BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8503
(421 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9I8E6|COPG2_TAKRU Coatomer subunit gamma-2 OS=Takifugu rubripes GN=copg2 PE=3 SV=1
Length = 873
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/372 (54%), Positives = 242/372 (65%), Gaps = 62/372 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRSIATLAITTLLKTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH+ +MNFLS MLRD+G G EYK +I D
Sbjct: 392 RKHSAMMNFLSNMLRDDG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+IIEENPE+KETGLAHLCEFIEDCEHT LA +ILHLLGKEGPR QPSKYIRFI+NR
Sbjct: 420 CIISIIEENPESKETGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPQPSKYIRFIFNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LE+ VRAAAV+A+A+FGA C MD DDEVRDRAT+Y ++L +
Sbjct: 480 VVLESEAVRAAAVSALAKFGAQNDDLLPSVLVLMQRCMMDSDDEVRDRATFYMNVLQQKQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI-TTSDPTEMADRLRT 285
K L YI L VSIP LE++LH Y L PS PFDM S+PL+T T TE+A
Sbjct: 540 KALNAAYIFNGLSVSIPGLEKSLHQYTLEPSEKPFDMKSVPLATTPITEQKTEIA----- 594
Query: 286 PSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVRRD-------LRSVF 338
+ P A +R + Y E+L AA+PE L G LFKS+ PV+ +R +
Sbjct: 595 -PAATSKLPEKLAPSRQDIYQEQL-AAIPEFQGL-GPLFKSSDPVQLTEAETEYVVRCIK 651
Query: 339 HSYAVSMRRQLD 350
H++A M Q D
Sbjct: 652 HTFARHMVFQFD 663
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+++ D + KV KPNF A WEE DE E E+TF L+ + ++ EAV +I+
Sbjct: 752 LEDLEVTVPDHIQKVLKPNFGAAWEEV-GDEF--EKEETFALASVRTLDEAVGNII 804
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRST 109
R V N S +L GVFRGG DVLVR++LA++ GVTMQ+TVRS+
Sbjct: 814 RSDKVPENKNSHVLFLAGVFRGGHDVLVRARLALA--DGVTMQVTVRSS 860
>sp|Q9UBF2|COPG2_HUMAN Coatomer subunit gamma-2 OS=Homo sapiens GN=COPG2 PE=1 SV=1
Length = 871
Score = 362 bits (928), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 222/508 (43%), Positives = 278/508 (54%), Gaps = 131/508 (25%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRSIATLAITTLLKTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH+V+M FLS MLRD+G G EYK +I D
Sbjct: 392 RKHSVMMTFLSNMLRDDG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+I+EENPE+KE GLAHLCEFIEDCEHT LA +ILHLLGKEGPR PSKYIRFI+NR
Sbjct: 420 CIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIFNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LEN VRAAAV+A+A+FGA C MD DDEVRDRAT+Y ++L +
Sbjct: 480 VVLENEAVRAAAVSALAKFGAQNESLLPSILVLLQRCMMDTDDEVRDRATFYLNVLQQRQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLS-----------TITTSD 275
L YI L VS+P +E+ALH Y L PS PFDM SIPL+ T+ +
Sbjct: 540 MALNATYIFNGLTVSVPGMEKALHQYTLEPSEKPFDMKSIPLAMAPVFEQKAEITLVATK 599
Query: 276 PTEMA----DRLRTPSGGV-----------ASEPTAQATARVESY--------------- 305
P ++A D + + +SEP A E +
Sbjct: 600 PEKLAPSRQDIFQEQLAAIPEFLNIGPLFKSSEPVQLTEAETEYFVRCIKHMFTNHIVFQ 659
Query: 306 ------------------------YEKLSA----ALPEIANLPGTLFKSAAPVRRDLRSV 337
YE LS +LP N PG + D +V
Sbjct: 660 FDCTNTLNDQLLEKVTVQMEPSDSYEVLSCIPAPSLP--YNQPGICYTLVRLPDDDPTAV 717
Query: 338 FHSYAVSMRRQL-DVHSASGVG----------LEDLEISLSDQMAKVNKPNFLALWEEAE 386
S++ +M+ + D +GV LEDLE+++SD + KV KPNF A WEE
Sbjct: 718 AGSFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEV- 776
Query: 387 TDESMNEMEDTFCLSKMESIQEAVASIL 414
E E+TF LS ++++EAV +I+
Sbjct: 777 --GDTFEKEETFALSSTKTLEEAVNNII 802
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%), Gaps = 2/31 (6%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRS 108
G+FRGG D+LVRS+LA++ GVTMQ+TVRS
Sbjct: 829 GIFRGGYDLLVRSRLALA--DGVTMQVTVRS 857
>sp|Q9QXK3|COPG2_MOUSE Coatomer subunit gamma-2 OS=Mus musculus GN=Copg2 PE=2 SV=1
Length = 871
Score = 360 bits (925), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 221/508 (43%), Positives = 277/508 (54%), Gaps = 131/508 (25%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRSIATLAITTLLKTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCHKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH+V+M FLS MLRD+G G EYK +I D
Sbjct: 392 RKHSVMMTFLSNMLRDDG--------------------------------GFEYKKAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+I+EENPE+KE GLAHLCEFIEDCEHT LA +ILHLLGKEGPR PSKYIRFI+NR
Sbjct: 420 CIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIFNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LEN VRAAAV+A+A+FGA C MD DDEVRDRAT+Y ++L +
Sbjct: 480 VVLENEAVRAAAVSALAKFGAQNESLLPSILVLLQRCMMDTDDEVRDRATFYLNVLQQRQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLS-----------TITTSD 275
