BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8516
(451 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 593 bits (1530), Expect = e-170, Method: Compositional matrix adjust.
Identities = 298/470 (63%), Positives = 349/470 (74%), Gaps = 47/470 (10%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M SRRWFHP+I+GVEAE LLL RG DGSFL RPS+SNPGD TLSVR NG VTHIKIQNTG
Sbjct: 1 MKSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTG 60
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGK 120
D YDLYGGEKFATL+ELVQ+YME+ GQLK++N +VIELKYPL+CADPT+ERWFHG LSGK
Sbjct: 61 DYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGK 120
Query: 121 EAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDD-- 178
EAE+L+ +KGK+GSFL VRESQS PGDFVLSVRT D
Sbjct: 121 EAEKLLTEKGKHGSFL-----------------------VRESQSHPGDFVLSVRTGDDK 157
Query: 179 --------KVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 230
KVTHVMIRCQ KYDVGGGE+FDSLT L+EHYK+NPMVET GTV+ LKQP N
Sbjct: 158 GESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLN 217
Query: 231 ATRITVSNIHDRVTELQK----ENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKN 286
TRI + I RV EL K + K GFWEEFE+LQQQE + L++R+EGQ+ +N+NKN
Sbjct: 218 TTRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKN 277
Query: 287 RYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSE--------DGGKSYIATQGCLPST 338
RYKNILPFDHTRV L D D + P ++YINAN I E KSYIATQGCL +T
Sbjct: 278 RYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNT 337
Query: 339 MNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYI 398
+NDFW MV+QEN RVIVMTTKE+ERGK+KC KYWPD++ K YG + V N+ ES DY
Sbjct: 338 VNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYT 397
Query: 399 LREFLVSKGSE--SPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
LRE +SK + + R ++ YHF+ WPDHGVPSDPG VL+FL EV+ +Q+
Sbjct: 398 LRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQE 447
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 500 bits (1287), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/468 (52%), Positives = 327/468 (69%), Gaps = 45/468 (9%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYD 64
RWFH +SG++AE LL RG GSFL RPSR N GDF+LSVR+ +VTHI+IQN+GD YD
Sbjct: 3 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 62
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQ 124
LYGGEKFATL+ELV++Y + QG L+ R+ +I LKYPL+C+DPT+ERW+HG +SG +AE
Sbjct: 63 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAET 122
Query: 125 LILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDD------ 178
L+ KG+ +F LVRES S+PGDFVLSV +D
Sbjct: 123 LLQAKGEPWTF-----------------------LVRESLSQPGDFVLSVLSDQPKAGPG 159
Query: 179 ---KVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRIT 235
+VTH+ + C+ +Y VGG E FDSLT L+EH+K+ + E SG V+L+QP+ ATR+
Sbjct: 160 SPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVN 219
Query: 236 VSNIHDRVTELQK----ENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNI 291
++I +RV EL K E+++KAGFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNI
Sbjct: 220 AADIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNI 279
Query: 292 LPFDHTRVKLKDVDEDVPGAEYINANYIQSE-----DGGKSYIATQGCLPSTMNDFWSMV 346
LPFDH+RV L+ D ++PG++YINANYI+++ + K+YIA+QGCL +T+NDFW M
Sbjct: 280 LPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMA 339
Query: 347 WQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS- 405
WQEN RVIVMTT+E+E+G+NKC YWP+ + YG V N E TT+Y LR VS
Sbjct: 340 WQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSP 399
Query: 406 -KGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDI--HAG 450
+ R+I+HY + +WPDHGVPS+PG VL+FL ++N RQ+ HAG
Sbjct: 400 LDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAG 447
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 2 SSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNG---------EVT 52
+S RW+H +SG +AE LL +G +FLVR S S PGDF LSV + VT
Sbjct: 106 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVT 165
Query: 53 HIKIQNTGDCYDLYGGEKFATLSELVQFY 81
HIK+ G Y + G E F +L++LV+ +
Sbjct: 166 HIKVMCEGGRYTVGGLETFDSLTDLVEHF 194
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/468 (52%), Positives = 327/468 (69%), Gaps = 45/468 (9%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYD 64
RWFH +SG++AE LL RG GSFL RPSR N GDF+LSVR+ +VTHI+IQN+GD YD
Sbjct: 3 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 62
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQ 124
LYGGEKFATL+ELV++Y + QG L+ R+ +I LKYPL+C+DPT+ERW+HG +SG +AE
Sbjct: 63 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMSGGQAET 122
Query: 125 LILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDD------ 178
L+ KG+ +F LVRES S+PGDFVLSV +D
Sbjct: 123 LLQAKGEPWTF-----------------------LVRESLSQPGDFVLSVLSDQPKAGPG 159
Query: 179 ---KVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRIT 235
+VTH+ + C+ +Y VGG E FDSLT L+EH+K+ + E SG V+L+QP+ ATR+
Sbjct: 160 SPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVN 219
Query: 236 VSNIHDRVTELQK----ENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNI 291
++I +RV EL K E+++KAGFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNI
Sbjct: 220 AADIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNI 279
Query: 292 LPFDHTRVKLKDVDEDVPGAEYINANYIQSE-----DGGKSYIATQGCLPSTMNDFWSMV 346
LPFDH+RV L+ D ++PG++YINANYI+++ + K+YIA+QGCL +T+NDFW M
Sbjct: 280 LPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMA 339
Query: 347 WQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK 406
WQEN RVIVMTT+E+E+G+NKC YWP+ + YG V N E TT+Y LR VS
Sbjct: 340 WQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSP 399
Query: 407 --GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDI--HAG 450
+ R+I+HY + +WPDHGVPS+PG VL+FL ++N RQ+ HAG
Sbjct: 400 LDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAG 447
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 2 SSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNG---------EVT 52
+S RW+H +SG +AE LL +G +FLVR S S PGDF LSV + VT
Sbjct: 106 TSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVT 165
Query: 53 HIKIQNTGDCYDLYGGEKFATLSELVQFY 81
HIK+ G Y + G E F +L++LV+ +
Sbjct: 166 HIKVMCEGGRYTVGGLETFDSLTDLVEHF 194
>pdb|3B7O|A Chain A, Crystal Structure Of The Human Tyrosine Phosphatase Shp2
(Ptpn11) With An Accessible Active Site
Length = 316
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/204 (59%), Positives = 152/204 (74%), Gaps = 10/204 (4%)
Query: 253 KAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAE 312
K GFWEEFE+LQQQE + L++R+EGQ+ +N+NKNRYKNILPFDHTRV L D D + P ++
Sbjct: 31 KQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSD 90
Query: 313 YINANYIQSE--------DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERG 364
YINAN I E KSYIATQGCL +T+NDFW MV+QEN RVIVMTTKE+ERG
Sbjct: 91 YINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERG 150
Query: 365 KNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSE--SPRKIYHYHFQAW 422
K+KC KYWPD++ K YG + V N+ ES DY LRE +SK + + R ++ YHF+ W
Sbjct: 151 KSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTW 210
Query: 423 PDHGVPSDPGCVLNFLYEVNTRQD 446
PDHGVPSDPG VL+FL EV+ +Q+
Sbjct: 211 PDHGVPSDPGGVLDFLEEVHHKQE 234
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 151/206 (73%), Gaps = 9/206 (4%)
Query: 254 AGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEY 313
+GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNILPFDH+RV L+ D ++PG++Y
Sbjct: 2 SGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDY 61
Query: 314 INANYIQSE-----DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKC 368
INANYI+++ + K+YIA+QGCL +T+NDFW M WQEN RVIVMTT+E+E+G+NKC
Sbjct: 62 INANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKC 121
Query: 369 AKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK--GSESPRKIYHYHFQAWPDHG 426
YWP+ + YG V N E TT+Y LR VS + R+I+HY + +WPDHG
Sbjct: 122 VPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHG 181
Query: 427 VPSDPGCVLNFLYEVNTRQD--IHAG 450
VPS+PG VL+FL ++N RQ+ HAG
Sbjct: 182 VPSEPGGVLSFLDQINQRQESLPHAG 207
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 151/206 (73%), Gaps = 9/206 (4%)
Query: 254 AGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEY 313
+GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNILPFDH+RV L+ D ++PG++Y
Sbjct: 22 SGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDY 81
Query: 314 INANYIQSE-----DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKC 368
INANYI+++ + K+YIA+QGCL +T+NDFW M WQEN RVIVMTT+E+E+G+NKC
Sbjct: 82 INANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKC 141
Query: 369 AKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK--GSESPRKIYHYHFQAWPDHG 426
YWP+ + YG V N E TT+Y LR VS + R+I+HY + +WPDHG
Sbjct: 142 VPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHG 201
Query: 427 VPSDPGCVLNFLYEVNTRQD--IHAG 450
VPS+PG VL+FL ++N RQ+ HAG
Sbjct: 202 VPSEPGGVLSFLDQINQRQESLPHAG 227
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 150/205 (73%), Gaps = 9/205 (4%)
Query: 255 GFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYI 314
GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNILPFDH+RV L+ D ++PG++YI
Sbjct: 1 GFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYI 60
Query: 315 NANYIQSE-----DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCA 369
NANYI+++ + K+YIA+QGCL +T+NDFW M WQEN RVIVMTT+E+E+G+NKC
Sbjct: 61 NANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCV 120
Query: 370 KYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK--GSESPRKIYHYHFQAWPDHGV 427
YWP+ + YG V N E TT+Y LR VS + R+I+HY + +WPDHGV
Sbjct: 121 PYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGV 180
Query: 428 PSDPGCVLNFLYEVNTRQD--IHAG 450
PS+PG VL+FL ++N RQ+ HAG
Sbjct: 181 PSEPGGVLSFLDQINQRQESLPHAG 205
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 150/205 (73%), Gaps = 9/205 (4%)
Query: 255 GFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYI 314
GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNILPFDH+RV L+ D ++PG++YI
Sbjct: 1 GFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYI 60
Query: 315 NANYIQSE-----DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCA 369
NANYI+++ + K+YIA+QGCL +T+NDFW M WQEN RVIVMTT+E+E+G+NKC
Sbjct: 61 NANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCV 120
Query: 370 KYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK--GSESPRKIYHYHFQAWPDHGV 427
YWP+ + YG V N E TT+Y LR VS + R+I+HY + +WPDHGV
Sbjct: 121 PYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGV 180
Query: 428 PSDPGCVLNFLYEVNTRQD--IHAG 450
PS+PG VL+FL ++N RQ+ HAG
Sbjct: 181 PSEPGGVLSFLDQINQRQESLPHAG 205
>pdb|3O5X|A Chain A, Crystal Structure Of The Oncogenic Tyrosine Phosphatase
Shp2 Complexed With A Salicylic Acid-Based Small
Molecule Inhibitor
pdb|3MOW|A Chain A, Crystal Structure Of Shp2 In Complex With A Tautomycetin
Analog Ttn D- 1
Length = 276
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 137/186 (73%), Gaps = 10/186 (5%)
Query: 271 LFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSE-------- 322
L++R+EGQ+ +N+NKNRYKNILPFDHTRV L D D + P ++YINAN I E
Sbjct: 2 LYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNS 61
Query: 323 DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYG 382
KSYIATQGCL +T+NDFW MV+QEN RVIVMTTKE+ERGK+KC KYWPD++ K YG
Sbjct: 62 KPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYG 121
Query: 383 AVCVNNMYESVTTDYILREFLVSKGSE--SPRKIYHYHFQAWPDHGVPSDPGCVLNFLYE 440
+ V N+ ES DY LRE +SK + + R ++ YHF+ WPDHGVPSDPG VL+FL E
Sbjct: 122 VMRVRNVKESAAHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEE 181
Query: 441 VNTRQD 446
V+ +Q+
Sbjct: 182 VHHKQE 187
>pdb|3TL0|A Chain A, Structure Of Shp2 N-Sh2 Domain In Complex With Rlnpyaqlwhr
Peptide
pdb|3TKZ|A Chain A, Structure Of The Shp-2 N-Sh2 Domain In A 1:2 Complex With
Rvipyfvplnr Peptide
Length = 109
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 97/106 (91%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M+SRRWFHP+I+GVEAE LLL RG DGSFL RPS+SNPGDFTLSVR NG VTHIKIQNTG
Sbjct: 4 MTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTG 63
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCAD 106
D YDLYGGEKFATL+ELVQ+YME+ GQLK++N +VIELKYPL+CAD
Sbjct: 64 DYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCAD 109
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 68/127 (53%), Gaps = 25/127 (19%)
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
T+ RWFH ++G EAE L+L + G +GSFL R S+S P
Sbjct: 5 TSRRWFHPNITGVEAENLLLTR-----------------------GVDGSFLARPSKSNP 41
Query: 168 GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHY--KRNPMVETSGTVVHL 225
GDF LSVR + VTH+ I+ + YD+ GGE+F +L +L+++Y + E +G V+ L
Sbjct: 42 GDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIEL 101
Query: 226 KQPFNAT 232
K P N
Sbjct: 102 KYPLNCA 108
>pdb|1AYA|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYA|B Chain B, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYB|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYC|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
pdb|1AYD|A Chain A, Crystal Structures Of Peptide Complexes Of The Amino-
Terminal Sh2 Domain Of The Syp Tyrosine Phosphatase
Length = 101
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 91/100 (91%)
Query: 4 RRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCY 63
RRWFHP+I+GVEAE LLL RG DGSFL RPS+SNPGDFTLSVR NG VTHIKIQNTGD Y
Sbjct: 2 RRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYY 61
Query: 64 DLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
DLYGGEKFATL+ELVQ+YME+ GQLK++N +VIELKYPL+
Sbjct: 62 DLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLN 101
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 25/122 (20%)
Query: 111 RWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDF 170
RWFH ++G EAE L+L + G +GSFL R S+S PGDF
Sbjct: 3 RWFHPNITGVEAENLLLTR-----------------------GVDGSFLARPSKSNPGDF 39
Query: 171 VLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRN--PMVETSGTVVHLKQP 228
LSVR + VTH+ I+ + YD+ GGE+F +L +L+++Y + + E +G V+ LK P
Sbjct: 40 TLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYP 99
Query: 229 FN 230
N
Sbjct: 100 LN 101
>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
Length = 286
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 130/218 (59%), Gaps = 9/218 (4%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V+++ +T++++ GF EE+E+L + ++ T +E + NRNKNRY NI+
Sbjct: 4 IRVADLLQHITQMKR--GQGYGFKEEYEALPEGQTASWDTAKEDE---NRNKNRYGNIIS 58
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+DH+RV+L +D D P ++YINANYI + YIATQG + T+ DFW M+WQEN
Sbjct: 59 YDHSRVRLLVLDGD-PHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSAS 117
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLV-SKGSESPR 412
IVM T +E G+ KC +YWPDD ++ YG + V + +Y++R F V KG R
Sbjct: 118 IVMVTNLVEVGRVKCVRYWPDD--TEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIR 175
Query: 413 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
++ +HF +WPDHGVP +L F+ +V AG
Sbjct: 176 ELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAG 213
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 107/163 (65%), Gaps = 3/163 (1%)
Query: 281 DNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMN 340
+NR KNRY NILP+D TRVKL +VD+D P ++YINA+YI + + YI TQG LP T +
Sbjct: 66 ENRGKNRYNNILPYDATRVKLSNVDDD-PCSDYINASYIPGNNFRREYIVTQGPLPGTKD 124
Query: 341 DFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILR 400
DFW MVW++NV IVM T+ +E+G+ KC YWP D S YG + + + ESV ++ +R
Sbjct: 125 DFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIR 184
Query: 401 EFLVS--KGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
EF + + ++ R I H+H+ WPDHGVP ++ F+ V
Sbjct: 185 EFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTV 227
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 106/163 (65%), Gaps = 2/163 (1%)
Query: 282 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMND 341
NR KNR+ NILP+DH+R KL+ VD+D G++YINANY+ + + +I TQG L ST +D
Sbjct: 70 NRPKNRFTNILPYDHSRFKLQPVDDD-EGSDYINANYVPGHNSPREFIVTQGPLHSTRDD 128
Query: 342 FWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILRE 401
FW M W+ N R IVM T+ E+G+ KC +YWP+D YG + V + +S D+++ E
Sbjct: 129 FWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWVMTE 188
Query: 402 FLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTR 444
F++ +GSE R + H+HF WPD GVP+ P ++ F+ R
Sbjct: 189 FMLCRGSEQ-RILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDR 230
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 107/163 (65%), Gaps = 3/163 (1%)
Query: 281 DNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMN 340
+NR KNRY NILP+D TRVKL +VD+D P ++YINA+YI + + YI TQG LP T +
Sbjct: 50 ENRGKNRYNNILPYDATRVKLSNVDDD-PCSDYINASYIPGNNFRREYIVTQGPLPGTKD 108
Query: 341 DFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILR 400
DFW MVW++NV IVM T+ +E+G+ KC YWP D S YG + + + ESV ++ +R
Sbjct: 109 DFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIR 168
Query: 401 EFLVS--KGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
EF + + ++ R I H+H+ WPDHGVP ++ F+ V
Sbjct: 169 EFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTV 211
>pdb|1RPM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
pdb|1RPM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
Length = 278
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 125/218 (57%), Gaps = 9/218 (4%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V+++ +T+++ + GF EE+ES + +S +K +NR KNRY NI+
Sbjct: 2 IRVADLLQHITQMK--CAEGYGFKEEYESFFEGQSA---PWDSAKKDENRMKNRYGNIIA 56
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+DH+RV+L+ ++ D ++YIN NYI YIATQG + T+ DFW MVW EN
Sbjct: 57 YDHSRVRLQTIEGDT-NSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTAS 115
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPR 412
I+M T +E G+ KC KYWPDD ++ Y + V + + +Y++R F V K G R
Sbjct: 116 IIMVTNLVEVGRVKCCKYWPDD--TEIYKDIKVTLIETELLAEYVIRTFAVEKRGVHEIR 173
Query: 413 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
+I +HF WPDHGVP +L F+ +V ++ AG
Sbjct: 174 EIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPSAG 211
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 120/216 (55%), Gaps = 8/216 (3%)
Query: 236 VSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFD 295
++++ D + L+ + K F +E+ES+ + FT N+ KNRY N++ +D
Sbjct: 2 ITDLADNIERLKANDGLK--FSQEYESIDPGQQ---FTWENSNLEVNKPKNRYANVIAYD 56
Query: 296 HTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIV 355
H+RV L +D VPG++YINANYI +YIATQG LP TM DFW MVW++ +V
Sbjct: 57 HSRVILTSID-GVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVV 115
Query: 356 MTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPRKI 414
M T+ E+ + KC +YWP ++T G + V + Y +R F + K GS R++
Sbjct: 116 MMTRLEEKSRVKCDQYWP-ARGTETCGLIQVTLLDTVELATYTVRTFALHKSGSSEKREL 174
Query: 415 YHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
+ F AWPDHGVP P +L FL V + AG
Sbjct: 175 RQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAG 210
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 10/240 (4%)
Query: 211 KRNPMVETSGTVVHLKQPF------NATRITVSNIHDRVTELQKENSSKAGFWEEFESLQ 264
+RN MV+T V + + T + N++ + +L + ++ E E
Sbjct: 254 QRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPGESVTAMELEFKL 313
Query: 265 QQESRHLFTRREGQKLD-NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSED 323
S+ +R L N+ KNR NI+P++ TRV L+ + V G++YINA+++
Sbjct: 314 LASSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPI-RGVEGSDYINASFLDGYR 372
Query: 324 GGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA 383
K+YIATQG L + DFW M+W+ N +IVM TK E G+ KC +YWP + ++ Y
Sbjct: 373 QQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSAR-YQY 431
Query: 384 VCVNNMYESVTTDYILREFLVSKGSES-PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVN 442
V+ M E YILREF V+ + R I + F WP+ GVP ++F+ +V+
Sbjct: 432 FVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVH 491
>pdb|3OLR|A Chain A, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|B Chain B, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|C Chain C, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|D Chain D, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OMH|A Chain A, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|B Chain B, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|C Chain C, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|D Chain D, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
Length = 313
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 7/207 (3%)
Query: 245 ELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLDNRNKNRYKNILPFDHTRVK 300
E Q + +K F EF L++Q +++ + +K N KNRYK+ILP+D++RV+
Sbjct: 32 EAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVE 91
Query: 301 LKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKE 360
L + D + YINAN+I+ G K+YIATQG L +T+ DFW M+W+ +V +IVM E
Sbjct: 92 LSLITSD-EDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACME 150
Query: 361 MERGKNKCAKYWPDDHQSKT-YGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHF 419
E GK KC +YW + + + +G V+ E +DYI+R V SE+ R IY +H+
Sbjct: 151 YEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSET-RTIYQFHY 209
Query: 420 QAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ WPDH VPS +L +++V Q+
Sbjct: 210 KNWPDHDVPSSIDPILELIWDVRCYQE 236
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 8/197 (4%)
Query: 247 QKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDE 306
+++ S GF EE+E L+ + + +NR KNRY N+LP+D +RVKL
Sbjct: 37 KQQADSNCGFAEEYEDLKLIGIS--LPKYAAEIAENRGKNRYNNVLPYDISRVKLSVQTH 94
Query: 307 DVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKN 366
+YINANY+ K +IATQG LP+T+ DFW MVW++NV IVM TK +E+G+
Sbjct: 95 ST--DDYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRT 152
Query: 367 KCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--KGSESPRKIYHYHFQAWPD 424
KC +YWP Q++ YG + V E V ++ +R+F+V + SES + +HF +WPD
Sbjct: 153 KCEEYWP-SKQAQDYGDITVAMTSEVVLPEWTIRDFVVKNMQSSES-HPLRQFHFTSWPD 210
Query: 425 HGVPSDPGCVLNFLYEV 441
HGVP ++NF Y V
Sbjct: 211 HGVPDTTDLLINFRYLV 227
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 7/207 (3%)
Query: 245 ELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLDNRNKNRYKNILPFDHTRVK 300
E Q + +K F EF L++Q +++ + +K N KNRYK+ILP+D++RV+
Sbjct: 32 EAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVE 91
Query: 301 LKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKE 360
L + D + YINAN+I+ G K+YIATQG L +T+ DFW M+W+ +V +IVM E
Sbjct: 92 LSLITSD-EDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACME 150
Query: 361 MERGKNKCAKYWPDDHQSKT-YGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHF 419
E GK KC +YW + + + +G V+ E +DYI+R V SE+ R IY +H+
Sbjct: 151 YEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSET-RTIYQFHY 209
Query: 420 QAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ WPDH VPS +L +++V Q+
Sbjct: 210 KNWPDHDVPSSIDPILELIWDVRCYQE 236
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 7/207 (3%)
Query: 245 ELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLDNRNKNRYKNILPFDHTRVK 300
E Q + +K F EF L++Q +++ + +K N KNRYK+ILP+D++RV+
Sbjct: 13 EAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVE 72
Query: 301 LKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKE 360
L + D + YINAN+I+ G K+YIATQG L +T+ DFW M+W+ +V +IVM E
Sbjct: 73 LSLITSD-EDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACME 131
Query: 361 MERGKNKCAKYWPDDHQSKT-YGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHF 419
E GK KC +YW + + + +G V+ E +DYI+R V SE+ R IY +H+
Sbjct: 132 YEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSET-RTIYQFHY 190
Query: 420 QAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ WPDH VPS +L +++V Q+
Sbjct: 191 KNWPDHDVPSSIDPILELIWDVRCYQE 217
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 122/207 (58%), Gaps = 7/207 (3%)
Query: 245 ELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLDNRNKNRYKNILPFDHTRVK 300
E Q + +K F EF L++Q +++ + +K N KNRYK+ILP+D++RV+
Sbjct: 13 EAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVE 72
Query: 301 LKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKE 360
L + D + YINAN+I+ G K+YIATQG L +T+ DFW M+W+ +V +IVM E
Sbjct: 73 LSLITSD-EDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACME 131
Query: 361 MERGKNKCAKYWPDDHQSKT-YGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHF 419
E GK KC +YW + + + +G V+ E +DYI+R V SE+ R IY +H+
Sbjct: 132 YEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSET-RTIYQFHY 190
Query: 420 QAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ WPDH VPS +L +++V Q+
Sbjct: 191 KNWPDHDVPSSIDPILELIWDVRCYQE 217
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 102/163 (62%), Gaps = 8/163 (4%)
Query: 281 DNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMN 340
+NR KNRY NILP+D TRVKL G++YINA+YI + + YI TQG LP T +
Sbjct: 52 ENRGKNRYNNILPYDATRVKLSG------GSDYINASYIPGNNFRREYIVTQGPLPGTKD 105
Query: 341 DFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILR 400
DFW MVW++NV IVM T+ +E+G+ KC YWP D S YG + + + ESV ++ +R
Sbjct: 106 DFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIR 165
Query: 401 EFLVS--KGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
EF + + ++ R I H+H+ WPDHGVP ++ F+ V
Sbjct: 166 EFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTV 208
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 115/203 (56%), Gaps = 7/203 (3%)
Query: 249 ENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDV 308
+ S GF EE+ES + +S ++ Q NR KNRY NI+ +DH+RV L+ V++D
Sbjct: 39 KTSDSYGFKEEYESFFEGQSASWDVAKKDQ---NRAKNRYGNIIAYDHSRVILQPVEDD- 94
Query: 309 PGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKC 368
P ++YINANYI YIATQG + T+ DFW M+WQE IVM T +E G+ KC
Sbjct: 95 PSSDYINANYIDGYQRPSHYIATQGPVHETVYDFWRMIWQEQSACIVMVTNLVEVGRVKC 154
Query: 369 AKYWPDDHQSKTYGAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGV 427
KYWPDD ++ YG V + +Y++R F L +G R++ +HF WPDHGV
Sbjct: 155 YKYWPDD--TEVYGDFKVTCVEMEPLAEYVVRTFTLERRGYNEIREVKQFHFTGWPDHGV 212
Query: 428 PSDPGCVLNFLYEVNTRQDIHAG 450
P +L+F+ V AG
Sbjct: 213 PYHATGLLSFIRRVKLSNPPSAG 235
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/218 (38%), Positives = 119/218 (54%), Gaps = 8/218 (3%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I + + D + L+ ++ K F +E+ES+ + FT N+ KNRY N++
Sbjct: 9 IPILELADHIERLKANDNLK--FSQEYESIDPGQQ---FTWEHSNLEVNKPKNRYANVIA 63
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+DH+RV L + E +PG++Y+NANYI +YIATQG LP T DFW M+W++
Sbjct: 64 YDHSRVLLSAI-EGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSAT 122
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPR 412
+VM TK ER + KC +YWP ++T+G V V + Y +R F + K GS R
Sbjct: 123 VVMMTKLEERSRVKCDQYWP-SRGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKR 181
Query: 413 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
