RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8499
(591 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 122 bits (308), Expect = 3e-32
Identities = 72/186 (38%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 170 FSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNK 227
S G K Y C C K FS +L EH + H E YKC C K +S+K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 228 IYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLK 285
LT H + H G K KC C K FS++ L H + H G K C C K FS +HL+
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 286 EHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMK 343
H + H G YKC C K F R+ NL H + H G K KC C K FS + L H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 344 LHQGIK 349
H G K
Sbjct: 183 THTGKK 188
Score = 120 bits (303), Expect = 1e-31
Identities = 69/186 (37%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 143 FSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSK 200
+ G K C C K FS +L EH + H G K YKC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 201 SYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLT 258
LT H + H E YKC C K +S + L H + H G K C C K FS+ L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 259 EHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMK 316
H + H G K KC C K FS + +L H + H G YKC C K F R+ L H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 317 VHQGMK 322
H G K
Sbjct: 183 THTGKK 188
Score = 117 bits (295), Expect = 2e-30
Identities = 69/184 (37%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 413 FSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRK 470
L G K C C K FS HL EH + H G YKC C K F K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 471 QNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVT 528
++LT+H + H G K KC C K FS + +L H + H G K C C K FS +
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMK 586
H + H G K KC C K FS + L H + H G + YKC C K FSR+ L H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 587 LHLG 590
H G
Sbjct: 183 THTG 186
Score = 116 bits (293), Expect = 3e-30
Identities = 70/183 (38%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 117 SYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKS 174
+ L G + Y C C K FS +L EH + H G K KC C K FS K
Sbjct: 4 FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63
Query: 175 YLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTE 232
LT H + H G K YKC C K FS ++ L H + H E Y C C K +S +L
Sbjct: 64 DLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA 123
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQV 290
H + H G K KC C K FSR+ L H + H G K KC C K FS + L H +
Sbjct: 124 HQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183
Query: 291 HQG 293
H G
Sbjct: 184 HTG 186
Score = 112 bits (282), Expect = 8e-29
Identities = 67/186 (36%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 305 FYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCK 362
+ + + G K C C K FS +L EH + H G K KC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 363 RYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLT 420
+ +T H + H E YKC C K +S + L H + H G K C C K FS+ L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 421 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMK 478
H + H G K KC C K FS + +L H + H G YKC C K F R+ L H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 479 LHQGIK 484
H G K
Sbjct: 183 THTGKK 188
Score = 111 bits (280), Expect = 2e-28
Identities = 71/186 (38%), Positives = 88/186 (47%), Gaps = 6/186 (3%)
Query: 332 FSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNK 389
S L G K C C K FS ++ EH + H E YKC C K +S+K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 390 IYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLK 447
LT H + H G K KC C K FS++ L H + H G K C C K FS +HL+
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 448 EHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMK 505
H + H G YKC C K F R+ NL H + H G K KC C K FS + +L H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 506 LHQGIK 511
H G K
Sbjct: 183 THTGKK 188
Score = 109 bits (275), Expect = 7e-28
Identities = 68/167 (40%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCV 164
Y C C K +S L EH + H G + YKC C K FS K+ LT H + H G K KC
Sbjct: 22 YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLK 222
C K FS ++ L H + H G K Y C C K FS ++L H + H E YKC C K
Sbjct: 82 ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 223 EYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
+S + L H + H G K KC C K FSR+ L H + H G K
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188
Score = 103 bits (260), Expect = 8e-26
Identities = 67/186 (36%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 359 FSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRK 416
L E Y C C K +S +L EH + H G K KC C K FS K
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 417 RRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLT 474
+ LT H + H G K KC C K FS +++L+ H + H G Y C C K F + +L
Sbjct: 63 KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMK 532
H + H G K KC C K FS + +L H + H G K KC C K FS + ++ H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 533 LHLGIK 538
H G K
Sbjct: 183 THTGKK 188
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 99.2 bits (248), Expect = 3e-24
Identities = 54/202 (26%), Positives = 75/202 (37%), Gaps = 41/202 (20%)
Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCD--LCSKEFSCKRYLTEHMKVHQGMKN 161
Y C C Y+ L H+ H G + + C C K F+ +LT H H G KN
Sbjct: 13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72
Query: 162 -KC--VLCSKEFSSKSYLTEHMKRHQGIK---YKCNL--CSKEFSSKSYLTEHMKLH-QE 212
C C F++K+ + +H R IK Y C+ C K F + L H H Q+
Sbjct: 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132
Query: 213 ITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKN-KC 271
+ Y+C C K FS RL H K+H G K
Sbjct: 133 LPYEC-------------------------PHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 167
Query: 272 NLCSKEFSCKSHLKEHMQ-VHQ 292
+ CS + +H+ HQ
Sbjct: 168 DSCSFVGKTWTLYLKHVAECHQ 189
Score = 98.8 bits (247), Expect = 5e-24
Identities = 50/215 (23%), Positives = 71/215 (33%), Gaps = 46/215 (21%)
Query: 179 HMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 234
K Y C+ C ++ L H+ H E + C
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPC----------------- 45
Query: 235 KLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN--LCSKEFSCKSHLKEHMQVH 291
K C K F+ LT H H G KN C+ C F+ K+++K+H
Sbjct: 46 --------KEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97
Query: 292 QG---ITYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KC--VLCSKEFSSKSYLTEHMK 343
Y C C K F + L H H +C C K FS S L H K
Sbjct: 98 HNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 157
Query: 344 LHQGIK----NKCDLCSKEFSCKRYVTEHMKLHQE 374
+H G + C K ++ Y+ + HQ+
Sbjct: 158 VHAGYPCKKDDSCSFVGKTWT--LYLKHVAECHQD 190
Score = 93.8 bits (234), Expect = 2e-22
Identities = 47/183 (25%), Positives = 67/183 (36%), Gaps = 18/183 (9%)
Query: 422 HMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQGIT-YKCN--LCSKEFYRKQNLTK 475
L + K C+ C ++ L+ H+ H G + C C K F +LT+
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 476 HMKLHQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIKK---KCDL--CSKEFSCKRSV 527
H H G K CD C F+TK ++ +H IK C C K F +
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 528 TEHMKLHLGIKN-KC--DLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTE 583
H H +C + C K FS L H K+H G K D C+ +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182
Query: 584 HMK 586
H+
Sbjct: 183 HVA 185
Score = 93.0 bits (232), Expect = 4e-22
Identities = 48/170 (28%), Positives = 63/170 (37%), Gaps = 16/170 (9%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIK-NKCN--LCSKEFSCKSHLKEHMQVHQG-ITYKCN--L 462
C +++ +L H+ H G K C C K F+ HL H H G + C+
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 463 CSKEFYRKQNLTKHMKLHQGIKK---KCDL--CSKEFSTKCSLTEHMKLHQGIKK-KC-- 514
C F K N+ KH IK C C K F L H H +C
Sbjct: 80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139
Query: 515 DLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMK-LHQ 562
+ C K FS + H K+H G K D CS T +H+ HQ
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 91.5 bits (228), Expect = 2e-21
Identities = 52/183 (28%), Positives = 67/183 (36%), Gaps = 18/183 (9%)
Query: 368 HMKLHQ-EITYKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKC--VLCSKEFSRKRRLTE 421
L Y C C Y+ L HL H G K C C K F+ LT
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 422 HMKLHLGIKN-KCN--LCSKEFSCKSHLKEHMQVHQG---ITYKCNL--CSKEFYRKQNL 473
H H G KN C+ C F+ K+++K+H Y C+ C K F + L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 474 TKHMKLHQGIKK-KC--DLCSKEFSTKCSLTEHMKLHQGIK-KKCDLCSKEFSCKRSVTE 529
H H +C + C K FS L H K+H G KK D CS +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182
Query: 530 HMK 532
H+
Sbjct: 183 HVA 185
Score = 81.5 bits (202), Expect = 5e-18
Identities = 45/149 (30%), Positives = 59/149 (39%), Gaps = 16/149 (10%)
Query: 458 YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIKK 512
Y C+ C + + L H+ H G K C C K F++ LT H H G K
Sbjct: 13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72
Query: 513 -KCD--LCSKEFSCKRSVTEHMKLHLGIKN---KCDL--CSKEFSTKHTLTEHMKLHQGI 564
CD C F+ K ++ +H IK C C K F + L H H
Sbjct: 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132
Query: 565 R-YKC--DLCTKEFSRKGRLTEHMKLHLG 590
Y+C + C K FS RL H K+H G
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAG 161
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 87.3 bits (217), Expect = 2e-20
Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 36/174 (20%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ----EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNK 243
+ + CS+EF S+ L H+ + C
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG----------------------G 41
Query: 244 CVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQGIT-YKC- 298
C + F + L HM+ H G K +KC C K +S +LK H++ H G Y C
Sbjct: 42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101
Query: 299 -DLCSKEFYRKQNLTKHMK-VHQGMKN---KCVLCSKEFSSKSYLTEHMKLHQG 347
+ CSK F + KH H K K C+K ++ S L +H+K G
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 80.3 bits (199), Expect = 5e-18
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 377 YKCDLCLKEYSNKIYLTEHLK---LHQGIKN------KCVLCSKEFSRKRRLTEHMKLHL 427
+ D C +E+ ++ L H+ +H K C + F + L HM+ H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 428 GIK-NKCNL--CSKEFSCKSHLKEHMQVHQGIT-YKCN--LCSKEFYRKQNLTKHMK-LH 480
G K +KC C K +S +LK H++ H G Y C CSK F + KH H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 481 QGIKK-KCDL--CSKEFSTKCSLTEHMKLHQG 509
K C L C+K ++ SL +H+K G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 80.3 bits (199), Expect = 5e-18
Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 42/177 (23%)
Query: 134 YKCDLCSKEFSCKRYLTEHMK---VHQGMKN------KCVLCSKEFSSKSYLTEHMKRHQ 184
+ D CS+EF + L H+ +H K C + F ++ L HM+RH
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 185 GIK-YKCNL--CSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGI 240
G K +KC C K +S L H++ H E Y C+
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH--------------------- 102
Query: 241 KNKCVLCSKEFSRKRRLTEHMK-LHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQG 293
CSK FS +H H K C L C+K ++ S L++H++ G
Sbjct: 103 ----EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 79.9 bits (198), Expect = 8e-18
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
Query: 107 YKCDLCSKEYSYKHTLTEHMK---LHQGIR-YKCDLC-----SKEFSCKRYLTEHMKVHQ 157
+ D CS+E+ + L H+ +H + + C + F + L HM+ H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 158 GMK-NKCVL--CSKEFSSKSYLTEHMKRHQGIK-YKCN--LCSKEFSSKSYLTEHMK-LH 210
G K +KC C K +S L H++ H G K Y C CSK FS+ S +H H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 211 Q-EITYKCDL--CLKEYSNKIYLTEHLKLHQG 239
E Y C L C K Y++ L +H+K G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 79.6 bits (197), Expect = 1e-17
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 19/151 (12%)
Query: 405 KCVLCSKEFSRKRRLTEHMK---LHLGIKN------KCNLCSKEFSCKSHLKEHMQVHQG 455
+ CS+EF + +L H+ +H K C+ + F + L HM+ H G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 456 IT-YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KC--DLCSKEFSTKCSLTEHMK-LHQ 508
+KC C K + R +NL H++ H G K C + CSK FS +H H
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 509 GIKK-KCDL--CSKEFSCKRSVTEHMKLHLG 536
K C L C+K ++ S+ +H+K G
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 78.0 bits (193), Expect = 4e-17
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 458 YKCNLCSKEFYRKQNLTKHMK---LHQGIK------KKCDLCSKEFSTKCSLTEHMKLHQ 508
+ + CS+EF ++ L H+ +H K C + F + L HM+ H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 509 GIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIK-NKC--DLCSKEFSTKHTLTEHMK-LH 561
G K KC C K +S ++ H++ H G K C + CSK FS +H H
Sbjct: 64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 562 QGIR-YKCDL--CTKEFSRKGRLTEHMKLHLG 590
+ Y C L CTK ++ L +H+K G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 77.6 bits (192), Expect = 5e-17
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 243 KCVLCSKEFSRKRRLTEHMK---LHLGIKN------KCNLCSKEFSCKSHLKEHMQVHQG 293
+ CS+EF + +L H+ +H K C+ + F + L HM+ H G
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 294 IT-YKCDL--CSKEFYRKQNLTKHMKVHQGMK-NKC--VLCSKEFSSKSYLTEHMK-LHQ 346
+KC C K + R +NL H++ H G K C CSK FS+ S +H H
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124
Query: 347 GIK-NKCDL--CSKEFSCKRYVTEHMKLH 372
K C L C+K ++ + +H+K
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 84.5 bits (210), Expect = 6e-20
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 107 YKCD--LCSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMK- 160
+ C C+K Y L H + H G + Y+CD C + FS L H + H G+K
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 161 NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLH 210
+C C ++FS +L H + H G K + C C K+F+ L H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 82.6 bits (205), Expect = 3e-19
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNL--CSKEFSCKSHLKEHMQVHQGIT-YKCDLCS 302
C+K + + L H + H G K +C+ C + FS LK H + H G+ ++C C
Sbjct: 14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 303 KEFYRKQNLTKHMKVHQGMK-NKCVL--CSKEFSSKSYLTEHMKLH 345
++F R +L H + H G K C C K+F+ L H +H
Sbjct: 74 RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 81.8 bits (203), Expect = 7e-19
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNL--CSKEFSCKSHLKEHMQVHQGIT-YKCNLCS 464
C+K + + L H + H G K +C+ C + FS LK H + H G+ ++C C
Sbjct: 14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 465 KEFYRKQNLTKHMKLHQGIKK-KCDL--CSKEFSTKCSLTEHMKLH 507
++F R +L H + H G K C C K+F+ L H +H
Sbjct: 74 RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 80.6 bits (200), Expect = 1e-18
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Query: 432 KCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLHQGIKK- 485
C C+K + SHL+ H + H G Y+C+ C + F R L +H + H G+K
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEHMKLH 534
+C C ++FS L H + H G K C C K+F+ + H +H
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 79.9 bits (198), Expect = 3e-18
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Query: 270 KCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCDL--CSKEFYRKQNLTKHMKVHQGMK-N 323
C C+K + SHL+ H + H G Y+CD C + F R L +H + H G+K
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSCKRYVTEHMKLH 372
+C C ++FS +L H + H G K C C K+F+ + H +H
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 79.5 bits (197), Expect = 4e-18
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 32/138 (23%)
Query: 188 YKCN--LCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKC 244
+ C C+K + S+L H + H E Y+CD
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCD-------------------------F 41
Query: 245 VLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDL-- 300
C + FSR +L H + H G+K +C C ++FS HLK H + H G + C
Sbjct: 42 KDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS 101
Query: 301 CSKEFYRKQNLTKHMKVH 318
C K+F R L +H +H
Sbjct: 102 CQKKFARSDELVRHHNMH 119
Score = 77.6 bits (192), Expect = 2e-17
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 377 YKCD--LCLKEYSNKIYLTEHLKLHQGIKN-KCVL--CSKEFSRKRRLTEHMKLHLGIK- 430
+ C C K Y +L H + H G K +C C + FSR +L H + H G+K
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 431 NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLH 480
+C C ++FS HLK H + H G + C C K+F R L +H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 77.2 bits (191), Expect = 3e-17
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 32/138 (23%)
Query: 134 YKCD--LCSKEFSCKRYLTEHMKVHQGMKN-KCVL--CSKEFSSKSYLTEHMKRHQGIK- 187
+ C C+K + +L H + H G K +C C + FS L H +RH G+K
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 188 YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVL 246
++C C ++FS +L H + H E + C +
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC-------------------------RWPS 101
Query: 247 CSKEFSRKRRLTEHMKLH 264
C K+F+R L H +H
Sbjct: 102 CQKKFARSDELVRHHNMH 119
Score = 76.0 bits (188), Expect = 6e-17
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 458 YKCN--LCSKEFYRKQNLTKHMKLHQGIKK-KCDL--CSKEFSTKCSLTEHMKLHQGIKK 512
+ C C+K +++ +L H + H G K +CD C + FS L H + H G+K
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLH 561
+C C ++FS + H + H G K C C K+F+ L H +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 74.1 bits (183), Expect = 3e-16
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 486 KCD--LCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIK-N 539
C C+K + L H + H G K +CD C + FS + H + H G+K
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSRKGRLTEHMKLH 588
+C C ++FS L H + H G + + C C K+F+R L H +H
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 59.5 bits (145), Expect = 4e-11
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 513 KCD--LCSKEFSCKRSVTEHMKLHLGIKN-KCDL--CSKEFSTKHTLTEHMKLHQGIR-Y 566
C C+K + + H + H G K +CD C + FS L H + H G++ +
Sbjct: 8 MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67
Query: 567 KCDLCTKEFSRKGRLTEHMKLHLG 590
+C C ++FSR L H + H G
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTG 91
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 83.9 bits (208), Expect = 3e-19
Identities = 33/165 (20%), Positives = 52/165 (31%), Gaps = 26/165 (15%)
Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKE 223
+ C + FS+ L H+ + + +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 224 YSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSC 280
+C K F K +L H+++H G K C C K F+
Sbjct: 63 E------------------ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR 104
Query: 281 KSHLKEHMQVHQGIT-YKCDL--CSKEFYRKQNLTKHMKVHQGMK 322
+LK H + H G +KC+ C + F + KHM VH K
Sbjct: 105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 78.9 bits (195), Expect = 2e-17
Identities = 34/147 (23%), Positives = 50/147 (34%), Gaps = 17/147 (11%)
Query: 220 CLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK---------- 268
+ + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 269 NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDL--CSKEFYRKQNLTKHMKVHQGMK-NK 324
+C K F K L H++VH G + C C K F R +NL H + H G K K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 325 CVL--CSKEFSSKSYLTEHMKLHQGIK 349
C C + F++ S +HM +H K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 78.1 bits (193), Expect = 4e-17
Identities = 33/147 (22%), Positives = 49/147 (33%), Gaps = 17/147 (11%)
Query: 382 CLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK---------- 430
+ + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 431 NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-K 486
+C K F K L H++VH G + C C K F R +NL H + H G K K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 487 CDL--CSKEFSTKCSLTEHMKLHQGIK 511
C+ C + F+ +HM +H K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 76.9 bits (190), Expect = 7e-17
Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 17/129 (13%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG----------IRYKCDLCSKEFSCKRYLTEHMKVH 156
C + +S H L H+ + +C K F K L H++VH
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 157 QGMK-NKCVL--CSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLH 210
G K C C K F+ L H + H G K +KC C + F++ S +HM +H
Sbjct: 86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145
Query: 211 Q-EITYKCD 218
+ +
Sbjct: 146 TSDKSGPSS 154
Score = 75.4 bits (186), Expect = 3e-16
Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 17/147 (11%)
Query: 112 CSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK---------- 160
+ + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 161 NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLHQ-EITYK 216
+C K F +K L H++ H G K + C C K F+ L H + H E +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 217 CDL--CLKEYSNKIYLTEHLKLHQGIK 241
C+ C + ++N +H+ +H K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 75.4 bits (186), Expect = 3e-16
Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 17/147 (11%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG----------IT 457
++ + C + FS L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDL--CSKEFSTKCSLTEHMKLHQGIKK-K 513
+C K F K L H+++H G K C C K F+ +L H + H G K K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 514 CDL--CSKEFSCKRSVTEHMKLHLGIK 538
C+ C + F+ +HM +H K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 75.0 bits (185), Expect = 4e-16
Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 17/145 (11%)
Query: 463 CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK---------- 511
+ + + C + FST L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 512 KKCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLHQGIR-YK 567
++C K F K + H+++H G K C C K F+ L H + H G + +K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 568 CDL--CTKEFSRKGRLTEHMKLHLG 590
C+ C + F+ +HM +H
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTS 147
Score = 74.2 bits (183), Expect = 8e-16
Identities = 31/165 (18%), Positives = 51/165 (30%), Gaps = 26/165 (15%)
Query: 328 CSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKE 385
+ + C + FS + H+ + + +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 386 YSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSC 442
+C K F K +L H+++H G K C C K F+
Sbjct: 63 E------------------ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR 104
Query: 443 KSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLHQGIK 484
+LK H + H G +KC C + F + KHM +H K
Sbjct: 105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 70.4 bits (173), Expect = 1e-14
Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 20/148 (13%)
Query: 276 KEFSCKSHLKEHMQVHQGIT----YKCDLCSKEFYRKQNLTKHMKVHQGMK--------- 322
S +K+ + C + F L H+ +
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 323 -NKCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSCKRYVTEHMKLHQ-EITY 377
+C K F +K L H+++H G K C C K F+ + H + H E +
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121
Query: 378 KCDL--CLKEYSNKIYLTEHLKLHQGIK 403
KC+ C + ++N +H+ +H K
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 55.4 bits (134), Expect = 2e-09
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Query: 95 GKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTE 151
G ++ +C K + K+ L H+++H G + + C C K F+ L
Sbjct: 51 GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKI 110
Query: 152 HMKVHQGMK-NKCVL--CSKEFSSKSYLTEHMKRHQGIK-YKCN 191
H + H G K KC C + F++ S +HM H K +
Sbjct: 111 HKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 82.2 bits (204), Expect = 5e-19
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMK---VHQGMKN- 161
+C C K++ K+ L H + H G + ++C C K + K L EH +++ +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMK 208
C +C + F + L HM H G YKC+ CS++F K L HM
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115
Score = 80.2 bits (199), Expect = 2e-18
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT----YK 297
+C C K+F K L H + H G K +C C K + K +L EH + +
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 298 CDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHM-KLHQGIK 349
C +C + F R+ L HM H G KC CS++F K L HM KLH G
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 79.5 bits (197), Expect = 5e-18
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKR---HQGIK-Y 188
+C C K+F K YL H + H G K +C C K + K L EH R ++ + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 189 KCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEH-LKLHQGIK 241
C++C + F + L HM H E+ YKC C +++ K L H +KLH G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 79.1 bits (196), Expect = 6e-18
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT----YK 459
+C C K+F K L H + H G K +C C K + K +L EH + +
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 460 CNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHM-KLHQGIK 511
C++C + F R+ L HM H G KC CS++F K L HM KLH G
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 77.2 bits (191), Expect = 3e-17
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEH---LKLHQGIKN- 242
+C C K+F SK YL H + H E ++C C K Y K L EH +++ +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQ-VHQG 293
C +C + F R+ L HM H G KC+ CS++F K L+ HM +H G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 71.8 bits (177), Expect = 2e-15
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKL---HQGIKK- 512
+C C K+F K L H + H G K +C C K + K +L EH ++ +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHM-KLHQG 563
C +C + F + + HM H G KC CS++F K L HM KLH G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 70.2 bits (173), Expect = 9e-15
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKL---HLGIKN-K 540
+C C K+F +K L H + H G K +C C K + K ++ EH + +
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 541 CDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHM-KLHLG 590
C +C + F + L HM H G YKC C+++F +K L HM KLH G
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 67.1 bits (165), Expect = 8e-14
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKL---HQGIKN- 350
+C C K+F K L H + H G K +C C K + K L EH ++ +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67
Query: 351 KCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEH-LKLHQGIK 403
C +C + F + + HM H E+ YKC C +++ K L H +KLH G
Sbjct: 68 TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 44.4 bits (106), Expect = 8e-06
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHM-KVHQGMK 160
+ C +C + + + L HM H G YKC CS++F K+ L HM K+H G
Sbjct: 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 29.8 bits (68), Expect = 0.92
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
+C C K+F K L H + H G
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTG 32
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 78.3 bits (194), Expect = 1e-17
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMK-NKC 163
C C+K + + +H+ H + C C K F L H VH G K +C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 164 VL--CSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLH 210
C K FS L H++ H G + Y C C+K+F+ + L H+ H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 77.2 bits (191), Expect = 3e-17
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 433 CNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDL-- 489
C+K F S +++H+ H + C C K F L +H +H G K +C
Sbjct: 10 HKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 69
Query: 490 CSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIK 538
C K FS +L H+++H G + C C+K+F+ ++ H+ H K
Sbjct: 70 CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Score = 73.7 bits (182), Expect = 4e-16
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 188 YKCNL--CSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKC 244
C C+K F S + +H+ H + C C K + L H +H G K +C
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65
Query: 245 VL--CSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQG 293
C K FS L H+++H G + C C+K+F+ ++LK H+ H
Sbjct: 66 TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 67.2 bits (165), Expect = 9e-14
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 490 CSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CS 545
C+K F ++ +H+ H G + C C K F + H +H G K +C C
Sbjct: 13 CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 546 KEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSRKGRLTEHMKLHLG 590
K FS L H+++H G R Y C C K+F++ L H+ H
Sbjct: 72 KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 67.2 bits (165), Expect = 9e-14
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Query: 355 CSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVL--CSK 411
C+K F + +H+ H + C C K + L H +H G K +C C K
Sbjct: 13 CTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK 72
Query: 412 EFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQG 455
FS L H+++H G + C C+K+F+ ++LK H+ H
Sbjct: 73 RFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 62.5 bits (153), Expect = 4e-12
Identities = 34/163 (20%), Positives = 51/163 (31%), Gaps = 54/163 (33%)
Query: 271 CNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVL-- 327
C+K F S +++H+ H + C C K F L +H VH G K +C
Sbjct: 10 HKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 69
Query: 328 CSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYS 387
C K FS L H+++H G + Y C
Sbjct: 70 CGKRFSLDFNLRTHVRIHTG--------------------------DRPYVCPF------ 97
Query: 388 NKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK 430
C+K+F++ L H+ H K
Sbjct: 98 -----DG--------------CNKKFAQSTNLKSHILTHAKAK 121
Score = 61.8 bits (151), Expect = 8e-12
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 295 TYKCDL--CSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK-N 350
T C C+K F + KH+ H G + + C C K F S L H +H G K
Sbjct: 5 TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63
Query: 351 KCDL--CSKEFSCKRYVTEHMKLHQ-EITYKCDL--CLKEYSNKIYLTEHLKLHQGIK 403
+C C K FS + H+++H + Y C C K+++ L H+ H K
Sbjct: 64 QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Score = 60.2 bits (147), Expect = 2e-11
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMK-NK 162
+ C C K + L H +H G + ++C C K FS L H+++H G +
Sbjct: 35 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94
Query: 163 CVL--CSKEFSSKSYLTEHMKRHQGIK 187
C C+K+F+ + L H+ H K
Sbjct: 95 CPFDGCNKKFAQSTNLKSHILTHAKAK 121
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 76.7 bits (190), Expect = 2e-17
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
+KC++C K FS K L HM+ H G+K KC C + S L +H++ H + +KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 192 LCSKEFSSKSYLTEHMKLHQ-EITYKC 217
+C + S LT H++ H +
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 73.2 bits (181), Expect = 3e-16
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVL 327
KC +C K FS K LK HM+ H G+ YKC C +L KH+++H + KC +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 328 CSKEFSSKSYLTEHMKLHQGIK 349
C + S LT H++ H G
Sbjct: 70 CPYASRNSSQLTVHLRSHTGDS 91
Score = 71.7 bits (177), Expect = 1e-15
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDL 489
KC +C K FS K LK HM+ H G+ YKC C +L KH+++H + KC +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 490 CSKEFSTKCSLTEHMKLHQGIK 511
C LT H++ H G
Sbjct: 70 CPYASRNSSQLTVHLRSHTGDS 91
Score = 71.3 bits (176), Expect = 2e-15
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
+KC++C K +S K L HM+ H G++ YKC C + L +H+++H + KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKC 190
+C + S LT H++ H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 69.0 bits (170), Expect = 1e-14
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNL 462
KC +C K FSRK +L HM+ H G+K KC C + S L +H+++H +KC +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 463 CSKEFYRKQNLTKHMKLHQGIK 484
C LT H++ H G
Sbjct: 70 CPYASRNSSQLTVHLRSHTGDS 91
Score = 66.7 bits (164), Expect = 6e-14
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCD 515
+KC +C K F RK L HM+ H G+K KC C + SL +H+++H + KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 516 LCSKEFSCKRSVTEHMKLHLGIK 538
+C +T H++ H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDS 91
Score = 66.7 bits (164), Expect = 7e-14
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCD 353
+KC++C K F RK L HM+ H G+K KC C + S L +H+++H + KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 354 LCSKEFSCKRYVTEHMKLHQ-EITYKC 379
+C +T H++ H +
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 64.0 bits (157), Expect = 7e-13
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
KC++C K FS K + HM+ H G+K KC C + +L +H+++H R +KC +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 571 CTKEFSRKGRLTEHMKLHLG 590
C +LT H++ H G
Sbjct: 70 CPYASRNSSQLTVHLRSHTG 89
Score = 62.8 bits (154), Expect = 1e-12
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCV 245
+KC +C K FS K L HM+ H YKC C ++ L +HL++H + KC
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 246 LCSKEFSRKRRLTEHMKLHLGIK 268
+C +LT H++ H G
Sbjct: 69 ICPYASRNSSQLTVHLRSHTGDS 91
Score = 57.4 bits (140), Expect = 1e-10
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH-QEITYKCDL 381
KC +C K FS K L HM+ H G+K KC C + + +H+++H E +KC +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 382 CLKEYSNKIYLTEHLKLHQGIK 403
C N LT HL+ H G
Sbjct: 70 CPYASRNSSQLTVHLRSHTGDS 91
Score = 30.9 bits (71), Expect = 0.27
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
+KC++C K FSRK +L HM+ H G
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTG 33
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 77.1 bits (191), Expect = 2e-17
Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTE 178
+ + + + C C + F+ L H + H + C +C K F + +L +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKC 217
H H K +KC C K F L H LH Q +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 69.4 bits (171), Expect = 8e-15
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Query: 173 KSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYL 230
S + + K + C C + F+ L H + H E Y CD+C K + + +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 231 TEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 272
+H +H K KC C K F + R L H LH+ +
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 69.0 bits (170), Expect = 1e-14
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
Query: 281 KSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
S + + C C + F + NL H + H + C +C K F + +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 339 TEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH-QEITYKC 379
+H +H K KC C K F R + H LH Q +
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 68.2 bits (168), Expect = 2e-14
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 391 YLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKE 448
+ + K C C + F++ L H + H + C++C K F + HL++
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
H +H +KC C K F + + L H LH
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100
Score = 67.8 bits (167), Expect = 3e-14
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 229 YLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKE 286
+ + K C C + F++ L H + H + C++C K F + HL++
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
H +H +KC C K F + + L H +H
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100
Score = 67.8 bits (167), Expect = 3e-14
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCV 164
+ C C + ++ + L H + H R Y CD+C K F + +L +H +H K KC
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
C K F L H H
Sbjct: 78 ECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 67.5 bits (166), Expect = 5e-14
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 443 KSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSL 500
S + + C C + F + NL H + H + CD+C K F + L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 501 TEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
+H +H K KC C K F R++ H LH+
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100
Score = 62.8 bits (154), Expect = 2e-12
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Query: 499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTE 556
+ + K+ C C + F+ ++ H + H + CD+C K F + L +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
H +H + +KC C K F + L H LH+
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98
Score = 59.8 bits (146), Expect = 2e-11
Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 310 NLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTE 367
+ + K C C + F+ L H + H + CD+C K F + ++ +
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 368 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 403
H +H E +KC C K + L H LH
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100
Score = 59.0 bits (144), Expect = 4e-11
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Query: 335 KSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYL 392
S + + K C C + F+ + H + H E Y CD+C K + + +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 393 TEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 434
+H +H K KC C K F + R L H LH+ +
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 74.0 bits (183), Expect = 1e-16
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKE 304
C + FS+ LT H+++H G K +C +C + FS HL H++ H G + CD+C ++
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 305 FYRKQNLTKHMKVHQGMKN 323
F R +H K+H K+
Sbjct: 72 FARSDERKRHTKIHLRQKD 90
Score = 74.0 bits (183), Expect = 2e-16
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 134 YKCDL--CSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YK 189
Y C + C + FS LT H+++H G K +C +C + FS +LT H++ H G K +
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 190 CNLCSKEFSSKSYLTEHMKLH 210
C++C ++F+ H K+H
Sbjct: 65 CDICGRKFARSDERKRHTKIH 85
Score = 72.9 bits (180), Expect = 3e-16
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKE 331
C + FS L H+++H G ++C +C + F R +LT H++ H G K C +C ++
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 332 FSSKSYLTEHMKLHQGIKN 350
F+ H K+H K+
Sbjct: 72 FARSDERKRHTKIHLRQKD 90
Score = 72.5 bits (179), Expect = 6e-16
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKE 493
C + FS L H+++H G ++C +C + F R +LT H++ H G K CD+C ++
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 494 FSTKCSLTEHMKLHQGIK 511
F+ H K+H K
Sbjct: 72 FARSDERKRHTKIHLRQK 89
Score = 71.7 bits (177), Expect = 8e-16
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKE 466
C + FS+ LT H+++H G K +C +C + FS HL H++ H G + C++C ++
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 467 FYRKQNLTKHMKLHQGIK 484
F R +H K+H K
Sbjct: 72 FARSDERKRHTKIHLRQK 89
Score = 67.9 bits (167), Expect = 2e-14
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 458 YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-K 513
Y C + C + F + +LT+H+++H G K +C +C + FS LT H++ H G K
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 514 CDLCSKEFSCKRSVTEHMKLHLGIKN 539
CD+C ++F+ H K+HL K+
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQKD 90
Score = 66.7 bits (164), Expect = 5e-14
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NK 162
Y C + C + +S +LT H+++H G + ++C +C + FS +LT H++ H G K
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 163 CVLCSKEFSSKSYLTEHMKRHQGIK 187
C +C ++F+ H K H K
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQK 89
Score = 65.2 bits (160), Expect = 2e-13
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 513 KCDL--CSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
C + C + FS S+T H+++H G K +C +C + FS LT H++ H G + + C
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 569 DLCTKEFSRKGRLTEHMKLHLG 590
D+C ++F+R H K+HL
Sbjct: 66 DICGRKFARSDERKRHTKIHLR 87
Score = 65.2 bits (160), Expect = 2e-13
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKE 223
C + FS LT H++ H G K ++C +C + FS +LT H++ H E + CD+C ++
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 224 YSNKIYLTEHLKLHQGIKN 242
++ H K+H K+
Sbjct: 72 FARSDERKRHTKIHLRQKD 90
Score = 62.1 bits (152), Expect = 2e-12
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 377 YKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NK 432
Y C + C + +S LT H+++H G K +C +C + FSR LT H++ H G K
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 433 CNLCSKEFSCKSHLKEHMQVHQG 455
C++C ++F+ K H ++H
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 54.0 bits (131), Expect = 2e-09
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 351 KCDL--CSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKC 406
C + C + FS +T H+++H + ++C +C++ +S +LT H++ H G K C
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65
Query: 407 VLCSKEFSRKRRLTEHMKLHLGIKN 431
+C ++F+R H K+HL K+
Sbjct: 66 DICGRKFARSDERKRHTKIHLRQKD 90
Score = 53.6 bits (130), Expect = 2e-09
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN 161
++C +C + +S LT H++ H G + + CD+C ++F+ H K+H K+
Sbjct: 35 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD 90
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 74.8 bits (185), Expect = 1e-16
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
Y C C K +++K HM +H G+R Y C +C K+F K +L HMK+H G+K +C
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLT 204
+C+K F + H+ K Y+ + + S +
Sbjct: 70 ICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 66.7 bits (164), Expect = 9e-14
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKE 493
C K F+ KS HM +H G+ Y C +C K+F K +L HMK+H GIK +C++C+K
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 494 FSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVT 528
F + S H+ K + + + +
Sbjct: 75 FMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 64.8 bits (159), Expect = 5e-13
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 434
Y C C K +++K H+ +H G++ C +C K+F K L HMK+H GIK +CN
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 435 LCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLT 474
+C+K F + H V +Y+ + +
Sbjct: 70 ICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 64.4 bits (158), Expect = 5e-13
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKE 331
C K F+ KS HM +H G+ Y C +C K+F K +L HMK+H G+K +C +C+K
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 332 FSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCK 362
F + H+ K+ + + +
Sbjct: 75 FMWRDSFHRHV--TSCTKSYEAAKAEQNTTEA 104
Score = 63.6 bits (156), Expect = 1e-12
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKE 223
C K F+ KS HM H G++ Y C +C K+F K +L HMK+H Y+C++C K
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 224 YSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLT 258
+ + H + K+ + + + +
Sbjct: 75 FMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGPS 108
Score = 63.2 bits (155), Expect = 2e-12
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 272
Y C C K +++K H+ +H G++ C +C K+F K L HMK+H GIK +CN
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69
Query: 273 LCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLT 312
+C+K F + H V +Y+ + +
Sbjct: 70 ICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 62.5 bits (153), Expect = 3e-12
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDL 543
C C K F+ K HM +H G++ C +C K+F K + HMK+H GIK +C++
Sbjct: 12 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70
Query: 544 CSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLT 582
C+K F + + H+ + Y+ + + +
Sbjct: 71 CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 55.5 bits (135), Expect = 7e-10
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
C C K F+ K HM +HLG++ C +C K+F KH L HMK+H GI+ Y+C++
Sbjct: 12 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70
Query: 571 CTKEFSRKGRLTEHM 585
C K F + H+
Sbjct: 71 CAKRFMWRDSFHRHV 85
Score = 54.0 bits (131), Expect = 3e-09
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 328 CSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKE 385
C K F+ KS HM +H G++ C +C K+F K ++ HMK+H Y+C++C K
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 386 YSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLT 420
+ + H + K+ + + + +
Sbjct: 75 FMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGPS 108
Score = 44.7 bits (107), Expect = 5e-06
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
C C K F+ K HM +H G+R Y C +C K+F K L HMK+H G
Sbjct: 12 PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 71.1 bits (175), Expect = 2e-15
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 413 FSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYR 469
E ++H C K ++ SHLK H++ H G YKC C F R
Sbjct: 3 SGSSGPDLEKRRIHYCDYPGCT---KVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 470 KQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQ 508
LT+H + H G K +C +C++ FS L HMK HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 68.8 bits (169), Expect = 1e-14
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 251 FSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDL--CSKEFYR 307
E ++H C K ++ SHLK H++ H G YKC C F R
Sbjct: 3 SGSSGPDLEKRRIHYCDYPGCT---KVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 308 KQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQ 346
LT+H + H G K +C +C++ FS +L HMK HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 62.3 bits (152), Expect = 2e-12
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 225 SNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCK 281
+ E ++H C +K +++ L H++ H G K KC C F+
Sbjct: 4 GSSGPDLEKRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60
Query: 282 SHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQ 319
L H + H G ++C +C++ F R +L HMK HQ
Sbjct: 61 DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 60.7 bits (148), Expect = 1e-11
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 387 SNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCK 443
+ E ++H C +K +++ L H++ H G K KC C F+
Sbjct: 4 GSSGPDLEKRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60
Query: 444 SHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQ 481
L H + H G ++C +C++ F R +L HMK HQ
Sbjct: 61 DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 58.8 bits (143), Expect = 4e-11
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 117 SYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVL--CSKEFSSK 173
E ++H C+K ++ +L H++ H G K KC C F+
Sbjct: 4 GSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60
Query: 174 SYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ 211
LT H ++H G K ++C +C++ FS +L HMK HQ
Sbjct: 61 DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 58.4 bits (142), Expect = 7e-11
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 494 FSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFST 550
+ E ++H C+K ++ + H++ H G K KC C F+
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 551 KHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLH 588
LT H + H G + ++C +C + FSR L HMK H
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 57.6 bits (140), Expect = 1e-10
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 197 FSSKSYLTEHMKLHQEITYKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKCVL--CSKEF 251
S E ++H CD C K Y+ +L HL+ H G K KC C F
Sbjct: 3 SGSSGPDLEKRRIH-----YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 252 SRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 292
+R LT H + H G K +C +C++ FS HL HM+ HQ
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 57.3 bits (139), Expect = 2e-10
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 143 FSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSS 199
E ++H C +K ++ S+L H++ H G K YKC C F+
Sbjct: 3 SGSSGPDLEKRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 200 KSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQ 238
LT H + H ++C +C + +S +L H+K HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 56.9 bits (138), Expect = 2e-10
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMKN 161
