L K+
Sbjct: 302 AARGIDVLDVTHVINHTIPEDDKAYLHRVGRTGRAGKTGIAVTFVDWDDLHKW 354


>gi|397523222|ref|XP_003831640.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 3 [Pan paniscus]
          Length = 443

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 64  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 122

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 123 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 181

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 182 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 241

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 242 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 293

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 294 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 353

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 354 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 413

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 414 ---ILNDVQDRFEVNISELPDEI 433


>gi|390461400|ref|XP_002746375.2| PREDICTED: LOW QUALITY PROTEIN: spliceosome RNA helicase DDX39B
           [Callithrix jacchus]
          Length = 422

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 108 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 279 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 339 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 398

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 399 ---ILNDVQDRFEVNISELPDEI 418


>gi|348590558|ref|YP_004875020.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
 gi|347974462|gb|AEP36997.1| ATP-dependent RNA helicase [Taylorella asinigenitalis MCE3]
          Length = 444

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 208/373 (55%), Gaps = 39/373 (10%)

Query: 32  IRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI------K 85
           I + +   G++  +PIQ  +FP +L G D +  +++GTGK+  F +  LN++I       
Sbjct: 15  ILENISNTGYLHATPIQALSFPPILEGRDVMGAAQTGTGKTAAFTLPLLNRMIPKASFST 74

Query: 86  LPVQQP-QTIILAPTREIAVQITDVVRSVGAHVKNLHV--DYFIGGTQVERPK----RPV 138
            P + P + ++L PTRE+A QI+   ++V A+   L +      GG      K    R  
Sbjct: 75  SPAKHPVRMLVLTPTRELAEQIS---KNVIAYADGLPLRTSLIYGGVDFNAQKHELMRGA 131

Query: 139 QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVV 198
            IV+ +PGR+   ++ + +N++ V   I+DEAD++++ GF+ D+  I +QLP  +Q L+ 
Sbjct: 132 DIVIATPGRLLDHVEQRTINLNQVEFLILDEADRMLDMGFMLDLLKILAQLPSRRQSLLY 191

Query: 199 SATYSHDNLATL-QKYMVDPLLIRPEDATRPLLGVKQLVALIPEC-KNPSLRYVDEEKKL 256
           SAT+S DN+ +L QK++ DP+ I           + Q +  + E  KN +L Y       
Sbjct: 192 SATFS-DNIRSLAQKFLHDPVEITVASNNSTASTITQEIFSVSEAEKNAALLY------- 243

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLA----NANFGAEYLSGAQDQKARLASLDSFK 312
             LL+   FN  +IFSN +    + C+NL     N +  A+ L G + Q  R  +L+ FK
Sbjct: 244 --LLASRNFNNVIIFSNRK----ITCKNLERYLNNLDLSAQSLHGDKTQSERTKALNLFK 297

Query: 313 RGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA- 371
             K  ILV TD+AARG+D ++VD VIN E+P  +  Y+HR+GR GR G +G+ I++ S+ 
Sbjct: 298 SSKCNILVATDVAARGLDISDVDAVINYELPPTSEDYVHRIGRTGRAGRKGIAISMYSSD 357

Query: 372 --ESLVKFHSLMG 382
             ESL +  +L+G
Sbjct: 358 EKESLHEIETLIG 370


>gi|224285398|gb|ACN40422.1| unknown [Picea sitchensis]
          Length = 428

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 123/356 (34%), Positives = 189/356 (53%), Gaps = 33/356 (9%)

Query: 35  GLQEN--------GFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKL 86
           GLQEN        GF K S IQ         G D I Q++SGTGK+  F    L +L   
Sbjct: 44  GLQENLLRGIYAYGFEKPSAIQQRGIVPFCQGLDVIQQAQSGTGKTATFCSGILQQL-NY 102

Query: 87  PVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVV 142
            V + Q ++LAPTRE+A QI  V+R++G +++ + V   +GGT +    R +Q    +VV
Sbjct: 103 NVPECQALVLAPTRELAQQIEKVMRALGDYLQ-VRVHACVGGTSIREDLRILQAGVHVVV 161

Query: 143 GSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATY 202
           G+PGR+  M++ + L  DS+++F++DEAD++++ GF + I  I+  LP   Q+ V SAT 
Sbjct: 162 GTPGRVYDMLRRRALRPDSIKMFVLDEADEMLSRGFKDQIYDIFQLLPTNLQVGVFSATM 221

Query: 203 SHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------L 256
             + L   +K+M +P+ I  +     L G+KQ              YV+ E++      L
Sbjct: 222 PPEALEITRKFMTNPVRILVKRDELTLEGIKQF-------------YVNVEREDWKLDTL 268

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             L       Q VIF N + + + + + +   +       G  DQ  R   +  F+ G  
Sbjct: 269 CDLYETLAITQSVIFINTRRKVDWLTDQMRARDHTVSATHGDMDQNTRDIIMREFRSGSS 328

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAE 372
           R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  V+ +
Sbjct: 329 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKD 384


>gi|336259825|ref|XP_003344711.1| hypothetical protein SMAC_06365 [Sordaria macrospora k-hell]
 gi|380088867|emb|CCC13147.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 584

