Query         psy8506
Match_columns 131
No_of_seqs    101 out of 184
Neff          5.1 
Searched_HMMs 29240
Date          Fri Aug 16 20:41:26 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy8506.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8506hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1r4x_A Gamma1-COP, coatomer ga 100.0 7.8E-54 2.7E-58  350.5  15.9  123    8-131    36-159 (275)
  2 1pzd_A Coatomer gamma subunit; 100.0 9.5E-54 3.2E-58  356.0  15.8  123    8-131    83-206 (322)
  3 2xzz_A Protein-glutamine gamma  89.9     2.8 9.6E-05   28.8   8.6   53   29-83     19-71  (102)
  4 1ex0_A Coagulation factor XIII  58.9      48  0.0016   30.2   9.0   70   12-83    610-695 (731)
  5 2r39_A FIXG-related protein; s  52.1      51  0.0018   22.2   7.5   69   34-108    35-103 (118)
  6 1vjj_A Protein-glutamine gluta  51.9      63  0.0022   29.2   8.5   70   12-83    575-660 (692)
  7 2q3z_A Transglutaminase 2; tra  48.6      47  0.0016   30.0   7.1   71   12-83    567-654 (687)
  8 1g0d_A Protein-glutamine gamma  45.6      52  0.0018   29.8   6.9   71   11-83    564-651 (695)
  9 1w8o_A Bacterial sialidase; 3D  32.2 2.2E+02  0.0074   23.6   8.9   66   34-104   377-442 (601)
 10 3kwu_A MUNC13-1; calcium bindi  15.8 1.9E+02  0.0065   19.1   4.1   45   59-105   104-148 (148)

No 1  
>1r4x_A Gamma1-COP, coatomer gamma subunit; appendage, beta sandwich, ADP-ribosylation factors, protein transport; 1.90A {Homo sapiens} SCOP: b.1.10.3 d.105.1.2
Probab=100.00  E-value=7.8e-54  Score=350.49  Aligned_cols=123  Identities=47%  Similarity=0.836  Sum_probs=116.6

Q ss_pred             cceecccCCceEEEEEEEEEcCccEEEEEEeeecCCcceeeeeEEEEecCCceeEEEEEecCCcCCCCCceEEEEEEcCC
Q psy8506           8 CRVMLTESETEYVVRCIKHSFQSHLILQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPIPRLAYNETQSVYIILQYPP   87 (131)
Q Consensus         8 ~pv~LTE~EtEYvV~~vKHiF~~hiVlQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi~~L~~~~~~~~yvvl~~~~   87 (131)
                      +||+|||+||||+|+||||+|++||||||+|+|||+||+|+||+|.+++++++++.+.+||++|+||++|++||+|++++
T Consensus        36 ~pv~LTE~EtEYvV~~vKHiF~~hiVlQF~i~NTL~dq~LenVsV~~~~~d~~~~~~~ipi~~L~~~~~g~~yV~l~~~~  115 (275)
T 1r4x_A           36 EPVALTESETEYVIRCTKHTFTNHMVFQFDCTNTLNDQTLENVTVQMEPTEAYEVLXYVPARSLPYNQPGTCYTLVALPK  115 (275)
T ss_dssp             SCEECSCTTSSEEEEEEEEECSSEEEEEEEEEECCTTEEEEEEEEEEEESSSCEEEEEECEEEECTTCCEEEEEEEECCS
T ss_pred             CcccccCCCCceEEEEEEEecCCcEEEEEEeEEccCcEEEeeEEEEEEcCCCceEEEeeeccccCCCCCccEEEEEEcCC
Confidence            79999999999999999999999999999999999999999999999998667999999999999999999999999985


Q ss_pred             -CCccceeeEEEEEEEEEeecCCCCCCCCCCCCccceEecCcccC
Q psy8506          88 -SLADSVTSVGAVLKFSVKDCDPTTGQPDSDEGYDDEYMVSRKGL  131 (131)
Q Consensus        88 -~~~~~~~~f~~~LkF~vke~dp~tge~~~~~gy~DEY~lEdl~l  131 (131)
                       +...++++|+|+|||++|||||+||+|+ |+||+|||+||||+|
T Consensus       116 ~~~~~~~~tf~~~LkF~vke~Dp~tGe~~-deGyeDEY~lEdlel  159 (275)
T 1r4x_A          116 EDPTAVACTFSCMMKFTVKDCDPTTGETD-DEGYEDEYVLEDLEV  159 (275)
T ss_dssp             SSTTCCCEEEEEEEEEEEEEBCTTTCCBC-SCCEEEEEECCCEEE
T ss_pred             CccccccceeEEEEEEEEEeccCCCCCcC-CCCccceEEccceee
Confidence             3345789999999999999999999998 899999999999985