+ CD C+K Y+ L H++ H G + YKC C F+ LT H + H G K
Sbjct: 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP 75
Query: 162 -KCVLCSKEFSSKSYLTEHMKRHQ 184
+C +C++ FS +L HMKRHQ
Sbjct: 76 FQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 56.1 bits (136), Expect = 4e-10
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 467 FYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSC 523
+ ++H C+K ++ L H++ H G K KC C F+
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 524 KRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQ 562
+T H + H G K +C +C++ FS L HMK HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 54.6 bits (132), Expect = 2e-09
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 359 FSCKRYVTEHMKLHQEITYKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKCVL--CSKEF 413
E ++H CD C K Y+ +L HL+ H G K KC C F
Sbjct: 3 SGSSGPDLEKRRIH-----YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 414 SRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
+R LT H + H G K +C +C++ FS HL HM+ HQ
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 47.2 bits (113), Expect = 4e-07
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Query: 305 FYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSC 361
+ ++H C +K ++ S+L H++ H G K KC C F+
Sbjct: 3 SGSSGPDLEKRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 362 KRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQ 400
+T H + H ++C +C + +S +L H+K HQ
Sbjct: 60 SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 42.2 bits (100), Expect = 3e-05
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 521 FSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSR 577
E ++H C+K ++ L H++ H G + YKC C F+R
Sbjct: 3 SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59
Query: 578 KGRLTEHMKLHLG 590
LT H + H G
Sbjct: 60 SDELTRHYRKHTG 72
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 69.4 bits (171), Expect = 5e-15
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNL 192
++C +C + FS +LT H++ H G K C +C ++F+ H + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 193 CSKEFSSKSYLTEHMK 208
+ S +L +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 69.4 bits (171), Expect = 5e-15
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLC 328
+C +C + FS HL H++ H G + CD+C ++F R +H + +
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 329 SKEFSSKSYLTEHMK 343
+ S +L +
Sbjct: 65 EELLSKNYHLENEVA 79
Score = 68.7 bits (169), Expect = 1e-14
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLC 490
+C +C + FS HL H++ H G + C++C ++F R +H + + D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 491 SKEFSTKCSLTEHMK 505
+ S L +
Sbjct: 65 EELLSKNYHLENEVA 79
Score = 66.8 bits (164), Expect = 4e-14
Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLC 463
+C +C + FSR LT H++ H G K C++C ++F+ K H + + +
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 464 SKEFYRKQNLTKHMK 478
+ + +L +
Sbjct: 65 EELLSKNYHLENEVA 79
Score = 65.2 bits (160), Expect = 2e-13
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLC 220
+C +C + FS +LT H++ H G K + C++C ++F+ H + + D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 221 LKEYSNKIYLTEH 233
+ S +L
Sbjct: 65 EELLSKNYHLENE 77
Score = 62.5 bits (153), Expect = 1e-12
Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVL 165
++C +C + +S LT H++ H G + + CD+C ++F+ H + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 166 CSKEFSSKSYLTEHMKRH 183
+ S +L + R
Sbjct: 64 VEELLSKNYHLENEVARL 81
Score = 61.7 bits (151), Expect = 3e-12
Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKKCDL 516
++C +C + F R +LT H++ H G K CD+C ++F+ H + + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 517 CSKEFSCKRSVTEHMK 532
+ S + +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 61.4 bits (150), Expect = 4e-12
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLC 571
+C +C + FS +T H++ H G K CD+C ++F+ H + + D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 572 TKEFSRKGRLTEHMK 586
+ S+ L +
Sbjct: 65 EELLSKNYHLENEVA 79
Score = 61.4 bits (150), Expect = 4e-12
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDL 354
++C +C + F R +LT H++ H G K C +C ++F+ H + + D
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 355 CSKEFSCKRYVTEHMK 370
+ S ++ +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 57.1 bits (139), Expect = 1e-10
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNL 435
++C +C++ +S +LT H++ H G K C +C ++F+R H + + +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63
Query: 436 CSKEFSCKSHLKEHMQ 451
+ S HL+ +
Sbjct: 64 VEELLSKNYHLENEVA 79
Score = 57.1 bits (139), Expect = 1e-10
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 28/103 (27%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVL 246
++C +C + FS +LT H++ H E + CD +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACD---------------------------I 36
Query: 247 CSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQ 289
C ++F+R H + + + + S HL+ +
Sbjct: 37 CGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVA 79
Score = 56.4 bits (137), Expect = 2e-10
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLC 382
+C +C + FS +LT H++ H G K CD+C ++F+ H + + D
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64
Query: 383 LKEYSNKIYLTEH 395
+ S +L
Sbjct: 65 EELLSKNYHLENE 77
Score = 49.0 bits (118), Expect = 8e-08
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLH 588
+C +C + FS LT H++ H G + + CD+C ++F+R H +
Sbjct: 5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54
Score = 31.3 bits (72), Expect = 0.15
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
++C +C + FSR LT H++ H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 69.4 bits (171), Expect = 5e-15
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
+ C +C K F L+ H+ +H + C C K F KS + +H H G K +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 192 LCSKEFSSKSYLTEHMKLH 210
+C K FS S L H + H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80
Score = 67.1 bits (165), Expect = 3e-14
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVL 327
C +C K F S L H+ +H Y C C K F++K ++ KH +H G K +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 328 CSKEFSSKSYLTEHMKLHQG 347
C K FS S L H + H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 64.8 bits (159), Expect = 2e-13
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNL 462
C +C K F R L+ H+ +H + C C K F KS +K+H +H G +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 463 CSKEFYRKQNLTKHMKLHQG 482
C K F + NL H + H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 64.4 bits (158), Expect = 3e-13
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDL 300
C +C K F R L+ H+ +H + C C K F KS +K+H +H G +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 301 CSKEFYRKQNLTKHMKVHQG 320
C K F + NL H + H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 64.0 bits (157), Expect = 4e-13
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCV 164
+ C +C K + TL+ H+ +H R Y C C K F K + +H +H G K +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 165 LCSKEFSSKSYLTEHMKRHQG 185
+C K FS S L H ++H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 62.1 bits (152), Expect = 2e-12
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 457 TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KC 514
++ C +C K F R L+ H+ +H + C C K F K + +H +H G K KC
Sbjct: 1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 515 DLCSKEFSCKRSVTEHMKLHLG 536
+C K FS ++ H + H G
Sbjct: 61 QVCGKAFSQSSNLITHSRKHTG 82
Score = 61.3 bits (150), Expect = 4e-12
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK-NKC 352
++ C +C K F R L+ H+ +H + C C K F KS + +H +H G K +KC
Sbjct: 1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 353 DLCSKEFSCKRYVTEHMKLH 372
+C K FS + H + H
Sbjct: 61 QVCGKAFSQSSNLITHSRKH 80
Score = 58.6 bits (143), Expect = 3e-11
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 214 TYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKC 271
++ C +C K + L+ HL +H + C C K F +K + +H +H G K +KC
Sbjct: 1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 272 NLCSKEFSCKSHLKEHMQVHQG 293
+C K FS S+L H + H G
Sbjct: 61 QVCGKAFSQSSNLITHSRKHTG 82
Score = 58.6 bits (143), Expect = 3e-11
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 376 TYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKC 433
++ C +C K + L+ HL +H + C C K F +K + +H +H G K +KC
Sbjct: 1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 434 NLCSKEFSCKSHLKEHMQVHQG 455
+C K FS S+L H + H G
Sbjct: 61 QVCGKAFSQSSNLITHSRKHTG 82
Score = 57.4 bits (140), Expect = 8e-11
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCV 245
+ C +C K F S L+ H+ +H Y C C K + K + +H +H G K +KC
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 246 LCSKEFSRKRRLTEHMKLHLG 266
+C K FS+ L H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 57.0 bits (139), Expect = 1e-10
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
C +C K F +++ H+ +H + C C K F K + +H +H G + +KC +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 571 CTKEFSRKGRLTEHMKLHLG 590
C K FS+ L H + H G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 28.9 bits (66), Expect = 0.84
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
+ C +C K F R L+ H+ +H
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSD 26
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 68.7 bits (169), Expect = 1e-14
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNK---C 325
C +C K F HL H H G Y C +C F RK ++ H++ H G K C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 326 VLCSKEFSSKSYLTEHMK 343
C K FS +L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 66.7 bits (164), Expect = 6e-14
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKKK---C 487
C +C K F HL H H G Y C +C F RK ++ H++ H G K C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 488 DLCSKEFSTKCSLTEHMK 505
C K FS L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 66.0 bits (162), Expect = 1e-13
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNK--- 162
C++C K + + L H H G + Y C +C F K ++ H++ H G K
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 163 CVLCSKEFSSKSYLTEHMKR 182
C C K FS +L H+K+
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQ 87
Score = 66.0 bits (162), Expect = 1e-13
Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT---YKC 460
C +C K F L H H G K C +C F K + H++ H G Y C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 461 NLCSKEFYRKQNLTKHMK 478
C K F R +L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 65.6 bits (161), Expect = 2e-13
Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT---YKC 298
C +C K F L H H G K C +C F K + H++ H G Y C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 299 DLCSKEFYRKQNLTKHMK-VHQGMK 322
C K F R +L H+K VH G
Sbjct: 69 QSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 63.3 bits (155), Expect = 1e-12
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIKNK--- 351
C++C K F +L +H H G K C +C F K ++ H++ H G K
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 352 CDLCSKEFSCKRYVTEHMK 370
C C K FS ++ H+K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 62.1 bits (152), Expect = 2e-12
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKK--- 513
C +C K F +L +H H G K C +C F K ++ H++ H G K
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 514 CDLCSKEFSCKRSVTEHMK 532
C C K FS + H+K
Sbjct: 68 CQSCGKGFSRPDHLNGHIK 86
Score = 61.4 bits (150), Expect = 4e-12
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH---QEITYKC 217
C +C K F +L H H G K Y C +C F K ++ H++ H Y C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 218 DLCLKEYSNKIYLTEHLK 235
C K +S +L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 61.4 bits (150), Expect = 5e-12
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNK--- 432
C++C K + + +L H H G K C +C F RK R++ H++ H G K
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67
Query: 433 CNLCSKEFSCKSHLKEHMQ-VHQG 455
C C K FS HL H++ VH G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 60.2 bits (147), Expect = 1e-11
Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 33/117 (28%)
Query: 183 HQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGI 240
G C +C K F +L H H E Y C
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP---------------------- 39
Query: 241 KNKCVLCSKEFSRKRRLTEHMKLHLGIKNK---CNLCSKEFSCKSHLKEHMQ-VHQG 293
+C F RK R++ H++ H G K C C K FS HL H++ VH G
Sbjct: 40 -----VCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 59.0 bits (144), Expect = 3e-11
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR---YKC 568
C++C K F + H H G K C +C F K ++ H++ H G Y C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 569 DLCTKEFSRKGRLTEHMK 586
C K FSR L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 51.7 bits (125), Expect = 1e-08
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH---QEITYKC 379
C +C K F +L H H G K C +C F K ++ H++ H Y C
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68
Query: 380 DLCLKEYSNKIYLTEHLK 397
C K +S +L H+K
Sbjct: 69 QSCGKGFSRPDHLNGHIK 86
Score = 47.1 bits (113), Expect = 5e-07
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
C++C K F + L H H G + Y C +C F RK R++ H++ H G
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60
Score = 30.2 bits (69), Expect = 0.52
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
C++C K F L H H G
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSG 32
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 61.4 bits (150), Expect = 4e-12
Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 419 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-----YKCNLCSKEFYRKQN 472
+ H G K C+ C K F K L H + + + C+ C K F R+
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 473 LTKHMKLHQGIKK-KCDLCSKEF 494
+ +H G + +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 59.5 bits (145), Expect = 2e-11
Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 7/84 (8%)
Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-----KCVLCSKEFSSKS 174
+ + H G + Y C C K F K+ L H K + C C K F+ ++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 175 YLTEHMKRHQGIK-YKCNLCSKEF 197
+ H G +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 59.5 bits (145), Expect = 2e-11
Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 257 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-----YKCDLCSKEFYRKQN 310
+ H G K C+ C K F K L H + + + C C K F R+
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 311 LTKHMKVHQGMKN-KCVLCSKEF 332
+ +H G +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 55.2 bits (134), Expect = 5e-10
Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Query: 445 HLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-----KCDLCSKEFSTKC 498
+ H G Y C+ C K F +KQ L H K + C C K F+ +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 499 SLTEHMKLHQGIKK-KCDLCSKEF 521
++ H G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 52.5 bits (127), Expect = 5e-09
Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 230 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-----KCNLCSKEFSCKSH 283
+ H G K C C K F +K+ L H K + C+ C K F+ ++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 284 LKEHMQVHQG-ITYKCDLCSKEF 305
+ H G + +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 51.0 bits (123), Expect = 2e-08
Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 7/84 (8%)
Query: 499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-----KCDLCSKEFSTKH 552
S + H G K C C K F K+ + H K + C C K F+ ++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 553 TLTEHMKLHQGIR-YKCDLCTKEF 575
T+ H G + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 49.4 bits (119), Expect = 6e-08
Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Query: 176 LTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-----QEITYKCDLCLKEYSNKIY 229
+ H G K Y C+ C K F K L H K + + C C K ++ +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 230 LTEHLKLHQGIKN-KCVLCSKEF 251
+ H G +
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 49.4 bits (119), Expect = 6e-08
Identities = 16/82 (19%), Positives = 24/82 (29%), Gaps = 7/82 (8%)
Query: 310 NLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIKN-----KCDLCSKEFSCKR 363
+ + H G K C C K F K L H K + C C K F+ +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 364 YVTEHMKLHQ-EITYKCDLCLK 384
+ H + +
Sbjct: 62 TMARHADNCAGPDGVEGENSGP 83
Score = 48.3 bits (116), Expect = 1e-07
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 526 SVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-----YKCDLCTKEFSRKG 579
S + H G K C C K F K L H K + + C C K F+R+
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 580 RLTEHMKLHLG 590
+ H G
Sbjct: 62 TMARHADNCAG 72
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 6/70 (8%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-----YKCDLCSKEFSCKRYLTEHMKVHQGMKN 161
Y C C K + K L H K + + C C K F+ + + H G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75
Query: 162 -KCVLCSKEF 170
+
Sbjct: 76 VEGENSGPSS 85
Score = 43.7 bits (104), Expect = 6e-06
Identities = 17/82 (20%), Positives = 24/82 (29%), Gaps = 7/82 (8%)
Query: 366 TEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-----KCVLCSKEFSRKRRL 419
+ H E Y C C K + K L H K + C C K F+R+ +
Sbjct: 4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63
Query: 420 TEHMKLHLGIKN-KCNLCSKEF 440
H G +
Sbjct: 64 ARHADNCAGPDGVEGENSGPSS 85
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 60.6 bits (148), Expect = 8e-12
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KC 325
C K ++ SHLK H++ H G Y CD C +F R LT+H + H G + +C
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68
Query: 326 VLCSKEFSSKSYLTEHMKLH 345
C + FS +L HMK H
Sbjct: 69 QKCDRAFSRSDHLALHMKRH 88
Score = 60.2 bits (147), Expect = 1e-11
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KC 487
C K ++ SHLK H++ H G Y C+ C +F R LT+H + H G + +C
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68
Query: 488 DLCSKEFSTKCSLTEHMKLH 507
C + FS L HMK H
Sbjct: 69 QKCDRAFSRSDHLALHMKRH 88
Score = 57.5 bits (140), Expect = 1e-10
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 133 RYKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVL--CSKEFSSKSYLTEHMKRHQGIK-Y 188
C K ++ +L H++ H G K C C +F+ LT H ++H G + +
Sbjct: 7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 189 KCNLCSKEFSSKSYLTEHMKLH 210
+C C + FS +L HMK H
Sbjct: 67 QCQKCDRAFSRSDHLALHMKRH 88
Score = 56.8 bits (138), Expect = 2e-10
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMKN-K 162
C K Y+ L H++ H G + Y CD C +F+ LT H + H G + +
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 163 CVLCSKEFSSKSYLTEHMKRH 183
C C + FS +L HMKRH
Sbjct: 68 CQKCDRAFSRSDHLALHMKRH 88
Score = 56.4 bits (137), Expect = 2e-10
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 237 HQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQ 292
C K +++ L H++ H G K C+ C +F+ L H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 293 GIT-YKCDLCSKEFYRKQNLTKHMKVH 318
G ++C C + F R +L HMK H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 55.2 bits (134), Expect = 5e-10
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 399 HQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQ 454
C K +++ L H++ H G K C+ C +F+ L H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 455 GIT-YKCNLCSKEFYRKQNLTKHMKLH 480
G ++C C + F R +L HMK H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 52.1 bits (126), Expect = 6e-09
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 507 HQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLHQ 562
C K ++ + H++ H G K CD C +F+ LT H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 563 GIR-YKCDLCTKEFSRKGRLTEHMKLHL 589
G R ++C C + FSR L HMK H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 52.1 bits (126), Expect = 8e-09
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 182 RHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDL--CLKEYSNKIYLTEHLKLH 237
+ C K ++ S+L H++ H E Y CD C +++ LT H + H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 238 QGIKN-KCVLCSKEFSRKRRLTEHMKLHL 265
G + +C C + FSR L HMK H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 50.2 bits (121), Expect = 3e-08
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDL--CSKEFSTKCSLTEHMKLHQGIKK-K 513
C K + + +L H++ H G K CD C +F+ LT H + H G + +
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 514 CDLCSKEFSCKRSVTEHMKLHL 535
C C + FS + HMK H
Sbjct: 68 CQKCDRAFSRSDHLALHMKRHF 89
Score = 42.9 bits (102), Expect = 1e-05
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 345 HQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDL--CLKEYSNKIYLTEHLKLHQ 400
C K ++ ++ H++ H E Y CD C +++ LT H + H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 401 GIKN-KCVLCSKEFSRKRRLTEHMKLHL 427
G + +C C + FSR L HMK H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 40.2 bits (95), Expect = 1e-04
Identities = 30/142 (21%), Positives = 42/142 (29%), Gaps = 55/142 (38%)
Query: 313 KHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLH 372
K H C K ++ S+L H++ H G
Sbjct: 1 KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTG------------------------- 32
Query: 373 QEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKN- 431
E Y CD C +F+R LT H + H G +
Sbjct: 33 -EKPYHCDW-------------------------DGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 432 KCNLCSKEFSCKSHLKEHMQVH 453
+C C + FS HL HM+ H
Sbjct: 67 QCQKCDRAFSRSDHLALHMKRH 88
Score = 36.7 bits (86), Expect = 0.002
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSRKGRLTEHMKLHLG 590
C K ++ L H++ H G + Y CD C +F+R LT H + H G
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG 62
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 60.2 bits (147), Expect = 8e-12
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 257 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT---YKCDLCSKEFYRKQNLT 312
+ H G K +C +C F+ +K H+ + C C RK +L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 313 KHM-KVHQGMK 322
H+ K H
Sbjct: 63 VHLRKQHSYSG 73
Score = 58.3 bits (142), Expect = 3e-11
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 419 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT---YKCNLCSKEFYRKQNLT 474
+ H G K +C +C F+ +K H+ + C C RK +L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 475 KHM-KLHQGIK 484
H+ K H
Sbjct: 63 VHLRKQHSYSG 73
Score = 56.8 bits (138), Expect = 1e-10
Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Query: 283 HLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNK---CVLCSKEFSSKSYL 338
+ H G Y+C +C F + + H+ C C + KS L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 339 TEHM-KLHQGIK 349
H+ K H
Sbjct: 62 GVHLRKQHSYSG 73
Score = 56.4 bits (137), Expect = 2e-10
Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 445 HLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKKK---CDLCSKEFSTKCSL 500
+ H G Y+C +C F + + H+ C C + K L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 501 TEHM-KLHQGIK 511
H+ K H
Sbjct: 62 GVHLRKQHSYSG 73
Score = 55.2 bits (134), Expect = 4e-10
Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNK---CVLCSKEFSSKSYL 176
+ + H G + Y+C +C F+ + H+ C C + KS L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 177 TEHMKRH 183
H+++
Sbjct: 62 GVHLRKQ 68
Score = 55.2 bits (134), Expect = 4e-10
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 149 LTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK---YKCNLCSKEFSSKSYLT 204
+ H G K +C +C F+ + H+ + + C C + KS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 205 EHMK 208
H++
Sbjct: 63 VHLR 66
Score = 51.8 bits (125), Expect = 7e-09
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR---YKCDLCTKEFSRKGRLTEHM 585
+ H G K +C +C F+ T+ H+ + C C +RK L H+
Sbjct: 6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65
Query: 586 K 586
+
Sbjct: 66 R 66
Score = 51.0 bits (123), Expect = 1e-08
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 472 NLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKK---CDLCSKEFSCKRSV 527
+ + H G K +C +C F+ ++ H+ C C + K +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 528 TEHMK 532
H++
Sbjct: 62 GVHLR 66
Score = 50.2 bits (121), Expect = 2e-08
Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Query: 310 NLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIKNK---CDLCSKEFSCKRYV 365
+ + H G K +C +C F+ + H+ C C + K +
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 366 TEHMK 370
H++
Sbjct: 62 GVHLR 66
Score = 49.4 bits (119), Expect = 4e-08
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR---YKCDLCSKEFSCKRYLTEHM-KVHQGMK 160
Y+C +C ++ T+ H+ + C C + K L H+ K H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 48.7 bits (117), Expect = 8e-08
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 230 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNK---CNLCSKEFSCKSHLK 285
+ H G K +C +C F++ + H+ C C + KS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 286 EHMQ-VHQG 293
H++ H
Sbjct: 63 VHLRKQHSY 71
Score = 48.7 bits (117), Expect = 8e-08
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Query: 392 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNK---CNLCSKEFSCKSHLK 447
+ H G K +C +C F++ + H+ C C + KS L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 448 EHMQ-VHQG 455
H++ H
Sbjct: 63 VHLRKQHSY 71
Score = 47.9 bits (115), Expect = 2e-07
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNK---CDLCSKEFSTKHTL 554
S + H G K +C +C F+ ++ H+ C C + K L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 555 TEHMK 559
H++
Sbjct: 62 GVHLR 66
Score = 47.5 bits (114), Expect = 2e-07
Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Query: 176 LTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH---QEITYKCDLCLKEYSNKIYLT 231
+ H G K Y+C +C F+ + H+ + C C + K L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 232 EHL-KLHQGIK 241
HL K H
Sbjct: 63 VHLRKQHSYSG 73
Score = 41.4 bits (98), Expect = 3e-05
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Query: 203 LTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNK---CVLCSKEFSRKRRLT 258
+ H E Y+C +C ++ + H+ C C +RK L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 259 EHMK 262
H++
Sbjct: 63 VHLR 66
Score = 39.8 bits (94), Expect = 1e-04
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 368 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNK---CVLCSKEFSRKRRLTEHM 423
+ H E Y+C +C ++ + H+ C C +RK L H+
Sbjct: 6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65
Query: 424 K 424
+
Sbjct: 66 R 66
Score = 36.7 bits (86), Expect = 0.001
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 553 TLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
+ + H G + Y+C +C F++ G + H+
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 40
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 58.2 bits (142), Expect = 3e-11
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 419 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKH 476
H + K KC+ C F K +L H VH G Y+CN+C +F R NL H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 477 MKLHQGIK 484
++H G K
Sbjct: 65 TRIHSGEK 72
Score = 58.2 bits (142), Expect = 3e-11
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 282 SHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLT 339
H H + YKCD C F K NL H VH G K +C +C +F+ + L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 340 EHMKLHQGIK 349
H ++H G K
Sbjct: 63 THTRIHSGEK 72
Score = 57.5 bits (140), Expect = 6e-11
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 444 SHLKEHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLT 501
H H + YKC+ C F K NL H +H G K +C++C +F+ +L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 502 EHMKLHQGIK 511
H ++H G K
Sbjct: 63 THTRIHSGEK 72
Score = 55.5 bits (135), Expect = 3e-10
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 174 SYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLT 231
+ H K YKC+ C F K L H +H E Y+C++C +++ L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 232 EHLKLHQGIK 241
H ++H G K
Sbjct: 63 THTRIHSGEK 72
Score = 55.2 bits (134), Expect = 4e-10
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 120 HTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLT 177
H H + + YKCD C F K L H VH G K +C +C +F+ + L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 178 EHMKRHQGIK 187
H + H G K
Sbjct: 63 THTRIHSGEK 72
Score = 52.8 bits (128), Expect = 2e-09
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 229 YLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKE 286
+ H + K KC C F K L H +H G K +CN+C +F+ ++LK
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 287 HMQVHQG 293
H ++H G
Sbjct: 64 HTRIHSG 70
Score = 52.8 bits (128), Expect = 2e-09
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 391 YLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKE 448
+ H + K KC C F K L H +H G K +CN+C +F+ ++LK
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 449 HMQVHQG 455
H ++H G
Sbjct: 64 HTRIHSG 70
Score = 51.3 bits (124), Expect = 9e-09
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 528 TEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHM 585
H + K KCD C F K L H +H G + Y+C++C +F+R L H
Sbjct: 6 HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65
Query: 586 KLHLG 590
++H G
Sbjct: 66 RIHSG 70
Score = 50.9 bits (123), Expect = 1e-08
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 472 NLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTE 529
+ H + K KCD C F K +L H +H G K +C++C +F+ ++
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 530 HMKLHLGIK 538
H ++H G K
Sbjct: 64 HTRIHSGEK 72
Score = 50.1 bits (121), Expect = 2e-08
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
YKCD C + YK L H +H G + Y+C++C +F+ L H ++H G K
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 45.9 bits (110), Expect = 8e-07
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 336 SYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLT 393
+ H + K KCD C F K + H +H E Y+C++C +++ L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 394 EHLKLHQGIK 403
H ++H G K
Sbjct: 63 THTRIHSGEK 72
Score = 42.4 bits (101), Expect = 1e-05
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 368 HMKLHQEIT-----YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTE 421
H H +T YKCD C + K L H +H G K +C +C +F+R L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 422 HMKLHLGIK 430
H ++H G K
Sbjct: 64 HTRIHSGEK 72
Score = 36.3 bits (85), Expect = 0.002
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 552 HTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
H H + + YKCD C F KG L H +H G
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG 42
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 56.7 bits (138), Expect = 9e-11
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMKN 323
KC+ CS S K+ L+ H ++H +KC+ CS + + NL+KHMK G +
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 56.0 bits (136), Expect = 2e-10
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIK 484
KC+ CS S K+ L+ H ++H +KCN CS + + NL+KHMK G
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64
Score = 55.2 bits (134), Expect = 3e-10
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
KC+ CS K L H ++H + KC+ CS + +L++HMK G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64
Score = 54.8 bits (133), Expect = 5e-10
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
KC CS SSK+ L H + H + +KCN CS + S L++HMK
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 53.3 bits (129), Expect = 2e-09
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN 161
KC CS S K L H ++H R +KC+ CS + L++HMK G +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 52.1 bits (126), Expect = 5e-09
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
KC CS S+K L H ++H R +KC+ C+ + + L++HMK G
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 51.7 bits (125), Expect = 6e-09
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN 350
KC CS K L H ++H + KC CS + S L++HMK G +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 50.2 bits (121), Expect = 2e-08
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
KC CS S K L H ++H + KCN CS + S+L +HM+ G
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 50.2 bits (121), Expect = 2e-08
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
KC CS S K L H ++H + KCN CS + S+L +HM+ G
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 50.2 bits (121), Expect = 2e-08
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK 187
KC CS S K L H ++H + KC CS + S L++HMK+ G
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64
Score = 49.0 bits (118), Expect = 6e-08
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN 242
KC+ CS SSK+ L H ++H + +KC+ C + L++H+K G +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 49.0 bits (118), Expect = 6e-08
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN 539
KC CS S+K +L H ++H + KC+ CS + ++++HMK G +
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 45.2 bits (108), Expect = 1e-06
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH 372
KC CS SSK+ L H ++H + KC+ CS + +++HMK
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 41.3 bits (98), Expect = 3e-05
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN 269
KC C S+K L H ++H + KC CS + + L++HMK G +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 41.3 bits (98), Expect = 3e-05
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN 431
KC C S+K L H ++H + KC CS + + L++HMK G +
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65
Score = 30.9 bits (71), Expect = 0.15
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
KC C+ S K L H ++H
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCT 34
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 57.0 bits (138), Expect = 1e-10
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT----YKCDLCSKEFYRKQNLTKHMKVH 318
+C +C K+ L H + H + C+ C K F + ++ H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 55.9 bits (135), Expect = 2e-10
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT----YKCNLCSKEFYRKQNLTKHMKLHQGIKKKC 487
+C +C K+ L H + H + C C K F + ++ H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Score = 53.9 bits (130), Expect = 1e-09
Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK----KCDLCSKEFSTKCSLTEHMKLHQGIKKK 513
+C +C +K +L H + H C+ C K F S+ H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 514 C 514
Sbjct: 68 A 68
Score = 53.6 bits (129), Expect = 2e-09
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR----YKCDLCTKEFSRKGRLTEHMKLH 588
+C++C K +L H + H + C+ C K F + + H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 53.6 bits (129), Expect = 2e-09
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVH---QGMKN-KCVLCSKEFSSKSYLTEHMKLH 345
+C++C +K +L H + H C C K F + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 52.4 bits (126), Expect = 4e-09
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK----YKCNLCSKEFSSKSYLTEHMKLH 210
+C +C K+ L H ++H + C C K F + H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 52.4 bits (126), Expect = 5e-09
Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR----YKCDLCSKEFSCKRYLTEHMKVH 156
+C++C K +L H + H + C+ C K F + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 50.1 bits (120), Expect = 3e-08
Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK----KCDLCSKEFSCKRSVTEHMKLH 534
+C++C K SL H + H C+ C K F SV H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 47.8 bits (114), Expect = 2e-07
Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQEIT----YKCDLCLKEYSNKIYLTEHLKLH 237
+C +C K+ L H + H E + C+ C K + + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 42.4 bits (100), Expect = 2e-05
Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIKN----KCVLCSKEFSRKRRLTEHMKLH 426
+C++C K L H + H C C K F + + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 41.2 bits (97), Expect = 4e-05
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 351 KCDLCSKEFSCKRYVTEHMKLHQEIT----YKCDLCLKEYSNKIYLTEHLKLH 399
+C++C K + H + H E + C+ C K + + H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 32.0 bits (73), Expect = 0.076
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLH 588
+C++C +K L H + H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKH 30
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 56.4 bits (137), Expect = 1e-10
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGI---TYKCNLCSKEFYRKQNLTKHMKLHQGI 483
+C +CS+ ++ S+ H Y C C KEF RK N+T H+K+ I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 56.4 bits (137), Expect = 1e-10
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGI---TYKCDLCSKEFYRKQNLTKHMKVHQGM 321
+C +CS+ ++ S+ H Y C C KEF RK N+T H+K+ +
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 52.2 bits (126), Expect = 4e-09
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 162 KCVLCSKEFSSKSYLTEHM--KRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQEI 213
+C +CS+ ++ S H + +K Y C C KEF+ K +T H+K+ +I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 51.8 bits (125), Expect = 6e-09
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKV--HQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGI 348
Y+C +CS+ + N +H + +K C C KEF+ K +T H+K+ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 51.4 bits (124), Expect = 7e-09
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 458 YKCNLCSKEFYRKQNLTKHM--KLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGI 510
Y+C +CS+ + N +H + +K C C KEF+ K ++T H+K+ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 47.5 bits (114), Expect = 1e-07
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 107 YKCDLCSKEYSYKHTLTEHM--KLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGM 159
Y+C +CS+ Y++ H + ++ Y C C KEF+ K +T H+K+ +
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 47.5 bits (114), Expect = 2e-07
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 540 KCDLCSKEFSTKHTLTEHM--KLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLGI 591
+C +CS+ ++ H + ++ Y C C KEF+RK +T H+K+ I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 41.4 bits (98), Expect = 2e-05
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 324 KCVLCSKEFSSKSYLTEHM--KLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQEI 375
+C +CS+ ++ S H + +K C C KEF+ K +T H+K+ +I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 41.4 bits (98), Expect = 3e-05
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 486 KCDLCSKEFSTKCSLTEHM--KLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGI 537
+C +CS+ ++ + H + +K C C KEF+ K ++T H+K+ I
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 41.0 bits (97), Expect = 4e-05
Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 26/81 (32%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVL 246
Y+C +CS+ ++ S H + +K C
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSH-------------------------KRNVKVYPCPF 45
Query: 247 CSKEFSRKRRLTEHMKLHLGI 267
C KEF+RK +T H+K+ I
Sbjct: 46 CFKEFTRKDNMTAHVKIIHKI 66
Score = 39.1 bits (92), Expect = 2e-04
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 377 YKCDLCLKEYSNKIYLTEHL--KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGI 429
Y+C +C + Y++ H + +K C C KEF+RK +T H+K+ I
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 26.7 bits (60), Expect = 3.9
Identities = 4/23 (17%), Positives = 10/23 (43%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLH 588
Y+C +C++ ++ H
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTS 33
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 55.0 bits (133), Expect = 4e-10
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 439 EFSCKSHLKEHMQVHQGITYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFS 495
E ++L ++ Y C + C + F R LT+H+++H G K +C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 496 TKCSLTEHMKLH 507
LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 52.3 bits (126), Expect = 4e-09
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 277 EFSCKSHLKEHMQVHQGITYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFS 333
E ++L ++ Y C + C + F R LT+H+++H G K +C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 334 SKSYLTEHMKLH 345
+LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 47.3 bits (113), Expect = 3e-07
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVH 318
C + FS L H+++H G ++C +C + F R +LT H++ H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 46.1 bits (110), Expect = 7e-07
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVH 291
C + FSR LT H+++H G K +C +C + FS HL H++ H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 46.1 bits (110), Expect = 7e-07
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVH 453
C + FSR LT H+++H G K +C +C + FS HL H++ H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 45.8 bits (109), Expect = 8e-07
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 544 CSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLH 588
C + FS LT H+++H G + ++C +C + FSR LT H++ H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 45.4 bits (108), Expect = 1e-06
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLH 480
C + FS L H+++H G ++C +C + F R +LT H++ H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 45.4 bits (108), Expect = 1e-06
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
C + FS LT H++ H G K ++C +C + FS +LT H++ H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 41.9 bits (99), Expect = 2e-05
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVH 156
Y C + C + +S LT H+++H G + ++C +C + FS +LT H++ H
Sbjct: 20 YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 41.5 bits (98), Expect = 3e-05
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 196 EFSSKSYLTEHMKLHQEITYKCDL--CLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFS 252
E + L ++ Y C + C + +S LT H+++H G K +C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 253 RKRRLTEHMKLH 264
R LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 38.4 bits (90), Expect = 3e-04
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 466 EFYRKQNLTKHMKLHQGIKK--KCDL--CSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKE 520
E + NL ++ + C + C + FS LT H+++H G K +C +C +
Sbjct: 2 EPHPMNNLLNYVVPKM---RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58
Query: 521 FSCKRSVTEHMKLH 534
FS +T H++ H
Sbjct: 59 FSRSDHLTTHIRTH 72
Score = 38.1 bits (89), Expect = 4e-04
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 358 EFSCKRYVTEHMKLHQEITYKCDL--CLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFS 414
E + ++ Y C + C + +S LT H+++H G K +C +C + FS
Sbjct: 2 EPHPMNNLLNYVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 415 RKRRLTEHMKLH 426
R LT H++ H
Sbjct: 61 RSDHLTTHIRTH 72
Score = 28.4 bits (64), Expect = 1.3
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 547 EFSTKHTLTEHMKLHQGIRYKCDL--CTKEFSRKGRLTEHMKLHLGI 591
E + L ++ Y C + C + FSR LT H+++H G
Sbjct: 2 EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQ 47
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 56.3 bits (135), Expect = 5e-10
Identities = 19/102 (18%), Positives = 29/102 (28%), Gaps = 8/102 (7%)
Query: 469 RKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSV 527
+ + + G K +C CS + T LT HM + + S
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62
Query: 528 TEHMKLHLGIKN-------KCDLCSKEFSTKHTLTEHMKLHQ 562
L KC C F + L+ HM +
Sbjct: 63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 54.0 bits (129), Expect = 3e-09
Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 8/103 (7%)
Query: 279 SCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSY 337
S S K + + G + ++C CS + LT HM ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 338 LTEHMKLHQGIKN-------KCDLCSKEFSCKRYVTEHMKLHQ 373
L + KC C F + ++ HM +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 50.5 bits (120), Expect = 5e-08
Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 8/103 (7%)
Query: 117 SYKHTLTEHMKLHQG-IRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSY 175
S + + + G +++C CS + LT HM ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 176 ------LTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ 211
L E + K KC C F S L+ HM +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 49.4 bits (117), Expect = 1e-07
Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 8/100 (8%)
Query: 495 STKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHT 553
S+ S + + G K +C CS + +T HM ++ + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 554 LTEHMKLHQGIR-------YKCDLCTKEFSRKGRLTEHMK 586
L + KC C F L+ HM
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 49.0 bits (116), Expect = 2e-07
Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 7/85 (8%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKN----- 161
++C CS Y LT HM R + + +
Sbjct: 20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79
Query: 162 --KCVLCSKEFSSKSYLTEHMKRHQ 184
KC+ C F S L+ HM + +
Sbjct: 80 VLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 48.6 bits (115), Expect = 2e-07
Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 8/103 (7%)
Query: 230 LTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHM 288
+ + G +C CS + LT HM ++ + +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 289 QVHQGIT-------YKCDLCSKEFYRKQNLTKHMKVHQGMKNK 324
+ + KC C F Q+L+ HM + +
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109
Score = 47.5 bits (112), Expect = 6e-07
Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 8/98 (8%)
Query: 392 LTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHM 450
+ + G +C CS + LT HM ++ + +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 451 QVHQGIT-------YKCNLCSKEFYRKQNLTKHMKLHQ 481
+ + KC C F Q+L+ HM +
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 47.5 bits (112), Expect = 6e-07
Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 8/98 (8%)
Query: 149 LTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHM 207
+ + G +C CS + + LT HM + + +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66
Query: 208 KLHQ-------EITYKCDLCLKEYSNKIYLTEHLKLHQ 238
L + + KC C + + L+ H+ +
Sbjct: 67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 46.7 bits (110), Expect = 1e-06
Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 8/103 (7%)
Query: 414 SRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKE------ 466
S + + G +C CS + L HM +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 467 FYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQ 508
RK++L + K KC C F + L+ HM +
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 45.5 bits (107), Expect = 3e-06
Identities = 18/100 (18%), Positives = 28/100 (28%), Gaps = 8/100 (8%)
Query: 333 SSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIY 391
SS S + + G +C CS + +T HM +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 392 LTEHLKLHQGIKN-------KCVLCSKEFSRKRRLTEHMK 424
L + KC+ C F + L+ HM
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 35.9 bits (82), Expect = 0.007
Identities = 13/70 (18%), Positives = 19/70 (27%), Gaps = 1/70 (1%)
Query: 522 SCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGR 580
S S + + G +C CS + T LT HM R ++
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 581 LTEHMKLHLG 590
L
Sbjct: 62 KPRKRSLLEM 71
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 54.8 bits (133), Expect = 5e-10
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 257 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKH 314
+ +H G K C C K FS S L +H +VH G YKC C K F + L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 315 MKVHQGMK 322
++H
Sbjct: 62 QRIHTSGP 69
Score = 54.4 bits (132), Expect = 6e-10
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 419 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKH 476
+ +H G K C C K FS S L +H +VH G YKC C K F + L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 477 MKLHQGIK 484
++H
Sbjct: 62 QRIHTSGP 69
Score = 52.5 bits (127), Expect = 3e-09
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 122 LTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEH 179