++ + F AWPDHGVP P L FL V T AG
Sbjct: 182 EVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAG 219
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 123/227 (54%), Gaps = 16/227 (7%)
Query: 225 LKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRN 284
L P + I V + EL N + GF E+FE +Q+ + T +N++
Sbjct: 2 LPIPDDMEAIPVKQFVKHIGELYSNN--QHGFSEDFEEVQRCTADMNITAEHSNHPENKH 59
Query: 285 KNRYKNILPFDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFW 343
KNRY NIL +DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW
Sbjct: 60 KNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFW 119
Query: 344 SMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFL 403
M+W++N +IVM T +E+G+ KC +YWP ++ S+ YG + V + Y +R F
Sbjct: 120 RMIWEQNTGIIVMITNLVEKGRRKCDQYWPTEN-SEEYGNIIVTLKSTKIHACYTVRRFS 178
Query: 404 V------------SKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
+ KG ++ R + YH+ WPD GVP VL F+
Sbjct: 179 IRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV 225
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 111/201 (55%), Gaps = 12/201 (5%)
Query: 256 FWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYIN 315
F EEF SL + F K +NR KNRY NILP DH+RV L +D +P ++YIN
Sbjct: 30 FREEFNSLPSGHIQGTFEL--ANKEENREKNRYPNILPNDHSRVILSQLD-GIPCSDYIN 86
Query: 316 ANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD 375
A+YI +IA QG T+NDFW MVW++ IVM T ER + KC +YWP D
Sbjct: 87 ASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKCHQYWP-D 145
Query: 376 HQSKTYG--AVCVNNMYESVTTDYILREFLVSK----GSESPRKIYHYHFQAWPDHGVPS 429
TYG VCV + V DY +R+F + G ++PR + HF +WPD GVP
Sbjct: 146 QGCWTYGNIRVCVEDCV--VLVDYTIRKFCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPF 203
Query: 430 DPGCVLNFLYEVNTRQDIHAG 450
P +L FL +V T +HAG
Sbjct: 204 TPIGMLKFLKKVKTLNPVHAG 224
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 211 KRNPMVETSGTVVHLKQP------FNATRITVSNIHDRVTELQKENS--SKAGFWEEFES 262
+R MV+T + Q + T + VS++ + + + K G EEF
Sbjct: 268 QRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEKHLQTMHGTTTHFDKIGLEEEFRK 327
Query: 263 LQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSE 322
L R G N K R I+P+D RV L + +YINA++I
Sbjct: 328 LTNVRIMKE-NMRTGNLPANMKKARVIQIIPYDFNRVIL-SMKRGQEYTDYINASFIDGY 385
Query: 323 DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYG 382
+IATQG L T+ DFW M+W+ IVM T+ ER ++KC +YWP + S T+G
Sbjct: 386 RQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQEREQDKCYQYWPTE-GSVTHG 444
Query: 383 AVCVNNMYESVTTDYILREFLV------SKGSESPRKIYHYHFQAWPDHGVPSDPGCVLN 436
+ + ++++ +R+FLV ++ E R + +HF WP+ G+P++ +++
Sbjct: 445 EITIEIKNDTLSEAISIRDFLVTLNQPQARQGEQVRVVRQFHFHGWPEIGIPAEGKGMID 504
Query: 437 FLYEVNTRQ 445
+ V +Q
Sbjct: 505 LIAAVQKQQ 513
>pdb|2NZ6|A Chain A, Crystal Structure Of The Ptprj Inactivating Mutant C1239s
Length = 316
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 116/197 (58%), Gaps = 8/197 (4%)
Query: 247 QKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDE 306
+++ S GF EE+E L+ + + +NR KNRY N+LP+D +RVKL
Sbjct: 37 KQQADSNCGFAEEYEDLKLVGISQ--PKYAAELAENRGKNRYNNVLPYDISRVKLSVQTH 94
Query: 307 DVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKN 366
+YINANY+ K +IATQG LP+T+ DFW MVW++NV I+M TK +E+G+
Sbjct: 95 ST--DDYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRT 152
Query: 367 KCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--KGSESPRKIYHYHFQAWPD 424
KC +YWP Q++ YG + V E V ++ +R+F V + SES + +HF +WPD
Sbjct: 153 KCEEYWP-SKQAQDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSES-HPLRQFHFTSWPD 210
Query: 425 HGVPSDPGCVLNFLYEV 441
HGVP ++NF Y V
Sbjct: 211 HGVPDTTDLLINFRYLV 227
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 16/218 (7%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V + EL N + GF E+FE +Q+ + T +N++KNRY NIL
Sbjct: 10 IPVKQFVKHIGELYSNN--QHGFSEDFEEVQRSTADMNITAEHSNHPENKHKNRYINILA 67
Query: 294 FDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVR 352
+DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW M+W++N
Sbjct: 68 YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTG 127
Query: 353 VIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLV-------- 404
+IVM T +E+G+ KC +YWP ++ ++ YG + V + Y +R F +
Sbjct: 128 IIVMITNLVEKGRRKCDQYWPTEN-TEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKG 186
Query: 405 ----SKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
KG ++ R + YH+ WPD GVP VL F+
Sbjct: 187 QKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV 224
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 120/218 (55%), Gaps = 16/218 (7%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V + EL N + GF E+FE +Q+ + T +N++KNRY NIL
Sbjct: 10 IPVKQFVKHIGELYSNN--QHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILA 67
Query: 294 FDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVR 352
+DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW M+W++N
Sbjct: 68 YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTG 127
Query: 353 VIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLV-------- 404
+IVM T +E+G+ KC +YWP ++ S+ YG + V + Y +R F +
Sbjct: 128 IIVMITNLVEKGRRKCDQYWPTEN-SEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKG 186
Query: 405 ----SKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
KG ++ R + YH+ WPD GVP VL F+
Sbjct: 187 QKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV 224
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 120/218 (55%), Gaps = 16/218 (7%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V + EL N + GF E+FE +Q+ + T +N++KNRY NIL
Sbjct: 3 IPVKQFVKHIGELYSNN--QHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILA 60
Query: 294 FDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVR 352
+DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW M+W++N
Sbjct: 61 YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTG 120
Query: 353 VIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLV-------- 404
+IVM T +E+G+ KC +YWP ++ S+ YG + V + Y +R F +
Sbjct: 121 IIVMITNLVEKGRRKCDQYWPTEN-SEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKG 179
Query: 405 ----SKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
KG ++ R + YH+ WPD GVP VL F+
Sbjct: 180 QKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV 217
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 16/162 (9%)
Query: 277 GQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLP 336
QK N+ KNR +++P + RV L + + G +YINA+YI +I TQ LP
Sbjct: 345 AQKECNKEKNRNSSVVPSERARVGLAPL-PGMKGTDYINASYIMGYYRSNEFIITQHPLP 403
Query: 337 STMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA----------VCV 386
T DFW M+W N ++IVM +++ YWP +S A +C+
Sbjct: 404 HTTKDFWRMIWDHNAQIIVMLPDNQSLAEDEFV-YWPSREESMNCEAFTVTLISKDRLCL 462
Query: 387 NNMYESVTTDYILREFLVSKGSESPRKIYHYHFQAWPDHGVP 428
+N + + D+IL + + ++ H+ WP+ P
Sbjct: 463 SNEEQIIIHDFILE----ATQDDYVLEVRHFQCPKWPNPDAP 500
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 14/202 (6%)
Query: 250 NSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDV-DEDV 308
++++ GF E+FE +Q+ + T +N++KNRY NIL +DH+RVKL+ + +D
Sbjct: 35 SNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDS 94
Query: 309 PGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKC 368
++YINANY+ + K+YIATQG L ST DFW M+W++N +IVM T +E+G+ KC
Sbjct: 95 KHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKC 154
Query: 369 AKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLV------------SKGSESPRKIYH 416
+YWP ++ S+ YG + V + Y +R F + KG ++ R +
Sbjct: 155 DQYWPTEN-SEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQ 213
Query: 417 YHFQAWPDHGVPSDPGCVLNFL 438
YH+ WPD GVP VL F+
Sbjct: 214 YHYTQWPDMGVPEYALPVLTFV 235
>pdb|3BRH|A Chain A, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
pdb|3BRH|B Chain B, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
Length = 310
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 7/207 (3%)
Query: 245 ELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLDNRNKNRYKNILPFDHTRVK 300
E Q + +K F EF L++Q +++ + +K N KNRYK+ILP+D++RV+
Sbjct: 13 EAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVE 72
Query: 301 LKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKE 360
L + D + YINAN+I+ G K+YIATQG L +T+ DFW M+W+ +V +IVM E
Sbjct: 73 LSLITSD-EDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACME 131
Query: 361 MERGKNKCAKYWPDDHQSKT-YGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHF 419
E GK KC +YW + + + +G V+ E +DYI+R V SE+ R IY +H+
Sbjct: 132 YEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSET-RTIYQFHY 190
Query: 420 QAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ WP H VPS +L +++V Q+
Sbjct: 191 KNWPAHDVPSSIDPILELIWDVRCYQE 217
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 120/218 (55%), Gaps = 16/218 (7%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V + EL N + GF E+FE +Q+ + T +N++KNRY NIL
Sbjct: 10 IPVKQFVKHIGELYSNN--QHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILA 67
Query: 294 FDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVR 352
+DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW M+W++N
Sbjct: 68 YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTG 127
Query: 353 VIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLV-------- 404
+I+M T +E+G+ KC +YWP ++ ++ YG + V + Y +R F +
Sbjct: 128 IIIMITNLVEKGRRKCDQYWPTEN-TEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKG 186
Query: 405 ----SKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
KG ++ R + YH+ WPD GVP VL F+
Sbjct: 187 QKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFV 224
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 122/218 (55%), Gaps = 8/218 (3%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I ++++ + + L+ +S K +E+ES+ + FT N+ KNRY N++
Sbjct: 14 IPITDMAEHMERLKANDSLKLS--QEYESIDPGQQ---FTWEHSNLEANKPKNRYANVIA 68
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+DH+RV L+ + E + G++YINANY+ +YIATQG LP T DFW MVW++
Sbjct: 69 YDHSRVILQPL-EGIMGSDYINANYVDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSAT 127
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPR 412
+VM T+ E+ + KC +YWP + ++TYG + V + + +R F + K GS R
Sbjct: 128 VVMMTRLEEKSRIKCDQYWP-NRGTETYGFIQVTLLDTMELATFCVRTFSLHKNGSSEKR 186
Query: 413 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
++ H+ F AWPDHGVP P L FL V T AG
Sbjct: 187 EVRHFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDAG 224
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Query: 282 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMND 341
N+ KNR NILP++ +RV L+ + V G++YINA++I K+YIATQG L T D
Sbjct: 346 NKFKNRLVNILPYESSRVCLQPI-RGVEGSDYINASFIDGYRQQKAYIATQGPLAETTED 404
Query: 342 FWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILRE 401
FW +W+ N ++VM TK E G+ KC +YWP + ++ Y V+ M E YILRE
Sbjct: 405 FWRALWENNSTIVVMLTKLREMGREKCHQYWPAERSAR-YQYFVVDPMAEYNMPQYILRE 463
Query: 402 FLVSKGSES-PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVN 442
F V+ + R + + F WP+ G P ++F+ +V+
Sbjct: 464 FKVTDARDGQSRTVRQFQFTDWPEQGAPKSGEGFIDFIGQVH 505
>pdb|1PTU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Hexa-Peptide
(Dadepyl-Nh2)
pdb|1PTT|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Tetra-Peptide
(Ac-Depyl-Nh2)
Length = 321
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + T Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1PTV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine
Length = 321
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + T Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + T Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 121/227 (53%), Gaps = 16/227 (7%)
Query: 225 LKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRN 284
L P + I V + EL N + GF E+FE +Q+ + T +N++
Sbjct: 2 LPIPDDXEAIPVKQFVKHIGELYSNN--QHGFSEDFEEVQRCTADXNITAEHSNHPENKH 59
Query: 285 KNRYKNILPFDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFW 343
KNRY NIL +DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW
Sbjct: 60 KNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFW 119
Query: 344 SMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFL 403
+W++N +IV T +E+G+ KC +YWP ++ S+ YG + V + Y +R F
Sbjct: 120 RXIWEQNTGIIVXITNLVEKGRRKCDQYWPTEN-SEEYGNIIVTLKSTKIHACYTVRRFS 178
Query: 404 V------------SKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
+ KG ++ R + YH+ WPD GVP VL F+
Sbjct: 179 IRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDXGVPEYALPVLTFV 225
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 114/198 (57%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY N+ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYVNVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + T Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + T Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 114/198 (57%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY N+ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYVNVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + T Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 115/197 (58%), Gaps = 8/197 (4%)
Query: 247 QKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDE 306
+++ S GF EE+E L+ + + +NR KNRY N+LP+D +RVKL
Sbjct: 37 KQQADSNCGFAEEYEDLKLVGISQ--PKYAAELAENRGKNRYNNVLPYDISRVKLSVQTH 94
Query: 307 DVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKN 366
+YINANY+ K +IATQG LP+T+ DFW MVW++NV I+M TK +E+G+
Sbjct: 95 ST--DDYINANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRT 152
Query: 367 KCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--KGSESPRKIYHYHFQAWPD 424
KC +YWP Q++ YG + V E V ++ +R+F V + SES + +HF + PD
Sbjct: 153 KCEEYWP-SKQAQDYGDITVAMTSEIVLPEWTIRDFTVKNIQTSES-HPLRQFHFTSAPD 210
Query: 425 HGVPSDPGCVLNFLYEV 441
HGVP ++NF Y V
Sbjct: 211 HGVPDTTDLLINFRYLV 227
>pdb|3ZV2|A Chain A, Human Protein-Tyrosine Phosphatase 1b C215a, S216a Mutant
Length = 320
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1OEO|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To Sulfonic
Acid
pdb|1OET|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEU|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEV|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
Length = 321
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|3EU0|A Chain A, Crystal Structure Of The S-Nitrosylated Cys215 Of Ptp1b
Length = 327
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 14 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 71
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 72 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 126
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 127 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 186
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 187 DFGVPESPASFLNFLFKV 204
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 42 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 99
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 100 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 154
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 155 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 214
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 215 DFGVPESPASFLNFLFKV 232
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 113/200 (56%), Gaps = 9/200 (4%)
Query: 256 FWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYIN 315
F EEF +L + T K +N+ KNRY NILP+DH+RV L V E VP ++YIN
Sbjct: 31 FREEFNALPACPIQA--TCEAASKEENKEKNRYVNILPYDHSRVHLTPV-EGVPDSDYIN 87
Query: 316 ANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD 375
A++I +IA QG T+NDFW M+W++N IVM T ER + KCA+YWP D
Sbjct: 88 ASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQYWP-D 146
Query: 376 HQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPRK----IYHYHFQAWPDHGVPSD 430
TYG V V+ +V DY +R+F + + G + RK I +HF +WPD GVP
Sbjct: 147 QGCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFGVPFT 206
Query: 431 PGCVLNFLYEVNTRQDIHAG 450
P +L FL +V +AG
Sbjct: 207 PIGMLKFLKKVKACNPQYAG 226
>pdb|1EEN|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-D-A-D-Bpa-Ptyr-L-I-P-Q-Q-G
pdb|1EEO|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-E-L-E-F-Ptyr-M-D-Y-E-Nh2
pdb|1PTY|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Phosphotyrosine Molecules
Length = 321
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1AAX|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Bis(Para-Phosphophenyl)methane (Bppm)
Molecules
Length = 321
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 14 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 71
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 72 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 126
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 127 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 186
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 187 DFGVPESPASFLNFLFKV 204
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1G1F|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Tri-Phosphorylated Peptide (Rdi(Ptr)
Etd(Ptr)(Ptr)rk) From The Insulin Receptor Kinase
pdb|1G1G|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Mono-Phosphorylated Peptide (Etdy(Ptr)
Rkggkgll) From The Insulin Receptor Kinase
pdb|1G1H|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Bis-Phosphorylated Peptide
(Etd(Ptr)(Ptr) Rkggkgll) From The Insulin Receptor
Kinase
pdb|2B4S|A Chain A, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|C Chain C, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
Length = 298
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 14 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 71
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 72 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 126
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 127 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 186
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 187 DFGVPESPASFLNFLFKV 204
>pdb|1A5Y|A Chain A, Protein Tyrosine Phosphatase 1b Cysteinyl-Phosphate
Intermediate
Length = 330
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 10 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 67
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 68 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 122
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 123 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 182
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 183 DFGVPESPASFLNFLFKV 200
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 7 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 64
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 65 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 119
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 120 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 179
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 180 DFGVPESPASFLNFLFKV 197
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY ++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPSRVAKLPKNKNRNRYCDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T+ FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 253 KAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGA 311
K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 19 KSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND---- 72
Query: 312 EYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKY 371
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G KCA+Y
Sbjct: 73 -YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQY 131
Query: 372 WPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGV 427
WP + + + + + E + + Y +R+ L + ++ R+I H+H+ WPD GV
Sbjct: 132 WPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 191
Query: 428 PSDPGCVLNFLYEV 441
P P LNFL++V
Sbjct: 192 PESPASFLNFLFKV 205
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 253 KAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGA 311
K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 24 KSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND---- 77
Query: 312 EYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKY 371
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G KCA+Y
Sbjct: 78 -YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQY 136
Query: 372 WPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGV 427
WP + + + + + E + + Y +R+ L + ++ R+I H+H+ WPD GV
Sbjct: 137 WPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 428 PSDPGCVLNFLYEV 441
P P LNFL++V
Sbjct: 197 PESPASFLNFLFKV 210
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 253 KAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGA 311
K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 16 KSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND---- 69
Query: 312 EYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKY 371
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G KCA+Y
Sbjct: 70 -YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQY 128
Query: 372 WPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGV 427
WP + + + + + E + + Y +R+ L + ++ R+I H+H+ WPD GV
Sbjct: 129 WPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 188
Query: 428 PSDPGCVLNFLYEV 441
P P LNFL++V
Sbjct: 189 PESPASFLNFLFKV 202
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 120/218 (55%), Gaps = 8/218 (3%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I ++++ + L+ +S K +E+ES+ + FT N+ KNRY N++
Sbjct: 12 IPIADMAEHTERLKANDSLKLS--QEYESIDPGQQ---FTWEHSNLEVNKPKNRYANVIA 66
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+DH+RV L+ + E + G++YINANY+ +YIATQG LP T DFW MVW++
Sbjct: 67 YDHSRVILQPI-EGIMGSDYINANYVDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSAT 125
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPR 412
IVM T+ E+ + KC +YWP + ++TYG + V + + +R F + K GS R
Sbjct: 126 IVMMTRLEEKSRIKCDQYWP-NRGTETYGFIQVTLLDTIELATFCVRTFSLHKNGSSEKR 184
Query: 413 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
++ + F AWPDHGVP P L FL V T AG
Sbjct: 185 EVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPDAG 222
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Query: 282 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMND 341
N+ KNR NI+P++ TRV L+ + V G++YINA++I K+YIATQG L T D
Sbjct: 344 NKFKNRLVNIMPYESTRVCLQPI-RGVEGSDYINASFIDGYRQQKAYIATQGPLAETTED 402
Query: 342 FWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILRE 401
FW M+W+ N ++VM TK E G+ KC +YWP + ++ Y V+ M E YILRE
Sbjct: 403 FWRMLWENNSTIVVMLTKLREMGREKCHQYWPAERSAR-YQYFVVDPMAEYNMPQYILRE 461
Query: 402 FLVSKGSES-PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVN 442
F V+ + R + + F WP+ GVP ++F+ +V+
Sbjct: 462 FKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVH 503
>pdb|1I57|A Chain A, Crystal Structure Of Apo Human Ptp1b (C215s) Mutant
Length = 310
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 253 KAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGA 311
K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 24 KSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND---- 77
Query: 312 EYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKY 371
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G KCA+Y
Sbjct: 78 -YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQY 136
Query: 372 WPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGV 427
WP + + + + + E + + Y +R+ L + ++ R+I H+H+ WPD GV
Sbjct: 137 WPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 428 PSDPGCVLNFLYEV 441
P P LNFL++V
Sbjct: 197 PESPASFLNFLFKV 210
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 253 KAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGA 311
K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 24 KSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND---- 77
Query: 312 EYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKY 371
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G KCA+Y
Sbjct: 78 -YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSVKCAQY 136
Query: 372 WPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGV 427
WP + + + + + E + + Y +R+ L + ++ R+I H+H+ WPD GV
Sbjct: 137 WPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 428 PSDPGCVLNFLYEV 441
P P LNFL++V
Sbjct: 197 PESPASFLNFLFKV 210
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 253 KAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGA 311
K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 24 KSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND---- 77
Query: 312 EYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKY 371
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G KCA+Y
Sbjct: 78 -YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQY 136
Query: 372 WPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGV 427
WP + + + + + E + + Y +R+ L + ++ R+I H+H+ WPD GV
Sbjct: 137 WPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 428 PSDPGCVLNFLYEV 441
P P LNFL++V
Sbjct: 197 PESPASFLNFLFKV 210
>pdb|1PA1|A Chain A, Crystal Structure Of The C215d Mutant Of Protein Tyrosine
Phosphatase 1b
Length = 310
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 12/194 (6%)
Query: 253 KAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGA 311
K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 24 KSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND---- 77
Query: 312 EYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKY 371
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G KCA+Y
Sbjct: 78 -YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQY 136
Query: 372 WPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGV 427
WP + + + + + E + + Y +R+ L + ++ R+I H+H+ WPD GV
Sbjct: 137 WPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 428 PSDPGCVLNFLYEV 441
P P LNFL++V
Sbjct: 197 PESPASFLNFLFKV 210
>pdb|1YGR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGU|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
pdb|1YGU|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
Length = 610
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 122/221 (55%), Gaps = 9/221 (4%)
Query: 236 VSNIH-DRVTELQKENSSKAG--FWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNIL 292
V IH D + E K + G F EF+S+ + S+ F +E +K N+NKNRY +IL
Sbjct: 7 VEPIHADILLETYKRKIADEGRPFLAEFQSIPRVFSK--FPIKEARKPFNQNKNRYVDIL 64
Query: 293 PFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVR 352
P+D+ RV+L +++ D G+ YINA+YI + YIA QG T++DFW +W++
Sbjct: 65 PYDYNRVELSEINGDA-GSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRXIWEQKAT 123
Query: 353 VIVMTTKEMERGKNKCAKYWPDDHQ-SKTYGAVCVNNMYESVTTDYILREFLVSKGSESP 411
VIV T+ E +NKCA+YWP + ++ +G V V DYI+++ + E
Sbjct: 124 VIVXVTRCEEGNRNKCAEYWPSXEEGTRAFGDVVVKINQHKRCPDYIIQKLNIVNKKEKA 183
Query: 412 --RKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
