Query psy8517
Match_columns 614
No_of_seqs 545 out of 3042
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 20:57:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8517.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8517hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0790|consensus 100.0 4.2E-81 9.1E-86 629.6 19.7 369 207-579 41-470 (600)
2 KOG4228|consensus 100.0 5.7E-58 1.2E-62 511.0 17.2 349 46-572 675-1030(1087)
3 PHA02742 protein tyrosine phos 100.0 1.5E-43 3.2E-48 365.9 18.9 184 359-547 25-210 (303)
4 PHA02747 protein tyrosine phos 100.0 5.9E-43 1.3E-47 362.6 18.3 200 340-547 9-211 (312)
5 PHA02740 protein tyrosine phos 100.0 5.6E-43 1.2E-47 359.1 16.4 179 358-547 23-205 (298)
6 KOG0792|consensus 100.0 1E-42 2.2E-47 384.2 17.4 250 346-605 855-1109(1144)
7 PHA02746 protein tyrosine phos 100.0 5.6E-42 1.2E-46 356.6 19.2 188 360-552 25-232 (323)
8 PHA02738 hypothetical protein; 100.0 2.8E-42 6.2E-47 358.3 16.2 183 358-547 23-206 (320)
9 KOG4228|consensus 100.0 2.6E-42 5.7E-47 385.7 15.7 224 339-576 522-746 (1087)
10 smart00194 PTPc Protein tyrosi 100.0 2.1E-39 4.5E-44 329.6 19.6 208 362-577 2-210 (258)
11 KOG0791|consensus 100.0 1.9E-38 4E-43 318.3 13.8 224 339-573 77-300 (374)
12 KOG0790|consensus 100.0 2.8E-39 6E-44 327.0 7.4 361 238-611 3-448 (600)
13 KOG0793|consensus 100.0 3E-38 6.5E-43 333.2 8.9 208 358-573 730-940 (1004)
14 cd00047 PTPc Protein tyrosine 100.0 2.5E-35 5.4E-40 294.8 18.0 178 390-573 1-179 (231)
15 COG5599 PTP2 Protein tyrosine 100.0 3.6E-33 7.8E-38 267.6 14.1 188 383-582 48-240 (302)
16 PF00102 Y_phosphatase: Protei 100.0 5.2E-32 1.1E-36 270.8 16.0 161 388-553 1-166 (235)
17 PRK15375 pathogenicity island 100.0 4.9E-30 1.1E-34 269.5 14.0 175 390-577 298-483 (535)
18 KOG0789|consensus 99.9 1.1E-26 2.4E-31 252.3 14.4 188 382-578 121-317 (415)
19 PHA02740 protein tyrosine phos 99.9 2.3E-28 4.9E-33 251.1 -2.2 135 40-202 153-293 (298)
20 PHA02742 protein tyrosine phos 99.9 1.6E-25 3.5E-30 231.6 -2.6 125 46-200 163-299 (303)
21 PHA02738 hypothetical protein; 99.9 3.8E-25 8.3E-30 230.2 -1.0 131 45-203 159-300 (320)
22 PHA02747 protein tyrosine phos 99.9 4.7E-25 1E-29 228.9 -1.7 133 41-200 159-302 (312)
23 PHA02746 protein tyrosine phos 99.9 1.8E-24 4E-29 225.3 -1.0 124 46-199 182-316 (323)
24 KOG0792|consensus 99.8 4E-22 8.6E-27 221.8 0.2 123 47-199 1009-1132(1144)
25 KOG0791|consensus 99.8 3.1E-21 6.8E-26 194.4 1.3 120 54-199 237-356 (374)
26 COG5599 PTP2 Protein tyrosine 99.8 8.8E-21 1.9E-25 182.7 -0.6 125 50-198 170-295 (302)
27 smart00194 PTPc Protein tyrosi 99.8 3.8E-20 8.2E-25 188.2 -1.2 120 45-194 137-257 (258)
