Query psy8508
Match_columns 246
No_of_seqs 106 out of 245
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 20:44:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8508.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8508hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3g_A N-acetyltransferase; ma 70.2 29 0.00099 25.4 9.0 37 39-75 19-55 (161)
2 3t90_A Glucose-6-phosphate ace 63.8 22 0.00074 25.5 6.6 86 41-137 5-113 (149)
3 1jvr_A HTLV-II MA, MA, human T 60.5 6.1 0.00021 31.2 3.0 32 46-77 39-74 (137)
4 1cjw_A Protein (serotonin N-ac 47.8 73 0.0025 22.7 7.8 38 41-78 6-47 (166)
5 4evy_A Aminoglycoside N(6')-ac 46.0 86 0.003 23.0 7.9 37 41-78 22-60 (166)
6 3mgd_A Predicted acetyltransfe 41.0 95 0.0032 22.1 7.0 23 42-64 3-25 (157)
7 2l9b_B MRNA 3'-END-processing 37.3 22 0.00075 24.0 2.4 26 59-84 21-46 (53)
8 3i9s_A Integron cassette prote 36.3 1.1E+02 0.0038 22.7 6.9 86 40-138 23-134 (183)
9 2vez_A Putative glucosamine 6- 36.0 1.4E+02 0.0048 22.5 8.1 85 41-137 48-155 (190)
10 3dr6_A YNCA; acetyltransferase 33.7 1.1E+02 0.0037 21.9 6.2 38 41-78 4-48 (174)
11 2fe7_A Probable N-acetyltransf 32.4 1.4E+02 0.0047 21.3 9.5 85 40-137 10-118 (166)
12 1s3z_A Aminoglycoside 6'-N-ace 31.2 1.5E+02 0.0051 21.4 7.8 37 41-77 21-59 (165)
13 4e0a_A BH1408 protein; structu 30.8 1.4E+02 0.0049 21.1 8.9 37 43-79 3-52 (164)
14 3f8k_A Protein acetyltransfera 28.4 1.2E+02 0.0043 21.6 5.8 83 41-138 5-104 (160)
15 4ag7_A Glucosamine-6-phosphate 28.3 1.6E+02 0.0056 21.0 7.7 86 41-137 22-130 (165)
16 3eo4_A Uncharacterized protein 27.8 1.7E+02 0.0059 21.1 9.0 87 41-137 14-120 (164)
17 1kux_A Aralkylamine, serotonin 26.8 2.1E+02 0.0071 21.7 8.4 39 41-79 35-77 (207)
18 4fd4_A Arylalkylamine N-acetyl 25.8 2.1E+02 0.0073 21.5 9.0 65 41-116 7-81 (217)
19 2o28_A Glucosamine 6-phosphate 24.0 1.9E+02 0.0065 21.5 6.3 37 41-77 39-76 (184)
20 1pfj_A TFIIH basal transcripti 20.8 61 0.0021 24.8 2.7 28 37-64 73-102 (108)
No 1
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=70.24 E-value=29 Score=25.36 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=28.9
Q ss_pred EEEeecCCCCCcHHHHHHHHHHhhccCCCChhHHHHH
Q psy8508 39 VTFEGRSAIDSDFHGVKQLLKQLFLKAHINLSELTDV 75 (246)
Q Consensus 39 vDFe~~dp~~~DfhgIk~LL~qlf~~~~idls~Ladl 75 (246)
-.+.++...+.|+..|..|+++++....+....+...
