BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8505
(118 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322797098|gb|EFZ19377.1| hypothetical protein SINV_00081 [Solenopsis invicta]
Length = 110
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 81/97 (83%), Gaps = 11/97 (11%)
Query: 17 QKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSK 76
Q+TVHVLHNSEQPASVF++LESG K +P++AD LFDLLMMKMT +YTSK
Sbjct: 1 QRTVHVLHNSEQPASVFALLESGS-----------KVVPLIADGLFDLLMMKMTNIYTSK 49
Query: 77 KQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
KQTK+ESKGPRFE+GDFCVKLGSV++SQNFK VLVEV
Sbjct: 50 KQTKIESKGPRFEIGDFCVKLGSVTMSQNFKGVLVEV 86
>gi|357608104|gb|EHJ65827.1| putative mediator complex subunit [Danaus plexippus]
Length = 157
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 11/101 (10%)
Query: 14 LGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVY 73
+GS KTVH+LHNSEQPASVFSILESG KNI V+AD LFDLLMMK++ Y
Sbjct: 1 MGSTKTVHILHNSEQPASVFSILESGT-----------KNIHVIADGLFDLLMMKLSQHY 49
Query: 74 TSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
TSKKQTK+ESKGP+FELGDFC+KLGSV+++QNFK +L+EV
Sbjct: 50 TSKKQTKIESKGPKFELGDFCIKLGSVTMNQNFKGILIEVE 90
>gi|156543437|ref|XP_001600958.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Nasonia vitripennis]
Length = 206
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 82/102 (80%), Gaps = 11/102 (10%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
LG Q+TVHVLHNSEQPASVF+ILESG K +P++AD LFDLLM+KMT +
Sbjct: 51 QLGQQRTVHVLHNSEQPASVFAILESGN-----------KMVPLIADGLFDLLMLKMTNI 99
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YT+KKQTK+E KGPRFELGDFC+KLG+V+++QNFK VLVEV
Sbjct: 100 YTNKKQTKIECKGPRFELGDFCIKLGTVNMTQNFKGVLVEVE 141
>gi|307209851|gb|EFN86630.1| Mediator of RNA polymerase II transcription subunit 20
[Harpegnathos saltator]
Length = 187
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 82/102 (80%), Gaps = 11/102 (10%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
+G Q+TVHVLHNSEQPASVF+ILESG K +P++AD LFDLLM+KM +
Sbjct: 32 EVGIQRTVHVLHNSEQPASVFAILESGN-----------KIVPLIADGLFDLLMLKMPSI 80
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
Y+SKKQTK+ESKGPRFELGDFCVKLGSV++SQNFK VLVEV
Sbjct: 81 YSSKKQTKIESKGPRFELGDFCVKLGSVTMSQNFKGVLVEVE 122
>gi|242015746|ref|XP_002428508.1| mediator complex subunit, putative [Pediculus humanus corporis]
gi|212513142|gb|EEB15770.1| mediator complex subunit, putative [Pediculus humanus corporis]
Length = 206
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 11/101 (10%)
Query: 14 LGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVY 73
LGSQKT+HV HNSEQPA+VFSILE+G K + +VAD LFDLLM+KMT +Y
Sbjct: 52 LGSQKTLHVFHNSEQPATVFSILETGT-----------KTVSLVADGLFDLLMLKMTSIY 100
Query: 74 TSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
TSKKQTK ESKG RFELGDFCVKLG+V++SQ+FK VLVEV
Sbjct: 101 TSKKQTKCESKGSRFELGDFCVKLGNVTMSQSFKGVLVEVE 141
>gi|157116862|ref|XP_001652880.1| hypothetical protein AaeL_AAEL001260 [Aedes aegypti]
gi|122118710|sp|Q17LR9.1|MED20_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20
gi|108883408|gb|EAT47633.1| AAEL001260-PA [Aedes aegypti]
Length = 219
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 80/102 (78%), Gaps = 11/102 (10%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
+G+ KTVH+LHNSEQPASVFSIL++G K IP+V D LFDLLM +++PV
Sbjct: 50 QIGATKTVHILHNSEQPASVFSILDTGT-----------KQIPLVTDGLFDLLMTRISPV 98
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YTSKKQTK+ESKGPRFE GDF +KLGSV++SQNFK VLVEV
Sbjct: 99 YTSKKQTKIESKGPRFEFGDFLIKLGSVTMSQNFKGVLVEVE 140
>gi|189237999|ref|XP_001812951.1| PREDICTED: similar to Mediator complex subunit 20 CG18780-PA
[Tribolium castaneum]
gi|270006649|gb|EFA03097.1| hypothetical protein TcasGA2_TC013006 [Tribolium castaneum]
Length = 206
Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 80/102 (78%), Gaps = 11/102 (10%)
Query: 12 AHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTP 71
A LG Q+TVHVLHNSEQPA+VFSILE+G K IP+ D LFDLLMMKM+
Sbjct: 49 AALGHQRTVHVLHNSEQPATVFSILETGQ-----------KTIPLATDGLFDLLMMKMSG 97
Query: 72 VYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
Y+SKKQTK ESKGPR+E+GDFCVKLG+V++SQNF+ VLVEV
Sbjct: 98 FYSSKKQTKAESKGPRYEIGDFCVKLGTVTVSQNFRGVLVEV 139
>gi|170032200|ref|XP_001843970.1| trf-proximal protein [Culex quinquefasciatus]
gi|167872086|gb|EDS35469.1| trf-proximal protein [Culex quinquefasciatus]
Length = 217
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 79/102 (77%), Gaps = 11/102 (10%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
+G KTVH+LHNSEQPASVFSIL+SG K IP+V D LFDLLM +++PV
Sbjct: 50 QIGPPKTVHILHNSEQPASVFSILDSGA-----------KQIPLVTDGLFDLLMARISPV 98
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YTSKKQTK+ESKGPRFE GDF +KLGSV++SQNFK VLVEV
Sbjct: 99 YTSKKQTKIESKGPRFEFGDFLIKLGSVTMSQNFKGVLVEVE 140
>gi|332373226|gb|AEE61754.1| unknown [Dendroctonus ponderosae]
Length = 211
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 11/103 (10%)
Query: 12 AHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTP 71
A LG Q+TVHVLHNSEQPA+VFS+L++G K IP+V D LFDLLMMKM+
Sbjct: 49 ASLGHQRTVHVLHNSEQPATVFSLLDTGT-----------KIIPLVTDGLFDLLMMKMSS 97
Query: 72 VYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
Y KKQTK ESKGPR+E+GDFCVKLGSVS+S NFK +LVEV
Sbjct: 98 FYQCKKQTKAESKGPRYEIGDFCVKLGSVSVSSNFKGILVEVE 140
>gi|340713978|ref|XP_003395510.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like isoform 1 [Bombus terrestris]
Length = 205
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 80/102 (78%), Gaps = 12/102 (11%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
LG+Q+T+HVLHNSEQPAS F+ILESG K +P++AD LFDLLM KM+ V
Sbjct: 51 QLGAQRTLHVLHNSEQPASAFAILESGN-----------KVVPLIADGLFDLLMYKMSSV 99
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YT+K Q K+ESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 100 YTNKMQ-KMESKGPRFEIGDFCVKLGSVTINQNFKGVLVEVE 140
>gi|158294460|ref|XP_315616.4| AGAP005604-PA [Anopheles gambiae str. PEST]
gi|205830885|sp|Q7Q6Y4.6|MED20_ANOGA RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20
gi|157015575|gb|EAA11828.4| AGAP005604-PA [Anopheles gambiae str. PEST]
Length = 218
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 76/102 (74%), Gaps = 11/102 (10%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
LG KTVH+LHNSEQPASVFSIL++G K IP+V D LFDLLM ++ P
Sbjct: 49 QLGPPKTVHILHNSEQPASVFSILDTGT-----------KQIPLVTDGLFDLLMTRIAPA 97
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YTSKKQTK+ESKG RFE GDF +KLGSV++SQNFK VLVEV
Sbjct: 98 YTSKKQTKIESKGQRFEFGDFVIKLGSVTMSQNFKGVLVEVE 139
>gi|383849433|ref|XP_003700349.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like isoform 1 [Megachile rotundata]
Length = 205
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 80/102 (78%), Gaps = 12/102 (11%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
LG Q+T+HVLHNSEQPASVF+ILESG K +P++AD LFDLLM K++ +
Sbjct: 51 QLGVQRTLHVLHNSEQPASVFAILESGN-----------KVVPLIADGLFDLLMYKISSI 99
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YT+K Q KVESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 100 YTNKMQ-KVESKGPRFEIGDFCVKLGSVTINQNFKGVLVEVE 140
>gi|380025054|ref|XP_003696296.1| PREDICTED: LOW QUALITY PROTEIN: trans-2,3-enoyl-CoA reductase-like
[Apis florea]
Length = 485
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 66/101 (65%), Positives = 79/101 (78%), Gaps = 12/101 (11%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
LG Q+T+HVLHNSEQPAS F+ILESG K +P++AD LFDLLM K++ V
Sbjct: 51 QLGVQRTLHVLHNSEQPASAFAILESGN-----------KVVPLIADGLFDLLMYKISSV 99
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
YT+K Q K+ESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 100 YTNKMQ-KMESKGPRFEIGDFCVKLGSVTINQNFKGVLVEV 139
>gi|328781671|ref|XP_001121318.2| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like isoform 1 [Apis mellifera]
Length = 205
Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 79/102 (77%), Gaps = 12/102 (11%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
LG Q+T+HVLHNSEQPAS F+ILESG K +P++AD LFDLLM K++ V
Sbjct: 51 QLGVQRTLHVLHNSEQPASAFAILESGN-----------KVVPLIADGLFDLLMYKISSV 99
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YT+K Q K+ESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 100 YTNKMQ-KMESKGPRFEIGDFCVKLGSVTINQNFKGVLVEVE 140
>gi|383849435|ref|XP_003700350.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like isoform 2 [Megachile rotundata]
Length = 208
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 12/104 (11%)
Query: 11 YAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMT 70
+ H Q+T+HVLHNSEQPASVF+ILESG K +P++AD LFDLLM K++
Sbjct: 52 FFHGSVQRTLHVLHNSEQPASVFAILESGN-----------KVVPLIADGLFDLLMYKIS 100
Query: 71 PVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
+YT+K Q KVESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 101 SIYTNKMQ-KVESKGPRFEIGDFCVKLGSVTINQNFKGVLVEVE 143
>gi|340713982|ref|XP_003395512.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like isoform 3 [Bombus terrestris]
Length = 208
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/102 (64%), Positives = 79/102 (77%), Gaps = 12/102 (11%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
H +Q+T+HVLHNSEQPAS F+ILESG K +P++AD LFDLLM KM+ V
Sbjct: 54 HGRAQRTLHVLHNSEQPASAFAILESGN-----------KVVPLIADGLFDLLMYKMSSV 102
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YT+K Q K+ESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 103 YTNKMQ-KMESKGPRFEIGDFCVKLGSVTINQNFKGVLVEVE 143
>gi|350421215|ref|XP_003492772.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Bombus impatiens]
Length = 164
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 78/98 (79%), Gaps = 12/98 (12%)
Query: 16 SQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTS 75
+Q+T+HVLHNSEQPAS F+ILESG K +P++AD LFDLLM KM+ VYT+
Sbjct: 13 AQRTLHVLHNSEQPASAFAILESGN-----------KVVPLIADGLFDLLMYKMSSVYTN 61
Query: 76 KKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
K Q K+ESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 62 KMQ-KMESKGPRFEIGDFCVKLGSVTINQNFKGVLVEV 98
>gi|340713980|ref|XP_003395511.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like isoform 2 [Bombus terrestris]
Length = 208
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 12/97 (12%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+T+HVLHNSEQPAS F+ILESG K +P++AD LFDLLM KM+ VYT+K
Sbjct: 59 RTLHVLHNSEQPASAFAILESGN-----------KVVPLIADGLFDLLMYKMSSVYTNKM 107
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
Q K+ESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 108 Q-KMESKGPRFEIGDFCVKLGSVTINQNFKGVLVEVE 143
>gi|328781673|ref|XP_003250014.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like isoform 2 [Apis mellifera]
Length = 208
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 80/105 (76%), Gaps = 13/105 (12%)
Query: 11 YAHLGSQ-KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKM 69
+ H GS +T+HVLHNSEQPAS F+ILESG K +P++AD LFDLLM K+
Sbjct: 51 HVHHGSPGRTLHVLHNSEQPASAFAILESGN-----------KVVPLIADGLFDLLMYKI 99
Query: 70 TPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
+ VYT+K Q K+ESKGPRFE+GDFCVKLGSV+I+QNFK VLVEV
Sbjct: 100 SSVYTNKMQ-KMESKGPRFEIGDFCVKLGSVTINQNFKGVLVEVE 143
>gi|321461210|gb|EFX72244.1| hypothetical protein DAPPUDRAFT_59294 [Daphnia pulex]
Length = 218
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 78/103 (75%), Gaps = 9/103 (8%)
Query: 12 AHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTP 71
A LG+ ++VH+LHNSE PASVF++LE+ SG K + +VAD+LFDLLM+K++
Sbjct: 52 ASLGAPRSVHLLHNSETPASVFALLEAA--------SGN-KTVALVADNLFDLLMLKLSN 102
Query: 72 VYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YT+KKQTK+ES+GPRFE GDF VKLGSV++ FK +LVEV
Sbjct: 103 FYTAKKQTKIESRGPRFEAGDFLVKLGSVTMGPAFKGILVEVE 145
>gi|195165467|ref|XP_002023560.1| GL19867 [Drosophila persimilis]
gi|194105694|gb|EDW27737.1| GL19867 [Drosophila persimilis]
Length = 256
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI++SG K + +VADS+FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDSGTG----------KQVSLVADSIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 145
>gi|198468051|ref|XP_002133916.1| GA28197 [Drosophila pseudoobscura pseudoobscura]
gi|198146229|gb|EDY72543.1| GA28197 [Drosophila pseudoobscura pseudoobscura]
Length = 256
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI++SG K + +VADS+FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDSGTG----------KQVSLVADSIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 145
>gi|195132099|ref|XP_002010481.1| GI15952 [Drosophila mojavensis]
gi|193908931|gb|EDW07798.1| GI15952 [Drosophila mojavensis]
Length = 246
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 73/97 (75%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT ++TSKK
Sbjct: 57 RAVHVLHNSEYPASTFSIIDNGTG----------KQVAIVADNIFDLLMLKMTSIFTSKK 106
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 107 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 143
>gi|195393396|ref|XP_002055340.1| GJ18844 [Drosophila virilis]
gi|194149850|gb|EDW65541.1| GJ18844 [Drosophila virilis]
Length = 246
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VADS+FDLLM+KMT +TSKK
Sbjct: 57 RAVHVLHNSEYPASTFSIIDNGTG----------KQVALVADSIFDLLMLKMTSTFTSKK 106
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 107 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 143
>gi|1834425|emb|CAA71871.1| Trf-proximal protein [Drosophila melanogaster]
Length = 252
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDNGTG----------KQVAIVADNIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 145
>gi|24582677|ref|NP_524663.2| mediator complex subunit 20, isoform A [Drosophila melanogaster]
gi|29428177|sp|P91641.2|MED20_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20; AltName:
Full=Protein trf-proximal; AltName: Full=dMED20;
AltName: Full=dTrap26; AltName: Full=dTrfp
gi|22945933|gb|AAF52599.2| mediator complex subunit 20, isoform A [Drosophila melanogaster]
gi|28316908|gb|AAO39476.1| RE63851p [Drosophila melanogaster]
gi|220948720|gb|ACL86903.1| MED20-PA [synthetic construct]
gi|220958088|gb|ACL91587.1| MED20-PA [synthetic construct]
Length = 252
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDNGTG----------KQVAIVADNIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 145
>gi|195472901|ref|XP_002088736.1| GE11200 [Drosophila yakuba]
gi|194174837|gb|EDW88448.1| GE11200 [Drosophila yakuba]
Length = 252
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDNGTG----------KQVAIVADNIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 145
>gi|442626696|ref|NP_001260223.1| mediator complex subunit 20, isoform B [Drosophila melanogaster]
gi|440213531|gb|AGB92759.1| mediator complex subunit 20, isoform B [Drosophila melanogaster]
Length = 268
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDNGTG----------KQVAIVADNIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 145
>gi|195339080|ref|XP_002036149.1| GM13189 [Drosophila sechellia]
gi|194130029|gb|EDW52072.1| GM13189 [Drosophila sechellia]
Length = 252
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 71/97 (73%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDNGTG----------KQVAIVADNIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ +FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMDHFKGILIEIE 145
>gi|194863017|ref|XP_001970235.1| GG23479 [Drosophila erecta]
gi|190662102|gb|EDV59294.1| GG23479 [Drosophila erecta]
Length = 252
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSECPASTFSIIDNGTG----------KQVAIVADNIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 145
>gi|195577452|ref|XP_002078584.1| GD22443 [Drosophila simulans]
gi|194190593|gb|EDX04169.1| GD22443 [Drosophila simulans]
Length = 252
