Query psy8507
Match_columns 197
No_of_seqs 204 out of 487
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 20:43:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8507.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8507hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aqp_A Probable secdf protein- 98.9 3.4E-09 1.2E-13 102.6 7.8 99 97-196 611-714 (741)
2 3aqp_A Probable secdf protein- 98.8 9.2E-09 3.2E-13 99.6 9.4 99 97-196 315-416 (741)
3 2v50_A Multidrug resistance pr 98.8 5.4E-09 1.9E-13 104.0 6.0 98 97-195 382-486 (1052)
4 4dx5_A Acriflavine resistance 98.6 5.5E-08 1.9E-12 96.6 8.6 75 97-171 382-460 (1057)
5 2v50_A Multidrug resistance pr 98.5 1.5E-07 5.3E-12 93.6 8.5 76 97-172 914-992 (1052)
6 3ne5_A Cation efflux system pr 98.4 2.6E-07 9E-12 91.7 6.6 77 95-171 385-475 (1054)
7 4dx5_A Acriflavine resistance 98.2 3.3E-06 1.1E-10 83.9 9.7 93 97-194 915-1014(1057)
8 3ne5_A Cation efflux system pr 98.1 4.9E-06 1.7E-10 82.6 7.1 75 97-171 921-1009(1054)
9 2af7_A Gamma-carboxymuconolact 24.9 1.1E+02 0.0037 22.1 4.7 58 105-162 53-114 (125)
10 3d7i_A Carboxymuconolactone de 12.3 3.2E+02 0.011 18.7 4.6 56 104-159 40-100 (105)
No 1
>3aqp_A Probable secdf protein-export membrane protein; translocon, cell membrane, MEM protein transport, translocation, transmembrane, transport; 3.30A {Thermus thermophilus} PDB: 2rrn_A
Probab=98.86 E-value=3.4e-09 Score=102.62 Aligned_cols=99 Identities=15% Similarity=0.106 Sum_probs=85.0
Q ss_pred HHHHhccccchhhHHHHhhhhcceeeehHHHHhHhhccc-----CChhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhccc
Q psy8507 97 VMYLMNIKLNPISCVLIVNSSGIYIHFISYICLSFLTCI-----GNRDRRVRLSIEHMYSVVLHAGLILLVAISILAFSE 171 (197)
Q Consensus 97 ~M~l~gi~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s~-----~~~~~R~~~aL~~~G~pVl~ga~ST~lgv~~L~fs~ 171 (197)
+|+++|+++|..+++.+++.+|++||+++|+...|.... .+.+|.+.+|+.+.+.|++..++||++|+++|+++.
T Consensus 611 ~l~l~g~~l~~~~i~~~l~liGisvd~~I~l~~r~re~~~~~~g~~~~eav~~a~~~~~~~il~Tsltt~~g~~~L~~~g 690 (741)
T 3aqp_A 611 MYSLLGLEFSIPTIAALLTIVGYSINDSIVVSDRIRENQKLLRHLPYAELVNRSINQTLSRTVMTSLTTLLPILALLFLG 690 (741)
T ss_dssp HHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCccHHHHHHHHHHHHHhhcceEEehHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999997542 244588999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhc
Q psy8507 172 FQFILRIFFYMLFGIVLVGLLYMVL 196 (197)
Q Consensus 172 s~~~~~~FF~~~~~vi~~G~~hGLv 196 (197)
...++.+- ..+..-+++|+++.|+
T Consensus 691 ~~~~~~~g-~~~~~Gl~~~~~~sl~ 714 (741)
T 3aqp_A 691 GSVLRDFA-LAIFVGIFVGTYSSIY 714 (741)
T ss_dssp CHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 98887764 4444445677777664
No 2
>3aqp_A Probable secdf protein-export membrane protein; translocon, cell membrane, MEM protein transport, translocation, transmembrane, transport; 3.30A {Thermus thermophilus} PDB: 2rrn_A
Probab=98.82 E-value=9.2e-09 Score=99.62 Aligned_cols=99 Identities=9% Similarity=-0.012 Sum_probs=84.1
Q ss_pred HHHHhccccchhhHHHHhhhhcceeeehHHHHhHhhccc---CChhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhccccc
Q psy8507 97 VMYLMNIKLNPISCVLIVNSSGIYIHFISYICLSFLTCI---GNRDRRVRLSIEHMYSVVLHAGLILLVAISILAFSEFQ 173 (197)
Q Consensus 97 ~M~l~gi~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s~---~~~~~R~~~aL~~~G~pVl~ga~ST~lgv~~L~fs~s~ 173 (197)
+|+++|.+||..+++.+++++|++||+++|+...|.... ++.++.+.+++++.+.|++.+.+||++|.++|++++..