R++ H F +WPDHGVP DP +L VN + +G
Sbjct: 184 TGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFSG 224
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 25/231 (10%)
Query: 229 FNATRITVSNIHDRVTELQKEN--SSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKN 286
F T + +S +H + +K + S + EF+ L R T+ G + +N++KN
Sbjct: 292 FGETEVNLSELHPYLHNXKKRDPPSEPSPLEAEFQRLPS--YRSWRTQHIGNQEENKSKN 349
Query: 287 RYKNILPFDHTRVKLKDVDE------------------DVPGAEYINANYIQSEDGGKSY 328
R N++P+D+ RV LK E ++YINA++I S +
Sbjct: 350 RNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDSEEPSKYINASFIXSYWKPEVX 409
Query: 329 IATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNN 388
IA QG L T+ DFW ++Q V+VIV T+ + CA+YW + Q TYG + V+
Sbjct: 410 IAAQGPLKETIGDFWQXIFQRKVKVIVXLTELKHGDQEICAQYWGEGKQ--TYGDIEVDL 467
Query: 389 MYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
++ Y LR F L + R +Y Y + W +P++P +++ +
Sbjct: 468 KDTDKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQLPAEPKELISXI 518
>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
Length = 312
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 95/148 (64%), Gaps = 2/148 (1%)
Query: 282 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMND 341
NR KNRY NILP+D +RV+L ++E+ G++YINANYI + + YIATQG LP T ND
Sbjct: 58 NRCKNRYTNILPYDFSRVRLVSMNEE-EGSDYINANYIPGYNSPQEYIATQGPLPETRND 116
Query: 342 FWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILRE 401
FW MV Q+ ++IVM T+ E+ + KC YWP YG + V + E TD++ R
Sbjct: 117 FWKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEDPIAYGDITVEMLSEEEHTDWVYRN 176
Query: 402 FLVSKGSESPRKIYHYHFQAWPDHGVPS 429
F +S E + + H+++ AWPDHGVP+
Sbjct: 177 FRISYADEV-QDVMHFNYTAWPDHGVPT 203
>pdb|1L8K|A Chain A, T Cell Protein-Tyrosine Phosphatase Structure
Length = 314
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 8/182 (4%)
Query: 263 LQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSE 322
L+ + H + R + +NRN+NRY+++ P+DH+RVKL++ + D YINA+ + E
Sbjct: 23 LEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAEND-----YINASLVDIE 77
Query: 323 DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTY- 381
+ +SYI TQG LP+T FW MVWQ+ + +VM + +E+ KCA+YWP D Q +
Sbjct: 78 EAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFK 137
Query: 382 -GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLY 439
V + E V + Y + L + S R I H+H+ WPD GVP P LNFL+
Sbjct: 138 ETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLF 197
Query: 440 EV 441
+V
Sbjct: 198 KV 199
>pdb|2OC3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Protein
Tyrosine Phosphatase Non-Receptor Type 18
Length = 303
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 3/170 (1%)
Query: 277 GQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLP 336
G + +N KNRYK++LP+D TRV L + E+ ++YIN N+I+ DG +YIATQG LP
Sbjct: 55 GSRPENVRKNRYKDVLPYDQTRVILSLLQEE-GHSDYINGNFIRGVDGSLAYIATQGPLP 113
Query: 337 STMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYES-VTT 395
T+ DFW +VW+ V+VI+M +E+E G+ +C +YW + + G C+ + E +
Sbjct: 114 HTLLDFWRLVWEFGVKVILMACREIENGRKRCERYWAQEQEPLQTGLFCITLIKEKWLNE 173
Query: 396 DYILREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQ 445
D +LR V+ ES R +Y + +WPD GVPS P +L + E Q
Sbjct: 174 DIMLRTLKVTFQKES-RSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQ 222
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 8 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 66 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 120
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
CA+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ +P
Sbjct: 121 CAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTFP 180
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 181 DFGVPESPASFLNFLFKV 198
>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
Length = 297
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 282 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMND 341
NR KNRY NILP+D +RV+L ++E+ GA+YINANYI + + YIATQG LP T ND
Sbjct: 51 NRCKNRYTNILPYDFSRVRLVSMNEE-EGADYINANYIPGYNSPQEYIATQGPLPETRND 109
Query: 342 FWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILRE 401
FW MV Q+ ++IVM T+ E+ + KC YWP + YG + V + E D+ R
Sbjct: 110 FWKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEEEQDDWACRH 169
Query: 402 FLVSKGSESPRKIYHYHFQAWPDHGVPSDPGC--VLNFLYEV 441
F ++ E + + H+++ AWPDHGVP+ +L F++ V
Sbjct: 170 FRINYADEM-QDVMHFNYTAWPDHGVPTANAAESILQFVHMV 210
>pdb|2GJT|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptpro
pdb|2GJT|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptpro
Length = 295
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 100/162 (61%), Gaps = 4/162 (2%)
Query: 282 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMND 341
NR KNRY NILP+D +RV+L ++E+ GA+YINANYI + + YIATQG LP T ND
Sbjct: 49 NRCKNRYTNILPYDFSRVRLVSMNEE-EGADYINANYIPGYNSPQEYIATQGPLPETRND 107
Query: 342 FWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILRE 401
FW MV Q+ ++IVM T+ E+ + KC YWP + YG + V + E D+ R
Sbjct: 108 FWKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEEEQDDWACRH 167
Query: 402 FLVSKGSESPRKIYHYHFQAWPDHGVPSDPGC--VLNFLYEV 441
F ++ E + + H+++ AWPDHGVP+ +L F++ V
Sbjct: 168 FRINYADEM-QDVMHFNYTAWPDHGVPTANAAESILQFVHMV 208
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 114/198 (57%), Gaps = 12/198 (6%)
Query: 249 ENSSKAGFWEE-FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 307
E K+G W ++ ++ + S F R + N+N+NRY+++ PFDH+R+KL D D
Sbjct: 14 EQIDKSGSWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 71
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM + ME+G K
Sbjct: 72 -----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLK 126
Query: 368 CAKYWPDDHQSKTY---GAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWP 423
A+YWP + + + + + E + + Y +R+ L + ++ R+I H+H+ WP
Sbjct: 127 WAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWP 186
Query: 424 DHGVPSDPGCVLNFLYEV 441
D GVP P LNFL++V
Sbjct: 187 DFGVPESPASFLNFLFKV 204
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 17/187 (9%)
Query: 270 HLFTRREGQKLD------NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSED 323
L+ ++ G + N +KNRY++I P+D TRV LK +ED YINANYI E
Sbjct: 53 QLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILKG-NED-----YINANYINMEI 106
Query: 324 GGKS----YIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSK 379
S YIA QG LP T DFW M W++ ++VM T ++ERG+ KC +YWP+ S
Sbjct: 107 PSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSS 166
Query: 380 TYGAVCVNNMYESVTTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
+YG V E T YI R+ L ++ R + + AWPDHGVP D L+F+
Sbjct: 167 SYGCYQVTCHSEEGNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFV 226
Query: 439 YEVNTRQ 445
V ++
Sbjct: 227 CHVRNKR 233
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Query: 282 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMND 341
N +KNRYK++LP+D TRV L+ +ED A Y+N I + + YIATQG LP T
Sbjct: 44 NLDKNRYKDVLPYDTTRVLLQG-NEDYINASYVNME-IPAANLVNKYIATQGPLPHTCAQ 101
Query: 342 FWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILRE 401
FW +VW + + +IVM T ERG+ KC +YWPD +G + E T Y+ RE
Sbjct: 102 FWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSRE 161
Query: 402 FLVSK---GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
LV+ G E + H + AWPDHGVP D L F+
Sbjct: 162 MLVTNTQTGEE--HTVTHLQYVAWPDHGVPDDSSDFLEFV 199
>pdb|3D42|A Chain A, Crystal Structure Of Heptp In Complex With A
Monophosphorylated Erk2 Peptide
pdb|3D44|A Chain A, Crystal Structure Of Heptp In Complex With A Dually
Phosphorylated Erk2 Peptide Mimetic
Length = 308
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
+K+RYK+ILP +RV L G +YINANYI+ DG K YIATQG +P+T++DF
Sbjct: 69 SKDRYKDILPNPQSRVCLGRAQSQEDG-DYINANYIRGYDGKEKVYIATQGPMPNTVSDF 127
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA--VCVNNMYESVTTDYILR 400
W MVWQE V +IVM T ++ GK KC YWP + + TYG + + +M E +Y +R
Sbjct: 128 WEMVWQEEVSLIVMLT-QLREGKEKCVHYWPTEEE--TYGPFQIRIQDMKEC--PEYTVR 182
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
+ + E R + H F AWPDH P G +L + EV + A
Sbjct: 183 QLTIQYQEER-RSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAA 230
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 103/189 (54%), Gaps = 19/189 (10%)
Query: 258 EEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINAN 317
+E E+LQ E + L GQ +NR KNRYKNILP+D TRV L D YINA+
Sbjct: 53 KELENLQ--ELKPLDQCLIGQTKENRRKNRYKNILPYDATRVPLGD------EGGYINAS 104
Query: 318 YIQSEDGGKS--YIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD 375
+I+ G + YIA QG LP+T+ DFW M+W++ VI M T+E+E K KC +YWP+
Sbjct: 105 FIKIPVGKEEFVYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNI 164
Query: 376 HQSKTYGAVCVNNMYESVTTDYILREFLVSK------GSESPRKIYHYHFQAWPDHGVPS 429
T + N + ++ L+ F+V + R I H +F AWPDH PS
Sbjct: 165 LGKTTMVS---NRLRLALVRMQQLKGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPS 221
Query: 430 DPGCVLNFL 438
P +L F+
Sbjct: 222 QPDDLLTFI 230
>pdb|2HVL|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant
pdb|2QDP|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant Crystallized In Ammonium Acetate
Length = 309
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
+K+RYK ILP +RV L G +YINANYI+ DG K YIATQG +P+T++DF
Sbjct: 70 SKDRYKTILPNPQSRVCLGRAQSQEDG-DYINANYIRGYDGKEKVYIATQGPMPNTVSDF 128
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA--VCVNNMYESVTTDYILR 400
W MVWQE V +IVM T ++ GK KC YWP + + TYG + + +M E +Y +R
Sbjct: 129 WEMVWQEEVSLIVMLT-QLREGKEKCVHYWPTEEE--TYGPFQIRIQDMKEC--PEYTVR 183
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
+ + E R + H F AWPDH P G +L + EV + A
Sbjct: 184 QLTIQYQEER-RSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAA 231
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
+K+RYK ILP +RV L G +YINANYI+ DG K YIATQG +P+T++DF
Sbjct: 70 SKDRYKTILPNPQSRVCLGRAQSQEDG-DYINANYIRGYDGKEKVYIATQGPMPNTVSDF 128
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA--VCVNNMYESVTTDYILR 400
W MVWQE V +IVM T ++ GK KC YWP + + TYG + + +M E +Y +R
Sbjct: 129 WEMVWQEEVSLIVMLT-QLREGKEKCVHYWPTEEE--TYGPFQIRIQDMKEC--PEYTVR 183
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
+ + E R + H F AWPDH P G +L + EV + A
Sbjct: 184 QLTIQYQEER-RSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAA 231
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
+K+RYK ILP +RV L G +YINANYI+ DG K YIATQG +P+T++DF
Sbjct: 59 SKDRYKTILPNPQSRVCLGRAQSQEDG-DYINANYIRGYDGKEKVYIATQGPMPNTVSDF 117
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA--VCVNNMYESVTTDYILR 400
W MVWQE V +IVM T ++ GK KC YWP + + TYG + + +M E +Y +R
Sbjct: 118 WEMVWQEEVSLIVMLT-QLREGKEKCVHYWPTEEE--TYGPFQIRIQDMKEC--PEYTVR 172
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
+ + E R + H F AWPDH P G +L + EV + A
Sbjct: 173 QLTIQYQEER-RSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAA 220
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
+K+RYK ILP +RV L G +YINANYI+ DG K YIATQG +P+T++DF
Sbjct: 69 SKDRYKTILPNPQSRVCLGRAQSQEDG-DYINANYIRGYDGKEKVYIATQGPMPNTVSDF 127
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA--VCVNNMYESVTTDYILR 400
W MVWQE V +IVM T ++ GK KC YWP + + TYG + + +M E +Y +R
Sbjct: 128 WEMVWQEEVSLIVMLT-QLREGKEKCVHYWPTEEE--TYGPFQIRIQDMKEC--PEYTVR 182
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
+ + E R + H F AWPDH P G +L + EV + A
Sbjct: 183 QLTIQYQEER-RSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAA 230
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
+K+RYK ILP +RV L G +YINANYI+ DG K YIATQG +P+T++DF
Sbjct: 70 SKDRYKTILPNPQSRVCLGRAQSQEDG-DYINANYIRGYDGKEKVYIATQGPMPNTVSDF 128
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA--VCVNNMYESVTTDYILR 400
W MVWQE V +IVM T ++ GK KC YWP + + TYG + + +M E +Y +R
Sbjct: 129 WEMVWQEEVSLIVMLT-QLREGKEKCVHYWPTEEE--TYGPFQIRIQDMKEC--PEYTVR 183
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
+ + E R + H F AWPDH P G +L + EV + A
Sbjct: 184 QLTIQYQEER-RDVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAA 231
>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
Length = 314
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 13/231 (5%)
Query: 223 VHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDN 282
VH+ P +T+ + D V QK+ G +EE+E ++++ F N
Sbjct: 3 VHVPGPHA---MTIQELVDYVNARQKQ-----GIYEEYEDIRRENPVGTF--HCSMSPGN 52
Query: 283 RNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDF 342
KNRY ++ D TRVKL +YINA+++ +YI TQG L +T DF
Sbjct: 53 LEKNRYGDVPCLDQTRVKLTKRSGHTQ-TDYINASFMDGYKQKNAYIGTQGPLENTYRDF 111
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKT-YGAVCVNNMYESVTTDYILRE 401
W MVW++ V VIVMTT+ E G+ KC +YWP + S+ +G + V N+ Y
Sbjct: 112 WLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTT 171
Query: 402 FLVSKGSE-SPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAGN 451
+ E R++ H+ F +WPD+GVPS +++FL V +Q + N
Sbjct: 172 LEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSN 222
>pdb|2CJZ|A Chain A, Crystal Structure Of The C472s Mutant Of Human Protein
Tyrosine Phosphatase Ptpn5 (Step, Striatum Enriched
Phosphatase) In Complex With Phosphotyrosine
Length = 305
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 285 KNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDFW 343
KNRYK ILP H+RV L D D P + YINANYI+ G K YIATQG + ST+ DFW
Sbjct: 67 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 126
Query: 344 SMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFL 403
MVWQE+ +IVM T +E KC +YWP++ + Y V + T DY LR
Sbjct: 127 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQVA--YDGVEITVQKVIHTEDYRLRLIS 183
Query: 404 VSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
+ G+E R + HY F +WPD P +L+ + EV
Sbjct: 184 LKSGTEE-RGLKHYWFTSWPDQKTPDRAPPLLHLVREV 220
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 285 KNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDFW 343
KNRYK ILP H+RV L D D P + YINANYI+ G K YIATQG + ST+ DFW
Sbjct: 67 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 126
Query: 344 SMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFL 403
MVWQE+ +IVM T +E KC +YWP++ + Y V + T DY LR
Sbjct: 127 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQVA--YDGVEITVQKVIHTEDYRLRLIS 183
Query: 404 VSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
+ G+E R + HY F +WPD P +L+ + EV
Sbjct: 184 LKSGTEE-RGLKHYWFTSWPDQKTPDRAPPLLHLVREV 220
>pdb|2BV5|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 At 1.8a Resolution
Length = 282
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 90/158 (56%), Gaps = 5/158 (3%)
Query: 285 KNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDFW 343
KNRYK ILP H+RV L D D P + YINANYI+ G K YIATQG + ST+ DFW
Sbjct: 46 KNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFW 105
Query: 344 SMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFL 403
MVWQE+ +IVM T +E KC +YWP++ + Y V + T DY LR
Sbjct: 106 RMVWQEHTPIIVMITN-IEEMNEKCTEYWPEEQVA--YDGVEITVQKVIHTEDYRLRLIS 162
Query: 404 VSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
+ G+E R + HY F +WPD P +L+ + EV
Sbjct: 163 LKSGTEE-RGLKHYWFTSWPDQKTPDRAPPLLHLVREV 199
>pdb|2QDM|A Chain A, Crystal Structure Of The Heptp Catalytic Domain
C270sD236AQ314A Mutant
Length = 309
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
+K+RYK ILP +RV L G +YINANYI+ DG K YIATQG +P+T++DF
Sbjct: 70 SKDRYKTILPNPQSRVCLGRAQSQEDG-DYINANYIRGYDGKEKVYIATQGPMPNTVSDF 128
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA--VCVNNMYESVTTDYILR 400
W MVWQE V +IVM T ++ GK KC YWP + + TYG + + +M E +Y +R
Sbjct: 129 WEMVWQEEVSLIVMLT-QLREGKEKCVHYWPTEEE--TYGPFQIRIQDMKEC--PEYTVR 183
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
+ + E R + H F AWP H P G +L + EV + A
Sbjct: 184 QLTIQYQEER-RSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPETAA 231
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
+K+RYK ILP +RV L G +YINANYI+ DG K YIATQG +P+T++DF
Sbjct: 70 SKDRYKTILPNPQSRVCLGRAQSQEDG-DYINANYIRGYDGKEKVYIATQGPMPNTVSDF 128
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGA--VCVNNMYESVTTDYILR 400
W MVWQE V +IVM T ++ GK KC YWP + + TYG + + +M E +Y +R
Sbjct: 129 WEMVWQEEVSLIVMLT-QLREGKEKCVHYWPTEEE--TYGPFQIRIQDMKEC--PEYTVR 183
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
+ + E R + H F AWP H P G +L + EV + A
Sbjct: 184 QLTIQYQEER-RSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPETAA 231
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 223 VHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDN 282
++ + +ATR+ + +R L+K+ F E+E + ++++ +F+ +N
Sbjct: 18 LYFQSMVDATRVPMD---ERFRTLKKKLEEGMVF-TEYEQIPKKKANGIFS--TAALPEN 71
Query: 283 RNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKS--YIATQGCLPSTMN 340
++R + ++P++ RV+L E+ G YINA++I+ GG YIATQG LP T +
Sbjct: 72 AERSRIREVVPYEENRVELIPTKENNTG--YINASHIKVVVGGAEWHYIATQGPLPHTCH 129
Query: 341 DFWSMVWQENVRVIVMTTKEMERGKNKCAKYWP---DDHQSKTYGAVCVNNMYES----- 392
DFW MVW++ V VI M T E E G+ K +YWP H S TYG V + +
Sbjct: 130 DFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYWPKLGSKHSSATYGKFKVTTKFRTDSVCY 189
Query: 393 VTTDYILREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNT 443
TT ++ L S R ++H + WPDHG P D L++L E+ +
Sbjct: 190 ATTGLKVKHLL----SGQERTVWHLQYTDWPDHGCPEDVQGFLSYLEEIQS 236
>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
Length = 253
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
Query: 275 REGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGC 334
R G N KNR I+P++ RV + V +Y+NA++I SYIA+QG
Sbjct: 2 RTGNLPANMKKNRVLQIIPYEFNRVIIP-VKRGEENTDYVNASFIDGYRQKDSYIASQGP 60
Query: 335 LPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVT 394
L T+ DFW M+W+ IVM T+ ERG+ KCA+YWP D +YG + V E
Sbjct: 61 LLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPSDGLV-SYGDITVELKKEEEC 119
Query: 395 TDYILREFLVSKGSES-PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAGN 451
Y +R+ LV+ E+ R+I +HF WP+ G+PSD ++N + V +Q +GN
Sbjct: 120 ESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQ-QSGN 176
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 104/189 (55%), Gaps = 9/189 (4%)
Query: 257 WEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINA 316
W+ + Q + + + EG N KNR+ + LP+DH R+KLK V+ ++YINA
Sbjct: 35 WQALCAYQAEPNTCATAQGEG----NIKKNRHPDFLPYDHARIKLK-VESSPSRSDYINA 89
Query: 317 NYIQSEDG-GKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD 375
+ I D +YIATQG L T+ DFW MVW+ VIVM T +E G +C +YWPD+
Sbjct: 90 SPIIEHDPRMPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVEDGVKQCDRYWPDE 149
Query: 376 HQSKTYGAVCVNNMYESV-TTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGVPSDPGC 433
S Y VN + E + D+++R F L + ++ R + +HF +WP G P+
Sbjct: 150 GAS-LYHVYEVNLVSEHIWCEDFLVRSFYLKNVQTQETRTLTQFHFLSWPAEGTPASTRP 208
Query: 434 VLNFLYEVN 442
+L+F +VN
Sbjct: 209 LLDFRRKVN 217
>pdb|2QEP|A Chain A, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
pdb|2QEP|B Chain B, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
Length = 304
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 257 WEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINA 316
WE + Q + + +RE +N KNR +L +DH+RV LK + ++YINA
Sbjct: 36 WEALCAYQAEPNSSFVAQRE----ENVPKNRSLAVLTYDHSRVLLK-AENSHSHSDYINA 90
Query: 317 NYIQSEDG-GKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD 375
+ I D +YIATQG LP+T+ DFW MVW+ VIVM T E G +C YWPD+
Sbjct: 91 SPIMDHDPRNPAYIATQGPLPATVADFWQMVWESGCVVIVMLTPLAENGVRQCYHYWPDE 150
Query: 376 HQSKTYGAVCVNNMYESV-TTDYILREF-LVSKGSESPRKIYHYHFQAWPDHGVPSDPGC 433
S Y VN + E + D+++R F L + + R + +HF +W D GVPS
Sbjct: 151 -GSNLYHIYEVNLVSEHIWCEDFLVRSFYLKNLQTNETRTVTQFHFLSWYDRGVPSSSRS 209
Query: 434 VLNFLYEVN 442
+L+F +VN
Sbjct: 210 LLDFRRKVN 218
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 93/159 (58%), Gaps = 5/159 (3%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
KNRYK ILP +RV L+ + + YINANYI+ G K++IATQG + +T+NDF
Sbjct: 58 TKNRYKTILPNPLSRVCLRPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDF 117
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREF 402
W MVWQE+ VIVM TK E+ + KC YWP+ + YG V V + +Y +R
Sbjct: 118 WQMVWQEDSPVIVMITKLKEKNE-KCVLYWPE--KRGIYGKVEVLVTGVTECDNYTIRNL 174
Query: 403 LVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
++ +GS + + + HY + +WPDH P +L + +V
Sbjct: 175 VLKQGSHT-QHVKHYWYTSWPDHKTPDSAQPLLQLMLDV 212
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
Query: 284 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDF 342
KNRYK ILP +RV L+ + + YINANYI+ G K++IATQG + +T++DF
Sbjct: 45 TKNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIRGYSGKEKAFIATQGPMINTVDDF 104
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREF 402
W MVWQE+ VIVM TK E+ + KC YWP+ + YG V V + + +Y +R
Sbjct: 105 WQMVWQEDSPVIVMITKLKEKNE-KCVLYWPE--KRGIYGKVEVLVISVNECDNYTIRNL 161
Query: 403 LVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
++ +GS + + + HY + +WPDH P +L + +V
Sbjct: 162 VLKQGSHT-QHVKHYWYTSWPDHKTPDSAQPLLQLMLDV 199
>pdb|1X6C|A Chain A, Solution Structures Of The Sh2 Domain Of Human Protein-
Tyrosine Phosphatase Shp-1
pdb|2YU7|A Chain A, Solution Structure Of The Shp-1 C-Terminal Sh2 Domain
Complexed With A Tyrosine-Phosphorylated Peptide From
Nkg2a
pdb|2RMX|A Chain A, Solution Structure Of The Shp-1 C-Terminal Sh2 Domain
Complexed With A Tyrosine-Phosphorylated Peptide From
Nkg2a
Length = 118
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 32/127 (25%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W+HG +SG +AE L+ KG+ +F LVRES S+PGDFV
Sbjct: 8 WYHGHMSGGQAETLLQAKGEPWTF-----------------------LVRESLSQPGDFV 44
Query: 172 LSVRTDD---------KVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV 222
LSV +D +VTH+ + C+ +Y VGG E FDSLT L+EH+K+ + E SG
Sbjct: 45 LSVLSDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAF 104
Query: 223 VHLKQPF 229
V+L+QP+
Sbjct: 105 VYLRQPY 111
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNG---------EVTH 53
S W+H +SG +AE LL +G +FLVR S S PGDF LSV + VTH
Sbjct: 5 SSGWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTH 64
Query: 54 IKIQNTGDCYDLYGGEKFATLSELVQFY 81
IK+ G Y + G E F +L++LV+ +
Sbjct: 65 IKVMCEGGRYTVGGLETFDSLTDLVEHF 92
>pdb|3GQI|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 226
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 49/245 (20%)
Query: 2 SSRRWFHPSISGVE-----AEVLLLER-----GYDGSFLVRPSRSNPGDFTLSVRLNGEV 51
SS +WFH + AE LL E DGSFLVR S + GD+TLS NG+V
Sbjct: 2 SSEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKV 61
Query: 52 THIKIQNTGDC----YDLYGGEKFATLSELVQFYMENQGQLKKRNQEV-IELKYPLSCAD 106
H +I + D + L F +L +L+ Y Q+ R E + L P+ +
Sbjct: 62 QHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQ----QVPLRCNEFEMRLSEPVPQTN 117
Query: 107 P-TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQS 165
++ W+H L+ +AE ++++ ++G+FLVR+ ++
Sbjct: 118 AHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRK------------------------RN 153
Query: 166 KPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHL 225
+P + +S R + K+ H ++ + + +G E FDSL LI +Y+++P+ + L
Sbjct: 154 EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEKHPLYRK----MKL 208
Query: 226 KQPFN 230
+ P N
Sbjct: 209 RYPIN 213
>pdb|4FBN|A Chain A, Insights Into Structural Integration Of The Plcgamma
Regulatory Region And Mechanism Of Autoinhibition And
Activation Based On Key Roles Of Sh2 Domains
Length = 246
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 49/245 (20%)
Query: 2 SSRRWFHPSISGVE-----AEVLLLER-----GYDGSFLVRPSRSNPGDFTLSVRLNGEV 51
S+ +WFH + AE LL E DGSFLVR S + GD+TLS NG+V
Sbjct: 2 SNEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKV 61
Query: 52 THIKIQNTGDC----YDLYGGEKFATLSELVQFYMENQGQLKKRNQEV-IELKYPLSCAD 106
H +I + D + L F +L +L+ Y Q+ R E + L P+ +
Sbjct: 62 QHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQ----QVPLRCNEFEMRLSEPVPQTN 117
Query: 107 P-TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQS 165
++ W+H L+ +AE ++++ ++G+FLVR+ ++
Sbjct: 118 AHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRK------------------------RN 153
Query: 166 KPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHL 225
+P + +S R + K+ H ++ + + +G E FDSL LI +Y+++P+ + L
Sbjct: 154 EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEKHPLYRK----MKL 208
Query: 226 KQPFN 230
+ P N
Sbjct: 209 RYPIN 213
>pdb|4EY0|A Chain A, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|B Chain B, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|C Chain C, Structure Of Tandem Sh2 Domains From Plcgamma1
pdb|4EY0|D Chain D, Structure Of Tandem Sh2 Domains From Plcgamma1
Length = 246
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 49/245 (20%)
Query: 2 SSRRWFHPSISGVE-----AEVLLLER-----GYDGSFLVRPSRSNPGDFTLSVRLNGEV 51
S+ +WFH + AE LL E DGSFLVR S + GD+TLS NG+V
Sbjct: 2 SNEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKV 61
Query: 52 THIKIQNTGDC----YDLYGGEKFATLSELVQFYMENQGQLKKRNQEV-IELKYPLSCAD 106
H +I + D + L F +L +L+ Y Q+ R E + L P+ +
Sbjct: 62 QHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQ----QVPLRCNEFEMRLSEPVPQTN 117
Query: 107 P-TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQS 165
++ W+H L+ +AE ++++ ++G+FLVR+ ++
Sbjct: 118 AHESKEWYHASLTRAQAEHMLMRVPRDGAFLVRK------------------------RN 153
Query: 166 KPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHL 225
+P + +S R + K+ H ++ + + +G E FDSL LI +Y+++P+ + L
Sbjct: 154 EPNSYAISFRAEGKIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEKHPLYRK----MKL 208
Query: 226 KQPFN 230
+ P N
Sbjct: 209 RYPIN 213
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 32/200 (16%)
Query: 252 SKAGFWEEFESLQQQESRHLFTRRE-------GQKLDNRNKNRYKNILPFDHTRVKLKDV 304
+K ++E +Q++ S L R+E L NR+KNRY +IL + T L
Sbjct: 10 TKLSVQAQYERVQREFS--LLLRQEDPRSISFATSLKNRHKNRYLDILANEAT---LYPQ 64
Query: 305 DEDVPGAE---YINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEM 361
D PGA YIN N I D ++A Q + + DF +M++++ + +++M TK
Sbjct: 65 VTDAPGASTPYYINGNLIDL-DLPHKFVACQAPVVQGIPDFLAMLYEKKISLVIMVTKLE 123
Query: 362 ERGKNKCAKYWPDDHQSKTYGAVCVNN------------MYESVTTDYILREFLV-SKGS 408
E G K +YWP++ S G++ V+ YE I R +L+ +
Sbjct: 124 EGGFVKADRYWPEERGS---GSIAVSGNCGLTISEDPGKAYEVEDELKITRRYLILQRAD 180
Query: 409 ESPRKIYHYHFQAWPDHGVP 428
E P K + WPDHG+P
Sbjct: 181 EPPHKFTQVQYTGWPDHGIP 200
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 259 EFESLQQQES-RHL-FTRREGQKLDNRNKNRYKNILPFDHTRVK--LKDVDEDVPGAEYI 314
EF LQ+QE+ R++ FT L NR+KNRY +IL + T LK V YI
Sbjct: 24 EFVQLQRQENPRNINFT----TSLKNRHKNRYLDILANEETIYPPVLKAVGAQPGRYPYI 79
Query: 315 NANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPD 374
N N I D +++A Q +P + DF + ++ V ++VM TK E G K +YWP+
Sbjct: 80 NGNLIDL-DLPHTFVACQAPVPQGVPDFLETLSEKKVDLVVMLTKLREGGVLKAERYWPE 138
Query: 375 DHQSKT------YGAVCVNNMYES-----VTTDYILREFLVSKGSESPRKIYHYHFQAWP 423
+ + + A+ V E+ D + R ++ + ++ + WP
Sbjct: 139 EEEDSLSFPESGHDAIKVTRDAEASYEVDAELDIVRRPLVIHVPGKPMHRVLQVQYVGWP 198
Query: 424 DHGVP 428
DHGVP