+ +H G + Y C C K FS L +H +VH G K KC+ C K FS S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 180 MKRHQGIK 187
+ H
Sbjct: 62 QRIHTSGP 69
Score = 52.1 bits (126), Expect = 4e-09
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 176 LTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEH 233
+ H G K Y C C K FS S L +H ++H E YKC C K +S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 234 LKLHQGIK 241
++H
Sbjct: 62 QRIHTSGP 69
Score = 51.3 bits (124), Expect = 9e-09
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 230 LTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEH 287
+ +H G K CV C K FSR L +H ++H G K KC C K FS S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 288 MQVHQG 293
++H
Sbjct: 62 QRIHTS 67
Score = 51.3 bits (124), Expect = 9e-09
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 392 LTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEH 449
+ +H G K CV C K FSR L +H ++H G K KC C K FS S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 450 MQVHQG 455
++H
Sbjct: 62 QRIHTS 67
Score = 49.4 bits (119), Expect = 4e-08
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 284 LKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEH 341
+H G Y C C K F R L +H +VH G K KC+ C K FS S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 342 MKLHQGIK 349
++H
Sbjct: 62 QRIHTSGP 69
Score = 48.6 bits (117), Expect = 8e-08
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
Y C C K +S L +H ++H G + YKC C K FS L H ++H
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69
Score = 48.2 bits (116), Expect = 1e-07
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 446 LKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEH 503
+H G Y C C K F R L +H ++H G K KC C K FS L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 504 MKLHQGIK 511
++H
Sbjct: 62 QRIHTSGP 69
Score = 47.8 bits (115), Expect = 2e-07
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 528 TEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHM 585
+ +H G K C C K FS L +H ++H G + YKC C K FS+ L H
Sbjct: 3 SGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62
Query: 586 KLHLG 590
++H
Sbjct: 63 RIHTS 67
Score = 47.1 bits (113), Expect = 3e-07
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 473 LTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEH 530
+ +H G K C C K FS L +H ++H G K KC C K FS + H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 531 MKLHLGIK 538
++H
Sbjct: 62 QRIHTSGP 69
Score = 44.8 bits (107), Expect = 2e-06
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 500 LTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEH 557
+ +H G K C C K FS + +H ++H G K KC C K FS L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 558 MKLHQG 563
++H
Sbjct: 62 QRIHTS 67
Score = 42.8 bits (102), Expect = 1e-05
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 338 LTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEH 395
+ +H G K C C K FS + +H ++H E YKC C K +S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 396 LKLHQGIK 403
++H
Sbjct: 62 QRIHTSGP 69
Score = 41.7 bits (99), Expect = 2e-05
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 366 TEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHM 423
+ +H E Y C C K +S L +H ++H G K KC+ C K FS+ L H
Sbjct: 3 SGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62
Query: 424 KLHLGIK 430
++H
Sbjct: 63 RIHTSGP 69
Score = 34.4 bits (80), Expect = 0.008
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 554 LTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
+ +H G + Y C C K FSR L +H ++H G
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 39
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 53.8 bits (130), Expect = 2e-09
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCD--LCSKEFYRKQNLTKHMKVHQGMKN-KCVLCS 329
C K F + LK H H Y+C C K F L +H KVH G K CS
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 330 KEFSSKSYLTEHMK 343
+ + +H+
Sbjct: 69 FVGKTWTLYLKHVA 82
Score = 53.4 bits (129), Expect = 2e-09
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCN--LCSKEFYRKQNLTKHMKLHQGIKK-KCDLCS 491
C K F + LK H H Y+C C K F L +H K+H G K D CS
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 492 KEFSTKCSLTEHMK 505
T +H+
Sbjct: 69 FVGKTWTLYLKHVA 82
Score = 51.5 bits (124), Expect = 1e-08
Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 134 YKCDL--CSKEFSCKRYLTEHMKVHQGMK-NKC--VLCSKEFSSKSYLTEHMKRHQGIK- 187
Y C C K F L H H +C C K FS S L H K H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 188 YKCNLCSKEFSSKSYLTEHMK 208
K + CS + + +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 51.5 bits (124), Expect = 1e-08
Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCD--LCSKEFSCKRYLTEHMKVHQGMKN 161
Y C C K + + L H H Y+C C K FS L H KVH G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 162 -KCVLCSKEFSSKSYLTEHMKR 182
K CS + + +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAE 83
Score = 46.1 bits (110), Expect = 8e-07
Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 296 YKCDL--CSKEFYRKQNLTKHMKVHQGMK-NKC--VLCSKEFSSKSYLTEHMKLHQGIKN 350
Y C C K F + L H H +C C K FS S L H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 351 -KCDLCSKEFSCKRYVTEHMK 370
K D CS +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 45.7 bits (109), Expect = 1e-06
Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 458 YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIKK 512
Y C+ C K F + L H H +C C K FS L H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 513 -KCDLCSKEFSCKRSVTEHMK 532
K D CS +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 43.0 bits (102), Expect = 1e-05
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 215 YKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKC--VLCSKEFSRKRRLTEHMKLHLGIKN 269
Y C C K + L H H +C C K FS RL H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 270 -KCNLCSKEFSCKSHLKEHMQ 289
K + CS + +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 43.0 bits (102), Expect = 1e-05
Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 377 YKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKC--VLCSKEFSRKRRLTEHMKLHLGIKN 431
Y C C K + L H H +C C K FS RL H K+H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 432 -KCNLCSKEFSCKSHLKEHMQ 451
K + CS + +H+
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVA 82
Score = 42.6 bits (101), Expect = 1e-05
Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGIR-YKCDLCT 572
C K F + H H +C C K FS L H K+H G K D C+
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 573 KEFSRKGRLTEHMK 586
+H+
Sbjct: 69 FVGKTWTLYLKHVA 82
Score = 36.4 bits (85), Expect = 0.002
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 544 CSKEFSTKHTLTEHMKLHQGIR-YKCD--LCTKEFSRKGRLTEHMKLHLG 590
C K F + L H H Y+C C K FS RL H K+H G
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 52.8 bits (128), Expect = 3e-09
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 257 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKH 314
+ KC+ C K FS S L +H + H G YKCD C K F ++ +L H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 315 MKVHQGMK 322
+VH G
Sbjct: 66 HRVHTGSG 73
Score = 52.4 bits (127), Expect = 4e-09
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 419 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKH 476
+ KC+ C K FS S L +H + H G YKC+ C K F ++ +L H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 477 MKLHQGIK 484
++H G
Sbjct: 66 HRVHTGSG 73
Score = 52.1 bits (126), Expect = 5e-09
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 281 KSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
+ YKCD C K F +L+KH + H G K KC C K F +S+L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 339 TEHMKLHQGIK 349
H ++H G
Sbjct: 63 IGHHRVHTGSG 73
Score = 52.1 bits (126), Expect = 5e-09
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 172 SKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIY 229
S + + + YKC+ C K FS S L++H + H E YKCD C K + + +
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 230 LTEHLKLHQGIK 241
L H ++H G
Sbjct: 62 LIGHHRVHTGSG 73
Score = 51.7 bits (125), Expect = 7e-09
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTE 178
+ + R YKCD C K FS L++H + H G K KC C K F +S+L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 179 HMKRHQGIK-YK 189
H + H G
Sbjct: 65 HHRVHTGSGPSS 76
Score = 50.5 bits (122), Expect = 2e-08
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 443 KSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSL 500
+ YKC+ C K F +L+KH + H G K KCD C K F + L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 501 TEHMKLHQGIK 511
H ++H G
Sbjct: 63 IGHHRVHTGSG 73
Score = 49.0 bits (118), Expect = 6e-08
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 230 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEH 287
+ + KC C K FS L++H + H G K KC+ C K F +SHL H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 288 MQVHQG 293
+VH G
Sbjct: 66 HRVHTG 71
Score = 49.0 bits (118), Expect = 6e-08
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 392 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEH 449
+ + KC C K FS L++H + H G K KC+ C K F +SHL H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Query: 450 MQVHQG 455
+VH G
Sbjct: 66 HRVHTG 71
Score = 45.9 bits (110), Expect = 7e-07
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 526 SVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTE 583
S + KCD C K FS L++H + H G + YKCD C K F ++ L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 584 HMKLHLG 590
H ++H G
Sbjct: 65 HHRVHTG 71
Score = 45.9 bits (110), Expect = 8e-07
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 472 NLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTE 529
+ + + ++ KCD C K FS L++H + H G K KCD C K F + +
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 530 HMKLHLGIK 538
H ++H G
Sbjct: 65 HHRVHTGSG 73
Score = 45.5 bits (109), Expect = 1e-06
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
YKCD C K +S+ L++H + H G + YKCD C K F + +L H +VH G
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73
Score = 44.0 bits (105), Expect = 4e-06
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTE 556
S + ++ KCD C K FS +++H + H G K KCD C K F + L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 557 HMKLHQG 563
H ++H G
Sbjct: 65 HHRVHTG 71
Score = 43.2 bits (103), Expect = 7e-06
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 334 SKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIY 391
S + + KCD C K FS +++H + H E YKCD C K + + +
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 392 LTEHLKLHQGIK 403
L H ++H G
Sbjct: 62 LIGHHRVHTGSG 73
Score = 37.4 bits (88), Expect = 8e-04
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 366 TEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHM 423
+ YKCD C K +S+ L++H + H G K KC C K F ++ L H
Sbjct: 7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH 66
Query: 424 KLHLGIK 430
++H G
Sbjct: 67 RVHTGSG 73
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 49.9 bits (120), Expect = 4e-08
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 134 YKCDL--CSKEFSCKRYLTEHMKV-HQGMK-NKC--VLCSKEFSSKSYLTEHMKRHQGIK 187
CD C + FS ++YL H K H K C C K F+ K +L EHMK H +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 188 -YKCNLCSKEF 197
Y C
Sbjct: 68 DYICEFSGPSS 78
Score = 47.2 bits (113), Expect = 3e-07
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 166 CSKEFSSKSYLTEHMK-RHQGIK-YKCN--LCSKEFSSKSYLTEHMKLHQ-EITYKCDLC 220
C + FS++ YL H K +H K + C C K F+ K +L EHMKLH Y C+
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Score = 47.2 bits (113), Expect = 3e-07
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 409 CSKEFSRKRRLTEHMKL-HLGIK-NKCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCNLC 463
C + FS ++ L H K H+ K C C K F+ K HLKEHM++H Y C
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Query: 464 SKEF 467
Sbjct: 75 GPSS 78
Score = 47.2 bits (113), Expect = 4e-07
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 296 YKCDL--CSKEFYRKQNLTKHMKV-HQGMK-NKC--VLCSKEFSSKSYLTEHMKLHQGIK 349
CD C + F +Q L H K H K C C K F+ K +L EHMKLH +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 350 N-KCDLCSKEF 359
+ C+
Sbjct: 68 DYICEFSGPSS 78
Score = 47.2 bits (113), Expect = 4e-07
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 247 CSKEFSRKRRLTEHMKL-HLGIK-NKCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCDLC 301
C + FS ++ L H K H+ K C C K F+ K HLKEHM++H Y C+
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Query: 302 SKEF 305
Sbjct: 75 GPSS 78
Score = 46.8 bits (112), Expect = 4e-07
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 432 KCNL--CSKEFSCKSHLKEHMQV-HQGI-TYKCN--LCSKEFYRKQNLTKHMKLHQGIKK 485
C+ C + FS + +L H + H ++ C C K F K++L +HMKLH +
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 486 -KCDLCSKEF 494
C+
Sbjct: 69 YICEFSGPSS 78
Score = 45.6 bits (109), Expect = 1e-06
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 458 YKCNL--CSKEFYRKQNLTKHMKL-HQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIK 511
C+ C + F +Q L H K H K C C K F+ K L EHMKLH +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 512 K-KCDLCSKEF 521
C+
Sbjct: 68 DYICEFSGPSS 78
Score = 43.3 bits (103), Expect = 7e-06
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 107 YKCDL--CSKEYSYKHTLTEHMKL-HQGIR-YKCD--LCSKEFSCKRYLTEHMKVHQGMK 160
CD C + +S + L H K H + + C C K F+ K++L EHMK+H +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 161 N-KCVLCSKEF 170
+ C
Sbjct: 68 DYICEFSGPSS 78
Score = 40.6 bits (96), Expect = 6e-05
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 513 KCDL--CSKEFSCKRSVTEHMKL-HLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGIR- 565
CD C + FS ++ + H K H+ K C C K F+ K L EHMKLH R
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 566 YKCDLCTKEF 575
Y C+
Sbjct: 69 YICEFSGPSS 78
Score = 39.8 bits (94), Expect = 1e-04
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 540 KCDL--CSKEFSTKHTLTEHMKL-HQGIR-YKCD--LCTKEFSRKGRLTEHMKLHLG 590
CD C + FS + L H K H + + C C K F+ K L EHMKLH
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Score = 39.8 bits (94), Expect = 1e-04
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 486 KCDL--CSKEFSTKCSLTEHMKL-HQGIKK-KCD--LCSKEFSCKRSVTEHMKLHLGIKN 539
CD C + FS + L H K H K C C K F+ K+ + EHMKLH ++
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 540 -KCDLCSKEF 548
C+
Sbjct: 69 YICEFSGPSS 78
Score = 38.7 bits (91), Expect = 3e-04
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 188 YKCNL--CSKEFSSKSYLTEHMKLHQ--EITYKCD--LCLKEYSNKIYLTEHLKLHQGIK 241
C+ C + FS++ YL H K + ++ C C K ++ K +L EH+KLH +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 242 N-KCVLCSKEF 251
+ C
Sbjct: 68 DYICEFSGPSS 78
Score = 38.3 bits (90), Expect = 4e-04
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 328 CSKEFSSKSYLTEHMKL-HQGIK-NKCD--LCSKEFSCKRYVTEHMKLHQ-EITYKCDLC 382
C + FS++ YL H K H K C C K F+ K+++ EHMKLH Y C+
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74
Score = 31.8 bits (73), Expect = 0.088
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 351 KCDL--CSKEFSCKRYVTEHMKLHQ--EITYKCD--LCLKEYSNKIYLTEHLKLHQGIKN 404
CD C + FS ++Y+ H K + ++ C C K ++ K +L EH+KLH ++
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 405 -KCVLCSKEF 413
C
Sbjct: 69 YICEFSGPSS 78
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 48.7 bits (115), Expect = 2e-07
Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 122 LTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMK 181
+ + Y+C LC+ + S H ++ + C CS F S EH
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHES 63
Query: 182 RHQGIKYKCNLCSKEFSSKSYLTEH-MKLHQE 212
+ + K C C + F S + H +++H +
Sbjct: 64 KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQ 95
Score = 44.1 bits (103), Expect = 8e-06
Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Query: 98 KKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQ 157
+ Y+C LC+ + S H +L + C CS F EH +
Sbjct: 8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCE 66
Query: 158 GMKNKCVLCSKEFSSKSYLTEHMKR 182
K C+ C + F S + H
Sbjct: 67 YKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 43.4 bits (101), Expect = 1e-05
Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Query: 282 SHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEH 341
S V Y+C LC+ + H ++ + C CS F S EH
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61
Query: 342 MKLHQGIKNKCDLCSKEFSCKRYVTEH-MKLHQE 374
+ K C C + F + H +++H +
Sbjct: 62 ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQ 95
Score = 43.0 bits (100), Expect = 2e-05
Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 1/89 (1%)
Query: 444 SHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEH 503
S V Y+C LC+ + H +L + C CS F + EH
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61
Query: 504 MKLHQGIKKKCDLCSKEFSCKRSVTEHMK 532
+ K C C + F S+ H
Sbjct: 62 ESKCEYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 43.0 bits (100), Expect = 2e-05
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCS 464
+C LC+ + S H +L C CS F +EH + C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 465 KEFYRKQNLTKHMK 478
+ F ++ +H
Sbjct: 77 RTFKSSFSIWRHQV 90
Score = 42.6 bits (99), Expect = 3e-05
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLC 247
Y+C LC+ + SS H +L + C C + + EH + K C+ C
Sbjct: 17 YQCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHESKCEYKKLTCLEC 75
Query: 248 SKEFSRKRRLTEHMK 262
+ F + H
Sbjct: 76 MRTFKSSFSIWRHQV 90
Score = 42.6 bits (99), Expect = 3e-05
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCS 329
+C LC+ + S H ++ + C CS F+ + +H + K C+ C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 330 KEFSSKSYLTEHMK 343
+ F S + H
Sbjct: 77 RTFKSSFSIWRHQV 90
Score = 42.2 bits (98), Expect = 3e-05
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCS 302
+C LC+ + S H +L C CS F +EH + C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 303 KEFYRKQNLTKH-MKVHQ 319
+ F ++ +H ++VH
Sbjct: 77 RTFKSSFSIWRHQVEVHN 94
Score = 41.8 bits (97), Expect = 5e-05
Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCS 491
+C LC+ + S H ++ + C CS F+ + +H + K C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 492 KEFSTKCSLTEHMK 505
+ F + S+ H
Sbjct: 77 RTFKSSFSIWRHQV 90
Score = 41.0 bits (95), Expect = 8e-05
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 1/85 (1%)
Query: 149 LTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMK 208
+ V +C LC+ + SS H + + C CS F S EH
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHES 63
Query: 209 LHQEITYKCDLCLKEYSNKIYLTEH 233
+ C C++ + + + H
Sbjct: 64 KCEYKKLTCLECMRTFKSSFSIWRH 88
Score = 39.9 bits (92), Expect = 2e-04
Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 1/86 (1%)
Query: 310 NLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHM 369
+ V +C LC+ + SS H +L + C CS F EH
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62
Query: 370 KLHQEITYKCDLCLKEYSNKIYLTEH 395
+ C C++ + + + H
Sbjct: 63 SKCEYKKLTCLECMRTFKSSFSIWRH 88
Score = 39.1 bits (90), Expect = 4e-04
Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCT 572
+C LC+ + S H +L C CS F + EH + + C C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 573 KEFSRKGRLTEHMK 586
+ F + H
Sbjct: 77 RTFKSSFSIWRHQV 90
Score = 38.3 bits (88), Expect = 0.001
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 351 KCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCS 410
+C LC+ + S H +L + C C + + EH + K C+ C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76
Query: 411 KEFSRKRRLTEHMK 424
+ F + H
Sbjct: 77 RTFKSSFSIWRHQV 90
Score = 27.9 bits (61), Expect = 3.5
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEH-MKVHQ 157
C CS + EH + + C C + F + H ++VH
Sbjct: 43 AVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 47.1 bits (113), Expect = 2e-07
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHM-KLHQG 482
C +C++ F+ + HLK H + H Y C LC++ F R+ L +H K+H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 45.9 bits (110), Expect = 4e-07
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHM-KVHQG 320
C +C++ F+ + HLK H + H Y C LC++ F R+ L +H K+H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 44.4 bits (106), Expect = 2e-06
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQ-VHQG 293
C +C++ F+R+ L H + H K C LC++ F+ + L H Q +H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 44.4 bits (106), Expect = 2e-06
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQ-VHQG 455
C +C++ F+R+ L H + H K C LC++ F+ + L H Q +H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 44.0 bits (105), Expect = 3e-06
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHM-KLHQG 347
+ C++C++ F R+++L +H + H K C LC++ F+ + L H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 43.6 bits (104), Expect = 3e-06
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKR-HQG 185
+ C++C++ F+ + +L H + H K C LC++ F+ + L H ++ H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 42.1 bits (100), Expect = 1e-05
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHM-KLHQG 509
+ C +C++ F R+++L +H + H K C LC++ F+ + L H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 41.3 bits (98), Expect = 2e-05
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHM-KVHQG 158
+ C++C++ ++ + L H + H + Y C LC++ F+ + L H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 40.9 bits (97), Expect = 3e-05
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHM-KLHLG 590
C++C++ F+ + L H + H + Y C LC + F+R+ L H K+H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 39.8 bits (94), Expect = 8e-05
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHL-KLHQG 239
+ C +C++ F+ + +L H + H E Y C LC + ++ + L H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 36.7 bits (86), Expect = 0.001
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMK 370
C +C++ F+ + +L H + H K C LC++ F+ + + H +
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51
Score = 35.5 bits (83), Expect = 0.002
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHM-KLHLG 536
C++C++ F+ + L H + H K C LC++ F+ + + H K+H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 34.0 bits (79), Expect = 0.008
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHM-KLHLG 428
+ C++C + ++ + +L H + H K C LC++ F+R+ L H K+H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 30.5 bits (70), Expect = 0.14
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
+ C++CT+ F+R+ L H + H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 44.2 bits (103), Expect = 1e-05
Identities = 29/120 (24%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Query: 90 ESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSC-KRY 148
ES KK L G + +E H LT K K + + + Y
Sbjct: 3 ESDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSY 62
Query: 149 LTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMK 208
L + + C LC FSS L +H++ + C +C KEF+S +H+
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVC 121
Score = 43.0 bits (100), Expect = 3e-05
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 232 EHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKS-HLKEHMQV 290
++L H+GI + +E R +LT K + K + + + +S +L +
Sbjct: 12 KYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 291 HQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMK 343
+ C LC F +L +H++ + K C +C KEF+S +H+
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHVC 121
Score = 42.6 bits (99), Expect = 4e-05
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 394 EHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKS-HLKEHMQV 452
++L H+GI + +E R +LT K + K + + + +S +L +
Sbjct: 12 KYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 453 HQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMK 505
+ C LC F +L +H++ + K C +C KEF++ S +H+
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVC 121
Score = 41.5 bits (96), Expect = 9e-05
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Query: 277 EFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFS-SK 335
E S K+++ H+GI + +E R LT K K ++ + +
Sbjct: 3 ESDVDSGSKKYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60
Query: 336 SYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEH 395
SYL + + C LC FS + +H++ E T C +C KE+++ +H
Sbjct: 61 SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDH 119
Query: 396 LK 397
+
Sbjct: 120 VC 121
Score = 41.5 bits (96), Expect = 9e-05
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 124 EHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFS-SKSYLTEHMKR 182
+++ H+GI + +E LT K K ++ + + SYL +
Sbjct: 12 KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 183 HQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLK 235
++ C LC FSS L +H++ E T C +C KE+++ +H+
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVC 121
Score = 38.8 bits (89), Expect = 8e-04
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 169 EFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMK-LHQEITYKCDLCLKEYSNK 227
E S +++ H+GI ++ +E LT K L + I +
Sbjct: 3 ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60
Query: 228 IYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEH 287
YL L + C LC FS L +H++ K C +C KEF+ +H
Sbjct: 61 SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDH 119
Query: 288 MQVHQGIT 295
+ I
Sbjct: 120 VCKKHNIC 127
Score = 38.4 bits (88), Expect = 0.001
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 4/113 (3%)
Query: 475 KHMKLHQGIKKKCDLCSKEFSTKCSLTEHMK-LHQGIKKKCDLCSKEFSCKRSVTEHMKL 533
K++ H+GI + +E LT K L + I K + + +
Sbjct: 12 KYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69
Query: 534 HLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMK 586
+ C LC FS+ +L +H++ + C +C KEF+ +H+
Sbjct: 70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVC 121
Score = 38.0 bits (87), Expect = 0.002
Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Query: 421 EHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLH 480
+++ H GI L + E ++ + I + L + +
Sbjct: 12 KYLSNHKGIFIHVTL-EELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASK 70
Query: 481 QGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMK 532
+ C LC FS+ SL +H++ + K C +C KEF+ S +H+
Sbjct: 71 AISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVC 121
Score = 37.6 bits (86), Expect = 0.002
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Query: 98 KKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQ 157
+K+L + I + L + ++ C LC FS L +H++ +
Sbjct: 39 QKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE 98
Query: 158 GMKNKCVLCSKEFSSKSYLTEHMKRHQGI 186
K C +C KEF+S +H+ + I
Sbjct: 99 HTK-VCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 36.8 bits (84), Expect = 0.004
Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 2/127 (1%)
Query: 331 EFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKI 390
E S +++ H+GI L + + E +L + I +
Sbjct: 3 ESDVDSGSKKYLSNHKGIFIHVTL-EELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESS 61
Query: 391 YLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHM 450
YL L + C LC FS L +H++ K C +C KEF+ +H+
Sbjct: 62 YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHV 120
Query: 451 QVHQGIT 457
I
Sbjct: 121 CKKHNIC 127
Score = 36.1 bits (82), Expect = 0.008
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 2/112 (1%)
Query: 259 EHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVH 318
+++ H GI L + E ++ + I + L + +
Sbjct: 12 KYLSNHKGIFIHVTL-EELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASK 70
Query: 319 QGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMK 370
+ C LC FSS L +H++ + K C +C KEF+ +H+
Sbjct: 71 AISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHVC 121
Score = 28.0 bits (61), Expect = 4.4
Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Query: 493 EFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKH 552
E +++ H+GI + +E +T K + K + + + +
Sbjct: 3 ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60
Query: 553 T-LTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKLH 588
+ L + ++ C LC FS L +H++
Sbjct: 61 SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT 97
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 162 KCVLCSKEFSSKSYLTEHMKR-HQGIK-YKCNLCSKEFSS 199
C C K FS +L H+K+ H + +KC + SS
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 37.9 bits (89), Expect = 3e-04
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 432 KCNLCSKEFSCKSHLKEHMQ-VHQG-ITYKCNLCSKEF 467
C C K FS HL H++ VH +KC +
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 37.9 bits (89), Expect = 3e-04
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 270 KCNLCSKEFSCKSHLKEHMQ-VHQG-ITYKCDLCSKEF 305
C C K FS HL H++ VH +KC +
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 36.8 bits (86), Expect = 8e-04
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMK-LHQ-EITYKCDLCLKEYSN 226
K Y C C K FS +L H+K +H E +KC + + S+
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 36.4 bits (85), Expect = 0.001
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 296 YKCDLCSKEFYRKQNLTKHMK-VHQGMK-NKCVLCSKEFSS 334
Y C C K F R +L H+K VH + +KC + SS
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 107 YKCDLCSKEYSYKHTLTEHMK-LHQGIR-YKCDLCSKEFS 144
Y C C K +S L H+K +H R +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 36.4 bits (85), Expect = 0.001
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 458 YKCNLCSKEFYRKQNLTKHMK-LHQGIKK-KCDLCSKEFST 496
Y C C K F R +L H+K +H + KC + S+
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 540 KCDLCSKEFSTKHTLTEHMK-LHQGIR-YKCDLCTKEFS 576
C C K FS L H+K +H R +KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 35.2 bits (82), Expect = 0.003
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 134 YKCDLCSKEFSCKRYLTEHMK-VHQGMK-NKCVLCSKEFSS 172
Y C C K FS +L H+K VH + +KC + SS
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 32.9 bits (76), Expect = 0.018
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 324 KCVLCSKEFSSKSYLTEHMK-LHQGIK-NKCDLCSKEFS 360
C C K FS +L H+K +H + +KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 31.8 bits (73), Expect = 0.042
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 243 KCVLCSKEFSRKRRLTEHMK-LHLGIK-NKCNLCSKEFS 279
C C K FSR L H+K +H + +KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 31.8 bits (73), Expect = 0.042
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 405 KCVLCSKEFSRKRRLTEHMK-LHLGIK-NKCNLCSKEFS 441
C C K FSR L H+K +H + +KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 31.4 bits (72), Expect = 0.068
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 486 KCDLCSKEFSTKCSLTEHMK-LHQGIKK-KCDLCSKEFS 522
C C K FS L H+K +H + KC + S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 29.1 bits (66), Expect = 0.51
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 513 KCDLCSKEFSCKRSVTEHMK-LHLGIK-NKCDLCSKEFST 550
C C K FS + H+K +H + +KC + S+
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 28.7 bits (65), Expect = 0.53
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 566 YKCDLCTKEFSRKGRLTEHMK 586
Y C C K FSR L H+K
Sbjct: 13 YICQSCGKGFSRPDHLNGHIK 33
Score = 27.2 bits (61), Expect = 1.9
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 215 YKCDLCLKEYSNKIYLTEHLK-LHQGIK-NKCVLCSKEFS 252
Y C C K +S +L H+K +H + +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 27.2 bits (61), Expect = 1.9
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 377 YKCDLCLKEYSNKIYLTEHLK-LHQGIK-NKCVLCSKEFS 414
Y C C K +S +L H+K +H + +KC + S
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 27.2 bits (61), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 351 KCDLCSKEFSCKRYVTEHMK-LHQ-EITYKCDLCLKEYSN 388
C C K FS ++ H+K +H E +KC + + S+
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 40.9 bits (95), Expect = 3e-05
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
Y C C + L KH++ H ++ C C+ F TK +LT+HMK KK
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 40.9 bits (95), Expect = 4e-05
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
Y C+ C L +H++ H +R Y C C+ F K LT+HMK K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 40.1 bits (93), Expect = 5e-05
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
C C S LK+H++ H + Y C C+ F K NLTKHMK K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 39.7 bits (92), Expect = 7e-05
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK 485
C C S LK+H++ H + Y C C+ F K NLTKHMK KK
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 38.9 bits (90), Expect = 2e-04
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 133 RYKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK 187
+Y C+ C L +H++ H ++ C C+ F +K LT+HMK K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 38.2 bits (88), Expect = 3e-04
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
Y C+ C + L KH++ H ++ C C+ F +K LT+HMK K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 37.4 bits (86), Expect = 6e-04
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
C+ C L +H++ H +R Y C C F KG LT+HMK
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 37.0 bits (85), Expect = 8e-04
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 187 KYKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 241
KY C C S L +H++ H Y C C + K LT+H+K K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 34.3 bits (78), Expect = 0.006
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
C+ C L +H++ H ++ C C+ F K ++T+HMK K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 32.8 bits (74), Expect = 0.028
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
Y C+ C L +H++ H ++ C C+ F K LT+HMK K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 32.8 bits (74), Expect = 0.028
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
Y C+ C L +H++ H ++ C C+ F K LT+HMK K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 31.2 bits (70), Expect = 0.099
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 351 KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 403
C+ C + +H++ H Y C C + K LT+H+K K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 40.8 bits (95), Expect = 6e-05
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 257 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHM 315
+ K+HLG ++ KC+ C F +S L T C+ C K+ ++ L K
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNKDE 59
Query: 316 KVHQGMK 322
G K
Sbjct: 60 GNESGKK 66
Score = 39.3 bits (91), Expect = 2e-04
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Query: 419 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHM 477
+ K+HLG ++ KC+ C F +S L T C C K+ ++ L K
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNKDE 59
Query: 478 KLHQGIK 484
G K
Sbjct: 60 GNESGKK 66
Score = 36.9 bits (85), Expect = 0.001
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 526 SVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEH 584
S + K+HLG ++ KC C F + TL+ C+ C K+ ++ L +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKD 58
Query: 585 MKLHLG 590
G
Sbjct: 59 EGNESG 64
Score = 36.6 bits (84), Expect = 0.002
Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
Query: 444 SHLKEHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTE 502
+ ++H G + KC+ C F R+ L++ C+ C K+ + +L +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNK 57
Query: 503 HMKLHQGIK 511
G K
Sbjct: 58 DEGNESGKK 66
Score = 36.2 bits (83), Expect = 0.003
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Query: 149 LTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHM 207
+ K+H G ++ KC C F +S L+ C C K+ ++ L +
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKDE 59
Query: 208 KLH 210
Sbjct: 60 GNE 62
Score = 35.8 bits (82), Expect = 0.003
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 282 SHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTE 340
+ ++H G + KC C F R+ L++ C C K+ ++ L +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNK 57
Query: 341 HMKLHQGIK 349
G K
Sbjct: 58 DEGNESGKK 66
Score = 32.7 bits (74), Expect = 0.037
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 472 NLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEH 530
+ K K+H G + +KC C F + +L+ C+ C K+ + ++ +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKD 58
Query: 531 MKLHLGIK 538
G K
Sbjct: 59 EGNESGKK 66
Score = 32.3 bits (73), Expect = 0.048
Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEH 179
+ + K+H G R KC C F + L+ C C K+ ++ L +
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKD 58
Query: 180 MKRHQGIK 187
G K
Sbjct: 59 EGNESGKK 66
Score = 31.6 bits (71), Expect = 0.10
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 6/54 (11%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMK 160
KC C + + TL+ C+ C K+ + L + G K
Sbjct: 19 QKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKDEGNESGKK 66
Score = 31.6 bits (71), Expect = 0.11
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 199 SKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRL 257
S + K+H + + KC C + + L+ C C K+ ++ L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55
Query: 258 TEHMKLHLGIK 268
+ G K
Sbjct: 56 NKDEGNESGKK 66
Score = 31.2 bits (70), Expect = 0.14
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 7/71 (9%)
Query: 334 SKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYL 392
S + K+H G ++ KC C F L + T C+ C K+ + L
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIF------IRRSTLSRRKTPMCEKCRKDSCQEAAL 55
Query: 393 TEHLKLHQGIK 403
+ G K
Sbjct: 56 NKDEGNESGKK 66
Score = 29.2 bits (65), Expect = 0.55
Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 7/67 (10%)
Query: 365 VTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHM 423
+ K+H + + KC C + + L+ C C K+ ++ L +
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKDE 59
Query: 424 KLHLGIK 430
G K
Sbjct: 60 GNESGKK 66
Score = 26.2 bits (57), Expect = 7.1
Identities = 8/46 (17%), Positives = 15/46 (32%)
Query: 86 YKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQG 131
KC + + L + C+ C K+ + L + G
Sbjct: 19 QKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESG 64
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 44.8 bits (105), Expect = 9e-05
Identities = 11/51 (21%), Positives = 15/51 (29%), Gaps = 1/51 (1%)
Query: 161 NKCVLCSKEFSSKSYLTEHMKRH-QGIKYKCNLCSKEFSSKSYLTEHMKLH 210
S S G Y+C++CS S L H+ H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.8 bits (92), Expect = 0.003
Identities = 10/50 (20%), Positives = 14/50 (28%), Gaps = 1/50 (2%)
Query: 135 KCDLCSKEFSCKRYLTEHMKVH-QGMKNKCVLCSKEFSSKSYLTEHMKRH 183
+ S S G +C +CS S L H+ H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.5 bits (91), Expect = 0.004
Identities = 10/52 (19%), Positives = 15/52 (28%), Gaps = 1/52 (1%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVH-QGMKNKCVLCSKEFSSKSYLTEHMKLH 345
T + S + G +C +CS S L H+ H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 39.1 bits (90), Expect = 0.005
Identities = 10/51 (19%), Positives = 15/51 (29%), Gaps = 1/51 (1%)
Query: 269 NKCNLCSKEFSCKSHLKEHMQVH-QGITYKCDLCSKEFYRKQNLTKHMKVH 318
S S G Y+C +CS + +L H+ H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 38.7 bits (89), Expect = 0.007
Identities = 9/51 (17%), Positives = 14/51 (27%), Gaps = 1/51 (1%)
Query: 539 NKCDLCSKEFSTKHTLTEHMKLH-QGIRYKCDLCTKEFSRKGRLTEHMKLH 588
+ S S G Y+C +C+ L H+ H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.9 bits (87), Expect = 0.010
Identities = 10/50 (20%), Positives = 14/50 (28%), Gaps = 1/50 (2%)
Query: 108 KCDLCSKEYSYKHTLTEHMKLH-QGIRYKCDLCSKEFSCKRYLTEHMKVH 156
+ S S G Y+C +CS L H+ H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.9 bits (87), Expect = 0.010
Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 431 NKCNLCSKEFSCKSHLKEHMQVH-QGITYKCNLCSKEFYRKQNLTKHMKLH 480
S S G Y+C++CS + +L H+ H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.5 bits (86), Expect = 0.013
Identities = 8/51 (15%), Positives = 13/51 (25%), Gaps = 1/51 (1%)
Query: 404 NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVH 453
S S+ +C++CS L H+ H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.1 bits (85), Expect = 0.020
Identities = 8/51 (15%), Positives = 14/51 (27%), Gaps = 1/51 (1%)
Query: 350 NKCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLH 399
+ S S Y+C +C + + L H+ H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.4 bits (83), Expect = 0.032
Identities = 8/52 (15%), Positives = 13/52 (25%), Gaps = 1/52 (1%)
Query: 457 TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLH 507
T S + +C +CS + L H+ H
Sbjct: 152 TRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 36.0 bits (82), Expect = 0.037
Identities = 8/46 (17%), Positives = 13/46 (28%), Gaps = 1/46 (2%)
Query: 193 CSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLH 237
S S Y+C +C + + L H+ H
Sbjct: 158 TSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.19
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 106 GYKCDLCSKEYSYKHTLTEHMKLH 129
GY+C +CS L H+ H
Sbjct: 180 GYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.3 bits (75), Expect = 0.26
Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 7/96 (7%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLC 544
+ S S + +C +CS + H+ H G+ L
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH-GLHGNMTLT 212
Query: 545 SKEFSTKHTLTEHMKLHQGIRY---KCDLCTKEFSR 577
S E +TE + Q D+ K+ ++
Sbjct: 213 SSEIQR--HITEFISSWQNHPIVQVSADVENKKTAQ 246
Score = 32.9 bits (74), Expect = 0.40
Identities = 7/30 (23%), Positives = 10/30 (33%)
Query: 235 KLHQGIKNKCVLCSKEFSRKRRLTEHMKLH 264
G +C +CS L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 32.9 bits (74), Expect = 0.40
Identities = 7/30 (23%), Positives = 10/30 (33%)
Query: 397 KLHQGIKNKCVLCSKEFSRKRRLTEHMKLH 426
G +C +CS L H+ H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 38.6 bits (91), Expect = 2e-04
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 178 EHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCD 218
G K Y CN+C K F ++L +H+++H QE
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 36.3 bits (85), Expect = 0.001
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 421 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K CN+C K F +HL +H++VH T +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 36.3 bits (85), Expect = 0.001
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 259 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCD 299
G K CN+C K F +HL +H++VH T
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 35.2 bits (82), Expect = 0.002
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 124 EHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C++C K F +L +H++VH
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 34.4 bits (80), Expect = 0.005
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 151 EHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C +C K F ++L +H++ H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 32.9 bits (76), Expect = 0.014
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C +C K F ++L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 32.5 bits (75), Expect = 0.021
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 556 EHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C++C K F L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ 37
Score = 32.5 bits (75), Expect = 0.022
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 448 EHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y CN+C K F +L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 32.5 bits (75), Expect = 0.022
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 286 EHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y C++C K F +L +H++VH
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 30.9 bits (71), Expect = 0.090
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C++C K F L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 29.8 bits (68), Expect = 0.19
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 529 EHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
G K C++C K F L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 29.8 bits (68), Expect = 0.22
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 340 EHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH-QEITYKCD 380
G K C++C K F ++ +H+++H QE
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 28.6 bits (65), Expect = 0.53
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 502 EHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C++C K F + +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 28.6 bits (65), Expect = 0.57
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCD 137
Y C++C K + L +H+++H
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 232 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K C +C K F L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 27.5 bits (62), Expect = 1.2
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 394 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K C +C K F L +H+++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 26.3 bits (59), Expect = 4.1
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 205 EHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 241
E Y C++C K + +L +HL++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
Score = 26.3 bits (59), Expect = 4.1
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 367 EHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 403
E Y C++C K + +L +HL++H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 37.6 bits (88), Expect = 3e-04
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 178 EHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
K Y CN C K F+ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 34.5 bits (80), Expect = 0.004
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 556 EHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
+ Y C+ C K F+R LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 34.1 bits (79), Expect = 0.005
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 259 EHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
K CN C K F+ HL H ++H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 34.1 bits (79), Expect = 0.005
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 421 EHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 455
K CN C K F+ HL H ++H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 33.7 bits (78), Expect = 0.008
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQG 347
K C C K F+ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 33.3 bits (77), Expect = 0.011
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 124 EHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQG 158
+ Y C+ C K F+ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 33.3 bits (77), Expect = 0.011
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 448 EHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQG 482
Y CN C K F R +LT+H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 32.9 bits (76), Expect = 0.015
Identities = 10/36 (27%), Positives = 12/36 (33%), Gaps = 1/36 (2%)
Query: 151 EHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQG 185
K C C K F+ +LT H K H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 31.8 bits (73), Expect = 0.041
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 286 EHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQG 320
Y C+ C K F R +LT+H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 29.9 bits (68), Expect = 0.19
Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 232 EHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLG 266
K C C K F+R LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 29.9 bits (68), Expect = 0.19
Identities = 11/36 (30%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 394 EHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLG 428
K C C K F+R LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 29.1 bits (66), Expect = 0.35
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQG 563
K C+ C K F+ LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 28.3 bits (64), Expect = 0.58
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQG 509