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 71/97 (73%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDNGTG----------KQVAIVADNIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ +FK +L+E+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMDHFKGILIEIE 145
>gi|194767069|ref|XP_001965641.1| GF22602 [Drosophila ananassae]
gi|190619632|gb|EDV35156.1| GF22602 [Drosophila ananassae]
Length = 246
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 71/97 (73%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 59 RAVHVLHNSEYPASTFSIIDNGTG----------KQVALVADNIFDLLMLKMTNTFTSKK 108
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ +FK +LVE+
Sbjct: 109 QTKIESRGARFEYGDFVIKLGSVTMMDHFKGILVEIE 145
>gi|195043823|ref|XP_001991697.1| GH12797 [Drosophila grimshawi]
gi|193901455|gb|EDW00322.1| GH12797 [Drosophila grimshawi]
Length = 250
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 72/97 (74%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLH+SE PAS FSI+++G K + +VAD++FDLLM+KMT +TSKK
Sbjct: 57 RAVHVLHDSEFPASTFSIIDNGTG----------KQVALVADAIFDLLMLKMTSTFTSKK 106
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 107 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 143
>gi|195438950|ref|XP_002067395.1| GK16399 [Drosophila willistoni]
gi|194163480|gb|EDW78381.1| GK16399 [Drosophila willistoni]
Length = 253
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 71/97 (73%), Gaps = 10/97 (10%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
+ VHVLHNSE PAS FSI+++G K + +VAD++FDLLM+KMT + SKK
Sbjct: 58 RAVHVLHNSEYPASTFSIIDNGTG----------KQVSLVADNIFDLLMLKMTATFASKK 107
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
QTK+ES+G RFE GDF +KLGSV++ ++FK +L+E+
Sbjct: 108 QTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIE 144
>gi|193666809|ref|XP_001949764.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Acyrthosiphon pisum]
Length = 214
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 77/100 (77%), Gaps = 11/100 (11%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
LG+Q+T+HV HNSEQPASVF+IL++G K +PVVAD+LFDLL++KM+ V
Sbjct: 51 QLGAQRTLHVFHNSEQPASVFAILDNGTG----------KTVPVVADALFDLLLLKMSSV 100
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVE 112
YTSKK +KVE +GPRFEL DF +K+G+++I+ N K ++VE
Sbjct: 101 YTSKK-SKVEIRGPRFELNDFVIKIGAININHNVKGIIVE 139
>gi|346466441|gb|AEO33065.1| hypothetical protein [Amblyomma maculatum]
Length = 234
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 71/102 (69%), Gaps = 14/102 (13%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
++ ++V+++H++E PA+ F++L++G + +VAD FD+LM+KM +
Sbjct: 77 NISPSRSVNIIHDTEHPATCFALLDTG--------------MCLVADITFDMLMLKMNGI 122
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
YTSKK TK+ESKGPR+E+ DF VK+GSVS+ +F+ +LVEV
Sbjct: 123 YTSKKSTKIESKGPRYEIADFLVKVGSVSMGPSFRGILVEVE 164
>gi|241672383|ref|XP_002411478.1| decarboxylase, putative [Ixodes scapularis]
gi|215504132|gb|EEC13626.1| decarboxylase, putative [Ixodes scapularis]
Length = 212
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 72/112 (64%), Gaps = 14/112 (12%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TY++ ++V+++HN+E PA+ F++L++G + +VAD F
Sbjct: 45 TYYSAPNISEFTDPSRSVNIIHNTEHPATCFALLDTG--------------LCLVADLTF 90
Query: 63 DLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+LM+KM +Y+ KK TK+E+KGPR+E+ DF VK+GSVS+ +F+ +LVEV
Sbjct: 91 DMLMLKMAGIYSPKKSTKMEAKGPRYEVADFLVKVGSVSMGPSFRGILVEVE 142
>gi|332016297|gb|EGI57210.1| Trans-2,3-enoyl-CoA reductase [Acromyrmex echinatior]
Length = 394
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 46/49 (93%)
Query: 66 MMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
MMKMT +YTSKKQTK+ESKGPRFE+GDFCVKLGSV++SQNFK VLVEV
Sbjct: 1 MMKMTTIYTSKKQTKIESKGPRFEIGDFCVKLGSVTMSQNFKGVLVEVE 49
>gi|427781717|gb|JAA56310.1| Putative transcription mediator-related factor [Rhipicephalus
pulchellus]
Length = 210
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 70/102 (68%), Gaps = 14/102 (13%)
Query: 13 HLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPV 72
++ +V+++H++E PA+ F++L++G + +VAD FD+LM+KM +
Sbjct: 51 NINPSHSVNIIHDTEHPATCFALLDTG--------------MCLVADITFDMLMLKMAGI 96
Query: 73 YTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
Y++KK TK+ES+GPR+E+ DF VK+GSVS+ +F+ +LVEV
Sbjct: 97 YSAKKSTKIESRGPRYEVADFLVKVGSVSMGPSFRGILVEVE 138
>gi|307191149|gb|EFN74847.1| Mediator of RNA polymerase II transcription subunit 20 [Camponotus
floridanus]
Length = 114
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/48 (81%), Positives = 46/48 (95%)
Query: 66 MMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
M+KMT +YTSKKQTK+ESKGPRFE+GDFCVKLGSV++SQNFK +LVEV
Sbjct: 1 MLKMTNIYTSKKQTKIESKGPRFEIGDFCVKLGSVTMSQNFKGILVEV 48
>gi|391326585|ref|XP_003737793.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Metaseiulus occidentalis]
Length = 225
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 15/98 (15%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTP-VYTSK 76
+T HVLH+SE PASVFS+LESG + +VAD+ FD LM K+TP ++T+K
Sbjct: 53 RTQHVLHDSEHPASVFSLLESG--------------LCLVADANFDSLMNKLTPQLFTTK 98
Query: 77 KQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
TKVE KGPR+++ DF +K+G+V+I + + +LVE
Sbjct: 99 MGTKVECKGPRYQVEDFVLKVGTVTIGTSARGLLVECE 136
>gi|291244972|ref|XP_002742364.1| PREDICTED: Trf-proximal protein homolog [Saccoglossus kowalevskii]
Length = 210
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 10/98 (10%)
Query: 17 QKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSK 76
QKTVH++HNSEQP + ++++E GPG + + VAD++FD +M ++ Y K
Sbjct: 55 QKTVHIIHNSEQPMTSYAVME-----GPGSAANCL-----VADTMFDQIMQRLKGFYMPK 104
Query: 77 KQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
K KVESKG +ELGDF VK+G+V++ + K +L+E+
Sbjct: 105 KTPKVESKGQHYELGDFNVKIGTVTLGGHAKGILLEIE 142
>gi|405969414|gb|EKC34387.1| Mediator of RNA polymerase II transcription subunit 20 [Crassostrea
gigas]
Length = 217
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 21/119 (17%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TY + Q V++LHNSE PAS FS+ ESG +V+D LF
Sbjct: 45 TYQSNPQNVTQTPQQCVVNILHNSEHPASCFSVTESGQI--------------LVSDLLF 90
Query: 63 DLLMMKMT-------PVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
+ LM K+T Y+ +K K+ES+G R+E+GDF +K+GSVS++ NF+ +L+EV
Sbjct: 91 EDLMSKLTMAKAGRESFYSQRKGFKIESRGQRYEVGDFIIKIGSVSLASNFRGILIEVE 149
>gi|391343081|ref|XP_003745842.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Metaseiulus occidentalis]
Length = 225
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 15/105 (14%)
Query: 11 YAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMT 70
Y ++ + HVLH+SE PASVFS+LESG + +VAD+ FD LM K+
Sbjct: 46 YQNVSMGRFQHVLHDSEHPASVFSLLESG--------------LCLVADANFDSLMNKLN 91
Query: 71 P-VYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
P ++T+K TKVE KGPR+++ DF +K+G+V+I + + +LVE
Sbjct: 92 PQLFTTKIGTKVECKGPRYQVEDFILKIGTVTIGTSARGLLVECE 136
>gi|443724231|gb|ELU12343.1| hypothetical protein CAPTEDRAFT_220200 [Capitella teleta]
Length = 229
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 66/116 (56%), Gaps = 17/116 (14%)
Query: 2 FTYHAGT-GRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADS 60
FT T G Y + +++LHNSEQPA+ F++L+SG +VAD
Sbjct: 58 FTVDCETYGTYQQTSQPQHINILHNSEQPATCFAVLDSGNC--------------LVADL 103
Query: 61 LFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQ--NFKAVLVEVR 114
FD LM K+ Y KK +VE+KG R+E GDF +K+GSV + Q +FK V+VEV
Sbjct: 104 QFDALMNKIKMFYIQKKNARVEAKGLRYEYGDFIIKVGSVVLGQSTSFKGVIVEVE 159
>gi|156396612|ref|XP_001637487.1| predicted protein [Nematostella vectensis]
gi|156224599|gb|EDO45424.1| predicted protein [Nematostella vectensis]
Length = 187
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 17/112 (15%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TY A + H S K +H++H++E P S F +LESG +VA + F
Sbjct: 27 TYQATS---LHTSSSKVLHLVHSTEHPYSSFVVLESGTC--------------LVAQTGF 69
Query: 63 DLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D LM+++ YT +K K+E KGP +E GDF +K+G +S+ + K VL+EV