Sbjct: 199 DHGVP 203
>pdb|2CI8|A Chain A, Sh2 Domain Of Human Nck1 Adaptor Protein - Uncomplexed
Length = 99
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W++ ++ +AE+ L ERG++G FL+R S S+P DF++S++ G+ H K+Q Y +
Sbjct: 3 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 62
Query: 66 YGGEKFATLSELVQFY 81
G KF+T+ ELV+ Y
Sbjct: 63 -GQRKFSTMEELVEHY 77
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSL 203
+AE + ++G G FL+R+S+S P DF +S++ K H ++ + Y + G +F ++
Sbjct: 12 QAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI-GQRKFSTM 70
Query: 204 TQLIEHYKRNPM 215
+L+EHYK+ P+
Sbjct: 71 EELVEHYKKAPI 82
>pdb|1Z3K|A Chain A, Structural Insight Into The Binding Diversity Between
The Tyr-Phosphorylated Human Ephrinbs And Nck2 Sh2
Domain
Length = 98
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 4 RRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCY 63
R W++ +++ +AE L ERG +G FL+R S S+P DF++S++ +G+ H K+Q + Y
Sbjct: 1 REWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVY 60
Query: 64 DLYGGEKFATLSELVQFY 81
+ G +F T+ ELV+ Y
Sbjct: 61 CI-GQRRFHTMDELVEHY 77
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSL 203
+AE + ++G G FL+R+S+S P DF +S++ K H ++ Y + G +F ++
Sbjct: 12 QAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI-GQRRFHTM 70
Query: 204 TQLIEHYKRNPM 215
+L+EHYK+ P+
Sbjct: 71 DELVEHYKKAPI 82
>pdb|2CI9|A Chain A, Nck1 Sh2-Domain In Complex With A Dodecaphosphopeptide
From Epec Protein Tir
pdb|2CI9|B Chain B, Nck1 Sh2-Domain In Complex With A Dodecaphosphopeptide
From Epec Protein Tir
Length = 102
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W++ ++ +AE+ L ERG++G FL+R S S+P DF++S++ G+ H K+Q Y +
Sbjct: 7 WYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI 66
Query: 66 YGGEKFATLSELVQFY 81
G KF+T+ ELV+ Y
Sbjct: 67 -GQRKFSTMEELVEHY 81
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSL 203
+AE + ++G G FL+R+S+S P DF +S++ K H ++ + Y + G +F ++
Sbjct: 16 QAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCI-GQRKFSTM 74
Query: 204 TQLIEHYKRNPM 215
+L+EHYK+ P+
Sbjct: 75 EELVEHYKKAPI 86
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 6 WFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQN-TGDCY 63
+F +I+ EAE L++ G DG +L+R SR+ G F LSV + H I+ Y
Sbjct: 15 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY 74
Query: 64 DLYGGEKFATLSELVQFY-MENQG---QLKK---RNQEVIELKYPLSCADPTTERWFHGQ 116
+ GG A+ ++L ++ E+ G LKK R Q V P R + Q
Sbjct: 75 AIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIREYVKQ 134
Query: 117 ---LSGKEAEQLIL-QKGKNGSFLVRESQSK-----------EAEQLILQKGK-NGSFLV 160
L G+ EQ I+ QK + + + K E+EQ++L K NG FL+
Sbjct: 135 TWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLI 194
Query: 161 RESQSKPGDFVLSVRTDDKVTHVMI-RCQAEKYDVGGGEQFDSLTQLIEHY 210
R ++ G + L + + KV H I + + K + G++FD+L QL+EHY
Sbjct: 195 R-ARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY 244
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 6 WFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQN-TGDCY 63
+F +I+ EAE L++ G DG +L+R SR+ G F LSV + H I+ Y
Sbjct: 16 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY 75
Query: 64 DLYGGEKFATLSELVQFY-MENQG---QLKK---RNQEVIELKYPLSCADPTTERWFHGQ 116
+ GG A+ ++L ++ E+ G LKK R Q V P R + Q
Sbjct: 76 AIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIREYVKQ 135
Query: 117 ---LSGKEAEQLIL-QKGKNGSFLVRESQSK-----------EAEQLILQKGK-NGSFLV 160
L G+ EQ I+ QK + + + K E+EQ++L K NG FL+
Sbjct: 136 TWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLI 195
Query: 161 RESQSKPGDFVLSVRTDDKVTHVMI-RCQAEKYDVGGGEQFDSLTQLIEHY 210
R ++ G + L + + KV H I + + K + G++FD+L QL+EHY
Sbjct: 196 R-ARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY 245
>pdb|1GRI|A Chain A, Grb2
pdb|1GRI|B Chain B, Grb2
Length = 217
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 55 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 114
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 115 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 147
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 110 ERWFHGQLSGKEA--EQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
+ W+ +L+GK+ + ++ + F + ++K AE+++ ++ +G+FL+RES+S P
Sbjct: 34 QNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAK-AEEMLSKQRHDGAFLIRESESAP 92
Query: 168 GDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDSLTQLIEHYK 211
GDF LSV+ + V H ++R A KY + +F+SL +L+++++
Sbjct: 93 GDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNSLNELVDYHR 136
>pdb|3N84|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|D Chain D, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|E Chain E, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
pdb|3N84|F Chain F, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 23-Membered Macrocyclic Ligand Having The Sequence
Pyvnvp
Length = 112
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 4 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 63
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 64 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 96
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 18 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 76
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 77 LNELVDYHR 85
>pdb|1BM2|A Chain A, Grb2-Sh2 Domain In Complex With
Cyclo-[n-Alpha-Acetyl-L-Thi
Alysyl-O-Phosphotyrosyl-Valyl-Asparagyl-Valyl-Prolyl]
(Pkf273-791)
Length = 117
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 9 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 68
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 69 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 101
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 23 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 81
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 82 LNELVDYHR 90
>pdb|3OVE|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Pyxn- Derived Tripeptide
Length = 117
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 3 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 62
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 63 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 95
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 17 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 75
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 76 LNELVDYHR 84
>pdb|3IMD|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IMD|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Flexible Ac-Py-Q-N-Nh2 Tripeptide Mimic
pdb|3IMJ|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Cyclopropyl-Constrained Ac-Ptyr-Ile-Asn-Nh2
Tripeptide Mimic
pdb|3IMJ|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Cyclopropyl-Constrained Ac-Ptyr-Ile-Asn-Nh2
Tripeptide Mimic
pdb|3IN7|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Cyclopropyl-Constrained Ac-Py-Q-N-Nh2 Tripeptide
Mimic
pdb|3IN7|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Cyclopropyl-Constrained Ac-Py-Q-N-Nh2 Tripeptide
Mimic
pdb|3IN8|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Flexible Ac-Ptyr-Ile-Asn-Nh2 Tripeptide Mimic
pdb|3KFJ|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Flexible Ac-py-e-n-nh2 Tripeptide Mimic
pdb|3N8M|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
An Acyclic Ligand Having The Sequence Pyvnvp
pdb|3OV1|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Pyxn- Derived Tripeptide
pdb|3S8L|A Chain A, Protein-Ligand Interactions: Thermodynamic Effects
Associated With Increasing Hydrophobic Surface Area
pdb|3S8N|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Pyxn- Derived Tripeptide
pdb|3S8O|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A Pyxn- Derived Tripeptide
Length = 117
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 3 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 62
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 63 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 95
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 17 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 75
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 76 LNELVDYHR 84
>pdb|2H46|E Chain E, Native Domain-Swapped Dimer Crystal Structure Of The
Grb2 Sh2 Domain
pdb|2H5K|A Chain A, Crystal Structure Of Complex Between The Domain-Swapped
Dimeric Grb2 Sh2 Domain And Shc-Derived Ligand,
Ac-Nh-Ptyr-Val-Asn-Nh2
pdb|2H5K|B Chain B, Crystal Structure Of Complex Between The Domain-Swapped
Dimeric Grb2 Sh2 Domain And Shc-Derived Ligand,
Ac-Nh-Ptyr-Val-Asn-Nh2
pdb|2HUW|A Chain A, X-Ray Crystal Structure Of The Grb2 Sh2 Domain Complexed
To A Constrained And Cyclopropane-Derived Ligand
pdb|2HUW|B Chain B, X-Ray Crystal Structure Of The Grb2 Sh2 Domain Complexed
To A Constrained And Cyclopropane-Derived Ligand
pdb|3C7I|A Chain A, X-Ray Crystal Structure Of The Complex Between The
Grb2-Sh2 Domain And A Flexible Ligand, Fptvn
Length = 116
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 3 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 62
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 63 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 95
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 17 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 75
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 76 LNELVDYHR 84
>pdb|2CIA|A Chain A, Human Nck2 Sh2-Domain In Complex With A
Decaphosphopeptide From Translocated Intimin Receptor
(Tir) Of Epec
Length = 102
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W++ +++ +AE L ERG +G FL+R S S+P DF++S++ +G+ H K+Q + Y +
Sbjct: 7 WYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI 66
Query: 66 YGGEKFATLSELVQFY 81
G +F T+ ELV+ Y
Sbjct: 67 -GQRRFHTMDELVEHY 81
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSL 203
+AE + ++G G FL+R+S+S P DF +S++ K H ++ Y + G +F ++
Sbjct: 16 QAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI-GQRRFHTM 74
Query: 204 TQLIEHYKRNPM 215
+L+EHYK+ P+
Sbjct: 75 DELVEHYKKAPI 86
>pdb|1FHS|A Chain A, The Three-Dimensional Solution Structure Of The Src
Homology Domain-2 Of The Growth Factor Receptor Bound
Protein-2, Nmr, 18 Structures
Length = 112
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 4 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 63
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 64 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 96
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 18 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 76
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 77 LNELVDYHR 85
>pdb|1BMB|A Chain A, Grb2-Sh2 Domain In Complex With KpfyVnvef (Pkf270-974)
Length = 123
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 10 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 69
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 70 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 102
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 24 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 82
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 83 LNELVDYHR 91
>pdb|2AOA|A Chain A, Crystal Structures Of A High-affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOA|B Chain B, Crystal Structures Of A High-affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|A Chain A, Crystal Structures Of A High-Affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|B Chain B, Crystal Structures Of A High-Affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|C Chain C, Crystal Structures Of A High-Affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
pdb|2AOB|D Chain D, Crystal Structures Of A High-Affinity Macrocyclic
Peptide Mimetic In Complex With The Grb2 Sh2 Domain
Length = 99
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 1 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 60
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 61 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 93
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 15 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 73
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 74 LNELVDYHR 82
>pdb|1FYR|A Chain A, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|B Chain B, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|C Chain C, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
pdb|1FYR|D Chain D, Dimer Formation Through Domain Swapping In The Crystal
Structure Of The Grb2-Sh2 Ac-Pyvnv Complex
Length = 114
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 8 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 67
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 68 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 100
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 22 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 80
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 81 LNELVDYHR 89
>pdb|3MXC|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes
Reveal A Conformational Switch And Their Functional
Implications.
pdb|3MXY|A Chain A, Structures Of Grb2-Sh2 Domain And Aicd Peptide Complexes
Reveal A Conformational Switch And Their Functional
Implications
Length = 101
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 4 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 63
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 64 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 96
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 18 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 76
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 77 LNELVDYHR 85
>pdb|1TZE|E Chain E, Signal Transduction Adaptor Growth Factor, Grb2 Sh2
Domain Complexed With Phosphotyrosyl Heptapeptide
Lys-Pro-Phe-Ptyr-Val-Asn-Val-Nh2 (Kfppyvnc-Nh2)
pdb|3N7Y|A Chain A, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 20-Membered Macrocyclic Ligand Having The Sequence
Pyvnv
pdb|3N7Y|B Chain B, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 20-Membered Macrocyclic Ligand Having The Sequence
Pyvnv
pdb|3N7Y|C Chain C, Crystal Structure Of The Grb2 Sh2 Domain In Complex With
A 20-Membered Macrocyclic Ligand Having The Sequence
Pyvnv
Length = 98
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 1 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 60
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 61 AGKYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 93
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 15 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 73
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 74 LNELVDYHR 82
>pdb|1A81|A Chain A, Crystal Structure Of The Tandem Sh2 Domain Of The Syk
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
pdb|1A81|C Chain C, Crystal Structure Of The Tandem Sh2 Domain Of The Syk
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
pdb|1A81|E Chain E, Crystal Structure Of The Tandem Sh2 Domain Of The Syk
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
pdb|1A81|G Chain G, Crystal Structure Of The Tandem Sh2 Domain Of The Syk
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
pdb|1A81|I Chain I, Crystal Structure Of The Tandem Sh2 Domain Of The Syk
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
pdb|1A81|K Chain K, Crystal Structure Of The Tandem Sh2 Domain Of The Syk
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
Length = 254
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 27/231 (11%)
Query: 6 WFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQN-TGDCY 63
+F +I+ EAE L++ G DG +L+R SR+ G F LSV + H I+ Y
Sbjct: 7 FFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTY 66
Query: 64 DLYGGEKFATLSELVQFY-MENQG---QLKK---RNQEVIELKYPLSCADPTTERWFHGQ 116
+ GG A+ ++L ++ E+ G LKK R Q V P R + Q
Sbjct: 67 AIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIREYVKQ 126
Query: 117 ---LSGKEAEQLIL-QKGKNGSFLVRESQSK-----------EAEQLILQKGK-NGSFLV 160
L G+ EQ I+ QK + + + K E+EQ++L K NG FL+
Sbjct: 127 TWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLI 186
Query: 161 RESQSKPGDFVLSVRTDDKVTHVMI-RCQAEKYDVGGGEQFDSLTQLIEHY 210
R ++ G + L + + KV H I + + K + G++FD+L QL+EHY
Sbjct: 187 R-ARDNNGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY 236
>pdb|1X0N|A Chain A, Nmr Structure Of Growth Factor Receptor Binding Protein
Sh2 Domain Complexed With The Inhibitor
pdb|1QG1|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
Complexed With An Shc-Derived Peptide
Length = 104
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDC 62
S WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 2 SHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAG 61
Query: 63 YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 62 KYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 92
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 14 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 72
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 73 LNELVDYHR 81
>pdb|1JYQ|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A
Highly Affine Phospho Peptide
pdb|1JYQ|B Chain B, Xray Structure Of Grb2 Sh2 Domain Complexed With A
Highly Affine Phospho Peptide
pdb|1JYR|A Chain A, Xray Structure Of Grb2 Sh2 Domain Complexed With A
Phosphorylated Peptide
pdb|1JYU|A Chain A, Xray Structure Of Grb2 Sh2 Domain
Length = 96
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDC 62
S WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 2 SMAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAG 61
Query: 63 YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 62 KYFLWVVKFNSLNELVDYHRSTS---VSRNQQIF 92
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 14 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 72
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 73 LNELVDYHR 81
>pdb|1ZFP|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
Complexed With A Phosphotyrosyl Pentapeptide
Length = 98
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 5 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 64
Query: 66 YGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 65 LWVVKFNSLNELVDYHRSTS---VSRNQQIF 92
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 14 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 72
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 73 LNELVDYHR 81
>pdb|1CJ1|A Chain A, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|B Chain B, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|C Chain C, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|D Chain D, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|E Chain E, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|F Chain F, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|G Chain G, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|H Chain H, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|I Chain I, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|J Chain J, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|K Chain K, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
pdb|1CJ1|L Chain L, Growth Factor Receptor Binding Protein Sh2 Domain
(Human) Complexed With A Phosphotyrosyl Derivative
Length = 96
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 4 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 63
Query: 66 YGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 64 LWVVKFNSLNELVDYHRSTS---VSRNQQIF 91
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 144 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEKYDVGGGEQFDS 202
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A KY + +F+S
Sbjct: 13 KAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFL-WVVKFNS 71
Query: 203 LTQLIEHYK 211
L +L+++++
Sbjct: 72 LNELVDYHR 80
>pdb|2AUG|A Chain A, Crystal Structure Of The Grb14 Sh2 Domain
pdb|2AUG|B Chain B, Crystal Structure Of The Grb14 Sh2 Domain
Length = 126
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 3 SRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD 61
S+ WFH IS EA+ L++++G DG FLVR S+SNP F LS+ ++ H +I D
Sbjct: 25 SQPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVED 84
Query: 62 CYDLY-----GGEKFATLSELVQFYMENQGQL 88
+++ G +F L +LV+FY N+G L
Sbjct: 85 DGEMFHTLDDGHTRFTDLIQLVEFYQLNKGVL 116
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 27/110 (24%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
++ WFH ++S EA++LI+Q+G LV +G FLVR+SQS P
Sbjct: 25 SQPWFHHKISRDEAQRLIIQQG-----LV-----------------DGVFLVRDSQSNPK 62
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDV-----GGGEQFDSLTQLIEHYKRN 213
FVLS+ K+ H I + ++ G +F L QL+E Y+ N
Sbjct: 63 TFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLVEFYQLN 112
>pdb|1GHU|A Chain A, Nmr Solution Structure Of Growth Factor Receptor-Bound
Protein 2 (Grb2) Sh2 Domain, 24 Structures
Length = 107
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 3 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 62
Query: 66 YGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
KF +L+ELV ++ RNQ++
Sbjct: 63 LWVVKFNSLNELVDYHRSTS---VSRNQQIF 90
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 133 GSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV-MIRCQAEK 191
GS+ + +AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H ++R A K
Sbjct: 1 GSWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGK 60
Query: 192 YDVGGGEQFDSLTQLIEHYK 211
Y + +F+SL +L+++++
Sbjct: 61 YFL-WVVKFNSLNELVDYHR 79
>pdb|2FCI|A Chain A, Structural Basis For The Requirement Of Two
Phosphotyrosines In Signaling Mediated By Syk Tyrosine
Kinase
pdb|2PLD|A Chain A, Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of
Phospholipase C-gamma1 Complexed With A High Affinity
Binding Peptide
pdb|2PLE|A Chain A, Nuclear Magnetic Resonance Structure Of An Sh2 Domain Of
Phospholipase C-Gamma1 Complexed With A High Affinity
Binding Peptide
Length = 105
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDC 62
S+ W+H S++ +AE +L+ DG+FLVR R+ P + +S R G++ H ++Q G
Sbjct: 8 SKEWYHASLTRAQAEHMLMRVPRDGAFLVR-KRNEPNSYAISFRAEGKIKHCRVQQEGQT 66
Query: 63 YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
L G +F +L +L+ +Y E +K ++L+YP++
Sbjct: 67 VML-GNSEFDSLVDLISYY-EKHPLYRK-----MKLRYPIN 100
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 60/122 (49%), Gaps = 29/122 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
++ W+H L+ +AE ++++ ++G+FLVR+ +++P
Sbjct: 8 SKEWYHASLTRAQAEHMLMRVPRDGAFLVRK------------------------RNEPN 43
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
+ +S R + K+ H ++ + + +G E FDSL LI +Y+++P+ + L+ P
Sbjct: 44 SYAISFRAEGKIKHCRVQQEGQTVMLGNSE-FDSLVDLISYYEKHPLYRK----MKLRYP 98
Query: 229 FN 230
N
Sbjct: 99 IN 100
>pdb|3EAZ|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl-
Terminal Src Kinase), C122s Mutant
Length = 106
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 24/102 (23%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG+++ ++AE+L L + G FLVRES + PGD+
Sbjct: 10 WFHGKITREQAERL------------------------LYPPETGLFLVRESTNYPGDYT 45
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRN 213
L V +D KV H I A K + F++L QL+EHY +
Sbjct: 46 LCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSD 87
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S WFH I+ +AE LL G FLVR S + PGD+TL V +G+V H +I
Sbjct: 5 LSLMPWFHGKITREQAERLLYPPE-TGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHA 63
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
+ F L +LV+ Y + L R
Sbjct: 64 SKLSIDEEVYFENLMQLVEHYTSDADGLCTR 94
>pdb|3EAC|A Chain A, Crystal Structure Of Sh2 Domain Of Human Csk (Carboxyl-
Terminal Src Kinase), Oxidized Form
Length = 106
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG+++ ++AE+L L + G FLVRES + PGD+
Sbjct: 10 WFHGKITREQAERL------------------------LYPPETGLFLVRESTNYPGDYT 45
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRN 213
L V D KV H I A K + F++L QL+EHY +
Sbjct: 46 LCVSCDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSD 87
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S WFH I+ +AE LL G FLVR S + PGD+TL V +G+V H +I
Sbjct: 5 LSLMPWFHGKITREQAERLLYPPE-TGLFLVRESTNYPGDYTLCVSCDGKVEHYRIMYHA 63
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
+ F L +LV+ Y + L R
Sbjct: 64 SKLSIDEEVYFENLMQLVEHYTSDADGLCTR 94
>pdb|1R1P|A Chain A, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|B Chain B, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|C Chain C, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (lat) By The Adaptor Protein Gads
pdb|1R1P|D Chain D, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (lat) By The Adaptor Protein Gads
pdb|1R1Q|A Chain A, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (Lat) By The Adaptor Protein Gads
pdb|1R1Q|B Chain B, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|A Chain A, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|C Chain C, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|E Chain E, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (Lat) By The Adaptor Protein Gads
pdb|1R1S|G Chain G, Structural Basis For Differential Recognition Of
Tyrosine Phosphorylated Sites In The Linker For
Activation Of T Cells (Lat) By The Adaptor Protein Gads
Length = 100
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI-QNTGDCYD 64
WFH +S +AE LL+ + G F++R S+S+PGDF++SVR +V H K+ ++T Y
Sbjct: 11 WFHEGLSRHQAENLLMGKDI-GFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYF 69
Query: 65 LYGGEKFATLSELVQFY 81
L+ EKF +L++LV +Y
Sbjct: 70 LW-TEKFPSLNKLVDYY 85
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 103 SCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRE 162
S D WFH LS +AE L++ GK+ F F++R
Sbjct: 2 SFIDIEFPEWFHEGLSRHQAENLLM--GKDIGF----------------------FIIRA 37
Query: 163 SQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYK 211
SQS PGDF +SVR +D V H + + E+F SL +L+++Y+
Sbjct: 38 SQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYR 86
>pdb|2GSB|A Chain A, Solution Structure Of The Second Sh2 Domain Of Human Ras
Gtpase-Activating Protein 1
Length = 119
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WFH IS EA LL+ G SFLVRPS + PGD++L R N + KI T + +
Sbjct: 18 WFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFM 77
Query: 66 YGGEKFATLSELVQFYMENQGQLKKRNQEVIE---LKYPLSCAD 106
GG + ++ +++ Y R ++++E LK P+ D
Sbjct: 78 MGGRYYNSIGDIIDHY---------RKEQIVEGYYLKEPVPMQD 112
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 27/117 (23%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG++S +EA L++ G+ SFLVR S + PGD+
Sbjct: 18 WFHGKIS-----------------------KQEAYNLLMTVGQVCSFLVRPSDNTPGDYS 54
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
L RT++ + I + GG ++S+ +I+HY++ +VE +LK+P
Sbjct: 55 LYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG----YYLKEP 107