No 2  
>1pzd_A Coatomer gamma subunit; platform domain, appendage domain, EAR domain, endocytosis/exocytosis complex; 2.31A {Bos taurus} SCOP: b.1.10.3 d.105.1.2
Probab=100.00  E-value=9.5e-54  Score=356.00  Aligned_cols=123  Identities=48%  Similarity=0.835  Sum_probs=117.0

Q ss_pred             cceecccCCceEEEEEEEEEcCccEEEEEEeeecCCcceeeeeEEEEecCCceeEEEEEecCCcCCCCCceEEEEEEcCC
Q psy8506           8 CRVMLTESETEYVVRCIKHSFQSHLILQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPIPRLAYNETQSVYIILQYPP   87 (131)
Q Consensus         8 ~pv~LTE~EtEYvV~~vKHiF~~hiVlQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi~~L~~~~~~~~yvvl~~~~   87 (131)
                      +||+|||+||||+|+||||+|++||||||+|+|||+||+|+||+|+++++++|++.+.|||++|+||++|++||+|++++
T Consensus        83 ~~v~LTE~EtEYvV~~vKHiF~~hiVlQF~~~NTL~dq~LenV~V~~~~~~~~~~~~~ip~~~L~~~~~g~~yv~~~~~~  162 (322)
T 1pzd_A           83 EPVALTESETEYVIRCTKHTFTDHMVFQFDCTNTLNDQTLENVTVQMEPSEAYEVLCYVPARSLPYNQPGTCYTLVALPK  162 (322)
T ss_dssp             SCEECSCTTSSEEEEEEEEECSSEEEEEEEEEECCTTEEEEEEEEEEEESSSCEEEEEECEEEECBTCCEEEEEEEECCS
T ss_pred             CcccccCCCceeEEEEEEEeccCcEEEEEEEEEccCceEEeeEEEEEecCCCceEEEEEEHhHCCCCCCeeEEEEEEecC
Confidence            79999999999999999999999999999999999999999999999998669999999999999999999999999985


Q ss_pred             -CCccceeeEEEEEEEEEeecCCCCCCCCCCCCccceEecCcccC
Q psy8506          88 -SLADSVTSVGAVLKFSVKDCDPTTGQPDSDEGYDDEYMVSRKGL  131 (131)
Q Consensus        88 -~~~~~~~~f~~~LkF~vke~dp~tge~~~~~gy~DEY~lEdl~l  131 (131)
                       +...++++|+|+|||++|||||+||+|+ |+||+|||+||||+|
T Consensus       163 ~~~~~~~~~f~~~LkF~vke~Dp~TGe~~-deGyeDEY~lEdlel  206 (322)
T 1pzd_A          163 EDPTAVACTFSCVMKFTVKDCDPTTGEAD-DEGYEDEYVLEDLEV  206 (322)
T ss_dssp             SCTTCCCEEEEEEEEEEEEEBCTTTCCBC-SCCEEEEEECCCEEE
T ss_pred             CCCCccceEEEEEEEEEEEeecCCCCCcC-CCCccceEEccceee
Confidence             3445789999999999999999999998 899999999999985


No 3  
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=89.86  E-value=2.8  Score=28.75  Aligned_cols=53  Identities=23%  Similarity=0.133  Sum_probs=41.9

Q ss_pred             CccEEEEEEeeecCCcceeeeeEEEEecCCceeEEEEEecCCcCCCCCceEEEEE
Q psy8506          29 QSHLILQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPIPRLAYNETQSVYIIL   83 (131)
Q Consensus        29 ~~hiVlQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi~~L~~~~~~~~yvvl   83 (131)
                      .+-++.++..+|.|+ ..|+|+.+.+|.++.... ..+.+..++++++...=+-+
T Consensus        19 ~~~l~v~vsf~NPL~-~~L~~c~~~vEG~GL~~~-~~~~~~~v~pg~~~~~~~~~   71 (102)
T 2xzz_A           19 GQECEVQIVFKNPLP-VTLTNVVFRLEGSGLQRP-KILNVGDIGGNETVTLRQSF   71 (102)
T ss_dssp             SSCEEEEEEEECCSS-SCBCSEEEEEEETTTEEE-EEEEECCBCTTCEEEEEEEE
T ss_pred             CCeEEEEEEEECCCC-CcccCEEEEEECCCCCcc-eEEEcCcCCCCCEEEEEEEE
Confidence            356788999999995 679999999998876666 67888999999986654433