Sbjct: 70 DSLMVRLKAFYTQRKAAKIEVKGPSYEYGDFILKIGQISLGPSVKGVLIEVE 121
>gi|37805372|gb|AAH60122.1| Med20 protein [Mus musculus]
Length = 145
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEVR
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVR 143
>gi|444725486|gb|ELW66050.1| Mediator of RNA polymerase II transcription subunit 20 [Tupaia
chinensis]
Length = 378
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 71/120 (59%), Gaps = 21/120 (17%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ ESG P ++A
Sbjct: 37 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFESG-------PC-------LIA 79
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVRTSKG 118
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VE+ ++G
Sbjct: 80 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEMPVAEG 139
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ ESG P ++A
Sbjct: 170 TYHTAA---STLGSQGQARKLMYVMHNSEYPLSCFALFESG-------PC-------LIA 212
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 213 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 268
>gi|449490623|ref|XP_004177142.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 20 [Taeniopygia guttata]
Length = 251
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 22/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH A LG+Q K ++V+HNSE P S F++ E+G P +VA
Sbjct: 85 TYHTA----ATLGTQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LVA 126
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD LM+K+ + + K K+ES+G R++ DF VKLG+V++ + + + VEV
Sbjct: 127 DANFDTLMVKLKGFFQNAKANKIESRGTRYQYCDFLVKLGTVTMGPSARGISVEVE 182
>gi|157074102|ref|NP_001096763.1| mediator of RNA polymerase II transcription subunit 20 [Bos taurus]
gi|426250277|ref|XP_004018864.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Ovis aries]
gi|148877305|gb|AAI46259.1| MED20 protein [Bos taurus]
gi|296474440|tpg|DAA16555.1| TPA: mediator complex subunit 20 [Bos taurus]
Length = 212
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P +VA
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LVA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|329744613|ref|NP_001193281.1| mediator of RNA polymerase II transcription subunit 20 [Sus scrofa]
Length = 212
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEHPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|440911226|gb|ELR60926.1| Mediator of RNA polymerase II transcription subunit 20, partial
[Bos grunniens mutus]
Length = 207
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P +VA
Sbjct: 40 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LVA 82
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 83 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 138
>gi|403261267|ref|XP_003923046.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Saimiri boliviensis boliviensis]
Length = 273
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 21/115 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 106 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 148
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 149 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEV 203
>gi|190576565|gb|ACE79056.1| MED20 protein (predicted) [Sorex araneus]
Length = 204
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 21/115 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P +VA
Sbjct: 37 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LVA 79
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 80 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEV 134
>gi|149732185|ref|XP_001501272.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Equus caballus]
Length = 212
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAS---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|426353135|ref|XP_004044054.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Gorilla gorilla gorilla]
Length = 305
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 21/115 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 138 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 180
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 181 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEV 235
>gi|410959166|ref|XP_003986183.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Felis catus]
Length = 212
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|149069451|gb|EDM18892.1| rCG43485, isoform CRA_c [Rattus norvegicus]
Length = 150
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 21/115 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEV 142
>gi|201066433|gb|ACH92566.1| Trf-proximal homolog (predicted) [Otolemur garnettii]
Length = 204
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 37 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 79
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 80 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 135
>gi|9910590|ref|NP_064432.1| mediator of RNA polymerase II transcription subunit 20 [Mus
musculus]
gi|29428269|sp|Q9R0X0.1|MED20_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20; AltName:
Full=TRF-proximal protein homolog
gi|5777876|emb|CAB53514.1| Trf-proximal protein [Mus musculus]
gi|26335671|dbj|BAC31536.1| unnamed protein product [Mus musculus]
gi|74226909|dbj|BAE27098.1| unnamed protein product [Mus musculus]
gi|148691629|gb|EDL23576.1| Trf (TATA binding protein-related factor)-proximal protein homolog
(Drosophila), isoform CRA_b [Mus musculus]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|30023851|ref|NP_004266.2| mediator of RNA polymerase II transcription subunit 20 [Homo
sapiens]
gi|350536321|ref|NP_001233419.1| mediator of RNA polymerase II transcription subunit 20 [Pan
troglodytes]
gi|297678109|ref|XP_002816923.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
isoform 1 [Pongo abelii]
gi|332234265|ref|XP_003266331.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Nomascus leucogenys]
gi|397526903|ref|XP_003833354.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Pan paniscus]
gi|29428258|sp|Q9H944.1|MED20_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20; AltName:
Full=TRF-proximal protein homolog; Short=hTRFP
gi|10434852|dbj|BAB14399.1| unnamed protein product [Homo sapiens]
gi|18044732|gb|AAH19866.1| Mediator complex subunit 20 [Homo sapiens]
gi|26454864|gb|AAH40950.1| Mediator complex subunit 20 [Homo sapiens]
gi|45708414|gb|AAH12618.1| Mediator complex subunit 20 [Homo sapiens]
gi|45710110|gb|AAH32552.1| Mediator complex subunit 20 [Homo sapiens]
gi|119624472|gb|EAX04067.1| Trf (TATA binding protein-related factor)-proximal homolog
(Drosophila), isoform CRA_a [Homo sapiens]
gi|167774051|gb|ABZ92460.1| mediator complex subunit 20 [synthetic construct]
gi|208966722|dbj|BAG73375.1| mediator complex subunit 20 [synthetic construct]
gi|343959372|dbj|BAK63543.1| TRF-proximal protein homolog [Pan troglodytes]
gi|380783581|gb|AFE63666.1| mediator of RNA polymerase II transcription subunit 20 [Macaca
mulatta]
gi|383414063|gb|AFH30245.1| mediator of RNA polymerase II transcription subunit 20 [Macaca
mulatta]
gi|384950458|gb|AFI38834.1| mediator of RNA polymerase II transcription subunit 20 [Macaca
mulatta]
gi|410246960|gb|JAA11447.1| mediator complex subunit 20 [Pan troglodytes]
gi|410287990|gb|JAA22595.1| mediator complex subunit 20 [Pan troglodytes]
gi|410329249|gb|JAA33571.1| mediator complex subunit 20 [Pan troglodytes]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|75075800|sp|Q4R4S8.1|MED20_MACFA RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20; AltName:
Full=TRF-proximal protein homolog
gi|67971110|dbj|BAE01897.1| unnamed protein product [Macaca fascicularis]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|395832343|ref|XP_003789231.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Otolemur garnettii]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|345778757|ref|XP_538917.3| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Canis lupus familiaris]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|355561689|gb|EHH18321.1| hypothetical protein EGK_14895 [Macaca mulatta]