T Consensus 315 ~l~l~g~~l~l~~i~glil~iGi~VD~~I~i~eri~e~~~~g~~~~~Ai~~~~~~~~~~Il~s~lTt~i~f~~L~~~~~~ 394 (741)
T 3aqp_A 315 LLSGLGATLTLPGIAGLVLTLGAAVDGNVLSFERIKEELRAGKKLRQAIPEGFRHSTLTIMDVNIAHLLAAAALYQYATG 394 (741)
T ss_dssp HHHHHCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHCCCccHHHHHHHHHHHHHHHhchhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 899999999999999999999999999999999997653 24458899999999999999999999999999999988
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhc
Q psy8507 174 FILRIFFYMLFGIVLVGLLYMVL 196 (197)
Q Consensus 174 ~~~~~FF~~~~~vi~~G~~hGLv 196 (197)
.++-| -.++.+-++++++..++
T Consensus 395 ~~~~f-a~~~~~gi~~s~~~al~ 416 (741)
T 3aqp_A 395 PVRGF-AVILAIGVVASVFSNLV 416 (741)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHH
T ss_pred ccchH-HHHHHHHHHHHHHHHHH
Confidence 77665 34444556666666553
No 3
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=98.77 E-value=5.4e-09 Score=103.96 Aligned_cols=98 Identities=10% Similarity=0.156 Sum_probs=79.1
Q ss_pred HHHHhccccchhhHHHHhhhhcceeeehHHHHhHhhcc---cC-ChhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccc
Q psy8507 97 VMYLMNIKLNPISCVLIVNSSGIYIHFISYICLSFLTC---IG-NRDRRVRLSIEHMYSVVLHAGLILLVAISILAFSEF 172 (197)
Q Consensus 97 ~M~l~gi~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s---~~-~~~~R~~~aL~~~G~pVl~ga~ST~lgv~~L~fs~s 172 (197)
+|+++|+++|.+|++.+++++|++||++.|+...|... .| ++++.+.+|..+.+.||+.+++||++|.+||+|++.