No 4  
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=58.93  E-value=48  Score=30.22  Aligned_cols=70  Identities=21%  Similarity=0.164  Sum_probs=50.6

Q ss_pred             cccCCceEEEEEEEEEcC----------------ccEEEEEEeeecCCcceeeeeEEEEecCCceeEEEEEecCCcCCCC
Q psy8506          12 LTESETEYVVRCIKHSFQ----------------SHLILQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPIPRLAYNE   75 (131)
Q Consensus        12 LTE~EtEYvV~~vKHiF~----------------~hiVlQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi~~L~~~~   75 (131)
                      .+.+||.+.+..-|.|--                +-++.++..+|.|+ ..|+|..+.++.++.... ..+.+..+++++
T Consensus       610 ~~v~et~~~~~~~~di~l~~P~l~I~v~g~~~v~~~l~v~vsf~NPL~-~~L~~c~~~vEG~GL~~~-~~~~~~~v~pg~  687 (731)
T 1ex0_A          610 ARINETRDVLAKQKSTVLTIPEIIIKVRGTQVVGSDMTVTVQFTNPLK-ETLRNVWVHLDGPGVTRP-MKKMFREIRPNS  687 (731)
T ss_dssp             EEETTTCCEEEEEEEEECBCCCCEEEEEECCBTTSCEEEEEEEECCSS-SCEEEEEEEEEETTTEEE-EEEEEEEECTTC
T ss_pred             EEECCCCeEEEEEEEEEEeCCCEEEEeCCCcccCCeEEEEEEEECCCC-CcccceEEEEECCCCCce-eeEecCccCCCC
Confidence            356677766666665542                33667799999995 678999999998775555 667888999998


Q ss_pred             CceEEEEE
Q psy8506          76 TQSVYIIL   83 (131)
Q Consensus        76 ~~~~yvvl   83 (131)
                      +..+=+-|
T Consensus       688 ~~~~~~~~  695 (731)
T 1ex0_A          688 TVQWEEVC  695 (731)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEE
Confidence            86654433


No 5  
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=52.05  E-value=51  Score=22.18  Aligned_cols=69  Identities=12%  Similarity=0.107  Sum_probs=39.7

Q ss_pred             EEEEeeecCCcceeeeeEEEEecCCceeEEEEEecCCcCCCCCceEEEEEEcCCCCccceeeEEEEEEEEEeecC
Q psy8506          34 LQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPIPRLAYNETQSVYIILQYPPSLADSVTSVGAVLKFSVKDCD  108 (131)
Q Consensus        34 lQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi~~L~~~~~~~~yvvl~~~~~~~~~~~~f~~~LkF~vke~d  108 (131)
                      ..+++.|+-+.-  ..+.+.++..++++....-+ =.+++++....-|.++.|+.. ...+  ...++|++++.|
T Consensus        35 Ytlki~Nkt~~~--~~~~l~v~g~~~l~~~g~~~-i~v~~g~~~~~~v~v~~~~~~-~~~~--~~~i~f~v~~~~  103 (118)
T 2r39_A           35 YTLKVINKTQQV--QEYNLDVKGLNDVSWYGKQT-IQVEPGEVLNLPMSLGADPDK-LNSA--ITTIQFILTDKS  103 (118)
T ss_dssp             EEEEEEECSSSC--EEEEEEEESCSSCEEESCCE-EEECTTCEEEEEEEEEECGGG-CSSS--EEEEEEEEEEGG
T ss_pred             EEEEEEECCCCC--EEEEEEEeCCcccEEeCCCc-EEECCCCEEEEEEEEEEChHH-ccCC--ceeEEEEEEeCC
Confidence            347777876543  44556665433344332111 146688877776666666543 1222  778999998654


No 6  
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=51.87  E-value=63  Score=29.22  Aligned_cols=70  Identities=14%  Similarity=0.078  Sum_probs=48.6