Length = 204
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 37 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 79
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 80 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 135
>gi|431838378|gb|ELK00310.1| Mediator of RNA polymerase II transcription subunit 20 [Pteropus
alecto]
Length = 275
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 108 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 150
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 151 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 206
>gi|291396190|ref|XP_002714442.1| PREDICTED: Trf-proximal protein homolog [Oryctolagus cuniculus]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|417397199|gb|JAA45633.1| Putative mediator of rna polymerase ii transcription subunit
20-like isoform 1 [Desmodus rotundus]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|167206807|gb|ABZ11038.1| Trf-proximal homolog (predicted) [Callithrix jacchus]
Length = 204
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 37 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 79
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 80 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 135
>gi|61557196|ref|NP_001013196.1| mediator of RNA polymerase II transcription subunit 20 [Rattus
norvegicus]
gi|81883761|sp|Q5XIE9.1|MED20_RAT RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20; AltName:
Full=TRF-proximal protein homolog
gi|53734254|gb|AAH83734.1| Mediator complex subunit 20 [Rattus norvegicus]
gi|149069450|gb|EDM18891.1| rCG43485, isoform CRA_b [Rattus norvegicus]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|355748556|gb|EHH53039.1| hypothetical protein EGM_13597, partial [Macaca fascicularis]
Length = 210
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 43 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 85
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 86 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 141
>gi|148691628|gb|EDL23575.1| Trf (TATA binding protein-related factor)-proximal protein homolog
(Drosophila), isoform CRA_a [Mus musculus]
Length = 150
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 21/115 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEV 142
>gi|301757412|ref|XP_002914535.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Ailuropoda melanoleuca]
Length = 212
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG----PW----------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|281345746|gb|EFB21330.1| hypothetical protein PANDA_002455 [Ailuropoda melanoleuca]
Length = 207
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 40 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG----PW----------LIA 82
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 83 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 138
>gi|355701770|gb|AES01787.1| mediator complex subunit 20 [Mustela putorius furo]
Length = 207
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 40 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG----PW----------LIA 82
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 83 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 138
>gi|344263763|ref|XP_003403965.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Loxodonta africana]
Length = 212
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+H+SE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHDSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGTSARGISVEVE 143
>gi|327271199|ref|XP_003220375.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Anolis carolinensis]
Length = 212
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 15/113 (13%)
Query: 3 TYHAGTGRYAHLG-SQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSL 61
TYH + G + K ++V+HNSE P S F++ E+G P ++AD+
Sbjct: 45 TYHTAASTMGNQGQTAKLMYVMHNSEYPLSCFALFENG-------PC-------LIADAN 90
Query: 62 FDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
FD+LM+K+ + + K K+ES+G R++ DF VK+G+V++ + + + VEV
Sbjct: 91 FDVLMVKLKGFFQNAKGNKIESRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|348576280|ref|XP_003473915.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Cavia porcellus]
Length = 212
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P + A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LTA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|351707915|gb|EHB10834.1| Mediator of RNA polymerase II transcription subunit 20
[Heterocephalus glaber]
Length = 204
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P + A
Sbjct: 37 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LTA 79
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 80 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 135
>gi|281183222|ref|NP_001162222.1| mediator of RNA polymerase II transcription subunit 20 [Papio
anubis]
gi|157939801|gb|ABW05540.1| mediator complex subunit 20 (predicted) [Papio anubis]
Length = 204
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P + A
Sbjct: 37 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LTA 79
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 80 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 135
>gi|339521953|gb|AEJ84141.1| mediator of RNA polymerase II transcription subunit 20 [Capra
hircus]
Length = 212
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 21/114 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P +VA
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LVA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVE 112
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VE
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYYDFLVKVGTVTMGPSARGISVE 141
>gi|57530514|ref|NP_001006327.1| mediator of RNA polymerase II transcription subunit 20 [Gallus
gallus]
gi|82082346|sp|Q5ZKY9.1|MED20_CHICK RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20; AltName:
Full=TRF-proximal protein homolog
gi|53130550|emb|CAG31604.1| hypothetical protein RCJMB04_8k10 [Gallus gallus]
Length = 211
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 14/112 (12%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TYH + + K ++V+HNSE P S F++ E+G P ++AD+ F
Sbjct: 45 TYHTAAAISSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIADANF 90
Query: 63 DLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D LM+K+ + + K K+ES+G R++ DF VK+G+V++ + + + VEV
Sbjct: 91 DTLMVKLKGFFQNAKANKIESRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 142
>gi|126309859|ref|XP_001370564.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Monodelphis domestica]
Length = 212
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + +GSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STMGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + + K K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DANFDVLMVKLKGFFQNAKANKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|395534137|ref|XP_003769104.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Sarcophilus harrisii]
Length = 212
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + +GSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STMGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + + K K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DANFDVLMVKLKGFFQNAKANKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|57525779|ref|NP_001003585.1| mediator of RNA polymerase II transcription subunit 20 [Danio
rerio]
gi|82182115|sp|Q6DBX1.1|MED20_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20; AltName:
Full=TRF-proximal protein homolog
gi|50417243|gb|AAH78327.1| Mediator complex subunit 20 [Danio rerio]
Length = 212
