RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8516
(451 letters)
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 636 bits (1642), Expect = 0.0
Identities = 298/470 (63%), Positives = 348/470 (74%), Gaps = 47/470 (10%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M SRRWFHP+I+GVEAE LLL RG DGSFL RPS+SNPGD TLSVR NG VTHIKIQNTG
Sbjct: 1 MKSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTG 60
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGK 120
D YDLYGGEKFATL+ELVQ+YME+ GQLK++N +VIELKYPL+CADPT+ERWFHG LSG
Sbjct: 61 DYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSG- 119
Query: 121 EAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDD-- 178
KEAE+L+ +KGK+GSFLVRESQS PGDFVLSVRT D
Sbjct: 120 ----------------------KEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDK 157
Query: 179 --------KVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 230
KVTHVMIRCQ KYDVGGGE+FDSLT L+EHYK+NPMVET GTV+ LKQP N
Sbjct: 158 GESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLN 217
Query: 231 ATRITVSNIHDRVTELQKE----NSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKN 286
TRI + I RV EL K + K GFWEEFE+LQQQE + L++R+EGQ+ +N+NKN
Sbjct: 218 TTRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKN 277
Query: 287 RYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSE--------DGGKSYIATQGCLPST 338
RYKNILPFDHTRV L D D + P ++YINAN I E KSYIATQGCL +T
Sbjct: 278 RYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNT 337
Query: 339 MNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYI 398
+NDFW MV+QEN RVIVMTTKE+ERGK+KC KYWPD++ K YG + V N+ ES DY
Sbjct: 338 VNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYT 397
Query: 399 LREFLVSKGS--ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
LRE +SK + R ++ YHF+ WPDHGVPSDPG VL+FL EV+ +Q+
Sbjct: 398 LRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQE 447
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 562 bits (1449), Expect = 0.0
Identities = 240/462 (51%), Positives = 319/462 (69%), Gaps = 43/462 (9%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYD 64
RWFH +SG++AE LL RG GSFL RPSR N GDF+LSVR+ +VTHI+IQN+GD YD
Sbjct: 3 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 62
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQ 124
LYGGEKFATL+ELV++Y + QG L+ R+ +I LKYPL+C+DPT+ERW+HG +S
Sbjct: 63 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMS------ 116
Query: 125 LILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDK----- 179
+AE L+ KG+ +FLVRES S+PGDFVLSV +D
Sbjct: 117 -----------------GGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPG 159
Query: 180 ----VTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRIT 235
VTH+ + C+ +Y VGG E FDSLT L+EH+K+ + E SG V+L+QP+ ATR+
Sbjct: 160 SPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVN 219
Query: 236 VSNIHDRVTELQKENSSKA----GFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNI 291
++I +RV EL K+ S+ GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNI
Sbjct: 220 AADIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNI 279
Query: 292 LPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-----KSYIATQGCLPSTMNDFWSMV 346
LPFDH+RV L+ D ++PG++YINANYI+++ G K+YIA+QGCL +T+NDFW M
Sbjct: 280 LPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMA 339
Query: 347 WQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS- 405
WQEN RVIVMTT+E+E+G+NKC YWP+ + YG V N E TT+Y LR VS
Sbjct: 340 WQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSP 399
Query: 406 -KGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ R+I+HY + +WPDHGVPS+PG VL+FL ++N RQ+
Sbjct: 400 LDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQE 441
Score = 62.2 bits (151), Expect = 1e-10
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 4 RRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLN---------GEVTHI 54
RW+H +SG +AE LL +G +FLVR S S PGDF LSV + VTHI
Sbjct: 108 ERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHI 167
Query: 55 KIQNTGDCYDLYGGEKFATLSELVQFYMEN 84
K+ G Y + G E F +L++LV+ + +
Sbjct: 168 KVMCEGGRYTVGGLETFDSLTDLVEHFKKT 197
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 554 bits (1428), Expect = 0.0
Identities = 240/462 (51%), Positives = 319/462 (69%), Gaps = 43/462 (9%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYD 64
RWFH +SG++AE LL RG GSFL RPSR N GDF+LSVR+ +VTHI+IQN+GD YD
Sbjct: 3 RWFHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYD 62
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQ 124
LYGGEKFATL+ELV++Y + QG L+ R+ +I LKYPL+C+DPT+ERW+HG +S
Sbjct: 63 LYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHMS------ 116
Query: 125 LILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDK----- 179
+AE L+ KG+ +FLVRES S+PGDFVLSV +D
Sbjct: 117 -----------------GGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPG 159
Query: 180 ----VTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRIT 235
VTH+ + C+ +Y VGG E FDSLT L+EH+K+ + E SG V+L+QP+ ATR+
Sbjct: 160 SPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVN 219
Query: 236 VSNIHDRVTELQKENSSKA----GFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNI 291
++I +RV EL K+ S+ GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNI
Sbjct: 220 AADIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNI 279
Query: 292 LPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-----KSYIATQGCLPSTMNDFWSMV 346
LPFDH+RV L+ D ++PG++YINANYI+++ G K+YIA+QGCL +T+NDFW M
Sbjct: 280 LPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMA 339
Query: 347 WQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS- 405
WQEN RVIVMTT+E+E+G+NKC YWP+ + YG V N E TT+Y LR VS
Sbjct: 340 WQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSP 399
Query: 406 -KGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ R+I+HY + +WPDHGVPS+PG VL+FL ++N RQ+
Sbjct: 400 LDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQE 441
Score = 59.9 bits (145), Expect = 8e-10
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 4 RRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLN---------GEVTHI 54
RW+H +SG +AE LL +G +FLVR S S PGDF LSV + VTHI
Sbjct: 108 ERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHI 167
Query: 55 KIQNTGDCYDLYGGEKFATLSELVQFYMEN 84
K+ G Y + G E F +L++LV+ + +
Sbjct: 168 KVMCEGGRYTVGGLETFDSLTDLVEHFKKT 197
Score = 29.9 bits (67), Expect = 2.2
Identities = 8/64 (12%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 239 IHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTR 298
I +L+ S+ G E+ ++ + + + +++K L + R
Sbjct: 516 IETTKKKLE-VLQSQKGQESEYGNITYPPAMKN-AHAKASRTSSKHKEDVYENLHTKNKR 573
Query: 299 VKLK 302
+
Sbjct: 574 EEKV 577
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 326 bits (839), Expect = e-110
Identities = 122/234 (52%), Positives = 160/234 (68%), Gaps = 11/234 (4%)
Query: 229 FNATRITVSNIHDRVTEL-QKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNR 287
+++ + + + + + + K GFWEEFE+LQQQE + L++R+EGQ+ +N+NKNR
Sbjct: 6 HHSSGVDLGTENLYFQSMAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNR 65
Query: 288 YKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG--------KSYIATQGCLPSTM 339
YKNILPFDHTRV L D D + P ++YINAN I E KSYIATQGCL +T+
Sbjct: 66 YKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTV 125
Query: 340 NDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYIL 399
NDFW MV+QEN RVIVMTTKE+ERGK+KC KYWPD++ K YG + V N+ ES DY L
Sbjct: 126 NDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTL 185
Query: 400 REFLVSKGS--ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAGN 451
RE +SK + R ++ YHF+ WPDHGVPSDPG VL+FL EV+ +Q+
Sbjct: 186 RELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDA 239
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 326 bits (837), Expect = e-110
Identities = 73/246 (29%), Positives = 123/246 (50%), Gaps = 14/246 (5%)
Query: 206 LIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQ 265
+ H+ + V+ ++ + +ATR+ + +R L+K+ + E+E + +
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMVDATRVP---MDERFRTLKKKLEE-GMVFTEYEQIPK 56
Query: 266 QESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG 325
+++ +F+ +N ++R + ++P++ RV+L E YINA++I+ GG
Sbjct: 57 KKANGIFS--TAALPENAERSRIREVVPYEENRVELIPTKE--NNTGYINASHIKVVVGG 112
Query: 326 --KSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPD---DHQSKT 380
YIATQG LP T +DFW MVW++ V VI M T E E G+ K +YWP H S T
Sbjct: 113 AEWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYWPKLGSKHSSAT 172
Query: 381 YGAVCVNNMYESVTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLY 439
YG V + + + Y V S R ++H + WPDHG P D L++L
Sbjct: 173 YGKFKVTTKFRTDSVCYATTGLKVKHLLSGQERTVWHLQYTDWPDHGCPEDVQGFLSYLE 232
Query: 440 EVNTRQ 445
E+ + +
Sbjct: 233 EIQSVR 238
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 311 bits (799), Expect = e-104
Identities = 111/199 (55%), Positives = 147/199 (73%), Gaps = 7/199 (3%)
Query: 255 GFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYI 314
GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNILPFDH+RV L+ D ++PG++YI
Sbjct: 1 GFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYI 60
Query: 315 NANYIQSEDGG-----KSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCA 369
NANYI+++ G K+YIA+QGCL +T+NDFW M WQEN RVIVMTT+E+E+G+NKC
Sbjct: 61 NANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCV 120
Query: 370 KYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--KGSESPRKIYHYHFQAWPDHGV 427
YWP+ + YG V N E TT+Y LR VS + R+I+HY + +WPDHGV
Sbjct: 121 PYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGV 180
Query: 428 PSDPGCVLNFLYEVNTRQD 446
PS+PG VL+FL ++N RQ+
Sbjct: 181 PSEPGGVLSFLDQINQRQE 199
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 311 bits (798), Expect = e-104
Identities = 84/232 (36%), Positives = 123/232 (53%), Gaps = 6/232 (2%)
Query: 219 SGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQ 278
S +V + I + N + + S F EEFE L+
Sbjct: 11 SSGLVPRGSHMASRPILIKNFAEHYRLMSA--DSDFRFSEEFEELKHVG--RDQPCTFAD 66
Query: 279 KLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPST 338
NR KNR+ NILP+DH+R KL+ VD+D G++YINANY+ + + +I TQG L ST
Sbjct: 67 LPCNRPKNRFTNILPYDHSRFKLQPVDDD-EGSDYINANYVPGHNSPREFIVTQGPLHST 125
Query: 339 MNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYI 398
+DFW M W+ N R IVM T+ E+G+ KC +YWP+D YG + V + +S D++
Sbjct: 126 RDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWV 185
Query: 399 LREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
+ EF++ +GSE R + H+HF WPD GVP+ P ++ F+ R
Sbjct: 186 MTEFMLCRGSEQ-RILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQR 236
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 309 bits (794), Expect = e-104
Identities = 85/218 (38%), Positives = 130/218 (59%), Gaps = 9/218 (4%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V+++ +T++++ GF EE+E+L + ++ + ++ +NRNKNRY NI+
Sbjct: 4 IRVADLLQHITQMKR--GQGYGFKEEYEALPEGQT---ASWDTAKEDENRNKNRYGNIIS 58
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+DH+RV+L +D D P ++YINANYI + YIATQG + T+ DFW M+WQEN
Sbjct: 59 YDHSRVRLLVLDGD-PHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSAS 117
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPR 412
IVM T +E G+ KC +YWPDD ++ YG + V + +Y++R F V K G R
Sbjct: 118 IVMVTNLVEVGRVKCVRYWPDD--TEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIR 175
Query: 413 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
++ +HF +WPDHGVP +L F+ +V AG
Sbjct: 176 ELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAG 213
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 309 bits (795), Expect = e-103
Identities = 77/233 (33%), Positives = 124/233 (53%), Gaps = 15/233 (6%)
Query: 232 TRITVSNIHDRVTEL-QKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKN 290
+ ++ V + + ++++ GF E+FE +Q+ + T +N++KNRY N
Sbjct: 16 ENLYFQSMKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYIN 75
Query: 291 ILPFDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQE 349
IL +DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW M+W++
Sbjct: 76 ILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQ 135
Query: 350 NVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK--- 406
N +IVM T +E+G+ KC +YWP + S+ YG + V + Y +R F +
Sbjct: 136 NTGIIVMITNLVEKGRRKCDQYWPTE-NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKV 194
Query: 407 ---------GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
G ++ R + YH+ WPD GVP VL F+ + + G
Sbjct: 195 KKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETG 247
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 307 bits (789), Expect = e-103
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 8/219 (3%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
+ + + + ++ K S F +FE L+ NR KNRY NILP
Sbjct: 5 VQLDDFDAYIKDMAK--DSDYKFSLQFEELKLIG--LDIPHFAADLPLNRCKNRYTNILP 60
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+D +RV+L ++E+ GA+YINANYI + + YIATQG LP T NDFW MV Q+ ++
Sbjct: 61 YDFSRVRLVSMNEE-EGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQI 119
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSESPRK 413
IVM T+ E+ + KC YWP + YG + V + E D+ R F ++ E +
Sbjct: 120 IVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEEEQDDWACRHFRINYADEM-QD 178
Query: 414 IYHYHFQAWPDHGVPS--DPGCVLNFLYEVNTRQDIHAG 450
+ H+++ AWPDHGVP+ +L F++ V + G
Sbjct: 179 VMHFNYTAWPDHGVPTANAAESILQFVHMVRQQATKSKG 217
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 307 bits (788), Expect = e-102
Identities = 74/230 (32%), Positives = 116/230 (50%), Gaps = 11/230 (4%)
Query: 228 PFNATR--ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLD 281
P + + + +R+ A EF +Q + + + G + +
Sbjct: 2 PLGSPGIPDSARSFLERLEARGGRE--GAVLAGEFSDIQACSAAWKADGVCSTVAGSRPE 59
Query: 282 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMND 341
N KNRYK++LP+D TRV L + E+ ++YIN N+I+ DG +YIATQG LP T+ D
Sbjct: 60 NVRKNRYKDVLPYDQTRVILSLLQEE-GHSDYINGNFIRGVDGSLAYIATQGPLPHTLLD 118
Query: 342 FWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTT-DYILR 400
FW +VW+ V+VI+M +E+E G+ +C +YW + + G C+ + E D +LR
Sbjct: 119 FWRLVWEFGVKVILMACREIENGRKRCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLR 178
Query: 401 EFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
V+ ES R +Y + +WPD GVPS P +L + E Q
Sbjct: 179 TLKVTFQKES-RSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGPE 227
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 308 bits (791), Expect = e-102
Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 9/237 (3%)
Query: 211 KRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRH 270
KR + + +P + I V N + Q ++ GF EE+E L+
Sbjct: 4 KRKDAKNNEVSFSQI-KPKKSKLIRVENFEAYFKKQQADS--NCGFAEEYEDLKLIGIS- 59
Query: 271 LFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIA 330
+ + +NR KNRY N+LP+D +RVKL + +YINANY+ K +IA
Sbjct: 60 -LPKYAAEIAENRGKNRYNNVLPYDISRVKLSV--QTHSTDDYINANYMPGYHSKKDFIA 116
Query: 331 TQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMY 390
TQG LP+T+ DFW MVW++NV IVM TK +E+G+ KC +YWP Q++ YG + V
Sbjct: 117 TQGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSK-QAQDYGDITVAMTS 175
Query: 391 ESVTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
E V ++ +R+F+V S + +HF +WPDHGVP ++NF Y V
Sbjct: 176 EVVLPEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMK 232
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 306 bits (787), Expect = e-102
Identities = 80/217 (36%), Positives = 124/217 (57%), Gaps = 7/217 (3%)
Query: 239 IHDRVTELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLDNRNKNRYKNILPF 294
+ + E Q + +K F EF L++Q +++ + +K N KNRYK+ILP+
Sbjct: 7 LQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPY 66
Query: 295 DHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVI 354
D++RV+L + D + YINAN+I+ G K+YIATQG L +T+ DFW M+W+ +V +I
Sbjct: 67 DYSRVELSLITSD-EDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLII 125
Query: 355 VMTTKEMERGKNKCAKYWPDDHQ-SKTYGAVCVNNMYESVTTDYILREFLVSKGSESPRK 413
VM E E GK KC +YW + + +G V+ E +DYI+R V SE+ R
Sbjct: 126 VMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSET-RT 184
Query: 414 IYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
IY +H++ WPDH VPS +L +++V Q+ +
Sbjct: 185 IYQFHYKNWPDHDVPSSIDPILELIWDVRCYQEDDSV 221
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 304 bits (781), Expect = e-101
Identities = 81/222 (36%), Positives = 118/222 (53%), Gaps = 11/222 (4%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
+ V + + + +++ F EEF +L + T K +N+ KNRY NILP
Sbjct: 11 LPVDKLEEEINRRMADDN--KLFREEFNALPACPIQ--ATCEAASKEENKEKNRYVNILP 66
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+DH+RV L V+ P ++YINA++I +IA QG T+NDFW M+W++N
Sbjct: 67 YDHSRVHLTPVEGV-PDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTAT 125
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-----GS 408
IVM T ER + KCA+YWPD TYG V V+ +V DY +R+F + +
Sbjct: 126 IVMVTNLKERKECKCAQYWPDQ-GCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVGDVTNR 184
Query: 409 ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
+ R I +HF +WPD GVP P +L FL +V +AG
