Your job contains 1 sequence.
>psy8503
MISDSNRSIATLAITTLLKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP
RKHAVLMNFLSAMLRDEGVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIAD
TIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNR
VILENATVRAAAVTAMAQFGALCQMDGDDEVRDRATYYHSILASQNKQLIQDYIIEPLMV
SIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTPSGGVASEPTAQATA
RVESYYEKLSAALPEIANLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQLDVHSASGVGLE
DLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASILLPFPRY
C
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8503
(421 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-000208-8 - symbol:copg2 "coatomer protein c... 546 2.9e-90 3
UNIPROTKB|F1SNE9 - symbol:COPG2 "Coatomer subunit gamma" ... 541 5.2e-90 3
UNIPROTKB|A2VE21 - symbol:COPG2 "Coatomer subunit gamma-2... 541 8.4e-90 3
UNIPROTKB|E1C7T8 - symbol:COPG2 "Coatomer subunit gamma" ... 539 1.5e-89 3
UNIPROTKB|Q9UBF2 - symbol:COPG2 "Coatomer subunit gamma-2... 539 1.5e-89 3
MGI|MGI:1858683 - symbol:Copg2 "coatomer protein complex,... 540 2.9e-89 3
UNIPROTKB|F1PHS7 - symbol:COPG2 "Coatomer subunit gamma" ... 535 4.0e-88 3
FB|FBgn0028968 - symbol:gammaCop "gamma-coatomer protein"... 481 5.4e-82 3
WB|WBGene00011775 - symbol:T14G10.5 species:6239 "Caenorh... 440 1.9e-63 2
UNIPROTKB|F1SPF9 - symbol:COPG1 "Uncharacterized protein"... 520 1.1e-60 2
UNIPROTKB|F1NB52 - symbol:COPG "Coatomer subunit gamma" s... 525 3.7e-60 2
UNIPROTKB|P53620 - symbol:COPG1 "Coatomer subunit gamma-1... 522 3.5e-59 2
MGI|MGI:1858696 - symbol:Copg1 "coatomer protein complex,... 517 9.9e-59 2
UNIPROTKB|Q9Y678 - symbol:COPG1 "Coatomer subunit gamma-1... 516 1.0e-58 2
RGD|1566215 - symbol:Copg2 "coatomer protein complex, sub... 321 2.9e-54 2
UNIPROTKB|E2RPG9 - symbol:COPG1 "Coatomer subunit gamma" ... 524 1.1e-49 1
RGD|1565292 - symbol:Copg1 "coatomer protein complex, sub... 517 6.3e-49 1
UNIPROTKB|Q4AEF8 - symbol:Copg1 "Coatomer subunit gamma-1... 517 6.3e-49 1
DICTYBASE|DDB_G0289371 - symbol:copG "adaptin N-terminal ... 298 1.9e-48 3
TAIR|locus:2139479 - symbol:AT4G34450 species:3702 "Arabi... 406 7.4e-44 2
CGD|CAL0001871 - symbol:orf19.759 species:5476 "Candida a... 253 1.0e-31 3
ASPGD|ASPL0000072207 - symbol:AN4547 species:162425 "Emer... 309 5.6e-30 2
POMBASE|SPAC57A7.10c - symbol:sec21 "coatomer gamma subun... 295 1.1e-27 2
SGD|S000005231 - symbol:SEC21 "Gamma subunit of coatomer"... 247 2.2e-17 2
GENEDB_PFALCIPARUM|PF11_0463 - symbol:PF11_0463 "coat pro... 231 4.7e-16 1
UNIPROTKB|Q8IHR6 - symbol:PF11_0463 "Coatomer subunit gam... 231 4.7e-16 1
UNIPROTKB|D4A113 - symbol:D4A113 "Uncharacterized protein... 154 3.5e-08 1
UNIPROTKB|H7C1T7 - symbol:COPG2 "Coatomer subunit gamma-2... 127 1.7e-07 1
UNIPROTKB|H0Y8X7 - symbol:COPG1 "Coatomer subunit gamma-1... 118 4.6e-05 1
>ZFIN|ZDB-GENE-000208-8 [details] [associations]
symbol:copg2 "coatomer protein complex, subunit gamma
2" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 ZFIN:ZDB-GENE-000208-8 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958
EMBL:AF191561 EMBL:AF191562 EMBL:CR749763 EMBL:BX004864
EMBL:BC045918 EMBL:BC096860 IPI:IPI00495942 IPI:IPI00898490
RefSeq:NP_571069.1 UniGene:Dr.75573 HSSP:Q9Y678
ProteinModelPortal:Q9PUE4 SMR:Q9PUE4 STRING:Q9PUE4 PRIDE:Q9PUE4
Ensembl:ENSDART00000043660 GeneID:30187 KEGG:dre:30187
InParanoid:Q7ZVC5 NextBio:20806653 Bgee:Q9PUE4 Uniprot:Q9PUE4
Length = 873
Score = 546 (197.3 bits), Expect = 2.9e-90, Sum P(3) = 2.9e-90
Identities = 128/267 (47%), Positives = 159/267 (59%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEENPE+KETGLAHLCEFIEDCEHT LA +ILHLLGKEGP
Sbjct: 405 LRDDGGFEYKRAIVDCIISIIEENPESKETGLAHLCEFIEDCEHTVLATKILHLLGKEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
R PSKYIRFI+NRV+LE+ +FGA C MD DDEV
Sbjct: 465 RTPTPSKYIRFIFNRVVLESEAVRAAAVSALAKFGAQNDDLLPSVLVLMQRCMMDSDDEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + K L YI L VS+ LE++LH Y L PS PFDM ++PL+T
Sbjct: 525 RDRATFYMNVLQQKQKALNAAYIFNGLSVSVLGLEKSLHQYTLEPSEKPFDMKTVPLATA 584
Query: 272 T-TSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPV 330
T TE+A P + P A +R + Y E+LSA +PE L G LFKS+ PV
Sbjct: 585 PITEHKTEIA-----PVA-TSKLPEKLAPSRQDIYQEQLSA-IPEFQGL-GPLFKSSEPV 636
Query: 331 RRD-------LRSVFHSYAVSMRRQLD 350
+ +R + H++A M Q D
Sbjct: 637 QLTEAETEYVVRCIKHTFANHMIFQFD 663
Score = 283 (104.7 bits), Expect = 2.9e-90, Sum P(3) = 2.9e-90
Identities = 58/91 (63%), Positives = 71/91 (78%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLV 88
RKH+V+MNFLS MLRD+G F R +D ++
Sbjct: 392 RKHSVMMNFLSNMLRDDGGFEYKRAIVDCII 422
Score = 121 (47.7 bits), Expect = 2.9e-90, Sum P(3) = 2.9e-90
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE++++D + KV KPNF A W+E DE E E+TF L+ + ++ EAV +I+
Sbjct: 752 LEDLEVTVADHIQKVLKPNFAAAWDEVG-DEC--EKEETFALATVRTLDEAVNNIV 804
>UNIPROTKB|F1SNE9 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:SEEGHES
EMBL:CU915599 EMBL:FP236769 Ensembl:ENSSSCT00000018023
Uniprot:F1SNE9
Length = 871
Score = 541 (195.5 bits), Expect = 5.2e-90, Sum P(3) = 5.2e-90
Identities = 120/240 (50%), Positives = 146/240 (60%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II I+EENPE+KE GLAHLCEFIEDCEHT LA +ILHLLGKEGP
Sbjct: 405 LRDDGGFEYKRAIVDCIINIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
R PSKYIRFI+NRV+LEN +FGA C MD DDEV
Sbjct: 465 RTPVPSKYIRFIFNRVVLENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDTDDEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + L YI L VS+P +E+ALH Y L PS PFDM SIPL+
Sbjct: 525 RDRATFYLNVLQQRQMALNATYIFNGLTVSVPGMEKALHQYTLEPSEKPFDMKSIPLAMA 584
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR 331
E + VA++P A +R + + E+L AA+PE NL G LFKS+ PV+
Sbjct: 585 PVF---EQKSEITL----VATKPEKLAPSRQDIFQEQL-AAIPEFMNL-GPLFKSSEPVQ 635
Score = 277 (102.6 bits), Expect = 5.2e-90, Sum P(3) = 5.2e-90
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLV 88
RKH+V+M FLS MLRD+G F R +D ++
Sbjct: 392 RKHSVMMTFLSNMLRDDGGFEYKRAIVDCII 422
Score = 130 (50.8 bits), Expect = 5.2e-90, Sum P(3) = 5.2e-90
Identities = 27/56 (48%), Positives = 41/56 (73%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+++SD + KV KPNF A WEE ++ E E+TF LS ++++EAV++I+
Sbjct: 750 LEDLEVTVSDHIQKVLKPNFAAAWEEV--GDTF-EKEETFALSSTKTLEEAVSNII 802
>UNIPROTKB|A2VE21 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9913 "Bos
taurus" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093
EMBL:BC133529 IPI:IPI00688869 RefSeq:NP_001075917.1
UniGene:Bt.22540 ProteinModelPortal:A2VE21 SMR:A2VE21 STRING:A2VE21
PRIDE:A2VE21 Ensembl:ENSBTAT00000022911 GeneID:536616
KEGG:bta:536616 CTD:26958 InParanoid:A2VE21 OMA:SEEGHES
NextBio:20876980 Uniprot:A2VE21
Length = 871
Score = 541 (195.5 bits), Expect = 8.4e-90, Sum P(3) = 8.4e-90
Identities = 120/240 (50%), Positives = 149/240 (62%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II I+EENPE+KE GLAHLCEFIEDCEHT LA +ILHLLGKEGP
Sbjct: 405 LRDDGGFEYKRAIVDCIIHIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
R PSKYIRFI+NRV+LEN +FGA C MD DDEV
Sbjct: 465 RTPVPSKYIRFIFNRVVLENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDTDDEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + L YI L VS+P +E+ALH Y L PS PFDM SIPL+T
Sbjct: 525 RDRATFYLNVLQQRQMALNATYIFNGLTVSVPGMEKALHQYTLEPSEKPFDMKSIPLATA 584
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR 331
+ + A+ V+++P A +R + + E+L AA+PE NL G LFKS+ PV+
Sbjct: 585 PVFE--QKAEITL-----VSTKPEKLAPSRQDIFQEQL-AAIPEFMNL-GPLFKSSEPVQ 635
Score = 277 (102.6 bits), Expect = 8.4e-90, Sum P(3) = 8.4e-90
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLV 88
RKH+V+M FLS MLRD+G F R +D ++
Sbjct: 392 RKHSVMMTFLSNMLRDDGGFEYKRAIVDCII 422
Score = 128 (50.1 bits), Expect = 8.4e-90, Sum P(3) = 8.4e-90
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+++SD + KV KPNF A WEE + E E+TF LS ++++EAV +I+
Sbjct: 750 LEDLEVTVSDHIQKVMKPNFAAAWEEVG---NTFEKEETFALSSTKTLEEAVNNII 802
>UNIPROTKB|E1C7T8 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958
OMA:SEEGHES EMBL:AADN02039801 IPI:IPI00596855 RefSeq:XP_414981.2
Ensembl:ENSGALT00000013228 GeneID:416685 KEGG:gga:416685
NextBio:20820109 Uniprot:E1C7T8
Length = 871
Score = 539 (194.8 bits), Expect = 1.5e-89, Sum P(3) = 1.5e-89
