BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8501
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q297K8|JAGN_DROPS Protein jagunal OS=Drosophila pseudoobscura pseudoobscura GN=jagn
PE=3 SV=1
Length = 197
Score = 237 bits (604), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 142/195 (72%), Gaps = 1/195 (0%)
Query: 1 MASRGM-YVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MA+RG V GTDG DF RQ++A YQ S+LNK+RLKY IFFH LLFFVMLAKL++DIL
Sbjct: 1 MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
DRLDIF+LEIEEL +P PL WEY+W SLL SFLGLS+ R N + M+KY+ I+ F +
Sbjct: 61 DRLDIFVLEIEELEVPSPLWWEYVWAGSLLTSFLGLSAARGNKVREMQKYMIAILVFAIL 120
Query: 120 PILYAVIYYFHDFWTYITLDPDEDIEDKEITMWQGYPYALLWYIFIVLALQVHTFSLYFS 179
P+LY YYF D W + T+D ++++ +I +W+GYPY + WY F + QVH F+LYF+
Sbjct: 121 PLLYCFAYYFSDVWEFATMDKSVELDETDIFIWRGYPYGVFWYAFCFVGFQVHGFTLYFA 180
Query: 180 NNLIQCWRLRAAIKK 194
NL++ W+ R A +K
Sbjct: 181 YNLVKVWKARTATRK 195
>sp|Q7K1V5|JAGN_DROME Protein jagunal OS=Drosophila melanogaster GN=jagn PE=1 SV=1
Length = 197
Score = 233 bits (593), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
Query: 1 MASRGM-YVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MA+RG V GTDG DF RQ++A YQ S+LNK+RLKY IFFH LLFFVMLAKL++DIL
Sbjct: 1 MATRGGPMVAGTDGNDFEFRQRVAGTYQISLLNKSRLKYCIFFHALLFFVMLAKLTSDIL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
D LDIF+LEIEEL +P PL WEY+W SLL SFLGLS+ R N + M+KY+ I+ F +
Sbjct: 61 DHLDIFVLEIEELEVPPPLWWEYVWAASLLTSFLGLSAARGNKVREMQKYMVAILLFAIL 120
Query: 120 PILYAVIYYFHDFWTYITLDPDEDIEDKEITMWQGYPYALLWYIFIVLALQVHTFSLYFS 179
P+ Y YYF D W + TLD ++++ +I +W+GYPY + WY F + QVH F+LYF+
Sbjct: 121 PLFYCFAYYFSDVWEFATLDKSVELDETDIFVWRGYPYGVFWYAFCFVGFQVHGFTLYFA 180
Query: 180 NNLIQCWRLRAAIKK 194
NL++ W+ R A +K
Sbjct: 181 YNLVKAWKARTATRK 195
>sp|Q9XUU9|JAGN_CAEEL Protein jagunal homolog OS=Caenorhabditis elegans GN=K05C4.2 PE=3
SV=1
Length = 189
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 30/206 (14%)
Query: 1 MASRGMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL- 59
M+SRG+ GTDGTDF +RQ++A HYQ S K+ LK+ H+L+ M K+ +++L
Sbjct: 1 MSSRGVRAAGTDGTDFQNRQRVAQHYQESAQYKSILKWFFVPHFLILVFMWLKVGSELLR 60
Query: 60 ----------DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKY 109
DRLD +P WEY+WCFS + L + S ++N + +
Sbjct: 61 TNFGWKNAFFDRLD----------MPSAYPWEYVWCFSFIPIVLAIYSFQRNKLKILHYA 110
Query: 110 VYGIVAFGYMPILYAVIYYFHDFWTYITLDPDEDIEDKEITMWQG-YPYALLWYIFIVLA 168