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 188/352 (53%), Gaps = 21/352 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D + ++ +  G+ E GF K SPIQ  A P  L G D + ++K+GTGK+  F++ AL K I
Sbjct: 49  DFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFLIPALEK-I 107

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQI 140
              V + Q +IL PTRE+A+Q + V +++G H+  ++V    GGT     + R + PV I
Sbjct: 108 NPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLRDDIVRLQDPVHI 166

Query: 141 VVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSA 200
           VVG+PGRI  +   +  ++    +FIMDEADKL++  F   I  +    P  +Q+++ SA
Sbjct: 167 VVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSQEFTPVIEQLLQFHPKDRQVMLFSA 226

Query: 201 TYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK---LV 257
           T+         K M  P  I   D    L G+ Q  A           +V+E++K   L 
Sbjct: 227 TFPLSVKDFSDKNMTSPYEINLMDELT-LRGITQYYA-----------FVEEKQKVHCLN 274

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L S+   NQ +IF N   R E++ + +    +   Y      Q+AR      F+ G  R
Sbjct: 275 TLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCR 334

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIV 369
            LV +DL  RGID   V++VIN + P +A TYLHR+GR+GRYG  GL I ++
Sbjct: 335 NLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLI 386


>gi|3776021|emb|CAA09211.1| RNA helicase [Arabidopsis thaliana]
          Length = 441

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 122/382 (31%), Positives = 201/382 (52%), Gaps = 29/382 (7%)

Query: 28  IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLP 87
           ++  + +G+   GF K S IQ         G D I Q++SGTGK+  F    L +L  + 
Sbjct: 75  LQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQL-DIS 133

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----IVVG 143
           + Q Q ++LAPTRE+A QI  V+R++G ++  +     +GGT V   +R +Q    +VVG
Sbjct: 134 LVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKAQACVGGTSVREDQRVLQSGVHVVVG 192

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  +++ + L  D++++F++DEAD++++ GF + I  I+  LP   Q+ V SAT  
Sbjct: 193 TPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMP 252

Query: 204 HDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEKK------LV 257
            + L   +K+M  P+ I  +     L G+KQ              YV+ +K+      L 
Sbjct: 253 PEALEITRKFMNKPVRILVKRDELTLEGIKQF-------------YVNVDKEEWKLETLC 299

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            L       Q VIF N + + + + + + + +       G  DQ  R   +  F+ G  R
Sbjct: 300 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 359

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKF 377
           +L+TTDL ARGID   V LVIN ++P     YLHR+GR+GR+G +G+ I  +++E     
Sbjct: 360 VLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSED---- 415

Query: 378 HSLMGEINLDHAFNVGLVPDNL 399
             +M +I   +   V  +P N+
Sbjct: 416 ERMMADIQRFYNVVVEELPSNV 437


>gi|148242659|ref|YP_001227816.1| superfamily II DNA/RNA helicase [Synechococcus sp. RCC307]
 gi|147850969|emb|CAK28463.1| Superfamily II DNA/RNA helicase [Synechococcus sp. RCC307]
          Length = 560

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 121/403 (30%), Positives = 221/403 (54%), Gaps = 26/403 (6%)

Query: 34  QGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLIKLPVQQPQT 93
           + L + G+ + SPIQ AA P ++ G D + Q+++GTGK+  F +  L + I L  + PQ 
Sbjct: 28  EALTKCGYEQPSPIQAAAIPELMLGRDLLGQAQTGTGKTAAFALPLLAR-INLEARHPQV 86

Query: 94  IILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVGSPGRIK 149
           ++LAPTRE+A+Q+++  +   +    LHV    GG+    Q+ + +R V +VVG+PGR+ 
Sbjct: 87  LVLAPTRELAIQVSEAFQRYASCTPGLHVLPLYGGSDFRDQIHKLRRGVHVVVGTPGRVM 146

Query: 150 QMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYSHDNLAT 209
             ++   LN+  +   ++DEAD+++  GF++D+ W+  QLP  +Q+++ SAT   +    
Sbjct: 147 DHMRQGTLNVSQLETLVLDEADEMLRMGFIDDVKWVLEQLPSERQVVLFSATMPPEIKRI 206

Query: 210 LQKYMVDP--LLIRPE--DATRPLLGVKQLVALIPECKNPSLRYVDEEKKLVQLLSQTPF 265
            Q+++ +P  ++IR +  DA+R    ++Q   L+P  +  S         L+++L     
Sbjct: 207 SQQHLQNPAEVIIRTQKADASR----IRQRHILLPHQQKLS--------ALLRVLEAHGP 254

Query: 266 NQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRILVTTDLA 325
              +IF+  +     + E L         L+G   Q  R  +++  K+G++ +LV TD+A
Sbjct: 255 GGVIIFARTKAVTVTVAEALEAEGIACSVLNGDVPQSLRERTIERLKQGRIDVLVATDVA 314