L YI L VSIP +E+ALH Y L PS PFDM SIPL+ T+ T
Sbjct: 540 MALNATYIFNGLTVSIPGMEKALHQYTLEPSEKPFDMKSIPLAMAPVFEQKSEITLVTPK 599
Query: 276 PTEMA----DRLRTPSGGV-----------ASEPTAQATARVESY--------------- 305
P ++A D + + +SEP A E +
Sbjct: 600 PEKLAPSRQDIFQEQLAAIPEFMNLGPLFKSSEPVQLTEAETEYFVRCVKHMFTDHIVFQ 659
Query: 306 ------------------------YEKLSA----ALPEIANLPGTLFKSAAPVRRDLRSV 337
YE L +LP N PG + D +V
Sbjct: 660 FDCTNTLNDQLLEKVTVQMEPSDSYEVLCCIPAPSLP--YNQPGICYTLVRLPDEDPTAV 717
Query: 338 FHSYAVSMRRQL-DVHSASGVG----------LEDLEISLSDQMAKVNKPNFLALWEEAE 386
+++ +M+ + D +GV LEDLE+++SD + K+ KPNF A WEE
Sbjct: 718 AGTFSCTMKFTVRDCDPNTGVPDEDGYDDEYVLEDLEVTVSDHIQKILKPNFAAAWEEV- 776
Query: 387 TDESMNEMEDTFCLSKMESIQEAVASIL 414
E E+TF LS ++++EAV +I+
Sbjct: 777 --GDAFEKEETFALSSTKTLEEAVNNII 802
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%), Gaps = 2/31 (6%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRS 108
GV+RGG D+LVRS+LA++ GVTMQ+TVRS
Sbjct: 829 GVYRGGYDLLVRSRLALA--DGVTMQVTVRS 857
>sp|Q9PUE4|COPG2_DANRE Coatomer subunit gamma-2 OS=Danio rerio GN=copg2 PE=2 SV=2
Length = 873
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 199/372 (53%), Positives = 241/372 (64%), Gaps = 62/372 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRSIATLAITTLLKTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH+V+MNFLS MLRD+G G EYK +I D
Sbjct: 392 RKHSVMMNFLSNMLRDDG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+IIEENPE+KETGLAHLCEFIEDCEHT LA +ILHLLGKEGPR PSKYIRFI+NR
Sbjct: 420 CIISIIEENPESKETGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPTPSKYIRFIFNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LE+ VRAAAV+A+A+FGA C MD DDEVRDRAT+Y ++L +
Sbjct: 480 VVLESEAVRAAAVSALAKFGAQNDDLLPSVLVLMQRCMMDSDDEVRDRATFYMNVLQQKQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI-TTSDPTEMADRLRT 285
K L YI L VS+ LE++LH Y L PS PFDM ++PL+T T TE+A
Sbjct: 540 KALNAAYIFNGLSVSVLGLEKSLHQYTLEPSEKPFDMKTVPLATAPITEHKTEIA----- 594
Query: 286 PSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVRRD-------LRSVF 338
+ P A +R + Y E+LS A+PE L G LFKS+ PV+ +R +
Sbjct: 595 -PVATSKLPEKLAPSRQDIYQEQLS-AIPEFQGL-GPLFKSSEPVQLTEAETEYVVRCIK 651
Query: 339 HSYAVSMRRQLD 350
H++A M Q D
Sbjct: 652 HTFANHMIFQFD 663
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE++++D + KV KPNF A W+E DE E E+TF L+ + ++ EAV +I+
Sbjct: 752 LEDLEVTVADHIQKVLKPNFAAAWDEV-GDEC--EKEETFALATVRTLDEAVNNIV 804
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%), Gaps = 2/32 (6%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRST 109
GVFRGG DVLVR++LA++ GVT+Q+TVRST
Sbjct: 831 GVFRGGHDVLVRARLALA--DGVTIQVTVRST 860
>sp|A2VE21|COPG2_BOVIN Coatomer subunit gamma-2 OS=Bos taurus GN=COPG2 PE=2 SV=1
Length = 871
Score = 355 bits (912), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/371 (52%), Positives = 237/371 (63%), Gaps = 62/371 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRSIATLAITTLLKTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH+V+M FLS MLRD+G G EYK +I D
Sbjct: 392 RKHSVMMTFLSNMLRDDG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II I+EENPE+KE GLAHLCEFIEDCEHT LA +ILHLLGKEGPR PSKYIRFI+NR
Sbjct: 420 CIIHIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGPRTPVPSKYIRFIFNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LEN VRAAAV+A+A+FGA C MD DDEVRDRAT+Y ++L +
Sbjct: 480 VVLENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDTDDEVRDRATFYLNVLQQRQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTP 286
L YI L VS+P +E+ALH Y L PS PFDM SIPL+T + +
Sbjct: 540 MALNATYIFNGLTVSVPGMEKALHQYTLEPSEKPFDMKSIPLATAPVFEQ-------KAE 592
Query: 287 SGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVRRD-------LRSVFH 339
V+++P A +R + + E+L AA+PE NL G LFKS+ PV+ +R V H
Sbjct: 593 ITLVSTKPEKLAPSRQDIFQEQL-AAIPEFMNL-GPLFKSSEPVQLTEAETEYFVRCVKH 650
Query: 340 SYAVSMRRQLD 350
+ + Q D
Sbjct: 651 MFTNHIVFQFD 661
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+++SD + KV KPNF A WEE + E E+TF LS ++++EAV +I+
Sbjct: 750 LEDLEVTVSDHIQKVMKPNFAAAWEEV---GNTFEKEETFALSSTKTLEEAVNNII 802
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%), Gaps = 2/34 (5%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSG 111
GV+RGG D+LVRS+LA++ GVTMQ+TVRS G
Sbjct: 829 GVYRGGYDLLVRSRLALA--DGVTMQVTVRSKEG 860
>sp|Q6DKD7|COPG2_XENLA Coatomer subunit gamma-2 OS=Xenopus laevis GN=copg2 PE=2 SV=1
Length = 872