T Consensus 382 ~l~~~g~~ln~~s~~gl~~~iGi~vd~aI~~~~~~~~~~~~~g~~~~~A~~~a~~~~~~pil~t~ltt~~~f~pl~~~~~ 461 (1052)
T 2v50_A 382 VLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPREAARKSMGQIQGALVGIAMVLSAVFLPMAFFGG 461 (1052)
T ss_dssp HHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHTTSSTTHHHHHHHHHTTHHHHTCCH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhhccceEEEehHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999653 34 455889999999999999999999999999999986
Q ss_pred c---hhHHHHHHHHHHHHHHHhhhhh
Q psy8507 173 Q---FILRIFFYMLFGIVLVGLLYMV 195 (197)
Q Consensus 173 ~---~~~~~FF~~~~~vi~~G~~hGL 195 (197)
. +++.+ ..++..-++++++..|
T Consensus 462 ~~g~~~~~~-~~~~~~gl~~s~~~~l 486 (1052)
T 2v50_A 462 STGVIYRQF-SITIVSAMALSVIVAL 486 (1052)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 3 44433 2333333444444444
No 4
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=98.63 E-value=5.5e-08 Score=96.60 Aligned_cols=75 Identities=13% Similarity=0.198 Sum_probs=69.2
Q ss_pred HHHHhccccchhhHHHHhhhhcceeeehHHHHhHhhcc--c-C-ChhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhccc
Q psy8507 97 VMYLMNIKLNPISCVLIVNSSGIYIHFISYICLSFLTC--I-G-NRDRRVRLSIEHMYSVVLHAGLILLVAISILAFSE 171 (197)
Q Consensus 97 ~M~l~gi~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s--~-~-~~~~R~~~aL~~~G~pVl~ga~ST~lgv~~L~fs~ 171 (197)
+|+++|..+|.+|++.+++++|++||++.|+...|... . | ++++.+.+|..+.+.||+.+++||++|.+||+|++
T Consensus 382 ~l~~~g~~ln~~sl~gl~~~iGi~vd~aIv~~~~~~~~~~~~g~~~~~A~~~a~~~~~~pi~~t~ltt~~~f~pl~~~~ 460 (1057)
T 4dx5_A 382 VLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFG 460 (1057)
T ss_dssp HHHHTTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGGCC
T ss_pred HHHHhCCcHHHHHHHHHHHHeeccccceEEeHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 89999999999999999999999999999999988753 1 3 44588999999999999999999999999999998
No 5
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=98.53 E-value=1.5e-07 Score=93.57 Aligned_cols=76 Identities=11% Similarity=0.008 Sum_probs=69.4
Q ss_pred HHHHhccccchhhHHHHhhhhcceeeehHHHHhHhhccc--C-ChhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcccc
Q psy8507 97 VMYLMNIKLNPISCVLIVNSSGIYIHFISYICLSFLTCI--G-NRDRRVRLSIEHMYSVVLHAGLILLVAISILAFSEF 172 (197)
Q Consensus 97 ~M~l~gi~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s~--~-~~~~R~~~aL~~~G~pVl~ga~ST~lgv~~L~fs~s 172 (197)
.|.++|.++|..+++.+++.+|++||++.|+...|.... | +.++.+.+|..+.+.||+..++||++|++||+|+..
T Consensus 914 ~~~~~g~~l~~~~~~g~~~l~Gi~vd~~I~lv~~~~~~~~~g~~~~~Ai~~a~~~~~rpil~t~~tt~~g~~pl~~~~~ 992 (1052)
T 2v50_A 914 ATSMRGLSNDVFFQVGLLTTIGLSAKNAILIVEFAKELHEQGKGIVEAAIEACRMRLRPIVMTSLAFILGVVPLAISTG 992 (1052)
T ss_dssp HHHHTTCCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHTCCS
T ss_pred HHHHHCCCccHHHHHHHHHHHHHHHcCeEEEeehHHHHHHcCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 789999999999999999999999999999999887543 2 345889999999999999999999999999999986
No 6
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=98.41 E-value=2.6e-07 Score=91.75 Aligned_cols=77 Identities=13% Similarity=0.055 Sum_probs=67.9
Q ss_pred HHHHHHhccccchhhHHHHhhhhcceeeehHHHHhHhhcccC-------------C-hhHHHHHHHHHHhHHHHHHHHHH
Q psy8507 95 LLVMYLMNIKLNPISCVLIVNSSGIYIHFISYICLSFLTCIG-------------N-RDRRVRLSIEHMYSVVLHAGLIL 160 (197)
Q Consensus 95 f~~M~l~gi~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s~~-------------~-~~~R~~~aL~~~G~pVl~ga~ST 160 (197)