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 16/112 (14%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TYHA TG S K ++V+HNSE P S ++ E GGPG + AD+ F
Sbjct: 45 TYHA-TGNATGQPS-KLLYVMHNSEAPLSCMALFE----GGPG----------LSADANF 88
Query: 63 DLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+LM+K+ + + K KVES+G R+ DF VK+G+V++S + + + VEV
Sbjct: 89 DVLMIKLKSHFQNAKGHKVESRGTRYRYCDFLVKIGTVAMSSSARGISVEVE 140
>gi|318054185|ref|NP_001187442.1| mediator of RNA polymerase II transcription subunit 20 [Ictalurus
punctatus]
gi|308323017|gb|ADO28646.1| mediator of RNA polymerase II transcription subunit 20 [Ictalurus
punctatus]
Length = 212
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 16/114 (14%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TYHA T A K ++V+HNSE P S + + GGP+ A AD+ F
Sbjct: 45 TYHATTNTGAQ--PSKLLYVMHNSETPLSCLVLFD-------GGPTLA-------ADANF 88
Query: 63 DLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVRTS 116
D+LM+K+ + + K KVES+G R+ DF +K+G+V++S + + + VEV S
Sbjct: 89 DVLMVKLKSHFQNAKGHKVESRGARYRYADFLIKVGTVTMSSSARGISVEVEYS 142
>gi|260800037|ref|XP_002594943.1| hypothetical protein BRAFLDRAFT_286465 [Branchiostoma floridae]
gi|229280181|gb|EEN50954.1| hypothetical protein BRAFLDRAFT_286465 [Branchiostoma floridae]
Length = 204
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 16/99 (16%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
KT HV+H++ P + F+I++SG +VADS FD LM K+ Y +K
Sbjct: 56 KTAHVMHSTGHPLTCFAIMDSGTC--------------LVADSNFDQLMTKLKGFYAPRK 101
Query: 78 QTKVESKGPRFELGDFCVKLGSVSI--SQNFKAVLVEVR 114
K+E KGPR+E DF VK+G+V+ + + + +LVEV
Sbjct: 102 GAKIEVKGPRYEYVDFIVKIGTVTTGPTASSRGILVEVE 140
>gi|410919597|ref|XP_003973270.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Takifugu rubripes]
Length = 211
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 20/114 (17%)
Query: 3 TYHAGTGRYAHLGSQ--KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADS 60
TYHA A++G Q K ++V+HN+E P S F++ E GGP + AD+
Sbjct: 45 TYHAT----ANVGGQQSKLLYVMHNTETPLSCFALFE-------GGPC-------LKADT 86
Query: 61 LFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
FD+LM+K+ + + K KVE +G R+ DF +K+G+V++S + + + VEV
Sbjct: 87 NFDILMVKLKSHFQNAKGYKVECRGSRYRYCDFLIKVGTVTMSSSARGISVEVE 140
>gi|348507885|ref|XP_003441486.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Oreochromis niloticus]
Length = 211
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 16/112 (14%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TYHA TG + S K ++V+HNSE P S ++ E GGP ++AD+ F
Sbjct: 45 TYHA-TGNSSSQPS-KLLYVMHNSETPLSCLALFE-------GGPC-------LIADANF 88
Query: 63 DLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+LM+K+ + + K KVES+G R+ DF +K+G+V++S + + + VEV
Sbjct: 89 DVLMVKLKSHFQNAKGHKVESRGSRYRYCDFLIKVGTVTMSSSARGISVEVE 140
>gi|296198145|ref|XP_002746580.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Callithrix jacchus]
Length = 217
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 20/118 (16%)
Query: 3 TYHA-----GTGRYAHLGSQ-KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPV 56
TYH G+ + + +G K ++V+HNSE P S F++ E+G P +
Sbjct: 45 TYHTAASTLGSPKVSDMGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------L 90
Query: 57 VADSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
+AD+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 91 IADTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 148
>gi|449271600|gb|EMC81884.1| Mediator of RNA polymerase II transcription subunit 20, partial
[Columba livia]
Length = 162
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 59/97 (60%), Gaps = 14/97 (14%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
K ++V+HNSE P S F++ E+G P ++AD+ FD+LM+K+ + + K
Sbjct: 11 KLMYVMHNSEYPLSCFALFENG-------PC-------LIADANFDILMVKLKGFFQNAK 56
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
K+ES+G R++ DF VK+G+V++ + + + VEV
Sbjct: 57 ANKIESRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 93
>gi|149447131|ref|XP_001520012.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like, partial [Ornithorhynchus anatinus]
Length = 84
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 60/95 (63%), Gaps = 14/95 (14%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
K ++V+HNSE P S F++ ESG P ++AD+ FD+LM+K+ + + K
Sbjct: 4 KLMYVMHNSEFPLSCFALFESG-------PC-------LIADANFDVLMVKLRGFFQNAK 49
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVE 112
+K+E++G R++L DF VK+G+V++ + + + VE
Sbjct: 50 ASKIETRGTRYQLCDFLVKVGTVTMGPSARGISVE 84
>gi|226372056|gb|ACO51653.1| Mediator of RNA polymerase II transcription subunit 20 [Rana
catesbeiana]
Length = 213
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 3 TYHAGTGRYAHLGSQ-KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSL 61
TYH G K ++++H SE P S F++ E+G P +VAD
Sbjct: 45 TYHTAGANVGTTGQPGKLLYIMHGSEHPLSTFALFENG-------PC-------LVADQN 90
Query: 62 FDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
FD+LM+K+ + + K K+E++G R++ DF VK+G+V++ Q+ + + VEV
Sbjct: 91 FDVLMIKLKGFFQNAKANKMETRGTRYQYCDFLVKIGTVTMGQSGRGISVEV 142
>gi|4323033|gb|AAD16169.1| TRF-proximal protein [Homo sapiens]
Length = 209
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 21/104 (20%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSI 102
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTM 131
>gi|148233699|ref|NP_001084734.1| mediator of RNA polymerase II transcription subunit 20 [Xenopus
laevis]
gi|82185442|sp|Q6NTV8.1|MED20_XENLA RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20; AltName:
Full=TRF-proximal protein homolog
gi|46329737|gb|AAH68846.1| MGC81505 protein [Xenopus laevis]
Length = 211
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 3 TYHAGTGRYAHLGSQ-KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSL 61
TYH G K ++V+HNSE P S F++ E+G P +VAD
Sbjct: 45 TYHTAGASMGTPGQAGKLLYVMHNSEYPLSTFALFENG-------PC-------LVADLN 90
Query: 62 FDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
D+LM+K+ + + K K+E++G R++ DF VK+G+V++ Q+ + + VEV
Sbjct: 91 LDVLMVKLKGFFQNAKANKMETRGTRYQYCDFLVKIGTVTVGQSGRGITVEV 142
>gi|432856726|ref|XP_004068507.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Oryzias latipes]
Length = 211
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 16/112 (14%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TYHA TG S K ++V+HNSE P S ++ E GGP +VAD+ F
Sbjct: 45 TYHA-TGNVVGQPS-KLLYVMHNSETPLSCMALFE-------GGPY-------LVADANF 88
Query: 63 DLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+LM K+ + + K KVES+G R+ DF +K+G+V++S + + + VEV
Sbjct: 89 DVLMSKLKSHFQNAKGHKVESRGSRYRYCDFLIKVGTVTMSSSARGISVEVE 140
>gi|160774152|gb|AAI55507.1| LOC100127863 protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 3 TYHAGTGRYAHLGSQ-KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSL 61
TYH G K ++V+HNSE P S F++ E+G P +VAD
Sbjct: 39 TYHTAGASMGTPGQAGKLLYVMHNSEYPLSTFALFENG-------PC-------LVADLN 84
Query: 62 FDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
D+LM+K+ + + K K+E++G R++ DF VK+G+V++ Q+ + + VEV
Sbjct: 85 LDVLMVKLKGFFQNAKANKMETRGTRYQYCDFLVKIGTVTVGQSGRGITVEV 136
>gi|119624473|gb|EAX04068.1| Trf (TATA binding protein-related factor)-proximal homolog
(Drosophila), isoform CRA_b [Homo sapiens]
gi|193783550|dbj|BAG53461.1| unnamed protein product [Homo sapiens]
gi|194373925|dbj|BAG62275.1| unnamed protein product [Homo sapiens]
Length = 150
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 59/95 (62%), Gaps = 14/95 (14%)
Query: 20 VHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKKQT 79
++V+HNSE P S F++ E+G P ++AD+ FD+LM+K+ + S K +
Sbjct: 1 MYVMHNSEYPLSCFALFENG-------PC-------LIADTNFDVLMVKLKGFFQSAKAS 46
Query: 80 KVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 47 KIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 81
>gi|213512725|ref|NP_001134355.1| mediator of RNA polymerase II transcription subunit 20 [Salmo
salar]
gi|209732646|gb|ACI67192.1| Mediator of RNA polymerase II transcription subunit 20 [Salmo
salar]
Length = 211