Y G P + + + Y +D+E ++G +P ++WYIF +A
Sbjct: 111 YYAEFVVGIFPCMIGLGGQLPELMEYA-----QDMEGSNTPTFKGIFPMVIIWYIFFAVA 165
Query: 169 LQVHTFSLYFSNNLIQCWRLRAAIKK 194
LQ+H FS+YF ++L W A +K+
Sbjct: 166 LQIHGFSMYFMHHLAAAW---APVKR 188
>sp|P0C655|JAGN_CAEBR Protein jagunal homolog OS=Caenorhabditis briggsae GN=CBG19742 PE=3
SV=1
Length = 189
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 1 MASRGMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADILD 60
M+SRG+ GTDG DF +RQ+IA HYQ S K+ LK+ H+L+ M K+ ++ L
Sbjct: 1 MSSRGVRAAGTDGNDFQNRQRIAQHYQESAQYKSVLKWFFVPHFLILVFMWLKVGSEFLR 60
Query: 61 -RLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
E L +P WEY+WC S + L LSS ++N + + Y G
Sbjct: 61 YNFGWKNAFFERLDMPAAYPWEYVWCLSFIPIVLALSSFQRNKLKVLHYAYYAEFICGIF 120
Query: 120 PILYAVIYYFHDFWTYITLDPDEDIEDKEITMWQG-YPYALLWYIFIVLALQVHTFSLYF 178
P + + + Y D+E ++G +P ++WYIF +ALQ+H FS+YF
Sbjct: 121 PCMIGLGGQLPELLEYAN-----DMEGSNTPTFKGIFPMVIIWYIFFAVALQIHGFSMYF 175
Query: 179 SNNLIQCWRLRAAIKK 194
++L W A +K+
Sbjct: 176 MHHLAAAW---APVKR 188
>sp|Q8N5M9|JAGN1_HUMAN Protein jagunal homolog 1 OS=Homo sapiens GN=JAGN1 PE=1 SV=1
Length = 183
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 99/199 (49%), Gaps = 21/199 (10%)
Query: 1 MASR-GMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MASR G GTDG+DF HR+++A HYQ SV K +K I+ H +++ +++AK+S L
Sbjct: 1 MASRAGPRAAGTDGSDFQHRERVAMHYQMSVTLKYEIKKLIYVHLVIWLLLVAKMSVGHL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
+L +++ +P WEY + S+L S LGL S +NNIS + + + F
Sbjct: 61 R-----LLSHDQVAMPYQ--WEYPYLLSILPSLLGLLSFPRNNISYLVLSMISMGLFSIA 113
Query: 120 PILYAVIYYFHDFWTYITLDPDEDI---EDKEITMWQGYPYALLWYIFIVLALQVHTFSL 176
P++Y + F P K G+ + Y+ +VLA+QVH + L
Sbjct: 114 PLIYGSMEMF----------PAAQQLYRHGKAYRFLFGFSAVSIMYLVLVLAVQVHAWQL 163
Query: 177 YFSNNLIQCWRLRAAIKKQ 195
Y+S L+ W KK
Sbjct: 164 YYSKKLLDSWFTSTQEKKH 182
>sp|Q5XJX0|JGN1A_DANRE Protein jagunal homolog 1-A OS=Danio rerio GN=jagn1a PE=2 SV=1
Length = 183
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 1 MASR-GMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MASR G GTDG DF HR+++ASHYQ S +K+ +K H+L++ ++ A+++ L
Sbjct: 1 MASRAGPRAAGTDGGDFKHREKVASHYQMSASSKSEIKKLTVVHFLIWILVAAQVAVSHL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
+ + L+ P WEY + SL+ SF+G ++ KNNIS + + F
Sbjct: 61 NL-------VSHDLVAMPYQWEYPYLLSLVPSFIGALAMPKNNISYLVISMISAGLFSVA 113
Query: 120 PILYAVIYYFHDFWTYITLDPDEDIEDKEITMWQGYPYALLWYIFIVLALQVHTFSLYFS 179