T Consensus 19 ~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~ 55 (161)
T 3i3g_A 19 VDLELRVLEESDLSSHLELLGHLTEAPPLSGVELANI 55 (161)
T ss_dssp CCEEEEECCGGGHHHHHHHHTTTSCCCCCCHHHHHHH
T ss_pred ccEEEEECcHhhHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 3466778889999999999999887767776665553
No 2
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana}
Probab=63.80 E-value=22 Score=25.46 Aligned_cols=86 Identities=17% Similarity=0.152 Sum_probs=53.1
Q ss_pred EeecCCCCCcHH-HHHHHHHHhhccCCCChhHHHH---HHHcCCCcceEEEecCCCCCCCCCCCCCCCCCeEEEEEeeec
Q psy8508 41 FEGRSAIDSDFH-GVKQLLKQLFLKAHINLSELTD---VIISQSNIGSVVKQSTADEDMDDDDDESDVNDVFGITTVINI 116 (246)
Q Consensus 41 Fe~~dp~~~Dfh-gIk~LL~qlf~~~~idls~Lad---lIi~Q~~vGtvIK~~~~d~~~dd~dd~~~~~dv~g~~SvLnl 116 (246)
+.++...+.|.. .|..|+.+++...++....+.. .+........++-.. +. .++.+.|++.+...
T Consensus 5 ~~ir~~~~~D~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~~~~~vG~~~~~~~ 73 (149)
T 3t90_A 5 FKIRKLEISDKRKGFIELLGQLTVTGSVTDEEFDRRFEEIRSYGDDHVICVIE--EE---------TSGKIAATGSVMIE 73 (149)
T ss_dssp EEEEECCGGGGGTTHHHHHTTTSCCCCCCHHHHHHHHHHHHTTGGGEEEEEEE--ET---------TTTEEEEEEEEEEE
T ss_pred EEEEecCchhhHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhCCCCcEEEEEE--cC---------CCCcEEEEEEEEec
Confidence 456677888999 9999999988777787777776 344444222332221 10 13568888777541
Q ss_pred -------------------CCCCCchHHHHHHHHHHHHHH
Q psy8508 117 -------------------TNKKHIECVQQLRSLLSELAE 137 (246)
Q Consensus 117 -------------------~~~k~~~~i~~l~~yll~k~~ 137 (246)
..++....-+.|.+.+++.|+
T Consensus 74 ~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~~~ 113 (149)
T 3t90_A 74 KKFLRNCGKAGHIEDVVVDSRFRGKQLGKKVVEFLMDHCK 113 (149)
T ss_dssp ECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHH
T ss_pred cccCCCCCCceEEEEEEECHHHhCCcHHHHHHHHHHHHHH
Confidence 223445556677777766664
No 3
>1jvr_A HTLV-II MA, MA, human T-cell leukemia virus type II matrix protein; HTLV-II matrix protein, retroviral matrix protein; NMR {Human t-lymphotropic virus 2} SCOP: a.61.1.2
Probab=60.51 E-value=6.1 Score=31.18 Aligned_cols=32 Identities=28% Similarity=0.389 Sum_probs=24.2
Q ss_pred CCCCcHHHHHHHHHHhhcc----CCCChhHHHHHHH
Q psy8508 46 AIDSDFHGVKQLLKQLFLK----AHINLSELTDVII 77 (246)
Q Consensus 46 p~~~DfhgIk~LL~qlf~~----~~idls~LadlIi 77 (246)
|++-|||-+|++|+--+.. +.||.|=||.+|=
T Consensus 39 PS~fDFhqLr~fLklAl~TPvWlnPI~YSlLA~LiP 74 (137)
T 1jvr_A 39 PSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLIP 74 (137)
T ss_dssp CSTTTHHHHHHHHHHHHTCTTSTTTTCTTTHHHHSC
T ss_pred CCcccHHHHHHHHHHHhcCcccccchhHHHHHhhcc
Confidence 6789999999999855443 5778877776653
No 4
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A
Probab=47.76 E-value=73 Score=22.72 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=29.1
Q ss_pred EeecCCCCCcHHHHHHHHHHhhcc----CCCChhHHHHHHHc
Q psy8508 41 FEGRSAIDSDFHGVKQLLKQLFLK----AHINLSELTDVIIS 78 (246)
Q Consensus 41 Fe~~dp~~~DfhgIk~LL~qlf~~----~~idls~LadlIi~ 78 (246)
+.++...+.|+..|..|.+..|.. ..+....+...+..