|.+|+++|.++|.+|++.+++++|++||++.|+...+..... . +.+-+.+|..+++.|++.++++|
T Consensus 385 ~~~l~~~g~~ln~~sl~gl~l~iGi~vd~aIvvve~~~~~~~~~~~~~~~~~~~g~~~~~a~~~a~~~~~~~i~~s~ltt 464 (1054)
T 3ne5_A 385 FIVMHFQGLNANIMSLGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPALFISLLII 464 (1054)
T ss_dssp HHHHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHSCSSCCCTTHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHhhheecCcEEEeeHHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 338999999999999999999999999999999988765332 2 23678889999999999999999
Q ss_pred HHHHHHhhccc
Q psy8507 161 LVAISILAFSE 171 (197)
Q Consensus 161 ~lgv~~L~fs~ 171 (197)
++|++||+|++
T Consensus 465 ~~~f~pl~~~~ 475 (1054)
T 3ne5_A 465 TLSFIPIFTLE 475 (1054)
T ss_dssp HHTTGGGGGCC
T ss_pred HHHHHHHHHhc
Confidence 99999999987
No 7
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=98.23 E-value=3.3e-06 Score=83.95 Aligned_cols=93 Identities=11% Similarity=-0.005 Sum_probs=75.6
Q ss_pred HHHHhccccchhhHHHHhhhhcceeeehHHHHhHhhcc---cC-ChhHHHHHHHHHHhHHHHHHHHHHHHHHHHhhccc-
Q psy8507 97 VMYLMNIKLNPISCVLIVNSSGIYIHFISYICLSFLTC---IG-NRDRRVRLSIEHMYSVVLHAGLILLVAISILAFSE- 171 (197)
Q Consensus 97 ~M~l~gi~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s---~~-~~~~R~~~aL~~~G~pVl~ga~ST~lgv~~L~fs~- 171 (197)
.|.+.|..+|..+++.+++.+|++||++.|+...|... .| +.++-+.+|..+.+.||+..++||++|+++|+++.
T Consensus 915 ~l~~~g~~l~~~~~~g~i~l~Gi~vd~~I~lv~~~~~~~~~~g~~~~~Ai~~a~~~~~rpil~t~ltt~~g~~pl~~~~g 994 (1057)
T 4dx5_A 915 AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVISTG 994 (1057)
T ss_dssp HHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTCCS
T ss_pred HHHHHCCCccHHHHHHHHHHHHHHHcCeEEEehHHhHHHHHcCCCHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhcC
Confidence 78899999999999999999999999999999888544 33 34588999999999999999999999999999996
Q ss_pred --cchhHHHHHHHHHHHHHHHhhhh
Q psy8507 172 --FQFILRIFFYMLFGIVLVGLLYM 194 (197)
Q Consensus 172 --s~~~~~~FF~~~~~vi~~G~~hG 194 (197)
..++ +-+-.++++|++-+
T Consensus 995 ~g~~~~-----~~~g~~~~~Gl~~s 1014 (1057)
T 4dx5_A 995 AGSGAQ-----NAVGTGVMGGMVTA 1014 (1057)
T ss_dssp TTHHHH-----HHHHHHHHHHHHHH
T ss_pred Cchhhh-----cccHHHHHHHHHHH
Confidence 3333 33444445554443
No 8
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=98.06 E-value=4.9e-06 Score=82.63 Aligned_cols=75 Identities=8% Similarity=0.109 Sum_probs=64.0
Q ss_pred HHHHhccccchhhHHHHhhhhcceeeehHHHHhHhhcccC--------------ChhHHHHHHHHHHhHHHHHHHHHHHH
Q psy8507 97 VMYLMNIKLNPISCVLIVNSSGIYIHFISYICLSFLTCIG--------------NRDRRVRLSIEHMYSVVLHAGLILLV 162 (197)
Q Consensus 97 ~M~l~gi~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s~~--------------~~~~R~~~aL~~~G~pVl~ga~ST~l 162 (197)
.|.+.|..+|..+++.+++.+|++||++.|+...+..... +..+-+.+|....+.||+..++||++
T Consensus 921 ~l~l~g~~l~~~~~~g~i~l~Gi~vd~~I~lv~~~~~~~~~~~~~~~~~~~~g~~~~~Ai~~a~~~~~rpil~t~ltti~ 1000 (1054)
T 3ne5_A 921 LLWWMGFHLSVATGTGFIALAGVAAEFGVVMLMYLRHAIEAVPSLNNPQTFSEQKLDEALYHGAVLRVRPKAMTVAVIIA 1000 (1054)
T ss_dssp HHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHHHHTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCccHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhcccccCCCCHHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 7889999999999999999999999999999744432211 12366788899999999999999999
Q ss_pred HHHHhhccc
Q psy8507 163 AISILAFSE 171 (197)
Q Consensus 163 gv~~L~fs~ 171 (197)
|++||+++.