K C+ C K F+ LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 27.2 bits (61), Expect = 1.6
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 340 EHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH 372
K C+ C K F+ ++T H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 27.2 bits (61), Expect = 1.7
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 205 EHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQG 239
+Y C+ C K ++ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 27.2 bits (61), Expect = 1.7
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 367 EHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQG 401
+Y C+ C K ++ +LT H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 26.4 bits (59), Expect = 3.3
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 502 EHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLG 536
K C+ C K F+ +T H K+H
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 26.0 bits (58), Expect = 5.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y C+ C K ++ LT H K+H
Sbjct: 13 YNCNECGKAFTRIFHLTRHQKIHTR 37
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 38.8 bits (90), Expect = 4e-04
Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 11/68 (16%)
Query: 134 YKCDLCSKEFSCKRYLTEHM-KVHQGMKNK---------CVLCSKEFSSKSYLTEHMKRH 183
C + FS L H+ H G + C K F +K L H++ H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 184 QGIK-YKC 190
G K
Sbjct: 86 TGEKSGPS 93
Score = 38.4 bits (89), Expect = 6e-04
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 10/61 (16%)
Query: 243 KCVLCSKEFSRKRRLTEHM-KLHLGIKNK---------CNLCSKEFSCKSHLKEHMQVHQ 292
C + FS L H+ H+G + C K F K L H++VH
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 293 G 293
G
Sbjct: 87 G 87
Score = 38.4 bits (89), Expect = 6e-04
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 10/61 (16%)
Query: 405 KCVLCSKEFSRKRRLTEHM-KLHLGIKNK---------CNLCSKEFSCKSHLKEHMQVHQ 454
C + FS L H+ H+G + C K F K L H++VH
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 455 G 455
G
Sbjct: 87 G 87
Score = 37.6 bits (87), Expect = 0.001
Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 10/65 (15%)
Query: 295 TYKCDLCSKEFYRKQNLTKHM-KVHQGMKNK---------CVLCSKEFSSKSYLTEHMKL 344
+ C + F L H+ H G + C K F +K L H+++
Sbjct: 25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84
Query: 345 HQGIK 349
H G K
Sbjct: 85 HTGEK 89
Score = 36.9 bits (85), Expect = 0.002
Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 10/63 (15%)
Query: 270 KCNLCSKEFSCKSHLKEHMQ-VHQGITYK---------CDLCSKEFYRKQNLTKHMKVHQ 319
C + FS L H+ H G + C K F K L H++VH
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 320 GMK 322
G K
Sbjct: 87 GEK 89
Score = 35.7 bits (82), Expect = 0.005
Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 10/65 (15%)
Query: 457 TYKCNLCSKEFYRKQNLTKHM-KLHQGIKKK---------CDLCSKEFSTKCSLTEHMKL 506
+ C + F L H+ H G ++ C K F K L H+++
Sbjct: 25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84
Query: 507 HQGIK 511
H G K
Sbjct: 85 HTGEK 89
Score = 35.3 bits (81), Expect = 0.007
Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 16/83 (19%)
Query: 518 SKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHM-KLHQGIRYK--------- 567
+E SCK + C + FST H L H+ H G +
Sbjct: 11 KQELSCKWIDEAQLS------RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE 64
Query: 568 CDLCTKEFSRKGRLTEHMKLHLG 590
C K F K +L H+++H G
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTG 87
Score = 35.3 bits (81), Expect = 0.008
Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 10/63 (15%)
Query: 432 KCNLCSKEFSCKSHLKEHMQ-VHQGITYK---------CNLCSKEFYRKQNLTKHMKLHQ 481
C + FS L H+ H G + C K F K L H+++H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 482 GIK 484
G K
Sbjct: 87 GEK 89
Score = 34.2 bits (78), Expect = 0.020
Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 10/69 (14%)
Query: 102 CQDIGYKCDLCSKEYSYKHTLTEHM-KLHQGIRYK---------CDLCSKEFSCKRYLTE 151
+ C + +S H L H+ H G + C K F K L
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80
Query: 152 HMKVHQGMK 160
H++VH G K
Sbjct: 81 HIRVHTGEK 89
Score = 33.0 bits (75), Expect = 0.042
Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 10/79 (12%)
Query: 470 KQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHM-KLHQGIKKK---------CDLCSK 519
KQ L+ + + C + FST L H+ H G ++ C K
Sbjct: 11 KQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGK 70
Query: 520 EFSCKRSVTEHMKLHLGIK 538
F K + H+++H G K
Sbjct: 71 SFKAKYKLVNHIRVHTGEK 89
Score = 31.5 bits (71), Expect = 0.15
Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 10/75 (13%)
Query: 308 KQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHM-KLHQGIKNK---------CDLCSK 357
KQ L+ + C + FS+ L H+ H G + C K
Sbjct: 11 KQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGK 70
Query: 358 EFSCKRYVTEHMKLH 372
F K + H+++H
Sbjct: 71 SFKAKYKLVNHIRVH 85
Score = 31.5 bits (71), Expect = 0.17
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 374 EITYKCDLCLKEYSNKIYLTEHL-KLHQGIKNK---------CVLCSKEFSRKRRLTEHM 423
+++ C + +S L H+ H G + C K F K +L H+
Sbjct: 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82
Query: 424 KLHLGIK 430
++H G K
Sbjct: 83 RVHTGEK 89
Score = 30.3 bits (68), Expect = 0.36
Identities = 16/83 (19%), Positives = 26/83 (31%), Gaps = 21/83 (25%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLH--QEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCV 245
C + FS+ L H+ + +C E +C
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE-------------------ECP 66
Query: 246 LCSKEFSRKRRLTEHMKLHLGIK 268
K F K +L H+++H G K
Sbjct: 67 REGKSFKAKYKLVNHIRVHTGEK 89
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 38.1 bits (89), Expect = 4e-04
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCDL--CSKEFYRKQNLTKHMKVH 318
C K + SHLK H + H G + C C + F R L++H + H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 37.8 bits (88), Expect = 6e-04
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLH 480
C K + SHLK H + H G + C+ C + F R L++H + H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 35.4 bits (82), Expect = 0.004
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLH 210
C K + S+L H + H G K + C+ C + F+ L+ H + H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 35.1 bits (81), Expect = 0.005
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 544 CSKEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSRKGRLTEHMKLH 588
C K + L H + H G + + C C + F+R L+ H + H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 33.9 bits (78), Expect = 0.013
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 281 KSHLKEHMQVHQGI-TYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVL--CSKEFSS 334
S I ++ C C K +++ +L H + H G K C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 335 KSYLTEHMKLH 345
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 33.1 bits (76), Expect = 0.027
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 443 KSHLKEHMQVHQGI-TYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDL--CSKEFST 496
S I ++ C+ C K +++ +L H + H G K C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 497 KCSLTEHMKLH 507
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 30.8 bits (70), Expect = 0.19
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNL--CSKEFSCKSHLKEHMQVH 291
C K + + L H + H G K C+ C + F+ L H + H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 30.8 bits (70), Expect = 0.19
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNL--CSKEFSCKSHLKEHMQVH 453
C K + + L H + H G K C+ C + F+ L H + H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 30.4 bits (69), Expect = 0.26
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVH 156
+ C C K Y L H + H G + + C C + F+ L+ H + H
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 30.0 bits (68), Expect = 0.30
Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 6/71 (8%)
Query: 119 KHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMKN-KCVL--CSKEFSS 172
+ IR + C C K + +L H + H G K C C + F+
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 173 KSYLTEHMKRH 183
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 28.5 bits (64), Expect = 1.3
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 215 YKCDL--CLKEYSNKIYLTEHLKLHQGIKN-KCVL--CSKEFSRKRRLTEHMKLH 264
+ C C K Y +L H + H G K C C + F+R L+ H + H
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 28.5 bits (64), Expect = 1.3
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 377 YKCDL--CLKEYSNKIYLTEHLKLHQGIKN-KCVL--CSKEFSRKRRLTEHMKLH 426
+ C C K Y +L H + H G K C C + F+R L+ H + H
Sbjct: 18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 37.1 bits (87), Expect = 4e-04
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y C+ C K FSSKSYL HM+ H E
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.010
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
G K C C K FSSKSYL HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.016
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C C K FS K YL HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 32.9 bits (76), Expect = 0.016
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K C+ C K FS KS+L HM+ H G
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.016
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 460
G K C+ C K FS KS+L HM+ H G
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 31.8 bits (73), Expect = 0.042
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C K FSSKSYL HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y C+ C K F K L HM+ H G K
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 29.4 bits (67), Expect = 0.27
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C C K FS K L HM+ H G
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG 37
Score = 29.4 bits (67), Expect = 0.29
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C C K F K L HM+ H G K
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 28.7 bits (65), Expect = 0.53
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C C K FS+K L HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 27.5 bits (62), Expect = 1.1
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K C C K FS+K L HM+ H G +
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.5
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K C C K FS K Y+ HM+ H E
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 26.4 bits (59), Expect = 3.6
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C C K FS K + HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 26.0 bits (58), Expect = 4.9
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K C C K FS K L HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 26.0 bits (58), Expect = 4.9
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K C C K FS K L HM+ H G K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39
Score = 25.6 bits (57), Expect = 5.6
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C C K +S K L HM+ H G +
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 37.1 bits (87), Expect = 5e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K +KCN C K F+ S LT H ++H E
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K KCN C K F+ S L H ++H G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ S LT H + H G K +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.008
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K KCN C K F+ S L H ++H G
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.020
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + +KC+ C K F+ LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.048
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G +KCN C K F + +LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.057
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ S LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.084
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + +KC+ C K F++ LT H ++H G
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG 37
Score = 30.6 bits (70), Expect = 0.10
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G +KC+ C K F + +LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 29.8 bits (68), Expect = 0.20
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F+ SLT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 29.0 bits (66), Expect = 0.38
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F+ +LT H ++H G +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 0.88
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+KC+ C K ++ +LT H ++H G +
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.2
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K F+ S+T H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 27.1 bits (61), Expect = 1.8
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F++ LT H ++H G K + +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F++ LT H ++H G K + +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.2
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC+ C K F+ +T H ++H E
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 8.0
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 206 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 241
+ +KC+ C K ++ LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
Score = 25.2 bits (56), Expect = 8.0
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 368 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 403
+ +KC+ C K ++ LT H ++H G K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 36.7 bits (86), Expect = 7e-04
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KC C F +HL+ H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 36.7 bits (86), Expect = 7e-04
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
G K KC C F +HL+ H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 36.3 bits (85), Expect = 7e-04
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G K YKC C F ++L H+ +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 34.4 bits (80), Expect = 0.004
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC+ C F + +L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 34.4 bits (80), Expect = 0.005
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C F +L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 33.7 bits (78), Expect = 0.009
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C F + L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 33.3 bits (77), Expect = 0.011
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC C F + +L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 32.9 bits (76), Expect = 0.013
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C F ++L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 31.7 bits (73), Expect = 0.033
Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK 187
G K KC C F ++L H+ H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 31.7 bits (73), Expect = 0.040
Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C F L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 29.8 bits (68), Expect = 0.19
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQG 563
G K KC+ C F L H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36
Score = 29.4 bits (67), Expect = 0.29
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
YKC+ C + L H+ +H G
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTG 36
Score = 27.9 bits (63), Expect = 0.80
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
KC C F + L H+ +H G
Sbjct: 13 KCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 27.9 bits (63), Expect = 0.80
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
KC C F + L H+ +H G
Sbjct: 13 KCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 27.5 bits (62), Expect = 1.0
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C F + H+ +H G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 26.3 bits (59), Expect = 3.5
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH 372
G K KC+ C F ++ H+ +H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 36.7 bits (86), Expect = 7e-04
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K FS S L++H K+H E
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K FS S L +H ++H G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.003
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K FS S L++H K H G K +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.009
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KCN C K FS S L +H ++H G
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.013
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K FS L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 32.1 bits (74), Expect = 0.026
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K FS S L++H K+H G K
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 31.7 bits (73), Expect = 0.039
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKCN C K F R L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 31.7 bits (73), Expect = 0.040
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K FSR +L++H K+H G
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG 37
Score = 31.0 bits (71), Expect = 0.081
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC+ C K F R L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 29.8 bits (68), Expect = 0.22
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K+ KC+ C K FS L++H K+H G K
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 28.6 bits (65), Expect = 0.51
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K FS L++H K+H G +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.66
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K FSR +L++H K+H G K + +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 0.66
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K FSR +L++H K+H G K + +
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K +S L++H K+H G +
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.4
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K+ KC+ C K FS +++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 26.7 bits (60), Expect = 2.2
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC+ C K FS +++H K+H E
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 7.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 206 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 241
E YKC+ C K +S L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
Score = 25.6 bits (57), Expect = 7.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 368 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 403
E YKC+ C K +S L++H K+H G K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 36.7 bits (86), Expect = 7e-04
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKC 217
G + Y CN C K F S+L EH+K H +E +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G + C C K F S+L EH+KRH K +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 33.3 bits (77), Expect = 0.013
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G + CN C K F SHL EH++ H + +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 33.3 bits (77), Expect = 0.013
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G R Y C+ C K F R L EH+K H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR 37
Score = 32.9 bits (76), Expect = 0.014
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G + CN C K F SHL EH++ H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.5 bits (75), Expect = 0.023
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y CN C K F R +L +H+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 32.1 bits (74), Expect = 0.026
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G R Y C+ C K F +L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 31.7 bits (73), Expect = 0.036
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 287 HMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y C+ C K F R +L +H+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 31.7 bits (73), Expect = 0.041
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G + C C K F S+L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 29.0 bits (66), Expect = 0.39
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C+ C K + L EH+K H +
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 28.3 bits (64), Expect = 0.74
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G + C+ C K F L EH+K H +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 27.9 bits (63), Expect = 1.1
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G + C C K F R L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 27.9 bits (63), Expect = 1.1
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G + C C K F R L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 27.5 bits (62), Expect = 1.3
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G + C+ C K F L EH+K H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 26.3 bits (59), Expect = 3.3
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH-QEITYKC 379
G + C+ C K F ++ EH+K H +E +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 25.2 bits (56), Expect = 7.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
Y C+ C K + +L EHLK H K
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREK 39
Score = 25.2 bits (56), Expect = 7.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
Y C+ C K + +L EHLK H K
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREK 39
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.4 bits (85), Expect = 8e-04
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y CN C K FS KS L+ H + H E
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K CN C K FS KS L H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.006
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C C K FS KS L+ H + H G K +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.018
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K CN C K FS KS L H + H G
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.038
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y CN C K F +K L+ H + H G K
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 31.3 bits (72), Expect = 0.060
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C+ C K FS K L+ H + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 30.6 bits (70), Expect = 0.12
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C K FS KS L+ H + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C+ C K F +K L+ H + H G K
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 29.8 bits (68), Expect = 0.17
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C+ C K FS+K L+ H + H G
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG 37
Score = 28.7 bits (65), Expect = 0.49
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C+ C K FS K L+ H + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 27.5 bits (62), Expect = 1.2
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K C+ C K FS K L+ H + H G +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.5
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C+ C K +S K L+ H + H G +
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 5.6
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K C C K FS+K L+ H + H G K + +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 5.6
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K C C K FS+K L+ H + H G K + +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 5.9
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C+ C K FS K ++ H + H G K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEK 39
Score = 25.2 bits (56), Expect = 7.7
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K C+ C K FS K ++ H + H E
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.4 bits (85), Expect = 0.001
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+CN C K FS +S LT H +H +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K +CN C K FS +S L H +H G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 33.7 bits (78), Expect = 0.007
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C C K FS +S LT H H G K +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 32.9 bits (76), Expect = 0.018
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K +CN C K FS +S L H +H G
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 31.7 bits (73), Expect = 0.038
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C+ C K FS + LT H +H G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 31.0 bits (71), Expect = 0.070
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K FS +S LT H +H G K
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+CN C K F + +LT H +H G K
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 29.8 bits (68), Expect = 0.19
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C+ C K FS + LT H +H G
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG 37
Score = 29.4 bits (67), Expect = 0.24
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C+ C K F + +LT H +H G K
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 29.4 bits (67), Expect = 0.25
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C+ C K FS + SLT H +H G K
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 27.9 bits (63), Expect = 1.1
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C+ C K FS + +LT H +H G +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 27.1 bits (61), Expect = 1.9
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C+ C K +S + +LT H +H G +
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 27.1 bits (61), Expect = 1.9
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C+ C K FS + S+T H +H G K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKK 39
Score = 26.0 bits (58), Expect = 4.2
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K +C C K FS + LT H +H G K + +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 26.0 bits (58), Expect = 4.2
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K +C C K FS + LT H +H G K + +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 25.6 bits (57), Expect = 5.8
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K +C+ C K FS + +T H +H +
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 35.9 bits (84), Expect = 0.001
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G+K Y CN C K F SKSYL H + H E
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 33.2 bits (77), Expect = 0.010
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
GMK C C K F SKSYL H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 32.5 bits (75), Expect = 0.021
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
GMK C C K F SKSYL H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 32.5 bits (75), Expect = 0.021
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G+K CN C K F KS+L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 32.5 bits (75), Expect = 0.021
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
G+K CN C K F KS+L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 30.9 bits (71), Expect = 0.069
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G++ Y C+ C K F K YL H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 30.1 bits (69), Expect = 0.13
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y CN C K F K L H + H G
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 29.0 bits (66), Expect = 0.34
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C+ C K F K L H + H G
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 27.8 bits (63), Expect = 0.89
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G++ Y C+ C K F K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG 37
Score = 27.1 bits (61), Expect = 1.7
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G+K C+ C K F +K L H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39
Score = 25.9 bits (58), Expect = 4.1
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G+K C+ C K F +K L H + H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 35.9 bits (84), Expect = 0.001
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G K Y C +C F L H+++H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 35.6 bits (83), Expect = 0.001
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C++C F Q L H+++H G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 35.6 bits (83), Expect = 0.002
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
C +C F LK H+++H G
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTG 36
Score = 35.6 bits (83), Expect = 0.002
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG 455
C +C F LK H+++H G
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTG 36
Score = 34.8 bits (81), Expect = 0.003
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y C +C F Q L H+++H G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 33.6 bits (78), Expect = 0.007
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C++C F + L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 33.2 bits (77), Expect = 0.012
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C++C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 32.1 bits (74), Expect = 0.027
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C++C F +L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 31.7 bits (73), Expect = 0.035
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y C++C + + TL H+++H G
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTG 36
Score = 31.3 bits (72), Expect = 0.046
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C +C F L H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 30.9 bits (71), Expect = 0.067
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQG 563
C++C F TL H+++H G
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTG 36
Score = 30.2 bits (69), Expect = 0.12
Identities = 9/37 (24%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK 187
G K C +C F L H++ H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 28.2 bits (64), Expect = 0.62
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C++C F +++ H+++H G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 28.2 bits (64), Expect = 0.69
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
C +C F + L H+++H G
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 28.2 bits (64), Expect = 0.69
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
C +C F + L H+++H G
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 26.3 bits (59), Expect = 3.4
Identities = 7/33 (21%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH 372
G K C++C F + + H+++H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.9 bits (84), Expect = 0.001
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCD 218
G K +KC++C K F +S L H +H E
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC +C K F +S L H H K +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.006
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC++C K F +S L H VH +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.012
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCD 299
G K KC++C K F +S L H VH
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.013
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G +KCD+C K F + L +H VH K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 32.5 bits (75), Expect = 0.024
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G +KC++C K F + L +H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 32.5 bits (75), Expect = 0.025
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + +KCD+C K F + L H VH K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 31.3 bits (72), Expect = 0.049
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + +KCD+C K F + RL H +H
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA 37
Score = 31.3 bits (72), Expect = 0.057
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC +C K F +S L H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KCD+C K F + L H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 29.8 bits (68), Expect = 0.22
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
G K KCD+C K F + L H +H +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.35
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCD 137
+KCD+C K + + L H +H +
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.7
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC +C K F + RL H +H K + +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.7
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC +C K F + RL H +H K + +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.9
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KCD+C K F + + H +H K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39
Score = 25.9 bits (58), Expect = 4.6
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCD 380
G K KCD+C K F + + H +H E
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 36.0 bits (84), Expect = 0.001
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K FS S L H ++H E
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.004
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K FS S L H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.008
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K FS S L H + H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.019
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KCN C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37
Score = 31.3 bits (72), Expect = 0.053
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K FS L H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.059
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K FS S L H ++H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.084
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F + L +H ++H G K
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K FS+ +L H ++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG 37
Score = 29.8 bits (68), Expect = 0.20
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F + L +H ++H G K
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 29.4 bits (67), Expect = 0.30
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K FS L H ++H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 27.5 bits (62), Expect = 1.2
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K FS L H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.0
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K +S L H ++H G +
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.2
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K FS+ +L H ++H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.2
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K FS+ +L H ++H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 4.0
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K FS + H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39
Score = 25.2 bits (56), Expect = 8.8
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC+ C K FS + H ++H E
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 35.6 bits (83), Expect = 0.002
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 183 HQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K + C+ C K FSSKSYL H + H E
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 34.0 bits (79), Expect = 0.005
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
C C K FSSKSYL H + H K +
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 32.9 bits (76), Expect = 0.017
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
C+ C K FS KS+L H Q H +
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 32.1 bits (74), Expect = 0.026
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
+ C C K FS K YL H + H K
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 31.4 bits (72), Expect = 0.048
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
C+ C K FS KS+L H Q H
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAE 35
Score = 30.6 bits (70), Expect = 0.11
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK 349
C C K FSSKSYL H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 30.2 bits (69), Expect = 0.12
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+ C+ C K F K L H + H K
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 30.2 bits (69), Expect = 0.12
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+ C C K F K L H + H K
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 30.2 bits (69), Expect = 0.12
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
+ C C K FS K L H + H
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAE 35
Score = 27.9 bits (63), Expect = 1.00
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIK 511
C C K FS+K L H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 27.5 bits (62), Expect = 1.1
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
C C K FS+K L H + H +
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 27.5 bits (62), Expect = 1.3
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+ C C K +S K L H + H +
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 26.3 bits (59), Expect = 3.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
+ C C K +S+K YL H + H K
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 26.3 bits (59), Expect = 3.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
+ C C K +S+K YL H + H K
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 26.3 bits (59), Expect = 3.5
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
C C K FS K L H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 26.3 bits (59), Expect = 3.5
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
C C K FS K L H + H K
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEK 37
Score = 25.2 bits (56), Expect = 9.6
Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 351 KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
C C K FS K Y+ H + H E
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.6 bits (83), Expect = 0.002
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
+G K KC++C KEFS SHL+ H +VH G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.003
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC++C KEFS S+L H ++H E
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.005
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC +C KEFS S+L H + H G K +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.009
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
+G K KC++C KEFS SHL+ H +VH G
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37
Score = 32.5 bits (75), Expect = 0.022
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKCD+C KEFS +L H +VH G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.065
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKCD+C KEF + +L H +VH G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.079
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKCD+C KEFS+ L H ++H G
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG 37
Score = 30.6 bits (70), Expect = 0.10
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC +C KEFS S+L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC++C KEF + +L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 28.6 bits (65), Expect = 0.57
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KCD+C KEFS L H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 27.9 bits (63), Expect = 0.91
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
+G K KCD+C KEFS L H ++H G +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.2
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKCD+C KE+S L H ++H G +
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC +C KEFS+ L H ++H G K + +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.6
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC +C KEFS+ L H ++H G K + +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 5.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KCD+C KEFS + H ++H G K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 25.6 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
YKCD+C KE+S +L H ++H G K
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 25.6 bits (57), Expect = 5.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
YKCD+C KE+S +L H ++H G K
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEK 39
Score = 25.6 bits (57), Expect = 6.3
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KCD+C KEFS ++ H ++H E
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC+ C K F+ KS L H K H E
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ KS L H K H G + +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 34.0 bits (79), Expect = 0.006
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K KC+ C K F+ KS L+ H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 32.5 bits (75), Expect = 0.020
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K KC+ C K F+ KS L+ H + H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 31.7 bits (73), Expect = 0.036
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC C K F+ K L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 30.6 bits (70), Expect = 0.092
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ KS L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC C K F+ K RL H K H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG 37
Score = 30.2 bits (69), Expect = 0.15
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC+ C K F K L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC C K F K L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 29.0 bits (66), Expect = 0.38
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K F+ K L H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 28.7 bits (65), Expect = 0.48
Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC C K F+ K L H K H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 27.9 bits (63), Expect = 1.1
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC C K +++K L H K H G R
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 26.7 bits (60), Expect = 2.4
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC C K F+ K + H K H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGER 39
Score = 26.7 bits (60), Expect = 2.7
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F+ K RL H K H G + + +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 26.7 bits (60), Expect = 2.7
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F+ K RL H K H G + + +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 26.0 bits (58), Expect = 4.2
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC C K F+ K + H K H E
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 35.1 bits (82), Expect = 0.002
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+CN C K F++KS L H + H E
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 32.8 bits (76), Expect = 0.015
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K +CN C K F+ KS+L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37
Score = 32.8 bits (76), Expect = 0.015
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
G K +CN C K F+ KS+L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37
Score = 31.7 bits (73), Expect = 0.042
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+CN C K F K NL H + H G
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 31.3 bits (72), Expect = 0.055
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
G K +C C K F++KS L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 31.3 bits (72), Expect = 0.063
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C+ C K F+ K L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 30.5 bits (70), Expect = 0.10
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C+ C K F K NL H + H G
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 29.4 bits (67), Expect = 0.25
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F++KS L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 29.4 bits (67), Expect = 0.31
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C+ C K F+ K L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG 37
Score = 28.2 bits (64), Expect = 0.69
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C+ C K F+TK +L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 27.4 bits (62), Expect = 1.2
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C+ C K F+TK L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 25.9 bits (58), Expect = 4.1
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C+ C K F+ K ++ H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 25.9 bits (58), Expect = 4.7
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C+ C K ++ K L H + H G
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 25.1 bits (56), Expect = 8.1
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C C K F+ K L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
Score = 25.1 bits (56), Expect = 8.1
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C C K F+ K L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGES 39
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+C++C K FS + L+ H ++H +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K +C++C K FS + L H ++H G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 33.6 bits (78), Expect = 0.010
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C +C K FS + L+ H + H G K +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 32.1 bits (74), Expect = 0.035
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K +C++C K FS + L H ++H G
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 31.7 bits (73), Expect = 0.039
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C +C K FS ++ L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C +C K FS + L+ H ++H G K
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 30.6 bits (70), Expect = 0.12
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y+C++C K F +Q+L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y+C +C K F +Q+L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 29.8 bits (68), Expect = 0.17
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C +C K FS + L+ H ++H G
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG 37
Score = 29.4 bits (67), Expect = 0.29
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C +C K FS + SL+ H ++H G K
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 27.9 bits (63), Expect = 0.96
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C +C K FS + +L+ H ++H G +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 27.1 bits (61), Expect = 1.9
Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C +C K +S++ +L+ H ++H G +
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 26.7 bits (60), Expect = 2.2
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C +C K FS ++S++ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 25.5 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C +C K FS ++ L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 25.5 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C +C K FS ++ L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKK 39
Score = 25.5 bits (57), Expect = 6.4
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K +C +C K FS ++ ++ H ++H +
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC C K F S T+H +LH +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 34.1 bits (79), Expect = 0.006
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC+ C K F S T+H + H G + +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 33.7 bits (78), Expect = 0.009
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC C K F S +H ++H G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 31.8 bits (73), Expect = 0.036
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KC C K F S +H ++H G
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 31.8 bits (73), Expect = 0.043
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC C K F T+H ++H G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 31.4 bits (72), Expect = 0.062
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC C K F + T+H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 31.0 bits (71), Expect = 0.077