T Consensus 6 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 47 (166)
T 1cjw_A 6 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTL 47 (166)
T ss_dssp SEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHH
T ss_pred eeeecCCHHHHHHHHHHHHHhCCCCcccCccCHHHHHHHHhc
Confidence 455677889999999999988764 26777778777754
No 5
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=46.03 E-value=86 Score=23.04 Aligned_cols=37 Identities=14% Similarity=0.252 Sum_probs=25.5
Q ss_pred EeecCCCCCcHHHHHHHHHHhhccCCCC--hhHHHHHHHc
Q psy8508 41 FEGRSAIDSDFHGVKQLLKQLFLKAHIN--LSELTDVIIS 78 (246)
Q Consensus 41 Fe~~dp~~~DfhgIk~LL~qlf~~~~id--ls~LadlIi~ 78 (246)
+..+.....|...|..|++++|.. ... ...+...+-.
T Consensus 22 ~~ir~~~~~D~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~ 60 (166)
T 4evy_A 22 MNIKPASEASLKDWLELRNKLWSD-SEASHLQEMHQLLAE 60 (166)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSCC-CHHHHHHHHHHHHTC
T ss_pred cEEEECCHHHHHHHHHHHHHHhcC-CchHHHHHHHHHhcC
Confidence 446777889999999999998876 222 2445555443
No 6
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Probab=41.05 E-value=95 Score=22.07 Aligned_cols=23 Identities=17% Similarity=0.115 Sum_probs=18.4
Q ss_pred eecCCCCCcHHHHHHHHHHhhcc
Q psy8508 42 EGRSAIDSDFHGVKQLLKQLFLK 64 (246)
Q Consensus 42 e~~dp~~~DfhgIk~LL~qlf~~ 64 (246)
.++.....|+..|..|....+..
T Consensus 3 ~ir~~~~~D~~~i~~l~~~~~~~ 25 (157)
T 3mgd_A 3 NYRKADMKDISLLVSIRKRQLID 25 (157)
T ss_dssp EEEECCGGGHHHHHHHHHHHHHH
T ss_pred eEEeCCHHHHHHHHHHHHHHHHH
Confidence 34566788999999999988864
No 7
>2l9b_B MRNA 3'-END-processing protein RNA14; 3' END mRNA maturation, transcription; NMR {Saccharomyces cerevisiae}
Probab=37.32 E-value=22 Score=23.98 Aligned_cols=26 Identities=19% Similarity=0.332 Sum_probs=22.6
Q ss_pred HHhhccCCCChhHHHHHHHcCCCcce
Q psy8508 59 KQLFLKAHINLSELTDVIISQSNIGS 84 (246)
Q Consensus 59 ~qlf~~~~idls~LadlIi~Q~~vGt 84 (246)
+|||-...++-..|++.+..|-++-+
T Consensus 21 RQYFK~~~ld~~klv~~L~dqV~ip~ 46 (53)
T 2l9b_B 21 RQYFNTNLLDAQKLVNFLNDQVEIPT 46 (53)
T ss_dssp GGGGCSSCCCHHHHHHHHHHTCCCC-
T ss_pred HhhhcccccCHHHHHHHHHhccccCC
Confidence 38999999999999999999988754
No 8
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=36.33 E-value=1.1e+02 Score=22.68 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=50.8
Q ss_pred EEeecCCCCCcHHHHHHHHHHhhc----cCCCChhHHHHHHHcCC----CcceEEEecCCCCCCCCCCCCCCCCCeEEEE
Q psy8508 40 TFEGRSAIDSDFHGVKQLLKQLFL----KAHINLSELTDVIISQS----NIGSVVKQSTADEDMDDDDDESDVNDVFGIT 111 (246)
Q Consensus 40 DFe~~dp~~~DfhgIk~LL~qlf~----~~~idls~LadlIi~Q~----~vGtvIK~~~~d~~~dd~dd~~~~~dv~g~~ 111 (246)
++.++...+.|+..|..|+.+++. ...+...++.+.+...- .-+.++... +++.+.|++
T Consensus 23 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------~~g~ivG~~ 89 (183)
T 3i9s_A 23 SVEIKRVDKHHCLDLVGIFIELERYYFGDKAASEQDLANYLSHQVFSEHSGVKVIAAV-------------EHDKVLGFA 89 (183)