Identities = 118/240 (49%), Positives = 148/240 (61%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEENPE+KE+GLAHLCEFIEDCEHT LA +ILHLLGKEGP
Sbjct: 405 LRDDGGFEYKRAIVDCIISIIEENPESKESGLAHLCEFIEDCEHTVLATKILHLLGKEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
R PSKYIRFI+NRV+LEN +FGA C MD DDEV
Sbjct: 465 RTPSPSKYIRFIFNRVVLENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDSDDEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + L YI L VS+P +E+ALH Y L PS PFDM ++PL+T
Sbjct: 525 RDRATFYLNVLQQRQIALNAAYIFNGLTVSVPGMEKALHQYTLEPSDKPFDMKTVPLATA 584
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR 331
+ + V S+P A +R + + E+L AA+PE +L G LFKS+ PV+
Sbjct: 585 PIFEQ-------KAEISLVTSKPEKVAPSRQDIFQEQL-AAIPEFKSL-GPLFKSSEPVQ 635
Score = 277 (102.6 bits), Expect = 1.5e-89, Sum P(3) = 1.5e-89
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLV 88
RKH+V+M FLS MLRD+G F R +D ++
Sbjct: 392 RKHSVMMTFLSNMLRDDGGFEYKRAIVDCII 422
Score = 128 (50.1 bits), Expect = 1.5e-89, Sum P(3) = 1.5e-89
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+++SD + KV KPNF A WEE D E E+TF L ++++ EAV +I+
Sbjct: 750 LEDLEVTVSDHIQKVLKPNFAAAWEEVGDDF---EKEETFALGSIKTLDEAVNNII 802
Score = 40 (19.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 8/36 (22%), Positives = 19/36 (52%)
Query: 228 QLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDM 263
Q I+ Y+ + ++ +PS+ + +LH +D+
Sbjct: 138 QAIERYMKQAIVDKVPSVSSSALVSSLHMMKISYDV 173
>UNIPROTKB|Q9UBF2 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0006891 EMBL:CH236950
EMBL:CH471070 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 EMBL:AC007938 eggNOG:COG5240
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 CTD:26958 EMBL:AF207598
EMBL:AF157833 EMBL:AB047847 EMBL:AK291409 EMBL:AC090520
EMBL:AC009274 EMBL:BC017443 IPI:IPI00002557 RefSeq:NP_036265.3
UniGene:Hs.6421 ProteinModelPortal:Q9UBF2 SMR:Q9UBF2 IntAct:Q9UBF2
STRING:Q9UBF2 PhosphoSite:Q9UBF2 DMDM:13124090 PaxDb:Q9UBF2
PeptideAtlas:Q9UBF2 PRIDE:Q9UBF2 GeneID:26958 KEGG:hsa:26958
UCSC:uc003vqh.1 GeneCards:GC07M130146 H-InvDB:HIX0201202
HGNC:HGNC:2237 MIM:604355 neXtProt:NX_Q9UBF2 PharmGKB:PA26753
GenomeRNAi:26958 NextBio:49412 CleanEx:HS_COPG2
Genevestigator:Q9UBF2 Uniprot:Q9UBF2
Length = 871
Score = 539 (194.8 bits), Expect = 1.5e-89, Sum P(3) = 1.5e-89
Identities = 119/240 (49%), Positives = 149/240 (62%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+I+EENPE+KE GLAHLCEFIEDCEHT LA +ILHLLGKEGP
Sbjct: 405 LRDDGGFEYKRAIVDCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
R PSKYIRFI+NRV+LEN +FGA C MD DDEV
Sbjct: 465 RTPVPSKYIRFIFNRVVLENEAVRAAAVSALAKFGAQNESLLPSILVLLQRCMMDTDDEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + L YI L VS+P +E+ALH Y L PS PFDM SIPL+
Sbjct: 525 RDRATFYLNVLQQRQMALNATYIFNGLTVSVPGMEKALHQYTLEPSEKPFDMKSIPLAMA 584
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR 331
+ + A+ VA++P A +R + + E+L AA+PE N+ G LFKS+ PV+
Sbjct: 585 PVFE--QKAEITL-----VATKPEKLAPSRQDIFQEQL-AAIPEFLNI-GPLFKSSEPVQ 635
Score = 277 (102.6 bits), Expect = 1.5e-89, Sum P(3) = 1.5e-89
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLV 88
RKH+V+M FLS MLRD+G F R +D ++
Sbjct: 392 RKHSVMMTFLSNMLRDDGGFEYKRAIVDCII 422
Score = 128 (50.1 bits), Expect = 1.5e-89, Sum P(3) = 1.5e-89
Identities = 43/122 (35%), Positives = 65/122 (53%)
Query: 306 YEKLSAA-LPEIA-NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASGV----G 358
YE LS P + N PG + D +V S++ +M+ + D +GV G
Sbjct: 684 YEVLSCIPAPSLPYNQPGICYTLVRLPDDDPTAVAGSFSCTMKFTVRDCDPNTGVPDEDG 743
Query: 359 ------LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVAS 412
LEDLE+++SD + KV KPNF A WEE ++ E E+TF LS ++++EAV +
Sbjct: 744 YDDEYVLEDLEVTVSDHIQKVLKPNFAAAWEEV--GDTF-EKEETFALSSTKTLEEAVNN 800
Query: 413 IL 414
I+
Sbjct: 801 II 802
>MGI|MGI:1858683 [details] [associations]
symbol:Copg2 "coatomer protein complex, subunit gamma 2"
species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 MGI:MGI:1858683 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 eggNOG:COG5240 GeneTree:ENSGT00390000016313
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 CTD:26958 EMBL:AF205065 EMBL:AJ251067
EMBL:AK088492 EMBL:AK149462 EMBL:AK163668 EMBL:BC049178
EMBL:BC145898 EMBL:BC145900 IPI:IPI00316359 IPI:IPI00896643
IPI:IPI00896657 IPI:IPI00896682 RefSeq:NP_059506.1
UniGene:Mm.381860 UniGene:Mm.39896 ProteinModelPortal:Q9QXK3
SMR:Q9QXK3 STRING:Q9QXK3 PhosphoSite:Q9QXK3 PaxDb:Q9QXK3
PRIDE:Q9QXK3 Ensembl:ENSMUST00000048774 Ensembl:ENSMUST00000166192
GeneID:54160 KEGG:mmu:54160 UCSC:uc009bfv.1 UCSC:uc012ejo.1
InParanoid:Q9QXK3 OMA:KETEEGH ChiTaRS:COPG2 NextBio:311000
Bgee:Q9QXK3 CleanEx:MM_COPG2 Genevestigator:Q9QXK3
GermOnline:ENSMUSG00000025607 Uniprot:Q9QXK3
Length = 871
Score = 540 (195.1 bits), Expect = 2.9e-89, Sum P(3) = 2.9e-89
Identities = 122/241 (50%), Positives = 149/241 (61%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+I+EENPE+KE GLAHLCEFIEDCEHT LA +ILHLLGKEGP
Sbjct: 405 LRDDGGFEYKKAIVDCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
R PSKYIRFI+NRV+LEN +FGA C MD DDEV
Sbjct: 465 RTPVPSKYIRFIFNRVVLENEAVRAAAVSALAKFGAQNESLLPSILVLLQRCMMDTDDEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + L YI L VSIP +E+ALH Y L PS PFDM SIPL+
Sbjct: 525 RDRATFYLNVLQQRQMALNATYIFNGLTVSIPGMEKALHQYTLEPSEKPFDMKSIPLAMA 584
Query: 272 TTSDP-TEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPV 330
+ +E+ L TP +P A +R + + E+L AA+PE NL G LFKS+ PV
Sbjct: 585 PVFEQKSEIT--LVTP------KPEKLAPSRQDIFQEQL-AAIPEFMNL-GPLFKSSEPV 634
Query: 331 R 331
+
Sbjct: 635 Q 635
Score = 275 (101.9 bits), Expect = 2.9e-89, Sum P(3) = 2.9e-89
Identities = 55/80 (68%), Positives = 65/80 (81%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCHKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF 80
RKH+V+M FLS MLRD+G F
Sbjct: 392 RKHSVMMTFLSNMLRDDGGF 411
Score = 126 (49.4 bits), Expect = 2.9e-89, Sum P(3) = 2.9e-89
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+++SD + K+ KPNF A WEE ++ E E+TF LS ++++EAV +I+
Sbjct: 750 LEDLEVTVSDHIQKILKPNFAAAWEEV--GDAF-EKEETFALSSTKTLEEAVNNII 802
Score = 100 (40.3 bits), Expect = 8.2e-28, Sum P(2) = 8.2e-28
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRS 108
GV+RGG D+LVRS+LA+ AD GVTMQ+TVRS
Sbjct: 829 GVYRGGYDLLVRSRLAL-AD-GVTMQVTVRS 857
>UNIPROTKB|F1PHS7 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 GeneTree:ENSGT00390000016313
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:SEEGHES EMBL:AAEX03009252 EMBL:AAEX03009250
EMBL:AAEX03009251 Ensembl:ENSCAFT00000002234 Uniprot:F1PHS7
Length = 1010
Score = 535 (193.4 bits), Expect = 4.0e-88, Sum P(3) = 4.0e-88
Identities = 119/240 (49%), Positives = 148/240 (61%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+I+EENPE KE GLAHLCEFIEDCEHT LA +ILHLLGKEGP
Sbjct: 526 LRDDGGFEYKRAIVDCIISIVEENPEGKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGP 585
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
R PSKYIRFI+NRV+LEN +FGA C MD DDEV
Sbjct: 586 RTPVPSKYIRFIFNRVVLENEAVRAAAVSALAKFGAQNENLLPSILVLLQRCMMDTDDEV 645
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + L YI L VS+P +E+ALH Y L PS PFDM SIPL+
Sbjct: 646 RDRATFYLNVLQQRQMALNATYIFNGLTVSVPGMEKALHQYTLEPSEKPFDMKSIPLAMA 705
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR 331
+ + A+ VA++P A +R + + E+L AA+PE +L G LFKS+ PV+
Sbjct: 706 PVFE--QKAEITL-----VATKPEKVAPSRQDIFQEQL-AAIPEFMDL-GPLFKSSEPVQ 756
Score = 277 (102.6 bits), Expect = 4.0e-88, Sum P(3) = 4.0e-88
Identities = 57/91 (62%), Positives = 70/91 (76%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK+VVV+AI ALC K+P
Sbjct: 453 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVVVVQAISALCQKYP 512
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLV 88
RKH+V+M FLS MLRD+G F R +D ++
Sbjct: 513 RKHSVMMTFLSNMLRDDGGFEYKRAIVDCII 543
Score = 127 (49.8 bits), Expect = 4.0e-88, Sum P(3) = 4.0e-88
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+++SD + KV KPNF A WEE ++ E E+TF LS ++++EAV +I+
Sbjct: 871 LEDLEVTVSDHIQKVLKPNFAAAWEEV--GDTF-EKEETFALSSTKTLEEAVNNII 923
>FB|FBgn0028968 [details] [associations]
symbol:gammaCop "gamma-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] [GO:0007424 "open tracheal
system development" evidence=IMP] [GO:0035149 "lumen formation,