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC+ C K F S T+H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC C K F + T+H ++H G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC C K F T+H +LH G
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG 37
Score = 28.7 bits (65), Expect = 0.52
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K F S T+H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 28.3 bits (64), Expect = 0.62
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC C K F + T+H +LH G R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 28.3 bits (64), Expect = 0.64
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC C K + + T+H +LH G R
Sbjct: 13 YKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 27.5 bits (62), Expect = 1.3
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC+ C K F T+H +LH G + + +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 27.5 bits (62), Expect = 1.3
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC+ C K F T+H +LH G + + +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 27.2 bits (61), Expect = 1.9
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC C K F S T+H +LH G +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQR 39
Score = 25.6 bits (57), Expect = 6.8
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC C K F T+H +LH +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 178 EHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G + Y+C+ C K F+ KS L H ++H E
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 151 EHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G ++ +C C K F+ KS L H + H G K +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.011
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 421 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G ++ +C+ C K F+ KS L H ++H G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.031
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 124 EHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G R Y+C C K F+ K L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.040
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 259 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G ++ +C+ C K F+ KS L H ++H G
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.046
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 556 EHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G R Y+C C K F+RK L H ++H G
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG 37
Score = 30.9 bits (71), Expect = 0.084
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 448 EHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y+C+ C K F RK L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.091
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G ++ +C C K F+ KS L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 286 EHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y+C C K F RK L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 28.2 bits (64), Expect = 0.67
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 529 EHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G ++ +C C K F+ K TL H ++H G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 0.80
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G + +C C K F+ K +L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 27.1 bits (61), Expect = 1.9
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 232 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G ++ +C C K F+RK L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 27.1 bits (61), Expect = 1.9
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 394 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G ++ +C C K F+RK L H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
Score = 25.9 bits (58), Expect = 4.3
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K ++ K TL H ++H G +
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 25.5 bits (57), Expect = 6.6
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 502 EHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G + +C C K F+ K ++ H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEK 39
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC++C K F S LT H ++H E
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC++C K F S L H ++H G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.007
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC +C K F S LT H + H G K +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.023
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KC++C K F S L H ++H G
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.029
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKCD+C K F LT H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.047
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKC++C K F +LT H ++H G K
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.057
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKCD+C K F +LT H ++H G K
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.14
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC +C K F S LT H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.17
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKCD+C K F LT H ++H G
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG 37
Score = 29.4 bits (67), Expect = 0.28
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KCD+C K F SLT H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 29.4 bits (67), Expect = 0.30
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKCD+C K + Y +LT H ++H G +
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.44
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KCD+C K F +LT H ++H G +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.6
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KCD+C K F S+T H ++H G K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEK 39
Score = 26.7 bits (60), Expect = 2.6
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC +C K F LT H ++H G K + +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.6
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC +C K F LT H ++H G K + +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 5.6
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KCD+C K F +T H ++H E
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G+K Y CN C K FS S LT H +H E
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G+K CN C K FS S L H +H G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.009
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G+K C C K FS S LT H H G K +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.025
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G+K CN C K FS S L H +H G
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37
Score = 32.1 bits (74), Expect = 0.028
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G++ Y C+ C K FS LT H +H G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y CN C K F +LT H +H G K
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 30.2 bits (69), Expect = 0.14
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G+K C C K FS S LT H +H G K
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 30.2 bits (69), Expect = 0.17
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G++ Y C+ C K FS LT H +H G
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG 37
Score = 29.8 bits (68), Expect = 0.18
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C+ C K F +LT H +H G K
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 29.4 bits (67), Expect = 0.28
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G+K C+ C K FS SLT H +H G K
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 28.6 bits (65), Expect = 0.45
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G+K C+ C K FS +LT H +H G +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.61
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C+ C K +S +LT H +H G +
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.3
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G+K C+ C K FS S+T H +H G K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEK 39
Score = 26.7 bits (60), Expect = 2.9
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G+K C C K FS LT H +H G K + +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.9
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G+K C C K FS LT H +H G K + +
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 6.2
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G+K C+ C K FS +T H +H E
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K ++C C K F+ KS L+ H K+H E
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K+ +C C K F+ KS L+ H K H G K +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.012
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K+ +C C K F+ KS L H ++H G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.046
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K+ +C C K F+ KS L H ++H G
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.060
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + ++C C K F+ K L+ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 31.0 bits (71), Expect = 0.074
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
++C C K F RK L+ H K+H G K
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 30.6 bits (70), Expect = 0.090
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + ++C C K F+RK L+ H K+H G
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG 37
Score = 30.6 bits (70), Expect = 0.10
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K+ +C C K F+ KS L+ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 30.6 bits (70), Expect = 0.12
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
++C C K F RK L+ H K+H G K
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 28.3 bits (64), Expect = 0.71
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K F+ K +L+ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
Score = 28.3 bits (64), Expect = 0.73
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K+ +C C K F+ K TL+ H K+H G +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.5
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K+ +C C K F+RK L+ H K+H G K + +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.5
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K+ +C C K F+RK L+ H K+H G K + +
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.9
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
++C C K ++ K TL+ H K+H G +
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C K F+ K +++ H K+H G K
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEK 39
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K +KC C K FS +S L H KLH E
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.016
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KCV C K FS +S L H K H G K +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.022
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G K KC C K FS +S L H ++H G
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37
Score = 32.5 bits (75), Expect = 0.022
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 455
G K KC C K FS +S L H ++H G
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37
Score = 32.1 bits (74), Expect = 0.031
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KCV C K FS +S L H KLH G K
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 31.7 bits (73), Expect = 0.044
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + +KC C K FS + L H K+H G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 31.0 bits (71), Expect = 0.072
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+KC C K F R+ L H KLH G K
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 31.0 bits (71), Expect = 0.074
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + +KC C K FSR+ L H KLH G
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG 37
Score = 30.6 bits (70), Expect = 0.11
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+KC C K F R+ L H K+H G K
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K FS + +L H KLH G K
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 28.6 bits (65), Expect = 0.57
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC C K FS + L H KLH G +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+KC C K +S + L H KLH G +
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.7
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K KCV C K FSR+ L H KLH G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 27.1 bits (61), Expect = 1.7
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K KCV C K FSR+ L H KLH G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 26.7 bits (60), Expect = 2.4
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC C K FS + ++ H KLH G K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39
Score = 25.6 bits (57), Expect = 7.0
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC C K FS + + H KLH E
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G K Y+CN C K F KS L H + H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 32.9 bits (76), Expect = 0.016
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C+ C K F K L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 32.9 bits (76), Expect = 0.016
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G K +CN C K F KS L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 32.9 bits (76), Expect = 0.016
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 455
G K +CN C K F KS L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 31.0 bits (71), Expect = 0.073
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y+CN C K F K L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F KS L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 30.2 bits (69), Expect = 0.12
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
G K +C C K F KS L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 30.2 bits (69), Expect = 0.14
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y+C+ C K F K L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 29.4 bits (67), Expect = 0.23
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 29.0 bits (66), Expect = 0.40
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C+ C K F K L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 27.1 bits (61), Expect = 1.8
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C+ C K F K + H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 26.3 bits (59), Expect = 2.8
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQG 563
G K +C+ C K F K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG 37
Score = 26.0 bits (58), Expect = 4.9
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C C K F K L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 26.0 bits (58), Expect = 4.9
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C C K F K L H + H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVS 39
Score = 25.2 bits (56), Expect = 7.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y+C+ C K + +K L H + H G
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAG 37
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F+ S+LT H ++H E
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F+ SHL H ++H G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.007
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ S+LT H + H G K +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.029
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KCN C K F+ SHL H ++H G
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.064
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F+ +LT H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 30.5 bits (70), Expect = 0.10
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F + +LT H ++H G K
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ S+LT H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.16
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F + +LT H ++H G K
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 29.4 bits (67), Expect = 0.24
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F++ LT H ++H G
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG 37
Score = 27.8 bits (63), Expect = 1.2
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F+ LT H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 27.1 bits (61), Expect = 1.7
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K ++ LT H ++H G +
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F+ LT H ++H G +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.3
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F++ LT H ++H G K + +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.3
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F++ LT H ++H G K + +
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 25.1 bits (56), Expect = 8.8
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K F+ +T H ++H G K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 25.1 bits (56), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
YKC+ C K ++ +LT H ++H G K
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEK 39
Score = 25.1 bits (56), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
YKC+ C K ++ +LT H ++H G K
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEK 39
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G + +KCN C K F +S+L H++LH E +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G + KC C K F +S+L H++ H K +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 33.3 bits (77), Expect = 0.012
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G + KCN C K F +SHL H+++H + +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 32.1 bits (74), Expect = 0.026
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+KCN C K F R+ +L H++LH K
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 31.7 bits (73), Expect = 0.036
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G + KCN C K F +SHL H+++H
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37
Score = 31.7 bits (73), Expect = 0.041
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+KC+ C K F R+ +L H+++H K
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 31.0 bits (71), Expect = 0.075
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G + KC C K F +S+L H++LH K
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G R +KC+ C K F + +L H+++H K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G R +KC+ C K F R+ L H++LH
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR 37
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G + KC+ C K F + L H++LH K
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 27.1 bits (61), Expect = 1.8
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+KC+ C K + + L H++LH +
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 26.7 bits (60), Expect = 2.5
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
KC C K F R+ L H++LH K + +
Sbjct: 14 KCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 26.7 bits (60), Expect = 2.5
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
KC C K F R+ L H++LH K + +
Sbjct: 14 KCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 26.7 bits (60), Expect = 2.9
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G + KC+ C K F + L H++LH +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 26.0 bits (58), Expect = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
+KC+ C K + + +L HL+LH K
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREK 39
Score = 26.0 bits (58), Expect = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
+KC+ C K + + +L HL+LH K
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREK 39
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC+ C K F+ KS L H + H E
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 33.6 bits (78), Expect = 0.009
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ KS L H + H G + +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 33.6 bits (78), Expect = 0.009
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K KC+ C K F+ KS L H Q H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 32.1 bits (74), Expect = 0.032
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K KC+ C K F+ KS L H Q H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 30.9 bits (71), Expect = 0.088
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKC+ C K F RK L H + H G +
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 30.6 bits (70), Expect = 0.099
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ KS L H + H G +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC C K F+ K L H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC C K F RK L H + H G +
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 30.2 bits (69), Expect = 0.16
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC C K F+RK L H + H G
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG 37
Score = 29.4 bits (67), Expect = 0.28
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K F+ K L H + H G +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
Score = 28.2 bits (64), Expect = 0.81
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC C K F+ K L H + H G R
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 27.1 bits (61), Expect = 1.8
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F+RK L H + H G + + +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F+RK L H + H G + + +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 26.3 bits (59), Expect = 3.5
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC C K ++ K L H + H G R
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 25.5 bits (57), Expect = 6.1
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC C K F+ K + H + H G +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER 39
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y C C K F+ +S L +H K+H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C C K F+ +S L +H K H K +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 33.3 bits (77), Expect = 0.011
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K C C K F+ +S+L +H ++H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 31.7 bits (73), Expect = 0.042
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K C C K F+ +S+L +H ++H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 31.3 bits (72), Expect = 0.058
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C C K F+ + L +H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 30.9 bits (71), Expect = 0.073
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y C C K F + NL KH K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y C C K F + NL KH K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C K F+ +S L +H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C C K F+ + L +H K+H
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK 37
Score = 28.6 bits (65), Expect = 0.58
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C C K F+ + +L +H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 27.9 bits (63), Expect = 1.0
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K C C K F+ + L +H K+H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 26.7 bits (60), Expect = 2.5
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C C K ++ + L +H K+H +
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 26.3 bits (59), Expect = 3.2
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K C C K F+ + L +H K+H K + +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 26.3 bits (59), Expect = 3.2
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K C C K F+ + L +H K+H K + +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 26.3 bits (59), Expect = 3.4
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C C K F+ + ++ +H K+H K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQK 39
Score = 25.2 bits (56), Expect = 8.7
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K C C K F+ + + +H K+H +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F SYL+ H ++H E
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.005
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F S+L H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.006
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F SYL+ H + H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.019
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G K KCN C K F S+L H ++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37
Score = 31.7 bits (73), Expect = 0.047
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F YL+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.074
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F L++H ++H G K
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.090
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F SYL+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F L++H ++H G K
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 28.6 bits (65), Expect = 0.47
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F L+ H ++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG 37
Score = 27.9 bits (63), Expect = 0.98
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F L+ H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.3
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F L+ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
Score = 27.5 bits (62), Expect = 1.4
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K + + L+ H ++H G +
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.4
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F L+ H ++H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.4
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F L+ H ++H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.9
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC+ C K F Y++ H ++H E
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 5.6
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K F ++ H ++H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEK 39
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.002
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+C+ C K F KS L H ++H E
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 32.9 bits (76), Expect = 0.018
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K +C+ C K F KS L H ++H G +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 32.5 bits (75), Expect = 0.024
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K +C+ C K F KS L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 32.1 bits (74), Expect = 0.027
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C C K F KS L H + H G +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 31.4 bits (72), Expect = 0.048
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C C K F K L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 31.0 bits (71), Expect = 0.072
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F KS L H ++H G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 30.6 bits (70), Expect = 0.12
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C C K F +K +L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG 37
Score = 30.2 bits (69), Expect = 0.16
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y+C+ C K F +K L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y+C C K F +K L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 28.7 bits (65), Expect = 0.53
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K F K L H ++H G
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 27.9 bits (63), Expect = 0.96
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C C K F K L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 26.0 bits (58), Expect = 5.3
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K + K L H ++H G
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 26.0 bits (58), Expect = 5.4
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C C K F +K +L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 26.0 bits (58), Expect = 5.4
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C C K F +K +L H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 25.6 bits (57), Expect = 6.5
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C K F K + H ++H G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGEN 39
Score = 25.2 bits (56), Expect = 7.7
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K +C C K F K + H ++H E
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKC 217
+G K Y+C+ C K FS LT+H H +E
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
+G K +C C K FS LT+H H K +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 32.9 bits (76), Expect = 0.017
Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K +C+ C K FS L +H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 32.1 bits (74), Expect = 0.030
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
+G + Y+C C K FS LT+H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 31.7 bits (73), Expect = 0.037
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C+ C K FS L +H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37
Score = 31.4 bits (72), Expect = 0.048
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+G Y+C+ C K F LT+H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 31.4 bits (72), Expect = 0.048
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 287 HMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+G Y+C C K F LT+H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 31.4 bits (72), Expect = 0.048
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
+G K +C C K FS LT+H H K
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 31.0 bits (71), Expect = 0.079
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
+G + Y+C C K FS RLT+H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR 37
Score = 28.7 bits (65), Expect = 0.50
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K +S + LT+H H +
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 28.3 bits (64), Expect = 0.61
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
+G K +C C K FS LT+H H K
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 28.3 bits (64), Expect = 0.61
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C C K FS + LT+H H +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 27.5 bits (62), Expect = 1.4
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
+G K +C C K FS RLT+H H K + +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 27.5 bits (62), Expect = 1.4
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
+G K +C C K FS RLT+H H K + +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 26.4 bits (59), Expect = 3.8
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
+G K +C C K FS +T+H H K
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 25.2 bits (56), Expect = 8.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
Y+C C K +S LT+H H K
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREK 39
Score = 25.2 bits (56), Expect = 8.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
Y+C C K +S LT+H H K
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREK 39
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC+ C K F ++L EH ++H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 34.0 bits (79), Expect = 0.007
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F ++L EH + H G + +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 33.6 bits (78), Expect = 0.009
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC+ C K F +HL EH ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 31.7 bits (73), Expect = 0.040
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KC+ C K F +HL EH ++H G
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 31.3 bits (72), Expect = 0.064
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F ++L EH ++H G +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 30.9 bits (71), Expect = 0.067
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC+ C K F+R +L +H ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 30.9 bits (71), Expect = 0.081
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC C K F +L EH ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 30.5 bits (70), Expect = 0.092
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC C K F R L EH ++H G
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG 37
Score = 30.5 bits (70), Expect = 0.10
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC C K F+R +L +H ++H G +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 28.2 bits (64), Expect = 0.71
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K F L EH ++H G +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYR 39
Score = 27.5 bits (62), Expect = 1.4
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC C K F L EH ++H G R
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 27.5 bits (62), Expect = 1.6
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F R L EH ++H G + + +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 27.5 bits (62), Expect = 1.6
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F R L EH ++H G + + +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 27.1 bits (61), Expect = 2.2
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC C K + L EH ++H G R
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 178 EHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G + Y+C+ C K F KS L+ H ++H+ E
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.010
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 151 EHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G ++ +C C K F KS L+ H + H+G K +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.010
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 421 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G ++ +C+ C K F KS L H ++H+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.039
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 259 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G ++ +C+ C K F KS L H ++H+G
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.046
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 124 EHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G R Y+C C K F K L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 556 EHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G R Y+C C K F +K L+ H ++H G
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG 37
Score = 30.6 bits (70), Expect = 0.12
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G ++ +C C K F KS L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 448 EHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y+C+ C K F +K L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 286 EHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y+C C K F +K L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 28.3 bits (64), Expect = 0.74
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 529 EHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G ++ +C C K F K TL+ H ++H+G +
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 28.3 bits (64), Expect = 0.78
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G + +C C K F K +L+ H ++H+G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 25.9 bits (58), Expect = 4.7
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 232 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G ++ +C C K F +K L+ H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 25.9 bits (58), Expect = 4.7
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 394 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G ++ +C C K F +K L+ H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
Score = 25.6 bits (57), Expect = 6.0
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K + K TL+ H ++H+G +
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 25.6 bits (57), Expect = 7.1
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 502 EHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G + +C C K F K +++ H ++H G K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEK 39
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y C C K FS L +H +LH E
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C C K FS L +H + H G K +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.015
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K C C K FS L +H ++H G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.041
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K C C K FS L +H ++H G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37
Score = 31.7 bits (73), Expect = 0.043
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C C K FS L +H ++H G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 31.3 bits (72), Expect = 0.051
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y C C K F R L KH +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 31.3 bits (72), Expect = 0.064
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C C K FSR L +H +LH G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG 37
Score = 31.0 bits (71), Expect = 0.084
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C K FS L +H +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 31.0 bits (71), Expect = 0.084
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y C C K F R L KH ++H G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 28.3 bits (64), Expect = 0.82
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C C K FS L +H +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
Score = 27.5 bits (62), Expect = 1.2
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K C C K FS L +H +LH G +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.6
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K C C K FSR L +H +LH G K + +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.6
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K C C K FSR L +H +LH G K + +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.5
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C C K +S L +H +LH G +
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 26.0 bits (58), Expect = 4.6
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C C K FS + +H +LH G K
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEK 39
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 34.9 bits (81), Expect = 0.003
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G K Y+C+ C K FS K L H+++H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 34.1 bits (79), Expect = 0.006
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C+ C K FS K L H++VH G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 34.1 bits (79), Expect = 0.006
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
G K +C+ C K FS K L H++VH G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 33.3 bits (77), Expect = 0.011
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+CD C K FS+KG L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 32.9 bits (76), Expect = 0.012
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+CD C K FS K L H++VH G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 32.2 bits (74), Expect = 0.028
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y+CD C K F +K +L H++VH G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 31.8 bits (73), Expect = 0.038
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y+C+ C K F +K +L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 31.8 bits (73), Expect = 0.041
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K FS K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 31.4 bits (72), Expect = 0.044
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +CD C K FS K SL H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 30.6 bits (70), Expect = 0.10
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK 187
G K +C C K FS K L H++ H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 29.1 bits (66), Expect = 0.34
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQG 563
G K +CD C K FS K +L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 28.7 bits (65), Expect = 0.41
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +CD C K FS K S+ H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 27.5 bits (62), Expect = 1.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y+CD C K +S K +L H+++H G
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTG 36
Score = 27.1 bits (61), Expect = 1.4
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C C K FS+K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 27.1 bits (61), Expect = 1.4
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C C K FS+K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 25.6 bits (57), Expect = 6.2
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH 372
G K +CD C K FS K + H+++H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 25.6 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 206 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 241
E Y+CD C K +S K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 25.6 bits (57), Expect = 6.3
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 368 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 403
E Y+CD C K +S K L H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
K YKC C K ++ + L H ++H E T
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 33.6 bits (78), Expect = 0.009
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
K KC C K ++ + L H + H G K +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 33.6 bits (78), Expect = 0.010
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
K KC C K ++ + +L H +VH G T +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 33.2 bits (77), Expect = 0.013
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K + R+ NL H +VH G K
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 32.5 bits (75), Expect = 0.020
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKC C K + R+ NL H ++H G K
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 32.1 bits (74), Expect = 0.026
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
+ YKC+ C K ++ + L H +VH G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 32.1 bits (74), Expect = 0.031
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
+ YKC+ C K ++R+ L H ++H+G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG 37
Score = 32.1 bits (74), Expect = 0.032
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
K KC C K ++ + +L H +VH G T
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 30.5 bits (70), Expect = 0.094
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
K KC C K ++ + L H ++H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 29.4 bits (67), Expect = 0.31
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
K KC+ C K ++ + +L H ++H G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 29.0 bits (66), Expect = 0.45
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
K KC+ C K ++ + L H ++H G +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 28.2 bits (64), Expect = 0.68
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
K KC C K ++R+ L H ++H+G K + +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 28.2 bits (64), Expect = 0.68
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
K KC C K ++R+ L H ++H+G K + +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 27.8 bits (63), Expect = 0.95
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K Y+ + L H ++H G +
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 26.3 bits (59), Expect = 3.7
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
K KC+ C K ++ + ++ H ++H+G K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 25.1 bits (56), Expect = 8.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
YKC+ C K Y+ ++ L H ++H G K
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 25.1 bits (56), Expect = 8.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
YKC+ C K Y+ ++ L H ++H G K
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEK 39
Score = 25.1 bits (56), Expect = 8.8
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
K KC+ C K ++ + + H ++H E T
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 35.2 bits (82), Expect = 0.003
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC C K F C+ L H VH G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC C K F + L H +H E
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.008
Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KC C K F C+ L H VH G
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.012
Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F + L H H G K +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.018
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F C+R L H VH G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 30.6 bits (70), Expect = 0.097
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC C K F +++L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC+ C K F +++L H VH G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 30.2 bits (69), Expect = 0.17
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 29.4 bits (67), Expect = 0.27
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F + L H +H G
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG 37
Score = 27.9 bits (63), Expect = 0.98
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F + L H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 27.9 bits (63), Expect = 1.0
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K F C+R + H +H G K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEK 39
Score = 27.9 bits (63), Expect = 1.0
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F + L H +H G +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.8
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K + + L H +H G +
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.8
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC+ C K F C+R + H +H E
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 4.6
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F +R L H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 4.6
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F +R L H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 34.8 bits (81), Expect = 0.003
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K ++C C K F +K L H ++H E +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 34.4 bits (80), Expect = 0.005
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K +C C K F K +L H ++H G + +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 33.7 bits (78), Expect = 0.008
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C C K F +K L H + H G K +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 32.5 bits (75), Expect = 0.022
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K +C C K F K +L H ++H G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 31.4 bits (72), Expect = 0.052
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
++C C K F K NL H ++H G K
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 31.0 bits (71), Expect = 0.071
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + ++C C K F K L H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.092
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + ++C C K F KG L H ++H G
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG 37
Score = 30.6 bits (70), Expect = 0.098
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
++C C K F K NL H ++H G K
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.14
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F +K L H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 28.3 bits (64), Expect = 0.58
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K F K +L H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 27.9 bits (63), Expect = 1.0
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C C K F K L H ++H G +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 27.1 bits (61), Expect = 1.8