T Consensus 1001 g~~pl~~~~ 1009 (1054)
T 3ne5_A 1001 GLLPILWGT 1009 (1054)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHHhhc
Confidence 999999996
No 9
>2af7_A Gamma-carboxymuconolactone decarboxylase; O26336_metth, NESG, TT747, structural genomics, PSI, protein structure initiative; 2.81A {Methanothermobacterthermautotrophicus} SCOP: a.152.1.2
Probab=24.88 E-value=1.1e+02 Score=22.14 Aligned_cols=58 Identities=5% Similarity=-0.142 Sum_probs=37.2
Q ss_pred cchhhHHHHhhhhcceeeehHHHHhHhhcccCChhHHHHHHHHHH----hHHHHHHHHHHHH
Q psy8507 105 LNPISCVLIVNSSGIYIHFISYICLSFLTCIGNRDRRVRLSIEHM----YSVVLHAGLILLV 162 (197)
Q Consensus 105 Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~s~~~~~~R~~~aL~~~----G~pVl~ga~ST~l 162 (197)
.---.+|.|.+++...-+||...-..-....|-+++++.+++... |.|-...++..+-
T Consensus 53 ~k~reLi~la~~~~~gc~~cl~~H~~~a~~~G~t~~ei~e~~~~~~~~~G~p~~~~a~~~~~ 114 (125)
T 2af7_A 53 LKTRELLTLAALTVLRADDQLKSHVRGALNAGCSKDEIIEVMIQMAVYAGFPAAINAVLAAK 114 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 334567777777777777664333333345677778888887765 7788777665543
No 10
>3d7i_A Carboxymuconolactone decarboxylase family protein; 1591455, structural genomics, JOI for structural genomics, JCSG; HET: MSE PG4; 1.75A {Methanocaldococcus jannaschii}
Probab=12.29 E-value=3.2e+02 Score=18.68 Aligned_cols=56 Identities=4% Similarity=-0.110 Sum_probs=33.1
Q ss_pred ccchhhHHHHhhhhcceeeehHHHHhHhhc-ccCChhHHHHHHHHHH----hHHHHHHHHH
Q psy8507 104 KLNPISCVLIVNSSGIYIHFISYICLSFLT-CIGNRDRRVRLSIEHM----YSVVLHAGLI 159 (197)
Q Consensus 104 ~Ln~iS~v~Li~sIG~sVDFtaHI~~~F~~-s~~~~~~R~~~aL~~~----G~pVl~ga~S 159 (197)
+.---.+|.+.+++.-.-+||...=..-.. ..|-+++++.+++... |.|-...++.
T Consensus 40 ~~k~reLi~lavs~~~gc~~cl~~H~~~A~~~~G~t~eei~e~~~~~~~~~G~p~~~~a~~ 100 (105)
T 3d7i_A 40 DYKTQKLIAIGIVASRCDEVAIEKQMKSAMKELGITKEEIADVLRVVLLTSGMPAFTKAMK 100 (105)
T ss_dssp CHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence 333456778877777777776433333334 5677777777776654 4555444443
Done!