open tracheal system" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0035147 "branch fusion, open tracheal system"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0008362 "chitin-based embryonic cuticle biosynthetic process"
evidence=IMP] [GO:0010883 "regulation of lipid storage"
evidence=IDA] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0035158 "regulation of tube diameter, open
tracheal system" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0007436 "larval salivary gland morphogenesis"
evidence=IMP] [GO:0005801 "cis-Golgi network" evidence=IDA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0005783
EMBL:AE014297 GO:GO:0005794 GO:GO:0006886 GO:GO:0006911
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0008362 HOGENOM:HOG000250272
GO:GO:0030198 GO:GO:0009306 GO:GO:0000910 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 GO:GO:0010883
GO:GO:0035147 GO:GO:0005801 GO:GO:0035158 GO:GO:0007436
eggNOG:COG5240 GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE
HSSP:P53620 EMBL:AF191563 EMBL:AY113545 EMBL:BT001628
RefSeq:NP_001163784.1 RefSeq:NP_524608.1 RefSeq:NP_733432.1
UniGene:Dm.1895 ProteinModelPortal:Q8I0G5 SMR:Q8I0G5
MINT:MINT-1018880 STRING:Q8I0G5 PaxDb:Q8I0G5 PRIDE:Q8I0G5
EnsemblMetazoa:FBtr0085794 GeneID:43717 KEGG:dme:Dmel_CG1528
UCSC:CG1528-RB CTD:43717 FlyBase:FBgn0028968 InParanoid:Q8MYW4
PhylomeDB:Q8I0G5 GenomeRNAi:43717 NextBio:835406 Bgee:Q8I0G5
GO:GO:0035149 Uniprot:Q8I0G5
Length = 883
Score = 481 (174.4 bits), Expect = 5.4e-82, Sum P(3) = 5.4e-82
Identities = 120/240 (50%), Positives = 142/240 (59%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R GLEYK SI DTIITIIEEN +AKE+GL+HLCEFIEDCEH SLAVRILHLLGKEGP
Sbjct: 414 LREEGGLEYKTSIVDTIITIIEENADAKESGLSHLCEFIEDCEHVSLAVRILHLLGKEGP 473
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGALC--------------QMDGDDEV 211
A PSKYIRFIYNRVILE+ QFGA C QMD DDEV
Sbjct: 474 FAATPSKYIRFIYNRVILESPIVRAAAVTAMAQFGASCPALLSNILVLLGRCQMDPDDEV 533
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRATYY SIL S+ +L ++YIIE S+ LE++L + T FD+S +P + I
Sbjct: 534 RDRATYYLSILNSERPELYKNYIIERENCSLALLEKSLVEHLNGDVDTRFDISIVPKAAI 593
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVR 331
P D + S S P R E +L A LP I L G + +S AP++
Sbjct: 594 VK--PVIANDVMLVTS----SAPRPPKITREEESAARL-AQLPGIQVL-GPIHRSTAPIQ 645
Score = 274 (101.5 bits), Expect = 5.4e-82, Sum P(3) = 5.4e-82
Identities = 54/78 (69%), Positives = 64/78 (82%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+DSNRS KTG+ESSV+RLMKQI+TFV+EISDEFK+VVV+AI ALC K+P
Sbjct: 341 LITDSNRSVATLAITTLLKTGAESSVERLMKQISTFVAEISDEFKVVVVQAICALCTKYP 400
Query: 61 RKHAVLMNFLSAMLRDEG 78
RKH VLMNFLS MLR+EG
Sbjct: 401 RKHTVLMNFLSGMLREEG 418
Score = 123 (48.4 bits), Expect = 5.4e-82, Sum P(3) = 5.4e-82
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE++++DQ+ K K NF W+ A+++E + + EDTF LS + ++Q+AV +I+
Sbjct: 760 LEDLELTVADQIQKTRKNNFQVSWDAADSEEWL-QAEDTFVLSAVTTLQDAVNTIV 814
Score = 97 (39.2 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 21/32 (65%), Positives = 26/32 (81%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRST 109
G FRGG ++LVR+KLA+S GVT+ LTVRST
Sbjct: 841 GTFRGGAEILVRAKLALSE--GVTLNLTVRST 870
>WB|WBGene00011775 [details] [associations]
symbol:T14G10.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005798 "Golgi-associated vesicle"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006898
GO:GO:0040010 GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0032940
GO:GO:0005198 GO:GO:0040011 GO:GO:0000003 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:Z68880
GeneID:177891 KEGG:cel:CELE_T14G10.5 CTD:177891
RefSeq:NP_001255464.1 ProteinModelPortal:F5GUA3 SMR:F5GUA3
EnsemblMetazoa:T14G10.5c WormBase:T14G10.5c Uniprot:F5GUA3
Length = 885
Score = 440 (159.9 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 123/330 (37%), Positives = 177/330 (53%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+RS +YK +I +TII IIEENP+AK GLAHLCEFIEDCEH +L+ R+LHLLG+E P
Sbjct: 415 LRSDGSYDYKKAIVETIIAIIEENPDAKVAGLAHLCEFIEDCEHDNLSTRVLHLLGREAP 474
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGALCQ--------------MDGDDEV 211
+ PS YIRFIYNRVILE+ +FGA C +D DDEV
Sbjct: 475 KTPNPSSYIRFIYNRVILESTKVRAAAVTALAKFGAQCVDLRPSIQVLLKRCLLDSDDEV 534
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPS-PTPFDMSSIPLST 270
RDRAT+Y +L + LI ++I++ L VS LER++ Y S +PFD+ +P++
Sbjct: 535 RDRATFYLKMLTEAAEGLIHNFILDGLQVSPSGLERSILDYLRSGSYSSPFDLRVVPVTQ 594
Query: 271 ITTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPV 330
S P + +L V E +A +VE Y +L AA+P+ A L G +FKS+ +
Sbjct: 595 QALSQPEKRVPQL------VEEEEKPKAP-KVEPYAAQL-AAIPQFAAL-GPVFKSSTRI 645
Query: 331 RRDLRSVFHSYAVSMRRQLDVHS-ASGVGLE-DLEISLSDQMAKVNKPNFLALWEEAETD 388
L Y V M + H+ A+ + L+ + + +++DQ+ L + E E
Sbjct: 646 A--LTESIAEYTVHMIK----HTFANAMVLQFECKNTMNDQL-------LLDVSVELEDP 692
Query: 389 ESMNEMEDTFCLSKMESIQEAVASILLPFP 418
+ E +T + K+ + A LL FP
Sbjct: 693 DGEWETGNTVQIDKLPYGEVHSAFSLLEFP 722
Score = 243 (90.6 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 48/79 (60%), Positives = 61/79 (77%)
Query: 2 ISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFPR 61
I+D NRS KTG+ESSV+RLM+QIA FV+EISDEFKIVVV+AIR+LC ++PR
Sbjct: 343 ITDPNRSIATLAITTLLKTGAESSVERLMQQIAGFVNEISDEFKIVVVDAIRSLCSRYPR 402
Query: 62 KHAVLMNFLSAMLRDEGVF 80
KH V+M FL+ MLR +G +
Sbjct: 403 KHTVMMPFLAKMLRSDGSY 421
Score = 84 (34.6 bits), Expect = 7.2e-22, Sum P(2) = 7.2e-22
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASI 413
LE++++++SD + V K +F + WE D + E+TF LS +E+I +AV I
Sbjct: 761 LEEVDVNVSDSVQGVAKSSFGSAWEALGDDATR---EETFQLSTVENIPDAVKKI 812
Score = 76 (31.8 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 78 GVFRGGIDVLVRSKLAVSA-DTGVTMQLTVRSTSGLEYKASIADTIITII 126
GVFRGG DVL ++ +AV D + M + ++S L +AD +I+ +
Sbjct: 840 GVFRGGYDVLSKATVAVDPNDNSIAMNIIIKSNEPL-----VADLVISAV 884
>UNIPROTKB|F1SPF9 [details] [associations]
symbol:COPG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 EMBL:CU928115 Ensembl:ENSSSCT00000012713
OMA:LAPAVSX Uniprot:F1SPF9
Length = 467
Score = 520 (188.1 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 122/237 (51%), Positives = 148/237 (62%)
Query: 111 GLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQP 170
G EYK +I D II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP+ P
Sbjct: 3 GFEYKRAIVDCIISIIEENAESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNP 62
Query: 171 SKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEVRDRAT 216
SKYIRFIYNRV+LE+ +FGA C MD D+EVRDRAT
Sbjct: 63 SKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRAT 122
Query: 217 YYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDP 276
+Y ++L + K L YI+ L VSIP LERAL Y L PS PFD+ S+PL+T
Sbjct: 123 FYLNVLEQKQKALNAGYILNGLTVSIPGLERALQQYTLEPSEKPFDLKSVPLAT------ 176
Query: 277 TEMADRLRTPSGGV--ASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAA-PV 330
T MA++ RT S + A +P A R E + E+L AA+PE L G LFKS+ PV
Sbjct: 177 TPMAEQ-RTESTPITAAKQPEKVAATRQEIFQEQL-AAVPEFQGL-GPLFKSSPEPV 230
Score = 119 (46.9 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 37/108 (34%), Positives = 60/108 (55%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASGV----G------LEDLEISL 366
N PGT + A + D +V +++ M+ + D +G G LEDLE+++
Sbjct: 294 NQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTI 353
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+D + KV K NF A W+E DE E E+TF LS +++++EAV +I+
Sbjct: 354 ADHIQKVMKLNFEAAWDEVG-DEF--EKEETFTLSTIKTLEEAVGNIV 398
>UNIPROTKB|F1NB52 [details] [associations]
symbol:COPG "Coatomer subunit gamma" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:AADN02014051
EMBL:AADN02014052 IPI:IPI00571269 PRIDE:F1NB52
Ensembl:ENSGALT00000009434 Uniprot:F1NB52
Length = 874
Score = 525 (189.9 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 120/240 (50%), Positives = 145/240 (60%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP
Sbjct: 405 LREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
+ PSKYIRFIYNRV+LE+ +FGA C MD D+EV
Sbjct: 465 KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + K L YI+ L VSIP LERALH Y L PS PFD+ S+PL+T
Sbjct: 525 RDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLERALHQYTLEPSEKPFDLKSVPLATA 584
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAA-PV 330
P + R VA +P A R E + E+L A +PE L G LFKS+ PV