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 272
G K +C C K F K L H ++H G K+ +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 434
G K +C C K F K L H ++H G K+ +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 26.3 bits (59), Expect = 3.2
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C K F K ++ H ++H G K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEK 39
Score = 26.3 bits (59), Expect = 3.5
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
++C C K + K L H ++H G +
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 25.6 bits (57), Expect = 6.7
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K +C C K F K + H ++H E +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 34.6 bits (80), Expect = 0.003
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHL 589
+ GI+ ++C C + FSR L H K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 34.6 bits (80), Expect = 0.003
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
+ GIK ++C C + FS +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 34.2 bits (79), Expect = 0.004
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVH 318
+ GI ++C C + F R +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.5 bits (77), Expect = 0.009
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLH 480
+ GI ++C C + F R +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.1 bits (76), Expect = 0.012
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRH 183
+ G+K +C C + FS +L H KRH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 32.3 bits (74), Expect = 0.020
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHL 265
+ GIK +C C + FSR L H K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 32.3 bits (74), Expect = 0.020
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHL 427
+ GIK +C C + FSR L H K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 32.3 bits (74), Expect = 0.023
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVH 291
+ GIK +C C + FS HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 32.3 bits (74), Expect = 0.023
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVH 453
+ GIK +C C + FS HL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.5 bits (72), Expect = 0.036
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVH 156
+ GI+ ++C C + FS +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.8 bits (70), Expect = 0.087
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLH 345
+ G+K +C C + FS +L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 29.2 bits (66), Expect = 0.23
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLH 507
+ GIK +C C + FS L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 29.2 bits (66), Expect = 0.31
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLH 561
+ GIK +C C + FS L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 27.7 bits (62), Expect = 0.81
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHL 535
+ GIK +C C + FS + H K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 26.5 bits (59), Expect = 2.1
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH 372
+ GIK +C C + FS ++ H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.0 bits (55), Expect = 9.8
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLH 129
++C C + +S L H K H
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRH 34
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+C++C K FS + LT+H ++H E
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C +C K FS + LT+H + H G K +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.014
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K +C++C K FS + L +H +VH G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.041
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+CD+C K FS LT+H +VH G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 31.3 bits (72), Expect = 0.055
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C++C K FS + L +H +VH G
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37
Score = 30.2 bits (69), Expect = 0.15
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C +C K FS + LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C++C K F +LT+H ++H G K
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+CD+C K FS LT+H ++H G
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG 37
Score = 29.8 bits (68), Expect = 0.19
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+CD+C K F +LT+H +VH G K
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 28.6 bits (65), Expect = 0.50
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +CD+C K FS SLT+H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 27.9 bits (63), Expect = 1.0
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+CD+C K +S+ +LT+H ++H G +
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.2
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +CD+C K FS +LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.2
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +CD+C K FS S+T+H ++H G K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEK 39
Score = 26.3 bits (59), Expect = 4.0
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K +C +C K FS LT+H ++H G K + +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 26.3 bits (59), Expect = 4.0
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K +C +C K FS LT+H ++H G K + +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G Y+C+ C K FS K L H + H E
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G +C+ C K FS K L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.009
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G +C C K FS K L H + H G K +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.037
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G +C+ C K FS K L H + H G
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.065
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G Y+C C K FS K L H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G Y+C C K FSRK +L H + H G
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG 37
Score = 30.6 bits (70), Expect = 0.12
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C+ C K F RK L H + H G K
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 29.8 bits (68), Expect = 0.19
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C C K F RK L H + H G K
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 29.4 bits (67), Expect = 0.27
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G +C C K FS K L H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 27.5 bits (62), Expect = 1.3
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G +C C K FS K L H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G +C C K FS K+ L H + H G +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.7
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K +S K+ L H + H G +
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.2
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G +C C K FSRK +L H + H G K + +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.2
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G +C C K FSRK +L H + H G K + +
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.8
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G +C C K FS K + H + H G K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEK 39
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F + S LT H +H E
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.009
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F S+L H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.010
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F + S LT H H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.030
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F LT H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 31.7 bits (73), Expect = 0.037
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KCN C K F S+L H +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.047
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F NLT H +H G K
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 31.3 bits (72), Expect = 0.049
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F NLT H +H G K
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 29.8 bits (68), Expect = 0.17
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F + S LT H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F LT H +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG 37
Score = 28.6 bits (65), Expect = 0.50
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F +LT H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 28.2 bits (64), Expect = 0.83
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F LT H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.5
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K + LT H +H G +
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.2
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F LT H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.2
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F LT H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.4
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K F ++T H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEK 39
Score = 25.2 bits (56), Expect = 9.3
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K KC+ C K F +T H +H E
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+CN C K FS S L H ++H E
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.007
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K +CN C K FS S L H +VH G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.014
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C C K FS S L H + H G K +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.030
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K +CN C K FS S L H +VH G
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.084
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K FS S L H ++H G K
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 30.6 bits (70), Expect = 0.098
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C+ C K FS L H +VH G K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+CN C K F + L +H ++H G K
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 29.8 bits (68), Expect = 0.23
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C+ C K F + L +H +VH G K
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 29.4 bits (67), Expect = 0.26
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C+ C K FS+ +L H ++H G
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG 37
Score = 28.7 bits (65), Expect = 0.44
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C+ C K FS L H ++H G K
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C+ C K FS L H ++H G +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.0
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C+ C K +S L H ++H G +
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 5.4
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K +C C K FS+ +L H ++H G K + +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 5.4
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K +C C K FS+ +L H ++H G K + +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 6.6
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C+ C K FS + H ++H G K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEK 39
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G+ YKC+ C K FS K L H ++H E
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 32.9 bits (76), Expect = 0.017
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G+ KC C K FS K L H + H K +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 32.5 bits (75), Expect = 0.024
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
KC+ C K FS K L H ++H +
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 31.4 bits (72), Expect = 0.053
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
KC+ C K FS K L H ++H
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTR 37
Score = 31.0 bits (71), Expect = 0.089
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
YKC C K FS K L H ++H K
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 30.6 bits (70), Expect = 0.092
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
YKC C K FS K RL H ++H
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTR 37
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKC+ C K F K L H ++H K
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 30.2 bits (69), Expect = 0.14
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC C K F K L H ++H K
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 29.8 bits (68), Expect = 0.22
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G+ KC C K FS K L H ++H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 28.3 bits (64), Expect = 0.73
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G+ KC C K FS K L H ++H K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 27.9 bits (63), Expect = 1.0
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC C K +S K L H ++H +
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 27.1 bits (61), Expect = 2.1
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
KC C K FS K L H ++H +
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 26.7 bits (60), Expect = 2.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
KC C K FS K RL H ++H K + +
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 26.7 bits (60), Expect = 2.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
KC C K FS K RL H ++H K + +
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 25.6 bits (57), Expect = 7.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
YKC C K +S K+ L H ++H K
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREK 39
Score = 25.6 bits (57), Expect = 7.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
YKC C K +S K+ L H ++H K
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREK 39
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC+ C K F S+L H +H E
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.005
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC+ C K F SHL H +H G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 33.6 bits (78), Expect = 0.008
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F S+L H H G K +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 32.4 bits (75), Expect = 0.023
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KC+ C K F SHL H +H G
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37
Score = 30.9 bits (71), Expect = 0.081
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC C K F +L H +H G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 30.5 bits (70), Expect = 0.11
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC+ C K F R +L +H +H G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 30.1 bits (69), Expect = 0.14
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F S+L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 30.1 bits (69), Expect = 0.16
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC C K F R L H +H G
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG 37
Score = 29.8 bits (68), Expect = 0.18
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC C K F R +L +H +H G K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 27.4 bits (62), Expect = 1.3
Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K F L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEK 39
Score = 27.1 bits (61), Expect = 1.8
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F R L H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F R L H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.2
Identities = 11/41 (26%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC C K F L H +H G +
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.6
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC C K + L H +H G +
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G + ++C+ C K F S +H ++H
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 32.5 bits (75), Expect = 0.022
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G + ++C C K F S +H ++H G K
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 32.1 bits (74), Expect = 0.032
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
++C C K F + N +H ++H G K
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.036
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
++C+ C K F + N +H ++H G K
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.094
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G R ++C C K F +H ++H G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.095
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G R ++C C K F + +H ++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 30.2 bits (69), Expect = 0.13
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G + ++C C K F S +H + H G K +
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.13
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G + +C C K F + +H ++H G K
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G + ++C+ C K F S+ +H ++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 30.2 bits (69), Expect = 0.13
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 455
G + ++C+ C K F S+ +H ++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 27.1 bits (61), Expect = 1.6
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQG 563
G + ++C C K F +H ++H G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG 37
Score = 26.7 bits (60), Expect = 2.1
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G + ++C C K F + +H ++H G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 26.7 bits (60), Expect = 2.1
Identities = 9/37 (24%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G + ++C C K F + +H ++H G K
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39
Score = 26.3 bits (59), Expect = 3.9
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
++C C K + +H ++H G
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTG 37
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.003
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+C C K F+ K+ LT+H ++H E
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C C K F+ K+ LT+H + H G K +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.013
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K +C C K F+ K++L +H ++H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.036
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C C K F +K NLT+H ++H G K
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.054
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C C K F +K NLT+H ++H G K
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.055
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C C K F+ K++L +H ++H G
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37
Score = 30.9 bits (71), Expect = 0.076
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C C K F+ K LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.099
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C C K F++K LT+H ++H G
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG 37
Score = 30.2 bits (69), Expect = 0.15
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F+ K+ LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 28.6 bits (65), Expect = 0.60
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K F+ K +LT+H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
Score = 27.9 bits (63), Expect = 0.94
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C C K F+ K LT+H ++H G +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.4
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K ++ K LT+H ++H G +
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.5
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K +C C K F++K LT+H ++H G K + +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 1.5
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K +C C K F++K LT+H ++H G K + +
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.0
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C K F+ K ++T+H ++H G K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEK 39
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 34.8 bits (81), Expect = 0.004
Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
K ++C+ C + F+ KS+L +H ++H
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 32.5 bits (75), Expect = 0.019
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
K ++C+ C + F+ KSHL +H ++H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 32.5 bits (75), Expect = 0.019
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 455
K ++C+ C + F+ KSHL +H ++H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.032
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
++C+ C + F K +L +H ++H G K
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 31.7 bits (73), Expect = 0.045
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
++C C + F K +L +H ++H G K
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 31.0 bits (71), Expect = 0.070
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
++C C + F+ K +L +H ++H G K
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 29.8 bits (68), Expect = 0.19
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
K ++C C + F+ KS+L +H ++H G K
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 29.8 bits (68), Expect = 0.20
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
++C C + F+ K L +H ++H G
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 27.9 bits (63), Expect = 0.82
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK 187
K ++C C + F+ KS+L +H + H G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 27.5 bits (62), Expect = 1.3
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
K +C C + F+ K L +H ++H G K
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 27.1 bits (61), Expect = 1.8
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
++C C + ++ K L +H ++H G
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTG 37
Score = 26.4 bits (59), Expect = 3.1
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
K ++C C + F+ K L +H ++H G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 26.4 bits (59), Expect = 3.1
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
K ++C C + F+ K L +H ++H G K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEK 39
Score = 26.4 bits (59), Expect = 3.3
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQG 563
K ++C C + F+ K L +H ++H G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG 37
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 34.8 bits (81), Expect = 0.004
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G+K Y C+ C+K FS KS L H + H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 32.9 bits (76), Expect = 0.015
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G+K C C+K FS KS L H + H G+K +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 32.9 bits (76), Expect = 0.016
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G+K C+ C+K FS KS L H + H G +
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 31.3 bits (72), Expect = 0.063
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G+K C+ C+K FS KS L H + H G
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 30.6 bits (70), Expect = 0.11
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G++ Y C C+K FS K L H + H G+K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G+K C C+K FS KS L H + H G+K
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y C+ C+K F K L H + H G+K
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 29.4 bits (67), Expect = 0.26
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C C+K F K L H + H G+K
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 29.0 bits (66), Expect = 0.38
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G++ Y C C K FS K +L H + H G
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG 37
Score = 28.7 bits (65), Expect = 0.55
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G+K C C+K FS K L H + H G+K
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 27.1 bits (61), Expect = 1.9
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G+K C C+K FS K L H + H G++
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 26.0 bits (58), Expect = 5.3
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G+K C C+K FS K +L H + H G+K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 26.0 bits (58), Expect = 5.3
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G+K C C+K FS K +L H + H G+K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
Score = 25.6 bits (57), Expect = 5.8
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C C+K +S K L H + H G++
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 25.2 bits (56), Expect = 9.7
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G+K C C+K FS K + H + H G+K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.004
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F ++S L H H E
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 34.1 bits (79), Expect = 0.006
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F +S L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.012
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F ++S L H H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.024
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KCN C K F +S L H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37
Score = 31.0 bits (71), Expect = 0.075
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F + L H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 30.6 bits (70), Expect = 0.12
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F + +L H H G K
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F ++S L H H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 29.4 bits (67), Expect = 0.30
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F + +L H H G K
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 28.7 bits (65), Expect = 0.51
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F + SL H H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
Score = 28.3 bits (64), Expect = 0.66
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F + L H H G
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG 37
Score = 27.1 bits (61), Expect = 1.6
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F + +L H H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.2
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K + + +L H H G +
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.4
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K F + S+ H H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEK 39
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.004
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+C++C K F+ KS L H ++H E
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.008
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K +C++C K F+ KS L H Q+H G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.016
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C +C K F+ KS L H + H G K +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.031
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K +C++C K F+ KS L H Q+H G
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.077
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C +C K F+ K L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C +C K F+ KS L H ++H G K
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 29.8 bits (68), Expect = 0.23
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y+C++C K F +K L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 29.4 bits (67), Expect = 0.29
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y+C +C K F +K L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 29.0 bits (66), Expect = 0.32
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C +C K F++K +L H ++H G
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG 37
Score = 28.3 bits (64), Expect = 0.73
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C +C K F+ K L H ++H G K
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 27.1 bits (61), Expect = 1.6
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C +C K F+ K L H ++H G +
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 6.4
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C +C K ++ K L H ++H G +
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 6.6
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C +C K F+ K + H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 25.2 bits (56), Expect = 9.1
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K +C +C K F+ K + H ++H E
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C +C K F++K +L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
Score = 25.2 bits (56), Expect = 9.4
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C +C K F++K +L H ++H G K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEK 39
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.8 bits (81), Expect = 0.004
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G + +KCN C K F ++L +H ++H E
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G + +KCN C K F +HL +H ++H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.010
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G + +KC C K F ++L +H + H G K +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.019
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G + +KCN C K F +HL +H ++H G
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.034
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G R +KC+ C K F +L +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G R +KC+ C K F + L +H ++H G
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG 37
Score = 30.2 bits (69), Expect = 0.15
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+KCN C K F + +L +H ++H G K
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G + +KC C K F ++L +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 29.4 bits (67), Expect = 0.24
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+KC+ C K F + +L +H ++H G K
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 27.1 bits (61), Expect = 1.6
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G + KC+ C K F L +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
Score = 26.7 bits (60), Expect = 2.2
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G + +KC+ C K F L +H ++H G +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.9
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+KC+ C K + L +H ++H G +
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.6
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G + +KC C K F + L +H ++H G K + +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.6
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G + +KC C K F + L +H ++H G K + +
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.5
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G + KC+ C K F + +H ++H G K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEK 39
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y C C K F S L EH ++H E
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.008
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C C K F S L EH + H G K +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.013
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K C C K F S L+EH ++H G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.046
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K C C K F S L+EH ++H G
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37
Score = 31.3 bits (72), Expect = 0.051
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C K F S L EH ++H G K
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 31.3 bits (72), Expect = 0.052
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C+ C K F L EH ++H G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.090
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y C+ C K F L +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.090
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y C C K F L +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.16
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C+ C K F +L EH ++H G
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG 37
Score = 29.4 bits (67), Expect = 0.28
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C+ C K F L EH ++H G K
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
Score = 27.5 bits (62), Expect = 1.2
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K C+ C K F L EH ++H G +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.5
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C+ C K + + L EH ++H G +
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.7
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K C C K F +L EH ++H G K + +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.7
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K C C K F +L EH ++H G K + +
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.9
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C+ C K F + EH ++H G K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEK 39
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G + Y+C C K F +KS L H + H E
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.015
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G + +C C K F KS L H + H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.016
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G + +C+ C K F +KS L H + H G K +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 31.4 bits (72), Expect = 0.051
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G + +C C K F KS L H + H G
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.061
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G R Y+C C K F K L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 30.6 bits (70), Expect = 0.12
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G + +C+ C K F +KS L H + H G K
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 29.4 bits (67), Expect = 0.28
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C C K F K +L H + H G K
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 29.0 bits (66), Expect = 0.32
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G R Y+C C K F K L H + H G
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG 37
Score = 29.0 bits (66), Expect = 0.38
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G + +C C K F TK SL H + H G K
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 28.7 bits (65), Expect = 0.44
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C C K F K +L H + H G K
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 27.5 bits (62), Expect = 1.3
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G + +C C K F TK +L H + H G +
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.3
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K + K +L H + H G +
Sbjct: 13 YECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 4.7
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G + +C C K F K S+ H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 25.6 bits (57), Expect = 6.8
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G + +C+ C K F K L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
Score = 25.6 bits (57), Expect = 6.8
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G + +C+ C K F K L H + H G K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEK 39
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.004
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC C K ++SK L H K+H E
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 33.7 bits (78), Expect = 0.008
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K ++SK L H K H G + +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 33.7 bits (78), Expect = 0.009
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC C K ++ K +L H +VH G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 31.7 bits (73), Expect = 0.035
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KC C K ++ K +L H +VH G
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 31.3 bits (72), Expect = 0.054
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K ++ K L H KVH G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 31.0 bits (71), Expect = 0.070
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K ++SK L H K+H G +
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 31.0 bits (71), Expect = 0.076
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC+ C K + K NL H KVH G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 30.6 bits (70), Expect = 0.097
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC C K + K NL H K+H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K ++ K L H K+H G
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG 37
Score = 29.4 bits (67), Expect = 0.25
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K +++K +L H K+H G +
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
Score = 29.0 bits (66), Expect = 0.41
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K +++K L H K+H G R
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 27.5 bits (62), Expect = 1.5
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K Y+ K L H K+H G R
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 26.0 bits (58), Expect = 5.2
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K ++ K L H K+H G + + +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 26.0 bits (58), Expect = 5.2
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K ++ K L H K+H G + + +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 26.0 bits (58), Expect = 5.5
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K ++ K ++ H K+H G +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.004
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F+ S+L H ++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 34.0 bits (79), Expect = 0.005
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F+ SHL H ++H G+ +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 32.9 bits (76), Expect = 0.015
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ S+L H + H G+K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 32.5 bits (75), Expect = 0.024
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KCN C K F+ SHL H ++H G+
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 31.0 bits (71), Expect = 0.081
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F+ +L H ++H G+K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ S+L H ++H G+K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F + +L H ++H G+K
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 29.8 bits (68), Expect = 0.20
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F + +L H ++H G+K
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 29.4 bits (67), Expect = 0.31
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F++ L H ++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG 37
Score = 28.3 bits (64), Expect = 0.76
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F+ L H ++H G+K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVK 39
Score = 26.7 bits (60), Expect = 2.9
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F+ L H ++H G++
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 26.3 bits (59), Expect = 3.8
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K ++ L H ++H G++
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 25.9 bits (58), Expect = 4.2
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F++ L H ++H G+K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 25.9 bits (58), Expect = 4.2
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F++ L H ++H G+K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.004
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K ++C C K FS S L H ++H E
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 34.0 bits (79), Expect = 0.007
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K ++C C K FS S L H ++H G +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 32.9 bits (76), Expect = 0.014
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K ++C C K FS S L H + H G +
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 32.5 bits (75), Expect = 0.020
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G K ++C C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.032
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + ++C C K FS L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 31.0 bits (71), Expect = 0.066
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K ++C C K FS S L H ++H G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 29.0 bits (66), Expect = 0.33
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + ++C C K FS +L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG 37
Score = 29.0 bits (66), Expect = 0.40
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K FS L H ++H G
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 29.0 bits (66), Expect = 0.42
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G ++C C K F L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 28.3 bits (64), Expect = 0.61
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G ++C C K F L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 27.5 bits (62), Expect = 1.5
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K ++C C K FS L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 26.3 bits (59), Expect = 3.1
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C K FS + H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 26.0 bits (58), Expect = 4.2
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
++C C K +S+ L H ++H G
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 26.0 bits (58), Expect = 5.5
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K ++C C K FS +L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 26.0 bits (58), Expect = 5.5
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K ++C C K FS +L H ++H G
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGEN 39
Score = 25.2 bits (56), Expect = 7.9
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 341 HMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKC 379
G K ++C C K FS + H ++H E
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 421 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K +C C K F+ SHL H +VH G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 34.1 bits (79), Expect = 0.005
Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 178 EHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K ++C C K F+ S+L H ++H E
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.009
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 151 EHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C C K F+ S+L H + H G K +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.016
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 259 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C C K F+ SHL H +VH G
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37
Score = 31.4 bits (72), Expect = 0.058
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 124 EHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + ++C+ C K F+ +L H +VH G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F+ S+L H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 29.8 bits (68), Expect = 0.22
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 556 EHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + ++C+ C K F++ L H ++H G
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG 37
Score = 29.4 bits (67), Expect = 0.24
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 286 EHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G ++C+ C K F + +L H +VH G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 29.4 bits (67), Expect = 0.28
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 448 EHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G ++C C K F + +L H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 27.9 bits (63), Expect = 0.96
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C+ C K F+ L H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
Score = 27.1 bits (61), Expect = 2.1
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 529 EHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C+ C K F+ L H ++H G +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 26.0 bits (58), Expect = 4.5
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 232 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K +C C K F++ L H ++H G K + +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 26.0 bits (58), Expect = 4.5
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 394 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K +C C K F++ L H ++H G K + +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 25.2 bits (56), Expect = 8.1
Identities = 7/31 (22%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
++C+ C K ++ L H ++H G +
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 10.0
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 502 EHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C+ C K F+ + H ++H G K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEK 39
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G + Y C +C K F+ +S L +H K+H E
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.013
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G + C +C K F+ +S+L +H ++H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.014
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G + C +C K F+ +S L +H K H G K +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.053
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G + C +C K F+ +S+L +H ++H G
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.058
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y C +C K F + NL KH K+H G K
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 30.9 bits (71), Expect = 0.077
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C +C K F + NL KH K+H G K
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 30.9 bits (71), Expect = 0.090
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G R Y C +C K F+ + L +H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 29.8 bits (68), Expect = 0.19
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G R Y C +C K F+ + L +H K+H G
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG 37
Score = 29.8 bits (68), Expect = 0.21
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G + C +C K F+ +S L +H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 27.8 bits (63), Expect = 0.96
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G + C +C K F+ + +L +H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
Score = 27.5 bits (62), Expect = 1.4
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C +C K ++ + L +H K+H G +
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 1.5
Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G + C +C K F+ + L +H K+H G +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 4.8
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G + C +C K F+ + L +H K+H G K + +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.8
Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G + C +C K F+ + L +H K+H G K + +
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 6.2
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G + C +C K F+ + ++ +H K+H G K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEK 39
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+C C K FS ++L +H ++H E
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.010
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K +C C K FS +HL +H +VH G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.011