Query: 326 ARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVKFHSLMGEIN 385
           ARG+D   + LV+N + P D+  Y+HR+GR GR G +G  I  +S       HSL  E  
Sbjct: 315 ARGLDVDRIGLVVNYDAPFDSEAYVHRIGRTGRAGRQGDAILFLSYRERRLLHSL--ERA 372

Query: 386 LDHAFNVGLVPDNLTGDQI---NWTQRVQTLLAKPLDQAQERE 425
           +  + +   VP +   +Q    N  Q++  L+++P+ + +++E
Sbjct: 373 VGSSIDAMDVPSDAEINQQRLDNLQQQLSDLVSEPVPEDRQQE 415


>gi|297807157|ref|XP_002871462.1| hypothetical protein ARALYDRAFT_487950 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317299|gb|EFH47721.1| hypothetical protein ARALYDRAFT_487950 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 427

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/356 (35%), Positives = 193/356 (54%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L ++ 
Sbjct: 50  DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIE 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
             P  Q   ++L  TRE+A QI +       ++ +  V  F GG  ++  K  ++     
Sbjct: 110 PSP-GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPH 168

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGR+  + + K L++ +VR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 169 IVVGTPGRVLALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 228

Query: 199 SATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ I  +D A   L G+ Q            L  +++ +KL 
Sbjct: 229 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLSEMEKNRKLN 280

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +     Q+ RL    SFK G  R
Sbjct: 281 DLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKR 340

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   V++VIN ++P  A TYLHR+GRAGR+GT+GL IT V++ S
Sbjct: 341 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASAS 396


>gi|301789323|ref|XP_002930057.1| PREDICTED: spliceosome RNA helicase BAT1-like [Ailuropoda
           melanoleuca]
 gi|410958714|ref|XP_003985959.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Felis catus]
          Length = 428

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 108 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 279 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 339 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 398

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 399 ---ILNDVQDRFEVNISELPDEI 418


>gi|365759628|gb|EHN01407.1| Tif1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|365760050|gb|EHN01798.1| Tif1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
 gi|401841498|gb|EJT43880.1| TIF2-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 395

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 135/377 (35%), Positives = 217/377 (57%), Gaps = 20/377 (5%)

Query: 14  VLSNID-VLFE-NDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGK 71
           +L+N D V+++ +D+ +++ + +G+   GF + S IQ  A   ++ G+D + Q++SGTGK
Sbjct: 13  ILTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGK 72

Query: 72  SIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQ- 130
           +  F +AAL + I   V+ PQ ++LAPTRE+A+QI  VV ++  H+ ++ V   IGGT  
Sbjct: 73  TGTFSIAALQR-IDTSVKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSF 130

Query: 131 VERPK--RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQ 188
           VE  +  R  QIVVG+PGR+   I+ +    D +++FI+DEAD+++++GF E I  I++ 
Sbjct: 131 VEDAEGLRDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTL 190

Query: 189 LPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPECKNPSLR 248
           LPP  Q++++SAT  +D L    K+M +P+ I  +     L G+KQ    + E      +
Sbjct: 191 LPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEE---EDFK 247

Query: 249 YVDEEKKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASL 308
           Y    + L  L       Q VIF N + + E +   L +  F    +     Q+ R   +
Sbjct: 248 Y----ECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRDDKFTVSAIYSDLPQQERDTIM 303

Query: 309 DSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITI 368
             F+ G  RIL++TDL ARGID   V LVIN ++P +   Y+HR+GR GR+G +G+ I  
Sbjct: 304 KEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINF 363

Query: 369 VSAE------SLVKFHS 379
           V+ E       L KF+S
Sbjct: 364 VTNEDVGAMRELEKFYS 380


>gi|118482305|gb|ABK93079.1| unknown [Populus trichocarpa]
          Length = 428

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 191/356 (53%), Gaps = 16/356 (4%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + ++GF   S +Q    P  + G D I Q+KSG GK+ VFV++ L + I
Sbjct: 51  DFLLKPELLRSIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ-I 109

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ----- 139
           +    Q   ++L  TRE+A QI         ++ +  V  F GG  ++  K  ++     
Sbjct: 110 EPTSGQVIALVLCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKTHKDLLKNECPH 169

Query: 140 IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLVV 198
           IVVG+PGRI  + + K L++ +VR FI+DE DK++ +     D+  I+   P  KQ+++ 
Sbjct: 170 IVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMF 229

Query: 199 SATYSHDNLATLQKYMVDPLLIRPED-ATRPLLGVKQLVALIPECKNPSLRYVDEEKKLV 257
           SAT S +     +K+M DP+ I  +D A   L G+ Q            L  +++ +KL 
Sbjct: 230 SATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ--------HYIKLTELEKNRKLN 281

Query: 258 QLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVR 317
            LL    FNQ VIF     R   + + L   NF +  +     Q+ RL     FK G  R
Sbjct: 282 DLLGALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLMRYKGFKEGHKR 341

Query: 318 ILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
           ILV TDL  RGID   VD+VIN ++P  A TYLHR+GRAGR+GT+GL IT VS+ S
Sbjct: 342 ILVATDLVGRGIDIERVDIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 397