Sbjct: 585 ----PI-IEQRAENAPVAVAKQPEKVAATRQEIFQEQLGA-IPEFRGL-GPLFKSSPEPV 637
Score = 288 (106.4 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 74/194 (38%), Positives = 111/194 (57%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRS KTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAINALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLVR--SKLAVSADTGVTMQLTVRSTSGLEYK 115
RKHAVLMNFL MLR+EG F R +D ++ + + S +TG++ E+
Sbjct: 392 RKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSH--LCEFIEDCEFT 449
Query: 116 ASIADTIITII-EENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPS 171
+A I+ ++ +E P K + FI + EH + + L K G + ++
Sbjct: 450 V-LATRILHLLGQEGP--KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEML 506
Query: 172 KYIRFIYNRVILEN 185
I + R ++++
Sbjct: 507 PSILVLLKRCVMDD 520
Score = 122 (48.0 bits), Expect = 3.7e-60, Sum P(2) = 3.7e-60
Identities = 26/56 (46%), Positives = 42/56 (75%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE++++D + +V KPNF A W+E DE E E+TF LS +++++EAV++I+
Sbjct: 753 LEDLEVTVADHIQRVLKPNFGAAWDEVG-DEY--EKEETFTLSAIKTLEEAVSNIV 805
Score = 50 (22.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 205 MDG-DDEVRDRATY-YHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFD 262
M G DD R A I S Q I+ Y+ + ++ +PS+ + +LH T FD
Sbjct: 113 MTGKDDNYRGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKTSFD 172
Query: 263 M 263
+
Sbjct: 173 V 173
>UNIPROTKB|P53620 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9913 "Bos
taurus" [GO:0006890 "retrograde vesicle-mediated transport, Golgi
to ER" evidence=TAS] [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0030126 "COPI vesicle coat"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
GO:GO:0006891 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 PDB:3TJZ PDBsum:3TJZ EMBL:X92987
EMBL:BC111322 EMBL:X70019 IPI:IPI00717350 PIR:S33957
RefSeq:NP_001032904.1 UniGene:Bt.65158 PDB:1PZD PDBsum:1PZD
ProteinModelPortal:P53620 SMR:P53620 DIP:DIP-739N STRING:P53620
Ensembl:ENSBTAT00000017588 GeneID:338055 KEGG:bta:338055 CTD:22820
eggNOG:COG5240 GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 InParanoid:P53620 OrthoDB:EOG4DZ1TM
EvolutionaryTrace:P53620 NextBio:20812506 Gene3D:2.60.40.1480
InterPro:IPR017106 PANTHER:PTHR10261 PIRSF:PIRSF037093
Uniprot:P53620
Length = 874
Score = 522 (188.8 bits), Expect = 3.5e-59, Sum P(2) = 3.5e-59
Identities = 124/242 (51%), Positives = 150/242 (61%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP
Sbjct: 405 LREEGGFEYKRAIVDCIISIIEENAESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
R PSKYIRFIYNRV+LE+ +FGA C MD D+EV
Sbjct: 465 RTSNPSKYIRFIYNRVVLEHAEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + K L YI+ L VSIP LERAL Y L PS PFD+ S+PL+T
Sbjct: 525 RDRATFYLNVLEQKQKALNAGYILNGLAVSIPGLERALQQYTLEPSEKPFDLKSVPLATA 584
Query: 272 TTSDPTEMADRLRTPSGGV--ASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAA- 328
P +A++ RT S V A +P A R E + E+L AA+PE L G LFKS+
Sbjct: 585 ----P--LAEQ-RTESTPVTAAKQPEKVAATRQEIFQEQL-AAVPEFQGL-GPLFKSSPE 635
Query: 329 PV 330
PV
Sbjct: 636 PV 637
Score = 283 (104.7 bits), Expect = 8.2e-31, Sum P(2) = 8.2e-31
Identities = 72/194 (37%), Positives = 110/194 (56%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++D+NRS KTGSE S+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDANRSIATLAITTLLKTGSEGSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLVR--SKLAVSADTGVTMQLTVRSTSGLEYK 115
RKHAVLMNFL +MLR+EG F R +D ++ + A S +TG++ E+
Sbjct: 392 RKHAVLMNFLFSMLREEGGFEYKRAIVDCIISIIEENAESKETGLSH--LCEFIEDCEFT 449
Query: 116 ASIADTIITII-EENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPS 171
+A I+ ++ +E P + FI + EH + + L K G + ++
Sbjct: 450 V-LATRILHLLGQEGPRTSNP--SKYIRFIYNRVVLEHAEVRAGAVSALAKFGAQNEEML 506
Query: 172 KYIRFIYNRVILEN 185
I + R ++++
Sbjct: 507 PSILVLLKRCVMDD 520
Score = 116 (45.9 bits), Expect = 3.5e-59, Sum P(2) = 3.5e-59
Identities = 35/108 (32%), Positives = 59/108 (54%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASGVG----------LEDLEISL 366
N PGT + A + D +V +++ M+ + D +G LEDLE+++
Sbjct: 701 NQPGTCYTLVALPKEDPTAVACTFSCVMKFTVKDCDPTTGEADDEGYEDEYVLEDLEVTI 760
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+D + KV K NF A W+E DE + E+TF LS +++++EAV +I+
Sbjct: 761 ADHIQKVMKLNFEAAWDEVG-DEF--QKEETFTLSTIKTLEEAVGNIV 805
>MGI|MGI:1858696 [details] [associations]
symbol:Copg1 "coatomer protein complex, subunit gamma 1"
species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005798 "Golgi-associated
vesicle" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0051683 "establishment of Golgi localization"
evidence=ISO] [GO:0072384 "organelle transport along microtubule"
evidence=ISO] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
MGI:MGI:1858696 GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 eggNOG:COG5240 GeneTree:ENSGT00390000016313
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:WDEVGEE ChiTaRS:COPG1 EMBL:AF187079
EMBL:AK049417 EMBL:AK077461 EMBL:AK147895 EMBL:AK151284
EMBL:AK151816 EMBL:AK153142 EMBL:AK164280 EMBL:AK169256
EMBL:AK171950 EMBL:AK172519 EMBL:BC008553 EMBL:BC024686
EMBL:BC024896 IPI:IPI00223437 RefSeq:NP_059505.1 UniGene:Mm.258785
HSSP:P53620 ProteinModelPortal:Q9QZE5 SMR:Q9QZE5 STRING:Q9QZE5
PhosphoSite:Q9QZE5 PaxDb:Q9QZE5 PRIDE:Q9QZE5
Ensembl:ENSMUST00000113607 GeneID:54161 KEGG:mmu:54161
UCSC:uc009cug.1 CTD:54161 InParanoid:Q922C6 NextBio:311004
Bgee:Q9QZE5 CleanEx:MM_COPG Genevestigator:Q9QZE5 Uniprot:Q9QZE5
Length = 874
Score = 517 (187.1 bits), Expect = 9.9e-59, Sum P(2) = 9.9e-59
Identities = 119/241 (49%), Positives = 147/241 (60%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP
Sbjct: 405 LREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
+ PSKYIRFIYNRV+LE+ +FGA C MD D+EV
Sbjct: 465 KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + K L YI+ L VSIP LE+AL Y L PS PFD+ S+PL+T
Sbjct: 525 RDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLEKALQQYTLEPSEKPFDLKSVPLAT- 583
Query: 272 TTSDPTEMAD-RLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAA-P 329
T MA+ R + + +P A R E + E+L AA+PE L G LFKS+ P
Sbjct: 584 -----TPMAEQRPESTATAAVKQPEKVAATRQEIFQEQL-AAVPEFQGL-GPLFKSSPEP 636
Query: 330 V 330
V
Sbjct: 637 V 637
Score = 287 (106.1 bits), Expect = 8.7e-32, Sum P(2) = 8.7e-32
Identities = 74/194 (38%), Positives = 111/194 (57%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRS KTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLVR--SKLAVSADTGVTMQLTVRSTSGLEYK 115
RKHAVLMNFL MLR+EG F R +D ++ + + S +TG++ E+
Sbjct: 392 RKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSH--LCEFIEDCEFT 449
Query: 116 ASIADTIITII-EENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPS 171
+A I+ ++ +E P K + FI + EH + + L K G + ++
Sbjct: 450 V-LATRILHLLGQEGP--KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEML 506
Query: 172 KYIRFIYNRVILEN 185
I + R ++++
Sbjct: 507 PSILVLLKRCVMDD 520
Score = 117 (46.2 bits), Expect = 9.9e-59, Sum P(2) = 9.9e-59
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE++++D + KV K NF A W+E DE E E+TF LS +++++EAV +I+
Sbjct: 753 LEDLEVTVADHIQKVMKVNFEAAWDEVG-DEF--EKEETFTLSTIKTLEEAVGNIV 805
>UNIPROTKB|Q9Y678 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0051683 "establishment of Golgi
localization" evidence=ISS] [GO:0072384 "organelle transport along
microtubule" evidence=ISS] [GO:0000139 "Golgi membrane"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 GO:GO:0005829 GO:GO:0005634 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 EMBL:CH471052 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 GO:GO:0048205
GO:GO:0006890 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
HOGENOM:HOG000184434 HOVERGEN:HBG004368 OrthoDB:EOG4DZ1TM
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AB047846 EMBL:AF100756 EMBL:AK001724
EMBL:AK291693 EMBL:BC066650 IPI:IPI00783982 RefSeq:NP_057212.1
UniGene:Hs.518250 PDB:1R4X PDBsum:1R4X ProteinModelPortal:Q9Y678
SMR:Q9Y678 DIP:DIP-29872N IntAct:Q9Y678 MINT:MINT-4657598
STRING:Q9Y678 PhosphoSite:Q9Y678 DMDM:12229771 PaxDb:Q9Y678
PeptideAtlas:Q9Y678 PRIDE:Q9Y678 Ensembl:ENST00000314797
GeneID:22820 KEGG:hsa:22820 UCSC:uc003els.3 GeneCards:GC03P128969
HGNC:HGNC:2236 HPA:HPA037867 neXtProt:NX_Q9Y678 PharmGKB:PA26752