Sbjct: 185 KPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNPQYAG 226
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 302 bits (776), Expect = e-101
Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 12/220 (5%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I ++ +LQ ++ +E+E L+ + +NR KNRY NILP
Sbjct: 9 IKINQFEGHFMKLQADS--NYLLSKEYEELKDVG--RNQSCDIALLPENRGKNRYNNILP 64
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+D TRVKL G++YINA+YI + + YI TQG LP T +DFW MVW++NV
Sbjct: 65 YDATRVKLS------GGSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHN 118
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--KGSESP 411
IVM T+ +E+G+ KC YWP D S YG + + + ESV ++ +REF + + ++
Sbjct: 119 IVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFKICGEEQLDAH 178
Query: 412 RKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAGN 451
R I H+H+ WPDHGVP ++ F+ V + G
Sbjct: 179 RLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGA 218
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 303 bits (777), Expect = e-101
Identities = 75/245 (30%), Positives = 119/245 (48%), Gaps = 15/245 (6%)
Query: 208 EHYKRNPMV-ETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQ 266
+ K + + V+ + + + + T +N+ + L+ + +E E+LQ
Sbjct: 3 DSDKDHSFLTNDELAVLPVVKVLPSGKYTGANLKSVIRVLRG-LLDQGIPSKELENLQ-- 59
Query: 267 ESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGK 326
E + L GQ +NR KNRYKNILP+D TRV L YINA++I+ G +
Sbjct: 60 ELKPLDQCLIGQTKENRRKNRYKNILPYDATRVPLG------DEGGYINASFIKIPVGKE 113
Query: 327 S--YIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDH--QSKTYG 382
YIA QG LP+T+ DFW M+W++ VI M T+E+E K KC +YWP+ +
Sbjct: 114 EFVYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNILGKTTMVSN 173
Query: 383 AVCVNNMYESVTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 441
+ + + +++R + + R I H +F AWPDH PS P +L F+ +
Sbjct: 174 RLRLALVRMQQLKGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPSQPDDLLTFISYM 233
Query: 442 NTRQD 446
Sbjct: 234 RHIHR 238
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 312 bits (800), Expect = e-100
Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 8/228 (3%)
Query: 226 KQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNK 285
KQ N I + + + F EF+S+ + S+ F +E +K N+NK
Sbjct: 2 KQLMNVEPIHADILLETYKRKIADEG--RPFLAEFQSIPRVFSK--FPIKEARKPFNQNK 57
Query: 286 NRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSM 345
NRY +ILP+D+ RV+L +++ D G+ YINA+YI + YIA QG T++DFW M
Sbjct: 58 NRYVDILPYDYNRVELSEINGD-AGSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRM 116
Query: 346 VWQENVRVIVMTTKEMERGKNKCAKYWPD-DHQSKTYGAVCVNNMYESVTTDYILREFLV 404
+W++ VIVM T+ E +NKCA+YWP + ++ +G V V DYI+++ +
Sbjct: 117 IWEQKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRAFGDVVVKINQHKRCPDYIIQKLNI 176
Query: 405 S--KGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
K + R++ H F +WPDHGVP DP +L VN + +G
Sbjct: 177 VNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFSG 224
Score = 258 bits (660), Expect = 7e-80
Identities = 67/259 (25%), Positives = 115/259 (44%), Gaps = 27/259 (10%)
Query: 212 RNPMVETSG------TVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQ 265
R MV+ + F T + +S +H + ++K + E E +
Sbjct: 269 RCLMVQVEAQYILIHQALVEYNQFGETEVNLSELHPYLHNMKKRDPPSEPSPLEAEFQRL 328
Query: 266 QESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDE------------------D 307
R T+ G + +N++KNR N++P+D+ RV LK E
Sbjct: 329 PSYRSWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDS 388
Query: 308 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 367
++YINA++I S + IA QG L T+ DFW M++Q V+VIVM T+ +
Sbjct: 389 EEPSKYINASFIMSYWKPEVMIAAQGPLKETIGDFWQMIFQRKVKVIVMLTELKHGDQEI 448
Query: 368 CAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSES-PRKIYHYHFQAWPDHG 426
CA+YW + +TYG + V+ ++ Y LR F + R +Y Y + W
Sbjct: 449 CAQYWGEG--KQTYGDIEVDLKDTDKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQ 506
Query: 427 VPSDPGCVLNFLYEVNTRQ 445
+P++P +++ + V +
Sbjct: 507 LPAEPKELISMIQVVKQKL 525
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 300 bits (770), Expect = 1e-99
Identities = 75/239 (31%), Positives = 112/239 (46%), Gaps = 14/239 (5%)
Query: 217 ETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRRE 276
E + K P ++ ++ + + +L E +F+ L +++ T
Sbjct: 9 EPDFQYIPEKAPLDSVHQDDHSLRESMIQL-AEGLITGTVLTQFDQLYRKK--PGMTMSC 65
Query: 277 GQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG----KSYIATQ 332
+ N +KNRY++I P+D TRV LK +YINANYI E YIA Q
Sbjct: 66 AKLPQNISKNRYRDISPYDATRVILK------GNEDYINANYINMEIPSSSIINQYIACQ 119
Query: 333 GCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYES 392
G LP T DFW M W++ ++VM T ++ERG+ KC +YWP+ S +YG V E
Sbjct: 120 GPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEE 179
Query: 393 VTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
T YI R+ + R + + AWPDHGVP D L+F+ V ++
Sbjct: 180 GNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEE 238
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 299 bits (768), Expect = 2e-99
Identities = 73/226 (32%), Positives = 111/226 (49%), Gaps = 13/226 (5%)
Query: 223 VHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDN 282
VH+ P +T+ + D V K G +EE+E ++++ + T N
Sbjct: 3 VHVPGP---HAMTIQELVDYV-----NARQKQGIYEEYEDIRREN--PVGTFHCSMSPGN 52
Query: 283 RNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDF 342
KNRY ++ D TRVKL +YINA+++ +YI TQG L +T DF
Sbjct: 53 LEKNRYGDVPCLDQTRVKLTKRSGH-TQTDYINASFMDGYKQKNAYIGTQGPLENTYRDF 111
Query: 343 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD-HQSKTYGAVCVNNMYESVTTDYILRE 401
W MVW++ V VIVMTT+ E G+ KC +YWP + +G + V N+ Y
Sbjct: 112 WLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTT 171
Query: 402 FLVSKGSES-PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ E R++ H+ F +WPD+GVPS +++FL V +Q
Sbjct: 172 LEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQS 217
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 297 bits (762), Expect = 8e-99
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 6/222 (2%)
Query: 232 TRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNI 291
+ +S H + ++ ++ +E+++L ++ T Q N KNR+ +
Sbjct: 7 ANMDISTGHMILAYMEDHLRNRDRLAKEWQALCAYQAEP-NTCATAQGEGNIKKNRHPDF 65
Query: 292 LPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDFWSMVWQEN 350
LP+DH R+KLK ++YINA+ I D +YIATQG L T+ DFW MVW+
Sbjct: 66 LPYDHARIKLKVESSP-SRSDYINASPIIEHDPRMPAYIATQGPLSHTIADFWQMVWESG 124
Query: 351 VRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESV-TTDYILREFLVSK-GS 408
VIVM T +E G +C +YWPD+ + Y VN + E + D+++R F + +
Sbjct: 125 CTVIVMLTPLVEDGVKQCDRYWPDE-GASLYHVYEVNLVSEHIWCEDFLVRSFYLKNVQT 183
Query: 409 ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
+ R + +HF +WP G P+ +L+F +VN +
Sbjct: 184 QETRTLTQFHFLSWPAEGTPASTRPLLDFRRKVNKCYRGRSC 225
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 296 bits (759), Expect = 1e-98
Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 14/215 (6%)
Query: 236 VSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFD 295
+ + + +L K+ +FE L +++ + N +KNRYK++LP+D
Sbjct: 1 MDTLEGSMAQL-KKGLESGTVLIQFEQLYRKK--PGLAITFAKLPQNLDKNRYKDVLPYD 57
Query: 296 HTRVKLKDVDEDVPGAEYINANYIQSEDGG----KSYIATQGCLPSTMNDFWSMVWQENV 351
TRV L+ +YINA+Y+ E YIATQG LP T FW +VW + +
Sbjct: 58 TTRVLLQ------GNEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKL 111
Query: 352 RVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSES- 410
+IVM T ERG+ KC +YWPD +G + E T Y+ RE LV+
Sbjct: 112 SLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGE 171
Query: 411 PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQ 445
+ H + AWPDHGVP D L F+ V + +
Sbjct: 172 EHTVTHLQYVAWPDHGVPDDSSDFLEFVNYVRSLR 206
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 305 bits (783), Expect = 7e-98
Identities = 80/230 (34%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V + EL +++ GF E+FE +Q+ + T +N++KNRY NIL
Sbjct: 3 IPVKQFVKHIGELYS--NNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILA 60
Query: 294 FDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVR 352
+DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW M+W++N
Sbjct: 61 YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTG 120
Query: 353 VIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK------ 406
+IVM T +E+G+ KC +YWP + S+ YG + V + Y +R F +
Sbjct: 121 IIVMITNLVEKGRRKCDQYWPTE-NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKG 179
Query: 407 ------GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
G ++ R + YH+ WPD GVP VL F+ + + G
Sbjct: 180 QKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETG 229
Score = 247 bits (633), Expect = 1e-75
Identities = 57/277 (20%), Positives = 102/277 (36%), Gaps = 32/277 (11%)
Query: 201 DSLTQLIEHYK--------------RNPMVETSG-------TVVHLKQPFNATRITVSNI 239
DS+ Q I+ RN +V+T ++ +
Sbjct: 249 DSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLH 308
Query: 240 HDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRV 299
+ L K ++F+ + Q ++++ QK N+ KNR +++P + RV
Sbjct: 309 SYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECF-SAQKECNKEKNRNSSVVPSERARV 367
Query: 300 KLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTK 359
L + G +YINA+YI +I TQ LP T DFW M+W N ++IVM
Sbjct: 368 GLAPLPGM-KGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPD 426
Query: 360 EMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESV-----TTDYILREFLVSKGSES-PRK 413
+++ YWP +S A V + + I+ +F++ + +
Sbjct: 427 NQSLAEDEF-VYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLE 485
Query: 414 IYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
+ H+ WP+ P + + G
Sbjct: 486 VRHFQCPKWPNPDAPISS--TFELINVIKEEALTRDG 520
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 294 bits (755), Expect = 9e-98
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 242 RVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKL 301
++L+ +S EF + +E + KNRYK ILP +RV L
Sbjct: 20 TRSQLRDVVASSHLLQSEFMEIPMNF----VDPKEIDIPRHGTKNRYKTILPNPLSRVCL 75
Query: 302 KDVDEDVPGAEYINANYIQSEDG-GKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKE 360
+ + + YINANYI+ G K++IATQG + +T+NDFW MVWQE+ VIVM TK
Sbjct: 76 RPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDFWQMVWQEDSPVIVMITKL 135
Query: 361 MERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHFQ 420
E+ + KC YWP+ YG V V + +Y +R ++ +GS + + + HY +
Sbjct: 136 KEKNE-KCVLYWPEK--RGIYGKVEVLVTGVTECDNYTIRNLVLKQGSHT-QHVKHYWYT 191
Query: 421 AWPDHGVPSDPGCVLNFLYEVNTRQ 445
+WPDH P +L + +V +
Sbjct: 192 SWPDHKTPDSAQPLLQLMLDVEEDR 216
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 290 bits (745), Expect = 4e-96
Identities = 75/218 (34%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 232 TRITVSNIHDRVT--ELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYK 289
+ ++ + EL ++ EF + +E KNRYK
Sbjct: 16 ENLYFQSMSRVLQAEELHEKALDPFLLQAEFFEIPMN----FVDPKEYDIPGLVRKNRYK 71
Query: 290 NILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDG-GKSYIATQGCLPSTMNDFWSMVWQ 348
ILP H+RV L D D P + YINANYI+ G K YIATQG + ST+ DFW MVWQ
Sbjct: 72 TILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQ 131
Query: 349 ENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGS 408
E+ +IVM T E KC +YWP++ Y V + T DY LR + G+
Sbjct: 132 EHTPIIVMITNI-EEMNEKCTEYWPEE--QVAYDGVEITVQKVIHTEDYRLRLISLKSGT 188
Query: 409 ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
E R + HY F +WPD P +L+ + EV
Sbjct: 189 EE-RGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQ 225
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 299 bits (768), Expect = 6e-96
Identities = 86/221 (38%), Positives = 117/221 (52%), Gaps = 10/221 (4%)
Query: 234 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 293
I V ++ + + ++ F EEF SL + T K +NR KNRY NILP
Sbjct: 10 IPVEHLEEEIRIRSADDCK--QFREEFNSLPSGHIQ--GTFELANKEENREKNRYPNILP 65
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
DH+RV L +D +P ++YINA+YI +IA QG T+NDFW MVW++
Sbjct: 66 NDHSRVILSQLD-GIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQKSAT 124
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK----GSE 409
IVM T ER + KC +YWPD TYG + V V DY +R+F + G +
Sbjct: 125 IVMLTNLKERKEEKCHQYWPDQ-GCWTYGNIRVCVEDCVVLVDYTIRKFCIQPQLPDGCK 183
Query: 410 SPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
+PR + HF +WPD GVP P +L FL +V T +HAG
Sbjct: 184 APRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAG 224
Score = 263 bits (674), Expect = 6e-82
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 31/273 (11%)
Query: 201 DSLTQLIEHYK--------------RNPMVET--------SGTVVHLKQPFNATRITVSN 238
D++ ++ + R MV+T + + ++
Sbjct: 244 DAMMAMMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLE 303
Query: 239 IHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTR 298
H + + K G EEF L R G N K R I+P+D R
Sbjct: 304 KHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMK-ENMRTGNLPANMKKARVIQIIPYDFNR 362
Query: 299 VKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTT 358
V L +YINA++I +IATQG L T+ DFW M+W+ IVM T
Sbjct: 363 VILSMKRGQ-EYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLT 421
Query: 359 KEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKG------SESPR 412
+ ER ++KC +YWP + S T+G + + ++++ +R+FLV+ E R
Sbjct: 422 EVQEREQDKCYQYWPTE-GSVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQGEQVR 480
Query: 413 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQ 445
+ +HF WP+ G+P++ +++ + V +Q
Sbjct: 481 VVRQFHFHGWPEIGIPAEGKGMIDLIAAVQKQQ 513
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 289 bits (742), Expect = 1e-95
Identities = 71/218 (32%), Positives = 120/218 (55%), Gaps = 12/218 (5%)
Query: 238 NIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHT 297
+ H+ E ++ + S + ++ ++ + S F R + N+N+NRY+++ PFDH+
Sbjct: 5 HHHEMEKEFEQIDKSG-SWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHS 61
Query: 298 RVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMT 357
R+KL D D YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM
Sbjct: 62 RIKLHQEDND-----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVML 116
Query: 358 TKEMERGKNKCAKYWPDDHQSK---TYGAVCVNNMYESVTTDYILREFLVSK-GSESPRK 413
+ ME+G KCA+YWP + + + + + E + + Y +R+ + ++ R+
Sbjct: 117 NRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETRE 176
Query: 414 IYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAGN 451
I H+H+ WPD GVP P LNFL++V + +
Sbjct: 177 ILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEH 214
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 297 bits (762), Expect = 3e-95
Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 8/216 (3%)
Query: 236 VSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFD 295
++++ D + L+ + F +E+ES+ + FT N+ KNRY N++ +D
Sbjct: 2 ITDLADNIERLKA--NDGLKFSQEYESIDPGQQ---FTWENSNLEVNKPKNRYANVIAYD 56
Query: 296 HTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIV 355
H+RV L +D VPG++YINANYI +YIATQG LP TM DFW MVW++ +V
Sbjct: 57 HSRVILTSID-GVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVV 115
Query: 356 MTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPRKI 414
M T+ E+ + KC +YWP ++T G + V + Y +R F + K GS R++
Sbjct: 116 MMTRLEEKSRVKCDQYWPAR-GTETCGLIQVTLLDTVELATYTVRTFALHKSGSSEKREL 174
Query: 415 YHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAG 450
+ F AWPDHGVP P +L FL V + AG
Sbjct: 175 RQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAG 210
Score = 258 bits (660), Expect = 3e-80
Identities = 77/273 (28%), Positives = 120/273 (43%), Gaps = 24/273 (8%)
Query: 201 DSLTQLIEHYK--------------RNPMVETSG-------TVVHLKQPFNATRITVSNI 239
D++ + ++H K RN MV+T ++ + +
Sbjct: 230 DAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLY 289
Query: 240 HDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRV 299
Q E L H N+ KNR NI+P++ TRV
Sbjct: 290 AHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELTRV 349
Query: 300 KLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTK 359
L+ + V G++YINA+++ K+YIATQG L + DFW M+W+ N +IVM TK
Sbjct: 350 CLQPIR-GVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTK 408
Query: 360 EMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSES-PRKIYHYH 418
E G+ KC +YWP + +S Y V+ M E YILREF V+ + R I +
Sbjct: 409 LREMGREKCHQYWPAE-RSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQ 467
Query: 419 FQAWPDHGVPSDPGCVLNFLYEVNTRQDIHAGN 451
F WP+ GVP ++F+ +V+ ++ +
Sbjct: 468 FTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQD 500
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 286 bits (735), Expect = 1e-94
Identities = 76/229 (33%), Positives = 107/229 (46%), Gaps = 15/229 (6%)
Query: 224 HLKQPFNATRITVSNIHDRV-----TELQKENSSKAGFWEEFESLQQQESRHLFTRREGQ 278
H +T+ + LQ++ S EEF + + +
Sbjct: 9 HHHHMNTPREVTLHFLRTAGHPLTRWALQRQPPSPKQLEEEFLKIPSNF----VSPEDLD 64
Query: 279 KLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDG-GKSYIATQGCLPS 337
+ +K+RYK ILP +RV L +YINANYI+ DG K YIATQG +P+
Sbjct: 65 IPGHASKDRYKTILPNPQSRVCLGRAQSQ-EDGDYINANYIRGYDGKEKVYIATQGPMPN 123
Query: 338 TMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDY 397