>gi|281342596|gb|EFB18180.1| hypothetical protein PANDA_020423 [Ailuropoda melanoleuca]
          Length = 425

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 108 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 279 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 339 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 398

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 399 ---ILNDVQDRFEVNISELPDEI 418


>gi|431921583|gb|ELK18937.1| Spliceosome RNA helicase BAT1 [Pteropus alecto]
          Length = 426

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 108 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 279 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 339 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 398

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 399 ---ILNDVQDRFEVNISELPDEI 418


>gi|355748421|gb|EHH52904.1| hypothetical protein EGM_13439 [Macaca fascicularis]
          Length = 426

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 108 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 279 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 339 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 398

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 399 ---ILNDVQDRFEVNISELPDEI 418


>gi|2500521|sp|Q40468.1|IF415_TOBAC RecName: Full=Eukaryotic initiation factor 4A-15; Short=eIF-4A-15;
           AltName: Full=ATP-dependent RNA helicase eIF4A-15
 gi|485945|emb|CAA55739.1| unnamed protein product [Nicotiana tabacum]
          Length = 413

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 123/376 (32%), Positives = 202/376 (53%), Gaps = 27/376 (7%)

Query: 9   ARTKDVLSNIDVLFEN-DVL-IEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSK 66
           A  +D  ++ D ++++ D + +++ + +G+   GF K S IQ         G D I Q++
Sbjct: 26  ADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 85

Query: 67  SGTGKSIVFVVAALNKLIKLPVQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFI 126
           SGTGK+  F    L +L    + + Q ++LAPTRE+A QI  V+R++G ++  + V   +
Sbjct: 86  SGTGKTATFCSGILQQL-AYELLECQALVLAPTRELAQQIEKVMRALGDYL-GVKVTACV 143

Query: 127 GGTQVERPKR----PVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDI 182
           GGT V   +R     V +VVG+PGR+  M++ + L  D +++F++DEAD++++ GF + I
Sbjct: 144 GGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQI 203

Query: 183 TWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLLGVKQLVALIPEC 242
             I+  LPP  Q+ V SAT   + L   +K+M  P+ I  +     L G+KQ        
Sbjct: 204 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF------- 256

Query: 243 KNPSLRYVDEEKK------LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLS 296
                 YV+ +K+      L  L       Q VIF N + + + + + + + +       
Sbjct: 257 ------YVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 310

Query: 297 GAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRA 356
           G  DQ  R   +  F+ G  R+L+TTDL ARGID   V LVIN ++P     YLHR+GR+
Sbjct: 311 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRS 370

Query: 357 GRYGTRGLVITIVSAE 372
           GR+G +G+ I  V+ +
Sbjct: 371 GRFGRKGVAINFVTKD 386


>gi|9790069|ref|NP_062667.1| spliceosome RNA helicase Ddx39b [Mus musculus]
 gi|51592092|ref|NP_579834.2| spliceosome RNA helicase Ddx39b [Rattus norvegicus]
 gi|356995868|ref|NP_001239386.1| spliceosome RNA helicase Ddx39b [Mus musculus]
 gi|61217662|sp|Q9Z1N5.1|DX39B_MOUSE RecName: Full=Spliceosome RNA helicase Ddx39b; AltName: Full=56 kDa
           U2AF65-associated protein; AltName: Full=DEAD box
           protein UAP56; AltName: Full=HLA-B-associated transcript
           1 protein
 gi|61252099|sp|Q63413.3|DX39B_RAT RecName: Full=Spliceosome RNA helicase Ddx39b; AltName: Full=56 kDa
           U2AF65-associated protein; AltName: Full=ATP-dependent
           RNA helicase p47; AltName: Full=DEAD box protein Uap56
 gi|4809332|gb|AAD30177.1|AC007080_3 BAT1 [Mus musculus]
 gi|4235116|gb|AAD13115.1| nuclear RNA helicase Bat1 [Mus musculus]
 gi|15029704|gb|AAH11067.1| HLA-B-associated transcript 1A [Mus musculus]
 gi|17529570|emb|CAC85694.1| putative RNA helicase [Rattus norvegicus]
 gi|22137623|gb|AAH24859.1| HLA-B-associated transcript 1A [Mus musculus]
 gi|26341686|dbj|BAC34505.1| unnamed protein product [Mus musculus]
 gi|26353988|dbj|BAC40624.1| unnamed protein product [Mus musculus]
 gi|32964852|gb|AAP91685.1| HLA-B associated transcript 1 [Mus musculus]
 gi|32964854|gb|AAP91686.1| HLA-B associated transcript 1 [Mus musculus]
 gi|51329823|gb|AAH80243.1| HLA-B associated transcript 1 [Rattus norvegicus]
 gi|149028103|gb|EDL83554.1| HLA-B-associated transcript 1A, isoform CRA_a [Rattus norvegicus]
          Length = 428

 Score =  196 bits (499), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 108 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 279 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 339 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 398

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 399 ---ILNDVQDRFEVNISELPDEI 418


>gi|395215483|ref|ZP_10400949.1| DEAD/DEAH box helicase [Pontibacter sp. BAB1700]
 gi|394455827|gb|EJF10233.1| DEAD/DEAH box helicase [Pontibacter sp. BAB1700]
          Length = 476