InParanoid:Q9Y678 OMA:WDEVGEE ChiTaRS:COPG1
EvolutionaryTrace:Q9Y678 GenomeRNAi:22820 NextBio:43212
ArrayExpress:Q9Y678 Bgee:Q9Y678 CleanEx:HS_COPG
Genevestigator:Q9Y678 GermOnline:ENSG00000181789 Uniprot:Q9Y678
Length = 874
Score = 516 (186.7 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 121/241 (50%), Positives = 147/241 (60%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP
Sbjct: 405 LREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
+ PSKYIRFIYNRV+LE+ +FGA C MD D+EV
Sbjct: 465 KTTNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + K L YI+ L VSIP LERAL Y L PS PFD+ S+PL+T
Sbjct: 525 RDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLERALQQYTLEPSEKPFDLKSVPLATA 584
Query: 272 TTSDP-TEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAA-P 329
++ TE TP V +P A R E + E+L AA+PE L G LFKS+ P
Sbjct: 585 PMAEQRTES-----TPITAV-KQPEKVAATRQEIFQEQL-AAVPEFRGL-GPLFKSSPEP 636
Query: 330 V 330
V
Sbjct: 637 V 637
Score = 292 (107.8 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 75/194 (38%), Positives = 112/194 (57%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRS KTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLVR--SKLAVSADTGVTMQLTVRSTSGLEYK 115
RKHAVLMNFL MLR+EG F R +D ++ + + S +TG++ E+
Sbjct: 392 RKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSH--LCEFIEDCEFT 449
Query: 116 ASIADTIITII-EENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPS 171
+A I+ ++ +E P K T + FI + EH + + L K G + ++
Sbjct: 450 V-LATRILHLLGQEGP--KTTNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEML 506
Query: 172 KYIRFIYNRVILEN 185
I + R ++++
Sbjct: 507 PSILVLLKRCVMDD 520
Score = 118 (46.6 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 37/108 (34%), Positives = 60/108 (55%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASGV----G------LEDLEISL 366
N PGT + A + D +V +++ M+ + D +G G LEDLE+++
Sbjct: 701 NQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTV 760
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+D + KV K NF A W+E DE E E+TF LS +++++EAV +I+
Sbjct: 761 ADHIQKVMKLNFEAAWDEVG-DEF--EKEETFTLSTIKTLEEAVGNIV 805
>RGD|1566215 [details] [associations]
symbol:Copg2 "coatomer protein complex, subunit gamma 2"
species:10116 "Rattus norvegicus" [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 RGD:1566215
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GeneTree:ENSGT00390000016313
InterPro:IPR017106 PANTHER:PTHR10261 IPI:IPI00767794
Ensembl:ENSRNOT00000033706 UCSC:RGD:1566215 OrthoDB:EOG4CG093
ArrayExpress:D4ABY2 Uniprot:D4ABY2
Length = 490
Score = 321 (118.1 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 59/80 (73%), Positives = 67/80 (83%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+I+EENPE+KE GLAHLCEFIEDCEHT LA +ILHLLGKEGP
Sbjct: 406 LRDDGGFEYKKAIVDCIISIVEENPESKEAGLAHLCEFIEDCEHTVLATKILHLLGKEGP 465
Query: 166 RAKQPSKYIRFIYNRVILEN 185
R PSKYIRFI+NRV+LEN
Sbjct: 466 RTPVPSKYIRFIFNRVVLEN 485
Score = 261 (96.9 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 54/81 (66%), Positives = 64/81 (79%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIV-VVEAIRALCLKF 59
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK+ VV+AI ALC K+
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKVSGVVQAISALCQKY 391
Query: 60 PRKHAVLMNFLSAMLRDEGVF 80
PRKH+V+M FLS MLRD+G F
Sbjct: 392 PRKHSVMMTFLSNMLRDDGGF 412
>UNIPROTKB|E2RPG9 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 CTD:22820 GeneTree:ENSGT00390000016313
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:AAEX03012021 RefSeq:XP_533723.2
Ensembl:ENSCAFT00000006920 GeneID:476517 KEGG:cfa:476517
Uniprot:E2RPG9
Length = 874
Score = 524 (189.5 bits), Expect = 1.1e-49, P = 1.1e-49
Identities = 123/242 (50%), Positives = 150/242 (61%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP
Sbjct: 405 LREEGGFEYKRAIVDCIISIIEENTESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
+ PSKYIRFIYNRV+LE+ +FGA C MD D+EV
Sbjct: 465 KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + K L YI+ L VSIP LERAL Y L PS PFD+ S+PL+T
Sbjct: 525 RDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLERALQQYTLEPSEKPFDLKSVPLAT- 583
Query: 272 TTSDPTEMADRLRTPSGGV--ASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAA- 328
T MA++ RT S + A +P A R E + E+L AA+PE L G LFKS+
Sbjct: 584 -----TPMAEQ-RTESTPITAAKQPEKVAATRQEIFQEQL-AAVPEFHGL-GPLFKSSPE 635
Query: 329 PV 330
PV
Sbjct: 636 PV 637
Score = 286 (105.7 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 74/194 (38%), Positives = 110/194 (56%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRS KTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLVR--SKLAVSADTGVTMQLTVRSTSGLEYK 115
RKHAVLMNFL MLR+EG F R +D ++ + S +TG++ E+
Sbjct: 392 RKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENTESKETGLSH--LCEFIEDCEFT 449
Query: 116 ASIADTIITII-EENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPS 171
+A I+ ++ +E P K + FI + EH + + L K G + ++
Sbjct: 450 V-LATRILHLLGQEGP--KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEML 506
Query: 172 KYIRFIYNRVILEN 185
I + R ++++
Sbjct: 507 PSILVLLKRCVMDD 520
Score = 120 (47.3 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 47/136 (34%), Positives = 70/136 (51%)
Query: 290 VASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL 349
V EPT V SY S LP N PGT + + + D +V +++ M+ +
Sbjct: 679 VQMEPTE--AYEVVSYVPARS--LPY--NQPGTCYTLVSLPKEDPTAVACTFSCMMKFTV 732
Query: 350 -DVHSASGV----G------LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTF 398
D +G G LEDLEI+++D + KV K NF A W+E DE E E+TF
Sbjct: 733 KDCDPTTGETDDEGYEDEYVLEDLEITVADHIQKVMKLNFEAAWDEVG-DEF--EKEETF 789
Query: 399 CLSKMESIQEAVASIL 414
LS +++++EAV +I+
Sbjct: 790 TLSTIKTLEEAVGNIV 805
>RGD|1565292 [details] [associations]
symbol:Copg1 "coatomer protein complex, subunit gamma 1"
species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0051683 "establishment of Golgi localization" evidence=IMP]
[GO:0072384 "organelle transport along microtubule" evidence=IMP]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 RGD:1565292
GO:GO:0005634 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 EMBL:AB158425 EMBL:AB158426
EMBL:BC129074 IPI:IPI00364504 RefSeq:NP_001026992.1
UniGene:Rn.50150 ProteinModelPortal:Q4AEF8 SMR:Q4AEF8 IntAct:Q4AEF8
STRING:Q4AEF8 PRIDE:Q4AEF8 Ensembl:ENSRNOT00000016137 GeneID:297428
KEGG:rno:297428 InParanoid:Q4AEF8 NextBio:642245
ArrayExpress:Q4AEF8 Genevestigator:Q4AEF8 Uniprot:Q4AEF8
Length = 874
Score = 517 (187.1 bits), Expect = 6.3e-49, P = 6.3e-49
Identities = 119/240 (49%), Positives = 146/240 (60%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP
Sbjct: 405 LREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
+ PSKYIRFIYNRV+LE+ +FGA C MD D+EV
Sbjct: 465 KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + K L YI+ L VSIP LE+AL Y L PS PFD+ S+PL+T
Sbjct: 525 RDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLEKALQQYTLEPSEKPFDLKSVPLAT- 583
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAA-PV 330
+ TE R + S +P A R E + E+L AA+PE L G LFKS+ PV
Sbjct: 584 --TPMTEQ--RPESTSTAAVKQPEKVAATRQEIFQEQL-AAVPEFQGL-GPLFKSSPEPV 637
Score = 287 (106.1 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 74/194 (38%), Positives = 111/194 (57%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRS KTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLVR--SKLAVSADTGVTMQLTVRSTSGLEYK 115
RKHAVLMNFL MLR+EG F R +D ++ + + S +TG++ E+
Sbjct: 392 RKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSH--LCEFIEDCEFT 449
Query: 116 ASIADTIITII-EENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPS 171
+A I+ ++ +E P K + FI + EH + + L K G + ++
Sbjct: 450 V-LATRILHLLGQEGP--KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEML 506
Query: 172 KYIRFIYNRVILEN 185
I + R ++++
Sbjct: 507 PSILVLLKRCVMDD 520
Score = 119 (46.9 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 46/136 (33%), Positives = 70/136 (51%)
Query: 290 VASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVRRDLRSVFHSYAVSMR--- 346
V EPT V SY S LP N PGT + A + D +V +++ M+
Sbjct: 679 VQMEPTE--AYEVLSYVPVRS--LPY--NQPGTCYTLVALPKEDPTAVACTFSCVMKFTV 732
Query: 347 RQLDVHSAS----GVG----LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTF 398