>pdb|2LCT|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With
A Syk-Derived Doubly Phosphorylated Peptide
Length = 107
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S W+ + AE +L R DG+FLVR + +F +S++ N EV HIKI
Sbjct: 6 LSVHLWYAGPMERAGAESILANRS-DGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAE 64
Query: 61 DCYDLYGGEKFATLSELVQFYMEN 84
Y + + F L+ELV+FY +N
Sbjct: 65 GLYRITEKKAFRGLTELVEFYQQN 88
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 149 ILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIE 208
IL +G+FLVR+ +F +S++ + +V H+ I Y + + F LT+L+E
Sbjct: 24 ILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVE 83
Query: 209 HYKRNPM 215
Y++N +
Sbjct: 84 FYQQNSL 90
>pdb|2CRH|A Chain A, Solution Structure Of The Sh2 Domain Of Human Proto-
Oncogene Protein Vav1
pdb|2ROR|A Chain A, Solution Structure Of The Vav1 Sh2 Domain Complexed With A
Tyrosine-Phosphorylated Peptide From Slp76
Length = 138
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S W+ + AE +L R DG+FLVR + +F +S++ N EV HIKI
Sbjct: 23 LSVHLWYAGPMERAGAESILANRS-DGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAE 81
Query: 61 DCYDLYGGEKFATLSELVQFYMEN 84
Y + + F L+ELV+FY +N
Sbjct: 82 GLYRITEKKAFRGLTELVEFYQQN 105
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 149 ILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIE 208
IL +G+FLVR+ +F +S++ + +V H+ I Y + + F LT+L+E
Sbjct: 41 ILANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVE 100
Query: 209 HYKRNPM 215
Y++N +
Sbjct: 101 FYQQNSL 107
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 28/117 (23%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG+++ ++AE+L L + G FLVRES + PGD+
Sbjct: 82 WFHGKITREQAERL------------------------LYPPETGLFLVRESTNYPGDYT 117
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
L V + KV H I A K + F++L QL+EHY + G L +P
Sbjct: 118 LCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYT----TDADGLCTRLIKP 170
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S WFH I+ +AE LL G FLVR S + PGD+TL V G+V H +I
Sbjct: 77 LSLMPWFHGKITREQAERLLYPPE-TGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHA 135
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
+ F L +LV+ Y + L R
Sbjct: 136 SKLSIDEEVYFENLMQLVEHYTTDADGLCTR 166
>pdb|2LQN|A Chain A, Solution Structure Of Crkl
Length = 303
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 201
S++ Q LQ ++G FLVR+S + PGD+VLSV + +V+H +I + G ++FD
Sbjct: 20 SRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFD 79
Query: 202 SLTQLIEHYK 211
L L+E YK
Sbjct: 80 HLPALLEFYK 89
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+ +S EA+ L + + G FLVR S + PGD+ LSV N V+H I + +
Sbjct: 14 WYMGPVSRQEAQTRLQGQRH-GMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFK 72
Query: 66 YGGEKFATLSELVQFY 81
G ++F L L++FY
Sbjct: 73 IGDQEFDHLPALLEFY 88
>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl
Length = 303
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 201
S++ Q LQ ++G FLVR+S + PGD+VLSV + +V+H +I + G ++FD
Sbjct: 20 SRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFD 79
Query: 202 SLTQLIEHYK 211
L L+E YK
Sbjct: 80 HLPALLEFYK 89
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+ +S EA+ L + + G FLVR S + PGD+ LSV N V+H I + +
Sbjct: 14 WYMGPVSRQEAQTRLQGQRH-GMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFK 72
Query: 66 YGGEKFATLSELVQFY 81
G ++F L L++FY
Sbjct: 73 IGDQEFDHLPALLEFY 88
>pdb|2EO3|A Chain A, Solution Structure Of The Sh2 Domain From Human Crk-Like
Protein
Length = 111
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 201
S++ Q LQ ++G FLVR+S + PGD+VLSV + +V+H +I + G ++FD
Sbjct: 27 SRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFD 86
Query: 202 SLTQLIEHYK 211
L L+E YK
Sbjct: 87 HLPALLEFYK 96
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+ +S EA+ L + + G FLVR S + PGD+ LSV N V+H I + +
Sbjct: 21 WYMGPVSRQEAQTRLQGQRH-GMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFK 79
Query: 66 YGGEKFATLSELVQFY 81
G ++F L L++FY
Sbjct: 80 IGDQEFDHLPALLEFY 95
>pdb|3S9K|A Chain A, Crystal Structure Of The Itk Sh2 Domain
Length = 118
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 17/120 (14%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL------NGEVTHI 54
+ + W++ SIS +AE LLL+ G +G+F+VR SR+ PG +T+SV N + H
Sbjct: 6 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHY 64
Query: 55 KIQNTGDCYD-LYGGEK--FATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTER 111
I+ T D Y EK F ++ L+Q++ N G L V L+YP+ C P R
Sbjct: 65 HIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGL------VTRLRYPV-CGSPGIHR 117
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 37/129 (28%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
T W++ +S +AE+L+L GK G+F+VR+S++ PG
Sbjct: 8 TYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT------------------------PG 43
Query: 169 DFVLSVRT------DDKVTHVMIR---CQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETS 219
+ +SV T + + H I+ ++Y V FDS+ LI++++ N
Sbjct: 44 TYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYN----GG 99
Query: 220 GTVVHLKQP 228
G V L+ P
Sbjct: 100 GLVTRLRYP 108
>pdb|3T04|A Chain A, Crystal Structure Of Monobody 7c12ABL1 SH2 DOMAIN COMPLEX
pdb|3UYO|A Chain A, Crystal Structure Of Monobody Sh13ABL1 SH2 DOMAIN COMPLEX
Length = 123
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 200
S+ A + +L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F
Sbjct: 24 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRF 83
Query: 201 DSLTQLIEHY 210
++L +L+ H+
Sbjct: 84 NTLAELVHHH 93
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+H +S AE LL G +GSFLVR S S+PG ++S+R G V H +I D
Sbjct: 18 WYHGPVSRNAAE-YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLY 76
Query: 66 YGGE-KFATLSELVQ 79
E +F TL+ELV
Sbjct: 77 VSSESRFNTLAELVH 91
>pdb|3K2M|A Chain A, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
pdb|3K2M|B Chain B, Crystal Structure Of Monobody Ha4ABL1 SH2 DOMAIN COMPLEX
Length = 112
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 200
S+ A + +L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F
Sbjct: 13 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRF 72
Query: 201 DSLTQLIEHY 210
++L +L+ H+
Sbjct: 73 NTLAELVHHH 82
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+H +S AE LL G +GSFLVR S S+PG ++S+R G V H +I D
Sbjct: 7 WYHGPVSRNAAE-YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLY 65
Query: 66 YGGE-KFATLSELVQ 79
E +F TL+ELV
Sbjct: 66 VSSESRFNTLAELVH 80
>pdb|2ECD|A Chain A, Solution Structure Of The Human Abl2 Sh2 Domain
Length = 119
Score = 55.1 bits (131), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ W+H +S AE LL +GSFLVR S S+PG ++S+R G V H +I T
Sbjct: 13 LEKHSWYHGPVSRSAAE-YLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTA 71
Query: 61 DCYDLYGGE-KFATLSELVQFY 81
D E +F+TL+ELV +
Sbjct: 72 DGKVYVTAESRFSTLAELVHHH 93
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 200
S+ A + +L NGSFLVRES+S PG +S+R + +V H I A+ K V +F
Sbjct: 24 SRSAAEYLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRF 83
Query: 201 DSLTQLIEHY 210
+L +L+ H+
Sbjct: 84 STLAELVHHH 93
>pdb|2ABL|A Chain A, Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine Kinase
Length = 163
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 200
S+ A + +L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F
Sbjct: 78 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRF 137
Query: 201 DSLTQLIEHYKRNPMVETSGTVVHLKQP 228
++L +L+ H+ + + T +H P
Sbjct: 138 NTLAELVHHHST--VADGLITTLHYPAP 163
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+H +S AE LL G +GSFLVR S S+PG ++S+R G V H +I D
Sbjct: 72 WYHGPVSRNAAE-YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLY 130
Query: 66 YGGE-KFATLSELVQFY 81
E +F TL+ELV +
Sbjct: 131 VSSESRFNTLAELVHHH 147
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ W+H +S AE LL G +GSFLVR S S+PG ++S+R G V H +I
Sbjct: 99 LEKHSWYHGPVSRNAAE-YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTAS 157
Query: 61 DCYDLYGGE-KFATLSELVQ 79
D E +F TL+ELV
Sbjct: 158 DGKLYVSSESRFNTLAELVH 177
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 200
S+ A + +L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F
Sbjct: 110 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRF 169
Query: 201 DSLTQLIEHYKRNPMVETSGTVVHLKQP 228
++L +L+ H+ + + + T +H P
Sbjct: 170 NTLAELVHHH--STVADGLITTLHYPAP 195
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+H +S AE LL G +GSFLVR S S+PG ++S+R G V H +I D
Sbjct: 107 WYHGPVSRNAAE-YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLY 165
Query: 66 YGGE-KFATLSELVQ 79
E +F TL+ELV
Sbjct: 166 VSSESRFNTLAELVH 180
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 200
S+ A + +L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F
Sbjct: 113 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRF 172
Query: 201 DSLTQLIEHYKRNPMVETSGTVVHLKQP 228
++L +L+ H+ + + + T +H P
Sbjct: 173 NTLAELVHHH--STVADGLITTLHYPAP 198
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ W+H +S AE LL G +GSFLVR S S+PG ++S+R G V H +I
Sbjct: 141 LEKHSWYHGPVSRNAAE-YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTAS 199
Query: 61 DCYDLYGGE-KFATLSELVQ 79
D E +F TL+ELV
Sbjct: 200 DGKLYVSSESRFNTLAELVH 219
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 200
S+ A + +L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F
Sbjct: 152 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRF 211
Query: 201 DSLTQLIEHYKRNPMVETSGTVVHLKQP 228
++L +L+ H+ + + + T +H P
Sbjct: 212 NTLAELVHHH--STVADGLITTLHYPAP 237
>pdb|1MW4|A Chain A, Solution Structure Of The Human Grb7-Sh2 Domain In Complex
With A 10 Amino Acid Peptide Py1139
pdb|2QMS|A Chain A, Crystal Structure Of A Signaling Molecule
pdb|2QMS|B Chain B, Crystal Structure Of A Signaling Molecule
pdb|2QMS|C Chain C, Crystal Structure Of A Signaling Molecule
pdb|2QMS|D Chain D, Crystal Structure Of A Signaling Molecule
pdb|2L4K|A Chain A, Water Refined Solution Structure Of The Human Grb7-Sh2
Domain In Complex With The 10 Amino Acid Peptide Py1139
Length = 120
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 27/117 (23%)
Query: 102 LSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVR 161
LS A T+ WFHG++S +E+++LI Q+G LV +G FLVR
Sbjct: 9 LSAAIHRTQLWFHGRISREESQRLIGQQG-----LV-----------------DGLFLVR 46
Query: 162 ESQSKPGDFVLSVRTDDKVTHVMIRCQAEK----YDVGGGE-QFDSLTQLIEHYKRN 213
ESQ P FVLS+ KV H +I E+ + + G+ +F L QL+E ++ N
Sbjct: 47 ESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLN 103
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 3 SRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD 61
++ WFH IS E++ L+ ++G DG FLVR S+ NP F LS+ +V H I + +
Sbjct: 16 TQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEE 75
Query: 62 CYDLY-----GGEKFATLSELVQFYMENQGQL 88
LY G +F L +LV+F+ N+G L
Sbjct: 76 EGRLYFSMDDGQTRFTDLLQLVEFHQLNRGIL 107
>pdb|3PQZ|A Chain A, Grb7 Sh2 With Peptide
pdb|3PQZ|B Chain B, Grb7 Sh2 With Peptide
pdb|3PQZ|C Chain C, Grb7 Sh2 With Peptide
pdb|3PQZ|D Chain D, Grb7 Sh2 With Peptide
Length = 117
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 27/117 (23%)
Query: 102 LSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVR 161
LS A T+ WFHG++S +E+++LI Q+G LV +G FLVR
Sbjct: 6 LSAAIHRTQLWFHGRISREESQRLIGQQG-----LV-----------------DGLFLVR 43
Query: 162 ESQSKPGDFVLSVRTDDKVTHVMIRCQAEK----YDVGGGE-QFDSLTQLIEHYKRN 213
ESQ P FVLS+ KV H +I E+ + + G+ +F L QL+E ++ N
Sbjct: 44 ESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLN 100
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 3 SRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD 61
++ WFH IS E++ L+ ++G DG FLVR S+ NP F LS+ +V H I + +
Sbjct: 13 TQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEE 72
Query: 62 CYDLY-----GGEKFATLSELVQFYMENQGQL 88
LY G +F L +LV+F+ N+G L
Sbjct: 73 EGRLYFSMDDGQTRFTDLLQLVEFHQLNRGIL 104
>pdb|1AB2|A Chain A, Three-Dimensional Solution Structure Of The Src Homology
2 Domain Of C-Abl
Length = 109
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ W+H +S AE LL G +GSFLVR S S+PG ++S+R G V H +I
Sbjct: 6 LEKHSWYHGPVSRNAAE-YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTAS 64
Query: 61 DCYDLYGGE-KFATLSELVQFY 81
D E +F TL+ELV +
Sbjct: 65 DGKLYVSSESRFNTLAELVHHH 86
Score = 52.0 bits (123), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 200
S+ A + +L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F
Sbjct: 17 SRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRF 76
Query: 201 DSLTQLIEHY 210
++L +L+ H+
Sbjct: 77 NTLAELVHHH 86
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 37/251 (14%)
Query: 6 WFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQ-NTGDCY 63
+F+ SIS EAE L G DG FL+R + G + LS+ + H I+ Y
Sbjct: 10 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 69
Query: 64 DLYGGEKFATLSELVQFYMENQGQL-----KKRNQE--------VIELKYPLSCADPTTE 110
+ GG+ +EL +FY + L K N+ V + D +
Sbjct: 70 AIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQ 129
Query: 111 RWFHGQLSGKEAEQLILQKGKNGSFLV-----------RESQSKEAEQLILQKGK--NGS 157
W +L G+ EQ I+ + L+ S ++E + L G +G
Sbjct: 130 TW---KLEGEALEQAIISQAPQVEKLIATTAHERMPWYHSSLTREEAERKLYSGAQTDGK 186
Query: 158 FLVRESQSKPGDFVLSVRTDDKVTHVMI-RCQAEKYDVGGGEQFDSLTQLIEHYKRNPMV 216
FL+R + + G + LS+ V H +I + +A KY + G +FD+L QL+E+ K +
Sbjct: 187 FLLRPRKEQ-GTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLK----L 241
Query: 217 ETSGTVVHLKQ 227
+ G + LK+
Sbjct: 242 KADGLIYCLKE 252
>pdb|2OQ1|A Chain A, Tandem Sh2 Domains Of Zap-70 With 19-Mer Zeta1 Peptide
Length = 254
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 37/251 (14%)
Query: 6 WFHPSISGVEAEV-LLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQ-NTGDCY 63
+F+ SIS EAE L L DG FL+R + G + LS+ + H I+ Y
Sbjct: 8 FFYGSISRAEAEEHLKLAGXADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 67
Query: 64 DLYGGEKFATLSELVQFYMENQGQL-----KKRNQE--------VIELKYPLSCADPTTE 110
+ GG+ +EL +FY + L K N+ V + D +
Sbjct: 68 AIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAXVRDYVRQ 127
Query: 111 RWFHGQLSGKEAEQLILQKGKNGSFLV-----------RESQSKEAEQLILQKGK--NGS 157
W +L G+ EQ I+ + L+ S ++E + L G +G
Sbjct: 128 TW---KLEGEALEQAIISQAPQVEKLIATTAHERXPWYHSSLTREEAERKLYSGAQTDGK 184
Query: 158 FLVRESQSKPGDFVLSVRTDDKVTHVMI-RCQAEKYDVGGGEQFDSLTQLIEHYKRNPMV 216
FL+R + + G + LS+ V H +I + +A KY + G +FD+L QL+E+ K +
Sbjct: 185 FLLRPRKEQ-GTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLK----L 239
Query: 217 ETSGTVVHLKQ 227
+ G + LK+
Sbjct: 240 KADGLIYCLKE 250
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 140 SQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGE 198
S+++ E L L +G FL+R+ G +VLS+ D + H I Q Y + GG+
Sbjct: 14 SRAEAEEHLKLAGXADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGK 73
Query: 199 QFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 230
+L E Y R+P G +L++P N
Sbjct: 74 AHCGPAELCEFYSRDP----DGLPCNLRKPCN 101
>pdb|1LUI|A Chain A, Nmr Structures Of Itk Sh2 Domain, Pro287cis Isoform,
Ensemble Of 20 Low Energy Structures
pdb|1LUK|A Chain A, Nmr Structure Of The Itk Sh2 Domain, Pro287cis, Energy
Minimized Average Structure
pdb|1LUM|A Chain A, Nmr Structure Of The Itk Sh2 Domain, Pro287trans, 20 Low
Energy Structures
pdb|1LUN|A Chain A, Nmr Structure Of The Itk Sh2 Domain, Pro287trans, Energy
Minimized Average Structure
Length = 110
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL------NGEVTHI 54
+ + W++ SIS +AE LLL+ G +G+F+VR SR+ PG +T+SV N + H
Sbjct: 4 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHY 62
Query: 55 KIQNTGDCYD-LYGGEK--FATLSELVQFYMENQGQLKKRNQEVIELKYPL 102
I+ T D Y EK F ++ L+Q++ N G L V L+YP+
Sbjct: 63 HIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGL------VTRLRYPV 107
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 37/129 (28%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
T W++ +S +AE+L+L GK G+F+VR+S++ PG
Sbjct: 6 TYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT------------------------PG 41
Query: 169 DFVLSVRTDDKVT------HVMIR---CQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETS 219
+ +SV T ++ H I+ ++Y V FDS+ LI++++ N
Sbjct: 42 TYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYN----GG 97
Query: 220 GTVVHLKQP 228
G V L+ P
Sbjct: 98 GLVTRLRYP 106
>pdb|2ETZ|A Chain A, The Nmr Minimized Average Structure Of The Itk Sh2 Domain
Bound To A Phosphopeptide
pdb|2EU0|A Chain A, The Nmr Ensemble Structure Of The Itk Sh2 Domain Bound To
A Phosphopeptide
Length = 109
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL------NGEVTHI 54
+ + W++ SIS +AE LLL+ G +G+F+VR SR+ PG +T+SV N + H
Sbjct: 4 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHY 62
Query: 55 KIQNTGDCYD-LYGGEK--FATLSELVQFYMENQGQLKKRNQEVIELKYPL 102
I+ T D Y EK F ++ L+Q++ N G L V L+YP+
Sbjct: 63 HIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGL------VTRLRYPV 107
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 37/129 (28%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
T W++ +S +AE+L+L GK G+F+VR+S++ PG
Sbjct: 6 TYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT------------------------PG 41
Query: 169 DFVLSVRTDDKVT------HVMIR---CQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETS 219
+ +SV T ++ H I+ ++Y V FDS+ LI++++ N
Sbjct: 42 TYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYN----GG 97
Query: 220 GTVVHLKQP 228
G V L+ P
Sbjct: 98 GLVTRLRYP 106
>pdb|1M61|A Chain A, Crystal Structure Of The Apo Sh2 Domains Of Zap-70
Length = 259
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 37/251 (14%)
Query: 6 WFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQ-NTGDCY 63
+F+ SIS EAE L G DG FL+R + G + LS+ + H I+ Y
Sbjct: 13 FFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTY 72
Query: 64 DLYGGEKFATLSELVQFYMENQGQL-----KKRNQE--------VIELKYPLSCADPTTE 110
+ GG+ +EL +FY + L K N+ V + D +
Sbjct: 73 AIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQ 132
Query: 111 RWFHGQLSGKEAEQLILQKGKNGSFLV-----------RESQSKEAEQLILQKGK--NGS 157
W +L G+ EQ I+ + L+ S ++E + L G +G
Sbjct: 133 TW---KLEGEALEQAIISQAPQVEKLIATTAHERMPWYHSSLTREEAERKLYSGAQTDGK 189
Query: 158 FLVRESQSKPGDFVLSVRTDDKVTHVMI-RCQAEKYDVGGGEQFDSLTQLIEHYKRNPMV 216
FL+R + + G + LS+ V H +I + +A KY + G +FD+L QL+E+ K +
Sbjct: 190 FLLRPRKEQ-GTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLK----L 244
Query: 217 ETSGTVVHLKQ 227
+ G + LK+
Sbjct: 245 KADGLIYCLKE 255
>pdb|2K79|B Chain B, Solution Structure Of The Binary Complex Between The Sh3
And Sh2 Domain Of Interleukin-2 Tyrosine Kinase
pdb|2K7A|B Chain B, Ensemble Structures Of The Binary Complex Between The Sh3
And Sh2 Domain Of Interleukin-2 Tyrosine Kinase
Length = 110
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 16/111 (14%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL------NGEVTHI 54
+ + W++ SIS +AE LLL+ G +G+F+VR SR+ PG +T+SV N + H
Sbjct: 5 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHY 63
Query: 55 KIQNTGDCYD-LYGGEK--FATLSELVQFYMENQGQLKKRNQEVIELKYPL 102
I+ T D Y EK F ++ L+Q++ N G L V L+YP+
Sbjct: 64 HIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGL------VTRLRYPV 108
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 37/129 (28%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
T W++ +S +AE+L+L GK G+F+VR+S++ PG
Sbjct: 7 TYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT------------------------PG 42
Query: 169 DFVLSVRTDDKVT------HVMIR---CQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETS 219
+ +SV T ++ H I+ ++Y V FDS+ LI++++ N
Sbjct: 43 TYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYN----GG 98
Query: 220 GTVVHLKQP 228
G V L+ P
Sbjct: 99 GLVTRLRYP 107
>pdb|2DX0|A Chain A, Crystal Structure Of The N-Terminal Sh2 Domain Of Mouse
Phospholipase C-Gamma 2
pdb|2DX0|B Chain B, Crystal Structure Of The N-Terminal Sh2 Domain Of Mouse
Phospholipase C-Gamma 2
Length = 138
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 21/106 (19%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E+WFH ++ + + + +LQ E K+G+FLVRES++ P D
Sbjct: 22 EKWFHKKVESRTSAEKLLQ-----------------EYCAETGAKDGTFLVRESETFPND 64
Query: 170 FVLSVRTDDKVTHVMIRCQAE----KYDVGGGEQFDSLTQLIEHYK 211
+ LS +V H IR E KY + F+S+ LI+HY+
Sbjct: 65 YTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQHYR 110
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Query: 5 RWFHPSI-SGVEAEVLLLER-----GYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQN 58
+WFH + S AE LL E DG+FLVR S + P D+TLS +G V H +I++
Sbjct: 23 KWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRS 82
Query: 59 TGDC----YDLYGGEKFATLSELVQFYME 83
T + Y L F ++ L+Q Y E
Sbjct: 83 TMENGVMKYYLTDNLTFNSIYALIQHYRE 111
>pdb|2KK6|A Chain A, Solution Structure Of Sh2 Domain Of Proto-Oncogene
Tyrosine- Protein Kinase Fer From Homo Sapiens,
Northeast Structural Genomics Consortium (Nesg) Target
Hr3461d
Length = 116
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 28/124 (22%)
Query: 107 PTTER-WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQS 165
P E+ W+HG + EA++L+ K G FLVRES
Sbjct: 13 PLAEQDWYHGAIPRIEAQELL--------------------------KKQGDFLVRESHG 46
Query: 166 KPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHL 225
KPG++VLSV +D + H +I+ Y G F ++ QLI+H+ V T + V L
Sbjct: 47 KPGEYVLSVYSDGQRRHFIIQYVDNMYRF-EGTGFSNIPQLIDHHYTTKQVITKKSGVVL 105
Query: 226 KQPF 229
P
Sbjct: 106 LNPI 109
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
++ + W+H +I +EA+ LL ++G FLVR S PG++ LSV +G+ H IQ
Sbjct: 14 LAEQDWYHGAIPRIEAQELLKKQG---DFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVD 70
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
+ Y + G F+ + +L+ + + + K++ V+
Sbjct: 71 NMYR-FEGTGFSNIPQLIDHHYTTKQVITKKSGVVL 105
>pdb|1JWO|A Chain A, Crystal Structure Analysis Of The Sh2 Domain Of The Csk
Homologous Kinase Chk
Length = 97
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S WFH ISG EA V L+ DG FLVR S +PGD+ L V +V H ++ +
Sbjct: 1 LSLMPWFHGKISGQEA-VQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRD 59
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQL 88
+ F L ++V+ Y +++G +
Sbjct: 60 GHLTIDEAVFFCNLMDMVEHYSKDKGAI 87
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG++SG+EA Q LQ ++G FLVRES PGD+V
Sbjct: 6 WFHGKISGQEAVQQ------------------------LQPPEDGLFLVRESARHPGDYV 41
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRN 213
L V V H + + + F +L ++EHY ++
Sbjct: 42 LCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKD 83
>pdb|2EOB|A Chain A, Solution Structure Of The Second Sh2 Domain From Rat Plc
Gamma-2
Length = 124
Score = 49.3 bits (116), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDC 62
S+ W++ +S EAE +L+ DG+FL+R R + ++ R G+V H +I G
Sbjct: 18 SKPWYYDRLSRGEAEDMLMRIPRDGAFLIR-KREGTDSYAITFRARGKVKHCRINRDGRH 76
Query: 63 YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
+ L F +L ELV +Y ++ K R L+YP++
Sbjct: 77 FVLGTSAYFESLVELVSYYEKHALYRKMR------LRYPVT 111
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
Query: 101 PLSCADPTTER-WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFL 159
P+ +P + W++ +LS EAE ++++ ++G+FL+R+ + ++
Sbjct: 9 PVPNPNPHESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREGTDS-------------- 54
Query: 160 VRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPM 215
+ ++ R KV H I + +G F+SL +L+ +Y+++ +
Sbjct: 55 ----------YAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELVSYYEKHAL 100
>pdb|3US4|A Chain A, Crystal Structure Of A Sh2 Domain Of A
Megakaryocyte-Associated Tyrosine Kinase (Matk) From
Homo Sapiens At 1.50 A Resolution
Length = 98
Score = 49.3 bits (116), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S WFH ISG EA V L+ DG FLVR S +PGD+ L V +V H ++ +
Sbjct: 2 LSLXPWFHGKISGQEA-VQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRD 60
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQL 88
+ F L + V+ Y +++G +
Sbjct: 61 GHLTIDEAVFFCNLXDXVEHYSKDKGAI 88
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 24/102 (23%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG++SG+EA Q LQ ++G FLVRES PGD+V
Sbjct: 7 WFHGKISGQEAVQQ------------------------LQPPEDGLFLVRESARHPGDYV 42
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRN 213
L V V H + + + F +L +EHY ++
Sbjct: 43 LCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLXDXVEHYSKD 84
>pdb|2HDV|A Chain A, Crystal Structure Of The Src Homology-2 Domain Of The
Adapter Protein Sh2-B
pdb|2HDV|B Chain B, Crystal Structure Of The Src Homology-2 Domain Of The
Adapter Protein Sh2-B
pdb|2HDX|A Chain A, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|B Chain B, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|C Chain C, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|D Chain D, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|E Chain E, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
pdb|2HDX|F Chain F, Crystal Structure Of The Src Homology-2 Domain Of Sh2-B In
Complex With Jak2 Ptyr813 Phosphopeptide
Length = 111
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 21/109 (19%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG LS +A QL+L+ G G +G FLVR+S+++ G+ V
Sbjct: 11 WFHGMLSRLKAAQLVLEGGT---------------------GSHGVFLVRQSETRRGECV 49
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSG 220
L+ K H+ + A F S+ ++EH++ +P+ SG
Sbjct: 50 LTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEHFRVHPIPLESG 98
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 1 MSSRRWFHPSISGVEAEVLLLE--RGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQ- 57
+S WFH +S ++A L+LE G G FLVR S + G+ L+ G+ H+++
Sbjct: 6 LSGYPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSL 65
Query: 58 -NTGDC 62
G C
Sbjct: 66 NAAGQC 71
>pdb|3M7F|A Chain A, Crystal Structure Of The Nedd4 C2GRB10 SH2 COMPLEX
Length = 108
Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 3 SRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD 61
++ WFH IS E+ ++ ++G DG FL+R S+SNP F L++ + ++ + +I D
Sbjct: 4 TQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCED 63
Query: 62 CYDLY-----GGEKFATLSELVQFYMENQGQL 88
+ G KF+ L +LV FY N+G L
Sbjct: 64 DGQTFFSLDDGNTKFSDLIQLVDFYQLNKGVL 95
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
T+ WFHG++S +E+ ++I Q+G LV +G FL+R+SQS P
Sbjct: 4 TQHWFHGRISREESHRIIKQQG-----LV-----------------DGLFLLRDSQSNPK 41
Query: 169 DFVLSVRTDDKVTHVMI-RCQAEKYDV----GGGEQFDSLTQLIEHYKRNPMV 216
FVL++ K+ + I C+ + G +F L QL++ Y+ N V
Sbjct: 42 AFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKGV 94
>pdb|1NRV|A Chain A, Crystal Structure Of The Sh2 Domain Of Grb10
pdb|1NRV|B Chain B, Crystal Structure Of The Sh2 Domain Of Grb10
Length = 105
Score = 48.9 bits (115), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 3 SRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD 61
++ WFH IS E+ ++ ++G DG FL+R S+SNP F L++ + ++ + +I D
Sbjct: 4 TQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCED 63