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 16/112 (14%)
Query: 3 TYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLF 62
TYHA TG A K ++V+HNSE P S ++ E GGP + AD F
Sbjct: 45 TYHA-TGN-ASGQPTKLLYVMHNSETPLSCLALFE-------GGPC-------LTADGNF 88
Query: 63 DLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+LM+K+ + + K KVES+G R+ DF +K+G+V++S + + + VEV
Sbjct: 89 DVLMIKLKSHFQNAKGHKVESRGSRYRYCDFLIKVGAVTMSSSARGISVEVE 140
>gi|198414922|ref|XP_002130007.1| PREDICTED: similar to Mediator of RNA polymerase II transcription
subunit 20 (Mediator complex subunit 20) (TRF-proximal
protein homolog) [Ciona intestinalis]
Length = 202
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 14/114 (12%)
Query: 1 MFTYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADS 60
+FT + ++ + KT+H++H++E PAS F+ E G PS +V+D
Sbjct: 38 LFTVECESYHAVNVANSKTLHLIHSTEYPASRFACFEDG-------PS-------IVSDV 83
Query: 61 LFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
+ + K+ V+ +K ++ESKG R+ELGDF +K G +S+ + K + +EV
Sbjct: 84 MLPSFLSKLRSVWQPRKGGRIESKGHRYELGDFVLKTGIISMGPSTKGISLEVE 137
>gi|354493827|ref|XP_003509041.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Cricetulus griseus]
Length = 212
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G ++ DF VK G+V++ + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFPSAKASKIETRGTCYQYCDFLVKEGTVTMGPSAHGISVEVE 143
>gi|344238309|gb|EGV94412.1| Mediator of RNA polymerase II transcription subunit 20 [Cricetulus
griseus]
Length = 204
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 37 TYHTAA---STLGSQGQAGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 79
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G ++ DF VK G+V++ + + VEV
Sbjct: 80 DTNFDVLMVKLKGFFPSAKASKIETRGTCYQYCDFLVKEGTVTMGPSAHGISVEVE 135
>gi|47229641|emb|CAG06837.1| unnamed protein product [Tetraodon nigroviridis]
Length = 211
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 16/105 (15%)
Query: 12 AHLGSQ--KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKM 69
A +G Q K ++V+HN+E P S F++ E GGP + AD+ FD+LM+K+
Sbjct: 50 ASVGGQPSKLLYVMHNTETPLSCFALFE-------GGPC-------LKADTNFDILMVKL 95
Query: 70 TPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
+ + K KVE +G R+ DF +K+G+V+++ + + + VEV
Sbjct: 96 KSHFQNAKGHKVECRGSRYRYCDFLIKVGTVTMNSSARGISVEVE 140
>gi|344247193|gb|EGW03297.1| Mediator of RNA polymerase II transcription subunit 20 [Cricetulus
griseus]
Length = 136
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 14/95 (14%)
Query: 20 VHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKKQT 79
++V+HNSE P S F++ E+G P ++AD+ FD+LM+K+ + S K +
Sbjct: 1 MYVMHNSEYPLSCFALFENG-------PC-------LIADTNFDVLMVKLKGFFQSAKAS 46
Query: 80 KVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
K+E++G ++ DF VK G+V++ + + VEVR
Sbjct: 47 KIETRGTCYQYCDFLVKEGTVTMGPSAHGISVEVR 81
>gi|109071146|ref|XP_001085725.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Macaca mulatta]
Length = 212
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 21/116 (18%)
Query: 3 TYHAGTGRYAHLGSQKT----VHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ ++V+HNSE S ++ E+G P +A
Sbjct: 45 TYHTAA---STLGSQGQPGILMYVMHNSEGGGSYIALFENG-------PC-------FIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
D+ FD+LM+K+ + S K +K+E++G R++ DF VK+G+V++ + + + VEV
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRYQYCDFLVKVGTVTMGPSARGISVEVE 143
>gi|301606842|ref|XP_002933024.1| PREDICTED: mediator of RNA polymerase II transcription subunit 20
[Xenopus (Silurana) tropicalis]
Length = 146
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 14/91 (15%)
Query: 23 LHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKKQTKVE 82
+HNSE P S F++ E+G P +VAD D+LM+K+ + + K K+E
Sbjct: 1 MHNSEYPLSTFALFENG-------PC-------LVADLNLDVLMVKLKGFFQNAKANKME 46
Query: 83 SKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
++G R++ DF VK+G+V++ Q+ + + VEV
Sbjct: 47 TRGTRYQYCDFLVKIGTVTVGQSGRGITVEV 77
>gi|354507219|ref|XP_003515654.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like, partial [Cricetulus griseus]
Length = 115
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 14/95 (14%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
K ++V+HNSE P S F++ E+G P ++AD+ FD+LM+K+ + S K
Sbjct: 35 KLMYVMHNSEYPLSCFALFENG-------PC-------LIADTNFDVLMVKLKGFFQSAK 80
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVE 112
+K+E++G ++ DF VK G+V++ + + VE
Sbjct: 81 ASKIETRGTCYQYCDFLVKEGTVTMGPSAHGISVE 115
>gi|449676619|ref|XP_002163639.2| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Hydra magnipapillata]
Length = 202
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 58/96 (60%), Gaps = 14/96 (14%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
K +++H+SE P+ FS+LE+ + VVA++ + ++ K++ Y +K
Sbjct: 58 KMFYLMHSSECPSLSFSLLEN--------------DTCVVAENSINSIISKLSDFYLPRK 103
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
+K E+KG RF LGDF +K+G+++ + +FK V+ E+
Sbjct: 104 GSKTEAKGSRFTLGDFIIKIGTITQASSFKGVVAEI 139
>gi|327259166|ref|XP_003214409.1| PREDICTED: mediator of RNA polymerase II transcription subunit
20-like [Anolis carolinensis]
Length = 219
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 30/124 (24%)
Query: 3 TYHAGTGRYAHLGSQ-----------KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAV 51
TYH A +G+Q K ++V+HNSE P S FS+ E+G
Sbjct: 45 TYHTAA---ATMGNQVFFSTHQGQTAKLMYVMHNSEYPLSCFSLFENG------------ 89
Query: 52 KNIPVV-ADSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVL 110
P + +D+ D+LM+K+ + + K K+ES+G R++ DF VK+G+V+I + +
Sbjct: 90 ---PCLKSDANCDVLMVKLKGFFQNTKGNKIESQGTRYQYCDFLVKVGTVTIGPSVLGIS 146
Query: 111 VEVR 114
VE
Sbjct: 147 VEAE 150
>gi|344250706|gb|EGW06810.1| Mediator of RNA polymerase II transcription subunit 20 [Cricetulus
griseus]
Length = 138
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 14/95 (14%)
Query: 20 VHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKKQT 79
++V+HNSE P S F++ E+G P ++AD+ FD+LM+K+ + S K +
Sbjct: 1 MYVMHNSEYPLSCFALFENG-------PC-------LIADTNFDVLMVKLKGFFQSAKAS 46
Query: 80 KVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
K+E++ ++ DF VK G+V++ + + VE
Sbjct: 47 KIETRSTCYQYCDFLVKEGTVTMGPSAHGISVEAE 81
>gi|194373647|dbj|BAG56919.1| unnamed protein product [Homo sapiens]
Length = 123
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 21/93 (22%)
Query: 3 TYHAGTGRYAHLGSQ----KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVA 58
TYH + LGSQ K ++V+HNSE P S F++ E+G P ++A
Sbjct: 45 TYHTAA---STLGSQGQTGKLMYVMHNSEYPLSCFALFENG-------PC-------LIA 87
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELG 91
D+ FD+LM+K+ + S K +K+E++G R+ +
Sbjct: 88 DTNFDVLMVKLKGFFQSAKASKIETRGTRWSMA 120
>gi|313221231|emb|CBY43685.1| unnamed protein product [Oikopleura dioica]
Length = 219
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 2 FTYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSL 61
F Y + + + + + + L SE P +VF+ ++ S KN + DS
Sbjct: 39 FYYESKFYQASDSATTRDFYTLKTSEYPVTVFARVDD---------STKDKNSCIQCDSP 89
Query: 62 FDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
+ L++K+ +T K+ E +G RF+L DF ++ G V+ S + K V +E+
Sbjct: 90 MESLLVKLREFFTPKR--TFEIRGTRFKLADFWIRPGIVTSSGSNKCVTIEIE 140
>gi|313221227|emb|CBY43680.1| unnamed protein product [Oikopleura dioica]
gi|313231621|emb|CBY08734.1| unnamed protein product [Oikopleura dioica]
Length = 219
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 2 FTYHAGTGRYAHLGSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSL 61
F Y + + + + + + L SE P +VF+ ++ S KN + DS
Sbjct: 39 FYYESKFYQASDSATTRDFYTLKTSEYPVTVFARVDD---------STKDKNSCIQCDSP 89
Query: 62 FDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
+ L++K+ +T K+ E +G RF+L DF ++ G V+ S + K V +E+
Sbjct: 90 MESLLVKLREFFTPKR--TFEIRGTRFKLADFWIRPGIVTSSGSNKCVTIEI 139
>gi|320169816|gb|EFW46715.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 262
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 59 DSLFDLLMMKMTPVYTSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