+ D ++ G LEDLE++++D + KV K NF A W+E DE E E+TF
Sbjct: 733 KDCDPNTGEIDEEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVG-DEF--EKEETF 789
Query: 399 CLSKMESIQEAVASIL 414
LS +++++EAV +I+
Sbjct: 790 TLSTIKTLEEAVGNIV 805
>UNIPROTKB|Q4AEF8 [details] [associations]
symbol:Copg1 "Coatomer subunit gamma-1" species:10116
"Rattus norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 RGD:1565292
GO:GO:0005634 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0051683 GO:GO:0072384 CTD:22820 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
HOVERGEN:HBG004368 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 EMBL:AB158425 EMBL:AB158426
EMBL:BC129074 IPI:IPI00364504 RefSeq:NP_001026992.1
UniGene:Rn.50150 ProteinModelPortal:Q4AEF8 SMR:Q4AEF8 IntAct:Q4AEF8
STRING:Q4AEF8 PRIDE:Q4AEF8 Ensembl:ENSRNOT00000016137 GeneID:297428
KEGG:rno:297428 InParanoid:Q4AEF8 NextBio:642245
ArrayExpress:Q4AEF8 Genevestigator:Q4AEF8 Uniprot:Q4AEF8
Length = 874
Score = 517 (187.1 bits), Expect = 6.3e-49, P = 6.3e-49
Identities = 119/240 (49%), Positives = 146/240 (60%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R G EYK +I D II+IIEEN E+KETGL+HLCEFIEDCE T LA RILHLLG+EGP
Sbjct: 405 LREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGP 464
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
+ PSKYIRFIYNRV+LE+ +FGA C MD D+EV
Sbjct: 465 KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEV 524
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTI 271
RDRAT+Y ++L + K L YI+ L VSIP LE+AL Y L PS PFD+ S+PL+T
Sbjct: 525 RDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLEKALQQYTLEPSEKPFDLKSVPLAT- 583
Query: 272 TTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAA-PV 330
+ TE R + S +P A R E + E+L AA+PE L G LFKS+ PV
Sbjct: 584 --TPMTEQ--RPESTSTAAVKQPEKVAATRQEIFQEQL-AAVPEFQGL-GPLFKSSPEPV 637
Score = 287 (106.1 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 74/194 (38%), Positives = 111/194 (57%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+++DSNRS KTGSESS+DRLMKQI++F+SEISDEFK+VVV+AI ALC K+P
Sbjct: 332 LVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYP 391
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLVR--SKLAVSADTGVTMQLTVRSTSGLEYK 115
RKHAVLMNFL MLR+EG F R +D ++ + + S +TG++ E+
Sbjct: 392 RKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSH--LCEFIEDCEFT 449
Query: 116 ASIADTIITII-EENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPS 171
+A I+ ++ +E P K + FI + EH + + L K G + ++
Sbjct: 450 V-LATRILHLLGQEGP--KTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEML 506
Query: 172 KYIRFIYNRVILEN 185
I + R ++++
Sbjct: 507 PSILVLLKRCVMDD 520
Score = 119 (46.9 bits), Expect = 5.4e-32, Sum P(2) = 5.4e-32
Identities = 46/136 (33%), Positives = 70/136 (51%)
Query: 290 VASEPTAQATARVESYYEKLSAALPEIANLPGTLFKSAAPVRRDLRSVFHSYAVSMR--- 346
V EPT V SY S LP N PGT + A + D +V +++ M+
Sbjct: 679 VQMEPTE--AYEVLSYVPVRS--LPY--NQPGTCYTLVALPKEDPTAVACTFSCVMKFTV 732
Query: 347 RQLDVHSAS----GVG----LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTF 398
+ D ++ G LEDLE++++D + KV K NF A W+E DE E E+TF
Sbjct: 733 KDCDPNTGEIDEEGYEDEYVLEDLEVTVADHIQKVMKVNFEAAWDEVG-DEF--EKEETF 789
Query: 399 CLSKMESIQEAVASIL 414
LS +++++EAV +I+
Sbjct: 790 TLSTIKTLEEAVGNIV 805
>DICTYBASE|DDB_G0289371 [details] [associations]
symbol:copG "adaptin N-terminal domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI
vesicle coat" evidence=IEA;ISS] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005798 "Golgi-associated vesicle" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030663
"COPI-coated vesicle membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
dictyBase:DDB_G0289371 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
GenomeReviews:CM000154_GR EMBL:AAFI02000139 GO:GO:0006891
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
eggNOG:COG5240 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 HSSP:P53620 RefSeq:XP_636291.1
ProteinModelPortal:Q54HL0 IntAct:Q54HL0 STRING:Q54HL0 PRIDE:Q54HL0
EnsemblProtists:DDB0233801 GeneID:8627109 KEGG:ddi:DDB_G0289371
OMA:EMSSISE ProtClustDB:CLSZ2429791 Uniprot:Q54HL0
Length = 898
Score = 298 (110.0 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 68/215 (31%), Positives = 114/215 (53%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R L+ K + D I+T++ PE+KE L LC++IEDC+ L+V+ILHL+G+EGP
Sbjct: 402 LRDEGTLQLKQATLDAILTVVNNIPESKEIALTELCDYIEDCDFPDLSVQILHLIGQEGP 461
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL--------------CQMDGDDEV 211
P++Y+R+IYNRV+L+ +FG L C +D DDEV
Sbjct: 462 LTSSPAQYMRYIYNRVLLDGGIIRAAAVTSIAKFGLLYEPMKEKVVILLQRCLLDEDDEV 521
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSP--TPFDMSSIPLS 269
RDRAT Y + + + + +++ + V + +L+++L Y LH PFD++S+ S
Sbjct: 522 RDRATLYLKLFKENDVRYLNKVLMDDVPVPLNNLQKSLELY-LHQGDFSEPFDIASV--S 578
Query: 270 TITTSDPTEMADRLRTPSGGVASEPTAQATARVES 304
T+ + + + ++P AS+ T +S
Sbjct: 579 TVVETYQSPLLGDGKSPFSTGASKKGDSVTGTPKS 613
Score = 206 (77.6 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+D+NRS K G+ES+V+RL+KQIA F+ +I+DEFKIVVV+AI +L KFP
Sbjct: 329 LITDTNRSIATLAITTLLKVGNESNVERLIKQIANFLGDINDEFKIVVVDAITSLSQKFP 388
Query: 61 RKHAVLMNFLSAMLRDEGVFR 81
+K+ L+ FL+ +LRDEG +
Sbjct: 389 KKYKHLIIFLNKILRDEGTLQ 409
Score = 63 (27.2 bits), Expect = 1.9e-48, Sum P(3) = 1.9e-48
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LE LEI D + + NF W++ D ++ TF L ++SI EAV I+
Sbjct: 772 LERLEIVPKDFLNRAFVGNFSEEWKKMSED---TQLVQTFSLVGVKSIDEAVKQII 824
Score = 37 (18.1 bits), Expect = 7.3e-31, Sum P(3) = 7.3e-31
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 33 IATFVSEISDEFKIVVVEAIRALC 56
I++ ++S + ++ AIR LC
Sbjct: 104 ISSLTKDMSHKIELYRANAIRILC 127
>TAIR|locus:2139479 [details] [associations]
symbol:AT4G34450 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005798 "Golgi-associated
vesicle" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0009507
GO:GO:0006886 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 EMBL:AL161585
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
EMBL:AL023094 eggNOG:COG5240 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AK221839 EMBL:AK226533 IPI:IPI00537691
PIR:T05265 RefSeq:NP_195171.2 UniGene:At.25572
ProteinModelPortal:Q0WW26 SMR:Q0WW26 IntAct:Q0WW26 STRING:Q0WW26
PaxDb:Q0WW26 PRIDE:Q0WW26 ProMEX:Q0WW26 EnsemblPlants:AT4G34450.1
GeneID:829596 KEGG:ath:AT4G34450 TAIR:At4g34450 InParanoid:Q0WW26
OMA:DESIFAN PhylomeDB:Q0WW26 ProtClustDB:CLSN2681006
Genevestigator:Q0WW26 Uniprot:Q0WW26
Length = 886
Score = 406 (148.0 bits), Expect = 7.4e-44, Sum P(2) = 7.4e-44
Identities = 124/342 (36%), Positives = 174/342 (50%)
Query: 38 SEISDEFKIVVVEAIRALCLKFPRKHAV--LM----NFLSAMLRDEGVFRGGIDVLVRS- 90
S ISD+ + + AI L LK + +V LM NF+S + DE F+ + +RS
Sbjct: 336 SLISDQNRSIATLAITTL-LKTGNESSVERLMKQITNFMSD-IADE--FKIVVVDAIRSL 391
Query: 91 --KLAVSADTGVTMQLTV-RSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDC 147
K + + +T + R G EYK +I D+I+TII + P+AKE+GL HLCEFIEDC
Sbjct: 392 CVKFPLKYRSLMTFLSNILREEGGFEYKRAIVDSIVTIIRDIPDAKESGLLHLCEFIEDC 451
Query: 148 EHTSLAVRILHLLGKEGPRAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGAL----- 202
E T L+ +ILH LG EGP PSKYIR+IYNRV LEN +FG +
Sbjct: 452 EFTYLSTQILHFLGIEGPNTSDPSKYIRYIYNRVHLENATVRAAAVSTLAKFGFMVESLK 511
Query: 203 ---------CQMDGDDEVRDRATYYHSILASQNKQLIQDYIIEPLMVS--IPSLERALHA 251
C D DDEVRDRAT Y S+L + L S +P +
Sbjct: 512 PRITVLLKRCIYDSDDEVRDRATLYLSVLGGDGTVDTDKESKDFLFGSLEVPLVNMETSL 571
Query: 252 YNLHPSPTPFDMSSIPLSTITTSDPTEMADRLRTPSGGVASEPTAQATARVESYYEKLSA 311
N PS FD++S+P + + E + + P+G + + P A A+ YE+L +
Sbjct: 572 KNYEPSEEAFDINSVP-KEVKSQPLAEKKAQGKKPTG-LGAPPAAPASGF--DGYERLLS 627
Query: 312 ALPEIANLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVH 352
++PE A G LFKS+ PV +L YAV++ + + D H
Sbjct: 628 SIPEFAAF-GKLFKSSLPV--ELTEAETEYAVNVVKHIFDSH 666
Score = 244 (91.0 bits), Expect = 8.0e-23, Sum P(2) = 8.0e-23
Identities = 52/91 (57%), Positives = 66/91 (72%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+ISD NRS KTG+ESSV+RLMKQI F+S+I+DEFKIVVV+AIR+LC+KFP
Sbjct: 337 LISDQNRSIATLAITTLLKTGNESSVERLMKQITNFMSDIADEFKIVVVDAIRSLCVKFP 396
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLV 88
K+ LM FLS +LR+EG F R +D +V
Sbjct: 397 LKYRSLMTFLSNILREEGGFEYKRAIVDSIV 427
Score = 92 (37.4 bits), Expect = 7.4e-44, Sum P(2) = 7.4e-44