P+++ + F L K G+ + Y+ +V+A+QVH + +Y+S
Sbjct: 114 PLIFGAMEMF-------PLAQQLYRHGKAYRFIFGFSAVSVMYLLMVIAIQVHAWQIYYS 166
Query: 180 NNLIQCW 186
L+ W
Sbjct: 167 KKLLDAW 173
>sp|Q2NKY9|JAGN1_BOVIN Protein jagunal homolog 1 OS=Bos taurus GN=JAGN1 PE=2 SV=1
Length = 183
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 1 MASR-GMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MASR G GTDG+DF HR+++A HYQ SV K +K I+ H +++ +++AK+S L
Sbjct: 1 MASRAGPRAAGTDGSDFQHRERVAMHYQMSVTLKYEIKKLIYVHLVIWLLLVAKMSVGHL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
+L +++ +P WEY + S++ S LGL S +NNIS + + + F
Sbjct: 61 R-----LLSHDQVAMPYQ--WEYPYLLSVVPSLLGLLSFPRNNISYLVLSMISMGLFSIA 113
Query: 120 PILYAVIYYFHDFWTYITLDPDEDI---EDKEITMWQGYPYALLWYIFIVLALQVHTFSL 176
P++Y + F P K G+ + Y+ +VLA+QVH + L
Sbjct: 114 PLIYGSMEMF----------PAAQQLYRHGKAYRFLFGFSAVSVMYLVLVLAVQVHAWQL 163
Query: 177 YFSNNLIQCWRLRAAIKKQ 195
Y+S L+ W KK+
Sbjct: 164 YYSKKLLDSWFTSTQEKKR 182
>sp|Q4KM64|JAGN1_RAT Protein jagunal homolog 1 OS=Rattus norvegicus GN=Jagn1 PE=2 SV=1
Length = 183
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 1 MASR-GMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MASR G GTDG+DF HR+++A HYQ SV K +K I+ H +++ +++AK+S L
Sbjct: 1 MASRAGPRAAGTDGSDFQHRERVAMHYQMSVTLKYEIKKLIYVHLVIWLLLVAKMSVGHL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
+L +++ +P WEY + S++ S LGL S +NNIS + + + F
Sbjct: 61 R-----LLSHDQVAMPYQ--WEYPYLLSIVPSVLGLLSFPRNNISYLVLSMISMGLFSIA 113
Query: 120 PILYAVIYYFHDFWTYITLDPDED---IEDKEITMWQGYPYALLWYIFIVLALQVHTFSL 176
P++Y + F P K G+ + Y+ +VLA+QVH + L
Sbjct: 114 PLIYGSMEMF----------PAAQQLYRHGKAYRFLFGFSAVSVMYLVLVLAVQVHAWQL 163
Query: 177 YFSNNLIQCWRLRAAIKKQ 195
Y+S L+ W KK+
Sbjct: 164 YYSKKLLDSWFTSTQEKKR 182
>sp|Q5XKN4|JAGN1_MOUSE Protein jagunal homolog 1 OS=Mus musculus GN=Jagn1 PE=2 SV=2
Length = 183
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 21/199 (10%)
Query: 1 MASR-GMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MASR G GTDG+DF HR+++A HYQ SV K +K I+ H +++ +++AK+S L
Sbjct: 1 MASRAGPRAAGTDGSDFQHRERVAMHYQMSVTLKYEIKKLIYVHLVIWLLLVAKMSVGHL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
+L +++ +P WEY + S++ S LGL S +NNIS + + + F
Sbjct: 61 R-----LLSHDQVAMPYQ--WEYPYLLSIVPSVLGLLSFPRNNISYLVLSMISMGLFSIA 113
Query: 120 PILYAVIYYFHDFWTYITLDPDED---IEDKEITMWQGYPYALLWYIFIVLALQVHTFSL 176
P++Y + F P K G+ + Y+ +VLA+QVH + L
Sbjct: 114 PLIYGSMEMF----------PAAQQLYRHGKAYRFLFGFSAVSVMYLVLVLAVQVHAWQL 163