Score = 352 bits (902), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 228/346 (65%), Gaps = 56/346 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRSIATLAITTLLKTGSESSVDRLMKQI+TFVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISTFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH+V+M FLS MLRD+G G EYK +I D
Sbjct: 392 RKHSVMMTFLSNMLRDDG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+IIEENP++KE+GLAH+CEFIEDCEHT LA +ILHLLGKEGP+ PSKYIRFI+NR
Sbjct: 420 CIISIIEENPDSKESGLAHMCEFIEDCEHTVLATKILHLLGKEGPKTPTPSKYIRFIFNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LEN VRAAAV+A+A+FGA C MD DDEVRDRAT+Y ++L Q
Sbjct: 480 VVLENEAVRAAAVSALAKFGAQNESLLPSVLVLLQRCMMDSDDEVRDRATFYFNVLKQQQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSD-PTEMADRLRT 285
L YI L VS+ +E+ALH Y L PS PFDM ++PL+T+ D T++A
Sbjct: 540 LALNAAYIFNGLTVSVFGMEKALHQYTLEPSEKPFDMKTVPLATVPFMDQKTDLAPM--- 596
Query: 286 PSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR 331
+P R + + E+L A +PE NL G LFKS+ PV+
Sbjct: 597 ----ATKQPEKAVPVRQDIFQEQL-AVIPEFKNL-GPLFKSSEPVQ 636
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 14/108 (12%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASGVG----------LEDLEISL 366
N PG + + D +V +++ +M+ + D +GV LEDLE+SL
Sbjct: 699 NQPGICYTLVSLPDDDPTAVSCTFSCTMKFVVRDCDPQTGVPDDEGYSDEYVLEDLELSL 758
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
SD + KV KPNF A WEE E E+TF L+ ++++EAV +I+
Sbjct: 759 SDHIQKVLKPNFGASWEEV---GDAYEKEETFALTTTKTLEEAVNNII 803
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRS 108
R V N S +L GVFRGG D LVRS+LA++ GVTMQ+TVRS
Sbjct: 813 RSDKVPENKNSHVLYLSGVFRGGHDALVRSRLALA--DGVTMQVTVRS 858
>sp|Q66JI9|COPG2_XENTR Coatomer subunit gamma-2 OS=Xenopus tropicalis GN=copg2 PE=2 SV=1
Length = 872
Score = 347 bits (890), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 185/346 (53%), Positives = 229/346 (66%), Gaps = 56/346 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRSIATLAITTLLKTGSESSVDRLMKQI+TFVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISTFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH+V+M FLS MLRD+G G EYK +I D
Sbjct: 392 RKHSVMMTFLSNMLRDDG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+IIEENP++KE+GLAHLCEFIEDCEHT LA +ILHLLG+EGP+ PSKYIRFI+NR
Sbjct: 420 CIISIIEENPDSKESGLAHLCEFIEDCEHTVLATKILHLLGREGPKTPTPSKYIRFIFNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LEN VRAAAV+A+A+FGA C MD DDEVRDRAT+Y ++L
Sbjct: 480 VVLENEAVRAAAVSALAKFGAQNEPLLPSVLVLLQRCMMDSDDEVRDRATFYFNVLNQNQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTP 286
L YI L VS+ +E+ALH Y L PS PFDM ++PL+T+ + +T
Sbjct: 540 LALNTAYIFNGLTVSVFGMEKALHQYTLEPSEKPFDMKTVPLATVPFLEQ-------KTD 592
Query: 287 SGGVAS-EPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR 331
+A+ +P R + + ++L AA+PE NL G LFKS+ PV+
Sbjct: 593 LAPIATKQPEKMVPVRQDIFQDQL-AAIPEFKNL-GPLFKSSEPVQ 636
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE++LSD + K+ KPNF A WEE E E+TF L+ +S++EAV +I+
Sbjct: 751 LEDLEVTLSDHIQKILKPNFGAAWEEI---GDTYEKEETFALTTTKSLEEAVNNII 803
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRS 108
R V N S +L GV+RGG DVLVRS+LA++ GVTMQ+TVRS
Sbjct: 813 RSDKVPENKNSHVLYLSGVYRGGHDVLVRSRLALA--DGVTMQVTVRS 858
>sp|P53620|COPG1_BOVIN Coatomer subunit gamma-1 OS=Bos taurus GN=COPG1 PE=1 SV=1
Length = 874
Score = 345 bits (886), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 192/372 (51%), Positives = 235/372 (63%), Gaps = 61/372 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++D+NRSIATLAITTLLKTGSE S+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDANRSIATLAITTLLKTGSEGSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKHAVLMNFL +MLR+EG G EYK +I D
Sbjct: 392 RKHAVLMNFLFSMLREEG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGPR PSKYIRFIYNR
Sbjct: 420 CIISIIEENAESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPRTSNPSKYIRFIYNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LE+A VRA AV+A+A+FGA C MD D+EVRDRAT+Y ++L +
Sbjct: 480 VVLEHAEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTP 286
K L YI+ L VSIP LERAL Y L PS PFD+ S+PL+T ++ R +
Sbjct: 540 KALNAGYILNGLAVSIPGLERALQQYTLEPSEKPFDLKSVPLATAPLAE-----QRTEST 594
Query: 287 SGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSA-APV-------RRDLRSVF 338
A +P A R E + E+L AA+PE L G LFKS+ PV +R
Sbjct: 595 PVTAAKQPEKVAATRQEIFQEQL-AAVPEFQGL-GPLFKSSPEPVALTESETEYVIRCTK 652
Query: 339 HSYAVSMRRQLD 350
H++ M Q D
Sbjct: 653 HTFTDHMVFQFD 664
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASGVG----------LEDLEISL 366
N PGT + A + D +V +++ M+ + D +G LEDLE+++