T ss_dssp CCEEEECCGGGGGGGHHHHHHHHHHHHGGGCCCHHHHHHHHHHTTTSTTCCCEEEEEE-------------ETTEEEEEE
T ss_pred eeEEEEcCHhHHHHHHHHHHHHHHHhccCccccHHHHHHHHHHhhhccCCCceEEEEE-------------ECCEEEEEE
Confidence 355667778899999998887654 24566777777766531 112122221 234677777
Q ss_pred Eeeec------------------CCCCCchHHHHHHHHHHHHHHh
Q psy8508 112 TVINI------------------TNKKHIECVQQLRSLLSELAEE 138 (246)
Q Consensus 112 SvLnl------------------~~~k~~~~i~~l~~yll~k~~~ 138 (246)
.+... ..++....-+.|.+++++.|.+
T Consensus 90 ~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~ 134 (183)
T 3i9s_A 90 TYTIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAIT 134 (183)
T ss_dssp EEEEESCCGGGCEEEEEEEEEECGGGTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCeEEEEeEEECHhhcCCCHHHHHHHHHHHHHHH
Confidence 66532 2233445567777777776654
No 9
>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A*
Probab=35.99 E-value=1.4e+02 Score=22.54 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=50.6
Q ss_pred EeecCCCCCcHHH-HHHHHHHhhccCCCChhHHHHHH---HcCCCcceEEEecCCCCCCCCCCCCCCCCCeEEEEEeeec
Q psy8508 41 FEGRSAIDSDFHG-VKQLLKQLFLKAHINLSELTDVI---ISQSNIGSVVKQSTADEDMDDDDDESDVNDVFGITTVINI 116 (246)
Q Consensus 41 Fe~~dp~~~Dfhg-Ik~LL~qlf~~~~idls~LadlI---i~Q~~vGtvIK~~~~d~~~dd~dd~~~~~dv~g~~SvLnl 116 (246)
+.++.....|+.. |..|+++.+....+....+...+ .....-+.++-..+ .++.+.|++.+...
T Consensus 48 ~~iR~~~~~D~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~------------~~g~ivG~~~~~~~ 115 (190)
T 2vez_A 48 YTIRPLCRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRARSDEYYLLVVCD------------GEGRIVGTGSLVVE 115 (190)
T ss_dssp CEEEECCGGGGGGTHHHHHTTTSCCCCCCHHHHHHHHHHHHTTTTTEEEEEEEC------------TTSCEEEEEEEEEE
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhCCCCcEEEEEEc------------CCCcEEEEEEEEec
Confidence 4556677889999 99999988866566665555533 32333333333211 12568888776431
Q ss_pred -------------------CCCCCchHHHHHHHHHHHHHH
Q psy8508 117 -------------------TNKKHIECVQQLRSLLSELAE 137 (246)
Q Consensus 117 -------------------~~~k~~~~i~~l~~yll~k~~ 137 (246)
..++....-+.|.+++++.|.
T Consensus 116 ~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~ 155 (190)
T 2vez_A 116 RKFIHSLGMVGHIEDIAVEKGQQGKKLGLRIIQALDYVAE 155 (190)
T ss_dssp ECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHH
T ss_pred cccccCCCceEEEEEEEEchhhcCCCHHHHHHHHHHHHHH
Confidence 223445556677777776664
No 10
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=33.71 E-value=1.1e+02 Score=21.90 Aligned_cols=38 Identities=11% Similarity=0.105 Sum_probs=25.6
Q ss_pred EeecCCCCCcHHHHHHHHHHhhcc-------CCCChhHHHHHHHc
Q psy8508 41 FEGRSAIDSDFHGVKQLLKQLFLK-------AHINLSELTDVIIS 78 (246)
Q Consensus 41 Fe~~dp~~~DfhgIk~LL~qlf~~-------~~idls~LadlIi~ 78 (246)
+.+....+.|+..|..|+...+.. ..++...+...+-.