 Score =  196 bits (499), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 207/387 (53%), Gaps = 33/387 (8%)

Query: 31  PIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKL---IKLP 87
           PI + LQ  G+ + +PIQ  A P++L G D +  +++GTGK+  F +  L  L       
Sbjct: 11  PILKALQAEGYTQPTPIQEQAIPHLLAGTDVLGCAQTGTGKTAAFAIPVLQMLHNQKNRA 70

Query: 88  VQQPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGT----QVERPKRPVQIVVG 143
               +T+IL PTRE+A+QI +   + G +    H   F GG     QV+  KR V +++ 
Sbjct: 71  SNTIKTLILTPTRELAIQINESFAAYGKNTGVRHTVIF-GGVSQHAQVQTLKRGVDVLIA 129

Query: 144 SPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPMKQMLVVSATYS 203
           +PGR+  +I   ++++  V  F++DEAD++++ GF+ D+  I   LP  +Q L  SAT  
Sbjct: 130 TPGRLLDLIGQGFISLKHVEFFVLDEADRMLDMGFIHDVKRIIPMLPKQRQSLFFSAT-- 187

Query: 204 HDNLATLQKYMVDPLLIRPEDA-TRPLLGVKQLVALIPECKNPSLRYV---DEEKKLVQL 259
              +  + + + D +LI P      P       V+   E    ++ +V   D+ + L  L
Sbjct: 188 ---MPPVIQDLADTILINPVKVEVTP-------VSSTAEKVGQAVYFVEKNDKRELLRHL 237

Query: 260 LSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKVRIL 319
           LS++  ++ ++F+  +   + + ++L  AN  AE + G + Q AR  +L +FK G  R+L
Sbjct: 238 LSESEIDRVLVFTRTKHGADRVAKDLNKANIQAEAIHGNKSQNARQRALSNFKAGSTRVL 297

Query: 320 VTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES------ 373
           V TD+AARGID   +  VIN E+P++  TY+HR+GR GR G  G+ ++    E       
Sbjct: 298 VATDIAARGIDVEELSHVINYELPNEPETYVHRIGRTGRAGNAGIALSFCDEEERYYLRD 357

Query: 374 LVKFHSLMGEINLDHAFNVGLVPDNLT 400
           + K  +   ++N DH F    +P++L+
Sbjct: 358 IQKLINKQIKVNADHPFA---LPEHLS 381