Sbjct: 701 NQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGEADDEGYEDEYVLEDLEVTI 760
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+D + KV K NF A W+E DE + E+TF LS +++++EAV +I+
Sbjct: 761 ADHIQKVMKLNFEAAWDEV-GDEF--QKEETFTLSTIKTLEEAVGNIV 805
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 2/35 (5%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGL 112
GVFRGG D+LVRS+L + DT VTMQ+T RS+ L
Sbjct: 832 GVFRGGHDILVRSRLLL-LDT-VTMQVTARSSEEL 864
>sp|Q4AEF8|COPG1_RAT Coatomer subunit gamma-1 OS=Rattus norvegicus GN=Copg1 PE=2 SV=1
Length = 874
Score = 345 bits (885), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 184/341 (53%), Positives = 224/341 (65%), Gaps = 53/341 (15%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRSIATLAITTLLKTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKHAVLMNFL MLR+EG G EYK +I D
Sbjct: 392 RKHAVLMNFLFTMLREEG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP+ PSKYIRFIYNR
Sbjct: 420 CIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LE+ VRA AV+A+A+FGA C MD D+EVRDRAT+Y ++L +
Sbjct: 480 VVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTP 286
K L YI+ L VSIP LE+AL Y L PS PFD+ S+PL+T ++ R +
Sbjct: 540 KALNAGYILNGLTVSIPGLEKALQQYTLEPSEKPFDLKSVPLATTPMTE-----QRPEST 594
Query: 287 SGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSA 327
S +P A R E + E+L AA+PE L G LFKS+
Sbjct: 595 STAAVKQPEKVAATRQEIFQEQL-AAVPEFQGL-GPLFKSS 633
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASG----------VGLEDLEISL 366
N PGT + A + D +V +++ M+ + D +G LEDLE+++
Sbjct: 701 NQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPNTGEIDEEGYEDEYVLEDLEVTV 760
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+D + KV K NF A W+E DE E E+TF LS +++++EAV +I+
Sbjct: 761 ADHIQKVMKVNFEAAWDEV-GDEF--EKEETFTLSTIKTLEEAVGNIV 805
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 2/35 (5%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGL 112
GVFRGG D+LVRS+L + DT VTMQ+T RS+ L
Sbjct: 832 GVFRGGHDILVRSRLLL-LDT-VTMQVTARSSEEL 864
>sp|Q9QZE5|COPG1_MOUSE Coatomer subunit gamma-1 OS=Mus musculus GN=Copg1 PE=2 SV=1
Length = 874
Score = 345 bits (884), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 186/342 (54%), Positives = 226/342 (66%), Gaps = 55/342 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRSIATLAITTLLKTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKHAVLMNFL MLR+EG G EYK +I D
Sbjct: 392 RKHAVLMNFLFTMLREEG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP+ PSKYIRFIYNR
Sbjct: 420 CIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LE+ VRA AV+A+A+FGA C MD D+EVRDRAT+Y ++L +
Sbjct: 480 VVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMAD-RLRT 285
K L YI+ L VSIP LE+AL Y L PS PFD+ S+PL+T T MA+ R +
Sbjct: 540 KALNAGYILNGLTVSIPGLEKALQQYTLEPSEKPFDLKSVPLAT------TPMAEQRPES 593
Query: 286 PSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSA 327
+ +P A R E + E+L AA+PE L G LFKS+
Sbjct: 594 TATAAVKQPEKVAATRQEIFQEQL-AAVPEFQGL-GPLFKSS 633
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASG----------VGLEDLEISL 366
N PGT + A D +V +++ M+ + D +G LEDLE+++
Sbjct: 701 NQPGTCYTLVALPTEDPTAVACTFSCVMKFTVKDCDPNTGEIDEEGYEDEYVLEDLEVTV 760
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+D + KV K NF A W+E DE E E+TF LS +++++EAV +I+
Sbjct: 761 ADHIQKVMKVNFEAAWDEV-GDEF--EKEETFTLSTIKTLEEAVGNIV 805
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 2/35 (5%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGL 112
GVFRGG D+LVRS+L + DT VTMQ+T RS+ L
Sbjct: 832 GVFRGGHDILVRSRLLL-LDT-VTMQVTARSSEEL 864
>sp|Q9Y678|COPG1_HUMAN Coatomer subunit gamma-1 OS=Homo sapiens GN=COPG1 PE=1 SV=1
Length = 874
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/374 (52%), Positives = 238/374 (63%), Gaps = 65/374 (17%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRSIATLAITTLLKTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKHAVLMNFL MLR+EG G EYK +I D
Sbjct: 392 RKHAVLMNFLFTMLREEG--------------------------------GFEYKRAIVD 419
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP+ PSKYIRFIYNR
Sbjct: 420 CIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTTNPSKYIRFIYNR 479
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+LE+ VRA AV+A+A+FGA C MD D+EVRDRAT+Y ++L +
Sbjct: 480 VVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQ 539
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTP 286
K L YI+ L VSIP LERAL Y L PS PFD+ S+PL+T MA++ RT
Sbjct: 540 KALNAGYILNGLTVSIPGLERALQQYTLEPSEKPFDLKSVPLAT------APMAEQ-RTE 592