T Consensus 4 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 48 (174)
T 3dr6_A 4 MTIRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEA 48 (174)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHSSTTTTCCCCCCHHHHHHHHHH
T ss_pred eEEeeCChhhHHHHHHHHHHHHHhccccccCCCCCHHHHHHHHHh
Confidence 345667788999999999987532 34566666554443
No 11
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=32.38 E-value=1.4e+02 Score=21.34 Aligned_cols=85 Identities=12% Similarity=0.106 Sum_probs=49.3
Q ss_pred EEeecCCCCCcHHHHHHHHHHhhcc------CCCChhHHHHHHHcCCCcceEEEecCCCCCCCCCCCCCCCCCeEEEEEe
Q psy8508 40 TFEGRSAIDSDFHGVKQLLKQLFLK------AHINLSELTDVIISQSNIGSVVKQSTADEDMDDDDDESDVNDVFGITTV 113 (246)
Q Consensus 40 DFe~~dp~~~DfhgIk~LL~qlf~~------~~idls~LadlIi~Q~~vGtvIK~~~~d~~~dd~dd~~~~~dv~g~~Sv 113 (246)
.+.++...+.|+..|..|+...... ..+....+...+..+..-+.++-.. +++.+.|++.+
T Consensus 10 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-------------~~~~~vG~~~~ 76 (166)
T 2fe7_A 10 TLEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCL-------------SEGRPIGYAVF 76 (166)
T ss_dssp -CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEE-------------ETTEEEEEEEE
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHhhcccccCCccHHHHHHHhhcCCCCceEEEEE-------------eCCeEEEEEEE
Confidence 3567778889999999999875431 2456677877775444333333221 12457777665
Q ss_pred eec------------------CCCCCchHHHHHHHHHHHHHH
Q psy8508 114 INI------------------TNKKHIECVQQLRSLLSELAE 137 (246)
Q Consensus 114 Lnl------------------~~~k~~~~i~~l~~yll~k~~ 137 (246)
... ..++....-..|..++++.+.
T Consensus 77 ~~~~~~~~~~~~~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~ 118 (166)
T 2fe7_A 77 FYSYSTWLGRNGIYLEDLYVTPEYRGVGAGRRLLRELAREAV 118 (166)
T ss_dssp EEEEETTTTEEEEEEEEEEECGGGCC--HHHHHHHHHHHHHH
T ss_pred EeccCCcccCCcEEEEEEEECccccCccHHHHHHHHHHHHHH
Confidence 321 223444555677777766664
No 12
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=31.25 E-value=1.5e+02 Score=21.44 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=25.3
Q ss_pred EeecCCCCCcHHHHHHHHHHhhccCCCC--hhHHHHHHH
Q psy8508 41 FEGRSAIDSDFHGVKQLLKQLFLKAHIN--LSELTDVII 77 (246)
Q Consensus 41 Fe~~dp~~~DfhgIk~LL~qlf~~~~id--ls~LadlIi 77 (246)
+.++.....|...|..|+.+.+...... ...+...+-
T Consensus 21 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 59 (165)
T 1s3z_A 21 MDIRQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQ 59 (165)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSTTSCHHHHHHHHHHHHH
T ss_pred EEEEeCchhhHHHHHHHHHHHhccCCcHHHHHHHHHHhc
Confidence 5566778899999999999988664322 133444443
No 13
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=30.80 E-value=1.4e+02 Score=21.09 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=25.6
Q ss_pred ecCCCCCcHHHHHHHHHHhhc-------------cCCCChhHHHHHHHcC
Q psy8508 43 GRSAIDSDFHGVKQLLKQLFL-------------KAHINLSELTDVIISQ 79 (246)
Q Consensus 43 ~~dp~~~DfhgIk~LL~qlf~-------------~~~idls~LadlIi~Q 79 (246)
++...+.|...|..|+.+.+. ...+....+...+-..