Query: 177 YFSNNLIQCWRLRAAIKKQ 195
Y+S L+ W KK+
Sbjct: 164 YYSKKLLDSWFTSTQEKKR 182
>sp|Q6NVQ1|JAGN1_XENTR Protein jagunal homolog 1 OS=Xenopus tropicalis GN=jagn1 PE=2 SV=1
Length = 183
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 1 MASR-GMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MASR G TGTDG+DF HR+++ASHYQ S K +K I+ H +++ ++ A++ L
Sbjct: 1 MASRAGPRATGTDGSDFQHRERVASHYQMSASLKNEIKKLIYAHLVIWLLIAAQMCVSHL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
+ + L+ P WEY + SL+ S GL S +NNIS + + F
Sbjct: 61 KL-------VSKDLVAMPYQWEYPYLLSLVPSLFGLVSFPRNNISYLVISMISTGLFSIA 113
Query: 120 PILYAVIYYFHDFWTYITLDPDEDIEDKEITMWQGYPYALLWYIFIVLALQVHTFSLYFS 179
P++Y + F + K G+ + Y+ +V+A+QVH + +Y+S
Sbjct: 114 PLIYGTLEMF-------PMAQQLYRHGKAYRFIFGFSAISVMYLLMVVAVQVHGWQIYYS 166
Query: 180 NNLIQCWRLRAAIKKQ 195
L+ W KK+
Sbjct: 167 KKLLDAWFTNTQEKKK 182
>sp|Q5M7C7|JAGN1_XENLA Protein jagunal homolog 1 OS=Xenopus laevis GN=jagn1 PE=2 SV=1
Length = 183
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 15/196 (7%)
Query: 1 MASR-GMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MASR G TG+DG+DF HR+++A HY+ S K +K I+ H +++ ++ A++ L
Sbjct: 1 MASRAGPRATGSDGSDFQHREKVAGHYKMSASLKNEIKKLIYAHLIIWMLIAAQMCVSHL 60
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
+ + L+ P WEY + SL+ S GL S +NNIS + + F
Sbjct: 61 KL-------VSKDLVAMPYQWEYPYLLSLVPSLFGLFSFPRNNISYLVISMISTGLFSIG 113
Query: 120 PILYAVIYYFHDFWTYITLDPDEDIEDKEITMWQGYPYALLWYIFIVLALQVHTFSLYFS 179
P++Y + F + K G+ + Y+ +V+A+QVH + +Y+S
Sbjct: 114 PLIYGTLEMF-------PMAQQLYRHGKAYRFIFGFSAISVMYLVMVVAVQVHGWQIYYS 166
Query: 180 NNLIQCWRLRAAIKKQ 195
L+ W KK+
Sbjct: 167 KKLLDSWFTNTQEKKK 182
>sp|Q1L864|JGN1B_DANRE Protein jagunal homolog 1-B OS=Danio rerio GN=jagn1b PE=2 SV=1
Length = 183
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 15/196 (7%)
Query: 1 MASR-GMYVTGTDGTDFSHRQQIASHYQTSVLNKTRLKYTIFFHYLLFFVMLAKLSADIL 59
MASR G TGTDG+D+ HR+++ASHYQ SV K+ +K H +++F++ A++ ++
Sbjct: 1 MASRAGPRATGTDGSDYQHRERVASHYQMSVALKSEIKKLNIAHAVVWFLVAAQV---LV 57
Query: 60 DRLDIFILEIEELLIPKPLLWEYIWCFSLLVSFLGLSSIRKNNISTMKKYVYGIVAFGYM 119
+L++ + ++ P WEY + S++ + ++ KNNIS + + F
Sbjct: 58 SQLNL----VSHKVVASPYQWEYTYLLSIIPTVFSFMALPKNNISYLVISMISGGLFCIG 113
Query: 120 PILYAVIYYFHDFWTYITLDPDEDIEDKEITMWQGYPYALLWYIFIVLALQVHTFSLYFS 179
PILY + F + K G+ + Y+ +++++QVH + +Y+S
Sbjct: 114 PILYGGMEMF-------PVAQQLYRHGKAYRFIFGFSAVSIMYLVLIISVQVHGWQIYYS 166
Query: 180 NNLIQCWRLRAAIKKQ 195