Q ss_pred             cccCCceEEEEEEEEEcC----------------ccEEEEEEeeecCCcceeeeeEEEEecCCceeEEEEEecCCcCCCC
Q psy8506          12 LTESETEYVVRCIKHSFQ----------------SHLILQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPIPRLAYNE   75 (131)
Q Consensus        12 LTE~EtEYvV~~vKHiF~----------------~hiVlQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi~~L~~~~   75 (131)
                      .+.+||.+ +..-|.|--                +-++.++..+|.|+ ..|+|+.+.++.++.......+.+..+++++
T Consensus       575 ~~v~et~~-~~~~~di~l~~P~l~I~v~g~~~v~~~l~v~v~f~NPL~-~~L~~c~~~vEG~GL~~~~~~~~~~~v~pg~  652 (692)
T 1vjj_A          575 CKVPDESE-VVVERDIILDNPTLTLEVLNEARVRKPVNVQMLFSNPLD-EPVRDCVLMVEGSGLLLGNLKIDVPTLGPKE  652 (692)
T ss_dssp             EECTTSCC-EEEEEEEECBCCCEEEEECSCCBTTSCEEEEEEEECCSS-SCBCSEEEEEECTTTSSSCEEEEECCBCTTC
T ss_pred             EEECCCce-EEEEEEEEEcCCCEEEEeCCCcccCCeEEEEEEEECCCC-CcccceEEEEECCCCCCCceEEEcCccCCCC
Confidence            45566666 555555542                23566899999995 6789999999987654344556778899999


Q ss_pred             CceEEEEE
Q psy8506          76 TQSVYIIL   83 (131)
Q Consensus        76 ~~~~yvvl   83 (131)
                      +.++=+-|
T Consensus       653 ~~~~~~~~  660 (692)
T 1vjj_A          653 RSRVRFDI  660 (692)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEE
Confidence            86654433


No 7  
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=48.63  E-value=47  Score=30.02  Aligned_cols=71  Identities=21%  Similarity=0.180  Sum_probs=49.7

Q ss_pred             cccCCceEEEEEEEEEcC----------------ccEEEEEEeeecCCcceeeeeEEEEecCCceeEEEEEec-CCcCCC
Q psy8506          12 LTESETEYVVRCIKHSFQ----------------SHLILQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPI-PRLAYN   74 (131)
Q Consensus        12 LTE~EtEYvV~~vKHiF~----------------~hiVlQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi-~~L~~~   74 (131)
                      .+.+||.+.+..-|-|--                +-+..++..+|.|+ ..|+|+.+.++.++.......+++ ..++++
T Consensus       567 ~~v~et~~~~~~~~di~l~~P~l~I~v~g~~~v~~~~~v~v~f~NPL~-~~L~~c~~~vEG~GL~~~~~~~~~~~~v~pg  645 (687)
T 2q3z_A          567 LVEPVINSYLLAERDLYLENPEIKIRILGEPKQKRKLVAEVSLQNPLP-VALEGCTFTVEGAGLTEEQKTVEIPDPVEAG  645 (687)
T ss_dssp             EEETTTTEEEEEEEEEECBCCCCEEEEESCCSSSSCEEEEEEEECCSS-SCBCSEEEEEECTTTCSSCEEEEECSCBCTT
T ss_pred             EEECCCCeEEEEEEEEEEeCCCEEEEeCCCcccCCeEEEEEEEECCCC-CcccceEEEEECCCCCCCceEEecCCCcCCC
Confidence            356677776666665542                33556889999995 578899999998765544455677 789999


Q ss_pred             CCceEEEEE
Q psy8506          75 ETQSVYIIL   83 (131)
Q Consensus        75 ~~~~~yvvl   83 (131)
                      ++...=+-|
T Consensus       646 ~~~~~~~~~  654 (687)
T 2q3z_A          646 EEVKVRMDL  654 (687)
T ss_dssp             CEEEEEEEE
T ss_pred             CEEEEEEEE
Confidence            886654444


No 8  
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=45.59  E-value=52  Score=29.84  Aligned_cols=71  Identities=14%  Similarity=0.061  Sum_probs=49.6