28 cd00047 PTPc Protein tyrosine 99.7 6.2E-20 1.3E-24 183.5 -2.9 120 45-194 109-230 (231)
29 smart00404 PTPc_motif Protein 99.7 2.4E-18 5.1E-23 149.5 0.8 100 68-194 1-104 (105)
30 smart00012 PTPc_DSPc Protein t 99.7 2.4E-18 5.1E-23 149.5 0.8 100 68-194 1-104 (105)
31 PF00017 SH2: SH2 domain; Int 99.7 2.1E-16 4.5E-21 129.8 9.4 76 241-316 1-77 (77)
32 cd00173 SH2 Src homology 2 dom 99.7 3.1E-16 6.8E-21 133.9 10.1 92 241-335 2-94 (94)
33 PRK15375 pathogenicity island 99.6 3.3E-17 7.1E-22 173.2 0.7 104 64-198 418-531 (535)
34 smart00252 SH2 Src homology 2 99.6 1.1E-15 2.4E-20 127.7 9.5 80 241-321 3-83 (84)
35 KOG0793|consensus 99.6 3.7E-16 8E-21 166.7 8.1 118 55-204 881-1002(1004)
36 KOG4226|consensus 99.6 7.9E-16 1.7E-20 147.9 9.4 100 236-336 278-378 (379)
37 PF00102 Y_phosphatase: Protei 99.6 3.6E-17 7.8E-22 163.4 -1.6 121 45-195 113-235 (235)
38 KOG0789|consensus 99.5 1.2E-15 2.7E-20 165.8 2.5 105 66-199 261-369 (415)
39 KOG4278|consensus 99.4 2.1E-13 4.5E-18 145.3 8.5 99 234-337 147-246 (1157)
40 KOG1264|consensus 99.3 3.2E-12 7E-17 138.8 8.8 100 241-341 535-645 (1267)
41 KOG4637|consensus 99.3 5.1E-12 1.1E-16 126.8 6.4 98 240-337 23-121 (464)
42 KOG4637|consensus 99.2 9.1E-12 2E-16 125.0 6.8 107 230-338 323-431 (464)
43 KOG0197|consensus 99.2 3.2E-11 7E-16 128.3 8.7 110 224-337 66-185 (468)
44 KOG2996|consensus 99.2 1.5E-11 3.3E-16 129.6 4.9 104 234-338 680-784 (865)
45 KOG4792|consensus 99.2 7.2E-11 1.6E-15 111.3 7.8 101 232-339 4-112 (293)
46 KOG1264|consensus 99.0 3.1E-10 6.6E-15 123.8 7.4 97 237-339 646-742 (1267)
47 PTZ00242 protein tyrosine phos 98.9 3.7E-10 8.1E-15 106.6 -0.2 95 69-193 59-155 (166)
48 KOG0194|consensus 98.8 1E-08 2.3E-13 110.7 8.9 101 241-345 50-157 (474)
49 KOG1720|consensus 98.5 6.1E-08 1.3E-12 91.6 3.5 62 104-194 145-206 (225)
50 KOG3601|consensus 98.5 2.4E-08 5.2E-13 94.2 0.2 81 238-320 57-138 (222)
51 PTZ00393 protein tyrosine phos 98.3 8.7E-08 1.9E-12 93.9 -0.7 60 102-192 166-225 (241)
52 cd00127 DSPc Dual specificity 98.1 6.7E-07 1.4E-11 81.7 1.1 64 97-189 72-135 (139)
53 smart00195 DSPc Dual specifici 97.9 5.3E-06 1.2E-10 75.8 2.4 65 96-189 68-132 (138)
54 KOG1930|consensus 97.9 2.8E-05 6E-10 80.4 7.7 80 240-320 213-310 (483)
55 COG2453 CDC14 Predicted protei 97.9 7.1E-06 1.5E-10 78.7 3.0 72 95-194 94-165 (180)
56 PF00782 DSPc: Dual specificit 97.7 8.5E-06 1.8E-10 73.9 0.8 68 95-191 62-129 (133)
57 KOG3697|consensus 97.3 0.00019 4.2E-09 70.8 3.8 95 239-337 200-343 (345)
58 smart00404 PTPc_motif Protein 97.2 0.00041 9E-09 59.5 4.2 34 576-609 1-34 (105)
59 smart00012 PTPc_DSPc Protein t 97.2 0.00041 9E-09 59.5 4.2 34 576-609 1-34 (105)