Query: 287 SGGVAS--EPTAQATARVESYYEKLSAALPEIANLPGTLFKSA-APV-------RRDLRS 336
S + + +P A R E + E+L AA+PE L G LFKS+ PV +R
Sbjct: 593 STPITAVKQPEKVAATRQEIFQEQL-AAVPEFRGL-GPLFKSSPEPVALTESETEYVIRC 650
Query: 337 VFHSYAVSMRRQLD 350
H++ M Q D
Sbjct: 651 TKHTFTNHMVFQFD 664
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASG----------VGLEDLEISL 366
N PGT + A + D +V +++ M+ + D +G LEDLE+++
Sbjct: 701 NQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTV 760
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+D + KV K NF A W+E DE E E+TF LS +++++EAV +I+
Sbjct: 761 ADHIQKVMKLNFEAAWDEV-GDEF--EKEETFTLSTIKTLEEAVGNIV 805
Score = 38.9 bits (89), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGL 112
GVFRGG D+LVRS+L + DT VTMQ+T RS L
Sbjct: 832 GVFRGGHDILVRSRLLL-LDT-VTMQVTARSLEEL 864
>sp|Q8I0G5|COPG_DROME Coatomer subunit gamma OS=Drosophila melanogaster GN=gammaCop PE=2
SV=1
Length = 883
Score = 330 bits (847), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 199/389 (51%), Positives = 243/389 (62%), Gaps = 62/389 (15%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS+ATLAITTLLKTG+ESSV+RLMKQI+TFV+EISDEFK+VVV+AI ALC K+P
Sbjct: 341 LITDSNRSVATLAITTLLKTGAESSVERLMKQISTFVAEISDEFKVVVVQAICALCTKYP 400
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH VLMNFLS MLR+EG GLEYK SI D
Sbjct: 401 RKHTVLMNFLSGMLREEG--------------------------------GLEYKTSIVD 428
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
TIITIIEEN +AKE+GL+HLCEFIEDCEH SLAVRILHLLGKEGP A PSKYIRFIYNR
Sbjct: 429 TIITIIEENADAKESGLSHLCEFIEDCEHVSLAVRILHLLGKEGPFAATPSKYIRFIYNR 488
Query: 181 VILENATVRAAAVTAMAQFGA--------------LCQMDGDDEVRDRATYYHSILASQN 226
VILE+ VRAAAVTAMAQFGA CQMD DDEVRDRATYY SIL S+
Sbjct: 489 VILESPIVRAAAVTAMAQFGASCPALLSNILVLLGRCQMDPDDEVRDRATYYLSILNSER 548
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTP 286
+L ++YIIE S+ LE++L + T FD+S +P + I P D +
Sbjct: 549 PELYKNYIIERENCSLALLEKSLVEHLNGDVDTRFDISIVPKAAIV--KPVIANDVMLVT 606
Query: 287 SGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR-------RDLRSVFH 339
S S P R E +L A LP I L G + +S AP++ ++ + H
Sbjct: 607 S----SAPRPPKITREEESAARL-AQLPGIQVL-GPIHRSTAPIQLTESETEYTVQCIKH 660
Query: 340 SYAVSMRRQLD-VHSASGVGLEDLEISLS 367
+ + Q D +++ S LE++ + L+
Sbjct: 661 IFGQHVVFQFDCLNTLSDQILENVRVELT 689
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE++++DQ+ K K NF W+ A+++E + + EDTF LS + ++Q+AV +I+
Sbjct: 760 LEDLELTVADQIQKTRKNNFQVSWDAADSEEWL-QAEDTFVLSAVTTLQDAVNTIV 814
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%), Gaps = 2/32 (6%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRST 109
G FRGG ++LVR+KLA+S GVT+ LTVRST
Sbjct: 841 GTFRGGAEILVRAKLALSE--GVTLNLTVRST 870
>sp|Q7PVF6|COPG_ANOGA Coatomer subunit gamma OS=Anopheles gambiae GN=gammaCop PE=3 SV=2
Length = 868
Score = 330 bits (846), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 202/388 (52%), Positives = 247/388 (63%), Gaps = 62/388 (15%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS+ATLAITTLLKTG+ESSV+RLMKQIATFV+EISDEFK+VVV+AIR+LC KFP
Sbjct: 336 LIADSNRSVATLAITTLLKTGAESSVERLMKQIATFVAEISDEFKLVVVQAIRSLCTKFP 395
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKHAV MNFLS MLR+EG GLEYK SI D
Sbjct: 396 RKHAVTMNFLSGMLREEG--------------------------------GLEYKTSIVD 423
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
TII IIEENP+AKE GL HLCEFIEDCEHTSLAVRILHLLGKEGP +K PS+YIRFIYNR
Sbjct: 424 TIILIIEENPDAKEAGLGHLCEFIEDCEHTSLAVRILHLLGKEGPYSKCPSRYIRFIYNR 483
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
VILENATVRAAAV A+AQFGA CQMD DDEVRDRATYY++IL N
Sbjct: 484 VILENATVRAAAVAAIAQFGACCPDLLPNVLVLLNRCQMDCDDEVRDRATYYYTILNQSN 543
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTP 286
+L + +I + +VS+P LE++L+ + P FD+S +P S + + E +
Sbjct: 544 PELNKRFIADHEIVSLPLLEKSLNEHLKGPLAERFDLSIVPKSQVIQPEVNEEVMIMNKA 603
Query: 287 SGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR-------RDLRSVFH 339
+ P R E EKL A+P I ++ G L KS APV+ + + H
Sbjct: 604 A------PKIARVNREEVNTEKL-LAIPGIHHV-GALHKSCAPVQLTESETEYTVSCIKH 655
Query: 340 SYAVSMRRQLD-VHSASGVGLEDLEISL 366
+A + Q D V++ S LE++ + L
Sbjct: 656 CFAHHIVFQFDCVNTLSDQLLENVRVDL 683
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LED+E++++DQM K K NFLA WE A+T+E + E EDTF LS + S+Q+AV +IL
Sbjct: 755 LEDIEVTVADQMQKSKKQNFLAAWESADTEEWV-EAEDTFELSSVTSLQDAVNTIL 809
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 29/33 (87%), Gaps = 2/33 (6%)
Query: 77 EGVFRGGIDVLVRSKLAVSADTGVTMQLTVRST 109
+G FRGG++VLVRSKLAV+ GVTMQLTVRST