Q ss_pred             ecccCCceEEEEEEEEEc----------------CccEEEEEEeeecCCcceeeeeEEEEecCCceeEEEEEec-CCcCC
Q psy8506          11 MLTESETEYVVRCIKHSF----------------QSHLILQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPI-PRLAY   73 (131)
Q Consensus        11 ~LTE~EtEYvV~~vKHiF----------------~~hiVlQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi-~~L~~   73 (131)
                      ..+.+||.+.+..-|-|-                .+-++.++..+|.|+ ..|+|+.+.++.++.... ..+++ ..+++
T Consensus       564 ~~~v~et~~~~~~~~di~l~~P~l~I~v~g~~~v~~~l~a~vsf~NPL~-~~L~~c~~~vEG~GL~~~-~~~~~~~~v~P  641 (695)
T 1g0d_A          564 LLDAPGENGPIMTVANIPLSTPELLVQVPGKAVVWEPLTAYVSFTNPLP-VPLKGGVFTLEGAGLLSA-TQIHVNGAVAP  641 (695)
T ss_dssp             EEECCC---EEEEEEEEECBCCCCEEECCSCEETTCCEEEEEEEECCSS-SCEESCEEEEEETTTEEE-EEEECSSEECT
T ss_pred             EEEECCCCeEEEEEEEEEEcCCCEEEEeCCCcccCCeEEEEEEEECCCC-CcccceEEEEECCCCCcc-eEEecCCCcCC
Confidence            345667777666666653                234567799999995 678999999998876666 77888 88999


Q ss_pred             CCCceEEEEE
Q psy8506          74 NETQSVYIIL   83 (131)
Q Consensus        74 ~~~~~~yvvl   83 (131)
                      +++...=+-|
T Consensus       642 g~~~~~~~~~  651 (695)
T 1g0d_A          642 SGKVSVKLSF  651 (695)
T ss_dssp             TCEEEEEEEE
T ss_pred             CCEEEEEEEE
Confidence            9886654433


No 9  
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=32.16  E-value=2.2e+02  Score=23.61  Aligned_cols=66  Identities=11%  Similarity=0.159  Sum_probs=41.8

Q ss_pred             EEEEeeecCCcceeeeeEEEEecCCceeEEEEEecCCcCCCCCceEEEEEEcCCCCccceeeEEEEEEEEE
Q psy8506          34 LQLEVSNTLSDQLLENVTVQLEIPEGYELIKETPIPRLAYNETQSVYIILQYPPSLADSVTSVGAVLKFSV  104 (131)
Q Consensus        34 lQF~v~NTl~dq~LenV~V~~~~~~~~~~~~~ipi~~L~~~~~~~~yvvl~~~~~~~~~~~~f~~~LkF~v  104 (131)
                      +-..|+|. ...-+.+.++.+....+|....  +.+++++|+....-+-+..+...  ..|.+...++|.+
T Consensus       377 ~~~~vtn~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~t~~~~vt~~~~~--~~g~y~l~~~~~~  442 (601)
T 1w8o_A          377 VPVAVTNQ-SGIAVPKPSLQLDASPDWQVQG--SVEPLMPGRQAKGQVTITVPAGT--TPGRYRVGATLRT  442 (601)
T ss_dssp             EEEEEECC-SSSCBSSCEEEEECCTTSEEEE--EECCBCTTCEEEEEEEEECCTTC--CCEEEEEEEEEEE
T ss_pred             EEEEEECC-CceeccCceEEEecCCCcEEec--cccccCCCCceEEEEEEecCCCC--CCCcEEeeEEEEe
Confidence            34556785 3445778888877666676655  67889999888777777666432  2344544444443


No 10 
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=15.77  E-value=1.9e+02  Score=19.09  Aligned_cols=45  Identities=9%  Similarity=0.074  Sum_probs=26.3

Q ss_pred             ceeEEEEEecCCcCCCCCceEEEEEEcCCCCccceeeEEEEEEEEEe
Q psy8506          59 GYELIKETPIPRLAYNETQSVYIILQYPPSLADSVTSVGAVLKFSVK  105 (131)
Q Consensus        59 ~~~~~~~ipi~~L~~~~~~~~yvvl~~~~~~~~~~~~f~~~LkF~vk  105 (131)
                      .+-=...+|+..|.  .....|.-|..........|.+...|+|.+|
T Consensus       104 ~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~~~~G~i~l~l~~e~k  148 (148)
T 3kwu_A          104 DFLGQTIIEVRTLS--GEMDVWYNLDKRTDKSAVSGAIRLHISVEIK  148 (148)
T ss_dssp             EEEEEEEEEGGGCC--SEEEEEEECBCSSTTCCCCCEEEEEEEEEC-
T ss_pred             ccEEEEEEEHHHCc--CCCCEEEEcccCCCCCCCceEEEEEEEEEeC
Confidence            34445678888883  2334555554332222256888888888764


Done!