T Consensus 3 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 52 (164)
T 4e0a_A 3 IREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGE 52 (164)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHCTTTBCCCSSSSCHHHHHHHHHCS
T ss_pred EEEcCccCHHHHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHhcCC
Confidence 456678899999999998763 1234556677766543
No 14
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=28.40 E-value=1.2e+02 Score=21.61 Aligned_cols=83 Identities=19% Similarity=0.161 Sum_probs=43.5
Q ss_pred EeecCCCCCcHHHHHHHHHHhhcc---------CCCChhHHHHHHHcCCCcceEEEecCCCCCCCCCCCCCCCCCeEEEE
Q psy8508 41 FEGRSAIDSDFHGVKQLLKQLFLK---------AHINLSELTDVIISQSNIGSVVKQSTADEDMDDDDDESDVNDVFGIT 111 (246)
Q Consensus 41 Fe~~dp~~~DfhgIk~LL~qlf~~---------~~idls~LadlIi~Q~~vGtvIK~~~~d~~~dd~dd~~~~~dv~g~~ 111 (246)
+.++...+.|+..|..|+.+.+.. .......+.. +.....-..+|-. +++.+.|++
T Consensus 5 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~--------------~~~~~vG~~ 69 (160)
T 3f8k_A 5 IKIRKATKEDWEKIYQLYNSLSDEDLYLRFFHLYRITEEDAKK-IASNEDHVTFLAE--------------VDGKVVGEA 69 (160)
T ss_dssp CEEEECCGGGHHHHHHHHHHSCHHHHHHHTHHHHHTC------------CEEEEEEE--------------ETTEEEEEE
T ss_pred EEEEECCcchHHHHHHHHHhccccccceeeccccccCHHHHHH-HhccCCceEEEEE--------------ECCeEEEEE
Confidence 456677889999999999986532 2345556665 4333322222222 235788888
Q ss_pred Eeeec--------CCCCCchHHHHHHHHHHHHHHh
Q psy8508 112 TVINI--------TNKKHIECVQQLRSLLSELAEE 138 (246)
Q Consensus 112 SvLnl--------~~~k~~~~i~~l~~yll~k~~~ 138 (246)
.+.+. ..++....-+.|.+++++.|++
T Consensus 70 ~~~~~~~~~~~v~p~~rg~Gig~~ll~~~~~~~~~ 104 (160)
T 3f8k_A 70 SLHKDGEFSLVVHRNYRTLGIGTLLVKTLIEEAKK 104 (160)
T ss_dssp EEETTSBEEEEECGGGTTSSHHHHHHHHHHHHHHH
T ss_pred EeecceEEEEEECHHHcCCCHHHHHHHHHHHHHHH
Confidence 77541 1233445556777777776643
No 15
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*
Probab=28.28 E-value=1.6e+02 Score=20.99 Aligned_cols=86 Identities=19% Similarity=0.230 Sum_probs=51.0
Q ss_pred EeecCCCCCcHH-HHHHHHHHhhccCCCChhHHHHHHH---cCCCcceEEEecCCCCCCCCCCCCCCCCCeEEEEEeee-
Q psy8508 41 FEGRSAIDSDFH-GVKQLLKQLFLKAHINLSELTDVII---SQSNIGSVVKQSTADEDMDDDDDESDVNDVFGITTVIN- 115 (246)
Q Consensus 41 Fe~~dp~~~Dfh-gIk~LL~qlf~~~~idls~LadlIi---~Q~~vGtvIK~~~~d~~~dd~dd~~~~~dv~g~~SvLn- 115 (246)
+.++.....|+. .+..|+.++.....+....+...+. ....-..++... +. +++.+.|++++.-
T Consensus 22 ~~iR~~~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~---------~~~~ivG~~~~~~~ 90 (165)
T 4ag7_A 22 FKVRPLAKDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRTSVPNYHIVVIE--DS---------NSQKVVASASLVVE 90 (165)