T++DFW MVWQE V +IVM T+ E GK KC YWP + +TYG + +Y
Sbjct: 124 TVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTE--EETYGPFQIRIQDMKECPEY 180
Query: 398 ILREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+R+ + E R + H F AWPDH P G +L + EV +
Sbjct: 181 TVRQLTIQYQEER-RSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPE 228
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 285 bits (731), Expect = 7e-94
Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 11/210 (5%)
Query: 245 ELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDV 304
E ++ ++ + + + ++ + H + R + +NRN+NRY+++ P+DH+RVKL++
Sbjct: 8 EFEELDTQR-RWQPLYLEIRNES--HDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNA 64
Query: 305 DEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERG 364
+ D YINA+ + E+ +SYI TQG LP+T FW MVWQ+ + +VM + +E+
Sbjct: 65 END-----YINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKE 119
Query: 365 KNKCAKYWPDDHQSKT--YGAVCVNNMYESVTTDYILREFLVSKGSES-PRKIYHYHFQA 421
KCA+YWP D Q V + E V + Y + + + R I H+H+
Sbjct: 120 SVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTT 179
Query: 422 WPDHGVPSDPGCVLNFLYEVNTRQDIHAGN 451
WPD GVP P LNFL++V ++ +
Sbjct: 180 WPDFGVPESPASFLNFLFKVRESGSLNPDH 209
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 279 bits (716), Expect = 7e-92
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 23/223 (10%)
Query: 248 KENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVK--LKDVD 305
+ + EF LQ+QE + L NR+KNRY +IL + T LK V
Sbjct: 13 STRAQYSRMQREFVQLQRQE--NPRNINFTTSLKNRHKNRYLDILANEETIYPPVLKAVG 70
Query: 306 EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGK 365
YIN N I + +++A Q +P + DF + ++ V ++VM TK E G
Sbjct: 71 AQPGRYPYINGNLIDLD-LPHTFVACQAPVPQGVPDFLETLSEKKVDLVVMLTKLREGGV 129
Query: 366 NKCAKYWPDDHQSK------TYGAVCVNNMYES-----VTTDYILREFLVSKGSESPRKI 414
K +YWP++ + + A+ V E+ D + R ++ + ++
Sbjct: 130 LKAERYWPEEEEDSLSFPESGHDAIKVTRDAEASYEVDAELDIVRRPLVIHVPGKPMHRV 189
Query: 415 YHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD-----IH--AG 450
+ WPDHGVP L + +H AG
Sbjct: 190 LQVQYVGWPDHGVPESAASFDELLSVIKNCVTTSPILVHCSAG 232
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 275 bits (706), Expect = 6e-91
Identities = 63/172 (36%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Query: 275 REGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGC 334
R G N KNR I+P++ RV + + +Y+NA++I SYIA+QG
Sbjct: 2 RTGNLPANMKKNRVLQIIPYEFNRVIIPVKRGE-ENTDYVNASFIDGYRQKDSYIASQGP 60
Query: 335 LPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVT 394
L T+ DFW M+W+ IVM T+ ERG+ KCA+YWP D +YG + V E
Sbjct: 61 LLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPSD-GLVSYGDITVELKKEEEC 119
Query: 395 TDYILREFLVSKGSES-PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQ 445
Y +R+ LV+ E+ R+I +HF WP+ G+PSD ++N + V +Q
Sbjct: 120 ESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQ 171
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 245 bits (627), Expect = 1e-78
Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 25/204 (12%)
Query: 251 SSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPG 310
++A +L+ + R Q NR+++I T V+
Sbjct: 30 EARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRRQTAVRA--------- 80
Query: 311 AEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCA- 369
+NANYIQ + IA Q L S + + M+ + V+ + E +
Sbjct: 81 --DLNANYIQVGN--TRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGM 136
Query: 370 -KYWPDDHQSKTYGAVCVNNMYESVT---TDYILREFLVS--KGSESPRKIYHYHFQAWP 423
Y+ S TYG++ V + + + ++ + + + H WP
Sbjct: 137 PDYFRQ---SGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWP 193
Query: 424 DHGVPSD--PGCVLNFLYEVNTRQ 445
D S + + + + +
Sbjct: 194 DQTAVSSEVTKALASLVDQTAETK 217
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 220 bits (562), Expect = 6e-68
Identities = 36/230 (15%), Positives = 68/230 (29%), Gaps = 21/230 (9%)
Query: 227 QPFNATRITVSNIHDRVT--ELQKENSSKAGFWEEFESLQQQ----ESRHLFTRREGQKL 280
+ V D+ + EL + +E +++ + E+ +
Sbjct: 85 SQWGTCGGEVERWVDKASTHELTQAVKKIHVIAKELKNVTAELEKIEAGAPMPQTMSGPT 144
Query: 281 DNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQG--CLPST 338
+ +I T+VKL D +N DG +A P
Sbjct: 145 LGLARFAVSSIPINQQTQVKLSDGMPV-----PVNTLTF---DGKPVALAGSYPKNTPDA 196
Query: 339 MNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYI 398
+ M+ ++ +V+ T E + + + P S T+G V N+ S +
Sbjct: 197 LEAHMKMLLEKECSCLVVLTSEDQM---QAKQLPPYFRGSYTFGEVHTNSQKVSSASQGE 253
Query: 399 LREF--LVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 446
+ + E I H + WPDH + V
Sbjct: 254 AIDQYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQ 303
>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70,
tyrosine kinase, transferase; HET: PTR; 1.90A {Homo
sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A
Length = 254
Score = 207 bits (529), Expect = 1e-64
Identities = 56/275 (20%), Positives = 97/275 (35%), Gaps = 75/275 (27%)
Query: 2 SSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ +F+ SIS EAE L G DG FL+R + G + LS+ + H I+
Sbjct: 4 AHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQL 63
Query: 61 DC-YDLYGGEKFATLSELVQFYMENQGQL------------------------------- 88
+ Y + GG+ +EL +FY + L
Sbjct: 64 NGTYAIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRD 123
Query: 89 --------------KKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGS 134
+ + +++ ++ W+H L+ +EAE+ + +
Sbjct: 124 YVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERMPWYHSSLTREEAERKLYSGAQ--- 180
Query: 135 FLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYD 193
+G FL+R + G + LS+ V H +I KY
Sbjct: 181 -------------------TDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKYC 220
Query: 194 VGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
+ G +FD+L QL+E+ K G + LK+
Sbjct: 221 IPEGTKFDTLWQLVEYLKLKAD----GLIYCLKEA 251
Score = 109 bits (273), Expect = 2e-27
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 24/111 (21%)
Query: 106 DPTTER-WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQ 164
DP +F+G +S EAE+ + G +G FL+R+
Sbjct: 1 DPAAHLPFFYGSISRAEAEEHLKLAGM----------------------ADGLFLLRQCL 38
Query: 165 SKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNP 214
G +VLS+ D + H I Q Y + GG+ +L E Y R+P
Sbjct: 39 RSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDP 89
Score = 106 bits (265), Expect = 2e-26
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNT 59
W+H S++ EAE L DG FL+RP + G + LS+ V H I
Sbjct: 156 HERMPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQD 214
Query: 60 GD-CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
Y + G KF TL +LV++ L + LK
Sbjct: 215 KAGKYCIPEGTKFDTLWQLVEYLKLKADGL------IYCLKEA 251
>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition,
tandem SH2 domains, A analog, ATP-binding,
craniosynostosis, disease mutation; HET: PTR DVT ACP;
2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A*
Length = 226
Score = 203 bits (518), Expect = 2e-63
Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 45/247 (18%)
Query: 2 SSRRWFHPSISGV-----EAEVLLLER-----GYDGSFLVRPSRSNPGDFTLSVRLNGEV 51
SS +WFH + AE LL E DGSFLVR S + GD+TLS NG+V
Sbjct: 2 SSEKWFHGKLGAGRDGRHIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKV 61
Query: 52 THIKIQNTGDC----YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADP 107
H +I + D + L F +L +L+ Y + + + +
Sbjct: 62 QHCRIHSRQDAGTPKFFLTDNLVFDSLYDLITHYQQVPLRCNEFEM--RLSEPVPQTNAH 119
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
++ W+H L+ +AE ++++ ++G+FLVR+ ++P
Sbjct: 120 ESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR------------------------NEP 155
Query: 168 GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQ 227
+ +S R + K+ H ++ Q + + G +FDSL LI +Y+++P+ + L+
Sbjct: 156 NSYAISFRAEGKIKHCRVQ-QEGQTVMLGNSEFDSLVDLISYYEKHPL----YRKMKLRY 210
Query: 228 PFNATRI 234
P N +
Sbjct: 211 PINEEAL 217
Score = 108 bits (270), Expect = 3e-27
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
S+ W+H S++ +AE +L+ DG+FLVR + P + +S R G++ H ++Q G
Sbjct: 119 HESKEWYHASLTRAQAEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEGKIKHCRVQQEG 177
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSC 104
+ G +F +L +L+ +Y ++ K + L+YP++
Sbjct: 178 QTV-MLGNSEFDSLVDLISYYEKHPLYRKMK------LRYPINE 214
>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain;
HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1
PDB: 1csy_A* 1csz_A*
Length = 254
Score = 204 bits (520), Expect = 3e-63
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 31/254 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNT 59
+ +F +I+ EAE L++ G DG +L+R SR+ G F LSV + H I+
Sbjct: 2 ANHLPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERE 61
Query: 60 GDC-YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLS 118
+ Y + GG A+ ++L ++ + L ++ + E +
Sbjct: 62 LNGTYAIAGGRTHASPADLCHYHSQESDGLVCLLKKPFNRPQGVQPKTGPFEDLKENLIR 121
Query: 119 GKEAEQLILQKGKNGSFLVRESQS----------------------KEAEQLILQKGK-N 155
+ LQ ++ + +E+EQ++L K N
Sbjct: 122 EYVKQTWNLQGQALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEQIVLIGSKTN 181
Query: 156 GSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNP 214
G FL+R + G + L + + KV H I K + G++FD+L QL+EHY
Sbjct: 182 GKFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKFDTLWQLVEHYSYKA 240
Query: 215 MVETSGTVVHLKQP 228
G + L P
Sbjct: 241 D----GLLRVLTVP 250
>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain,
protein protein interactions, PTR residues, HYDR peptide
complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A*
1aya_A* 1ayb_A* 1ayc_A* 1ayd_A
Length = 109
Score = 152 bits (386), Expect = 2e-45
Identities = 86/106 (81%), Positives = 97/106 (91%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M+SRRWFHP+I+GVEAE LLL RG DGSFL RPS+SNPGDFTLSVR NG VTHIKIQNTG
Sbjct: 4 MTSRRWFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTG 63
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCAD 106
D YDLYGGEKFATL+ELVQ+YME+ GQLK++N +VIELKYPL+CAD
Sbjct: 64 DYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCAD 109
Score = 130 bits (328), Expect = 5e-37
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 25/128 (19%)
Query: 105 ADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQ 164
+ T+ RWFH ++G EAE L+L +G +GSFL R S +
Sbjct: 2 SHMTSRRWFHPNITGVEAENLLLTRGVDGSFLARPS-----------------------K 38
Query: 165 SKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNP--MVETSGTV 222
S PGDF LSVR + VTH+ I+ + YD+ GGE+F +L +L+++Y + + E +G V
Sbjct: 39 SNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDV 98
Query: 223 VHLKQPFN 230
+ LK P N
Sbjct: 99 IELKYPLN 106
>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 138 bits (351), Expect = 5e-40
Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 25/133 (18%)
Query: 101 PLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLV 160
D T WF G + ++ + L L+ +G++L+
Sbjct: 7 GSREIDYTAYPWFAGNMERQQTDNL------------------------LKSHASGTYLI 42
Query: 161 RESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVET-S 219
RE ++ F +S++ +D+V H+ + + + ++FDSL +L+E+Y+ + + E+
Sbjct: 43 RERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFDSLLELVEYYQCHSLKESFK 102
Query: 220 GTVVHLKQPFNAT 232
LK P++
Sbjct: 103 QLDTTLKYPYSGP 115
Score = 124 bits (313), Expect = 1e-34
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
++ WF ++ + + LL G++L+R + F +S++ N EV HIK+
Sbjct: 13 YTAYPWFAGNMERQQTDNLLKSHA-SGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKD 71
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSC 104
+ + +KF +L ELV++Y + + + Q LKYP S
Sbjct: 72 NWIHITEAKKFDSLLELVEYYQCHSLKESFK-QLDTTLKYPYSG 114
>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain,
phosphotyrosine binding, signaling protein, signaling
protein-antagonist complex; HET: PTR; 1.60A {Homo
sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A*
3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A*
2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A*
1fyr_A* ...
Length = 117
Score = 137 bits (347), Expect = 2e-39
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 3 MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDG 62
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHG 115
KF +L+ELV ++ ++ + + PT + H
Sbjct: 63 AGKYFLWVVKFNSLNELVDYHRSTSVSRNQQ--IFLRDIEQV-PQQPTYVQAHHH 114
Score = 126 bits (318), Expect = 2e-35
Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
WF G++ +AE+++ ++ +G+FL+RES +S PG
Sbjct: 5 PHPWFFGKIPRAKAEEMLSKQRHDGAFLIRES-----------------------ESAPG 41
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
DF LSV+ + V H + +F+SL +L+++++ + + +
Sbjct: 42 DFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQ 101
>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation,
binding specificity; HET: PTR MPD; 1.45A {Homo sapiens}
PDB: 1z3k_A 2ci9_A* 2ci8_A*
Length = 102
Score = 135 bits (343), Expect = 4e-39
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 107 PTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSK 166
P W++G ++ +AE + ++G G FL+R+S +S
Sbjct: 2 PLGSEWYYGNVTRHQAECALNERGVEGDFLIRDS-----------------------ESS 38
Query: 167 PGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMV-ETSGTVVHL 225
P DF +S++ K H ++ Y + G +F ++ +L+EHYK+ P+ G ++L
Sbjct: 39 PSDFSVSLKASGKNKHFKVQLVDNVYCI-GQRRFHTMDELVEHYKKAPIFTSEHGEKLYL 97
Query: 226 KQP 228
+
Sbjct: 98 VRA 100
Score = 125 bits (315), Expect = 3e-35
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDC 62
W++ +++ +AE L ERG +G FL+R S S+P DF++S++ +G+ H K+Q +
Sbjct: 4 GSEWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNV 63
Query: 63 YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPL 102
Y + G +F T+ ELV+ Y + + E + L L
Sbjct: 64 YCI-GQRRFHTMDELVEHYKKAPI-FTSEHGEKLYLVRAL 101
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 147 bits (371), Expect = 1e-38
Identities = 57/291 (19%), Positives = 101/291 (34%), Gaps = 75/291 (25%)
Query: 2 SSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ +F+ SIS EAE L G DG FL+R + G + LS+ + H I+
Sbjct: 6 AHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQL 65
Query: 61 DC-YDLYGGEKFATLSELVQFYMEN---------------------QGQLKKRNQEVIE- 97
+ Y + GG+ +EL +FY + G ++
Sbjct: 66 NGTYAIAGGKAHCGPAELCEFYSRDPDGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRD 125
Query: 98 -----------------------LKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGS 134
++ ++ W+H L+ +EAE+ + +
Sbjct: 126 YVRQTWKLEGEALEQAIISQAPQVEKLIATTAHERMPWYHSSLTREEAERKLYSGAQ--- 182
Query: 135 FLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYD 193
+G FL+R + G + LS+ V H +I KY
Sbjct: 183 -------------------TDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKYC 222
Query: 194 VGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVT 244
+ G +FD+L QL+E+ K G + LK+ + + ++ T
Sbjct: 223 IPEGTKFDTLWQLVEYLKLKA----DGLIYCLKEACPNSSASNASGAAAPT 269
Score = 94.2 bits (234), Expect = 8e-21
Identities = 35/187 (18%), Positives = 60/187 (32%), Gaps = 28/187 (14%)
Query: 105 ADP-TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRES 163
DP +F+G +S EAE+ + G +G FL+R+
Sbjct: 2 PDPAAHLPFFYGSISRAEAEEHLKLAG----------------------MADGLFLLRQC 39
Query: 164 QSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV 222
G +VLS+ D + H I Q Y + GG+ +L E Y R+P G
Sbjct: 40 LRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAHCGPAELCEFYSRDP----DGLP 95
Query: 223 VHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDN 282
+L++P N + E +++ + + +
Sbjct: 96 CNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQTWKLEGEALEQAIISQAPQVEKLIAT 155
Query: 283 RNKNRYK 289
R
Sbjct: 156 TAHERMP 162
Score = 78.4 bits (193), Expect = 1e-15
Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 6 WFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD-CY 63
W+H S++ EAE L DG FL+RP + G + LS+ V H I Y
Sbjct: 163 WYHSSLTREEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKY 221
Query: 64 DLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLS 118
+ G KF TL +LV++ + + LK + +
Sbjct: 222 CIPEGTKFDTLWQLVEYLKLKA------DGLIYCLKEACPNSSASNASGAAAPTL 270
>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2;
SH2, phosphoinositide phospholipase C, PLC-gamma-2,
phospholipase C-gamma-2; NMR {Rattus norvegicus}
Length = 124
Score = 135 bits (341), Expect = 1e-38
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
S+ W++ +S EAE +L+ DG+FL+R + ++ R G+V H +I G
Sbjct: 16 HESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKR-EGTDSYAITFRARGKVKHCRINRDG 74
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSG 119
+ L F +L ELV +Y ++ K R L+YP++ P + G SG
Sbjct: 75 RHFVLGTSAYFESLVELVSYYEKHALYRKMR------LRYPVT---PELLERYSGPSSG 124
Score = 121 bits (307), Expect = 1e-33
Identities = 25/142 (17%), Positives = 59/142 (41%), Gaps = 29/142 (20%)
Query: 100 YPLSCADP-TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSF 158
P+ +P ++ W++ +LS EAE ++++ ++G+FL+R+ +
Sbjct: 8 DPVPNPNPHESKPWYYDRLSRGEAEDMLMRIPRDGAFLIRKREG---------------- 51
Query: 159 LVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVET 218
+ ++ R KV H I + +G F+SL +L+ +Y+++ +