D F+ +M + VY ++ ++E G R+++GDF V++GSV +SQ + + VEV
Sbjct: 146 DKEFEAVMGWLKTVYQERRPVRIE--GSRYDIGDFSVRVGSVIVSQQPRGIAVEV 198
>gi|402591273|gb|EJW85203.1| hypothetical protein WUBG_03887 [Wuchereria bancrofti]
Length = 197
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 15 GSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIP-VVADSLFDLLMMKMTPVY 73
G+ V +LH+S P S F+I P+ K+ P ++D FD ++ K++
Sbjct: 46 GAINHVFILHHSRFPQSTFTI----------APNEKQKHCPRAISDRGFDCILAKLSSGL 95
Query: 74 TSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
K E G + L DF ++ G+ S+ K V+VEV
Sbjct: 96 VQDTAGKFEVSGHEYTLQDFIIRTGNASMGVISKGVIVEVE 136
>gi|324515410|gb|ADY46193.1| Mediator of RNA polymerase II transcription subunit 20 [Ascaris
suum]
Length = 198
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 15 GSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIP-VVADSLFDLLMMKMTPVY 73
G+ V +LH+S P S F+I + VK P V+D FDL++ K++
Sbjct: 46 GAINHVFILHHSHYPHSTFTIAPT---------ERQVKMCPRAVSDRGFDLILSKLSSGL 96
Query: 74 TSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
K E G F L DF +++G+ ++ K V+VEV
Sbjct: 97 VQDVAGKFEVSGSEFVLKDFMIRVGNATMGVVSKGVIVEV 136
>gi|312094904|ref|XP_003148182.1| mediator protein 20 [Loa loa]
gi|307756654|gb|EFO15888.1| mediator protein 20 [Loa loa]
Length = 197
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 15 GSQKTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIP-VVADSLFDLLMMKMTPVY 73
G+ V +LH+S P S F+I P+ K+ P ++D FD ++ K++
Sbjct: 46 GAINHVFILHHSRFPQSTFTI----------APNEKQKHCPRAISDRGFDCILAKLSSGL 95
Query: 74 TSKKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
K E G + L DF ++ G+ S+ K V+VEV
Sbjct: 96 VQDTAGKFEVSGHEYVLQDFIIRTGNASMGVISKGVIVEVE 136
>gi|358338545|dbj|GAA56955.1| mediator of RNA polymerase II transcription subunit 20 [Clonorchis
sinensis]
Length = 391
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
K VL ++E PAS F ++ N +VAD F + Y KK
Sbjct: 168 KNFQVLTSTEFPASCFVFTDN--------------NTLLVADLAFREFAGYLRASYQRKK 213
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQ--NFKAVLVEV 113
+ +VE KG ++ LGDF + ++ + Q N + L+EV
Sbjct: 214 KLQVEGKGMKYRLGDFGINFVTLFMGQSANVRGYLIEV 251
>gi|256078689|ref|XP_002575627.1| hypothetical protein [Schistosoma mansoni]
gi|353231983|emb|CCD79338.1| hypothetical protein Smp_042780 [Schistosoma mansoni]
Length = 278
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
KT VL ++E PAS F ++ +VAD F + Y KK
Sbjct: 57 KTFQVLTSTEYPASCFVFSDNQTA--------------LVADISFREFPGCLKAFYQRKK 102
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQ--NFKAVLVEV 113
+ +VE+KG +++LGDF + ++ + Q + K L+EV
Sbjct: 103 KLQVEAKGIKYQLGDFTINFITIFMGQSASVKGYLIEV 140
>gi|308455629|ref|XP_003090335.1| CRE-MDT-20 protein [Caenorhabditis remanei]
gi|308264633|gb|EFP08586.1| CRE-MDT-20 protein [Caenorhabditis remanei]
Length = 198
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 22 VLHNSEQPASVFSILESGVPGGPGGPSGAVKNIP-VVADSLFDLLMMKMTPVYTSKKQTK 80
V+H+S+ P S FSI P G K P V D FDL+M K++ K
Sbjct: 52 VMHHSKCPQSTFSIC----------PKGDFKKSPKAVCDRGFDLIMSKLSAGLLIDNAGK 101
Query: 81 VESKGPRFEL-GDFCVKLGSVSISQNFKAVLVEVR 114
+E G F L D+ ++G+ K +VE+
Sbjct: 102 IEINGNEFRLHSDWTARVGTAVQGTTVKGTIVEIE 136
>gi|226480878|emb|CAX73536.1| TBC1 domain family member 8 (Vascular Rab-GAP/TBC-containing
protein) [Schistosoma japonicum]
Length = 294
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
KT VL ++E PAS F ++ +VAD F + Y KK
Sbjct: 73 KTFQVLTSTEFPASCFIFSDNQTA--------------LVADISFREFPGCLKAFYQRKK 118
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQ--NFKAVLVEV 113
+ +VE+KG +++LGDF V ++ + Q + K L+EV
Sbjct: 119 KLQVEAKGIKYQLGDFTVSFITLFMGQSASVKGYLIEV 156
>gi|56756280|gb|AAW26315.1| SJCHGC05429 protein [Schistosoma japonicum]
Length = 278
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 18 KTVHVLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKK 77
KT VL ++E PAS F ++ +VAD F + Y KK
Sbjct: 57 KTFQVLTSTEFPASCFIFSDNQTA--------------LVADISFREFPGCLKAFYQRKK 102
Query: 78 QTKVESKGPRFELGDFCVKLGSVSISQ--NFKAVLVEV 113
+ +VE+KG +++LGDF V ++ + Q + K L+EV
Sbjct: 103 KLQVEAKGIKYQLGDFTVSFITLFMGQSASVKGYLIEV 140
>gi|17544288|ref|NP_500050.1| Protein MDT-20 [Caenorhabditis elegans]
gi|75023412|sp|Q9N5A1.2|MED20_CAEEL RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20
gi|351060108|emb|CCD67728.1| Protein MDT-20 [Caenorhabditis elegans]
Length = 198
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 22 VLHNSEQPASVFSILESGVPGGPGGPSGAVKNIP-VVADSLFDLLMMKMTPVYTSKKQTK 80
V+H+S+ P S FSI P K P V D FDL++ K++ + K
Sbjct: 52 VMHHSKCPQSTFSIC----------PKDTFKKSPKAVCDRGFDLILSKLSSGLIADNAGK 101
Query: 81 VESKGPRFEL-GDFCVKLGSVSISQNFKAVLVEVR 114
+E G + L D+ +++G+ + K V+VE+
Sbjct: 102 IEIIGNEYSLYKDWMIRVGTATQGTTVKGVVVEIE 136
>gi|357158640|ref|XP_003578193.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 20-like [Brachypodium distachyon]
Length = 225
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 18/89 (20%)
Query: 27 EQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKKQTKVESKGP 86
E+P FSIL + + + AD+ F L+M K+ + K + + +G
Sbjct: 80 ERPGLYFSILRP-------------QRLVLQADAAFPLVMEKLQ---SYKARVTLNFEGF 123
Query: 87 RFELGDFCVKLGSV--SISQNFKAVLVEV 113
+++LGDFC+++G + S+ + +++EV
Sbjct: 124 QYQLGDFCLRIGKCVPNNSETLRGIMMEV 152
>gi|281207018|gb|EFA81202.1| hypothetical protein PPL_06039 [Polysphondylium pallidum PN500]
Length = 821
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 76 KKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEV 113
KK+ E G ++E+GDF +++G + ++ + KA+ VEV
Sbjct: 90 KKRQTHEISGNKYEIGDFIIRIGPIVLNADVKAIAVEV 127
>gi|341892734|gb|EGT48669.1| CBN-MDT-20 protein [Caenorhabditis brenneri]
Length = 198
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 22 VLHNSEQPASVFSILESGVPGGPGGPSGAVKNIPVVADSLFDLLMMKMTPVYTSKKQTKV 81
V+H+S+ P S FSI + K+ V D FDL++ K++ + K+
Sbjct: 51 VMHHSKNPQSTFSICPKDM--------NFKKSPKAVCDRGFDLILGKLSGGFVMDTAGKI 102
Query: 82 ESKGPRFEL-GDFCVKLGSVSISQNFKAVLVEVR 114
E G + + D+ V++G+ + K V+VEV
Sbjct: 103 EINGNEYNVHTDWTVRVGTATQGTAVKGVIVEVE 136
>gi|281209513|gb|EFA83681.1| putative mediator complex subunit 20 [Polysphondylium pallidum
PN500]
Length = 195
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 76 KKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
KK+ E G ++E+GDF +++G + ++ + KA+ VEV
Sbjct: 88 KKRQTHEISGSKYEIGDFIIRIGPIVLNADVKAIAVEVE 126
>gi|328875204|gb|EGG23569.1| putative mediator complex subunit 20 [Dictyostelium fasciculatum]
Length = 223
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 76 KKQTKVESKGPRFELGDFCVKLGSVSISQNFKAVLVEVR 114
KK+ E G ++E+GDF VK G +++ + +LVEV
Sbjct: 88 KKRQVTEVYGVKYEIGDFTVKFGPITLRAETRGILVEVE 126
>gi|268553685|ref|XP_002634829.1| C. briggsae CBR-MDT-20 protein [Caenorhabditis briggsae]
gi|74790234|sp|Q61A42.1|MED20_CAEBR RecName: Full=Mediator of RNA polymerase II transcription subunit
20; AltName: Full=Mediator complex subunit 20
Length = 198
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 22 VLHNSEQPASVFSILESGVPGGPGGPSGAVKNIP-VVADSLFDLLMMKMTPVYTSKKQTK 80
V+H+S+ P S FSI P + P V D FDL++ K+ K
Sbjct: 52 VMHHSKCPQSTFSIC----------PKTDFRVSPKAVCDRGFDLILGKLAGGLVIDNAGK 101
Query: 81 VESKGPRFEL-GDFCVKLGSVSISQNFKAVLVEVR 114
+E G + + D+ V++G+ + K V+VEV
Sbjct: 102 IEINGNEYNIHSDWTVRVGTATQGTTVKGVVVEVE 136
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,889,486,891
Number of Sequences: 23463169
Number of extensions: 77921641
Number of successful extensions: 197124
Number of sequences better than 100.0: 132
Number of HSP's better than 100.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 196878
Number of HSP's gapped (non-prelim): 133
length of query: 118
length of database: 8,064,228,071
effective HSP length: 85
effective length of query: 33
effective length of database: 6,069,858,706
effective search space: 200305337298
effective search space used: 200305337298
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)