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C C K FS ++L +H + H G K +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.033
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C C K FS +HL +H +VH G
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37
Score = 30.9 bits (71), Expect = 0.071
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C C K FS +L +H +VH G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 30.9 bits (71), Expect = 0.086
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K FS ++L +H ++H G K
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 30.2 bits (69), Expect = 0.16
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G Y+C C K F + +L +H ++H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 29.8 bits (68), Expect = 0.23
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C C K FS+ L +H ++H G
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG 37
Score = 29.4 bits (67), Expect = 0.25
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G Y+C C K F + +L +H +VH G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 28.2 bits (64), Expect = 0.82
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K FS L +H ++H G K
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
Score = 26.7 bits (60), Expect = 2.9
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C C K FS L +H ++H G +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 4.3
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K +C C K FS+ L +H ++H G K + +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.3
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K +C C K FS+ L +H ++H G K + +
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 5.1
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K +S L +H ++H G +
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 9.7
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C K FS + +H ++H G K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEK 39
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F+ S+L H +H E
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.011
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F+ SHL H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 32.8 bits (76), Expect = 0.017
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ S+L H H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.040
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KCN C K F+ SHL H +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37
Score = 30.1 bits (69), Expect = 0.17
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F+ +L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F + +L +H +H G K
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 29.4 bits (67), Expect = 0.27
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 29.0 bits (66), Expect = 0.44
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F + +L +H +H G K
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 28.6 bits (65), Expect = 0.51
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F++ L H +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG 37
Score = 26.7 bits (60), Expect = 2.2
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F+ L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEK 39
Score = 26.3 bits (59), Expect = 4.1
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K ++ L H +H G +
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 4.4
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F+ L H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 4.7
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F++ L H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.7
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F++ L H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K + C C K FS L +H ++H E
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.036
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K C C K FS L +H ++H G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.038
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C+ C K FS L +H + H G K +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.039
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K C C K FS L +H ++H G
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37
Score = 31.3 bits (72), Expect = 0.061
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + + C C K FS L +H ++H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.086
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C+ C K FS L +H ++H G K
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+ C C K F L +H ++H G K
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 29.4 bits (67), Expect = 0.26
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+ C C K F L +H ++H G K
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 29.4 bits (67), Expect = 0.26
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + + C C K FS L +H ++H G
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG 37
Score = 29.0 bits (66), Expect = 0.36
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C C K FS L +H ++H G K
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 27.5 bits (62), Expect = 1.2
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K C C K FS L +H ++H G +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 2.9
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+ C C K +S L +H ++H G +
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.3
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C C K FS + +H ++H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 25.9 bits (58), Expect = 4.7
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K C+ C K FS L +H ++H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
Score = 25.9 bits (58), Expect = 4.7
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K C+ C K FS L +H ++H G K
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEK 39
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K +KC C FS S L H +H E
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.018
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
KC C FS S L+ H VH G +
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.024
Identities = 13/42 (30%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C FS S L H H G K +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.045
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
KC C FS S L+ H VH G
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVG 37
Score = 30.6 bits (70), Expect = 0.092
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+KC C F + +L H VH G K
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 30.6 bits (70), Expect = 0.097
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
+KC C FS L H VH G K
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+KC C F + +L H +H G K
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 30.2 bits (69), Expect = 0.16
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
+KC C FS+ L H +H+G
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVG 37
Score = 29.4 bits (67), Expect = 0.27
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C FS S L H +H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 28.3 bits (64), Expect = 0.66
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+KC C +S +L H +H G +
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.0
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C FS SL H +H G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
Score = 27.1 bits (61), Expect = 1.7
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
KC C FS +L H +H G +
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 26.4 bits (59), Expect = 3.3
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
KC C FS+ L H +H+G K + +
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 26.4 bits (59), Expect = 3.3
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
KC C FS+ L H +H+G K + +
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 25.2 bits (56), Expect = 9.7
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC C FS S+ H +H+G K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEK 39
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K ++C+ C K F++KS L H + H E
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.079
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
G K +C C K F++KS L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 30.5 bits (70), Expect = 0.10
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K +C+ C K F+ KS+L H + H G
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 30.5 bits (70), Expect = 0.10
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 460
G K +C+ C K F+ KS+L H + H G
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 30.1 bits (69), Expect = 0.15
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
++C+ C K F K NL H + H G K
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 29.8 bits (68), Expect = 0.19
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + ++C C K F+ K L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 29.4 bits (67), Expect = 0.26
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
++C C K F K NL H + H G K
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 28.6 bits (65), Expect = 0.49
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F++KS L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 28.2 bits (64), Expect = 0.68
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + ++C C K F+ K L H + H G
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG 37
Score = 26.7 bits (60), Expect = 2.7
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K F+TK +L H + H G K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEK 39
Score = 26.3 bits (59), Expect = 3.9
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C C K F+TK L H + H G +
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 25.1 bits (56), Expect = 8.9
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
++C C K ++ K L H + H G +
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.005
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K +KC C K ++ + +LT+H ++H E
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.006
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC C K ++ + HL +H +VH G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.011
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K ++ + +LT+H + H G K +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.025
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KC C K ++ + HL +H +VH G
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37
Score = 31.7 bits (73), Expect = 0.038
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + +KC C K ++ + +LT+H +VH G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 31.3 bits (72), Expect = 0.052
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+KC C K + ++ +LT+H ++H G K
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.066
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+KC C K + ++ +LT+H +VH G K
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.074
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K ++ + +LT+H ++H G K
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 30.6 bits (70), Expect = 0.10
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + +KC C K ++++ LT+H ++H G
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG 37
Score = 29.0 bits (66), Expect = 0.43
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K ++ + LT+H ++H G K
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
Score = 27.5 bits (62), Expect = 1.4
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC C K ++ + LT+H ++H G +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 2.0
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K ++++ LT+H ++H G K + +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.0
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K ++++ LT+H ++H G K + +
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 2.2
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+KC C K Y+ + LT+H ++H G +
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 25.6 bits (57), Expect = 7.5
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC C K ++ + +T+H ++H G K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.4 bits (80), Expect = 0.005
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y CN C K F KS+L H ++H E
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.012
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K CN C K F KSHL H ++H G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.019
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C C K F KS+L H + H G K +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.039
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K CN C K F KSHL H ++H G
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37
Score = 30.9 bits (71), Expect = 0.066
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y CN C K F +K +L +H ++H G K
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 30.6 bits (70), Expect = 0.094
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C K F KS+L H ++H G K
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.12
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C+ C K F +K +L +H ++H G K
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.14
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C+ C K F K +L H ++H G K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 29.8 bits (68), Expect = 0.19
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C+ C K F +K L H ++H G
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG 37
Score = 27.9 bits (63), Expect = 0.97
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C+ C K F K L H ++H G K
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEK 39
Score = 25.9 bits (58), Expect = 4.4
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K C C K F +K L H ++H G K + +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.4
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K C C K F +K L H ++H G K + +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 5.7
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K C+ C K F K L H ++H G +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 9.8
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C+ C K + K L H ++H G +
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.005
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+C +CSK F+ K++L +H K H E
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.017
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G K +C +CSK F+ K+HL +H + H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.021
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C +CSK F+ K++L +H K H G K +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.053
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C +CSK F+ K+HL +H + H G
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37
Score = 30.6 bits (70), Expect = 0.11
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C +CSK F+ K++L +H K H G K
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 30.6 bits (70), Expect = 0.12
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C +CSK F+ K +L +H K H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 30.6 bits (70), Expect = 0.12
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C +CSK F +K +L +H K H G K
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 29.8 bits (68), Expect = 0.20
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C +CSK F +K +L +H K H G K
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 29.4 bits (67), Expect = 0.31
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C +C+K F++K L +H K H G
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG 37
Score = 28.3 bits (64), Expect = 0.69
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C +CSK F+ K L +H K H G K
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 26.0 bits (58), Expect = 4.2
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C +CSK F+ K L +H K H G +
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 8.0
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C +CSK ++ K L +H K H G +
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 25.2 bits (56), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C +CSK F++K L +H K H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
Score = 25.2 bits (56), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C +CSK F++K L +H K H G K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEK 39
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.006
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 178 EHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKC +C K F S+L +H +H E
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 34.0 bits (79), Expect = 0.007
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 421 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC +C K F SHL +H VH G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 33.6 bits (78), Expect = 0.009
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 151 EHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC +C K F S+L +H H G + +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 31.7 bits (73), Expect = 0.036
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 259 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKC 298
G K KC +C K F SHL +H VH G
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 31.3 bits (72), Expect = 0.060
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 124 EHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC +C K F +L +H VH G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC +C K F S+L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKC +C K F +L +H +H G +
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 29.4 bits (67), Expect = 0.24
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC +C K F +L +H VH G +
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 29.0 bits (66), Expect = 0.33
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 556 EHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC +C K F L +H +H G
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG 37
Score = 27.1 bits (61), Expect = 1.8
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC +C K F L +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
Score = 26.7 bits (60), Expect = 2.3
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 529 EHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC +C K F L +H +H G R
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 26.7 bits (60), Expect = 2.4
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC +C K + L +H +H G R
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 26.7 bits (60), Expect = 2.9
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 232 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC +C K F L +H +H G + + +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 26.7 bits (60), Expect = 2.9
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 394 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC +C K F L +H +H G + + +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 25.2 bits (56), Expect = 9.1
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 502 EHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC +C K F + +H +H G +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGER 39
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.006
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F+ S+L H +H E
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.016
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F+ SHL H +H G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.020
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ S+L H H G K +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.074
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KCN C K F+ SHL H +H G
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 30.2 bits (69), Expect = 0.15
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F + +L +H +H G K
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 29.8 bits (68), Expect = 0.23
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F+ +L H +H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 29.4 bits (67), Expect = 0.28
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F + +L +H +H G K
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 29.0 bits (66), Expect = 0.35
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ S+L H +H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 28.6 bits (65), Expect = 0.49
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F++ L H +H G
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 26.7 bits (60), Expect = 2.8
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F+ L H +H G K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 26.3 bits (59), Expect = 3.8
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F+ L H +H G +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 25.5 bits (57), Expect = 6.0
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K ++ L H +H G +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 25.5 bits (57), Expect = 6.3
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F++ L H +H G K + +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 6.3
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F++ L H +H G K + +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.006
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y+C C K F+ +S L H K+H E
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.051
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
G K +C C K F+ +S L H K H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.057
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 298
G K +C C K F+ +S+L H ++H G
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.057
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKC 460
G K +C C K F+ +S+L H ++H G
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.072
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C C K F + NL H K+H G K
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 30.9 bits (71), Expect = 0.075
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C C K F + NL H K+H G K
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 30.6 bits (70), Expect = 0.098
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y+C C K F+ + L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F+ +S L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 29.4 bits (67), Expect = 0.27
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y+C C K F+ + L H K+H G
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG 37
Score = 28.2 bits (64), Expect = 0.75
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K F+ + +L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 27.1 bits (61), Expect = 2.1
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C C K F+ + L H K+H G +
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 4.2
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K ++ + L H K+H G +
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 5.1
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C C K F+ + L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 25.9 bits (58), Expect = 5.1
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C C K F+ + L H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
Score = 25.5 bits (57), Expect = 7.0
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C K F+ + ++ H K+H G K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEK 39
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.006
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F+ S+L H +H E
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.013
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F+ SHL H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.025
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ S+L H H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.048
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KCN C K F+ SHL H +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 30.5 bits (70), Expect = 0.11
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ S+L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 30.2 bits (69), Expect = 0.16
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F+ +L H +H G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F + +L +H +H G K
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 29.0 bits (66), Expect = 0.35
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F + +L +H +H G K
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 28.6 bits (65), Expect = 0.54
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F++ L H +H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG 37
Score = 27.9 bits (63), Expect = 0.89
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F+ L H +H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK 39
Score = 25.9 bits (58), Expect = 4.7
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F+ L H +H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 25.5 bits (57), Expect = 6.7
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F++ L H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 6.7
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F++ L H +H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 25.5 bits (57), Expect = 6.7
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K ++ L H +H G +
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.007
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K YKCN C K F+ S+L H ++H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KCN C K F+ SHL H +VH G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 32.1 bits (74), Expect = 0.026
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ S+L H + H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 32.1 bits (74), Expect = 0.034
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KCN C K F+ SHL H +VH G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37
Score = 30.2 bits (69), Expect = 0.15
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC+ C K F+ +L H +VH G K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ S+L H ++H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 29.8 bits (68), Expect = 0.22
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKCN C K F + +L +H ++H G K
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 29.0 bits (66), Expect = 0.37
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC+ C K F + +L +H +VH G K
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 28.6 bits (65), Expect = 0.47
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC+ C K F++ L H ++H G
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG 37
Score = 27.9 bits (63), Expect = 1.1
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F+ L H ++H G K
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGK 39
Score = 26.3 bits (59), Expect = 3.9
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F+ L H ++H G +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 25.9 bits (58), Expect = 5.0
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
YKC+ C K ++ L H ++H G +
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 25.2 bits (56), Expect = 9.2
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F++ L H ++H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 25.2 bits (56), Expect = 9.2
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F++ L H ++H G K + +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 34.0 bits (79), Expect = 0.007
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K +KC C K F +L H+++H E
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.008
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC C K F HL H+++H G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 32.9 bits (76), Expect = 0.015
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F +L H++ H G K +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.032
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KC C K F HL H+++H G
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37
Score = 30.5 bits (70), Expect = 0.11
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + +KC C K F +L H+++H G K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 30.5 bits (70), Expect = 0.11
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F +L H+++H G K
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.15
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+KC C K F + +L H+++H G K
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 29.8 bits (68), Expect = 0.20
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+KC C K F + +L H+++H G K
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 29.4 bits (67), Expect = 0.24
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + +KC C K F + L H+++H G
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG 37
Score = 28.2 bits (64), Expect = 0.84
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K F L H+++H G K
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEK 39
Score = 26.7 bits (60), Expect = 3.0
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC C K F L H+++H G +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 26.3 bits (59), Expect = 3.4
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F + L H+++H G K + +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 26.3 bits (59), Expect = 3.4
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F + L H+++H G K + +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.6
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+KC C K + L H+++H G +
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 34.0 bits (79), Expect = 0.007
Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G Y+C C K FS K L H K H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 31.3 bits (72), Expect = 0.059
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C C K F RK L H K H G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 30.9 bits (71), Expect = 0.087
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C C K F RK L H K H G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 30.2 bits (69), Expect = 0.12
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G Y+C C K FSRK +L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG 37
Score = 29.0 bits (66), Expect = 0.38
Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G +C C K FS K L H K H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 29.0 bits (66), Expect = 0.38
Identities = 12/41 (29%), Positives = 13/41 (31%), Gaps = 2/41 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
G +C C K FS K L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.0 bits (66), Expect = 0.39
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G Y+C C K FS K L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 28.6 bits (65), Expect = 0.57
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
+C C K FS K L H + H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSG 37
Score = 28.6 bits (65), Expect = 0.57
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG 455
+C C K FS K L H + H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSG 37
Score = 26.7 bits (60), Expect = 2.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
+C C K FSRK +L H K H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 26.7 bits (60), Expect = 2.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
+C C K FSRK +L H K H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 25.9 bits (58), Expect = 5.3
Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G +C C K FS K L H K H G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQS 39
Score = 25.5 bits (57), Expect = 5.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQG 563
+C C K FS K L H K H G
Sbjct: 14 ECCECGKVFSRKDQLVSHQKTHSG 37
Score = 25.5 bits (57), Expect = 5.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y+C C K +S K L H K H G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSG 37
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 33.7 bits (77), Expect = 0.007
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G +KC+ C + F+ ++YL +H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 31.8 bits (72), Expect = 0.040
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQG 158
+KC C + F+ + YL +H + H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 31.0 bits (70), Expect = 0.074
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQG 482
+KC+ C + F ++ L +H + H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 31.0 bits (70), Expect = 0.088
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQG 320
+KC C + F ++ L +H + H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 30.6 bits (69), Expect = 0.12
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQG 347
G KC C + F+ ++YL +H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 30.2 bits (68), Expect = 0.15
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
+KC C + F+++ L +H + H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 29.8 bits (67), Expect = 0.18
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQG 185
G KC C + F+ ++YL +H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 29.1 bits (65), Expect = 0.33
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
KC+ C + F+ +++L +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 29.1 bits (65), Expect = 0.33
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG 455
KC+ C + F+ +++L +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 29.1 bits (65), Expect = 0.42
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQG 239
+KC C + ++ + YL +H + H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 29.1 bits (65), Expect = 0.42
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQG 401
+KC C + ++ + YL +H + H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 27.5 bits (61), Expect = 1.2
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
+KC C + ++ ++ L +H + H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 26.7 bits (59), Expect = 2.1
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQG 563
KC C + F+ ++ L +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 26.7 bits (59), Expect = 2.2
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQG 509
G KC C + F+ + L +H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 26.7 bits (59), Expect = 2.3
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLG 266
KC C + F+++ L +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 26.7 bits (59), Expect = 2.3
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLG 428
KC C + F+++ L +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 25.6 bits (56), Expect = 6.1
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 351 KCDLCSKEFSCKRYVTEHMKLH 372
KC C + F+ + Y+ +H + H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTH 35
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.7 bits (78), Expect = 0.007
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K +KC C K F+ S L H ++H E
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.008
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC C K F+ S L H +VH G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 33.3 bits (77), Expect = 0.011
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F+ S L H + H G K +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.032
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KC C K F+ S L H +VH G
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37
Score = 30.2 bits (69), Expect = 0.13
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + +KC+ C K F+ L H +VH G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F+ S L H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 29.8 bits (68), Expect = 0.21
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G +KC+ C K F + L H +VH G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 29.4 bits (67), Expect = 0.25
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + +KC+ C K F++ +L H ++H G
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG 37
Score = 29.4 bits (67), Expect = 0.25
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G +KC C K F + L H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 27.5 bits (62), Expect = 1.2
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F+ L H ++H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEK 39
Score = 26.7 bits (60), Expect = 2.5
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K KC+ C K F+ L H ++H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 5.3
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K KC C K F++ +L H ++H G K + +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 5.3
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K KC C K F++ +L H ++H G K + +
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 25.6 bits (57), Expect = 6.4
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+KC+ C K ++ L H ++H G +
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 33.6 bits (78), Expect = 0.007
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K ++C C K FS S L H ++H E
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.031
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37
Score = 32.1 bits (74), Expect = 0.031
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 455
G K +C C K FS S L H ++H G
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37
Score = 31.3 bits (72), Expect = 0.059
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
G K +C C K FS S L H + H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.061
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + ++C C K FS L H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 30.9 bits (71), Expect = 0.072
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K FS S L H ++H G K
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 29.4 bits (67), Expect = 0.31
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
++C C K F L H ++H G K
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEK 39
Score = 29.0 bits (66), Expect = 0.35
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + ++C C K FS +L H ++H G
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG 37
Score = 28.6 bits (65), Expect = 0.45
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
++C C K F L H ++H G K
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEK 39
Score = 28.6 bits (65), Expect = 0.61
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K FS L H ++H G K
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 26.7 bits (60), Expect = 2.7
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K +C C K FS L H ++H G +
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 5.4
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
++C C K +S L H ++H G +
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 25.5 bits (57), Expect = 6.5
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C K FS + H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 25.5 bits (57), Expect = 6.6
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K +C C K FS +L H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
Score = 25.5 bits (57), Expect = 6.6
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K +C C K FS +L H ++H G K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEK 39
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.7 bits (78), Expect = 0.008
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCD 218
G K YKC C K + + L H ++H E
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 32.9 bits (76), Expect = 0.017
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KCV C K + + L H + H G K +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 32.5 bits (75), Expect = 0.022
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC C K + + L H +VH G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 31.3 bits (72), Expect = 0.050
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCD 299
G K KC C K + + L H +VH G
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 31.0 bits (71), Expect = 0.071
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KCV C K + + L H ++H G K
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.085
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + YKC C K + + L H +VH G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 31.0 bits (71), Expect = 0.089
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + YKC C K + R+ L H ++H G
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG 37
Score = 30.6 bits (70), Expect = 0.10
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
YKC C K + R+ +L H +VH G K
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 30.6 bits (70), Expect = 0.11
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
YKC C K + R+ +L H ++H G K
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 29.0 bits (66), Expect = 0.38
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC C K + + L H ++H G K
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 27.5 bits (62), Expect = 1.4
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
G K KC C K + + L H ++H G +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 26.7 bits (60), Expect = 2.5
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K KCV C K + R+ L H ++H G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 26.7 bits (60), Expect = 2.5
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K KCV C K + R+ L H ++H G K
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEK 39
Score = 26.3 bits (59), Expect = 3.5
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCD 137
YKC C K Y + L H ++H G +
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.008
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y C+ C K F + L H ++H E
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.014
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K C+ C K F + L H ++H G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.022
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C C K F + L H + H G K +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 31.3 bits (72), Expect = 0.049
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K C+ C K F + L H ++H G
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37
Score = 31.3 bits (72), Expect = 0.060
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y CD C K F L H ++H G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.14
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y C+ C K F L +H ++H G K
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.16
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C K F + L H ++H G K
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 30.2 bits (69), Expect = 0.16
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y CD C K F L +H ++H G K
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 29.8 bits (68), Expect = 0.19
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG 37
Score = 28.6 bits (65), Expect = 0.52
Identities = 12/38 (31%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K CD C K F L H ++H G K
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 27.1 bits (61), Expect = 1.9
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y CD C K + L H ++H G +
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 1.9
Identities = 11/41 (26%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K CD C K F L H ++H G +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 25.9 bits (58), Expect = 4.3
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K CD C K F + H ++H G K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEK 39
Score = 25.9 bits (58), Expect = 4.6
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 272
G K C C K F L H ++H G K + +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 25.9 bits (58), Expect = 4.6
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCN 434
G K C C K F L H ++H G K + +
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 33.6 bits (76), Expect = 0.009
Identities = 14/30 (46%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 133 RYKCDLCSKEFSCKRYLTEHMKVH-QGMKN 161
+KC+ C K FSC +YLT+H ++H +G+K+
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIHTRGVKS 41
Score = 29.8 bits (66), Expect = 0.21
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 351 KCDLCSKEFSCKRYVTEHMKLH 372
KC+ C K FSC +Y+T+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 29.4 bits (65), Expect = 0.31
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLH 210
+KCN C K FS YLT+H ++H
Sbjct: 13 FKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.3 bits (62), Expect = 0.77
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVH 291
KCN C K FSC +L +H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 28.3 bits (62), Expect = 0.77
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVH 453
KCN C K FSC +L +H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 27.1 bits (59), Expect = 1.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLH 534
KC+ C K FSC + +T+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
Score = 26.3 bits (57), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 565 RYKCDLCTKEFSRKGRLTEHMKLH 588
+KC+ C K FS LT+H ++H
Sbjct: 12 CFKCNKCEKTFSCSKYLTQHERIH 35
Score = 25.9 bits (56), Expect = 5.5
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVH-QGMKN 323
+KC+ C K F + LT+H ++H +G+K+
Sbjct: 13 FKCNKCEKTFSCSKYLTQHERIHTRGVKS 41
Score = 25.6 bits (55), Expect = 7.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLH 345
KC C K FS YLT+H ++H
Sbjct: 14 KCNKCEKTFSCSKYLTQHERIH 35
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 33.6 bits (78), Expect = 0.009
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G + C+ C K F+ K+ L H K+H E
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 32.1 bits (74), Expect = 0.028
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCN 461
G C+ C K F+ K++L H ++H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 31.7 bits (73), Expect = 0.037
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G C C K F+ K+ L H K H G + +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 30.9 bits (71), Expect = 0.090
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+ C+ C K F K NL H K+H G +
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 30.5 bits (70), Expect = 0.094
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G C+ C K F+ K++L H ++H G
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37
Score = 30.5 bits (70), Expect = 0.11
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+ C C K F K NL H K+H G +
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + C C K F+ K L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 29.8 bits (68), Expect = 0.20
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + C C K F+ K L H K+H G
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG 37
Score = 28.6 bits (65), Expect = 0.45
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G C C K F+ K+ L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 27.8 bits (63), Expect = 1.1
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G C C K F+ K +L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 27.5 bits (62), Expect = 1.5
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G C C K F+ K L H K+H G R
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 26.3 bits (59), Expect = 3.1
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
+ C C K +++K L H K+H G R
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 25.5 bits (57), Expect = 6.1
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G C C K F+ K L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
Score = 25.5 bits (57), Expect = 6.1
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G C C K F+ K L H K+H G +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGER 39
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 33.3 bits (77), Expect = 0.011
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K KC C K F KS L H + H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.4 bits (72), Expect = 0.052