T ss_dssp EEEEECBGGGGTTTHHHHHHHHSCCTTCCHHHHHHHHHHHHTCSSCCEEEEEE--ET---------TTTEEEEEEEEEEE
T ss_pred EEEeeCCHhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhcCCCceEEEEEE--eC---------CCCeEEEEEEEEec
Confidence 556777888999 6999999887766666666655443 221222222221 00 1357888888751
Q ss_pred ---------------c---CCCCCchHHHHHHHHHHHHHH
Q psy8508 116 ---------------I---TNKKHIECVQQLRSLLSELAE 137 (246)
Q Consensus 116 ---------------l---~~~k~~~~i~~l~~yll~k~~ 137 (246)
+ ..++....-+.|.+++++.|+
T Consensus 91 ~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~ 130 (165)
T 4ag7_A 91 MKFIHGAGSRGRVEDVVVDTEMRRQKLGAVLLKTLVSLGK 130 (165)
T ss_dssp ECSHHHHCEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEEEEEEECHHhcCCCHHHHHHHHHHHHHH
Confidence 1 234445556677777776664
No 16
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=27.83 E-value=1.7e+02 Score=21.10 Aligned_cols=87 Identities=13% Similarity=0.017 Sum_probs=49.8
Q ss_pred EeecCCCCCcHHHHHHHHH-----HhhccCCCC--hhHHHHHHHcCCCcceEEEecCCCCCCCCCCCCCCCCCeEEEEEe
Q psy8508 41 FEGRSAIDSDFHGVKQLLK-----QLFLKAHIN--LSELTDVIISQSNIGSVVKQSTADEDMDDDDDESDVNDVFGITTV 113 (246)
Q Consensus 41 Fe~~dp~~~DfhgIk~LL~-----qlf~~~~id--ls~LadlIi~Q~~vGtvIK~~~~d~~~dd~dd~~~~~dv~g~~Sv 113 (246)
+.++.+.+.|...|..++. +++...+.. ...+...++.+..-+..+-+.. +. .++.+.|++++
T Consensus 14 i~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~iG~~~~ 83 (164)
T 3eo4_A 14 IIIRQITDNDLELLMAWRSNPLIYKFFYIQKEPLKWEEHYSWWMSRENRVDWIILLR-EN---------NTIRKVGSVNV 83 (164)
T ss_dssp EEEEECCGGGHHHHHHHHTCHHHHTTSTTCCSCCCHHHHHHHHHHCCSCEEEEEEEE-ET---------TEEEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHcCHHHHHhccCCCCChhHHHHHHHHhcCCCCceEEEEEE-ec---------CCCcEEEEEEE
Confidence 5567788899999999883 333333333 3366666555544323322210 00 23568888877
Q ss_pred eecC-------------CCCCchHHHHHHHHHHHHHH
Q psy8508 114 INIT-------------NKKHIECVQQLRSLLSELAE 137 (246)
Q Consensus 114 Lnl~-------------~~k~~~~i~~l~~yll~k~~ 137 (246)
.... .++....-..|...+++.|+
T Consensus 84 ~~~~~~~~~i~~~v~~~~~rg~Gig~~ll~~~~~~a~ 120 (164)
T 3eo4_A 84 SQLNTDNPEIGILIGEFFLWGKHIGRHSVSLVLKWLK 120 (164)
T ss_dssp ECTTSSSCEEEEEECSTTSTTSSHHHHHHHHHHHHHH
T ss_pred EecCCCcEEEEEEEcCHHHcCccHHHHHHHHHHHHHH
Confidence 5432 45555566777777777663
No 17
>1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E*
Probab=26.77 E-value=2.1e+02 Score=21.67 Aligned_cols=39 Identities=23% Similarity=0.301 Sum_probs=29.8
Q ss_pred EeecCCCCCcHHHHHHHHHHhhcc----CCCChhHHHHHHHcC
Q psy8508 41 FEGRSAIDSDFHGVKQLLKQLFLK----AHINLSELTDVIISQ 79 (246)
Q Consensus 41 Fe~~dp~~~DfhgIk~LL~qlf~~----~~idls~LadlIi~Q 79 (246)
+.++.....|+..|..|....|.. ..+....+...+-..