L+ W KK+
Sbjct: 167 KKLLDAWFTNTQDKKK 182
>sp|P0C2E4|OTCC_CLOPE Ornithine carbamoyltransferase, catabolic OS=Clostridium
perfringens (strain 13 / Type A) GN=arcB PE=3 SV=1
Length = 331
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 10 GTDGTDFSHRQQIASHYQTS--VLNKTRLKYTIFFHYL-LFFVMLAKLSADILDRLDIFI 66
G D + + R ++ + Y+ + ++NKT K T+F H L F ++ D++DRL + I
Sbjct: 236 GEDESLYPERVKLLTPYKVTREMMNKTGNKNTLFMHCLPSFHDEDTEVCKDMMDRLGLDI 295
Query: 67 LEIEE 71
E+E+
Sbjct: 296 REVED 300
>sp|Q0TUR4|OTCC_CLOP1 Ornithine carbamoyltransferase, catabolic OS=Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
GN=arcB PE=3 SV=1
Length = 331
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 10 GTDGTDFSHRQQIASHYQTS--VLNKTRLKYTIFFHYL-LFFVMLAKLSADILDRLDIFI 66
G D + + R ++ + Y+ + ++NKT K T+F H L F ++ D++DRL + I
Sbjct: 236 GEDESLYPERVKLLTPYKVTREMMNKTGNKNTLFMHCLPSFHDEDTEVCKDMMDRLGLDI 295
Query: 67 LEIEE 71
E+E+
Sbjct: 296 REVED 300
>sp|Q0SWK5|OTC_CLOPS Ornithine carbamoyltransferase OS=Clostridium perfringens (strain
SM101 / Type A) GN=arcB PE=3 SV=1
Length = 331
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 10 GTDGTDFSHRQQIASHYQTS--VLNKTRLKYTIFFHYL-LFFVMLAKLSADILDRLDIFI 66
G D + + R ++ + Y+ + ++NKT K T+F H L F ++ D++DRL + I
Sbjct: 236 GEDESLYPERVKLLTPYKVTREMMNKTGNKNTLFMHCLPSFHDEDTEVCKDMMDRLGLDI 295
Query: 67 LEIEE 71
E+E+
Sbjct: 296 REVED 300
>sp|Q38885|SCY1_ARATH Preprotein translocase subunit SCY1, chloroplastic OS=Arabidopsis
thaliana GN=SCY1 PE=1 SV=2
Length = 551
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 99 RKNNISTMKKYVYGIVAFG--YMPILYAVIYYFHDFWTYITLDPDEDIE 145
R IS +K + + G Y+P +I +F+ ++T++ LDPD+ E
Sbjct: 403 RFTGISALKNVAFALTPGGSFYLPTNILLIAFFNYYYTFLQLDPDDVSE 451
>sp|O74487|WTF20_SCHPO Uncharacterized protein wtf20 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=wtf20 PE=3 SV=1
Length = 258
Score = 30.4 bits (67), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 103 ISTMKKYVYGIVAFGY-----MPILYAVIYYFHDFWT 134
++ ++K ++G VAF PIL+ I+YF++ WT
Sbjct: 108 VNPLEKSIFGKVAFSVTIGITCPILFIAIFYFYETWT 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.144 0.459
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,438,466
Number of Sequences: 539616
Number of extensions: 2864620
Number of successful extensions: 6886
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 6852
Number of HSP's gapped (non-prelim): 25
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)