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+ D M KV NF WE + ++ E D + L + ES+ EAV +++
Sbjct: 761 LEDLEVVAGDYMVKVGVSNFRNAWESMDEED---ERVDEYGLGQRESLGEAVKAVM 813
Score = 67 (28.6 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 78 GVFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIADTIITII 126
GV+ G + VLVR++ + + + M+LTVR+ S+A+ I I+
Sbjct: 840 GVYIGNVKVLVRAQFGMDSSKDIAMKLTVRAED-----VSVAEAIHEIV 883
>CGD|CAL0001871 [details] [associations]
symbol:orf19.759 species:5476 "Candida albicans" [GO:0005768
"endosome" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
InterPro:IPR002553 InterPro:IPR013040 InterPro:IPR014863
InterPro:IPR015873 InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752
InterPro:IPR013041 CGD:CAL0001871 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 eggNOG:COG5240
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AACQ01000123 EMBL:AACQ01000122
RefSeq:XP_713569.1 RefSeq:XP_713604.1 ProteinModelPortal:Q59VH4
STRING:Q59VH4 GeneID:3644738 GeneID:3644786 KEGG:cal:CaO19.759
KEGG:cal:CaO19.8379 Uniprot:Q59VH4
Length = 936
Score = 253 (94.1 bits), Expect = 1.0e-31, Sum P(3) = 1.0e-31
Identities = 70/180 (38%), Positives = 90/180 (50%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEA--KETGLAHLCEFIEDCEHTSLAVRILHLLGKE 163
+R LE K+SI D + +I+ P+A K+ L +LCEFIEDCE T L+VRILHLLG E
Sbjct: 438 LRDDGTLELKSSIVDALFDLIKFLPDANAKQLILMNLCEFIEDCEFTELSVRILHLLGDE 497
Query: 164 GPRAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGALCQ---------------MDGD 208
GP PS YIR IYNR++LEN +F A+C D D
Sbjct: 498 GPHTSNPSYYIRHIYNRLVLENSIVRSSAVIALAKFAAVCGGEVSKNIVILLERCLNDVD 557
Query: 209 DEVRDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAY--NLHPSPTPFDMSSI 266
DEVRDRA + + + K LI + + +LE L Y N FD+S I
Sbjct: 558 DEVRDRAAISLNFINNGKKNLI----VSDSKYDLNALESKLVHYLNNEENFSVKFDISEI 613
Score = 160 (61.4 bits), Expect = 1.0e-31, Sum P(3) = 1.0e-31
Identities = 37/88 (42%), Positives = 55/88 (62%)
Query: 1 MISDSNRSXXXXXXXXXXKT--------GSES--SVDRLMKQIATFVSEISDEFKIVVVE 50
+I+D+NRS KT GS SVDRL+ ++ + + EI+++FKIV++E
Sbjct: 355 LINDTNRSISTLAITTLLKTMGAGTVDTGSVGGESVDRLITKMTSLMDEITEDFKIVIIE 414
Query: 51 AIRALCLKFPRKHAVLMNFLSAMLRDEG 78
AI L LKFP KH L++FL+ +LRD+G
Sbjct: 415 AIENLALKFPAKHKKLVSFLTDLLRDDG 442
Score = 45 (20.9 bits), Expect = 1.0e-31, Sum P(3) = 1.0e-31
Identities = 12/55 (21%), Positives = 28/55 (50%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASI 413
++DLE+ D + + NF +++ D+ N+ +S +++I+ AV +
Sbjct: 816 IDDLELLAGDFIIPLYNSNFTSIF-----DQLPNQDSGVVNISNVDTIENAVNKV 865
>ASPGD|ASPL0000072207 [details] [associations]
symbol:AN4547 species:162425 "Emericella nidulans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 EMBL:BN001303 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
HOGENOM:HOG000184434 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE
EnsemblFungi:CADANIAT00005891 Uniprot:C8V880
Length = 917
Score = 309 (113.8 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 97/283 (34%), Positives = 141/283 (49%)
Query: 40 ISDEFKIVVVEAIRALCLKFPRKHAV--LMNFLSAMLRD-EGVFRGGIDVLVRSKLAV-- 94
IS+ + + AI L LK + +V LM +S + D F+ I +R+
Sbjct: 350 ISNTNRSIATFAITTL-LKTGNEASVDRLMKQISGFMADITDEFKITIVEAIRTLCLKFP 408
Query: 95 SADTGVTMQLT--VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSL 152
S G+ L+ +R G E+K S+ +++ +I+ PE+KE LAHLCEFIEDCE T L
Sbjct: 409 SKQAGMLSFLSGILRDEGGYEFKRSVVESMFDLIKFVPESKEDALAHLCEFIEDCEFTKL 468
Query: 153 AVRILHLLGKEGPRAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGA----------- 201
+VR+LHLLG EGP+ QP+KYIR+IYNRV+LEN +FG
Sbjct: 469 SVRVLHLLGVEGPKTSQPTKYIRYIYNRVVLENAIVRAAAVTALAKFGVGQKDPEVKSSV 528
Query: 202 -----LCQMDGDDEVRDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHP 256
C D DDEVRDRA ++A ++ ++ +I M S+ + E L Y
Sbjct: 529 SVLLTRCLDDTDDEVRDRAALNLRLMAEED-EMANLFIKNESMYSLSTFEHQLVMYVTSG 587
Query: 257 SPTPFDMSSIPLSTI-TTSDPTEMADRLRTPSGGVASEPTAQA 298
F ++ +STI S +A+ RT A+ PT +A
Sbjct: 588 DKETF-ATAFDVSTIPVVSQEQALAEE-RTKKLTSAT-PTLKA 627
Score = 238 (88.8 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 46/78 (58%), Positives = 61/78 (78%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+IS++NRS KTG+E+SVDRLMKQI+ F+++I+DEFKI +VEAIR LCLKFP
Sbjct: 349 LISNTNRSIATFAITTLLKTGNEASVDRLMKQISGFMADITDEFKITIVEAIRTLCLKFP 408
Query: 61 RKHAVLMNFLSAMLRDEG 78
K A +++FLS +LRDEG
Sbjct: 409 SKQAGMLSFLSGILRDEG 426
Score = 123 (48.4 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 53/211 (25%), Positives = 90/211 (42%)
Query: 203 CQMDGDDEVRDRATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAY----NLHPSP 258
C D DDEVRDRA ++A ++ ++ +I M S+ + E L Y +
Sbjct: 535 CLDDTDDEVRDRAALNLRLMAEED-EMANLFIKNESMYSLSTFEHQLVMYVTSGDKETFA 593
Query: 259 TPFDMSSIPLST------------ITTSDPTEMADRLRTPSGGVASEPTAQATARVESYY 306
T FD+S+IP+ + +T++ PT A P G A+ ATA Y
Sbjct: 594 TAFDVSTIPVVSQEQALAEERTKKLTSATPTLKAPSTGPPKGAKANGVAEAATAAATQKY 653
Query: 307 EKLSAALPEIANLPGTLFKSAAPVRRD-------LRSVFHSYAVSMRRQLDV-HSASGVG 358
+ +PE+ GTL KS+ PV + +V H + + Q D+ ++
Sbjct: 654 AEQLMQIPELKAY-GTLLKSSVPVELSESETEYVVTAVKHIFKEHIVLQYDIKNTLPDTV 712
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDE 389
LED+ + + + + F+ + T+E
Sbjct: 713 LEDVTVVATPSEEDILEEEFIVPAPKLNTNE 743
Score = 60 (26.2 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+ DLE++ SD + +F +WE+A + E+ +T LS ++ I +A ++
Sbjct: 794 VNDLELTGSDYVIPTFAGSFDHVWEQAGANGE--EVSETLQLSNLKGIADATEQLI 847
Score = 59 (25.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 79 VFRGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKASIA 119
V G + L+ K+A S TGVT ++TVR+ G A IA
Sbjct: 876 VLGGRVAALI--KMAYSTKTGVTTKITVRAEEGGVAPAVIA 914
Score = 42 (19.8 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 18/72 (25%), Positives = 29/72 (40%)
Query: 222 LASQNKQLIQDYIIEPLMVSIPSLERALHAYNLHPSPTPFDMSSIPLSTITTSDPTEMAD 281
+A +QLI ++PL + +L + H L T L + S T +
Sbjct: 839 IADATEQLISTLSLQPLEGTDVALSNSTHTLKLF-GKTVLGGRVAALIKMAYSTKTGVTT 897
Query: 282 RL--RTPSGGVA 291
++ R GGVA
Sbjct: 898 KITVRAEEGGVA 909
>POMBASE|SPAC57A7.10c [details] [associations]
symbol:sec21 "coatomer gamma subunit Sec21 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISO] [GO:0030126 "COPI vesicle coat"
evidence=ISO] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
PomBase:SPAC57A7.10c GO:GO:0005829 GO:GO:0006886 EMBL:CU329670
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CU329670_GR GO:GO:0005198
GO:GO:0006888 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 eggNOG:COG5240 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:DESIFAN PIR:T38944 RefSeq:NP_593371.1
ProteinModelPortal:P87140 STRING:P87140 EnsemblFungi:SPAC57A7.10c.1
GeneID:2542247 KEGG:spo:SPAC57A7.10c OrthoDB:EOG4FFH8X
NextBio:20803312 Uniprot:P87140
Length = 905
Score = 295 (108.9 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 67/175 (38%), Positives = 99/175 (56%)
Query: 111 GLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRAKQP 170
G E+K + D I +I+ PE+KE LA LCEFIEDCE+ +AVRIL +LG+EGP+A +P
Sbjct: 430 GYEFKRAAVDAISDMIKYIPESKERALAELCEFIEDCEYPKIAVRILSILGEEGPKASEP 489
Query: 171 SKYIRFIYNRVILENXXXXXXXXXXXXQFG----------------ALCQMDGDDEVRDR 214
+++IR+IYNR++LEN +FG C D DDEVRDR
Sbjct: 490 TRFIRYIYNRIMLENAIVRSAAVSALTKFGLNAEDKFVQRSVKVILTRCLEDADDEVRDR 549
Query: 215 ATYYHSILASQNKQLIQDYIIEPLMVSIPSLERALHAY-NLHPSPTPFDMSSIPL 268
A + S+ A +++ + + S+P+LER+L Y + FD+ S+P+
Sbjct: 550 AAF--SVKALEDRDAFLPVVKSDKIPSLPALERSLVIYISERKFGQGFDIKSVPV 602
Score = 249 (92.7 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 79/224 (35%), Positives = 111/224 (49%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
+I+D NRS KTG++ SVDRLMKQI TF+S+ISD FKI+VV+AIR+LCLKFP
Sbjct: 352 LITDVNRSIATYAITTLLKTGNDESVDRLMKQIVTFMSDISDNFKIIVVDAIRSLCLKFP 411
Query: 61 RKHAVLMNFLSAMLRDEGVF---RGGIDVLVRSKLAVSADTGVTMQLTVRSTSGLEYKAS 117
RK ++ FLS +L DEG + R +D + + + EY
Sbjct: 412 RKQDSMLTFLSNILCDEGGYEFKRAAVDAISDMIKYIPESKERALAELCEFIEDCEYP-K 470
Query: 118 IADTIITII-EENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPSKY 173
IA I++I+ EE P+A E +I + E+ + + L K G A+ K+
Sbjct: 471 IAVRILSILGEEGPKASEP--TRFIRYIYNRIMLENAIVRSAAVSALTKFGLNAED--KF 526
Query: 174 IRFIYNRVILENXXXXXXXXXXXXQFGALCQMDGDDEVRDRATY 217
++ +VIL C D DDEVRDRA +