>gi|4758112|ref|NP_004631.1| spliceosome RNA helicase DDX39B [Homo sapiens]
 gi|18375623|ref|NP_542165.1| spliceosome RNA helicase DDX39B [Homo sapiens]
 gi|55742824|ref|NP_001005157.1| spliceosome RNA helicase DDX39B [Sus scrofa]
 gi|114050801|ref|NP_001040608.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
 gi|166429536|ref|NP_001107635.1| spliceosome RNA helicase DDX39B [Pan troglodytes]
 gi|194223324|ref|XP_001917652.1| PREDICTED: v-type proton ATPase subunit G 2 isoform 1 [Equus
           caballus]
 gi|338718573|ref|XP_003363850.1| PREDICTED: v-type proton ATPase subunit G 2 isoform 2 [Equus
           caballus]
 gi|395533821|ref|XP_003768951.1| PREDICTED: spliceosome RNA helicase DDX39B [Sarcophilus harrisii]
 gi|397523218|ref|XP_003831638.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Pan paniscus]
 gi|397523220|ref|XP_003831639.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 2 [Pan paniscus]
 gi|402866418|ref|XP_003897379.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Papio anubis]
 gi|402866420|ref|XP_003897380.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 2 [Papio anubis]
 gi|402866422|ref|XP_003897381.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 3 [Papio anubis]
 gi|426352363|ref|XP_004043682.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 1 [Gorilla
           gorilla gorilla]
 gi|426352365|ref|XP_004043683.1| PREDICTED: spliceosome RNA helicase DDX39B isoform 2 [Gorilla
           gorilla gorilla]
 gi|2500529|sp|Q13838.1|DX39B_HUMAN RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
           U2AF65-associated protein; AltName: Full=ATP-dependent
           RNA helicase p47; AltName: Full=DEAD box protein UAP56;
           AltName: Full=HLA-B-associated transcript 1 protein
 gi|38502870|sp|P60024.1|DX39B_PANTR RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
           U2AF65-associated protein; AltName: Full=DEAD box
           protein UAP56
 gi|47117788|sp|Q29024.2|DX39B_PIG RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
           U2AF65-associated protein; AltName: Full=DEAD box
           protein UAP56
 gi|61217531|sp|Q5RE47.1|DX39B_PONAB RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
           U2AF65-associated protein; AltName: Full=DEAD box
           protein UAP56
 gi|61217533|sp|Q5TM17.1|DX39B_MACMU RecName: Full=Spliceosome RNA helicase DDX39B; AltName: Full=56 kDa
           U2AF65-associated protein; AltName: Full=DEAD box
           protein UAP56
 gi|587146|emb|CAA85523.1| nuclear RNA helicase (DEAD family) [Homo sapiens]
 gi|6624728|emb|CAB63856.1| putative RNA helicase [Sus scrofa]
 gi|12653187|gb|AAH00361.1| HLA-B associated transcript 1 [Homo sapiens]
 gi|15277213|dbj|BAB63306.1| putative ATP-dependent RNA helicase [Homo sapiens]
 gi|15278164|gb|AAH13006.1| HLA-B associated transcript 1 [Homo sapiens]
 gi|18181952|dbj|BAB83886.1| BAT1 [Pan troglodytes]
 gi|27544432|dbj|BAC54953.1| HLA-B associated transcript 1 [Homo sapiens]
 gi|32127769|dbj|BAC78161.1| ATP-dependent RNA helicase [Pan troglodytes]
 gi|32880161|gb|AAP88911.1| HLA-B associated transcript 1 [Homo sapiens]
 gi|55700773|dbj|BAD69728.1| HLA-B associated transcript-1 [Macaca mulatta]
 gi|55726381|emb|CAH89960.1| hypothetical protein [Pongo abelii]
 gi|61362641|gb|AAX42257.1| HLA-B associated transcript 1 [synthetic construct]
 gi|61362649|gb|AAX42258.1| HLA-B associated transcript 1 [synthetic construct]
 gi|86197992|dbj|BAE78637.1| HLA-B associated transcript 1 [Homo sapiens]
 gi|90085292|dbj|BAE91387.1| unnamed protein product [Macaca fascicularis]
 gi|90960864|dbj|BAE92779.1| nuclear RNA helicase [Pan troglodytes]
 gi|90960868|dbj|BAE92782.1| nuclear RNA helicase [Pan troglodytes]
 gi|119623809|gb|EAX03404.1| hCG2005638, isoform CRA_a [Homo sapiens]
 gi|119623812|gb|EAX03407.1| hCG2005638, isoform CRA_a [Homo sapiens]
 gi|119623813|gb|EAX03408.1| hCG2005638, isoform CRA_a [Homo sapiens]
 gi|119623814|gb|EAX03409.1| hCG2005638, isoform CRA_a [Homo sapiens]
 gi|119623815|gb|EAX03410.1| hCG2005638, isoform CRA_a [Homo sapiens]
 gi|119623816|gb|EAX03411.1| hCG2005638, isoform CRA_a [Homo sapiens]
 gi|119623818|gb|EAX03413.1| hCG2005638, isoform CRA_a [Homo sapiens]
 gi|123981956|gb|ABM82807.1| HLA-B associated transcript 1 [synthetic construct]
 gi|123996783|gb|ABM85993.1| HLA-B associated transcript 1 [synthetic construct]
 gi|162138207|gb|ABX82809.1| HLA-B-associated protein 1 [Sus scrofa]
 gi|168985556|emb|CAQ10634.1| HLA-B associated transcript 1 [Homo sapiens]
 gi|261859894|dbj|BAI46469.1| HLA-B associated transcript 1 [synthetic construct]
 gi|266634526|dbj|BAI49420.1| HLA-B associated transcript 1 [Microcebus murinus]
 gi|380783493|gb|AFE63622.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
 gi|380783495|gb|AFE63623.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
 gi|383411769|gb|AFH29098.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
 gi|383411771|gb|AFH29099.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
 gi|384949414|gb|AFI38312.1| spliceosome RNA helicase DDX39B [Macaca mulatta]
 gi|410214944|gb|JAA04691.1| HLA-B associated transcript 1 [Pan troglodytes]
 gi|410214946|gb|JAA04692.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Pan troglodytes]
 gi|410247506|gb|JAA11720.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Pan troglodytes]
 gi|410247508|gb|JAA11721.1| HLA-B associated transcript 1 [Pan troglodytes]
 gi|410340525|gb|JAA39209.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Pan troglodytes]
 gi|410340527|gb|JAA39210.1| HLA-B associated transcript 1 [Pan troglodytes]
          Length = 428

 Score =  196 bits (498), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 127/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 49  DFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL- 107

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++ N+ V  F GG  +++ +  ++    
Sbjct: 108 -EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGRI  + + K LN+  ++ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S +     +K+M DP+ I  +D T+  L G++Q            L+  ++ +KL
Sbjct: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYV--------KLKDNEKNRKL 278

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +     Q+ RL+    FK  + 
Sbjct: 279 FDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQR 338

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++  N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 339 RILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAK 398

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
              ++ ++      N+  +PD +
Sbjct: 399 ---ILNDVQDRFEVNISELPDEI 418


>gi|403414604|emb|CCM01304.1| predicted protein [Fibroporia radiculosa]
          Length = 440

 Score =  196 bits (498), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/360 (35%), Positives = 198/360 (55%), Gaps = 22/360 (6%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 61  DFLLKPELLRAISDLGFEHPSEVQQECIPQAVLGMDVLCQAKSGHGKTAVFVLATLQQL- 119