Sbjct: 825 DGTFRGGVEVLVRSKLAVA--DGVTMQLTVRST 855
>sp|Q29AE5|COPG_DROPS Coatomer subunit gamma OS=Drosophila pseudoobscura pseudoobscura
GN=gammaCop PE=3 SV=1
Length = 878
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 193/389 (49%), Positives = 242/389 (62%), Gaps = 62/389 (15%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS+ATLAITTLLKTG+ESSV+RLMKQI+TFV+EISDEFKIVVV+AI ALC K+P
Sbjct: 336 LITDSNRSVATLAITTLLKTGAESSVERLMKQISTFVAEISDEFKIVVVQAICALCTKYP 395
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH VLMNFLS MLR+EG GLEYK SI D
Sbjct: 396 RKHTVLMNFLSGMLREEG--------------------------------GLEYKTSIVD 423
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
TIITIIEEN +AKE+GL+HLCEFIEDCEH SLAVRILHL+GKEGP A PSKYIRFIYNR
Sbjct: 424 TIITIIEENADAKESGLSHLCEFIEDCEHVSLAVRILHLMGKEGPFAATPSKYIRFIYNR 483
Query: 181 VILENATVRAAAVTAMAQFGA--------------LCQMDGDDEVRDRATYYHSILASQN 226
VILE+ VRAAAVTA++QFGA CQMD DDEVRDRATYY +IL ++
Sbjct: 484 VILESPIVRAAAVTALSQFGASCPALLTNILVLLGRCQMDPDDEVRDRATYYLTILNTER 543
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTP 286
L ++YIIE S+ LE+AL + FD+S +P + E+++ +
Sbjct: 544 ADLYKNYIIERENCSLALLEKALVDHLNGDLEKRFDISVVPKAAAVVR--AEISNDVML- 600
Query: 287 SGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR-------RDLRSVFH 339
V S P R E +L A LP I L G + +S AP++ ++ + H
Sbjct: 601 ---VTSAPRPPKITREEESASRL-AQLPGIQVL-GPVHRSTAPIQLTESETEYTVQCIKH 655
Query: 340 SYAVSMRRQLD-VHSASGVGLEDLEISLS 367
+ + Q D +++ S LE++ + L+
Sbjct: 656 IFGQHVVFQFDCLNTLSDQFLENVRVELT 684
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LED+EI+++DQ+ K K NF W+ A+++E + + EDTF LS + ++Q+AV +I+
Sbjct: 755 LEDMEITVADQIQKSKKNNFQVAWDAADSEEWL-QAEDTFVLSAVTTLQDAVNTIM 809
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 26/32 (81%), Gaps = 2/32 (6%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRST 109
G FRGG +VLVR+KLA+S GVT+ LTVRST
Sbjct: 836 GTFRGGAEVLVRAKLALSE--GVTLNLTVRST 865
>sp|Q6Z382|COPG2_ORYSJ Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica
GN=Os07g0201100 PE=2 SV=1
Length = 889
Score = 308 bits (788), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/355 (48%), Positives = 223/355 (62%), Gaps = 69/355 (19%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+ISD NRSIATLAITTLLKTG+ESSVDRLMKQ+ F+S+I+DEFKIVVVEAIR+LCLKFP
Sbjct: 338 LISDQNRSIATLAITTLLKTGNESSVDRLMKQMTNFMSDIADEFKIVVVEAIRSLCLKFP 397
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
K+ LMNFLS +LR+EG G EYK +I D
Sbjct: 398 LKYRSLMNFLSNILREEG--------------------------------GFEYKKAIVD 425
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
+II +I + P+AKE+GL HLCEFIEDCE T ++ +ILH LG EGP+ PSKYIR+IYNR
Sbjct: 426 SIIILIRDIPDAKESGLFHLCEFIEDCEFTYMSTQILHFLGNEGPKTSDPSKYIRYIYNR 485
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILA--- 223
VILENATVRA+AV+ +A+FGAL C DGDDEVRDRAT Y +L
Sbjct: 486 VILENATVRASAVSTLAKFGALVDSLKPRIFVLLRRCLFDGDDEVRDRATLYLKLLGGEA 545
Query: 224 --SQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMAD 281
+ ++ + +++ + + +LE +L Y PS PFD+SS+ L T S P +A+
Sbjct: 546 TVGETEKDVNEFLFGSFDIPLVNLETSLQNY--EPSEAPFDISSVSLE--TKSQP--LAE 599
Query: 282 RLRTPSGGVASEPTAQATA------RVESYYEKLSAALPEIANLPGTLFKSAAPV 330
+ T +PT A+A V++ YEKL +++PE A G LFKS+APV
Sbjct: 600 KKTT-----GKKPTGPASALSGPVPTVDASYEKLLSSIPEFAGF-GKLFKSSAPV 648
Score = 39.3 bits (90), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLEI+ +D M KV NF WE + + +E D + L ES+ EAV++++
Sbjct: 764 LEDLEITSADYMLKVGVSNFRNAWESMDPE---SERVDEYGLGARESLAEAVSAVI 816
>sp|Q22498|COPG_CAEEL Probable coatomer subunit gamma OS=Caenorhabditis elegans
GN=T14G10.5 PE=2 SV=1
Length = 870
Score = 298 bits (763), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 175/391 (44%), Positives = 235/391 (60%), Gaps = 64/391 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
I+D NRSIATLAITTLLKTG+ESSV+RLM+QIA FV+EISDEFKIVVV+AIR+LC ++P
Sbjct: 327 FITDPNRSIATLAITTLLKTGAESSVERLMQQIAGFVNEISDEFKIVVVDAIRSLCSRYP 386
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RKH V+M FL+ MLR +G + +YK +I +
Sbjct: 387 RKHTVMMPFLAKMLRSDGSY--------------------------------DYKKAIVE 414
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
TII IIEENP+AK GLAHLCEFIEDCEH +L+ R+LHLLG+E P+ PS YIRFIYNR
Sbjct: 415 TIIAIIEENPDAKVAGLAHLCEFIEDCEHDNLSTRVLHLLGREAPKTPNPSSYIRFIYNR 474
Query: 181 VILENATVRAAAVTAMAQFGALCQ--------------MDGDDEVRDRATYYHSILASQN 226
VILE+ VRAAAVTA+A+FGA C +D DDEVRDRAT+Y +L
Sbjct: 475 VILESTKVRAAAVTALAKFGAQCVDLRPSIQVLLKRCLLDSDDEVRDRATFYLKMLTEAA 534