Sbjct: 527 VQRSV-KVILTR-----------------CLEDADDEVRDRAAF 552
Score = 52 (23.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 12/55 (21%), Positives = 29/55 (52%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASI 413
++DL++S D ++ + NF L++ E +E + + LS ++S + + +
Sbjct: 784 IDDLDVSAGDFISPAYESNFDGLFDSLE-----HEASEVYVLSLLDSFRSTCSRV 833
>SGD|S000005231 [details] [associations]
symbol:SEC21 "Gamma subunit of coatomer" species:4932
"Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle coat"
evidence=IEA;IDA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IMP] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0030663 "COPI-coated
vesicle membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 SGD:S000005231
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 GO:GO:0005768 EMBL:BK006947
GO:GO:0006888 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 GO:GO:0006890 eggNOG:COG5240
GeneTree:ENSGT00390000016313 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 OMA:KETEEGH OrthoDB:EOG4FFH8X EMBL:M59708
EMBL:Z71563 PIR:S63261 RefSeq:NP_014112.1 ProteinModelPortal:P32074
SMR:P32074 DIP:DIP-1611N IntAct:P32074 MINT:MINT-399140
STRING:P32074 PaxDb:P32074 PeptideAtlas:P32074 EnsemblFungi:YNL287W
GeneID:855429 KEGG:sce:YNL287W CYGD:YNL287w NextBio:979304
Genevestigator:P32074 GermOnline:YNL287W Uniprot:P32074
Length = 935
Score = 247 (92.0 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 60/150 (40%), Positives = 80/150 (53%)
Query: 108 STSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGPRA 167
S G ++K SI + +I I+ P++KE L +LC+FIEDCE + VRILHLLGKEGP A
Sbjct: 426 SEGGFKFKNSIVEALIDIVSFVPQSKELALENLCDFIEDCEFNEILVRILHLLGKEGPSA 485
Query: 168 KQPSKYIRFIYNRVILENXXXXXXXXXXXXQFG----------ALCQM------DGDDEV 211
PS Y+R IYNRV+LEN +F ++ + D DDEV
Sbjct: 486 PNPSLYVRHIYNRVVLENSIIRSAAVVALSKFALTKNDPTLYESIISLLKRIANDKDDEV 545
Query: 212 RDRATYYHSILASQNKQLIQDYIIEPLMVS 241
RDRAT + S + D I + L+ S
Sbjct: 546 RDRATIALEFIDSARNK--DDVIAQNLIES 573
Score = 37 (18.1 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASILL 415
++ + ++ D + NF A ++E +E F + + SIQE V I+L
Sbjct: 813 IDSIFLNAGDYVKSSFTGNFSATFDELPCEEVA-----VFNIQEDLSIQEVVDKIIL 864
>GENEDB_PFALCIPARUM|PF11_0463 [details] [associations]
symbol:PF11_0463 "coat protein, gamma subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0005829
"cytosol" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 EMBL:AE014186
HOGENOM:HOG000184434 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 RefSeq:XP_001348130.1
ProteinModelPortal:Q8IHR6 PRIDE:Q8IHR6
EnsemblProtists:PF11_0463:mRNA GeneID:811006 KEGG:pfa:PF11_0463
EuPathDB:PlasmoDB:PF3D7_1145100 OMA:EDVEYSP ProtClustDB:CLSZ2433713
Uniprot:Q8IHR6
Length = 1068
Score = 231 (86.4 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 51/138 (36%), Positives = 73/138 (52%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R ++KAS D+II II P A+ET + LCEFIEDCE+ +L ++++ L P
Sbjct: 519 LRDDESYQFKASTIDSIILIITNLPNAEETAILQLCEFIEDCEYHALLLKVIRFLLMHIP 578
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGALCQ--------------MDGDDEV 211
+ K PSKYIR+IYNR++LEN C D DDEV
Sbjct: 579 KTKNPSKYIRYIYNRLLLENSTIRIDGMYALFYIALKCAENSKDILVLLNCLLADNDDEV 638
Query: 212 RDRATYYHSILASQNKQL 229
RDR +++ +L + K+L
Sbjct: 639 RDRTNFFYYMLKEKIKEL 656
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/193 (24%), Positives = 99/193 (51%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
++ D+N+S KTG+E+S+D+L+ QI +++ + FKI ++E ++ LC +P
Sbjct: 446 LLYDNNKSICVLAFTTLLKTGNETSIDKLLNQINNYMTADNTTFKIKIIEEVKNLCFIYP 505
Query: 61 RKHAVLMNFLSAMLRDEGVFR---GGID--VLVRSKLAVSADTGVTMQLTVRSTSGLEYK 115
K +++NFLS LRD+ ++ ID +L+ + L + +T + +QL EY
Sbjct: 506 NKCNIILNFLSNNLRDDESYQFKASTIDSIILIITNLPNAEETAI-LQLC-EFIEDCEYH 563
Query: 116 ASIADTIITIIEENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPSK 172
A + I ++ P+ K + +I + E++++ + ++ L + + SK
Sbjct: 564 ALLLKVIRFLLMHIPKTKNP--SKYIRYIYNRLLLENSTIRIDGMYALFYIALKCAENSK 621
Query: 173 YIRFIYNRVILEN 185
I + N ++ +N
Sbjct: 622 DILVLLNCLLADN 634
>UNIPROTKB|Q8IHR6 [details] [associations]
symbol:PF11_0463 "Coatomer subunit gamma" species:36329
"Plasmodium falciparum 3D7" [GO:0005829 "cytosol" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0005829
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 EMBL:AE014186 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 RefSeq:XP_001348130.1 ProteinModelPortal:Q8IHR6
PRIDE:Q8IHR6 EnsemblProtists:PF11_0463:mRNA GeneID:811006
KEGG:pfa:PF11_0463 EuPathDB:PlasmoDB:PF3D7_1145100 OMA:EDVEYSP
ProtClustDB:CLSZ2433713 Uniprot:Q8IHR6
Length = 1068
Score = 231 (86.4 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 51/138 (36%), Positives = 73/138 (52%)
Query: 106 VRSTSGLEYKASIADTIITIIEENPEAKETGLAHLCEFIEDCEHTSLAVRILHLLGKEGP 165
+R ++KAS D+II II P A+ET + LCEFIEDCE+ +L ++++ L P
Sbjct: 519 LRDDESYQFKASTIDSIILIITNLPNAEETAILQLCEFIEDCEYHALLLKVIRFLLMHIP 578
Query: 166 RAKQPSKYIRFIYNRVILENXXXXXXXXXXXXQFGALCQ--------------MDGDDEV 211
+ K PSKYIR+IYNR++LEN C D DDEV
Sbjct: 579 KTKNPSKYIRYIYNRLLLENSTIRIDGMYALFYIALKCAENSKDILVLLNCLLADNDDEV 638
Query: 212 RDRATYYHSILASQNKQL 229
RDR +++ +L + K+L
Sbjct: 639 RDRTNFFYYMLKEKIKEL 656
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/193 (24%), Positives = 99/193 (51%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVVEAIRALCLKFP 60
++ D+N+S KTG+E+S+D+L+ QI +++ + FKI ++E ++ LC +P
Sbjct: 446 LLYDNNKSICVLAFTTLLKTGNETSIDKLLNQINNYMTADNTTFKIKIIEEVKNLCFIYP 505
Query: 61 RKHAVLMNFLSAMLRDEGVFR---GGID--VLVRSKLAVSADTGVTMQLTVRSTSGLEYK 115
K +++NFLS LRD+ ++ ID +L+ + L + +T + +QL EY
Sbjct: 506 NKCNIILNFLSNNLRDDESYQFKASTIDSIILIITNLPNAEETAI-LQLC-EFIEDCEYH 563
Query: 116 ASIADTIITIIEENPEAKETGLAHLCEFIED---CEHTSLAVRILHLLGKEGPRAKQPSK 172
A + I ++ P+ K + +I + E++++ + ++ L + + SK
Sbjct: 564 ALLLKVIRFLLMHIPKTKNP--SKYIRYIYNRLLLENSTIRIDGMYALFYIALKCAENSK 621
Query: 173 YIRFIYNRVILEN 185
I + N ++ +N
Sbjct: 622 DILVLLNCLLADN 634
>UNIPROTKB|D4A113 [details] [associations]
symbol:D4A113 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 InterPro:IPR017106 PANTHER:PTHR10261 IPI:IPI00951430
PRIDE:D4A113 Ensembl:ENSRNOT00000014734 ArrayExpress:D4A113
Uniprot:D4A113
Length = 382
Score = 154 (59.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 1 MISDSNRSXXXXXXXXXXKTGSESSVDRLMKQIATFVSEISDEFKIVVV 49
+I+DSNRS KTGSESSVDRLMKQI++FVSEISDEFK V++
Sbjct: 332 LITDSNRSIATLAITTLLKTGSESSVDRLMKQISSFVSEISDEFKKVLI 380
>UNIPROTKB|H7C1T7 [details] [associations]
symbol:COPG2 "Coatomer subunit gamma-2" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 EMBL:AC007938 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 EMBL:AC009274 HGNC:HGNC:2237 EMBL:AC144863
EMBL:AC145213 EMBL:AC145656 ProteinModelPortal:H7C1T7
Ensembl:ENST00000425248 Uniprot:H7C1T7
Length = 155
Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 359 LEDLEISLSDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
LEDLE+++SD + KV KPNF A WEE ++ E E+TF LS ++++EAV +I+
Sbjct: 34 LEDLEVTVSDHIQKVLKPNFAAAWEEV--GDTF-EKEETFALSSTKTLEEAVNNII 86
>UNIPROTKB|H0Y8X7 [details] [associations]
symbol:COPG1 "Coatomer subunit gamma-1" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
Pfam:PF08752 InterPro:IPR013041 GO:GO:0006886 GO:GO:0016192
GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30
GO:GO:0030126 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 HGNC:HGNC:2236 ChiTaRS:COPG1 EMBL:AC137695
Ensembl:ENST00000509889 Uniprot:H0Y8X7
Length = 188
Score = 118 (46.6 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/108 (34%), Positives = 60/108 (55%)
Query: 318 NLPGTLFKSAAPVRRDLRSVFHSYAVSMRRQL-DVHSASGV----G------LEDLEISL 366
N PGT + A + D +V +++ M+ + D +G G LEDLE+++
Sbjct: 15 NQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTV 74
Query: 367 SDQMAKVNKPNFLALWEEAETDESMNEMEDTFCLSKMESIQEAVASIL 414
+D + KV K NF A W+E DE E E+TF LS +++++EAV +I+
Sbjct: 75 ADHIQKVMKLNFEAAWDEVG-DEF--EKEETFTLSTIKTLEEAVGNIV 119
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 421 399 0.00097 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 606 (64 KB)
Total size of DFA: 221 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.32u 0.11s 34.43t Elapsed: 00:00:03
Total cpu time: 34.33u 0.11s 34.44t Elapsed: 00:00:03
Start: Thu Aug 15 16:52:43 2013 End: Thu Aug 15 16:52:46 2013