Sbjct: 52 --------TDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFESLVELVSYYEKHAL--- 100
Query: 219 SGTVVHLKQPFNATRITVSNIH 240
+ L+ P + +
Sbjct: 101 -YRKMRLRYPVTPELLERYSGP 121
>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine,
tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo
sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A
Length = 117
Score = 134 bits (339), Expect = 2e-38
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 31/135 (22%)
Query: 101 PLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLV 160
LS A T+ WFHG++S +E+++LI Q+G +G FLV
Sbjct: 5 SLSAAIHRTQLWFHGRISREESQRLIGQQGL----------------------VDGLFLV 42
Query: 161 RESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDV-----GGGEQFDSLTQLIEHYKRNPM 215
RESQ P FVLS+ KV H +I E+ + G +F L QL+E ++ N
Sbjct: 43 RESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRG 102
Query: 216 VETSGTVVHLKQPFN 230
L+
Sbjct: 103 ----ILPCLLRHCCT 113
Score = 120 bits (304), Expect = 2e-33
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNT 59
++ WFH IS E++ L+ ++G DG FLVR S+ NP F LS+ +V H I +
Sbjct: 11 HRTQLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPS 70
Query: 60 GDCYDLY-----GGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
+ LY G +F L +LV+F+ N+G L L++
Sbjct: 71 EEEGRLYFSMDDGQTRFTDLLQLVEFHQLNRGIL------PCLLRHC 111
>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform;
adapter protein, signaling protein; 2.00A {Mus musculus}
PDB: 2hdx_A* 1rpy_A 1rqq_C*
Length = 111
Score = 134 bits (339), Expect = 2e-38
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 23/123 (18%)
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
+ WFHG LS +A QL+L+ G G +G FLVR+S+++
Sbjct: 7 SGYPWFHGMLSRLKAAQLVLEGGT---------------------GSHGVFLVRQSETRR 45
Query: 168 GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSG--TVVHL 225
G+ VL+ K H+ + A F S+ ++EH++ +P+ SG + V L
Sbjct: 46 GECVLTFNFQGKAKHLRLSLNAAGQCRVQHLHFQSIFDMLEHFRVHPIPLESGGSSDVVL 105
Query: 226 KQP 228
Sbjct: 106 VSY 108
Score = 124 bits (313), Expect = 1e-34
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLE--RGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQN 58
+S WFH +S ++A L+LE G G FLVR S + G+ L+ G+ H+++
Sbjct: 6 LSGYPWFHGMLSRLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSL 65
Query: 59 TGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPL 102
F ++ ++++ + + L+ + L +
Sbjct: 66 NAAGQCRVQHLHFQSIFDMLEHFRVHPIPLESGGSSDVVLVSYV 109
>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*
Length = 138
Score = 134 bits (338), Expect = 6e-38
Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 25/140 (17%)
Query: 92 NQEVIELKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQ 151
E + + D + W+ G + AE + L
Sbjct: 8 KAEAEQNWWEGPPQDLSVHLWYAGPMERAGAESI------------------------LA 43
Query: 152 KGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYK 211
+G+FLVR+ +F +S++ + +V H+ I Y + + F LT+L+E Y+
Sbjct: 44 NRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFRGLTELVEFYQ 103
Query: 212 RNPMVETS-GTVVHLKQPFN 230
+N + + L+ PF
Sbjct: 104 QNSLKDCFKSLDTTLQFPFK 123
Score = 124 bits (314), Expect = 1e-34
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S W+ + AE +L R DG+FLVR + +F +S++ N EV HIKI
Sbjct: 23 LSVHLWYAGPMERAGAESILANRS-DGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAE 81
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
Y + + F L+ELV+FY +N + + L++P + T
Sbjct: 82 GLYRITEKKAFRGLTELVEFYQQNSLKDCFK-SLDTTLQFPFKEPEKRT 129
>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced,
ATP-binding, cell membrane, cytoplasm, membrane,
nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens}
PDB: 3eac_A
Length = 106
Score = 131 bits (331), Expect = 2e-37
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 28/120 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
WFHG+++ ++AE+L L + G FLVRES + PG
Sbjct: 7 LMPWFHGKITREQAERL------------------------LYPPETGLFLVRESTNYPG 42
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
D+ L V +D KV H I A K + F++L QL+EHY + G L +P
Sbjct: 43 DYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTSDAD----GLCTRLIKP 98
Score = 121 bits (305), Expect = 1e-33
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S WFH I+ +AE LL G FLVR S + PGD+TL V +G+V H +I
Sbjct: 5 LSLMPWFHGKITREQAERLLYPPE-TGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHA 63
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSC 104
+ F L +LV+ Y + L R L P
Sbjct: 64 SKLSIDEEVYFENLMQLVEHYTSDADGLCTR------LIKPKVM 101
>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain,
signaling protein, structural genomics, joint CE
structural genomics, JCSG; 1.50A {Homo sapiens} PDB:
1jwo_A
Length = 98
Score = 129 bits (328), Expect = 4e-37
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 28/120 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
WFHG++SG+EA Q LQ ++G FLVRES PG
Sbjct: 4 LMPWFHGKISGQEAVQQ------------------------LQPPEDGLFLVRESARHPG 39
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
D+VL V V H + + + F +L ++EHY ++ L +P
Sbjct: 40 DYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKG----AICTKLVRP 95
Score = 121 bits (305), Expect = 1e-33
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+S WFH ISG EA L DG FLVR S +PGD+ L V +V H ++ +
Sbjct: 2 LSLMPWFHGKISGQEAVQQLQPPE-DGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRD 60
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
+ F L ++V+ Y +++G + + L P
Sbjct: 61 GHLTIDEAVFFCNLMDMVEHYSKDKGAICTK------LVRPKR 97
>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 119
Score = 130 bits (330), Expect = 5e-37
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ WFH IS EA LL+ G SFLVRPS + PGD++L R N + KI T
Sbjct: 13 HEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTP 72
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
+ + GG + ++ +++ Y + Q LK P+ D +
Sbjct: 73 NNQFMMGGRYYNSIGDIIDHYRKEQIVEG------YYLKEPVPMQDQSG 115
Score = 128 bits (325), Expect = 2e-36
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 27/120 (22%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
+ WFHG++S +EA L++ G+ SFLVR S + PG
Sbjct: 15 GKIWFHGKISKQEAYNLLMTVGQVCSFLVRPS-----------------------DNTPG 51
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
D+ L RT++ + I + GG ++S+ +I+HY++ +VE +LK+P
Sbjct: 52 DYSLYFRTNENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVE----GYYLKEP 107
>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide
binding protein; HET: PTR; 1.80A {Mus musculus} SCOP:
d.93.1.1 PDB: 1r1q_A* 1r1s_A*
Length = 100
Score = 127 bits (322), Expect = 4e-36
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
WFH LS +AE L L G F++R SQS PG
Sbjct: 8 FPEWFHEGLSRHQAENL------------------------LMGKDIGFFIIRASQSSPG 43
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV 222
DF +SVR +D V H + + E+F SL +L+++Y+ + +
Sbjct: 44 DFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFPSLNKLVDYYRTTSISKQKQVF 97
Score = 118 bits (298), Expect = 9e-33
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ WFH +S +AE LL+ + G F++R S+S+PGDF++SVR +V H K+
Sbjct: 6 IEFPEWFHEGLSRHQAENLLMGKD-IGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDT 64
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVI 96
EKF +L++LV +Y + K+ Q +
Sbjct: 65 KGNYFLWTEKFPSLNKLVDYYRTT--SISKQKQVFL 98
>1jyr_A Growth factor receptor-bound protein 2; receptor binding,
regulatory, inhibitor, signaling protein-I complex; HET:
PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A*
1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E*
1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*
Length = 96
Score = 126 bits (318), Expect = 1e-35
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 23/112 (20%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
+ WF G++ +AE+++ ++ +G+FL+RES +S PG
Sbjct: 2 SMAWFFGKIPRAKAEEMLSKQRHDGAFLIRES-----------------------ESAPG 38
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSG 220
DF LSV+ + V H + +F+SL +L+++++ +
Sbjct: 39 DFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQ 90
Score = 122 bits (309), Expect = 2e-34
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDC 62
S WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 2 SMAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAG 61
Query: 63 YDLYGGEKFATLSELVQFYMEN 84
KF +L+ELV ++
Sbjct: 62 KYFLWVVKFNSLNELVDYHRST 83
>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase;
NMR {Homo sapiens}
Length = 125
Score = 126 bits (319), Expect = 2e-35
Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 35/144 (24%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
W+ ++ +AEQL+ Q+GK G F+VR+S SK G
Sbjct: 10 MYEWYSKHMTRSQAEQLLKQEGKEGGFIVRDS------------------------SKAG 45
Query: 169 DFVLSVRTDD------KVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGT 221
+ +SV + H ++ + +Y + F ++ +LI +++ N G
Sbjct: 46 KYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYLAEKHLFSTIPELINYHQHNSA----GL 101
Query: 222 VVHLKQPFNATRITVSNIHDRVTE 245
+ LK P + + H
Sbjct: 102 ISRLKYPVSQQNKNAPSTHHHHHH 125
Score = 113 bits (284), Expect = 2e-30
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVR------LNGEVTHI 54
+ W+ ++ +AE LL + G +G F+VR S S G +T+SV G + H
Sbjct: 8 IEMYEWYSKHMTRSQAEQLLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHY 66
Query: 55 KIQNTGDC-YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWF 113
+ +T Y L F+T+ EL+ ++ N L + LKYP+S +
Sbjct: 67 VVCSTPQSQYYLAEKHLFSTIPELINYHQHNSAGL------ISRLKYPVSQQNKNAPSTH 120
Query: 114 HGQ 116
H
Sbjct: 121 HHH 123
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6
(PTK6/BRK), SRC homology 2(S domain, solution structure,
backbone dynamics, transferase; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 100
Score = 124 bits (315), Expect = 4e-35
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 27/121 (22%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
+E WF G +S EA + + +G G+FL+R S+
Sbjct: 1 SEPWFFGCISRSEAVRRLQAEGN----------------------ATGAFLIRVSEKPSA 38
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQ 227
D+VLSVR V H I +A + + F SL +L+ +++ + + L
Sbjct: 39 DYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSL----SHGLRLAA 94
Query: 228 P 228
P
Sbjct: 95 P 95
Score = 112 bits (283), Expect = 2e-30
Identities = 33/101 (32%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 3 SRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI-QNTG 60
S WF IS EA L G G+FL+R S D+ LSVR V H KI + G
Sbjct: 1 SEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAG 60
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
L F +L ELV ++ R L P
Sbjct: 61 GRLHLNEAVSFLSLPELVNYHRAQSLSHGLR------LAAP 95
>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 121
Score = 125 bits (316), Expect = 5e-35
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E WF G + +AE+ +L + G+FL+RES+S+ G
Sbjct: 15 AEPWFFGAIKRADAEKQLLYSE----------------------NQTGAFLIRESESQKG 52
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQ 227
DF LSV + V H IR E + + + F +L + + +Y G V L++
Sbjct: 53 DFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVFSTLNEFVNYYTTTS----DGLCVKLEK 108
Query: 228 P 228
P
Sbjct: 109 P 109
Score = 112 bits (283), Expect = 2e-30
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNT 59
+ + WF +I +AE LL G+FL+R S S GDF+LSV G V H +I+
Sbjct: 13 LQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRL 72
Query: 60 GD-CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
+ + L + F+TL+E V +Y L + L+ P +
Sbjct: 73 DEGGFFLTRRKVFSTLNEFVNYYTTTSDGLCVK------LEKPCLKIQVSG 117
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5-
triphosphate, wortmannin, H1047R, ATP-binding, disease
mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB:
3hiz_B 2rd0_B 4a55_B* 3mtt_A
Length = 373
Score = 131 bits (331), Expect = 1e-34
Identities = 42/267 (15%), Positives = 90/267 (33%), Gaps = 35/267 (13%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
W+ G +S +E + L+ +G+FLVR++ +K GD
Sbjct: 10 AEWYWGDISREEVNEK-LRDTADGTFLVRDASTKM----------------------HGD 46
Query: 170 FVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV-VHLKQP 228
+ L++R + I + KY F S+ +LI HY+ + + + + V L P
Sbjct: 47 YTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLLYP 106
Query: 229 FNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRY 288
+ + D + + K+ E Q++ + E + + +
Sbjct: 107 VSKYQQDQVVKEDNIEAVGKK------LHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKR 160
Query: 289 KNILPFDHTRVKLKDVDEDVP--GAEYINANYIQSEDGGKSYIATQGCLPSTMNDF---W 343
I F+ T ++ + EYI + + I +
Sbjct: 161 TAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMHNYDKLKSRISEIIDS 220
Query: 344 SMVWQENVRVIVMTTKEMERGKNKCAK 370
+E+++ +E+++ N
Sbjct: 221 RRRLEEDLKKQAAEYREIDKRMNSIKP 247
Score = 109 bits (272), Expect = 2e-26
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSN-PGDFTLSVRLNGEVTHIKIQNT 59
+ + W+ IS E L + DG+FLVR + + GD+TL++R G IKI +
Sbjct: 7 LQNAEWYWGDISREEVNEKLRDTA-DGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHR 65
Query: 60 GDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS-CADPTTERWFHGQLS 118
Y F+++ EL+ Y +V L YP+S + + +
Sbjct: 66 DGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVK-LLYPVSKYQQDQVVKEDNIEAV 124
Query: 119 GKEAEQLILQ-KGKNGSFL-VRESQSKEAEQLILQKGKNGSF 158
GK+ + Q + K+ + + E ++ ++++ +++ +F
Sbjct: 125 GKKLHEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAF 166
Score = 83.7 bits (206), Expect = 8e-18
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDC 62
+ W S + +AE LL + DG+FLVR S S G + SV ++GEV H I T
Sbjct: 300 EKTWNVGSSNRNKAENLLRGKR-DGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATG 357
Query: 63 YDLYGGEK-FATLSEL 77
Y +++L EL
Sbjct: 358 YGFAEPYNLYSSLKEL 373
Score = 74.9 bits (183), Expect = 8e-15
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 26/103 (25%)
Query: 105 ADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQ 164
+ W G + +AE L L+ ++G+FLVRES
Sbjct: 296 PHHDEKTWNVGSSNRNKAENL------------------------LRGKRDGTFLVRES- 330
Query: 165 SKPGDFVLSVRTDDKVTHVMIRCQAEKYD-VGGGEQFDSLTQL 206
SK G + SV D +V H +I A Y + SL +L
Sbjct: 331 SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKEL 373
>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 111
Score = 123 bits (312), Expect = 1e-34
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 29/128 (22%)
Query: 101 PLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLV 160
W+ G +S +EA+ LQ ++G FLV
Sbjct: 10 SARFDSSDRSAWYMGPVSRQEAQTR------------------------LQGQRHGMFLV 45
Query: 161 RESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSG 220
R+S + PGD+VLSV + +V+H +I + G ++FD L L+E YK + + T+
Sbjct: 46 RDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYLDTTT- 104
Query: 221 TVVHLKQP 228
L +P
Sbjct: 105 ----LIEP 108
Score = 107 bits (269), Expect = 2e-28
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
W+ +S EA+ L G FLVR S + PGD+ LSV N V+H I +
Sbjct: 16 SDRSAWYMGPVSRQEAQTRLQG-QRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLP 74
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
+ G ++F L L++FY + L P
Sbjct: 75 NRRFKIGDQEFDHLPALLEFYKIHYLDTTT-------LIEP 108
>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding
protein, antibody mimic, protein-protein SH2 domain,
ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB:
3uyo_A 3t04_A 1ab2_A
Length = 112
Score = 123 bits (311), Expect = 2e-34
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
W+HG +S AE L L G NGSFLVRES+S PG
Sbjct: 4 KHSWYHGPVSRNAAEYL------------------------LSSGINGSFLVRESESSPG 39
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQ 227
+S+R + +V H I ++ K V +F++L +L+ H+ G + L
Sbjct: 40 QRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVAD----GLITTLHY 95
Query: 228 P 228
P
Sbjct: 96 P 96
Score = 114 bits (288), Expect = 4e-31
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ W+H +S AE LL G +GSFLVR S S+PG ++S+R G V H +I
Sbjct: 2 LEKHSWYHGPVSRNAAEYLLSS-GINGSFLVRESESSPGQRSISLRYEGRVYHYRINTAS 60
Query: 61 DC-YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCAD-PTT 109
D + +F TL+ELV + L + L YP + PT
Sbjct: 61 DGKLYVSSESRFNTLAELVHHHSTVADGL------ITTLHYPAPKRNKPTV 105
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth
regulation, transforming protein, alternative
initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB:
1tce_A*
Length = 104
Score = 123 bits (310), Expect = 2e-34
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 28/122 (22%)
Query: 110 ERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGD 169
E WFHG+LS +EAE L+ NG FLVRES + PG
Sbjct: 7 EPWFHGKLSRREAEALLQL--------------------------NGDFLVRESTTTPGQ 40
Query: 170 FVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPM-VETSGTVVHLKQP 228
+VL+ + H+++ +F+S++ LI ++ N + + ++G+ + L+QP
Sbjct: 41 YVLTGLQSGQPKHLLLVDPEGVVRT-KDHRFESVSHLISYHMDNHLPIISAGSELCLQQP 99
Query: 229 FN 230
Sbjct: 100 VE 101
Score = 110 bits (278), Expect = 9e-30
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ WFH +S EAE LL +G FLVR S + PG + L+ +G+ H+ + +