Query: 62 CYDLY-----GGEKFATLSELVQFYMENQGQL 88
+ G KF+ L +LV FY N+G L
Sbjct: 64 DGQTFFSLDDGNTKFSDLIQLVDFYQLNKGVL 95
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
T+ WFHG++S +E+ ++I Q+G LV +G FL+R+SQS P
Sbjct: 4 TQHWFHGRISREESHRIIKQQG-----LV-----------------DGLFLLRDSQSNPK 41
Query: 169 DFVLSVRTDDKVTHVMI-RCQAEKYDV----GGGEQFDSLTQLIEHYKRNPMV 216
FVL++ K+ + I C+ + G +F L QL++ Y+ N V
Sbjct: 42 AFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKGV 94
>pdb|1CSY|A Chain A, Syk Tyrosine Kinase C-Terminal Sh2 Domain Complexed With A
Phosphopeptidefrom The Gamma Chain Of The High Affinity
Immunoglobin G Receptor, Nmr
pdb|1CSZ|A Chain A, Syk Tyrosine Kinase C-Terminal Sh2 Domain Complexed With A
Phosphopeptidefrom The Gamma Chain Of The High Affinity
Immunoglobin G Receptor, Nmr
Length = 112
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 24/100 (24%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG++S +E+EQ++L K NG FL+R ++ G +
Sbjct: 15 WFHGKISREESEQIVLIGSKT----------------------NGKFLIR-ARDNNGSYA 51
Query: 172 LSVRTDDKVTHVMI-RCQAEKYDVGGGEQFDSLTQLIEHY 210
L + + KV H I + + K + G++FD+L QL+EHY
Sbjct: 52 LCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHY 91
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 6 WFHPSISGVEAE-VLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI--QNTGDC 62
WFH IS E+E ++L+ +G FL+R +R N G + L + G+V H +I TG
Sbjct: 15 WFHGKISREESEQIVLIGSKTNGKFLIR-ARDNNGSYALCLLHEGKVLHYRIDKDKTGK- 72
Query: 63 YDLYGGEKFATLSELVQFY 81
+ G+KF TL +LV+ Y
Sbjct: 73 LSIPEGKKFDTLWQLVEHY 91
>pdb|1JU5|A Chain A, Ternary Complex Of An Crk Sh2 Domain, Crk-Derived
Phophopeptide, And Abl Sh3 Domain By Nmr Spectroscopy
Length = 109
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 17/87 (19%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG------ 195
S++ +LQ ++G FLVR+S + PGD+VLSV + +V+H +I + V
Sbjct: 8 SRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQP 67
Query: 196 -----------GGEQFDSLTQLIEHYK 211
G ++FDSL L+E YK
Sbjct: 68 PPGVSPSRLRIGDQEFDSLPALLEFYK 94
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI 56
W+ +S EA V LL+ G FLVR S ++PGD+ LSV N V+H I
Sbjct: 2 WYWGRLSRQEA-VALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 51
>pdb|2EYZ|A Chain A, Ct10-Regulated Kinase Isoform Ii
Length = 304
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 17/87 (19%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG------ 195
S++ +LQ ++G FLVR+S + PGD+VLSV + +V+H +I + V
Sbjct: 19 SRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQP 78
Query: 196 -----------GGEQFDSLTQLIEHYK 211
G ++FDSL L+E YK
Sbjct: 79 PPGVSPSRLRIGDQEFDSLPALLEFYK 105
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI 56
W+ +S EA V LL+ G FLVR S ++PGD+ LSV N V+H I
Sbjct: 13 WYWGRLSRQEA-VALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 62
>pdb|2DVJ|A Chain A, Phosphorylated Crk-Ii
Length = 230
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 17/87 (19%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG------ 195
S++ +LQ ++G FLVR+S + PGD+VLSV + +V+H +I + V
Sbjct: 21 SRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQP 80
Query: 196 -----------GGEQFDSLTQLIEHYK 211
G ++FDSL L+E YK
Sbjct: 81 PPGVSPSRLRIGDQEFDSLPALLEFYK 107
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI 56
W+ +S EA V LL+ G FLVR S ++PGD+ LSV N V+H I
Sbjct: 15 WYWGRLSRQEA-VALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 64
>pdb|2EYY|A Chain A, Ct10-Regulated Kinase Isoform I
Length = 204
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 17/87 (19%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG------ 195
S++ +LQ ++G FLVR+S + PGD+VLSV + +V+H +I + V
Sbjct: 19 SRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQP 78
Query: 196 -----------GGEQFDSLTQLIEHYK 211
G ++FDSL L+E YK
Sbjct: 79 PPGVSPSRLRIGDQEFDSLPALLEFYK 105
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI 56
W+ +S EA V LL+ G FLVR S ++PGD+ LSV N V+H I
Sbjct: 13 WYWGRLSRQEA-VALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 62
>pdb|2EYV|A Chain A, Sh2 Domain Of Ct10-Regulated Kinase
Length = 124
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 17/87 (19%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG------ 195
S++ +LQ ++G FLVR+S + PGD+VLSV + +V+H +I + V
Sbjct: 18 SRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQP 77
Query: 196 -----------GGEQFDSLTQLIEHYK 211
G ++FDSL L+E YK
Sbjct: 78 PPGVSPSRLRIGDQEFDSLPALLEFYK 104
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI 56
W+ +S EA V LL+ G FLVR S ++PGD+ LSV N V+H I
Sbjct: 12 WYWGRLSRQEA-VALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYII 61
>pdb|1G83|A Chain A, Crystal Structure Of Fyn Sh3-Sh2
pdb|1G83|B Chain B, Crystal Structure Of Fyn Sh3-Sh2
Length = 165
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 69/175 (39%), Gaps = 37/175 (21%)
Query: 59 TGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLS 118
T D + GEKF L+ + E + L I Y E W+ G+L
Sbjct: 16 TEDDLSFHKGEKFQILNSSEGDWWEAR-SLTTGETGYIPSNYVAPVDSIQAEEWYFGKLG 74
Query: 119 GKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVR--- 175
K+AE+ +L G G+FL+RES++ G + LS+R
Sbjct: 75 RKDAERQLLSFGN----------------------PRGTFLIRESETTKGAYSLSIRDWD 112
Query: 176 --TDDKVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRNPMVETSGTVV 223
D V H IR K D GG QF++L QL++HY +S VV
Sbjct: 113 DMKGDHVKHYKIR----KLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVV 163
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYD-GSFLVRPSRSNPGDFTLSVR----LNGE-VTHI 54
+ + W+ + +AE LL G G+FL+R S + G ++LS+R + G+ V H
Sbjct: 63 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHY 122
Query: 55 KIQNTGD-CYDLYGGEKFATLSELVQFYMENQGQLKKR 91
KI+ + Y + +F TL +LVQ Y E L R
Sbjct: 123 KIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSR 160
>pdb|1TCE|A Chain A, Solution Nmr Structure Of The Shc Sh2 Domain Complexed
With A Tyrosine-Phosphorylated Peptide From The T-Cell
Receptor, Minimized Average Structure
Length = 107
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WFHG+LS +EAE L+ QL NG FLVRES + PG
Sbjct: 7 EPWFHGKLSRREAEALL--------------------QL------NGDFLVRESTTTPGQ 40
Query: 170 FVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPM-VETSGTVVHLKQP 228
+VL+ + H+++ E +F+S++ LI ++ N + + ++G+ + L+QP
Sbjct: 41 YVLTGSQSGQPKHLLL-VDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQP 99
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WFH +S EAE LL +G FLVR S + PG + L+ +G+ H+ + +
Sbjct: 9 WFHGKLSRREAEALL---QLNGDFLVRESTTTPGQYVLTGSQSGQPKHLLLVDPEGVVR- 64
Query: 66 YGGEKFATLSELVQFYMENQ 85
+F ++S L+ ++M+N
Sbjct: 65 TKDHRFESVSHLISYHMDNH 84
>pdb|1MIL|A Chain A, Transforming Protein
Length = 104
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WFHG+LS +EAE L+ QL NG FLVRES + PG
Sbjct: 7 EPWFHGKLSRREAEALL--------------------QL------NGDFLVRESTTTPGQ 40
Query: 170 FVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPM-VETSGTVVHLKQP 228
+VL+ + H+++ E +F+S++ LI ++ N + + ++G+ + L+QP
Sbjct: 41 YVLTGLQSGQPKHLLL-VDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSELCLQQP 99
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WFH +S EAE LL +G FLVR S + PG + L+ +G+ H+ + +
Sbjct: 9 WFHGKLSRREAEALL---QLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVR- 64
Query: 66 YGGEKFATLSELVQFYMENQ 85
+F ++S L+ ++M+N
Sbjct: 65 TKDHRFESVSHLISYHMDNH 84
>pdb|2YSX|A Chain A, Solution Structure Of The Human Ship Sh2 Domain
Length = 119
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 21/117 (17%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W HG ++ +AE+L+ + GK+GSFLVR S+S + +N + R
Sbjct: 12 WNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYR---------- 61
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
+ DDK T + ++ F L QLIE YK+ M G V HL+ P
Sbjct: 62 ILPNEDDKFTVQASEGVSMRF-------FTKLDQLIEFYKKENM----GLVTHLQYP 107
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL-NGEVTHIKIQNTGDCYD 64
W H +I+ +AE LL G DGSFLVR S S + L V N T+ + N D +
Sbjct: 12 WNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFT 71
Query: 65 LYGGEK-----FATLSELVQFY-MENQGQLKKRNQEVIELKYPL 102
+ E F L +L++FY EN G V L+YP+
Sbjct: 72 VQASEGVSMRFFTKLDQLIEFYKKENMGL-------VTHLQYPV 108
>pdb|1AOT|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A
Phosphotyrosyl Peptide, Minimized Average Structure
pdb|1AOU|F Chain F, Nmr Structure Of The Fyn Sh2 Domain Complexed With A
Phosphotyrosyl Peptide, 22 Structures
Length = 106
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 36/125 (28%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+L K+AE+ +L G G+FL+RES++ G
Sbjct: 4 AEEWYFGKLGRKDAERQLLSFGN----------------------PRGTFLIRESETTKG 41
Query: 169 DFVLSVR-----TDDKVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRNPMVET 218
+ LS+R D V H IR K D GG QF++L QL++HY +
Sbjct: 42 AYSLSIRDWDDMKGDHVKHYKIR----KLDNGGYYITTRAQFETLQQLVQHYSERAAGLS 97
Query: 219 SGTVV 223
S VV
Sbjct: 98 SRLVV 102
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVR----LNGE-VTHI 54
+ + W+ + +AE LL G G+FL+R S + G ++LS+R + G+ V H
Sbjct: 2 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHY 61
Query: 55 KIQNTGD-CYDLYGGEKFATLSELVQFYMENQGQLKKR 91
KI+ + Y + +F TL +LVQ Y E L R
Sbjct: 62 KIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSR 99
>pdb|2DLY|A Chain A, Solution Structure Of The Sh2 Domain Of Murine
Fyn-Related Kinase
Length = 121
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 6 WFHPSISGVEAEV-LLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD-CY 63
WF +I +AE LL G+FL+R S S GDF+LSV G V H +I+ + +
Sbjct: 18 WFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGF 77
Query: 64 DLYGGEKFATLSELVQFY 81
L + F+TL+E V +Y
Sbjct: 78 FLTRRKVFSTLNEFVNYY 95
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 37/135 (27%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E WF G + +AE+ QL+ + + G+FL+RES+S+ G
Sbjct: 15 AEPWFFGAIKRADAEK----------------------QLLYSENQTGAFLIRESESQKG 52
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRNPMVETSGTVV 223
DF LSV + V H IR + D GG + F +L + + +Y + G V
Sbjct: 53 DFSLSVLDEGVVKHYRIR----RLDEGGFFLTRRKVFSTLNEFVNYY----TTTSDGLCV 104
Query: 224 HLKQPFNATRITVSN 238
L++P +I VS
Sbjct: 105 KLEKP--CLKIQVSG 117
>pdb|3UF4|A Chain A, Crystal Structure Of A Sh3 And Sh2 Domains Of Fyn Protein
(Proto- Concogene Tyrosine-Protein Kinase Fyn) From Mus
Musculus At 1.98 A Resolution
Length = 164
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 65/162 (40%), Gaps = 37/162 (22%)
Query: 59 TGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLS 118
T D + GEKF L+ + E + L I Y E W+ G+L
Sbjct: 17 TEDDLSFHKGEKFQILNSSEGDWWEAR-SLTTGETGYIPSNYVAPVDSIQAEEWYFGKLG 75
Query: 119 GKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVR--- 175
K+AE+ +L G G+FL+RES++ G + LS+R
Sbjct: 76 RKDAERQLLSFGN----------------------PRGTFLIRESETTKGAYSLSIRDWD 113
Query: 176 --TDDKVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHY 210
D V H IR K D GG QF++L QL++HY
Sbjct: 114 DXKGDHVKHYKIR----KLDNGGYYITTRAQFETLQQLVQHY 151
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYD-GSFLVRPSRSNPGDFTLSVR-----LNGEVTHI 54
+ + W+ + +AE LL G G+FL+R S + G ++LS+R V H
Sbjct: 64 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDXKGDHVKHY 123
Query: 55 KIQNTGD-CYDLYGGEKFATLSELVQFYMENQGQL 88
KI+ + Y + +F TL +LVQ Y E L
Sbjct: 124 KIRKLDNGGYYITTRAQFETLQQLVQHYSEKADGL 158
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 30/119 (25%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W+HG + E +L++ +G FLVRESQ K+ ++V
Sbjct: 15 WYHGAIPRAEVAELLVH---SGDFLVRESQGKQ------------------------EYV 47
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHY--KRNPMVETSGTVVHLKQP 228
LSV D H +I+ Y + GE F S+ LI+H + P+ + SG V+H P
Sbjct: 48 LSVLWDGLPRHFIIQSLDNLYRL-EGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVP 105
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 30/119 (25%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W+HG + E +L++ +G FLVRESQ K+ ++V
Sbjct: 15 WYHGAIPRAEVAELLVH---SGDFLVRESQGKQ------------------------EYV 47
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHY--KRNPMVETSGTVVHLKQP 228
LSV D H +I+ Y + GE F S+ LI+H + P+ + SG V+H P
Sbjct: 48 LSVLWDGLPRHFIIQSLDNLYRL-EGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVP 105
>pdb|1WQU|A Chain A, Solution Structure Of The Human Fes Sh2 Domain
pdb|2DCR|A Chain A, Fully Automated Solution Structure Determination Of The
Fes Sh2 Domain
Length = 114
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 30/119 (25%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W+HG + E +L++ +G FLVRESQ K+ ++V
Sbjct: 18 WYHGAIPRAEVAELLVH---SGDFLVRESQGKQ------------------------EYV 50
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHY--KRNPMVETSGTVVHLKQP 228
LSV D H +I+ Y + GE F S+ LI+H + P+ + SG V+H P
Sbjct: 51 LSVLWDGLPRHFIIQSLDNLYRL-EGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVP 108
>pdb|4F59|A Chain A, Triple Mutant Src Sh2 Domain
pdb|4F5A|A Chain A, Triple Mutant Src Sh2 Domain Bound To Phosphate Ion
pdb|4F5B|A Chain A, Triple Mutant Src Sh2 Domain Bound To Phosphotyrosine
Length = 112
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 36/116 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 8 AEEWYFGKITRRESERLLLNA----------------------ENPRGTFLVRESETVKG 45
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRNP 214
+ LSV D V H +IR K D GG QF+SL QL+ +Y ++
Sbjct: 46 AYALSVSDFDNAKGLNVKHYLIR----KLDSGGFYITSRTQFNSLQQLVAYYSKHA 97
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN +
Sbjct: 6 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETVKGAYALSVSDFDNAKGLNVKHY 65
Query: 53 HIKIQNTGDCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
I+ ++G Y + +F +L +LV +Y ++ L R
Sbjct: 66 LIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHR 103
>pdb|2LNW|A Chain A, Identification And Structural Basis For A Novel
Interaction Between Vav2 And Arap3
pdb|2LNX|A Chain A, Solution Structure Of Vav2 Sh2 Domain
Length = 122
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 149 ILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIE 208
+L+ +G++L+RE ++ F +S++ +D+V H+ + + + ++FDSL +L+E
Sbjct: 37 LLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVE 96
Query: 209 HYKRNPMVETSGTV-VHLKQPFNA 231
+Y+ + + E+ + LK P+ +
Sbjct: 97 YYQCHSLKESFKQLDTTLKYPYKS 120
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 20 LLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDLYGGEKFATLSELVQ 79
LL+ G++L+R + F +S++ N EV HIK+ + + +KF +L ELV+
Sbjct: 37 LLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVE 96
Query: 80 FYMENQGQLKKRNQEV-IELKYP 101
+Y + LK+ +++ LKYP
Sbjct: 97 YYQCH--SLKESFKQLDTTLKYP 117
>pdb|2DLZ|A Chain A, Solution Structure Of The Sh2 Domain Of Human Protein
Vav-2
Length = 118
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 20 LLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDLYGGEKFATLSELVQ 79
LL+ G++L+R + F +S++ N EV HIK+ + + +KF +L ELV+
Sbjct: 31 LLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVE 90
Query: 80 FYMENQGQLKKRNQEV-IELKYPLS 103
+Y + LK+ +++ LKYP S
Sbjct: 91 YYQCH--SLKESFKQLDTTLKYPYS 113
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 149 ILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIE 208
+L+ +G++L+RE ++ F +S++ +D+V H+ + + + ++FDSL +L+E
Sbjct: 31 LLKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVE 90
Query: 209 HYKRNPMVETSGTV-VHLKQPFN 230
+Y+ + + E+ + LK P++
Sbjct: 91 YYQCHSLKESFKQLDTTLKYPYS 113
>pdb|1H9O|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit:
C-Terminal Sh2 Domain Complexed With A Tyr751
Phosphopeptide From The Pdgf Receptor, Crystal Structure
At 1.79 A
pdb|1PIC|A Chain A, Phosphatidylinositol 3-Kinase, P85-Alpha Subunit: C-
Terminal Sh2 Domain Complexed With A Tyr751
Phosphopeptide From The Pdgf Receptor, Nmr, Minimized
Mean Structure
Length = 112
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 137 VRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG 196
V S +AE L+ K ++G+FLVRES SK G + SV D +V H +I A Y G
Sbjct: 14 VGSSNRNKAENLLRGK-RDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGY--GF 69
Query: 197 GEQFD---SLTQLIEHYKRNPMVETSGTV-VHLKQPFNA 231
E ++ SL +L+ HY+ +V+ + ++ V L P A
Sbjct: 70 AEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA 108
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 20 LLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDLYGGEK-FATLSELV 78
LL DG+FLVR S S G + SV ++GEV H I T Y +++L ELV
Sbjct: 25 LLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELV 83
Query: 79 QFYMENQGQLKKRNQEV-IELKYPL 102
Y L + N + + L YP+
Sbjct: 84 LHYQHT--SLVQHNDSLNVTLAYPV 106
>pdb|1QAD|A Chain A, Crystal Structure Of The C-Terminal Sh2 Domain Of The P85
Alpha Regulatory Subunit Of Phosphoinositide 3-Kinase:
An Sh2 Domain Mimicking Its Own Substrate
Length = 111
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 137 VRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG 196
V S +AE L+ K ++G+FLVRES SK G + SV D +V H +I A Y G
Sbjct: 13 VGSSNRNKAENLLRGK-RDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGY--GF 68
Query: 197 GEQFD---SLTQLIEHYKRNPMVETSGTV-VHLKQPFNA 231
E ++ SL +L+ HY+ +V+ + ++ V L P A
Sbjct: 69 AEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA 107
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 20 LLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDLYGGEK-FATLSELV 78
LL DG+FLVR S S G + SV ++GEV H I T Y +++L ELV
Sbjct: 24 LLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELV 82
Query: 79 QFYMENQGQLKKRNQEV-IELKYPL 102
Y L + N + + L YP+
Sbjct: 83 LHYQHT--SLVQHNDSLNVTLAYPV 105
>pdb|1BFI|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The
P85alpha Regulatory Subunit Of Phosphoinositide
3-Kinase, Nmr, 30 Structures
pdb|1BFJ|A Chain A, Solution Structure Of The C-Terminal Sh2 Domain Of The
P85alpha Regulatory Subunit Of Phosphoinositide
3-Kinase, Nmr, Minimized Average Structure
Length = 112
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 137 VRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG 196
V S +AE L+ K ++G+FLVRES SK G + SV D +V H +I A Y G
Sbjct: 14 VGSSNRNKAENLLRGK-RDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGY--GF 69
Query: 197 GEQFD---SLTQLIEHYKRNPMVETSGTV-VHLKQPFNA 231
E ++ SL +L+ HY+ +V+ + ++ V L P A
Sbjct: 70 AEPYNLYSSLKELVLHYQHTSLVQHNDSLNVTLAYPVYA 108
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 20 LLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDLYGGEK-FATLSELV 78
LL DG+FLVR S S G + SV ++GEV H I T Y +++L ELV
Sbjct: 25 LLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELV 83
Query: 79 QFYMENQGQLKKRNQEV-IELKYPL 102
Y L + N + + L YP+
Sbjct: 84 LHYQHT--SLVQHNDSLNVTLAYPV 106
>pdb|1O41|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78300.
pdb|1O42|A Chain A, Crystal Structure Of Sh2 In Complex With Ru81843.
pdb|1O43|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82129.
pdb|1O44|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85052
pdb|1O45|A Chain A, Crystal Structure Of Sh2 In Complex With Ru84687.
pdb|1O46|A Chain A, Crystal Structure Of Sh2 In Complex With Ru90395.
pdb|1O47|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82209.
pdb|1O48|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85053.
pdb|1O49|A Chain A, Crystal Structure Of Sh2 In Complex With Ru85493.
pdb|1O4A|A Chain A, Crystal Structure Of Sh2 In Complex With Ru82197.
pdb|1O4B|A Chain A, Crystal Structure Of Sh2 In Complex With Ru83876.
pdb|1O4D|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78262.
pdb|1O4E|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78299.
pdb|1O4H|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79072.
pdb|1O4I|A Chain A, Crystal Structure Of Sh2 In Complex With Pas219.
pdb|1O4J|A Chain A, Crystal Structure Of Sh2 In Complex With Iso24.
pdb|1O4K|A Chain A, Crystal Structure Of Sh2 In Complex With Pasbn.
pdb|1O4L|A Chain A, Crystal Structure Of Sh2 In Complex With Fragment2.
pdb|1O4M|A Chain A, Crystal Structure Of Sh2 In Complex With Malonicacid.
pdb|1O4N|A Chain A, Crystal Structure Of Sh2 In Complex With Oxalic Acid.
pdb|1O4O|A Chain A, Crystal Structure Of Sh2 In Complex With Phenylphosphate.
pdb|1O4P|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78791.
pdb|1O4Q|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79256.
pdb|1O4R|A Chain A, Crystal Structure Of Sh2 In Complex With Ru78783
Length = 108
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 36/115 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 5 EEWYFGKITRRESERLLLN----------------------AENPRGTFLVRESETTKGA 42
Query: 170 FVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRNP 214
+ LSV D V H IR K D GG QF+SL QL+ +Y ++
Sbjct: 43 YCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFNSLQQLVAYYSKHA 93
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN V
Sbjct: 2 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VK 59
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
H KI+ ++G Y + +F +L +LV +Y ++ L R
Sbjct: 60 HYKIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHR 99
>pdb|1CWD|L Chain L, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
pdb|1CWE|A Chain A, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
pdb|1CWE|C Chain C, Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
Length = 98
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 133 GSFLVRESQSKEAEQLILQKGK-NGSFLVRESQSKPGDFVLSVRTDDK-----VTHVMIR 186
GS+ + K+AE+ +L G +GSFL+RES+S G F LSVR D+ V H IR
Sbjct: 1 GSWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIR 60
Query: 187 CQAEKYDVGGGE-----QFDSLTQLIEHY 210
D GG F L +L+ HY
Sbjct: 61 ----NLDNGGFYISPRITFPGLHELVRHY 85
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 3 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 62
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 63 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 95
>pdb|1SHD|A Chain A, Peptide Inhibitors Of Src Sh3-Sh2-Phosphoprotein
Interactions
pdb|1HCT|B Chain B, Nmr Structure Of The Human Src Sh2 Domain Complex
pdb|1HCS|B Chain B, Nmr Structure Of The Human Src Sh2 Domain Complex
pdb|1A07|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Malonyl
Tyr-Glu-(N,N- Dipentyl Amine)
pdb|1A07|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Malonyl
Tyr-Glu-(N,N- Dipentyl Amine)
pdb|1A08|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Difluoro Phosphotyr-
Glu-(N,N-Dipentyl Amine)
pdb|1A08|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Difluoro Phosphotyr-
Glu-(N,N-Dipentyl Amine)
pdb|1A09|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Formyl
Phosphotyr-Glu- (N,N-Dipentyl Amine)
pdb|1A09|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Formyl
Phosphotyr-Glu- (N,N-Dipentyl Amine)
pdb|1A1B|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(N,N-
Dipentyl Amine)
pdb|1A1B|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(N,N-
Dipentyl Amine)
pdb|1A1C|A Chain A, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N-Me(- (Ch2)3-Cyclopentyl))
pdb|1A1C|B Chain B, C-Src (Sh2 Domain) Complexed With
Ace-Phosphotyr-Glu-(N-Me(- (Ch2)3-Cyclopentyl))
pdb|1A1E|A Chain A, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(3-
Butylpiperidine)
pdb|1A1E|B Chain B, C-Src (Sh2 Domain) Complexed With Ace-Phosphotyr-Glu-(3-
Butylpiperidine)
Length = 107
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 36/116 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 6 AEEWYFGKITRRESERLLLNA----------------------ENPRGTFLVRESETTKG 43
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRNP 214
+ LSV D V H IR K D GG QF+SL QL+ +Y ++
Sbjct: 44 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFNSLQQLVAYYSKHA 95
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN V
Sbjct: 4 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VK 61
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
H KI+ ++G Y + +F +L +LV +Y ++ L R
Sbjct: 62 HYKIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHR 101
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 64 AEEWYFGKITRRESERLLLNA----------------------ENPRGTFLVRESETTKG 101
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF+SL QL+ +Y ++
Sbjct: 102 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFNSLQQLVAYYSKH 152
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN V
Sbjct: 62 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VK 119
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
H KI+ ++G Y + +F +L +LV +Y ++ L R V P
Sbjct: 120 HYKIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKP 169
>pdb|2EKX|A Chain A, Solution Structure Of The Human Bmx Sh2 Domain
Length = 110
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 29/121 (23%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WF G +S ++EQL+ QKGK G+F+VR S + G + V +
Sbjct: 13 WFAGNISRSQSEQLLRQKGKEGAFMVRNSS------------QVGMYTVS---------L 51
Query: 172 LSVRTDDK---VTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQ 227
S +DK V H + AE K + FDS+ +LI +++ N ++G + L+
Sbjct: 52 FSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHN----SAGMITRLRH 107
Query: 228 P 228
P
Sbjct: 108 P 108
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 16/106 (15%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSV---RLN---GEVTHIKIQNT 59
WF +IS ++E LL ++G +G+F+VR S S G +T+S+ +N G V H +
Sbjct: 13 WFAGNISRSQSEQLLRQKGKEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHYHVHTN 71
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
+ LY E F ++ +L+ ++ N + + L++P+S
Sbjct: 72 AEN-KLYLAENYCFDSIPKLIHYHQHNSAGM------ITRLRHPVS 110
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 64 AEEWYFGKITRRESERLLLNA----------------------ENPRGTFLVRESETTKG 101
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF+SL QL+ +Y ++
Sbjct: 102 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFNSLQQLVAYYSKH 152
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN V
Sbjct: 62 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VK 119
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
H KI+ ++G Y + +F +L +LV +Y ++ L R V P
Sbjct: 120 HYKIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKP 169
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 64 AEEWYFGKITRRESERLLLNA----------------------ENPRGTFLVRESETTKG 101
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF+SL QL+ +Y ++
Sbjct: 102 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFNSLQQLVAYYSKH 152
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN V
Sbjct: 62 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VK 119
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
H KI+ ++G Y + +F +L +LV +Y ++ L R V P
Sbjct: 120 HYKIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKP 169
>pdb|1O4C|A Chain A, Crystal Structure Of Sh2 In Complex With Phosphate.