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQV--------ERPK 135
             PV  +   ++L  TRE+A QI +       ++ ++ V  F GGT V        ++ K
Sbjct: 120 -EPVNGEVSVLVLCHTRELAFQIKNEYTRFAKYMPDVRVSTFYGGTPVAKDAELLRDKTK 178

Query: 136 RPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLI-NTGFVEDITWIYSQLPPMKQ 194
            P  IVV +PGR+  + + K L+   V+ FI+DE DK++       D+  I+   P  KQ
Sbjct: 179 CP-HIVVATPGRLNALTRDKVLDASKVKHFILDECDKMLEQLDMRRDVQEIFRATPHHKQ 237

Query: 195 MLVVSATYSHDNLATLQKYMVDPLLIRPEDATRPLL-GVKQLVALIPECKNPSLRYVDEE 253
           +++ SAT + +   T +K+M +PL I  +D T+  L G++Q  A + E        V + 
Sbjct: 238 VMMFSATLAKEIRVTCKKFMANPLEIFVDDETKLTLHGLRQHYAKLEE--------VAKN 289

Query: 254 KKLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKR 313
           +KL +LL    FNQ VIF     R   + + L + NF +  +     Q+ R+    +FK 
Sbjct: 290 RKLNELLDTLEFNQVVIFVKSVARAIELDKLLVSCNFPSISIHSGLSQEERINRYTAFKA 349

Query: 314 GKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAES 373
            + RILV TD+  RGID   V++VIN + P DA +YLHR+GRAGR+GT+GL IT VS+ES
Sbjct: 350 FEKRILVATDIFGRGIDVERVNIVINYDCPPDADSYLHRVGRAGRFGTKGLAITFVSSES 409


>gi|198430623|ref|XP_002127634.1| PREDICTED: similar to HLA-B associated transcript 1 [Ciona
           intestinalis]
          Length = 424

 Score =  196 bits (498), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 128/383 (33%), Positives = 204/383 (53%), Gaps = 21/383 (5%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           D L++  + + + + GF   S +Q    P  + G D + Q+KSG GK+ VFV+A L +L 
Sbjct: 46  DFLLKPELLRAIVDCGFEHPSEVQNECIPQAVLGMDVLCQAKSGMGKTAVFVLATLQQL- 104

Query: 85  KLPVQ-QPQTIILAPTREIAVQITDVVRSVGAHVKNLHVDYFIGGTQVERPKRPVQ---- 139
             PV  Q   +++  TRE+A QI+        ++  + V  F GG  + + +  ++    
Sbjct: 105 -EPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTIKVAVFFGGLPITKDQTTLKNNCP 163

Query: 140 -IVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINT-GFVEDITWIYSQLPPMKQMLV 197
            IVVG+PGR+  +I+ K L + +V+ FI+DE DK++       D+  I+   P  KQ+++
Sbjct: 164 HIVVGTPGRLLALIRSKSLTLKNVKHFILDECDKMLEQLDMRRDVQDIFRLTPHEKQVMM 223

Query: 198 VSATYSHDNLATLQKYMVDPLLIRPEDATR-PLLGVKQLVALIPECKNPSLRYVDEEKKL 256
            SAT S D     +K+M DP+ +  +D  +  L G++Q            L+  ++ +KL
Sbjct: 224 FSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYV--------KLKDNEKNRKL 275

Query: 257 VQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSFKRGKV 316
             LL    FNQ VIF     R   + + L   NF A  +  A +Q+ RL+    FK  + 
Sbjct: 276 FDLLDALEFNQVVIFVKSVQRCMALAQLLKEQNFPAIDIHRAMNQEERLSRYQLFKNFER 335

Query: 317 RILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSAESLVK 376
           RILV T+L  RG+D   V++V N ++P D+ TYLHR+ RAGR+GT+GL IT VS E+  K
Sbjct: 336 RILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAK 395

Query: 377 FHSLMGEINLDHAFNVGLVPDNL 399
               + ++      NV  +PD +
Sbjct: 396 ---TLNDVQDRFEVNVTELPDEI 415


>gi|340057010|emb|CCC51350.1| putative ATP-dependent DEAD-box RNA helicase [Trypanosoma vivax
           Y486]
          Length = 410

 Score =  196 bits (498), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 125/377 (33%), Positives = 200/377 (53%), Gaps = 29/377 (7%)

Query: 4   DIQKCARTKDVLSNIDVLFENDVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIV 63
           DI+K  +T+DV S  +V FE +  + + ++ G+ E GF + SP+Q  A P  L G D + 
Sbjct: 21  DIRK--KTEDVESRRNVTFE-EYGLRRELQMGIFEKGFERPSPVQEEAIPVALQGKDVLA 77

Query: 64  QSKSGTGKSIVFVVAALNKLIKLPVQQP--QTIILAPTREIAVQITDVVRSVGAHVKNLH 121
           ++K+GTGK+  FV+  L K+      +P  Q +++ PTRE+A+Q   V + +G H+  L 
Sbjct: 78  RAKNGTGKTASFVIPVLEKV---DTHEPHIQALLMVPTRELALQTAQVTKELGKHISGLE 134