Sbjct: 4 LRGEPWFHGKLSRREAEALLQL---NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPE 60
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPL 102
+F ++S L+ ++M+N + E+ L+ P+
Sbjct: 61 GVVRT-KDHRFESVSHLISYHMDNHLPIISAGSELC-LQQPV 100
>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; 2.50A {Mus musculus}
Length = 138
Score = 123 bits (311), Expect = 3e-34
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 26/137 (18%)
Query: 100 YPLSCADPT----TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKN 155
P+ PT E+WFH ++ + + + +LQ E K+
Sbjct: 8 EPVQDTPPTELHFGEKWFHKKVESRTSAEKLLQ-----------------EYCAETGAKD 50
Query: 156 GSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE----KYDVGGGEQFDSLTQLIEHYK 211
G+FLVRES++ P D+ LS +V H IR E KY + F+S+ LI+HY+
Sbjct: 51 GTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYYLTDNLTFNSIYALIQHYR 110
Query: 212 RNPMVETSGTVVHLKQP 228
+ + + L P
Sbjct: 111 EAHLR-CAEFELRLTDP 126
Score = 107 bits (269), Expect = 4e-28
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 3 SRRWFHPSISG-VEAEVLLLER-----GYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI 56
+WFH + AE LL E DG+FLVR S + P D+TLS +G V H +I
Sbjct: 21 GEKWFHKKVESRTSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRI 80
Query: 57 QNTGD----CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
++T + Y L F ++ L+Q Y E + + + L P+ +P+
Sbjct: 81 RSTMENGVMKYYLTDNLTFNSIYALIQHYREAHL---RCAEFELRLTDPVPNPNPSG 134
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development,
SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding,
nucleus, phosphoprotein; NMR {Homo sapiens}
Length = 116
Score = 122 bits (309), Expect = 4e-34
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 27/129 (20%)
Query: 100 YPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFL 159
+ + W+HG + EA++L+ + G FL
Sbjct: 7 HHSHMKPLAEQDWYHGAIPRIEAQELLKK--------------------------QGDFL 40
Query: 160 VRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETS 219
VRES KPG++VLSV +D + H +I+ Y G F ++ QLI+H+ V T
Sbjct: 41 VRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRF-EGTGFSNIPQLIDHHYTTKQVITK 99
Query: 220 GTVVHLKQP 228
+ V L P
Sbjct: 100 KSGVVLLNP 108
Score = 115 bits (290), Expect = 2e-31
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
++ + W+H +I +EA+ LL + G FLVR S PG++ LSV +G+ H IQ
Sbjct: 14 LAEQDWYHGAIPRIEAQELLKK---QGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVD 70
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERW 112
+ Y G F+ + +L+ + + + K+ + L P+ P ++W
Sbjct: 71 NMYRF-EGTGFSNIPQLIDHHYTTKQVITKK--SGVVLLNPI----PKDKKW 115
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein;
1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A
Length = 105
Score = 121 bits (307), Expect = 6e-34
Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 31/125 (24%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
T+ WFHG++S +E+ ++I Q+G +G FL+R+SQS P
Sbjct: 4 TQHWFHGRISREESHRIIKQQGL----------------------VDGLFLLRDSQSNPK 41
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDV-----GGGEQFDSLTQLIEHYKRNPMVETSGTVV 223
FVL++ K+ + I + G +F L QL++ Y+ N
Sbjct: 42 AFVLTLCHHQKIKNFQILPCEDDGQTFFSLDDGNTKFSDLIQLVDFYQLNKG----VLPC 97
Query: 224 HLKQP 228
LK
Sbjct: 98 KLKHH 102
Score = 115 bits (289), Expect = 2e-31
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 3 SRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD 61
++ WFH IS E+ ++ ++G DG FL+R S+SNP F L++ + ++ + +I D
Sbjct: 4 TQHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCED 63
Query: 62 CYDLY-----GGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
+ G KF+ L +LV FY N+G L + LK+
Sbjct: 64 DGQTFFSLDDGNTKFSDLIQLVDFYQLNKGVLPCK------LKHH 102
>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 110
Score = 121 bits (306), Expect = 8e-34
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 35/129 (27%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
WF G +S ++EQL+ QKGK G+F+VR S S+ G
Sbjct: 10 DYDWFAGNISRSQSEQLLRQKGKEGAFMVRNS------------------------SQVG 45
Query: 169 DFVLSVRTDD------KVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGT 221
+ +S+ + V H + AE K + FDS+ +LI +++ N +G
Sbjct: 46 MYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYLAENYCFDSIPKLIHYHQHNS----AGM 101
Query: 222 VVHLKQPFN 230
+ L+ P +
Sbjct: 102 ITRLRHPVS 110
Score = 110 bits (276), Expect = 2e-29
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVR------LNGEVTHI 54
+ WF +IS ++E LL ++G +G+F+VR S S G +T+S+ G V H
Sbjct: 8 LDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHY 66
Query: 55 KIQNTGDC-YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
+ + L F ++ +L+ ++ N + + L++P+S
Sbjct: 67 HVHTNAENKLYLAENYCFDSIPKLIHYHQHNSAGM------ITRLRHPVS 110
>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune
system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB:
1ka7_A
Length = 128
Score = 122 bits (307), Expect = 9e-34
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 12/123 (9%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M + +H IS E LLL G DGS+L+R S S PG + L V +G + ++ T
Sbjct: 1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTE 60
Query: 61 DCY------DLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFH 114
F + L+ + + + VI L+YP+
Sbjct: 61 TGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGI------VIPLQYPVEKKSSARSTQGT 114
Query: 115 GQL 117
+
Sbjct: 115 TGI 117
Score = 113 bits (285), Expect = 1e-30
Identities = 24/133 (18%), Positives = 45/133 (33%), Gaps = 33/133 (24%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
+HG++S + E+L+L G +GS+ L+R+S+S PG
Sbjct: 3 AVAVYHGKISRETGEKLLLATGLDGSY-----------------------LLRDSESVPG 39
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGG-----EQFDSLTQLIEHYKRNPMVETSGTV 222
+ L V + + + F + LI +++ G V
Sbjct: 40 VYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQ----GIV 95
Query: 223 VHLKQPFNATRIT 235
+ L+ P
Sbjct: 96 IPLQYPVEKKSSA 108
>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 119
Score = 122 bits (307), Expect = 1e-33
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 33/126 (26%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
W HG ++ +AE+L+ + GK+GSFLVR S +S
Sbjct: 9 VPCWNHGNITRSKAEELLSRTGKDGSFLVRAS-----------------------ESISR 45
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGGE-----QFDSLTQLIEHYKRNPMVETSGTV 222
+ L V + V I + K+ V E F L QLIE YK+ M G V
Sbjct: 46 AYALCVLYRNCVYTYRILPNEDDKFTVQASEGVSMRFFTKLDQLIEFYKKENM----GLV 101
Query: 223 VHLKQP 228
HL+ P
Sbjct: 102 THLQYP 107
Score = 120 bits (302), Expect = 4e-33
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 12/111 (10%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKI-QNTGDCY 63
W H +I+ +AE LL G DGSFLVR S S + L V V +I N D +
Sbjct: 11 CWNHGNITRSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKF 70
Query: 64 DLYGGEK-----FATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
+ E F L +L++FY + L V L+YP+ + T
Sbjct: 71 TVQASEGVSMRFFTKLDQLIEFYKKENMGL------VTHLQYPVPLEEEDT 115
>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding
domain, protein tyrosine kinase, signal transduction,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 121 bits (306), Expect = 1e-33
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 29/121 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
W+HG +S AE L L NGSFLVRES+S PG
Sbjct: 15 KHSWYHGPVSRSAAEYL------------------------LSSLINGSFLVRESESSPG 50
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQ 227
+S+R + +V H I A+ K V +F +L +L+ H+ G V L
Sbjct: 51 QLSISLRYEGRVYHYRINTTADGKVYVTAESRFSTLAELVHHHSTVAD----GLVTTLHY 106
Query: 228 P 228
P
Sbjct: 107 P 107
Score = 117 bits (295), Expect = 5e-32
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ W+H +S AE LL +GSFLVR S S+PG ++S+R G V H +I T
Sbjct: 13 LEKHSWYHGPVSRSAAEYLLSSLI-NGSFLVRESESSPGQLSISLRYEGRVYHYRINTTA 71
Query: 61 DC-YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS---CADPTT 109
D + +F+TL+ELV + L V L YP + P++
Sbjct: 72 DGKVYVTAESRFSTLAELVHHHSTVADGL------VTTLHYPAPKCNKSGPSS 118
>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 125
Score = 120 bits (304), Expect = 3e-33
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 35/127 (27%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
W+H ++ +AE L+ Q+ K G+F+VR+S G
Sbjct: 15 IYEWYHRNITRNQAEHLLRQESKEGAFIVRDS------------------------RHLG 50
Query: 169 DFVLSVRT------DDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGT 221
+ +SV + + H I+ ++ V F S+ +LI +++ N G
Sbjct: 51 SYTISVFMGARRSTEAAIKHYQIKKNDSGQWYVAERHAFQSIPELIWYHQHNAA----GL 106
Query: 222 VVHLKQP 228
+ L+ P
Sbjct: 107 MTRLRYP 113
Score = 113 bits (285), Expect = 2e-30
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 14/115 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL------NGEVTHI 54
+ W+H +I+ +AE LL + +G+F+VR S + G +T+SV + + H
Sbjct: 13 LEIYEWYHRNITRNQAEHLLRQESKEGAFIVRDS-RHLGSYTISVFMGARRSTEAAIKHY 71
Query: 55 KIQNTGDC-YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPT 108
+I+ + + F ++ EL+ ++ N L R L+YP+ +
Sbjct: 72 QIKKNDSGQWYVAERHAFQSIPELIWYHQHNAAGLMTR------LRYPVGLMGSS 120
>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal
transduction lymphocyte, signaling protein; HET: PTR;
2.15A {Mus musculus} SCOP: d.93.1.1
Length = 103
Score = 120 bits (302), Expect = 3e-33
Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 33/125 (26%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
++HG L+ +E E L+L+ G +G+FL+R+S +S PG
Sbjct: 5 YYHGCLTKRECEALLLKGGVDGNFLIRDS-----------------------ESVPGALC 41
Query: 172 LSVRTDDKVTHVMIRCQAE-KYDVGGGE-----QFDSLTQLIEHYKRNPMVETSGTVVHL 225
L V V I + Y + F +L +L+ Y + G VVHL
Sbjct: 42 LCVSFKKLVYSYRIFREKHGYYRIETDAHTPRTIFPNLQELVSKYGKPGQ----GLVVHL 97
Query: 226 KQPFN 230
P
Sbjct: 98 SNPIM 102
Score = 113 bits (286), Expect = 6e-31
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 12/103 (11%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCY-- 63
++H ++ E E LLL+ G DG+FL+R S S PG L V V +I Y
Sbjct: 5 YYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYR 64
Query: 64 ----DLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPL 102
F L ELV Y + L V+ L P+
Sbjct: 65 IETDAHTPRTIFPNLQELVSKYGKPGQGL------VVHLSNPI 101
>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 119
Score = 120 bits (302), Expect = 4e-33
Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 30/126 (23%)
Query: 105 ADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQ 164
A WFHG +S ++AE L L+ GSFL+R S
Sbjct: 11 AQDGVPEWFHGAISREDAENL------------------------LESQPLGSFLIRVSH 46
Query: 165 SKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQ--FDSLTQLIEHYKRNPMVETSGTV 222
S G + LS + H M++ + + GE+ SL L+ +++ P+
Sbjct: 47 SHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAHTSLDALVTFHQQKPI---EPRR 102
Query: 223 VHLKQP 228
L QP
Sbjct: 103 ELLTQP 108
Score = 101 bits (254), Expect = 3e-26
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYD 64
WFH +IS +AE LL + GSFL+R S S+ G +TLS + H ++ D
Sbjct: 17 EWFHGAISREDAENLLESQP-LGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTF 74
Query: 65 LYGGEK--FATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
+ GEK +L LV F+ + + ++ L P D
Sbjct: 75 MIPGEKVAHTSLDALVTFHQQKPIEPRREL-----LTQPCRQKDSGP 116
>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET:
PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A*
1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L*
1cwe_A*
Length = 105
Score = 118 bits (298), Expect = 1e-32
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 32/126 (25%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E WF LS K+AE+ +L G +GSFL+RES+S G
Sbjct: 3 PEPWFFKNLSRKDAERQLLAPG----------------------NTHGSFLIRESESTAG 40
Query: 169 DFVLSVRTDDK-----VTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV 222
F LSVR D+ V H IR + + F L +L+ HY G
Sbjct: 41 SFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASD----GLC 96
Query: 223 VHLKQP 228
L +P
Sbjct: 97 TRLSRP 102
Score = 110 bits (278), Expect = 1e-29
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGE-----VTHI 54
+ WF ++S +AE LL G GSFL+R S S G F+LSVR + V H
Sbjct: 1 LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHY 60
Query: 55 KIQNTGD-CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
KI+N + + + F L ELV+ Y L L P
Sbjct: 61 KIRNLDNGGFYISPRITFPGLHELVRHYTNASDGL------CTRLSRPCQ 104
>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction,
peptide complex, complex (proto-oncogene/early protein);
HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*
Length = 106
Score = 118 bits (298), Expect = 1e-32
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 32/126 (25%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+L K+AE+ +L G G+FL+RES++ G
Sbjct: 4 AEEWYFGKLGRKDAERQLLSFGN----------------------PRGTFLIRESETTKG 41
Query: 169 DFVLSVRT-----DDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV 222
+ LS+R D V H IR Y + QF++L QL++HY G
Sbjct: 42 AYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAA----GLS 97
Query: 223 VHLKQP 228
L P
Sbjct: 98 SRLVVP 103
Score = 108 bits (273), Expect = 5e-29
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRL-----NGEVTHI 54
+ + W+ + +AE LL G G+FL+R S + G ++LS+R V H
Sbjct: 2 IQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHY 61
Query: 55 KIQNTGD-CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
KI+ + Y + +F TL +LVQ Y E L R L P
Sbjct: 62 KIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLSSR------LVVPSH 105
>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit;
transferase, polymorphism, UBL conjugation,
phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo
sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A
1oo4_A* 2pna_A 2pnb_A
Length = 120
Score = 118 bits (297), Expect = 3e-32
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 24/124 (19%)
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
W+ G +S +E + L+ +G+FLVR++ +K
Sbjct: 9 QNAEWYWGDISREEVNEK-LRDTADGTFLVRDASTKM----------------------H 45
Query: 168 GDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETS-GTVVHLK 226
GD+ L++R + I + KY F S+ +LI HY+ + + + V L
Sbjct: 46 GDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHYRNESLAQYNPKLDVKLL 105
Query: 227 QPFN 230
P +
Sbjct: 106 YPVS 109
Score = 108 bits (271), Expect = 1e-28
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSN-PGDFTLSVRLNGEVTHIKIQNT 59
+ + W+ IS E L + DG+FLVR + + GD+TL++R G IKI +
Sbjct: 8 LQNAEWYWGDISREEVNEKLRDTA-DGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHR 66
Query: 60 GDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
Y F+++ EL+ Y + + ++L YP+S
Sbjct: 67 DGKYGFSDPLTFSSVVELINHYRNES-LAQYNPKLDVKLLYPVS 109
>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein
binding/transferase complex; HET: PTR; NMR {Homo
sapiens} SCOP: d.93.1.1
Length = 109
Score = 116 bits (293), Expect = 5e-32
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 46/136 (33%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
W+ G+LS +EA L LQ ++G FLVR+S + PGD+V
Sbjct: 2 WYWGRLSRQEAVAL------------------------LQGQRHGVFLVRDSSTSPGDYV 37
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVG-----------------GGEQFDSLTQLIEHYKRNP 214
LSV + +V+H +I + V G ++FDSL L+E YK +
Sbjct: 38 LSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHY 97
Query: 215 MVETSGTVVHLKQPFN 230
+ T L +P +
Sbjct: 98 LDTT-----TLIEPVS 108
Score = 101 bits (254), Expect = 2e-26
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 25/115 (21%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+ +S EA LL+ G FLVR S ++PGD+ LSV N V+H I ++G +
Sbjct: 2 WYWGRLSRQEAV-ALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPV 60
Query: 66 Y-----------------GGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
G ++F +L L++FY + + L P+S
Sbjct: 61 PPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYL-------DTTTLIEPVS 108
>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2
domain, signaling protein; 2.30A {Homo sapiens}
Length = 126
Score = 117 bits (295), Expect = 5e-32
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 31/125 (24%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
++ WFH ++S EA++LI+Q+G +G FLVR+SQS P
Sbjct: 25 SQPWFHHKISRDEAQRLIIQQGL----------------------VDGVFLVRDSQSNPK 62
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYD-----VGGGEQFDSLTQLIEHYKRNPMVETSGTVV 223
FVLS+ K+ H I + + G +F L QL+E Y+ N
Sbjct: 63 TFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDGHTRFTDLIQLVEFYQLNKG----VLPC 118
Query: 224 HLKQP 228
LK
Sbjct: 119 KLKHY 123
Score = 117 bits (294), Expect = 9e-32
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 12/107 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNT 59
S+ WFH IS EA+ L++++G DG FLVR S+SNP F LS+ ++ H +I
Sbjct: 23 HRSQPWFHHKISRDEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPV 82
Query: 60 GDCYDLY-----GGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
D +++ G +F L +LV+FY N+G L + LK+
Sbjct: 83 EDDGEMFHTLDDGHTRFTDLIQLVEFYQLNKGVLPCK------LKHY 123
>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex
(phosphotransferase/receptor), phosphotransferase, SH2
domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1
PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A
Length = 112
Score = 115 bits (291), Expect = 2e-31
Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 29/136 (21%)
Query: 100 YPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFL 159
P+ D + W G + +AE L L+ ++G+FL
Sbjct: 2 SPIPHHD--EKTWNVGSSNRNKAENL------------------------LRGKRDGTFL 35
Query: 160 VRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVET 218
VRES SK G + SV D +V H +I A + SL +L+ HY+ +V+
Sbjct: 36 VRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKELVLHYQHTSLVQH 94
Query: 219 S-GTVVHLKQPFNATR 233
+ V L P A +
Sbjct: 95 NDSLNVTLAYPVYAQQ 110
Score = 104 bits (262), Expect = 2e-27
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 2 SSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD 61
+ W S + +AE LL + DG+FLVR S S G + SV ++GEV H I T
Sbjct: 8 DEKTWNVGSSNRNKAENLLRGKR-DGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTAT 65
Query: 62 -CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADP 107
+++L ELV Y ++ + + L YP+
Sbjct: 66 GYGFAEPYNLYSSLKELVLHYQHTS-LVQHNDSLNVTLAYPVYAQQR 111
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine
kinase, signal transduction, peptide recognition,
signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1
PDB: 1d1z_A 1d4w_A* 1m27_A*
Length = 104
Score = 114 bits (288), Expect = 3e-31
Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 33/126 (26%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
+HG++S + E+L+L G +GS+L+R+S +S PG
Sbjct: 3 AVAVYHGKISRETGEKLLLATGLDGSYLLRDS-----------------------ESVPG 39
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGG-----EQFDSLTQLIEHYKRNPMVETSGTV 222
+ L V + + + F + LI +++ G V
Sbjct: 40 VYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQ----GIV 95
Query: 223 VHLKQP 228
+ L+ P
Sbjct: 96 IPLQYP 101
Score = 113 bits (285), Expect = 9e-31
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 12/109 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
M + +H IS E LLL G DGS+L+R S S PG + L V +G + ++ T
Sbjct: 1 MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTE 60
Query: 61 DCY------DLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLS 103
F + L+ + + + VI L+YP+
Sbjct: 61 TGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGI------VIPLQYPVE 103
>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase,
phosphotransferase, phosphorylation; NMR {Mus musculus}
SCOP: d.93.1.1 PDB: 1blk_A
Length = 114
Score = 115 bits (289), Expect = 3e-31
Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 31/125 (24%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E+WF +S K+AE+ +L K GSFL+RES+S G
Sbjct: 11 VEKWFFRTISRKDAERQLLA----------------------PMNKAGSFLIRESESNKG 48
Query: 169 DFVLSVRTD----DKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVV 223
F LSV+ + V H IR Y + F +L L++HY + G
Sbjct: 49 AFSLSVKDITTQGEVVKHYKIRSLDNGGYYISPRITFPTLQALVQHYSKKG----DGLCQ 104
Query: 224 HLKQP 228
L P
Sbjct: 105 KLTLP 109
Score = 104 bits (261), Expect = 2e-27
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLL-ERGYDGSFLVRPSRSNPGDFTLSVR----LNGEVTHIK 55
+ +WF +IS +AE LL GSFL+R S SN G F+LSV+ V H K
Sbjct: 9 LEVEKWFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYK 68
Query: 56 IQNTGDC-YDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
I++ + Y + F TL LVQ Y + L +L P
Sbjct: 69 IRSLDNGGYYISPRITFPTLQALVQHYSKKGDGL------CQKLTLP 109
>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS
proline, domain swapped dimer, SH transferase; HET: CIT;
2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A
1lum_A 1lun_A 2k79_B 2k7a_B
Length = 118
Score = 110 bits (278), Expect = 1e-29
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVR------LNGEVTHI 54
+ + W++ SIS +AE LLL+ G +G+F+VR SR+ PG +T+SV N + H
Sbjct: 6 LETYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHY 64
Query: 55 KIQNTGD---CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTER 111
I+ T D Y + F ++ L+Q++ N G L V L+YP+ C P R
Sbjct: 65 HIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGGGL------VTRLRYPV-CGSPGIHR 117
Score = 110 bits (277), Expect = 1e-29
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 37/129 (28%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
T W++ +S +AE+L+L GK G+F+VR+S++ PG
Sbjct: 8 TYEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRT------------------------PG 43
Query: 169 DFVLSVRTDDK------VTHVMIRCQAE---KYDVGGGEQFDSLTQLIEHYKRNPMVETS 219
+ +SV T + H I+ + +Y V FDS+ LI++++ N
Sbjct: 44 TYTVSVFTKAIISENPCIKHYHIKETNDSPKRYYVAEKYVFDSIPLLIQYHQYNGG---- 99
Query: 220 GTVVHLKQP 228
G V L+ P
Sbjct: 100 GLVTRLRYP 108
>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain,
signal transduction inhibitor nuclear protein; 1.9A
{Homo sapiens} SCOP: a.271.1.1 d.93.1.1
Length = 169
Score = 110 bits (277), Expect = 6e-29
Identities = 33/168 (19%), Positives = 65/168 (38%), Gaps = 47/168 (27%)
Query: 103 SCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRE 162
+ + W+ G ++ EA++ L++ G+FL+R+
Sbjct: 10 ALRELGQTGWYWGSMTVNEAKEK------------------------LKEAPEGTFLIRD 45
Query: 163 SQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGG-------EQFDSLTQLIEHYKRN-- 213
S +SV+T T++ I Q K+ + +QFDS+ LI++Y +
Sbjct: 46 SSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCK 105
Query: 214 -----PMVETSGTV-VHLKQPFNAT--------RITVSNIHDRVTELQ 247
P +GTV ++L +P + R+T++ + L
Sbjct: 106 DKRTGPEAPRNGTVHLYLTKPLYTSAPSLQHLCRLTINKCTGAIWGLP 153
Score = 110 bits (276), Expect = 9e-29
Identities = 24/121 (19%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ W+ S++ EA+ L E +G+FL+R S + T+SV+ + T+++I+
Sbjct: 14 LGQTGWYWGSMTVNEAKEKLKEAP-EGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQD 72
Query: 61 DCYDLYGG-------EKFATLSELVQFYMENQGQLK------KRNQEVIELKYPLSCADP 107
+ L ++F ++ L+ +Y++ + + + L PL + P
Sbjct: 73 GKFRLDSIICVKSKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTVHLYLTKPLYTSAP 132
Query: 108 T 108
+
Sbjct: 133 S 133
>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal
transduction inhibitor, KIT regula phosphotyrosine,
signaling protein; HET: PTR; 1.45A {Homo sapiens}
Length = 141
Score = 107 bits (268), Expect = 6e-28
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
++ + W+ I+ EAE L DGSFLVR S + +LS R +G+ H +I+++
Sbjct: 21 LAKQGWYWGPITRWEAEGKL-ANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSN 79
Query: 61 DCYDLY---GGEKFATLSELVQFYMEN---------QGQLKKRNQEVIELKYPLS 103
+ Y E ++ +L++ + + + +L + L P+S
Sbjct: 80 GRFSFYEQPDVEGHTSIVDLIEHSIGDSENGAFCYSRSRLPGSATYPVRLTNPVS 134
Score = 102 bits (256), Expect = 2e-26
Identities = 27/143 (18%), Positives = 44/143 (30%), Gaps = 27/143 (18%)
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
+ W+ G ++ EAE L +GSFLVR+S
Sbjct: 22 AKQGWYWGPITRWEAEGK------------------------LANVPDGSFLVRDSSDDR 57
Query: 168 GDFVLSVRTDDKVTHVMIRCQAEKYDVG---GGEQFDSLTQLIEHYKRNPMVETSGTVVH 224
LS R+ K H I ++ E S+ LIEH +
Sbjct: 58 YLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIGDSENGAFCYSRS 117
Query: 225 LKQPFNATRITVSNIHDRVTELQ 247
+ ++N R +++
Sbjct: 118 RLPGSATYPVRLTNPVSRFMQVR 140
>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain,
feline sarcoma oncogene, structural genomics; NMR {Homo
sapiens} PDB: 2dcr_A
Length = 114
Score = 105 bits (263), Expect = 1e-27
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 35/139 (25%)
Query: 92 NQEVIELKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQ 151
+ E++ PL + W+HG + E +L++
Sbjct: 3 SGSSGEVQKPL-----HEQLWYHGAIPRAEVAELLVH----------------------- 34
Query: 152 KGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYK 211
+G FLVRESQ K ++VLSV D H +I+ Y + G E F S+ LI+H
Sbjct: 35 ---SGDFLVRESQGK-QEYVLSVLWDGLPRHFIIQSLDNLYRLEG-EGFPSIPLLIDHLL 89
Query: 212 RN--PMVETSGTVVHLKQP 228
P+ + SG V+H P
Sbjct: 90 STQQPLTKKSGVVLHRAVP 108
Score = 98.6 bits (246), Expect = 3e-25
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
+ + W+H +I E LL+ G FLVR S+ ++ LSV +G H IQ+
Sbjct: 13 LHEQLWYHGAIPRAEVAELLVH---SGDFLVRESQG-KQEYVLSVLWDGLPRHFIIQSLD 68
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
+ Y L GE F ++ L+ + Q L K++ V+ P
Sbjct: 69 NLYRL-EGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVP 108
>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell
adapter containing SH2 domain protein; NMR {Mus
musculus}
Length = 141
Score = 105 bits (263), Expect = 3e-27
Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 32/139 (23%)
Query: 105 ADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQ 164
A+ + W+ G K AE+ + + K+GSFL+R+S
Sbjct: 18 AELLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKS---------------------SGH 56
Query: 165 SKPGDFVLSVRTDDKVTHVMIRCQAE--KYDVG----GGEQFDSLTQLIEHYKRNPMV-- 216
+ L + +V ++ +R +Y +G G E F S+ +++ ++ NP+V
Sbjct: 57 DSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLVLI 116
Query: 217 ---ETSGTVVHLKQPFNAT 232
+ LK +
Sbjct: 117 DSQNNTKDSTRLKYAVKVS 135
Score = 101 bits (253), Expect = 6e-26
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGD--FTLSVRLNGEVTHIKI-- 56
+ + W+ + AE L DGSFL+R S + +TL N V +I +
Sbjct: 20 LLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRF 79
Query: 57 QNTGDCYDL----YGGEKFATLSELVQFYMENQGQL---KKRNQEVIELKYPLSC-ADPT 108
Y L G E F ++ E+V + N L + ++ LKY + + P+
Sbjct: 80 IEATKQYALGKKKNGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVSSGPS 139
Query: 109 T 109
+
Sbjct: 140 S 140
>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor,
growth regulation, signal transduction, SH2 domain,
nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1
d.93.1.1
Length = 187
Score = 104 bits (262), Expect = 1e-26
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 9/108 (8%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
+ + AE LL E +G+FL+R S F++S R H +I+ +
Sbjct: 36 CYWGVMDKYAAEALL-EGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSF 94
Query: 66 YGGE----KFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
+ ++ L++ Y + + L PL P +
Sbjct: 95 DAHDPCVFHSPDITGLLEHYKDPSACMFFE----PLLSTPLIRTFPFS 138
Score = 99.6 bits (248), Expect = 1e-24
Identities = 29/161 (18%), Positives = 44/161 (27%), Gaps = 35/161 (21%)
Query: 82 MENQGQLKKRNQEVIELKYPLSCADPTTER-----WFHGQLSGKEAEQLILQKGKNGSFL 136
M + E Y S P + + G + AE L
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMLVPDLLQINNNPCYWGVMDKYAAEAL----------- 49
Query: 137 VRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG 196
L+ G+FL+R+S + F +S R + H I +
Sbjct: 50 -------------LEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDA 96
Query: 197 GE----QFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATR 233
+ +T L+EHYK L P T
Sbjct: 97 HDPCVFHSPDITGLLEHYKDPSACMFFEP--LLSTPLIRTF 135
>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2
subdomain, PEST motif, protein complex, cytokine
regulator; HET: PTR; NMR {Mus musculus}
Length = 164
Score = 103 bits (257), Expect = 3e-26
Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 12/124 (9%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
++ +++G EA +LL G+FL+R S FTLSV+ +++IQ G + L
Sbjct: 25 FYWSAVTGGEANLLLSAEP-AGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSL 83
Query: 66 YGGE-------KFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLS 118
+F + +LV YM G + P S +
Sbjct: 84 QSDPRSTQPVPRFDCVLKLVHHYMPPPGTPSFS----LPPTEPSSEVPEQPPAQALPGST 139
Query: 119 GKEA 122
K A
Sbjct: 140 PKRA 143
Score = 98.9 bits (246), Expect = 1e-24
Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 31/111 (27%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
++ ++G EA L L G+FL+R+S + F
Sbjct: 25 FYWSAVTGGEANLL------------------------LSAEPAGTFLIRDSSDQRHFFT 60
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGE-------QFDSLTQLIEHYKRNPM 215
LSV+T ++ I+C+ + + +FD + +L+ HY P
Sbjct: 61 LSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVHHYMPPPG 111
>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide
complex, cytokine regulator; HET: PTR; 2.00A {Mus
musculus}
Length = 152
Score = 102 bits (256), Expect = 4e-26
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 19/117 (16%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
++ +++G EA +LL G+FL+R S FTLSV+ +++IQ G + L
Sbjct: 36 FYWSAVTGGEANLLLSAEP-AGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSL 94
Query: 66 YGGE-------KFATLSELVQFYMENQGQLKKRNQEV-----------IELKYPLSC 104
+F + +LV YM Q + + L PLS
Sbjct: 95 QSDPRSTQPVPRFDXVLKLVHHYMPPQALPGSTPKRAYYIYSGGEKIPLVLSRPLSS 151
Score = 93.1 bits (231), Expect = 1e-22
Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 31/116 (26%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
++ ++G EA L L G+FL+R+S + F
Sbjct: 36 FYWSAVTGGEANLL------------------------LSAEPAGTFLIRDSSDQRHFFT 71
Query: 172 LSVRTDDKVTHVMIRCQAEKYDVGGGE-------QFDSLTQLIEHYKRNPMVETSG 220
LSV+T ++ I+ + + + +FD + +L+ HY + S
Sbjct: 72 LSVKTQSGTKNLRIQXEGGSFSLQSDPRSTQPVPRFDXVLKLVHHYMPPQALPGST 127
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase,
phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus
musculus}
Length = 302
Score = 104 bits (260), Expect = 2e-25
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 27/127 (21%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
W+ G+++ +AE++ L ++G+FL+RES S+ G
Sbjct: 193 ERTWYVGKINRTQAEEM------------------------LSGKRDGTFLIRES-SQRG 227
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVET-SGTVVHLK 226
+ SV D H +I A + SL +L+ HY+ +V+ V L
Sbjct: 228 CYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHNDALTVTLA 287
Query: 227 QPFNATR 233
P A
Sbjct: 288 HPVRAPG 294
Score = 99.4 bits (247), Expect = 1e-23
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Query: 3 SRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGD- 61
R W+ I+ +AE +L DG+FL+R S S G + SV ++G+ H I T
Sbjct: 193 ERTWYVGKINRTQAE-EMLSGKRDGTFLIRES-SQRGCYACSVVVDGDTKHCVIYRTATG 250
Query: 62 CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
+ +L ELV Y ++ + + L +P+ P
Sbjct: 251 FGFAEPYNLYGSLKELVLHYQHA-SLVQHNDALTVTLAHPVRAPGPGP 297
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 97.1 bits (241), Expect = 7e-24
Identities = 42/167 (25%), Positives = 61/167 (36%), Gaps = 34/167 (20%)
Query: 68 GEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQLIL 127
GE+ L + +++ L + I + E WF LS K+AE+ +L
Sbjct: 34 GEQLRILEQSGEWWK--AQSLTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLL 91
Query: 128 QKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDK-----VTH 182
G +GSFL+RES+S G F LSVR D+ V H
Sbjct: 92 APGN----------------------THGSFLIRESESTAGSFSLSVRDFDQNQGEVVKH 129
Query: 183 VMIRCQAEK-YDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
IR + + F L +L+ HY G L +P
Sbjct: 130 YKIRNLDNGGFYISPRITFPGLHELVRHYTNAS----DGLCTRLSRP 172
Score = 82.0 bits (202), Expect = 1e-18
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGE-----VTHI 54
+ WF ++S +AE LL G GSFL+R S S G F+LSVR + V H
Sbjct: 71 LEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHY 130
Query: 55 KIQNTGD-CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
KI+N + + + F L ELV+ Y L L P
Sbjct: 131 KIRNLDNGGFYISPRITFPGLHELVRHYTNASDGL------CTRLSRP 172
>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1,
solution structure, cell junctio membrane, hydrolase,
membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A
Length = 131
Score = 93.4 bits (232), Expect = 4e-23
Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 42/126 (33%)
Query: 108 TTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKP 167
T++ W+ LS +A L L+ G+FL+R+S S
Sbjct: 18 TSKFWYKPHLSRDQAIAL------------------------LKDKDPGAFLIRDSHSFQ 53
Query: 168 GDFVLSVRT---------------DDKVTHVMIRCQAEKYDVGGGEQ---FDSLTQLIEH 209
G + L+++ + V H +I + + G F SL+ L+
Sbjct: 54 GAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIETGPKGVKIKGCPSEPYFGSLSALVSQ 113
Query: 210 YKRNPM 215
+ +P+
Sbjct: 114 HSISPI 119
Score = 91.9 bits (228), Expect = 2e-22
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 25/118 (21%)
Query: 2 SSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL-------------- 47
+S+ W+ P +S +A LL ++ G+FL+R S S G + L++++
Sbjct: 18 TSKFWYKPHLSRDQAIALLKDKD-PGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDP 76
Query: 48 -NGEVTHIKIQNTGDCYDLYGGEK---FATLSELVQFYMENQGQLKKRNQEVIELKYP 101
V H I+ + G F +LS LV + + L L+ P
Sbjct: 77 VEQLVRHFLIETGPKGVKIKGCPSEPYFGSLSALVSQHSISPISL------PCCLRIP 128
>3maz_A Signal-transducing adaptor protein 1; modular domain,
phosphotyrosine, specificity, cytoplasm, phosphoprotein,
SH2 domain, signaling protein; HET: PTR; 1.90A {Homo
sapiens}
Length = 125
Score = 91.8 bits (228), Expect = 1e-22
Identities = 15/116 (12%), Positives = 44/116 (37%), Gaps = 8/116 (6%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGE---VTHIKIQ 57
++ ++S EA +L + G+ ++RP S+ ++++++R + + H K+
Sbjct: 12 LNPMPACFYTVSRKEATEMLQKNPSLGNMILRPG-SDSRNYSITIRQEIDIPRIKHYKVM 70
Query: 58 NTGD--CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTER 111
+ G +L L ++ ++++ + + R
Sbjct: 71 SVGQNYTIELEKPVTLPNLFSVIDYFVKETRGNLRP--FIASTDENTGQEPSMEGR 124