pdb|1O4F|A Chain A, Crystal Structure Of Sh2 In Complex With Ru79073.
pdb|1O4G|A Chain A, Crystal Structure Of Sh2 In Complex With Dpi59
Length = 108
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 36/115 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 5 EEWYFGKITRRESERLLLN----------------------AENPRGTFLVRESETTKGA 42
Query: 170 FVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRNP 214
+ LSV D V H IR K D GG QF+SL QL+ +Y ++
Sbjct: 43 YXLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFNSLQQLVAYYSKHA 93
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN V
Sbjct: 2 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYXLSVSDFDNAKGLN--VK 59
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
H KI+ ++G Y + +F +L +LV +Y ++ L R
Sbjct: 60 HYKIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHR 99
>pdb|2GE9|A Chain A, Solution Structures Of The Sh2 Domain Of Bruton's Tyrosine
Kinase
Length = 125
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL------NGEVTHIKIQNT 59
W+ ++ +AE LL + G +G F+VR S S G +T+SV G + H + +T
Sbjct: 13 WYSKHMTRSQAEQLLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCST 71
Query: 60 GDC-YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
Y L F+T+ EL+ ++ N L R LKYP+S
Sbjct: 72 PQSQYYLAEKHLFSTIPELINYHQHNSAGLISR------LKYPVS 110
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 21/119 (17%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W+ ++ +AEQL+ Q+GK G F+VR+S K G + V GD
Sbjct: 13 WYSKHMTRSQAEQLLKQEGKEGGFIVRDS------------SKAGKYTVSVFAKSTGDPQ 60
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 230
+R +V+ +Y + F ++ +LI +++ N ++G + LK P +
Sbjct: 61 GVIR-----HYVVCSTPQSQYYLAEKHLFSTIPELINYHQHN----SAGLISRLKYPVS 110
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 147 AEEWYFGKITRRESERLLLNA----------------------ENPRGTFLVRESETTKG 184
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF+SL QL+ +Y ++
Sbjct: 185 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFNSLQQLVAYYSKH 235
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN V
Sbjct: 145 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VK 202
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
H KI+ ++G Y + +F +L +LV +Y ++ L R V P
Sbjct: 203 HYKIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKP 252
>pdb|2DM0|A Chain A, Solution Structure Of The Sh2 Domain Of Human Tyrosine-
Protein Kinase Txk
Length = 125
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 16/107 (14%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGE------VTHIKIQNT 59
W+H +I+ +AE LL + +G+F+VR SR + G +T+SV + + H +I+
Sbjct: 18 WYHRNITRNQAEHLLRQESKEGAFIVRDSR-HLGSYTISVFMGARRSTEAAIKHYQIKKN 76
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKRNQEVIELKYPLSC 104
D Y E+ F ++ EL+ ++ N L R L+YP+
Sbjct: 77 -DSGQWYVAERHAFQSIPELIWYHQHNAAGLMTR------LRYPVGL 116
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W+H ++ +AE L+ Q+ K G+F+VR+S+ + + + G S
Sbjct: 18 WYHRNITRNQAEHLLRQESKEGAFIVRDSRHLGSYTISVFMGARRS-------------- 63
Query: 172 LSVRTDDKVTHVMIRCQ-AEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
T+ + H I+ + ++ V F S+ +LI +++ N +G + L+ P
Sbjct: 64 ----TEAAIKHYQIKKNDSGQWYVAERHAFQSIPELIWYHQHN----AAGLMTRLRYP 113
>pdb|1BLJ|A Chain A, Nmr Ensemble Of Blk Sh2 Domain, 20 Structures
pdb|1BLK|A Chain A, Nmr Ensemble Of Blk Sh2 Domain Using Chemical Shift
Refinement, 20 Structures
Length = 114
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 5 RWFHPSISGVEAE-VLLLERGYDGSFLVRPSRSNPGDFTLSVR---LNGEVT-HIKIQNT 59
+WF +IS +AE LL GSFL+R S SN G F+LSV+ GEV H KI++
Sbjct: 13 KWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSL 72
Query: 60 GD-CYDLYGGEKFATLSELVQFY 81
+ Y + F TL LVQ Y
Sbjct: 73 DNGGYYISPRITFPTLQALVQHY 95
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 27/109 (24%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E+WF +S K+AE+ QL+ K GSFL+RES+S G
Sbjct: 11 VEKWFFRTISRKDAER----------------------QLLAPMNKAGSFLIRESESNKG 48
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKR 212
F LSV+ V+ + D GG F +L L++HY +
Sbjct: 49 AFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSK 97
>pdb|1SKJ|A Chain A, Cocrystal Structure Of Urea-Substituted Phosphopeptide
Complex
Length = 113
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 36/116 (31%)
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
+ E W+ G+++ +E+E+L+L + G+FLVRES++
Sbjct: 2 SAEEWYFGKITRRESERLLLNP----------------------ENPRGTFLVRESETTK 39
Query: 168 GDFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
G + LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 40 GAYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 91
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 2 SSRRWFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVTH 53
S+ W+ I+ E+E LLL G+FLVR S + G + LSV LN V H
Sbjct: 2 SAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VKH 59
Query: 54 IKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEV 95
KI+ ++G Y + +F++L +LV +Y ++ L R V
Sbjct: 60 YKIRKLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHRLTNV 102
>pdb|1IJR|A Chain A, Crystal Structure Of Lck Sh2 Complexed With Nonpeptide
Phosphotyrosine Mimetic
Length = 104
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 3 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 40
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 41 FCLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 92
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 93 GLCTRLSRP 101
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F LSVR GEV H KI+N
Sbjct: 5 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKIRNL 64
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 65 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 97
>pdb|1A1A|A Chain A, C-Src (Sh2 Domain With C188a Mutation) Complexed With
Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine)
pdb|1A1A|B Chain B, C-Src (Sh2 Domain With C188a Mutation) Complexed With
Ace-Formyl Phosphotyr-Glu-(N,N-Dipentyl Amine)
Length = 107
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 36/116 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 6 AEEWYFGKITRRESERLLLN----------------------AENPRGTFLVRESETTKG 43
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRNP 214
+ LSV D V H IR K D GG QF+SL QL+ +Y ++
Sbjct: 44 AYSLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFNSLQQLVAYYSKHA 95
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G ++LSV LN V
Sbjct: 4 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYSLSVSDFDNAKGLN--VK 61
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
H KI+ ++G Y + +F +L +LV +Y ++ L R
Sbjct: 62 HYKIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHR 101
>pdb|1NZL|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyepyipi
pdb|1NZL|B Chain B, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyepyipi
pdb|1NZV|A Chain A, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyipyvpa
pdb|1NZV|B Chain B, Crystal Structure Of Src Sh2 Domain Bound To Doubly
Phosphorylated Peptide Pqpyipyvpa
Length = 103
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 1 AEEWYFGKITRRESERLLLNP----------------------ENPRGTFLVRESETTKG 38
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 39 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 89
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 6 WFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVTHIKIQ 57
W+ I+ E+E LLL G+FLVR S + G + LSV LN V H KI+
Sbjct: 4 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VKHYKIR 61
Query: 58 --NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEV 95
++G Y + +F++L +LV +Y ++ L R V
Sbjct: 62 KLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHRLTNV 100
>pdb|1P13|A Chain A, Crystal Structure Of The Src Sh2 Domain Complexed With
Peptide (Sdpyanfk)
pdb|1P13|B Chain B, Crystal Structure Of The Src Sh2 Domain Complexed With
Peptide (Sdpyanfk)
Length = 102
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 1 AEEWYFGKITRRESERLLLNP----------------------ENPRGTFLVRESETTKG 38
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 39 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 89
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 6 WFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVTHIKIQ 57
W+ I+ E+E LLL G+FLVR S + G + LSV LN V H KI+
Sbjct: 4 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VKHYKIR 61
Query: 58 --NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEV 95
++G Y + +F++L +LV +Y ++ L R V
Sbjct: 62 KLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHRLTNV 100
>pdb|1FBZ|A Chain A, Structure-Based Design Of A Novel, Osteoclast-Selective,
Nonpeptide Src Sh2 Inhibitor With In Vivo
Anti-Resorptive Activity
pdb|1FBZ|B Chain B, Structure-Based Design Of A Novel, Osteoclast-Selective,
Nonpeptide Src Sh2 Inhibitor With In Vivo
Anti-Resorptive Activity
Length = 104
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 3 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 40
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 41 FCLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 92
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 93 GLCTRLSRP 101
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F LSVR GEV H KI+N
Sbjct: 5 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFCLSVRDFDQNQGEVVKHYKIRNL 64
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 65 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 97
>pdb|1IS0|A Chain A, Crystal Structure Of A Complex Of The Src Sh2 Domain With
Conformationally Constrained Peptide Inhibitor
pdb|1IS0|B Chain B, Crystal Structure Of A Complex Of The Src Sh2 Domain With
Conformationally Constrained Peptide Inhibitor
pdb|2JYQ|A Chain A, Nmr Structure Of The Apo V-Src Sh2 Domain
Length = 106
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 2 AEEWYFGKITRRESERLLLNP----------------------ENPRGTFLVRESETTKG 39
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 40 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 90
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 6 WFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVTHIKIQ 57
W+ I+ E+E LLL G+FLVR S + G + LSV LN V H KI+
Sbjct: 5 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VKHYKIR 62
Query: 58 --NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
++G Y + +F++L +LV +Y ++ L R V
Sbjct: 63 KLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHRLTNVC 102
>pdb|1F1W|A Chain A, Src Sh2 Thref1trp Mutant Complexed With The Phosphopeptide
S(Ptr)vnvqn
pdb|1F2F|A Chain A, Src Sh2 Thref1trp Mutant
Length = 104
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 2 AEEWYFGKITRRESERLLLNP----------------------ENPRGTFLVRESETTKG 39
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 40 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYIWSRTQFSSLQQLVAYYSKH 90
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 6 WFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVTHIKIQ 57
W+ I+ E+E LLL G+FLVR S + G + LSV LN V H KI+
Sbjct: 5 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VKHYKIR 62
Query: 58 --NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEV 95
++G Y ++ +F++L +LV +Y ++ L R V
Sbjct: 63 KLDSGGFY-IWSRTQFSSLQQLVAYYSKHADGLCHRLTNV 101
>pdb|1SHA|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition
Domain Sh2 Of V-Src Complexed With
Tyrosine-Phosphorylated Peptides
pdb|1SHB|A Chain A, Crystal Structure Of The Phosphotyrosine Recognition
Domain Sh2 Of V-Src Complexed With
Tyrosine-Phosphorylated Peptides
pdb|1SPR|A Chain A, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|B Chain B, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|C Chain C, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPR|D Chain D, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|A Chain A, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|B Chain B, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
pdb|1SPS|C Chain C, Binding Of A High Affinity Phosphotyrosyl Peptide To The
Src Sh2 Domain: Crystal Structures Of The Complexed And
Peptide-Free Forms
Length = 104
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 2 AEEWYFGKITRRESERLLLNP----------------------ENPRGTFLVRESETTKG 39
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 40 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 90
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 6 WFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVTHIKIQ 57
W+ I+ E+E LLL G+FLVR S + G + LSV LN V H KI+
Sbjct: 5 WYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VKHYKIR 62
Query: 58 --NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
++G Y + +F++L +LV +Y ++ L R V
Sbjct: 63 KLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHRLTNVC 102
>pdb|1BKL|A Chain A, Self-Associated Apo Src Sh2 Domain
Length = 113
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 36/116 (31%)
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
+ E W+ G+++ +E+E L+L + G+FLVRES++
Sbjct: 2 SAEEWYFGKITRRESESLLLNP----------------------ENPRGTFLVRESETTK 39
Query: 168 GDFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
G + LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 40 GAYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 91
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 2 SSRRWFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVTH 53
S+ W+ I+ E+E LLL G+FLVR S + G + LSV LN V H
Sbjct: 2 SAEEWYFGKITRRESESLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VKH 59
Query: 54 IKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEV 95
KI+ ++G Y + +F++L +LV +Y ++ L R V
Sbjct: 60 YKIRKLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHRLTNV 102
>pdb|1BKM|A Chain A, Cocrystal Structure Of D-Amino Acid Substituted
Phosphopeptide Complex
Length = 113
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 36/116 (31%)
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
+ E W+ G+++ +E+E L+L + G+FLVRES++
Sbjct: 2 SAEEWYFGKITRRESEALLLNP----------------------ENPRGTFLVRESETTK 39
Query: 168 GDFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
G + LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 40 GAYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 91
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 2 SSRRWFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVTH 53
S+ W+ I+ E+E LLL G+FLVR S + G + LSV LN V H
Sbjct: 2 SAEEWYFGKITRRESEALLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VKH 59
Query: 54 IKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEV 95
KI+ ++G Y + +F++L +LV +Y ++ L R V
Sbjct: 60 YKIRKLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHRLTNV 102
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 51/115 (44%), Gaps = 36/115 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 65 AEEWYFGKITRRESERLLLNP----------------------ENPRGTFLVRESETTKG 102
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV D V H IR K D GG QF SL QL+ +Y ++
Sbjct: 103 AYCLSVSDFDNAKGLNVKHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 153
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVR-------LNGEVT 52
+ + W+ I+ E+E LLL G+FLVR S + G + LSV LN V
Sbjct: 63 IQAEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLN--VK 120
Query: 53 HIKIQ--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
H KI+ ++G Y + +F++L +LV +Y ++ L R V P
Sbjct: 121 HYKIRKLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHRLTNVCPTSKP 170
>pdb|1LCJ|A Chain A, Sh2 (Src Homology-2) Domain Of Human P56-Lck Tyrosine
Kinase Complexed With The 11 Residue Phosphotyrosyl
Peptide Epqpyeeipiyl
Length = 109
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 8 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 45
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 46 FSLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 97
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 98 GLCTRLSRP 106
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 10 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 69
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 70 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 102
>pdb|3NHN|A Chain A, Crystal Structure Of The Src-Family Kinase Hck
Sh3-Sh2-Linker Regulatory Region
Length = 193
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 38/156 (24%)
Query: 68 GEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQLIL 127
G++ L E +++ L R + I Y TE WF +S K+AE+ +L
Sbjct: 31 GDQMVVLEESGEWWKARS--LATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLL 88
Query: 128 QKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRT-----DDKVTH 182
G GSF++R+S++ G + LSVR D V H
Sbjct: 89 APGN----------------------MLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKH 126
Query: 183 VMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
IR D GG F +L +L++HYK+
Sbjct: 127 YKIRT----LDNGGFYISPRSTFSTLQELVDHYKKG 158
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSV-----RLNGEVTHI 54
+ + WF IS +AE LL G GSF++R S + G ++LSV R V H
Sbjct: 68 LETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHY 127
Query: 55 KIQ--NTGDCYDLYGGEKFATLSELVQFYME-NQGQLKK 90
KI+ + G Y + F+TL ELV Y + N G +K
Sbjct: 128 KIRTLDNGGFY-ISPRSTFSTLQELVDHYKKGNDGLCQK 165
>pdb|1BHF|A Chain A, P56lck Sh2 Domain Inhibitor Complex
pdb|1BHH|A Chain A, Free P56lck Sh2 Domain
Length = 108
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 7 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 44
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 45 FSLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 96
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 97 GLCTRLSRP 105
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 9 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 68
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 69 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 101
>pdb|1LKK|A Chain A, Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex With
The Phosphotyrosyl Peptide Ac-Ptyr-Glu-Glu-Ile (Pyeei
Peptide)
Length = 105
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 4 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 41
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 42 FSLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 93
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 94 GLCTRLSRP 102
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 6 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 65
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 66 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 98
>pdb|1LKL|A Chain A, Human P56-Lck Tyrosine Kinase Sh2 Domain In Complex With
The Phosphotyrosyl Peptide Ac-Ptyr-Glu-Glu-Gly (Pyeeg
Peptide)
Length = 104
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 3 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 40
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 41 FSLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 92
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 93 GLCTRLSRP 101
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 5 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 64
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 65 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 97
>pdb|1BHH|B Chain B, Free P56lck Sh2 Domain
Length = 103
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 2 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 39
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 40 FSLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 91
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 92 GLCTRLSRP 100
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 4 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 63
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 64 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 96
>pdb|2CS0|A Chain A, Solution Structure Of The Sh2 Domain Of Human Hsh2d
Protein
Length = 119
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WFH +IS +AE LLE GSFL+R S S+ G +TLS + H ++ D +
Sbjct: 18 WFHGAISREDAEN-LLESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFM 75
Query: 66 YGGEKFA--TLSELVQFYMEN 84
GEK A +L LV F+ +
Sbjct: 76 IPGEKVAHTSLDALVTFHQQK 96
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 27/106 (25%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG +S ++AE L+ ESQ GSFL+R S S G +
Sbjct: 18 WFHGAISREDAENLL------------ESQPL------------GSFLIRVSHSHVG-YT 52
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQF--DSLTQLIEHYKRNPM 215
LS + H M++ + + GE+ SL L+ +++ P+
Sbjct: 53 LSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPI 98
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 36/135 (26%)
Query: 88 LKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQ 147
L R + I Y TE WF +S K+AE+ +L G
Sbjct: 48 LATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPG----------------- 90
Query: 148 LILQKGKNGSFLVRESQSKPGDFVLSV-----RTDDKVTHVMIRCQAEKYDVGG-----G 197
GSF++R+S++ G + LSV R D V H IR D GG
Sbjct: 91 -----NMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRT----LDNGGFYISPR 141
Query: 198 EQFDSLTQLIEHYKR 212
F +L +L++HYK+
Sbjct: 142 STFSTLQELVDHYKK 156
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSV-----RLNGEVTHI 54
+ + WF IS +AE LL G GSF++R S + G ++LSV R V H
Sbjct: 67 LETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHY 126
Query: 55 KIQ--NTGDCYDLYGGEKFATLSELVQFYME-NQGQLKK 90
KI+ + G Y + F+TL ELV Y + N G +K
Sbjct: 127 KIRTLDNGGFY-ISPRSTFSTLQELVDHYKKGNDGLCQK 164
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 36/135 (26%)
Query: 88 LKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQ 147
L R + I Y TE WF +S K+AE+ +L G
Sbjct: 42 LATRKEGYIPSNYVARVDSLETEEWFFKGISRKDAERQLLAPG----------------- 84
Query: 148 LILQKGKNGSFLVRESQSKPGDFVLSV-----RTDDKVTHVMIRCQAEKYDVGG-----G 197
GSF++R+S++ G + LSV R D V H IR D GG
Sbjct: 85 -----NMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRT----LDNGGFYISPR 135
Query: 198 EQFDSLTQLIEHYKR 212
F +L +L++HYK+
Sbjct: 136 STFSTLQELVDHYKK 150
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSV-----RLNGEVTHI 54
+ + WF IS +AE LL G GSF++R S + G ++LSV R V H
Sbjct: 61 LETEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHY 120
Query: 55 KIQ--NTGDCYDLYGGEKFATLSELVQFYME-NQGQLKK 90
KI+ + G Y + F+TL ELV Y + N G +K
Sbjct: 121 KIRTLDNGGFY-ISPRSTFSTLQELVDHYKKGNDGLCQK 158
>pdb|1LCK|A Chain A, Sh3-Sh2 Domain Fragment Of Human P56-Lck Tyrosine Kinase
Complexed With The 10 Residue Synthetic Phosphotyrosyl
Peptide Tegqpyqpqpa
Length = 175
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 74 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 111
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 112 FSLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 163
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 164 GLCTRLSRP 172
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 76 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 136 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 168
>pdb|4D8K|A Chain A, Crystal Structure Of A Sh3-Sh2 Domains Of A
Lymphocyte-Specific Protein Tyrosine Kinase (Lck) From
Homo Sapiens At 2.36 A Resolution
Length = 175
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 51/129 (39%), Gaps = 40/129 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 74 EPWFFKNLSRKDAERQLLAPGNT----------------------HGSFLIRESESTAGS 111
Query: 170 FVLSVRTDDK-----VTHVMIRCQAEKYDVGGGE-----QFDSLTQLIEHYKRNPMVETS 219
F LSVR D+ V H IR D GG F L +L+ HY +
Sbjct: 112 FSLSVRDFDQNQGEVVKHYKIR----NLDNGGFYISPRITFPGLHELVRHYTN----ASD 163
Query: 220 GTVVHLKQP 228
G L +P
Sbjct: 164 GLCTRLSRP 172
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 76 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 135
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 136 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 168
>pdb|1X27|A Chain A, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|B Chain B, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|C Chain C, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|D Chain D, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|E Chain E, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
pdb|1X27|F Chain F, Crystal Structure Of Lck Sh2-Sh3 With Sh2 Binding Site Of
P130cas
Length = 167
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 19/97 (19%)
Query: 143 KEAEQLILQKGK-NGSFLVRESQSKPGDFVLSVRTDDK-----VTHVMIRCQAEKYDVGG 196
K+AE+ +L G +GSFL+RES+S G F LSVR D+ V H IR D GG
Sbjct: 76 KDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIR----NLDNGG 131
Query: 197 GE-----QFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
F L +L+ HY + G L +P
Sbjct: 132 FYISPRITFPGLHELVRHYTN----ASDGLCTRLSRP 164
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR----LNGEVT-HIKIQNT 59
WF ++S +AE LL G GSFL+R S S G F+LSVR GEV H KI+N
Sbjct: 68 WFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNL 127
Query: 60 GDCYDLYGGEK--FATLSELVQFYMENQGQLKKR 91
D Y + F L ELV+ Y L R
Sbjct: 128 -DNGGFYISPRITFPGLHELVRHYTNASDGLCTR 160
>pdb|1KC2|A Chain A, Structure Of The Triple (Lys(Beta)d3ala, Asp(Beta)c8ala,
Aspcd2ala) Mutant Of The Src Sh2 Domain Bound To The
Pqpyeeipi Peptide
Length = 103
Score = 41.6 bits (96), Expect = 9e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 36/114 (31%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 2 EEWYFGKITRRESERLLLNP----------------------ENPRGTFLVRESETTKGA 39
Query: 170 FVLSVRT-----DDKVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKRN 213
+ LSV V H IR K D GG QF SL QL+ +Y ++
Sbjct: 40 YCLSVSAFANAKGLNVAHYKIR----KLDSGGFYITSRTQFSSLQQLVAYYSKH 89
Score = 35.8 bits (81), Expect = 0.044, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 3 SRRWFHPSISGVEAEVLLLE-RGYDGSFLVRPSRSNPGDFTLSVRLNG-----EVTHIKI 56
+ W+ I+ E+E LLL G+FLVR S + G + LSV V H KI
Sbjct: 1 AEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSAFANAKGLNVAHYKI 60
Query: 57 Q--NTGDCYDLYGGEKFATLSELVQFYMENQGQLKKR 91
+ ++G Y + +F++L +LV +Y ++ L R
Sbjct: 61 RKLDSGGFY-ITSRTQFSSLQQLVAYYSKHADGLCHR 96
>pdb|1RQQ|C Chain C, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|D Chain D, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
Length = 114
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 21/109 (19%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG LS +A QL+L G +G F++R+S+++PG+ V
Sbjct: 13 WFHGTLSRVKAAQLVLAGGPR---------------------SHGLFVIRQSETRPGECV 51
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSG 220
L+ K H+ + F S+ ++ H+ +P+ SG
Sbjct: 52 LTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDMLRHFHTHPIPLESG 100
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERG--YDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQN 58
+S WFH ++S V+A L+L G G F++R S + PG+ L+ G+ H+++
Sbjct: 8 LSDYPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSL 67
Query: 59 TG 60
G
Sbjct: 68 NG 69
>pdb|1D4T|A Chain A, Crystal Structure Of The Xlp Protein Sap In Complex With
A Slam Peptide
pdb|1D4W|A Chain A, Crystal Structure Of The Xlp Protein Sap In Complex With
Slam Phosphopeptide
pdb|1D4W|B Chain B, Crystal Structure Of The Xlp Protein Sap In Complex With
Slam Phosphopeptide
pdb|1D1Z|A Chain A, Crystal Structure Of The Xlp Protein Sap
pdb|1D1Z|B Chain B, Crystal Structure Of The Xlp Protein Sap
pdb|1D1Z|C Chain C, Crystal Structure Of The Xlp Protein Sap
pdb|1D1Z|D Chain D, Crystal Structure Of The Xlp Protein Sap
pdb|1M27|A Chain A, Crystal Structure Of SapFYNSH3SLAM TERNARY COMPLEX