Query: 122 VDYFIGGTQVE----RPKRPVQIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTG 177
           V    GGT +     R +  V ++V +PGR+  +   +   +D  R+ ++DEADKL++  
Sbjct: 135 VMVTTGGTTLRDDILRLQHAVHVLVATPGRVVDLASKRTARLDRCRIVVLDEADKLLSHE 194

Query: 178 FVEDITWIYSQLPPMKQMLVVSATYSHDNLATLQKYMVDPLLIR-PEDATRPLLGVKQLV 236
           F + +  +Y  LP  +Q L+ SAT+         KY+ +P  I   E+ T  L GV Q  
Sbjct: 195 FTQLMKELYDYLPQDRQSLLFSATFPVTVKDFADKYLRNPYEINLMEELT--LRGVTQYY 252

Query: 237 ALIPECKNPSLRYVDEEKK---LVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAE 293
           A           +V+E +K   L  L ++   NQ +IF N   R E++ + +    +   
Sbjct: 253 A-----------FVEERQKIHCLNTLFNRLQINQSIIFCNSVNRVELLAKKITQLGYSCY 301

Query: 294 YLSGAQDQKARLASLDSFKRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRM 353
           Y+     Q+ R      F+ G  R LV +DL  RGID   V++VIN + P  A TYLHR+
Sbjct: 302 YIHARMQQQHRNRVFHDFREGHCRNLVCSDLITRGIDIQAVNVVINFDFPKYAETYLHRI 361

Query: 354 GRAGRYGTRGLVITIVS 370
           GR+GR+G  GL +  ++
Sbjct: 362 GRSGRFGHLGLAVNFIT 378


>gi|431794108|ref|YP_007221013.1| DNA/RNA helicase [Desulfitobacterium dichloroeliminans LMG P-21439]
 gi|430784334|gb|AGA69617.1| DNA/RNA helicase, superfamily II [Desulfitobacterium
           dichloroeliminans LMG P-21439]
          Length = 531

 Score =  196 bits (498), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 123/360 (34%), Positives = 194/360 (53%), Gaps = 31/360 (8%)

Query: 25  DVLIEKPIRQGLQENGFVKESPIQMAAFPYVLNGYDAIVQSKSGTGKSIVFVVAALNKLI 84
           ++ + K + Q L E GF + SPIQ  A P  ++G D I Q+++GTGK+  F +    K +
Sbjct: 11  EINLSKQVLQALSEMGFEEPSPIQKEAIPVAMDGVDLIGQAQTGTGKTAAFGIPICEK-V 69

Query: 85  KLPVQQPQTIILAPTREIAVQITDVVRSVGA--HVKNLHVDYFIGGTQVERPKRPV---- 138
               Q  Q +IL PTRE+AVQ+++ +  +G   H+K L +    GG  ++R  R +    
Sbjct: 70  NPKFQAVQALILTPTRELAVQVSEEISKIGKYRHIKPLPI---YGGQSIDRQIRALRFGS 126

Query: 139 QIVVGSPGRIKQMIKLKYLNMDSVRLFIMDEADKLINTGFVEDITWIYSQLPPM-KQMLV 197
           Q+VVG+PGR+   +    L +  V++ ++DEAD++++ GFVEDI  I  Q+PP  +QM++
Sbjct: 127 QVVVGTPGRVLDHLNRGTLKLQYVKMVVLDEADEMLDMGFVEDIETILRQVPPEERQMML 186

Query: 198 VSATYSHDNLATLQKYMVDP--LLIRPEDATRPLLGVKQLVALIPECKNPSLRYVDEEK- 254
            SAT   +     Q YM  P  + +  ++ T PL+                + Y   EK 
Sbjct: 187 FSATMPIEIKKLAQNYMHQPKSVAVSRDELTVPLI--------------EQVFYETREKI 232

Query: 255 ---KLVQLLSQTPFNQCVIFSNYQLRPEVICENLANANFGAEYLSGAQDQKARLASLDSF 311
               L +++      Q +IF   +   + +   L    + A+ L G   Q+ R   +  F
Sbjct: 233 KVDALCRIIDMEDIGQAIIFCRTKRGVDELVAALEARGYFADALHGDLSQQQRDRVMKKF 292

Query: 312 KRGKVRILVTTDLAARGIDAANVDLVINLEIPHDAATYLHRMGRAGRYGTRGLVITIVSA 371
           + GKV +LV TD+AARG+D  NV  VIN +IP D  +Y+HR+GR GR G +G  IT+VS+
Sbjct: 293 RDGKVELLVATDVAARGLDIDNVTHVINFDIPQDPESYVHRIGRTGRAGRKGQAITLVSS 352


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.310    0.128    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,190,011,987
Number of Sequences: 23463169
Number of extensions: 1893255379
Number of successful extensions: 6959817
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 32763
Number of HSP's successfully gapped in prelim test: 31935
Number of HSP's that attempted gapping in prelim test: 6114159
Number of HSP's gapped (non-prelim): 576102
length of query: 2355
length of database: 8,064,228,071
effective HSP length: 159
effective length of query: 2196
effective length of database: 8,628,551,496
effective search space: 18948299085216
effective search space used: 18948299085216
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 86 (37.7 bits)