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F KS L H + H K +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 31.0 bits (71), Expect = 0.073
Identities = 10/27 (37%), Positives = 11/27 (40%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
KC C K F K L H + H K
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 31.0 bits (71), Expect = 0.077
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
KC C K F KS L H + H +
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 30.6 bits (70), Expect = 0.11
Identities = 10/27 (37%), Positives = 11/27 (40%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
KC C K F K L H + H K
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 29.8 bits (68), Expect = 0.17
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
KC C K F KS L H + H
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVD 37
Score = 29.4 bits (67), Expect = 0.27
Identities = 10/27 (37%), Positives = 11/27 (40%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
KC C K F K L H + H K
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 29.4 bits (67), Expect = 0.31
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
KC C K F K +L H + H+
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVD 37
Score = 28.7 bits (65), Expect = 0.51
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F KS L H + H K
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 27.1 bits (61), Expect = 2.1
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
KC C K + +K L H + H +
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 26.4 bits (59), Expect = 4.0
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIK 511
KC C K F K L H + H K
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 26.0 bits (58), Expect = 4.1
Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
KC C K F K L H + H +
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 26.0 bits (58), Expect = 5.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
KC C K F K +L H + H+ K
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDK 39
Score = 26.0 bits (58), Expect = 5.2
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
KC C K F K +L H + H+ K
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDK 39
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 33.3 bits (77), Expect = 0.012
Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G K Y C C K F S L +H ++H E
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 32.2 bits (74), Expect = 0.030
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C C K F S L +H + H G K +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 31.8 bits (73), Expect = 0.036
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K C C K F S L +H +VH G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 30.6 bits (70), Expect = 0.099
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K C C K F S L +H +VH G
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37
Score = 30.2 bits (69), Expect = 0.13
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + Y C C K F L +H +VH G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 29.1 bits (66), Expect = 0.31
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C K F S L +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 29.1 bits (66), Expect = 0.40
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C C K F L KH +VH G K
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 29.1 bits (66), Expect = 0.41
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y C C K F L KH ++H G K
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 27.9 bits (63), Expect = 0.81
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + Y C C K F L +H ++H G
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG 37
Score = 27.1 bits (61), Expect = 1.7
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K C C K F L +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
Score = 26.8 bits (60), Expect = 2.3
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y C C K + + L +H ++H G +
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 26.4 bits (59), Expect = 3.1
Identities = 10/41 (24%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
G K C C K F L +H ++H G +
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 25.2 bits (56), Expect = 8.2
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K C C K F + +H ++H G K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEK 39
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 32.9 bits (76), Expect = 0.014
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCD 218
G K +KC C K F + S H + H E
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 32.5 bits (75), Expect = 0.020
Identities = 11/42 (26%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K KC C K F S H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 32.1 bits (74), Expect = 0.030
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K KC C K F + S H + H G K +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 31.8 bits (73), Expect = 0.038
Identities = 11/35 (31%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
G K KC C K F S H + H G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37
Score = 30.6 bits (70), Expect = 0.11
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + +KC+ C K F H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 30.2 bits (69), Expect = 0.13
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+KC+ C K FY H + H G K
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 30.2 bits (69), Expect = 0.14
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+KC C K FY H + H G K
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 29.4 bits (67), Expect = 0.27
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K KC C K F + S H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 28.7 bits (65), Expect = 0.53
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + +KC+ C K F + H + H G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG 37
Score = 27.1 bits (61), Expect = 1.7
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K KC+ C K F T H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 26.0 bits (58), Expect = 4.5
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 530 HMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
G K KC+ C K F T H + H G +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 25.2 bits (56), Expect = 7.8
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K KC C K F + H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 25.2 bits (56), Expect = 7.8
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K KC C K F + H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
Score = 25.2 bits (56), Expect = 8.8
Identities = 11/37 (29%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K KC+ C K F H + H G K
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEK 39
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 32.9 bits (76), Expect = 0.014
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKC 217
G K Y+C C K F +L +H ++H E +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 31.7 bits (73), Expect = 0.043
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
+C C K F HL +H +VH G +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 31.0 bits (71), Expect = 0.073
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
+C C K F HL +H +VH G
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTG 37
Score = 30.2 bits (69), Expect = 0.15
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C C K F + +L +H ++H G +
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 29.8 bits (68), Expect = 0.18
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C C K F + +L +H +VH G +
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 29.8 bits (68), Expect = 0.20
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
Y+C C K F +L +H +VH G +
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 29.4 bits (67), Expect = 0.24
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K +C C K F +L +H + H G + +
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 29.4 bits (67), Expect = 0.28
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
Y+C C K F + G L +H ++H G
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTG 37
Score = 27.9 bits (63), Expect = 1.0
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C K F +L +H ++H G +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 26.0 bits (58), Expect = 4.9
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K + L +H ++H G R
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 25.6 bits (57), Expect = 6.3
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C K F L +H ++H G +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 25.2 bits (56), Expect = 8.0
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
+C C K F L +H ++H G R
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 25.2 bits (56), Expect = 8.3
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
+C C K F + L +H ++H G +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGER 39
Score = 25.2 bits (56), Expect = 8.3
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
+C C K F + L +H ++H G +
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGER 39
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 32.9 bits (76), Expect = 0.017
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G K ++C C FS L +H++ H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 31.8 bits (73), Expect = 0.039
Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + ++C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 31.4 bits (72), Expect = 0.052
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
++C C F +L KH++ H+
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 31.4 bits (72), Expect = 0.052
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K +C C FS CSL +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 30.6 bits (70), Expect = 0.087
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G K +C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 30.6 bits (70), Expect = 0.087
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 455
G K +C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 30.2 bits (69), Expect = 0.13
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
++C C F +L KH++ H+
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 29.9 bits (68), Expect = 0.17
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + ++C C FS L +H++ H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 28.3 bits (64), Expect = 0.67
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K +C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 27.9 bits (63), Expect = 1.0
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK 187
G K +C C FS L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 27.5 bits (62), Expect = 1.4
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
++C C +S+ +L +H++ H+
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHER 37
Score = 26.8 bits (60), Expect = 2.3
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K +C C FS S+ +H++ H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 26.4 bits (59), Expect = 3.5
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQG 563
G K +C C FS +L +H++ H+
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 25.2 bits (56), Expect = 9.8
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
+C C FS L +H++ H
Sbjct: 14 QCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 25.2 bits (56), Expect = 9.8
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
+C C FS L +H++ H
Sbjct: 14 QCKECGMNFSWSCSLFKHLRSHERTD 39
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 32.5 bits (75), Expect = 0.018
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 181 KRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
G Y+C+ C K F+ K L H + H E
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 30.6 bits (70), Expect = 0.091
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C+ C K F RK L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGES 37
Score = 30.2 bits (69), Expect = 0.13
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C C K F RK L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGES 37
Score = 29.4 bits (67), Expect = 0.25
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
Y+C C K F+RK +L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAG 35
Score = 29.0 bits (66), Expect = 0.34
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
Y+C C K F+ K L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGES 37
Score = 29.0 bits (66), Expect = 0.37
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
+C+ C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAG 35
Score = 29.0 bits (66), Expect = 0.37
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG 455
+C+ C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAG 35
Score = 28.6 bits (65), Expect = 0.43
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKC 190
+C C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 27.1 bits (61), Expect = 1.5
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK 349
+C C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
Score = 26.3 bits (59), Expect = 2.8
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
+C C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 25.9 bits (58), Expect = 3.9
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKC 136
Y+C C K ++ K L H + H G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 25.9 bits (58), Expect = 4.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
+C C K F+RK +L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
Score = 25.9 bits (58), Expect = 4.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
+C C K F+RK +L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
Score = 25.6 bits (57), Expect = 6.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIK 511
+C C K F+ K L H + H G
Sbjct: 12 ECSECGKAFNRKDQLISHQRTHAGES 37
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 32.6 bits (75), Expect = 0.018
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G K + C+ C K F S L H ++H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 31.4 bits (72), Expect = 0.055
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
G + + CD C K F L H +VH G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 31.4 bits (72), Expect = 0.059
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 287 HMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G ++ CD C K F L H +VH G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 31.4 bits (72), Expect = 0.059
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 260 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 293
G K + C+ C K F S L+ H +VH G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 31.4 bits (72), Expect = 0.059
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 422 HMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG 455
G K + C+ C K F S L+ H +VH G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 30.3 bits (69), Expect = 0.12
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
G + + CD C K F L H ++H+G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 30.3 bits (69), Expect = 0.14
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G ++ C+ C K F L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 30.3 bits (69), Expect = 0.16
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 314 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK 349
G K + C C K F S L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 29.1 bits (66), Expect = 0.36
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 476 HMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
G K CD C K F +L H ++H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 28.7 bits (65), Expect = 0.43
Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Query: 152 HMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK 187
G K + C C K F S L H + H G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 27.9 bits (63), Expect = 1.1
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQG 563
G K + CD C K F L H ++H G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG 37
Score = 27.2 bits (61), Expect = 1.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
+ CD C K + Y L H ++H G
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMG 37
Score = 26.8 bits (60), Expect = 2.8
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 503 HMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
G K CD C K F ++ H ++H+G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 26.0 bits (58), Expect = 4.6
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
G K + C C K F L H ++H+G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
Score = 26.0 bits (58), Expect = 4.6
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 395 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 430
G K + C C K F L H ++H+G K
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEK 39
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 32.5 bits (75), Expect = 0.020
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLH 210
Y+C C K F K LT H ++H
Sbjct: 11 YECQECGKSFRQKGSLTLHERIH 33
Score = 32.5 bits (75), Expect = 0.021
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y+C C K F +K +LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 31.8 bits (73), Expect = 0.039
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y+C C K F +K +LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 31.0 bits (71), Expect = 0.071
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
Y+C C K F +KG LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 29.8 bits (68), Expect = 0.15
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
Y+C C K F K LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 29.5 bits (67), Expect = 0.22
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
+C C K F K L H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTG 35
Score = 29.5 bits (67), Expect = 0.22
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG 455
+C C K F K L H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTG 35
Score = 28.3 bits (64), Expect = 0.70
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK 349
+C C K F K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 27.2 bits (61), Expect = 1.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIK 511
+C C K F K SLT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 26.8 bits (60), Expect = 2.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y+C C K + K +LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTG 35
Score = 26.4 bits (59), Expect = 2.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK 187
+C C K F K LT H + H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 26.4 bits (59), Expect = 3.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
+C C K F +K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 26.4 bits (59), Expect = 3.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
+C C K F +K LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 26.4 bits (59), Expect = 3.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQG 563
+C C K F K +LT H ++H G
Sbjct: 12 ECQECGKSFRQKGSLTLHERIHTG 35
Score = 24.8 bits (55), Expect = 9.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK 241
Y+C C K + K LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 24.8 bits (55), Expect = 9.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK 403
Y+C C K + K LT H ++H G
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSG 37
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 32.3 bits (74), Expect = 0.028
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
C C + FS + L +H ++H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 32.3 bits (74), Expect = 0.028
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG 455
C C + FS + L +H ++H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 31.5 bits (72), Expect = 0.043
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQG 158
Y C C + FS L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 31.5 bits (72), Expect = 0.046
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 183 HQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G K Y C C + FS + L +H K+H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 30.8 bits (70), Expect = 0.086
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQG 482
Y C C + F L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 30.4 bits (69), Expect = 0.11
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQG 320
Y C C + F L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 30.0 bits (68), Expect = 0.19
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
Y C C + FS RL +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 28.4 bits (64), Expect = 0.53
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQG 347
C C + FS + L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 28.1 bits (63), Expect = 0.73
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y C C + +S + L +H K+H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 27.3 bits (61), Expect = 1.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQG 185
C C + FS + L +H K H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 27.3 bits (61), Expect = 1.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLG 266
C C + FS RL +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 27.3 bits (61), Expect = 1.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLG 428
C C + FS RL +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 26.5 bits (59), Expect = 2.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQG 563
C C + FS + L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 26.1 bits (58), Expect = 3.3
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQG 509
C C + FS L +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
Score = 25.4 bits (56), Expect = 7.7
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLG 536
C C + FS + +H K+H
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTV 35
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 36.3 bits (83), Expect = 0.030
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 180 MKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEI 213
Y CN+C+ FS+ S L+EH++
Sbjct: 109 TPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRD 142
Score = 35.9 bits (82), Expect = 0.037
Identities = 10/54 (18%), Positives = 19/54 (35%)
Query: 307 RKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFS 360
K + C +C+ FS+ S L+EH++ L + +
Sbjct: 101 SDPQSMKVTPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMIN 154
Score = 35.2 bits (80), Expect = 0.069
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 153 MKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSS 199
+ C +C+ FS+ S L+EH++ L + ++
Sbjct: 109 TPIVNPSSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINN 155
Score = 33.2 bits (75), Expect = 0.29
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSR 253
Y C++C +S L+EHL+ +L + +
Sbjct: 117 YVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINN 155
Score = 33.2 bits (75), Expect = 0.29
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSR 415
Y C++C +S L+EHL+ +L + +
Sbjct: 117 YVCNVCNARFSTMSALSEHLRSDHRDDASTLLATPMINN 155
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 31.9 bits (73), Expect = 0.031
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
G Y C C K F+ + L H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 31.9 bits (73), Expect = 0.037
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C C K F ++ +L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 31.9 bits (73), Expect = 0.037
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
Y C C K F ++ +L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 30.7 bits (70), Expect = 0.074
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
Y C C K F+++G L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 29.2 bits (66), Expect = 0.34
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
Y C C K F+ + L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 28.8 bits (65), Expect = 0.37
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 28.8 bits (65), Expect = 0.37
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG 455
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 28.0 bits (63), Expect = 0.85
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIK 511
C C K F+ + SL H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 27.6 bits (62), Expect = 0.96
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK 349
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 26.9 bits (60), Expect = 1.8
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y C C K ++ + +L H +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 26.5 bits (59), Expect = 2.7
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQG 563
C C K F+ + +L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 26.5 bits (59), Expect = 2.7
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK 187
C C K F+ + L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 25.7 bits (57), Expect = 5.6
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK 268
C C K F+++ L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 25.7 bits (57), Expect = 5.6
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK 430
C C K F+++ L H +
Sbjct: 13 LCGQCGKSFTQRGSLAVHQRSCSQSG 38
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 31.5 bits (72), Expect = 0.045
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 4/44 (9%)
Query: 449 HMQVHQGIT-YKCN--LCSKEFYRKQNLTKHMKLHQGIKK-KCD 488
G + C C F R L++H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 31.1 bits (71), Expect = 0.061
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 557 HMKLHQGIR-YKCD--LCTKEFSRKGRLTEHMKLHLGI 591
G + + C C FSR L+ H + H G+
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGV 40
Score = 30.7 bits (70), Expect = 0.085
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 287 HMQVHQGIT-YKCD--LCSKEFYRKQNLTKHMKVHQGMK 322
G + C C F R L++H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 30.0 bits (68), Expect = 0.19
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 4/44 (9%)
Query: 152 HMKVHQGMK-NKC--VLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
G K C C FS L+ H + H G+K +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 29.2 bits (66), Expect = 0.35
Identities = 9/44 (20%), Positives = 12/44 (27%), Gaps = 4/44 (9%)
Query: 179 HMKRHQGIK-YKCN--LCSKEFSSKSYLTEHMKLHQ-EITYKCD 218
G K + C C FS L+ H + H
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 28.8 bits (65), Expect = 0.48
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 233 HLKLHQGIK-NKC--VLCSKEFSRKRRLTEHMKLHLGIK 268
G K C C FSR L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 28.8 bits (65), Expect = 0.48
Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 395 HLKLHQGIK-NKC--VLCSKEFSRKRRLTEHMKLHLGIK 430
G K C C FSR L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 28.0 bits (63), Expect = 0.89
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 125 HMKLHQGIR-YKCD--LCSKEFSCKRYLTEHMKVHQGMK 160
G + + C C FS L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 27.7 bits (62), Expect = 1.3
Identities = 10/44 (22%), Positives = 14/44 (31%), Gaps = 4/44 (9%)
Query: 530 HMKLHLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
G K C C FS L+ H + H G++
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 27.3 bits (61), Expect = 1.5
Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 314 HMKVHQGMK-NKC--VLCSKEFSSKSYLTEHMKLHQGIK 349
G K C C FS L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVK 41
Score = 27.3 bits (61), Expect = 1.6
Identities = 10/44 (22%), Positives = 13/44 (29%), Gaps = 4/44 (9%)
Query: 422 HMKLHLGIK-NKCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCN 461
G K C C FS L H + H G+ +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 27.3 bits (61), Expect = 1.7
Identities = 10/44 (22%), Positives = 12/44 (27%), Gaps = 4/44 (9%)
Query: 260 HMKLHLGIK-NKCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCD 299
G K C C FS L H + H G+
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 26.1 bits (58), Expect = 4.9
Identities = 11/44 (25%), Positives = 14/44 (31%), Gaps = 4/44 (9%)
Query: 476 HMKLHQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIKK-KCD 515
G K C C FS L+ H + H G+K
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 31.0 bits (71), Expect = 0.081
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Query: 152 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKR-HQGIK-YKCN 191
G K +C+ C K F + L H + H G K +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 30.6 bits (70), Expect = 0.100
Identities = 9/29 (31%), Positives = 11/29 (37%), Gaps = 1/29 (3%)
Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEH 206
G K Y+C C K F + L H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRH 31
Score = 29.8 bits (68), Expect = 0.20
Identities = 10/43 (23%), Positives = 13/43 (30%), Gaps = 3/43 (6%)
Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHM-QVHQGIT-YKCN 461
G K +C C K F + L H H G +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 28.3 bits (64), Expect = 0.76
Identities = 10/42 (23%), Positives = 12/42 (28%), Gaps = 3/42 (7%)
Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHM-QVHQGIT-YKC 298
G K +C C K F + L H H G
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 27.1 bits (61), Expect = 1.8
Identities = 11/38 (28%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 125 HMKLHQGIR-YKCDLCSKEFSCKRYLTEHM-KVHQGMK 160
G + Y+C C K F L H H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 26.0 bits (58), Expect = 4.4
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 314 HMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKL-HQGIK 349
G K +C+ C K F + L H + H G K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEK 40
Score = 26.0 bits (58), Expect = 4.7
Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 1/29 (3%)
Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEH 584
G + Y+C C K F + L H
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRH 31
Score = 25.6 bits (57), Expect = 5.8
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKL-HQGIK 484
Y+C C K F + +L +H + H G K
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEK 40
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 30.7 bits (69), Expect = 0.10
Identities = 11/34 (32%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCNLCS 464
C +C K F HL H H G Y S
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 30.7 bits (69), Expect = 0.12
Identities = 11/34 (32%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCDLCS 302
C +C K F HL H H G Y S
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 29.1 bits (65), Expect = 0.38
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 133 RYKCDLCSKEFSCKRYLTEHMKVHQGMK 160
+ C++C K F +L H H G K
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 29.1 bits (65), Expect = 0.40
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
C++C K F +L +H H G K
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 28.4 bits (63), Expect = 0.62
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCS 194
C +C K F +L H H G K Y S
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 28.0 bits (62), Expect = 0.89
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 187 KYKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLC 220
+ C +C K F +L H H E Y
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 27.6 bits (61), Expect = 1.5
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCT 572
C++C K F + L H H G + Y +
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 27.6 bits (61), Expect = 1.5
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCS 140
C++C K + + L H H G + Y S
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 27.2 bits (60), Expect = 2.0
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
C +C K F +L +H H G K
Sbjct: 13 VACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 26.4 bits (58), Expect = 3.2
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIK 511
C++C K F L H H G K
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 26.4 bits (58), Expect = 3.8
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 565 RYKCDLCTKEFSRKGRLTEHMKLHLG 590
+ C++C K F L H H G
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSG 37
Score = 25.7 bits (56), Expect = 7.2
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK 349
C +C K F +L H H G K
Sbjct: 14 ACEICGKIFRDVYHLNRHKLSHSGEK 39
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 29.5 bits (66), Expect = 0.19
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKKK 486
+ C C K F R +L+KH+ LH+ + ++
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 28.3 bits (63), Expect = 0.49
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMKNK 324
+ C C K F R +L+KH+ +H+ + +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 24.9 bits (54), Expect = 8.1
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 133 RYKCDLCSKEFSCKRYLTEHMKVHQGMKNK 162
++ C C K F +L++H+ +H+ + +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLGEE 31
Score = 24.9 bits (54), Expect = 9.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 565 RYKCDLCTKEFSRKGRLTEHMKLH 588
++ C C K F R L++H+ LH
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLH 25
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 29.5 bits (65), Expect = 0.27
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 457 TYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCD 488
Y C +C F RK ++ H++ H G K
Sbjct: 10 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 28.7 bits (63), Expect = 0.46
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQGMKNK 324
Y C +C F RK ++ H++ H G K
Sbjct: 10 PYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 39
Score = 27.6 bits (60), Expect = 1.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 566 YKCDLCTKEFSRKGRLTEHMKLHLG 590
Y C +C F RK R++ H++ H G
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 25.6 bits (55), Expect = 6.9
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQEITYKCD 218
Y C +C F K ++ H++ H K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKSG 41
Score = 25.6 bits (55), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLG 266
C +C F RK R++ H++ H G
Sbjct: 12 SCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 25.6 bits (55), Expect = 7.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLG 428
C +C F RK R++ H++ H G
Sbjct: 12 SCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 25.3 bits (54), Expect = 8.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMKNK 162
Y C +C F K ++ H++ H G K
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDGSVGK 39
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 28.6 bits (64), Expect = 0.44
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQ 319
+Y C C +EF Q L HM VH+
Sbjct: 6 SYTCSFCKREFRSAQALGGHMNVHR 30
Score = 28.6 bits (64), Expect = 0.56
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 457 TYKCNLCSKEFYRKQNLTKHMKLHQ 481
+Y C+ C +EF Q L HM +H+
Sbjct: 6 SYTCSFCKREFRSAQALGGHMNVHR 30
Score = 27.0 bits (60), Expect = 2.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 187 KYKCNLCSKEFSSKSYLTEHMKLHQE 212
Y C+ C +EF S L HM +H+
Sbjct: 6 SYTCSFCKREFRSAQALGGHMNVHRR 31
Score = 25.5 bits (56), Expect = 5.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQ 157
Y C C +EF + L HM VH+
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVHR 30
Score = 25.1 bits (55), Expect = 7.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQ 562
C C +EF + L HM +H+
Sbjct: 8 TCSFCKREFRSAQALGGHMNVHR 30
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.5 bits (73), Expect = 0.47
Identities = 74/599 (12%), Positives = 162/599 (27%), Gaps = 208/599 (34%)
Query: 61 RDCLEFFKSCPKVEVKSDHERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKH 120
+D L F+ + + + + + + L K+ I K
Sbjct: 19 KDILSVFED----AFVDNFDCKDV-----QDMPKSILSKEEIDHI----------IMSKD 59
Query: 121 TLTEHMKLHQGIRYKCD-LCSK-EFSCKRYLTEHMK-----VHQGMKNKCVLCSKEFSSK 173
+ G L SK E ++++ E ++ + +K + ++
Sbjct: 60 AV-------SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR--QPSMMTR 110
Query: 174 SYLTEHMKRHQG----IKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIY 229
Y+ + + + KY N+ + ++KL Q L E
Sbjct: 111 MYIEQRDRLYNDNQVFAKY--NVSRLQ--------PYLKLRQ--------ALLELRPAKN 152
Query: 230 LTEHLKLHQGIK--NKCVLCSKEFSRKRRLTEHMK-----LHLGIKNKCNLCSKEFSCKS 282
+ + G+ K + + + ++ M L+L CN
Sbjct: 153 VL----ID-GVLGSGKTWV-ALDVCLSYKVQCKMDFKIFWLNLK---NCN-------SPE 196
Query: 283 HLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEF-------SSK 335
+ E +Q L +Q N S +
Sbjct: 197 TVLEMLQ---------KLL----------------YQIDPNWTSRSDHSSNIKLRIHSIQ 231
Query: 336 SYLTEHMKLHQGIKNKC-----DLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKI 390
+ L +K C ++ + + L C KI
Sbjct: 232 AELRRLLKSKP--YENCLLVLLNVQNAK------AWNAFNL------SC---------KI 268
Query: 391 YLTEHLKLHQGIKNKCVLCS-KEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSH-LKE 448
LT + K V + +H + L +L K C+ L
Sbjct: 269 LLTT--------RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 449 HMQVHQGITYKCNLCSK---------EFYRKQNLTKHMKLHQGIKKKCD-LCSKEF---- 494
+V + ++ ++ + ++ N KL I+ + L E+
Sbjct: 321 --EVLTTNPRRLSIIAESIRDGLATWDNWKHVN---CDKLTTIIESSLNVLEPAEYRKMF 375
Query: 495 --------------STKCSL------TEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLH 534
+ ++ M + + K L K+ + +++ ++
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS-LVEKQ-PKESTISIPS-IY 432
Query: 535 LGIKNKCDLCSKEFSTKH-TLTEHMKLHQGIRYKCDLCTKE------FSRKGRLTEHMK 586
L +K K + H ++ +H + + + D +S G H+K
Sbjct: 433 LELKVKLE----NEYALHRSIVDHYNIPKT--FDSDDLIPPYLDQYFYSHIGH---HLK 482
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 27.6 bits (61), Expect = 0.87
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
+ C C K F R +LT H+ LH+ K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 27.6 bits (61), Expect = 0.94
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
+ C C K F R +LT H+ +H+ K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 27.7 bits (62), Expect = 0.91
Identities = 8/28 (28%), Positives = 19/28 (67%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQGMK 322
++ C++C++ F R+++L +H + H K
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 26.5 bits (59), Expect = 1.9
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 457 TYKCNLCSKEFYRKQNLTKHMKLHQGIK 484
++ C +C++ F R+++L +H + H K
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 29.4 bits (65), Expect = 1.0
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 106 GYKCDLCSKEYSY-----KHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEH-MKVHQGM 159
GY+C C+ + H +EH + Y C C+ L+EH +K H G
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE 77
Query: 160 KN 161
+N
Sbjct: 78 EN 79
Score = 28.2 bits (62), Expect = 2.9
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 270 KCNLCSKEFSCKSHLKEHMQ-----VHQGITYKCDLCSKEFYRKQNLTKH-MKVHQGMKN 323
+C C+ + + H+ V +Y C C+ R L++H +K H G +N
Sbjct: 20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEEN 79
Score = 28.2 bits (62), Expect = 2.9
Identities = 15/72 (20%), Positives = 24/72 (33%), Gaps = 6/72 (8%)
Query: 444 SHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKL-HQGIKK----KCDLCSKEFSTKC 498
H Y+C C+ + T H+ H + C C+
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 499 SLTEH-MKLHQG 509
+L+EH +K H G
Sbjct: 65 ALSEHNLKYHPG 76
Score = 27.8 bits (61), Expect = 4.2
Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 6/75 (8%)
Query: 282 SHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMK-----VHQGMKNKCVLCSKEFSSKS 336
H Y+C C+ + T H+ V CV C+
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 337 YLTEH-MKLHQGIKN 350
L+EH +K H G +N
Sbjct: 65 ALSEHNLKYHPGEEN 79
Score = 27.0 bits (59), Expect = 5.9
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Query: 432 KCNLCSKEFSCKSHLKEHMQ-----VHQGITYKCNLCSKEFYRKQNLTKH-MKLHQG 482
+C C+ + + H+ V +Y C C+ R L++H +K H G
Sbjct: 20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Score = 27.0 bits (59), Expect = 6.5
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 6/57 (10%)
Query: 540 KCDLCSKEFS-----TKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEH-MKLHLG 590
+C C+ + T H +EH + Y C C R L+EH +K H G
Sbjct: 20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Score = 26.7 bits (58), Expect = 8.1
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Query: 133 RYKCDLCSKEFSCKRYLTEHMK-----VHQGMKNKCVLCSKEFSSKSYLTEHMKRH 183
Y+C C+ + T H+ V CV C+ L+EH ++
Sbjct: 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY 73
Score = 26.7 bits (58), Expect = 8.9
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 170 FSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMK-----LHQEITYKCDLCLKEY 224
+ + K+ +G Y+C C+ + + T H+ + +Y C C
Sbjct: 2 AHHHHHHNQQNKKVEG-GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 60
Query: 225 SNKIYLTEH-LKLHQGIKN 242
L+EH LK H G +N
Sbjct: 61 KRYDALSEHNLKYHPGEEN 79
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 27.2 bits (61), Expect = 1.2
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 458 YKCN--LCSKEFYRKQNLTKHMKLHQGIK 484
+ C C K F R L +H + H G K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 27.2 bits (61), Expect = 1.2
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 296 YKCD--LCSKEFYRKQNLTKHMKVHQGMK 322
+ C C K F R L +H + H G K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 24.9 bits (55), Expect = 7.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIK 268
C K F+R L H + H G K
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
Score = 24.9 bits (55), Expect = 7.6
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIK 430
C K F+R L H + H G K
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
Score = 24.9 bits (55), Expect = 8.7
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 566 YKCD--LCTKEFSRKGRLTEHMKLHLG 590
+ C C K F+R L H + H G
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTG 29
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 28.7 bits (63), Expect = 1.7
Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 287 HMQVHQGITYKCDLCSKEFYRK-QNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMK 343
++++ + C C + + L KHM+ + C C K+ S + + H+
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 27.5 bits (60), Expect = 4.2
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 446 LKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMK 478
LK+HM+ + + C+ C K+ + H+
Sbjct: 51 LKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 27.5 bits (60), Expect = 4.8
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 284 LKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMK 316
LK+HM+ + + C C K+ + H+
Sbjct: 51 LKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 27.1 bits (59), Expect = 4.9
Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 152 HMKVHQGMKNKCVLCSK-EFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMK 208
++++ C C + L +HM+ + + C+ C K+ S + + H+
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 26.8 bits (58), Expect = 8.5
Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 449 HMQVHQGITYKCNLCSKEFYRK-QNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMK 505
++++ + C C + + L KHM+ + C C K+ + + H+
Sbjct: 26 YLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVM 83
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 26.7 bits (58), Expect = 2.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 292 QGITYKCDLCSKEFYRKQNLTKHMKVHQGMK 322
G YKC CS K NL H++ H G K
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 25.2 bits (54), Expect = 7.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 454 QGITYKCNLCSKEFYRKQNLTKHMKLHQGIK 484
G YKC CS K NL H++ H G K
Sbjct: 6 SGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 27.3 bits (60), Expect = 3.0
Identities = 15/53 (28%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMK 322
C C E S LKEH T C C + K L H +V
Sbjct: 19 VCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEVCGREG 69
Score = 26.9 bits (59), Expect = 4.0
Identities = 14/55 (25%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKK 486
C C E S LKEH T C C + K L H ++
Sbjct: 19 VCQHCDLELS-ILKLKEHEDYCGARTELCGNCGRNVLVKD-LKTHPEVCGREGSG 71
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 26.4 bits (57), Expect = 3.2
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQG 320
T +C C K F L +H +H G
Sbjct: 12 TSECQECGKIFRHSSLLIEHQALHAG 37
Score = 26.0 bits (56), Expect = 4.8
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 457 TYKCNLCSKEFYRKQNLTKHMKLHQG 482
T +C C K F L +H LH G
Sbjct: 12 TSECQECGKIFRHSSLLIEHQALHAG 37
Score = 25.6 bits (55), Expect = 7.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 269 NKCNLCSKEFSCKSHLKEHMQVHQG 293
++C C K F S L EH +H G
Sbjct: 13 SECQECGKIFRHSSLLIEHQALHAG 37
Score = 25.6 bits (55), Expect = 7.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 431 NKCNLCSKEFSCKSHLKEHMQVHQG 455
++C C K F S L EH +H G
Sbjct: 13 SECQECGKIFRHSSLLIEHQALHAG 37
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 25.9 bits (56), Expect = 3.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
Y C +C K +S KH + H ++H G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.1 bits (54), Expect = 7.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 541 CDLCSKEFSTKHTLTEHMKLHQG 563
C +C K FS KH + H ++H G
Sbjct: 6 CSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.1 bits (54), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQG 158
Y C +C K FS K + H +VH G
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 25.9 bits (56), Expect = 3.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQ 319
YKC LC + F K L++H +VH+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 25.5 bits (55), Expect = 4.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ 211
YKC LC + F KS L+ H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 25.1 bits (54), Expect = 5.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQ 481
YKC LC + F K L++H ++H+
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 28.6 bits (63), Expect = 4.6
Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 168 KEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
K S S T H +G K + + + L + L
Sbjct: 188 KRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 25.5 bits (55), Expect = 6.8
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQGMKNK 324
+++C C + F++ +L +H +H G KN
Sbjct: 12 SHQCRECGEIFFQYVSLIEHQVLHMGQKNS 41
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 25.6 bits (55), Expect = 6.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 129 HQGIRYKCDLCSKEFSCKRYLTEHMKVHQG 158
H RY+C C F+ +++L +H K H
Sbjct: 8 HTRKRYECSKCQATFNLRKHLIQHQKTHAA 37
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 25.2 bits (54), Expect = 7.8
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG 131
+ C+ C+K + +KH+L H+++H
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTN 34
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 25.1 bits (54), Expect = 8.0
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
Y C C ++F L +H+++H G K
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTGEK 30
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.133 0.416
Gapped
Lambda K H
0.267 0.0505 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,538,124
Number of extensions: 497515
Number of successful extensions: 5841
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4355
Number of HSP's successfully gapped: 2515
Length of query: 591
Length of database: 6,701,793
Length adjustment: 99
Effective length of query: 492
Effective length of database: 3,937,614
Effective search space: 1937306088
Effective search space used: 1937306088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.4 bits)