Score = 82.6 bits (204), Expect = 2e-19
Identities = 11/107 (10%), Positives = 37/107 (34%), Gaps = 29/107 (27%)
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFV 171
+S KEA +++ + G+ ++R S ++
Sbjct: 17 ACFYTVSRKEATEMLQKNPSLGNMILRPG------------------------SDSRNYS 52
Query: 172 LSVRTD---DKVTHVMIRCQAEK--YDVGGGEQFDSLTQLIEHYKRN 213
+++R + ++ H + + ++ +L +I+++ +
Sbjct: 53 ITIRQEIDIPRIKHYKVMSVGQNYTIELEKPVTLPNLFSVIDYFVKE 99
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 95.2 bits (237), Expect = 2e-21
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDC-YD 64
W+H +S AE LL +GSFLVR S S+PG ++S+R G V H +I D
Sbjct: 107 WYHGPVSRNAAEYLLSSGI-NGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLY 165
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
+ +F TL+ELV + L L YP + T
Sbjct: 166 VSSESRFNTLAELVHHHSTVADGLITT------LHYPAPKRNKPT 204
Score = 94.8 bits (236), Expect = 4e-21
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 29/121 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
W+HG +S AE L L G NGSFLVRES+S PG
Sbjct: 104 KHSWYHGPVSRNAAEYL------------------------LSSGINGSFLVRESESSPG 139
Query: 169 DFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQ 227
+S+R + +V H I ++ K V +F++L +L+ H+ G + L
Sbjct: 140 QRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVA----DGLITTLHY 195
Query: 228 P 228
P
Sbjct: 196 P 196
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 94.7 bits (236), Expect = 3e-21
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 28/134 (20%)
Query: 95 VIELKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGK 154
V + + + + WFHG+++ ++AE+L L +
Sbjct: 65 VQKREGVKAGTKLSLMPWFHGKITREQAERL------------------------LYPPE 100
Query: 155 NGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNP 214
G FLVRES + PGD+ L V + KV H I A K + F++L QL+EHY +
Sbjct: 101 TGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFENLMQLVEHYTTDA 160
Query: 215 MVETSGTVVHLKQP 228
G L +P
Sbjct: 161 ----DGLCTRLIKP 170
Score = 93.6 bits (233), Expect = 6e-21
Identities = 33/104 (31%), Positives = 43/104 (41%), Gaps = 7/104 (6%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WFH I+ +AE LL G FLVR S + PGD+TL V G+V H +I +
Sbjct: 82 WFHGKITREQAERLLYPPE-TGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSI 140
Query: 66 YGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTT 109
F L +LV+ Y + L R L P
Sbjct: 141 DEEVYFENLMQLVEHYTTDADGLCTR------LIKPKVMEGTVA 178
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 91.9 bits (229), Expect = 1e-20
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
W+H +I E LL+ G FLVR S ++ LSV +G H IQ+ + Y
Sbjct: 15 WYHGAIPRAEVAELLVH---SGDFLVRES-QGKQEYVLSVLWDGLPRHFIIQSLDNLY-R 69
Query: 66 YGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
GE F ++ L+ + Q L K++ V+ P
Sbjct: 70 LEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRAVP 105
Score = 88.5 bits (220), Expect = 2e-19
Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 28/121 (23%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
+ W+HG + E +L++ +G FLVRESQ
Sbjct: 12 EQLWYHGAIPRAEVAELLVH--------------------------SGDFLVRESQG-KQ 44
Query: 169 DFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 228
++VLSV D H +I+ + GE F S+ LI+H T + V L +
Sbjct: 45 EYVLSVLWDGLPRHFIIQ-SLDNLYRLEGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHRA 103
Query: 229 F 229
Sbjct: 104 V 104
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A
2eyw_A
Length = 230
Score = 87.6 bits (216), Expect = 6e-20
Identities = 45/215 (20%), Positives = 72/215 (33%), Gaps = 46/215 (21%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
W+ +S EA LL + G FLVR S ++PGD+ LSV N V+H I ++G
Sbjct: 10 EERSSWYWGRLSRQEAVALLQGQR-HGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSG 68
Query: 61 DCYDLY-----------------GGEKFATLSELVQFYMENQGQ---LKKRNQEVIELKY 100
+ G ++F +L L++FY + L + +
Sbjct: 69 PRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGSG 128
Query: 101 PLSCADPTTERWFHGQLSGKEAEQLILQKG---------------------KNGSF---L 136
+ + +G + E L +KG K G
Sbjct: 129 VILRQEEAEYVRALFDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPY 188
Query: 137 VRESQSKEAEQLILQKGK-NGSFLVRESQSKPGDF 170
V + + A L G GS +PG +
Sbjct: 189 VEKYRPASASVSALIGGNQEGSHPQPLGGPEPGPY 223
Score = 83.0 bits (204), Expect = 2e-18
Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 41/172 (23%)
Query: 101 PLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLV 160
+ W+ G+LS +EA L LQ ++G FLV
Sbjct: 4 AGNFDSEERSSWYWGRLSRQEAVAL------------------------LQGQRHGVFLV 39
Query: 161 RESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG-----------------GGEQFDSL 203
R+S + PGD+VLSV + +V+H +I + V G ++FDSL
Sbjct: 40 RDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSL 99
Query: 204 TQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAG 255
L+E YK + + T+ + + I + V L N +
Sbjct: 100 PALLEFYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEE 151
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 90.5 bits (225), Expect = 8e-20
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 6 WFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR-----LNGEVTHIKIQNT 59
WF IS +AE LL G GSF++R S + G ++LSVR V H KI+
Sbjct: 72 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTL 131
Query: 60 GD-CYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPT 108
+ + + F+TL ELV Y + L ++ L P + P
Sbjct: 132 DNGGFYISPRSTFSTLQELVDHYKKGNDGLCQK------LSVPCMSSKPQ 175
Score = 86.3 bits (214), Expect = 2e-18
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 28/112 (25%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
TE WF +S K+AE+ +L G GSF++R+S++ G
Sbjct: 69 TEEWFFKGISRKDAERQLLAPG----------------------NMLGSFMIRDSETTKG 106
Query: 169 DFVLSVRT-----DDKVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNP 214
+ LSVR D V H IR + + F +L +L++HYK+
Sbjct: 107 SYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQELVDHYKKGN 158
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 89.6 bits (222), Expect = 2e-19
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVR-----LNGEVTHI 54
+ + W+ I+ E+E LLL G+FLVR S + G + LSV V H
Sbjct: 145 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHY 204
Query: 55 KIQNT--GDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERW 112
KI+ G Y + +F +L +LV +Y ++ L R L + P T+
Sbjct: 205 KIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHR------LTTVCPTSKPQTQGL 257
Query: 113 FH 114
Sbjct: 258 AK 259
Score = 82.6 bits (204), Expect = 4e-17
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 32/147 (21%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 147 AEEWYFGKITRRESERLLLN----------------------AENPRGTFLVRESETTKG 184
Query: 169 DFVLSVRTDDK-----VTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV 222
+ LSV D V H IR + + QF+SL QL+ +Y ++ G
Sbjct: 185 AYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHA----DGLC 240
Query: 223 VHLKQPFNATRITVSNIHDRVTELQKE 249
L ++ + E+ +E
Sbjct: 241 HRLTTVCPTSKPQTQGLAKDAWEIPRE 267
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 84.3 bits (207), Expect = 2e-18
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 11/140 (7%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
W+ +S EA+ L + G FLVR S + PGD+ LSV N V+H I +
Sbjct: 9 SDRSAWYMGPVSRQEAQTRLQGQR-HGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLP 67
Query: 61 DCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFH------ 114
+ G ++F L L++FY + + P +
Sbjct: 68 NRRFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPMGSVSAPNLPTAEDNLEY 127
Query: 115 ----GQLSGKEAEQLILQKG 130
G +AE L +KG
Sbjct: 128 VRTLYDFPGNDAEDLPFKKG 147
Score = 83.1 bits (204), Expect = 6e-18
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 24/110 (21%)
Query: 106 DPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQS 165
W+ G +S +EA+ LQ ++G FLVR+S +
Sbjct: 8 SSDRSAWYMGPVSRQEAQTR------------------------LQGQRHGMFLVRDSST 43
Query: 166 KPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPM 215
PGD+VLSV + +V+H +I + G ++FD L L+E YK + +
Sbjct: 44 CPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYL 93
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A
{Antonospora locustae}
Length = 178
Score = 81.4 bits (201), Expect = 2e-18
Identities = 29/209 (13%), Positives = 58/209 (27%), Gaps = 50/209 (23%)
Query: 8 HPS---ISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL-NGEVTHIKIQNTGDCY 63
HP + E+E L FL+R S G L ++ + H+KI+ + Y
Sbjct: 14 HPLFKNFNVTESENYLRSS--TDDFLIRKG-SRHGYCVLVIKFASDVFVHMKIEEHSEHY 70
Query: 64 DLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAE 123
+ F + E++ Y+ + + S ++AE
Sbjct: 71 TC-SNKHFEDIDEVISVYVRP---------------ILRNLKSIKAHAKYFN--SPEDAE 112
Query: 124 QLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV 183
+L+ + + S+ PG + +
Sbjct: 113 KLLSSFDGSKV----------------------VYAFYFSRKYPGKLTFAYNN-GSILEE 149
Query: 184 MIRCQAEKYDVGGGEQFDSLTQLIEHYKR 212
I + F + + + KR
Sbjct: 150 YIGVS-DMLTY-NNSTFKDIDSFVAYRKR 176
Score = 51.4 bits (123), Expect = 7e-08
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKV-THVMIRCQAEKYDVGGGEQF 200
E+E + + FL+R+ S+ G VL ++ V H+ I +E Y + F
Sbjct: 22 VTESENYL--RSSTDDFLIRKG-SRHGYCVLVIKFASDVFVHMKIEEHSEHYTCSN-KHF 77
Query: 201 DSLTQLIEHYKRN 213
+ + ++I Y R
Sbjct: 78 EDIDEVISVYVRP 90
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 84.8 bits (210), Expect = 6e-18
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERG-YDGSFLVRPSRSNPGDFTLSVRLNGE-----VTHI 54
+ + W+ I+ E+E LLL G+FLVR S + G + LSV V H
Sbjct: 62 IQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHY 121
Query: 55 KIQNT--GDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERW 112
KI+ G Y + +F +L +LV +Y ++ L R L + P T+
Sbjct: 122 KIRKLDSGGFY-ITSRTQFNSLQQLVAYYSKHADGLCHR------LTTVCPTSKPQTQGL 174
Query: 113 FH 114
Sbjct: 175 AK 176
Score = 79.8 bits (197), Expect = 2e-16
Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 32/147 (21%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
E W+ G+++ +E+E+L+L + G+FLVRES++ G
Sbjct: 64 AEEWYFGKITRRESERLLLN----------------------AENPRGTFLVRESETTKG 101
Query: 169 DFVLSVRTDD-----KVTHVMIRCQAE-KYDVGGGEQFDSLTQLIEHYKRNPMVETSGTV 222
+ LSV D V H IR + + QF+SL QL+ +Y ++ G
Sbjct: 102 AYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHA----DGLC 157
Query: 223 VHLKQPFNATRITVSNIHDRVTELQKE 249
L ++ + E+ +E
Sbjct: 158 HRLTTVCPTSKPQTQGLAKDAWEIPRE 184
>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 126
Score = 75.2 bits (184), Expect = 1e-16
Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 21/132 (15%)
Query: 107 PTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSK 166
P F E E+L G + ++G + +R S +K
Sbjct: 14 PLPNSVFVNTTESCEVERLFKATSPRG------------------EPQDGLYCIRNSSTK 55
Query: 167 PGDFVLSV-RTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHL 225
G ++ T +KV + I + K+ + G F S+ ++EHY + + + L
Sbjct: 56 SGKVLVVWDETSNKVRNYRIFEKDSKFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLL--L 113
Query: 226 KQPFNATRITVS 237
+ P+ T S
Sbjct: 114 RHPYGYTSGPSS 125
Score = 56.3 bits (135), Expect = 5e-10
Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 10/102 (9%)
Query: 6 WFHPSISGVEAEVLLLERG-----YDGSFLVRPSRSNPGDFTLSV-RLNGEVTHIKIQNT 59
F + E E L DG + +R S + G + + +V + +I
Sbjct: 19 VFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEK 78
Query: 60 GDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
+ L G F ++ +V+ Y + + + + L++P
Sbjct: 79 DSKFYLEGEVLFVSVGSMVEHYHTHVL----PSHQSLLLRHP 116
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 75.5 bits (185), Expect = 8e-16
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
WF I +AE +L ++ +DG+FL+R S S PGDF+LSV+ +V H K+ G
Sbjct: 60 WFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYF 119
Query: 66 YGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQLSGKEAEQL 125
KF +L+ELV ++ ++ + P F Q E +L
Sbjct: 120 LWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQ----EDGEL 175
Query: 126 ILQKG 130
++G
Sbjct: 176 GFRRG 180
Score = 68.9 bits (168), Expect = 1e-13
Identities = 32/170 (18%), Positives = 71/170 (41%), Gaps = 6/170 (3%)
Query: 112 WFHGQLSGKEAE-QLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDF 170
W+ +L+GK+ + K + + +AE+++ ++ +G+FL+RES+S PGDF
Sbjct: 36 WYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDF 95
Query: 171 VLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 230
LSV+ + V H + +F+SL +L+++++ + + +
Sbjct: 96 SLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVP 155
Query: 231 ATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQES---RHLFTRREG 277
V + D + E + G + + + + + G
Sbjct: 156 QQPTYVQALFDFDPQEDGELGFRRG--DFIHVMDNSDPNWWKGACHGQTG 203
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A
2l3q_A 2ggr_A
Length = 304
Score = 74.2 bits (181), Expect = 7e-15
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 21/150 (14%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTG 60
W+ +S EA LL+ G FLVR S ++PGD+ LSV N V+H I ++G
Sbjct: 8 EERSSWYWGRLSRQEAV-ALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSG 66
Query: 61 DCYDLY-----------------GGEKFATLSELVQFYMENQG---QLKKRNQEVIELKY 100
+ G ++F +L L++FY + L + +
Sbjct: 67 PRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGSG 126
Query: 101 PLSCADPTTERWFHGQLSGKEAEQLILQKG 130
+ + +G + E L +KG
Sbjct: 127 VILRQEEAEYVRALFDFNGNDEEDLPFKKG 156
Score = 73.1 bits (178), Expect = 2e-14
Identities = 34/183 (18%), Positives = 56/183 (30%), Gaps = 28/183 (15%)
Query: 106 DPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQS 165
W+ G+LS +EA L LQ ++G FLVR+S +
Sbjct: 7 SEERSSWYWGRLSRQEAVAL------------------------LQGQRHGVFLVRDSST 42
Query: 166 KPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHL 225
PGD+VLSV + +V+H +I + V + S +
Sbjct: 43 SPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRIGDQEFDSLPALLE 102
Query: 226 KQPFNATRITVSNIHDR---VTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDN 282
+ T +A + + L ++G L
Sbjct: 103 FYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVRALFDFNGNDEEDL-PFKKGDILRI 161
Query: 283 RNK 285
R+K
Sbjct: 162 RDK 164
>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine
binding domain, protein tyrosine kinase, signal
transduction, structural genomics; NMR {Homo sapiens}
Length = 118
Score = 63.2 bits (153), Expect = 1e-12
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGE----VTHIKIQNTGD 61
+S +EA++LL G+ L+RPS +++ R V H K++ G
Sbjct: 23 SCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGP 82
Query: 62 CY--DLYGGEKFATLSELVQFYMEN 84
Y D+ +L +V +++ +
Sbjct: 83 KYVIDVEQPFSCTSLDAVVNYFVSH 107
Score = 53.6 bits (128), Expect = 4e-09
Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 10/87 (11%)
Query: 143 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTD----DKVTHVMIRCQAEKY--DVGG 196
EA+ L+ + + G+ L+R S ++ R V H ++ + KY DV
Sbjct: 31 LEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQ 90
Query: 197 GEQFDSLTQLIEHYKRNPMVETSGTVV 223
SL ++ ++ T +V
Sbjct: 91 PFSCTSLDAVVNYFVS----HTKKALV 113
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES;
1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A
2l3t_A 3gxw_A 3gxx_A
Length = 197
Score = 60.3 bits (146), Expect = 9e-11
Identities = 33/221 (14%), Positives = 69/221 (31%), Gaps = 54/221 (24%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRL-NGEVTHIKIQNTGDCYD 64
++ P +G +AE L + G F++R S ++ +L H+ IQ
Sbjct: 10 YYFP-FNGKQAEDYLRSKE-RGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEKENP 67
Query: 65 LY-------GGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQL 117
L G+++ L +++ Y++N + E+ + + G
Sbjct: 68 LALGKVLVVEGQRYHDLDQIIVEYLQN---KIRLLNELTSNEK-----------FKAG-- 111
Query: 118 SGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLV---RESQSKPGDFVLSV 174
+ KE + I N V + PG F L
Sbjct: 112 TKKEVVKFIED----------------------YSKVNPKKSVYYFSLNYENPGWFYLIF 149
Query: 175 --RTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRN 213
+ K+ ++ + + + ++ QL +K
Sbjct: 150 KLNAESKLYIWNVKLTHTGFFL-VNYNYPTVIQLCNGFKTL 189
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 59.1 bits (142), Expect = 2e-09
Identities = 66/476 (13%), Positives = 132/476 (27%), Gaps = 141/476 (29%)
Query: 81 YMENQ-GQLKKRNQEVIE-----LKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGS 134
+M+ + G+ + + ++++ C D + LS +E + +I+ K
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKD--VQDMPKSILSKEEIDHIIMSKD---- 59
Query: 135 FLVRESQSKEAEQLILQKGKNG--SFLVRESQSKPGDFVLS-VRTDDKVTHVMIRCQAE- 190
S + +L K + F V E F++S ++T+ + +M R E
Sbjct: 60 ---AVSGTLRLFWTLLSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQ 115
Query: 191 ------------KYDVGGGEQFDSLTQLIEHYKRNPMVETSG------TV---------- 222
KY+V + + L Q + + V G T
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK 175
Query: 223 VHLKQPFNATRITVSNIH---DRVTELQK-----------ENSSKAGFWEEFESLQQQES 268
V K F + + N + + LQK + + S+Q E
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-EL 234
Query: 269 RHLFTRREGQK----LDN-RNKNRYKNILPFDH-------TRVKLKDVDEDVPGAEYINA 316
R L + + L N +N + F+ TR K V + + A +