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPS-PTPFDMSSIPLSTITTSDPTEMADRLRT 285
+ LI ++I++ L VS LER++ Y S +PFD+ +P++ S P + R
Sbjct: 535 EGLIHNFILDGLQVSPSGLERSILDYLRSGSYSSPFDLRVVPVTQQALSQPEK-----RV 589
Query: 286 PSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPV-------RRDLRSVF 338
P + E +VE Y +L AA+P+ A L G +FKS+ + + +
Sbjct: 590 PQ--LVEEEEKPKAPKVEPYAAQL-AAIPQFAAL-GPVFKSSTRIALTESIAEYTVHMIK 645
Query: 339 HSYAVSMRRQLDV-HSASGVGLEDLEISLSD 368
H++A +M Q + ++ + L D+ + L D
Sbjct: 646 HTFANAMVLQFECKNTMNDQLLLDVSVELED 676
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASI 413
LE++++++SD + V K +F + WE D + E+TF LS +E+I +AV I
Sbjct: 746 LEEVDVNVSDSVQGVAKSSFGSAWEALGDDAT---REETFQLSTVENIPDAVKKI 797
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 78 GVFRGGIDVLVRSKLAVSA-DTGVTMQLTVRSTSGLEYKASIADTIITII 126
GVFRGG DVL ++ +AV D + M + ++S L +AD +I+ +
Sbjct: 825 GVFRGGYDVLSKATVAVDPNDNSIAMNIIIKSNEPL-----VADLVISAV 869
>sp|Q0WW26|COPG_ARATH Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1
SV=2
Length = 886
Score = 288 bits (736), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 170/371 (45%), Positives = 225/371 (60%), Gaps = 60/371 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+ISD NRSIATLAITTLLKTG+ESSV+RLMKQI F+S+I+DEFKIVVV+AIR+LC+KFP
Sbjct: 337 LISDQNRSIATLAITTLLKTGNESSVERLMKQITNFMSDIADEFKIVVVDAIRSLCVKFP 396
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
K+ LM FLS +LR+EG G EYK +I D
Sbjct: 397 LKYRSLMTFLSNILREEG--------------------------------GFEYKRAIVD 424
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
+I+TII + P+AKE+GL HLCEFIEDCE T L+ +ILH LG EGP PSKYIR+IYNR
Sbjct: 425 SIVTIIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGIEGPNTSDPSKYIRYIYNR 484
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V LENATVRAAAV+ +A+FG + C D DDEVRDRAT Y S+L
Sbjct: 485 VHLENATVRAAAVSTLAKFGFMVESLKPRITVLLKRCIYDSDDEVRDRATLYLSVLGGDG 544
Query: 227 ----KQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADR 282
+ +D++ L V + ++E +L Y PS FD++S+P + + E +
Sbjct: 545 TVDTDKESKDFLFGSLEVPLVNMETSLKNY--EPSEEAFDINSVP-KEVKSQPLAEKKAQ 601
Query: 283 LRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVRRDLRSVFHSYA 342
+ P+ G+ + P A A+ YE+L +++PE A G LFKS+ PV +L YA
Sbjct: 602 GKKPT-GLGAPPAAPASGF--DGYERLLSSIPEFAAF-GKLFKSSLPV--ELTEAETEYA 655
Query: 343 VSMRRQL-DVH 352
V++ + + D H
Sbjct: 656 VNVVKHIFDSH 666
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+ D M KV NF WE + + +E D + L + ES+ EAV +++
Sbjct: 761 LEDLEVVAGDYMVKVGVSNFRNAWESMDEE---DERVDEYGLGQRESLGEAVKAVM 813
>sp|Q8H852|COPG1_ORYSJ Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica
GN=Os03g0227000 PE=2 SV=2
Length = 884
Score = 281 bits (719), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 220/368 (59%), Gaps = 61/368 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
++SD NRSIATLAITTLLKTG+ESSVDRLMKQI F+S+I+DEFKIVVVEAIR+LCLKFP
Sbjct: 335 LMSDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFP 394
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
K+ +MNFLS LR+EG G EYK +I D
Sbjct: 395 LKYRSMMNFLSNSLREEG--------------------------------GFEYKKAIVD 422
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
+I+T+I E P+AKE GL +LCEFIEDCE T L+ +ILHLLG EGPR PS+YIR+IYNR
Sbjct: 423 SIVTLISEIPDAKEIGLLYLCEFIEDCEFTYLSSQILHLLGNEGPRTSDPSRYIRYIYNR 482
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQ- 225
VILENATVRA+AV+ +A+FGAL C D DDEVRDRAT Y L +
Sbjct: 483 VILENATVRASAVSTLAKFGALVDALKPRIFVLLRRCLFDTDDEVRDRATLYLQTLDGEV 542
Query: 226 ----NKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMAD 281
++ +++++ V + +LE +L Y PS PFD+S + S S P +
Sbjct: 543 AVGSTEKDVKEFLFGSFDVPLANLEASLKTY--EPSEEPFDISLV--SREVKSQPLQ--- 595
Query: 282 RLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVRRDLRSVFHSY 341
+ P + A A Y+K+ +++PE + G LFKS+ PV +L Y
Sbjct: 596 EKKAPGKKPPAGAPAPAPVPAVDAYQKILSSIPEFSGF-GRLFKSSEPV--ELTEAETEY 652
Query: 342 AVSMRRQL 349
A+++ + +
Sbjct: 653 AINVVKHI 660
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+EDLEI +D M +V NF WE + + +E D + L ES+ EAV++++
Sbjct: 759 IEDLEIVSADYMLRVAVSNFRNAWENMDPE---SERVDEYGLGVRESLAEAVSAVI 811
>sp|P87140|COPG_SCHPO Probable coatomer subunit gamma OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec21 PE=1 SV=1
Length = 905
Score = 235 bits (600), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/285 (45%), Positives = 176/285 (61%), Gaps = 51/285 (17%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+D NRSIAT AITTLLKTG++ SVDRLMKQI TF+S+ISD FKI+VV+AIR+LCLKFP