Length = 104
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNT 59
M + +H IS E LLL G DGS+L+R S S PG + L V +G + ++ T
Sbjct: 1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQT 59
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 113 FHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDF 170
+HG++S + E+L+L G +GS+L+R+S+S + + R SQ++ G +
Sbjct: 7 YHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSW 64
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 145 AEQLILQKGKNGSFLVRESQSKPGDFVLSV 174
E+L+L G +GS+L+R+S+S PG + L V
Sbjct: 16 GEKLLLATGLDGSYLLRDSESVPGVYCLCV 45
>pdb|3HCK|A Chain A, Nmr Ensemble Of The Uncomplexed Human Hck Sh2 Domain, 20
Structures
Length = 107
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSV-----RLNGEVTHI 54
M + WF IS +AE LL G GSF++R S + G ++LSV R V H
Sbjct: 1 METEEWFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHY 60
Query: 55 KIQ--NTGDCYDLYGGEKFATLSELVQFYME-NQGQLKK 90
KI+ + G Y + F+TL ELV Y + N G +K
Sbjct: 61 KIRTLDNGGFY-ISPRSTFSTLQELVDHYKKGNDGLCQK 98
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 36/114 (31%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
TE WF +S K+AE+ +L G GSF++R+S++ G
Sbjct: 3 TEEWFFKGISRKDAERQLLAPGN----------------------MLGSFMIRDSETTKG 40
Query: 169 DFVLSVRT-----DDKVTHVMIRCQAEKYDVGG-----GEQFDSLTQLIEHYKR 212
+ LSVR D V H IR D GG F +L +L++HYK+
Sbjct: 41 SYSLSVRDYDPRQGDTVKHYKIRT----LDNGGFYISPRSTFSTLQELVDHYKK 90
>pdb|1RPY|A Chain A, Crystal Structure Of The Dimeric Sh2 Domain Of Aps
pdb|1RPY|B Chain B, Crystal Structure Of The Dimeric Sh2 Domain Of Aps
Length = 114
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERG--YDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQN 58
+S WFH ++S V+A L+L G G F++R S + PG+ L+ G+ H+++
Sbjct: 8 LSDYPWFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSL 67
Query: 59 TG 60
G
Sbjct: 68 NG 69
Score = 40.0 bits (92), Expect = 0.003, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 21/109 (19%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
WFHG LS +A QL+L G +G F++R+S+++PG+ V
Sbjct: 13 WFHGTLSRVKAAQLVLAGGPR---------------------SHGLFVIRQSETRPGECV 51
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSG 220
L+ K H+ + F S+ + H+ +P+ SG
Sbjct: 52 LTFNFQGKAKHLRLSLNGHGQCHVQHLWFQSVFDXLRHFHTHPIPLESG 100
>pdb|1KA6|A Chain A, SapSH2D1A BOUND TO PEPTIDE N-Py
pdb|1KA7|A Chain A, SapSH2D1A BOUND TO PEPTIDE N-Y-C
Length = 128
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 7 FHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNT 59
+H IS E LLL G DGS+L+R S S PG + L V +G + ++ T
Sbjct: 7 YHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQT 59
Score = 34.3 bits (77), Expect = 0.13, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 113 FHGQLSGKEAEQLILQKGKNGSFLVRESQS 142
+HG++S + E+L+L G +GS+L+R+S+S
Sbjct: 7 YHGKISRETGEKLLLATGLDGSYLLRDSES 36
Score = 32.7 bits (73), Expect = 0.39, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 145 AEQLILQKGKNGSFLVRESQSKPGDFVLSV 174
E+L+L G +GS+L+R+S+S PG + L V
Sbjct: 16 GEKLLLATGLDGSYLLRDSESVPGVYCLCV 45
>pdb|1I3Z|A Chain A, Murine Eat2 Sh2 Domain In Complex With Slam
Phosphopeptide
Length = 103
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI 56
++H ++ E E LLL+ G DG+FL+R S S PG L V V +I
Sbjct: 5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRI 55
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 21/117 (17%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
++HG L+ +E E L+L+ G +G+FL+R+S+S + K + R + K G +
Sbjct: 5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYY- 63
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
+ TD + F +L +L+ Y + G VVHL P
Sbjct: 64 -RIETDAHTPRTI---------------FPNLQELVSKYGK----PGQGLVVHLSNP 100
>pdb|3CXL|A Chain A, Crystal Structure Of Human Chimerin 1 (Chn1)
Length = 463
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYD 64
R FH IS A+ LL+ +GS+L+R S+ PG +TL++R + + ++ G +
Sbjct: 52 REFHGMISREAADQLLIVA--EGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHF- 108
Query: 65 LYGGEKFATLSELV 78
G ++F ++ +LV
Sbjct: 109 -VGEKRFESIHDLV 121
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 64/148 (43%), Gaps = 42/148 (28%)
Query: 111 RWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDF 170
R FHG +S + A+QL++ GS+L+RESQ +PG +
Sbjct: 52 REFHGMISREAADQLLIVA-------------------------EGSYLIRESQRQPGTY 86
Query: 171 VLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV---VHLKQ 227
L++R + + + + + G ++F+S+ L+ T G + + K
Sbjct: 87 TLALRFGSQTRNFRLYYDGKHF--VGEKRFESIHDLV----------TDGLITLYIETKA 134
Query: 228 PFNATRITVSNIHDRV--TELQKENSSK 253
++T++ I++ V T L +E + K
Sbjct: 135 AEYIAKMTINPIYEHVGYTTLNREPAYK 162
>pdb|1OO3|A Chain A, P395s Mutant Of The P85 Regulatory Subunit Of The N-
Terminal Src Homology 2 Domain Of Pi3-Kinase
pdb|1OO4|A Chain A, P395s Mutant Of The P85 Regulatory Subunit Of The N-
Terminal Src Homology 2 Domain Of Pi3-Kinase Complexed
To A Peptide Derived From Pdgfr
Length = 111
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKP-GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQF 200
S+E L+ +G+FLVR++ +K GD+ L++R + I + KY F
Sbjct: 19 SREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDSLTF 78
Query: 201 DSLTQLIEHYKRNPMVE 217
+S+ +LI HY+ + +
Sbjct: 79 NSVVELINHYRNESLAQ 95
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNP-GDFTLSVRLNGEVTHIKIQNTGDCYD 64
W+ IS E L + DG+FLVR + + GD+TL++R G IKI + Y
Sbjct: 13 WYWGDISREEVNEKLRDTA-DGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYG 71
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
F ++ EL+ Y N+ + + ++L YP+S
Sbjct: 72 FSDSLTFNSVVELINHY-RNESLAQYNPKLDVKLLYPVS 109
>pdb|1RJA|A Chain A, Solution Structure And Backbone Dynamics Of The
Nonreceptor Tyrosine Kinase Ptk6BRK SH2 DOMAIN
Length = 100
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 3 SRRWFHPSISGVEA-EVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI-QNTG 60
S WF IS EA L E G+FL+R S D+ LSVR V H KI + G
Sbjct: 1 SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAG 60
Query: 61 DCYDLYGGEKFATLSELVQFY 81
L F +L ELV ++
Sbjct: 61 GRLHLNEAVSFLSLPELVNYH 81
Score = 36.6 bits (83), Expect = 0.027, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 140 SQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMI-RCQAEKYDVGGGE 198
S+S+ +L + G+FL+R S+ D+VLSVR V H I R + +
Sbjct: 10 SRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAV 69
Query: 199 QFDSLTQLIEHYK 211
F SL +L+ +++
Sbjct: 70 SFLSLPELVNYHR 82
>pdb|2BBU|A Chain A, Solution Structure Of Mouse Socs3 In Complex With A
Phosphopeptide From The Gp130 Receptor
Length = 164
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 148 LILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGG-------EQF 200
L+L G+FL+R+S + F LSV+T ++ I+C+ + + +F
Sbjct: 37 LLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRF 96
Query: 201 DSLTQLIEHYKRNP 214
D + +L+ HY P
Sbjct: 97 DCVLKLVHHYMPPP 110
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 10 SISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDLYGG- 68
+++G EA LLL G+FL+R S FTLSV+ +++IQ G + L
Sbjct: 29 AVTGGEAN-LLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDP 87
Query: 69 ------EKFATLSELVQFYMENQG 86
+F + +LV YM G
Sbjct: 88 RSTQPVPRFDCVLKLVHHYMPPPG 111
>pdb|1FU5|A Chain A, Nmr Structure Of The N-Sh2 Domain Of The P85 Subunit Of
Pi3- Kinase Complexed To A Doubly Phosphorylated Peptide
Derived From Polyomavirus Middle T Antigen
pdb|1FU6|A Chain A, Nmr Structure Of The N-Sh2 Domain Of The P85 Subunit Of
Pi3- Kinase
Length = 111
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKP-GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQF 200
S+E L+ +G+FLVR++ +K GD+ L++R + I + KY F
Sbjct: 19 SREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTF 78
Query: 201 DSLTQLIEHYKRNPMVE 217
+S+ +LI HY+ + +
Sbjct: 79 NSVVELINHYRNESLAQ 95
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNP-GDFTLSVRLNGEVTHIKIQNTGDCYD 64
W+ IS E L + DG+FLVR + + GD+TL++R G IKI + Y
Sbjct: 13 WYWGDISREEVNEKLRDTA-DGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYG 71
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
F ++ EL+ Y N+ + + ++L YP+S
Sbjct: 72 FSDPLTFNSVVELINHY-RNESLAQYNPKLDVKLLYPVS 109
>pdb|1XA6|A Chain A, Crystal Structure Of The Human Beta2-Chimaerin
Length = 466
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYD 64
R FH IS +A+ LL G +G++++R S+ PG +TL++R + + ++ + G +
Sbjct: 56 REFHGIISREQADELL--GGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHF- 112
Query: 65 LYGGEKFATLSELV 78
G ++F ++ +LV
Sbjct: 113 -VGEKRFESIHDLV 125
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 27/97 (27%)
Query: 111 RWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDF 170
R FHG +S ++A++L+ G G++++RESQ +PG +
Sbjct: 56 REFHGIISREQADELL-------------------------GGVEGAYILRESQRQPGCY 90
Query: 171 VLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLI 207
L++R ++ + + + + G ++F+S+ L+
Sbjct: 91 TLALRFGNQTLNYRLFHDGKHF--VGEKRFESIHDLV 125
>pdb|2IUG|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain
pdb|2IUH|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With C-Kit Phosphotyrosyl Peptide
pdb|2IUI|A Chain A, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With Pdgfr Phosphotyrosyl Peptide
pdb|2IUI|B Chain B, Crystal Structure Of The Pi3-Kinase P85 N-Terminal Sh2
Domain In Complex With Pdgfr Phosphotyrosyl Peptide
Length = 120
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNP-GDFTLSVRLNGEVTHIKIQNT 59
+ + W+ IS E L + DG+FLVR + + GD+TL++R G IKI +
Sbjct: 8 LQNAEWYWGDISREEVNEKLRDTA-DGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHR 66
Query: 60 GDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
Y F+++ EL+ Y N+ + + ++L YP+S
Sbjct: 67 DGKYGFSDPLTFSSVVELINHY-RNESLAQYNPKLDVKLLYPVS 109
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKP-GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQF 200
S+E L+ +G+FLVR++ +K GD+ L++R + I + KY F
Sbjct: 19 SREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTF 78
Query: 201 DSLTQLIEHYKRNPMVE 217
S+ +LI HY+ + +
Sbjct: 79 SSVVELINHYRNESLAQ 95
>pdb|3HHM|B Chain B, Crystal Structure Of P110alpha H1047r Mutant In Complex
With Nish2 Of P85alpha And The Drug Wortmannin
pdb|3HIZ|B Chain B, Crystal Structure Of P110alpha H1047r Mutant In Complex
With Nish2 Of P85alpha
Length = 373
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNP-GDFTLSVRLNGEVTHIKIQNT 59
+ + W+ IS E L + DG+FLVR + + GD+TL++R G IKI +
Sbjct: 7 LQNAEWYWGDISREEVNEKLRDTA-DGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHR 65
Query: 60 GDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
Y F+++ EL+ Y N+ + + ++L YP+S
Sbjct: 66 DGKYGFSDPLTFSSVVELINHY-RNESLAQYNPKLDVKLLYPVS 108
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 150 LQKGKNGSFLVRESQSKP-GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIE 208
L+ +G+FLVR++ +K GD+ L++R + I + KY F S+ +LI
Sbjct: 26 LRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELIN 85
Query: 209 HYKRNPMVE 217
HY+ + +
Sbjct: 86 HYRNESLAQ 94
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 137 VRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG 196
V S +AE L+ K ++G+FLVRES SK G + SV D +V H +I A Y G
Sbjct: 305 VGSSNRNKAENLLRGK-RDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGY--GF 360
Query: 197 GEQFDSLTQLIE 208
E ++ + L E
Sbjct: 361 AEPYNLYSSLKE 372
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 20 LLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCY 63
LL DG+FLVR S S G + SV ++GEV H I T Y
Sbjct: 316 LLRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGY 358
>pdb|2C9W|A Chain A, Crystal Structure Of Socs-2 In Complex With Elongin-B And
Elongin-C At 1.9a Resolution
Length = 169
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 133 GSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKY 192
GS V E++ K L++ G+FL+R+S +SV+T T++ I Q K+
Sbjct: 22 GSMTVNEAKEK------LKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKF 75
Query: 193 DVGG-------GEQFDSLTQLIEHY-------KRNPMVETSGTV-VHLKQPF 229
+ +QFDS+ LI++Y + P +GTV ++L +P
Sbjct: 76 RLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTVHLYLTKPL 127
>pdb|2PNA|A Chain A, Structure Of An Sh2 Domain Of The P85 Alpha Subunit Of
Phosphatidylinositol-3-Oh Kinase
pdb|2PNB|A Chain A, Structure Of An Sh2 Domain Of The P85 Alpha Subunit Of
Phosphatidylinositol-3-Oh Kinase
Length = 104
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKP-GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQF 200
S+E L+ +G+FLVR++ +K GD+ L++R + I + KY F
Sbjct: 12 SREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTF 71
Query: 201 DSLTQLIEHYKRNPMVE 217
+S+ +LI HY+ + +
Sbjct: 72 NSVVELINHYRNESLAQ 88
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNP-GDFTLSVRLNGEVTHIKIQNTGDCYD 64
W+ IS E L + DG+FLVR + + GD+TL++R G IKI + Y
Sbjct: 6 WYWGDISREEVNEKLRDTA-DGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYG 64
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
F ++ EL+ Y N+ + + ++L YP+S
Sbjct: 65 FSDPLTFNSVVELINHY-RNESLAQYNPKLDVKLLYPVS 102
>pdb|2EO6|A Chain A, Solution Structure Of The Sh2 Domain From Mouse B-Cell
Linker Protein Blnk
Length = 141
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 27/111 (24%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W+ G K AE+ + + K+GSFL+R+S +++Q +
Sbjct: 25 WYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQ---------------------PYT 63
Query: 172 LSVRTDDKVTHVMIRC--QAEKYDVG----GGEQFDSLTQLIEHYKRNPMV 216
L + +V ++ +R ++Y +G G E F S+ +++ ++ NP+V
Sbjct: 64 LVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLV 114
>pdb|2RD0|B Chain B, Structure Of A Human P110alpha/p85alpha Complex
pdb|4A55|B Chain B, Crystal Structure Of P110alpha In Complex With Ish2 Of
P85alpha And The Inhibitor Pik-108
Length = 279
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNP-GDFTLSVRLNGEVTHIKIQNTGDCYD 64
W+ IS E L + DG+FLVR + + GD+TL++R G IKI + Y
Sbjct: 12 WYWGDISREEVNEKLRDTA-DGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYG 70
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
F+++ EL+ Y N+ + + ++L YP+S
Sbjct: 71 FSDPLTFSSVVELINHY-RNESLAQYNPKLDVKLLYPVS 108
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 150 LQKGKNGSFLVRESQSKP-GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIE 208
L+ +G+FLVR++ +K GD+ L++R + I + KY F S+ +LI
Sbjct: 26 LRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELIN 85
Query: 209 HYKRNPMVE 217
HY+ + +
Sbjct: 86 HYRNESLAQ 94
>pdb|3QWX|X Chain X, Ced-2 1-174
Length = 174
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 156 GSFLVRESQSKPGDFVLSVRTDDK---VTHVMIRCQAEKYD--VGGG-----EQFDSLTQ 205
G+FL+R+S S+PG++ L+VR D+ V H +I K D G + F +
Sbjct: 36 GTFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPA 94
Query: 206 LIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSK 253
L+ H+K + E S + K T +R T+L E +
Sbjct: 95 LLNHFKMRVLTEASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGER 142
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 4 RRWFHPSISGVEAEVLLLERGYD-GSFLVRPSRSNPGDFTLSVR 46
R ++ P +S EA LL E G+FL+R S S PG+++L+VR
Sbjct: 12 RSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVR 54
>pdb|3QWY|A Chain A, Ced-2
pdb|3QWY|B Chain B, Ced-2
Length = 308
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 156 GSFLVRESQSKPGDFVLSVRTDDK---VTHVMIRCQAEKYD--VGGG-----EQFDSLTQ 205
G+FL+R+S S+PG++ L+VR D+ V H +I K D G + F +
Sbjct: 65 GTFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPA 123
Query: 206 LIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSK 253
L+ H+K + E S + K T +R T+L E +
Sbjct: 124 LLNHFKMRVLTEASLLAAYKKPIIEVVVGTFKFTGERETDLPFEQGER 171
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 4 RRWFHPSISGVEAEVLLLERGYD-GSFLVRPSRSNPGDFTLSVR 46
R ++ P +S EA LL E G+FL+R S S PG+++L+VR
Sbjct: 41 RSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVR 83
>pdb|2VIF|A Chain A, Crystal Structure Of Socs6 Sh2 Domain In Complex With A
C-Kit Phosphopeptide
Length = 141
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
++ + W+ I+ EAE L DGSFLVR S + +LS R +G+ H +I+++
Sbjct: 21 LAKQGWYWGPITRWEAEGKLANVP-DGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSN 79
Query: 61 DCYDLY---GGEKFATLSELVQFYM---ENQGQLKKRNQEVIELKYPLSCADPTT 109
+ Y E ++ +L++ + EN R++ YP+ +P +
Sbjct: 80 GRFSFYEQPDVEGHTSIVDLIEHSIGDSENGAFCYSRSRLPGSATYPVRLTNPVS 134
>pdb|2HMH|A Chain A, Crystal Structure Of Socs3 In Complex With Gp130(Ptyr757)
Phosphopeptide
Length = 152
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 10 SISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDLYGG- 68
+++G EA LLL G+FL+R S FTLSV+ +++IQ G + L
Sbjct: 40 AVTGGEAN-LLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDP 98
Query: 69 ------EKFATLSELVQFYMENQ---GQLKKRNQEVIE--LKYPLSCADPTT 109
+F + +LV YM Q G KR + K PL + P +
Sbjct: 99 RSTQPVPRFDXVLKLVHHYMPPQALPGSTPKRAYYIYSGGEKIPLVLSRPLS 150
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 148 LILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGG-------EQF 200
L+L G+FL+R+S + F LSV+T ++ I+ + + + +F
Sbjct: 48 LLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQPVPRF 107
Query: 201 DSLTQLIEHY 210
D + +L+ HY
Sbjct: 108 DXVLKLVHHY 117
>pdb|1OFW|A Chain A, Three Dimensional Structure Of The Oxidized Form Of Nine
Heme Cytochrome C At Ph 7.5
pdb|1OFW|B Chain B, Three Dimensional Structure Of The Oxidized Form Of Nine
Heme Cytochrome C At Ph 7.5
pdb|1OFY|A Chain A, Three Dimensional Structure Of The Reduced Form Of
Nine-Heme Cytochrome C At Ph 7.5
pdb|1OFY|B Chain B, Three Dimensional Structure Of The Reduced Form Of
Nine-Heme Cytochrome C At Ph 7.5
Length = 296
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 15/124 (12%)
Query: 150 LQKGKNGSFLVRESQSKPGDFVLSVRTDDKVT------HVMIRCQAEKYDVGGGEQFDSL 203
+QKG NG+ L ++++ + VL+ +T + V+ V+I A+KY+ L
Sbjct: 142 MQKGINGTLLPGDNEALAAETVLAQKTVEPVSPMLAPYKVVIDALADKYEPSNFTHRRHL 201
Query: 204 TQLIEHYKRNPMV-------ETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGF 256
T L+E K + + E H + P + T + H + E+ K N +
Sbjct: 202 TSLMERIKDDKLAQAFHNKPEILCATCHHRSPLSLTPPKCGSCHTK--EIDKANPGRPNL 259
Query: 257 WEEF 260
+
Sbjct: 260 MAAY 263
>pdb|2L6K|A Chain A, Solution Structure Of A Nonphosphorylated Peptide
Recognizing Domain
Length = 123
Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 SSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL 47
+S+ W+ P +S +A LL ++ G+FL+R S S G + L++++
Sbjct: 3 TSKFWYKPHLSRDQAIALLKDKD-PGAFLIRDSHSFQGAYGLALKV 47
>pdb|2KNO|A Chain A, Nmr Solution Structure Of Sh2 Domain Of The Human Tensin
Like C1 Domain Containing Phosphatase (Tenc1)
Length = 131
Score = 30.4 bits (67), Expect = 2.2, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 2 SSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL 47
+S+ W+ P +S +A LL ++ G+FL+R S S G + L++++
Sbjct: 18 TSKFWYKPHLSRDQAIALLKDKD-PGAFLIRDSHSFQGAYGLALKV 62
>pdb|1F52|A Chain A, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|B Chain B, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|C Chain C, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|D Chain D, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|E Chain E, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|F Chain F, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|G Chain G, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|H Chain H, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|I Chain I, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|J Chain J, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|K Chain K, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F52|L Chain L, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium Co-Crystallized With Adp
pdb|1F1H|A Chain A, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|B Chain B, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|C Chain C, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|D Chain D, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|E Chain E, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|F Chain F, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|G Chain G, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|H Chain H, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|I Chain I, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|J Chain J, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|K Chain K, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1F1H|L Chain L, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Thallium Ions
pdb|1FPY|A Chain A, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|B Chain B, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|C Chain C, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|D Chain D, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|E Chain E, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|F Chain F, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|G Chain G, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|H Chain H, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|I Chain I, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|J Chain J, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|K Chain K, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1FPY|L Chain L, Crystal Structure Of Glutamine Synthetase From Salmonella
Typhimurium With Inhibitor Phosphinothricin
pdb|1LGR|A Chain A, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|B Chain B, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|C Chain C, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|D Chain D, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|E Chain E, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|F Chain F, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|G Chain G, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|H Chain H, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|I Chain I, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|J Chain J, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|K Chain K, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|1LGR|L Chain L, Interactions Of Nucleotides With Fully Unadenylylated
Glutamine Synthetase From Salmonella Typhimurium
pdb|2LGS|A Chain A, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|B Chain B, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|C Chain C, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|D Chain D, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|E Chain E, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|F Chain F, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|G Chain G, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|H Chain H, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|I Chain I, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|J Chain J, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|K Chain K, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
pdb|2LGS|L Chain L, Feedback Inhibition Of Fully Unadenylylated Glutamine
Synthetase From Salmonella Typhimurium By Glycine,
Alanine, And Serine
Length = 468
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 48 NGEVTHIKIQNTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADP 107
NG H + + +L+ G+K+A LSE +Y+ G + K + + L A+P
Sbjct: 264 NGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYI---GGVIKHAKAINAL------ANP 314
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVR 138
TT + + G EA ++ +N S +R
Sbjct: 315 TTNSY-KRLVPGYEAPVMLAYSARNRSASIR 344
>pdb|2GLS|A Chain A, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|B Chain B, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|C Chain C, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|D Chain D, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|E Chain E, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|F Chain F, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|G Chain G, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|H Chain H, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|I Chain I, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|J Chain J, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|K Chain K, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
pdb|2GLS|L Chain L, Refined Atomic Model Of Glutamine Synthetase At 3.5
Angstroms Resolution
Length = 469
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 48 NGEVTHIKIQNTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADP 107
NG H + + +L+ G+K+A LSE +Y+ G + K + + L A+P
Sbjct: 265 NGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYI---GGVIKHAKAINAL------ANP 315
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVR 138
TT + + G EA ++ +N S +R
Sbjct: 316 TTNSY-KRLVPGYEAPVMLAYSARNRSASIR 345
>pdb|2D7O|A Chain A, Solution Structure Of The 17th Filamin Domain From Human
Filamin C
Length = 111
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 114 HGQLSGKEAEQLILQK--GKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
HG ++ K A I+ K G+ G L E SK ++ + K+G+ V + PGD+
Sbjct: 23 HGMVN-KPATFTIVTKDAGEGGLSLAVEGPSKA--EITCKDNKDGTCTVSYLPTAPGDYS 79
Query: 172 LSVRTDDK 179
+ VR DDK
Sbjct: 80 IIVRFDDK 87
>pdb|2KRG|A Chain A, Solution Structure Of Human Sodium HYDROGEN EXCHANGE
Regulatory Factor 1(150-358)
Length = 216
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 150 LQKGKNG-SFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG 196
++KG +G F + +SKPG F+ SV D +R Q +V G
Sbjct: 15 MKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNG 62
>pdb|1G7D|A Chain A, Nmr Structure Of Erp29 C-Domain
Length = 106
Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 116 QLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGK 154
+ S +EA Q IL++G++G V+E+ K A Q + GK
Sbjct: 16 EASSREARQAILKQGQDGLSGVKETDKKWASQYLKIMGK 54
>pdb|2IZV|A Chain A, Crystal Structure Of Socs-4 In Complex With Elongin-B And
Elongin-C At 2.55a Resolution
Length = 187
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 143 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIR--CQAEKYDVGGGEQF 200
K A + +L+ G+FL+R+S + F +S R + H I +D F
Sbjct: 43 KYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVF 102
Query: 201 DS--LTQLIEHYK 211
S +T L+EHYK
Sbjct: 103 HSPDITGLLEHYK 115
>pdb|2QC7|A Chain A, Crystal Structure Of The Protein-disulfide Isomerase
Related Chaperone Erp29
pdb|2QC7|B Chain B, Crystal Structure Of The Protein-disulfide Isomerase
Related Chaperone Erp29
Length = 240
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 118 SGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGK 154
SG EA Q +L++G++ V+E+Q K AEQ + GK
Sbjct: 141 SGVEARQALLKQGQDNLSSVKETQKKWAEQYLKIMGK 177
>pdb|2JXO|A Chain A, Structure Of The Second Pdz Domain Of Nherf-1
Length = 98
Score = 28.1 bits (61), Expect = 9.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 150 LQKGKNG-SFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG 196
++KG +G F + +SKPG F+ SV D +R Q +V G
Sbjct: 15 MKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNG 62
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,452,127
Number of Sequences: 62578
Number of extensions: 620138
Number of successful extensions: 2478
Number of sequences better than 100.0: 264
Number of HSP's better than 100.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1528
Number of HSP's gapped (non-prelim): 513
length of query: 451
length of database: 14,973,337
effective HSP length: 102
effective length of query: 349
effective length of database: 8,590,381
effective search space: 2998042969
effective search space used: 2998042969
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)