T Consensus 35 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (207)
T 1kux_A 35 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLC 77 (207)
T ss_dssp CEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHC
T ss_pred eEEecCCHHHHHHHHHHHHHHcCCcccccccCHHHHHHHHhhC
Confidence 456777889999999999988764 367777887777543
No 18
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}
Probab=25.84 E-value=2.1e+02 Score=21.51 Aligned_cols=65 Identities=18% Similarity=0.267 Sum_probs=38.6
Q ss_pred EeecCCCCCcHHHHHHHHHHhhccCC-C---------ChhHHHHHHHcCCCcceEEEecCCCCCCCCCCCCCCCCCeEEE
Q psy8508 41 FEGRSAIDSDFHGVKQLLKQLFLKAH-I---------NLSELTDVIISQSNIGSVVKQSTADEDMDDDDDESDVNDVFGI 110 (246)
Q Consensus 41 Fe~~dp~~~DfhgIk~LL~qlf~~~~-i---------dls~LadlIi~Q~~vGtvIK~~~~d~~~dd~dd~~~~~dv~g~ 110 (246)
+.++...+.|+..|..|+.+.|.... + ...++...+.....-|.++... +. +++.+.|+
T Consensus 7 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~--~~---------~~g~ivG~ 75 (217)
T 4fd4_A 7 IVLRVARLDELEQVREILHRIYYPEEGITISYVHGKSHTLDDERFSLSFVEQGTVVVAE--DS---------AAKKFIGV 75 (217)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTTTCHHHHHBTTCSSCCHHHHHHHHTTTTTTCEEEEE--ET---------TTTEEEEE
T ss_pred eEEEEcCHHHHHHHHHHHHHhcCCccchhhhccCCCccHHHHHHHHHHHHHCCCeEEEE--EC---------CCCCEEEE
Confidence 45677789999999999999875321 1 1234444444433334443332 10 13679999
Q ss_pred EEeeec
Q psy8508 111 TTVINI 116 (246)
Q Consensus 111 ~SvLnl 116 (246)
+.+...
T Consensus 76 ~~~~~~ 81 (217)
T 4fd4_A 76 SIAGPI 81 (217)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 887554
No 19
>2o28_A Glucosamine 6-phosphate N-acetyltransferase; structural genomics, structural genomics consortium, SGC; HET: 16G COA; 1.80A {Homo sapiens} PDB: 2huz_A* 3cxq_A* 3cxs_A 3cxp_A
Probab=24.00 E-value=1.9e+02 Score=21.48 Aligned_cols=37 Identities=14% Similarity=0.116 Sum_probs=26.9
Q ss_pred EeecCCCCCcHHH-HHHHHHHhhccCCCChhHHHHHHH
Q psy8508 41 FEGRSAIDSDFHG-VKQLLKQLFLKAHINLSELTDVII 77 (246)
Q Consensus 41 Fe~~dp~~~Dfhg-Ik~LL~qlf~~~~idls~LadlIi 77 (246)
+.++.....|+.. |..|+++++....++...+...+.
T Consensus 39 ~~iR~~~~~D~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 76 (184)
T 2o28_A 39 LVLRPLCTADLNRGFFKVLGQLTETGVVSPEQFMKSFE 76 (184)
T ss_dssp EEEEECBGGGGGTTHHHHHTTTSCCCCCCHHHHHHHHH
T ss_pred eEEEECCHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 4456667788887 999999888766777766666554
No 20
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=20.82 E-value=61 Score=24.85 Aligned_cols=28 Identities=29% Similarity=0.264 Sum_probs=23.9
Q ss_pred EEEEEeecCCC--CCcHHHHHHHHHHhhcc
Q psy8508 37 IQVTFEGRSAI--DSDFHGVKQLLKQLFLK 64 (246)
Q Consensus 37 v~vDFe~~dp~--~~DfhgIk~LL~qlf~~ 64 (246)
-+.-|-|.+|. -.|.+.||.+|++++..
T Consensus 73 ~~~~F~Ftn~~~a~~erd~VKd~L~~~l~~ 102 (108)
T 1pfj_A 73 DTTNFHFSNESTAVKERDAVKDLLQQLLPK 102 (108)
T ss_dssp CEEEEECCCSSCTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCcHHHHHHHHHHHHHHHHHHHH
Confidence 46789999996 36999999999999864
Done!