Sbjct: 352 LITDVNRSIATYAITTLLKTGNDESVDRLMKQIVTFMSDISDNFKIIVVDAIRSLCLKFP 411
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
RK ++ FLS +L DEG G E+K + D
Sbjct: 412 RKQDSMLTFLSNILCDEG--------------------------------GYEFKRAAVD 439
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
I +I+ PE+KE LA LCEFIEDCE+ +AVRIL +LG+EGP+A +P+++IR+IYNR
Sbjct: 440 AISDMIKYIPESKERALAELCEFIEDCEYPKIAVRILSILGEEGPKASEPTRFIRYIYNR 499
Query: 181 VILENATVRAAAVTAMAQFG----------------ALCQMDGDDEVRDRATYYHSILAS 224
++LENA VR+AAV+A+ +FG C D DDEVRDRA + S+ A
Sbjct: 500 IMLENAIVRSAAVSALTKFGLNAEDKFVQRSVKVILTRCLEDADDEVRDRAAF--SVKAL 557
Query: 225 QNKQLIQDYIIEPLMVSIPSLERALHAY-NLHPSPTPFDMSSIPL 268
+++ + + S+P+LER+L Y + FD+ S+P+
Sbjct: 558 EDRDAFLPVVKSDKIPSLPALERSLVIYISERKFGQGFDIKSVPV 602
>sp|Q54HL0|COPG_DICDI Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1
SV=1
Length = 898
Score = 226 bits (575), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 179/292 (61%), Gaps = 49/292 (16%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+D+NRSIATLAITTLLK G+ES+V+RL+KQIA F+ +I+DEFKIVVV+AI +L KFP
Sbjct: 329 LITDTNRSIATLAITTLLKVGNESNVERLIKQIANFLGDINDEFKIVVVDAITSLSQKFP 388
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
+K+ L+ FL+ +LRDEG T+QL K + D
Sbjct: 389 KKYKHLIIFLNKILRDEG----------------------TLQL----------KQATLD 416
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
I+T++ PE+KE L LC++IEDC+ L+V+ILHL+G+EGP P++Y+R+IYNR
Sbjct: 417 AILTVVNNIPESKEIALTELCDYIEDCDFPDLSVQILHLIGQEGPLTSSPAQYMRYIYNR 476
Query: 181 VILENATVRAAAVTAMAQFGAL--------------CQMDGDDEVRDRATYYHSILASQN 226
V+L+ +RAAAVT++A+FG L C +D DDEVRDRAT Y + +
Sbjct: 477 VLLDGGIIRAAAVTSIAKFGLLYEPMKEKVVILLQRCLLDEDDEVRDRATLYLKLFKEND 536
Query: 227 KQLIQDYIIEPLMVSIPSLERALHAYNLHPS--PTPFDMSSIPLSTITTSDP 276
+ + +++ + V + +L+++L Y LH PFD++S+ T P
Sbjct: 537 VRYLNKVLMDDVPVPLNNLQKSLELY-LHQGDFSEPFDIASVSTVVETYQSP 587
>sp|P32074|COPG_YEAST Coatomer subunit gamma OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC21 PE=1 SV=2
Length = 935
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 165/289 (57%), Gaps = 55/289 (19%)
Query: 1 MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNR+I+T AITTLLKTG+ ++ L+ I F+ ++SD+FKI++++A+R L L FP
Sbjct: 350 LINDSNRNISTYAITTLLKTGTSKNISSLISTITNFIHDVSDDFKIIIIDAVRTLSLNFP 409
Query: 61 RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD 120
++ ++NFL IDVL S+ G ++K SI +
Sbjct: 410 QEWKSILNFL-------------IDVLKNSE------------------GGFKFKNSIVE 438
Query: 121 TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR 180
+I I+ P++KE L +LC+FIEDCE + VRILHLLGKEGP A PS Y+R IYNR
Sbjct: 439 ALIDIVSFVPQSKELALENLCDFIEDCEFNEILVRILHLLGKEGPSAPNPSLYVRHIYNR 498
Query: 181 VILENATVRAAAVTAMAQFGALCQ-----------------MDGDDEVRDRATY-YHSIL 222
V+LEN+ +R+AAV A+++F AL + D DDEVRDRAT I
Sbjct: 499 VVLENSIIRSAAVVALSKF-ALTKNDPTLYESIISLLKRIANDKDDEVRDRATIALEFID 557
Query: 223 ASQNKQ--LIQDYIIEPLMVSIPSLERALHAY---NLHPSPTPFDMSSI 266
+++NK + Q+ I IPSLE L +Y N T FD++ +
Sbjct: 558 SARNKDDVIAQNLIESKYFYDIPSLESKLSSYISSNTDSFATAFDVNQV 606
>sp|Q82K39|SECA2_STRAW Protein translocase subunit SecA 2 OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=secA2 PE=3 SV=1
Length = 920
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 14 ITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFPRKHA 64
IT + E + R +++IA V+ + +EFK + E ++AL +F R+HA
Sbjct: 9 ITGRIMRAGEGRILRRLQRIAAQVNSLEEEFKALTDEELQALTPEFTRRHA 59
>sp|Q3J7S8|SYL_NITOC Leucine--tRNA ligase OS=Nitrosococcus oceani (strain ATCC 19707 /
NCIMB 11848) GN=leuS PE=3 SV=1
Length = 819
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 99 GVTMQLTVRSTSGLEYKASIADTI-----ITIIEENPEAKETGLAH--LCEFIEDCEHTS 151
G+ +Q V L + DT+ +++ E+P A+E ++ L F+E C+ T+
Sbjct: 229 GIEVQFHVEGKEALAVFTTRPDTLMGVTFVSVAAEHPLAREAATSNPALAAFLEQCQRTA 288
Query: 152 LAVRILHLLGKEG 164
+ IL L KEG
Sbjct: 289 TSEAILETLEKEG 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,360,866
Number of Sequences: 539616
Number of extensions: 5333680
Number of successful extensions: 17459
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 17318
Number of HSP's gapped (non-prelim): 99
length of query: 421
length of database: 191,569,459
effective HSP length: 120
effective length of query: 301
effective length of database: 126,815,539
effective search space: 38171477239
effective search space used: 38171477239
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)