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWN---AFNLSCKILLTTRFK--QVTDFLSAATTTHI 289
Query: 317 NYIQSEDG-----GKSYIA-----TQGCLPS---------------------TMNDFWSM 345
+ KS + LP D W
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349
Query: 346 VWQENV-RVIVMTTKEMERGKNKCAKYW-----PDDHQ--SKTYGAVCVNNMYESVTTDY 397
V + + +I + +E + + + P + + + + V
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYR-KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV--MV 406
Query: 398 ILREF----LVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIHA 449
++ + LV K + L ++ +H
Sbjct: 407 VVNKLHKYSLVEKQPKEST--ISIP-------------SIYLELKVKLENEYALHR 447
Score = 44.1 bits (103), Expect = 9e-05
Identities = 75/504 (14%), Positives = 138/504 (27%), Gaps = 149/504 (29%)
Query: 40 DFTLSVRLNGEVTHIKIQNTGD--CYDLYGGEKFATL----SELVQFYMENQGQLKKRNQ 93
D S+ E+ HI + L F TL E+VQ ++E ++ + N
Sbjct: 40 DMPKSILSKEEIDHIIMSKDAVSGTLRL-----FWTLLSKQEEMVQKFVE---EVLRINY 91
Query: 94 EVIELKYPLSCADPT-TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQ--LIL 150
+ + P+ R + Q + + K + R + Q L L
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY----NVSRLQPYLKLRQALLEL 147
Query: 151 QKGKN----G------SFLVRES------QSKPGDFV--LSVRTDDKVTHVMIRCQAEKY 192
+ KN G +++ + Q K + L+++ + V+ Q Y
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 193 DVGGGEQFD-SLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENS 251
Q D + T +H + + +I + L K
Sbjct: 208 ------QIDPNWTSRSDHSSNIKL-------------------RIHSIQAELRRLLKSKP 242
Query: 252 SK-----------AGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNI------LPF 294
+ A W F L + L T R Q D + +I +
Sbjct: 243 YENCLLVLLNVQNAKAWNAFN-LS---CKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298
Query: 295 DHTRVK------LKDVDEDVP--------------GAEYINA----NYIQSEDGGKSYIA 330
VK L +D+P + + + + K
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI 358
Query: 331 TQGCL----PSTMND-FWSM-VWQENVRV------IV---MTTKEMERGKNKCAKY---- 371
+ L P+ F + V+ + + ++ + ++ NK KY
Sbjct: 359 IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE 418
Query: 372 -WPDDHQSKTYG-----AVCVNNMYE---SVTTDY-ILREFLVSKGSESPRK----IYH- 416
P + V + N Y S+ Y I + F P Y
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF--DSDDLIPPYLDQYFYSH 476
Query: 417 --YHF-QAWPDHGVPSDPGCVLNF 437
+H + L+F
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDF 500
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 56.4 bits (135), Expect = 6e-09
Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 10/136 (7%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVRLNGE---VTHIKI 56
R ++ P +S EA LL E G+FL+R S S PG+++L+VR E V H I
Sbjct: 38 FEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREADEGNAVCHYLI 96
Query: 57 QNTGDCYDLYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTERWFHGQ 116
+ D G A + Q + + L V+ L+ G
Sbjct: 97 ERGEPKED---GTAAAGVKIANQSFPDIPALLNHFKMRVLTEASLLAAYKKPIIEVVVGT 153
Query: 117 --LSGKEAEQLILQKG 130
+G+ L ++G
Sbjct: 154 FKFTGERETDLPFEQG 169
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC,
gtpas activation, metal-binding, phorbol-ester binding,
SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Length = 463
Score = 54.5 bits (131), Expect = 3e-08
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 7 FHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDLY 66
FH IS A+ LL+ +GS+L+R S+ PG +TL++R + + ++ G +
Sbjct: 54 FHGMISREAADQLLIVA--EGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHF--V 109
Query: 67 GGEKFATLSELVQ-----FYMENQGQLKKRNQEVIELKYPLSCAD 106
G ++F ++ +LV Y+E + E I +
Sbjct: 110 GEKRFESIHDLVTDGLITLYIETKA------AEYIAKMTINPIYE 148
Score = 39.5 bits (92), Expect = 0.002
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 143 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTH 182
+ A+QL++ GS+L+RESQ +PG + L++R + +
Sbjct: 61 EAADQLLI--VAEGSYLIRESQRQPGTYTLALRFGSQTRN 98
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 52.1 bits (124), Expect = 4e-08
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 12/96 (12%)
Query: 1 MSSRRWFHPSISGVEAEVLLLERGY-DGSFLVRPSRSNPGDFTLSVR---LNGEVTHIKI 56
R ++ P +S EA LL E G+FL+R S S PG+++L+VR V H I
Sbjct: 9 FEWRSFYFPGMSREEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREADEGNAVCHYLI 67
Query: 57 QNTGDCYDLY-------GGEKFATLSELVQFYMENQ 85
+ D + F + L+ +
Sbjct: 68 ERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRV 103
Score = 47.9 bits (113), Expect = 1e-06
Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 33/119 (27%)
Query: 109 TERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPG 168
++ +S +EA +L+ + G+FL+R+S S+PG
Sbjct: 11 WRSFYFPGMSREEAHKLLGEPQV----------------------SIGTFLMRDS-SRPG 47
Query: 169 DFVLSVRTDDKVTHV--MIRCQAEKYDVG--------GGEQFDSLTQLIEHYKRNPMVE 217
++ L+VR D+ V + + E + G + F + L+ H+K + E
Sbjct: 48 EYSLTVREADEGNAVCHYLIERGEPKEDGTAAAGVKIANQSFPDIPALLNHFKMRVLTE 106
>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal
transduction, transducer, transcription factor; HET:
PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1
b.2.5.5 d.93.1.1 PDB: 1uus_A*
Length = 473
Score = 40.0 bits (92), Expect = 0.001
Identities = 15/113 (13%), Positives = 34/113 (30%), Gaps = 8/113 (7%)
Query: 111 RWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDF 170
WF + ++ I + G ++ LQ G+F++R S+ PG F
Sbjct: 330 VWFGKSMQTLRYQRHISTLWQEGIIY--GYMGRQEVNDALQNQDPGTFIIRFSERNPGQF 387
Query: 171 VLSVRTDDKVTHVMIRCQAEKYDVGGG-----EQFDSLTQLIEHYKRNPMVET 218
++ + + + D + +Q + +
Sbjct: 388 GIAYIGVEMPARIKH-YLVQPNDTAAAKKTFPDFLSEHSQFVNLLQWTKDTNG 439
Score = 38.4 bits (88), Expect = 0.005
Identities = 14/97 (14%), Positives = 29/97 (29%), Gaps = 4/97 (4%)
Query: 5 RWFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYD 64
+ + E L + G+F++R S NPG F ++ IK
Sbjct: 352 GIIYGYMGRQEVNDALQNQD-PGTFIIRFSERNPGQFGIAYIGVEMPARIKHYL---VQP 407
Query: 65 LYGGEKFATLSELVQFYMENQGQLKKRNQEVIELKYP 101
T + + + + L+ ++
Sbjct: 408 NDTAAAKKTFPDFLSEHSQFVNLLQWTKDTNGAPRFL 444
Score = 36.5 bits (83), Expect = 0.015
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Query: 98 LKYPLSCADPTTERWFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKNGS 157
L+Y + E +G + +E LQ G+F++R S+ + I G
Sbjct: 339 LRYQRHISTLWQEGIIYGYMGRQEVNDA-LQNQDPGTFIIRFSERNPGQFGIAYIGVEMP 397
Query: 158 FLVRESQSKPGDFVLSVRT 176
++ +P D + +T
Sbjct: 398 ARIKHYLVQPNDTAAAKKT 416
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 37.1 bits (86), Expect = 0.004
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Query: 379 KTYGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFL 438
+ G V + E + + + H PD GVPSD L +
Sbjct: 25 RKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHI-PIPDGGVPSDSQF-LTIM 82
Query: 439 YEVNTRQ 445
+ + +
Sbjct: 83 KWLLSEK 89
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.3 bits (86), Expect = 0.013
Identities = 50/340 (14%), Positives = 91/340 (26%), Gaps = 144/340 (42%)
Query: 58 NTGD--CYDLYGG----EKFATLSELVQFYMENQGQLKKRNQEVIELKYPLSCADPTTER 111
G+ ++GG + + EL Y T
Sbjct: 150 GEGNAQLVAIFGGQGNTDDY--FEELRDLY--------------------------QTYH 181
Query: 112 WFHGQLSGKEAEQLILQKGKNGSFLVRESQSKEAEQLILQKGKN-GSFLVRESQSKPGDF 170
G L AE L S L+R + E + +G N +L S + D+
Sbjct: 182 VLVGDLIKFSAETL--------SELIRTTLDAEK---VFTQGLNILEWLENPSNTPDKDY 230
Query: 171 VLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKR-------NP---MVETSG 220
+LS+ ++ +I + QL HY P G
Sbjct: 231 LLSI----PISCPLI----------------GVIQLA-HYVVTAKLLGFTPGELRSYLKG 269
Query: 221 TVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLF---TRREG 277
H + A I ++ WE F ++ LF R
Sbjct: 270 ATGHSQGLVTAVAI-----------------AETDSWESFFVSVRKAITVLFFIGVR--C 310
Query: 278 QKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPS 337
+ + +T + +++ S + +G +PS
Sbjct: 311 YEA-------------YPNTSLPPSILED--------------SLENN------EG-VPS 336
Query: 338 TMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQ 377
M + + +T ++++ NK + P Q
Sbjct: 337 PM-----------LSISNLTQEQVQDYVNKTNSHLPAGKQ 365
Score = 32.3 bits (73), Expect = 0.44
Identities = 56/362 (15%), Positives = 94/362 (25%), Gaps = 143/362 (39%)
Query: 125 LILQKGK-NGSFLVRESQSKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHV 183
L L G LV + A QL F + +P + DD+ T
Sbjct: 9 LTLSHGSLEHVLLVPTASFFIASQL------QEQFN--KILPEPTE---GFAADDEPTTP 57
Query: 184 ---------MIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRI 234
+ E VG QFD + L L + F +
Sbjct: 58 AELVGKFLGYVSSLVEPSKVG---QFDQVLNLC-----------------LTE-FENCYL 96
Query: 235 TVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRN-KNRYKNILP 293
++IH +L +EN + ++ ++ T R + R + + L
Sbjct: 97 EGNDIHALAAKLLQENDTT-------LVKTKELIKNYITARI---MAKRPFDKKSNSAL- 145
Query: 294 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 353
+ V E G + A + GG QG +D++
Sbjct: 146 -------FRAVGE---GNAQLVAIF-----GG------QG----NTDDYF---------- 170
Query: 354 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYI------LREFLVSKG 407
+E+ Y Y + D I L E +
Sbjct: 171 -----EEL----------------RDLY------QTYHVLVGDLIKFSAETLSEL--IRT 201
Query: 408 SESPRKIYH--YHFQAW---PDHGVPSDP-------GCVLNFL-----YEVNTRQ-DIHA 449
+ K++ + W P + P C L + Y V +
Sbjct: 202 TLDAEKVFTQGLNILEWLENPSN-TPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTP 260
Query: 450 GN 451
G
Sbjct: 261 GE 262
>1y1u_A Signal transducer and activator of transcription; STAT,
DNA-binding, SH2 domain, transcription REGU signaling
protein; 3.21A {Mus musculus}
Length = 585
Score = 34.0 bits (77), Expect = 0.12
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 201
+K+ +L +G+FL+R S S+ G ++ + D ++ D
Sbjct: 472 NKQQAHDLLINKPDGTFLLRFSDSEIGGITIAWKFDSPDRNLWNLKPFTTRDF----SIR 527
Query: 202 SLTQLIEHY 210
SL +
Sbjct: 528 SLADRLGDL 536
>1ust_A Histone H1; DNA binding protein, linker histone, DNA binding
domain, winged helix fold; NMR {Saccharomyces
cerevisiae} SCOP: a.4.5.13
Length = 93
Score = 29.5 bits (66), Expect = 0.55
Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 96 IELKYPLSCADPTTERWFHGQL-SGKEAEQLILQKGKNGSFLVRESQSKEAEQ 147
I+ YP+ + + +F+ + G EA KG G+ + + +S E ++
Sbjct: 36 IKENYPIVGSASNFDLYFNNAIKKGVEAGDFEQPKGPAGAVKLAKKKSPEVKK 88
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 125
Score = 30.2 bits (68), Expect = 0.56
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 12 SGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIK 55
S V+ + GY + PG++ +SV+ G HI
Sbjct: 62 SKVKMDCQETPEGYKVMYTPMA----PGNYLISVKYGGP-NHIV 100
>1uhm_A Histone H1, histone HHO1P; winged helix-turn-helix, linker histone,
riken structural genomics/proteomics initiative, RSGI;
NMR {Saccharomyces cerevisiae} SCOP: a.4.5.13
Length = 78
Score = 28.6 bits (64), Expect = 0.80
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 96 IELKYPLSCADPTTERWFHGQL-SGKEAEQLILQKGKNGSF 135
I+ YP+ + + +F+ + G EA KG G+
Sbjct: 33 IKENYPIVGSASNFDLYFNNAIKKGVEAGDFEQPKGPAGAV 73
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A
{Streptomyces coelicolor}
Length = 343
Score = 30.8 bits (69), Expect = 0.83
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 6 WFHPSISGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIKIQNTGDCYDL 65
+H + G E + G G +VR D T ++ N + + +TG ++
Sbjct: 154 HYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVLPDATHTIVFNDMTINNRKPHTGPDFEA 213
Query: 66 YGGEKFATLSELVQFYMENQGQ 87
G++ V+ M G+
Sbjct: 214 TVGDR-------VEIVMITHGE 228
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces
cerevisiae}
Length = 1219
Score = 31.0 bits (70), Expect = 0.89
Identities = 19/120 (15%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKV-THVMIRCQAEKYDVG----- 195
++AE L+ + G F++R+S V++ + D + H+ I+ ++ +
Sbjct: 1032 GRQAEDY-LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLALGKVL 1090
Query: 196 --GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSK 253
++++ L Q+I Y V + ++ + T+ ++ + + + N +K
Sbjct: 1091 IVDNQKYNDLDQIIVEYL-QNKVRLLNEMTSSEKFKSGTK---KDVVKFIEDYSRVNPNK 1146
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A
{Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Length = 138
Score = 29.1 bits (65), Expect = 1.7
Identities = 8/44 (18%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 12 SGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIK 55
S V+ + G+ ++ PG++ ++++ G HI
Sbjct: 86 SKVQLDCRECPEGHVVTYTPM----APGNYLIAIKYGGPQ-HIV 124
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain,
structural protein; 2.80A {Dictyostelium discoideum}
SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Length = 311
Score = 29.6 bits (65), Expect = 1.9
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 26 DGSFLVRPSRSNPGDFTLSVRLNGEVTHIK 55
DG++ S G F+ V+LNG+ HI+
Sbjct: 256 DGTYTAAYSLVGNGRFSTGVKLNGK--HIE 283
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 29.4 bits (65), Expect = 1.9
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 12/68 (17%)
Query: 242 RVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLD-NRNKNRYKNILPFDHTRVK 300
R+ EL + W E + ++ + +R+ ++++ N+ NR +
Sbjct: 97 RLQELDAASKVMEQEWRE----KAKKDLEEWNQRQSEQVEKNKINNR-------IADKAF 145
Query: 301 LKDVDEDV 308
+ D D+
Sbjct: 146 YQQPDADI 153
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 105
Score = 28.2 bits (63), Expect = 2.2
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 10 SISGV-EAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIK 55
++ G +AE+ + +GS V PG++ +S++ N E HI
Sbjct: 47 AVEGPSKAEITFDDHK-NGSCGVSYIAQEPGNYEVSIKFNDE--HIP 90
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched
library, clone:9530076O17...; SH3_1 domain; NMR {Mus
musculus}
Length = 109
Score = 27.8 bits (62), Expect = 2.8
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 104 CADPTTERWFHGQLSGKEAEQLILQ 128
E W+ G++ K+AE
Sbjct: 84 ADSIQAEEWYFGKMGRKDAESGPSS 108
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex,
phosphoprotein, disease mutation, immunoglobulin like,
zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10
PDB: 2brq_A* 2jf1_A 3isw_A
Length = 94
Score = 27.4 bits (61), Expect = 3.0
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 16 AEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIK 55
AE+ +R DGS V PGD+ +SV+ N E HI
Sbjct: 46 AEISFEDRK-DGSCGVAYVVQEPGDYEVSVKFNEE--HIP 82
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex,
cytokine activation, complex (transcription factor/DNA),
transcription/DNA complex; HET: DNA PTR; 2.25A {Mus
musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Length = 596
Score = 29.0 bits (64), Expect = 3.8
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 142 SKEAEQLILQKGKNGSFLVRES-QSKPGDFVLSVRTDDKVTHVMIR 186
SKE E+ IL G+FL+R S SK G + D I+
Sbjct: 464 SKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQ 509
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation,
actin-binding, cytoplasm, cytoskeleton, disease
mutation, phosphoprotein; 1.65A {Homo sapiens}
Length = 89
Score = 27.0 bits (60), Expect = 4.4
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 12 SGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIK 55
E+L+ G + V + G++TL V+ E HI
Sbjct: 40 RTPCEEILVKHVG-SRLYSVSYLLKDKGEYTLVVKWGHE--HIP 80
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
SCOP: b.1.18.10
Length = 116
Score = 27.5 bits (61), Expect = 4.5
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 12 SGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIK 55
SG + LL + + G+ +S++ NG H+
Sbjct: 55 SGRDEPCLLKRLP-NNHIGISFIPREVGEHLVSIKKNGN--HVA 95
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
SCOP: b.1.18.10
Length = 93
Score = 27.0 bits (60), Expect = 5.0
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 12 SGVEAEVLLLERGYDGSFLV--RPSRSNPGDFTLSVRLNGEVTHIK 55
SG A + + DG+ V P+ G + ++ +G HI
Sbjct: 32 SGKTARPNITDNK-DGTITVRYAPTE--KGLHQMGIKYDGN--HIP 72
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
SCOP: b.1.18.10
Length = 113
Score = 27.0 bits (60), Expect = 5.3
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 12 SGVEAEVLLLERGYDGSFLVRPSRSNPGDFTLSVRLNGEVTHIK 55
SG +AEV + DG++ V G +TL+++ GE +
Sbjct: 52 SGTKAEVSIQNNK-DGTYAVTYVPLTAGMYTLTMKYGGE--LVP 92
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta;
complex (SH2 domain/DNA), SH2 domain, transcription
factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP:
a.47.1.1 b.2.5.5 d.93.1.1
Length = 575
Score = 27.9 bits (61), Expect = 9.0
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 142 SKEAEQLILQKGKNGSFLVRESQS-KPGDFVLS-VRTDDKVTHVMI 185
SKE E+ +L+ + G+FL+R S+S + G + V
Sbjct: 448 SKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDF 493
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.267 0.0533 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,821,173
Number of extensions: 396251
Number of successful extensions: 1621
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1092
Number of HSP's successfully gapped: 226
Length of query: 451
Length of database: 6,701,793
Length adjustment: 97
Effective length of query: 354
Effective length of database: 3,993,456
Effective search space: 1413683424
Effective search space used: 1413683424
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.0 bits)