60 KOG3751|consensus 97.0 0.00037 8.1E-09 74.2 2.5 88 233-320 513-606 (622)
61 PF14633 SH2_2: SH2 domain; PD 96.8 0.0036 7.8E-08 61.4 7.1 76 241-317 39-122 (220)
62 PRK12361 hypothetical protein; 96.5 0.0014 3.1E-08 74.0 2.7 68 95-190 164-231 (547)
63 KOG2836|consensus 96.1 0.00067 1.5E-08 59.8 -1.9 53 106-189 97-149 (173)
64 KOG1718|consensus 95.7 0.0036 7.9E-08 57.6 0.6 35 95-129 83-117 (198)
65 PF05706 CDKN3: Cyclin-depende 95.4 0.0056 1.2E-07 57.0 0.9 32 95-126 122-153 (168)
66 KOG1719|consensus 94.4 0.037 8.1E-07 50.4 3.3 72 94-198 97-168 (183)
67 KOG4566|consensus 93.7 0.089 1.9E-06 52.8 4.7 78 241-319 53-138 (258)
68 KOG1716|consensus 93.0 0.037 7.9E-07 57.2 0.8 38 95-132 144-181 (285)
69 PF13350 Y_phosphatase3: Tyros 92.7 0.06 1.3E-06 50.7 1.8 25 106-130 124-148 (164)
70 KOG1717|consensus 92.1 0.051 1.1E-06 53.8 0.6 57 73-131 219-276 (343)
71 PF03162 Y_phosphatase2: Tyros 92.0 0.054 1.2E-06 51.0 0.6 29 104-132 89-117 (164)
72 PF14633 SH2_2: SH2 domain; PD 90.9 0.48 1E-05 46.6 5.9 90 228-318 106-218 (220)
73 PF14566 PTPlike_phytase: Inos 90.9 0.057 1.2E-06 50.1 -0.6 29 102-130 120-148 (149)
74 TIGR01244 conserved hypothetic 90.9 0.15 3.2E-06 46.4 2.2 22 105-127 85-106 (135)
75 COG5350 Predicted protein tyro 88.9 0.24 5.2E-06 45.2 1.8 22 102-123 89-110 (172)
76 KOG2283|consensus 85.0 0.43 9.3E-06 51.8 1.5 32 105-136 106-137 (434)
77 KOG1856|consensus 84.6 1.2 2.5E-05 52.7 4.8 76 241-317 1109-1192(1299)
78 COG2365 Protein tyrosine/serin 83.7 0.67 1.4E-05 46.8 2.1 28 106-133 136-163 (249)
79 PTZ00242 protein tyrosine phos 83.5 0.77 1.7E-05 43.4 2.3 34 432-465 16-49 (166)
80 KOG1856|consensus 83.5 2.7 5.8E-05 49.9 7.0 90 229-319 1177-1287(1299)
81 KOG4471|consensus 79.0 1.2 2.5E-05 49.2 2.0 29 102-130 370-398 (717)
82 PLN02727 NAD kinase 70.6 2.9 6.2E-05 49.1 2.5 25 105-129 340-364 (986)
83 PF02762 Cbl_N3: CBL proto-onc 64.6 22 0.00048 28.6 5.6 36 250-285 13-49 (86)
84 PF04273 DUF442: Putative phos 63.1 2.7 5.8E-05 36.8 0.3 22 105-127 85-106 (110)
85 PTZ00393 protein tyrosine phos 56.2 6.2 0.00013 39.3 1.5 35 431-465 91-125 (241)
86 PF06602 Myotub-related: Myotu 45.3 10 0.00023 40.3 1.3 26 104-129 229-254 (353)
87 KOG1572|consensus 43.5 12 0.00027 36.9 1.4 29 104-132 146-174 (249)
88 PF02061 Lambda_CIII: Lambda P 39.2 32 0.0007 24.1 2.4 26 578-603 1-26 (45)
89 KOG1089|consensus 36.3 21 0.00046 39.9 1.9 25 105-129 343-367 (573)
90 KOG3508|consensus 34.8 16 0.00034 43.1 0.7 59 235-293 77-136 (932)
91 smart00557 IG_FLMN Filamin-typ 30.1 61 0.0013 27.0 3.4 28 258-285 52-79 (93)
92 PF00630 Filamin: Filamin/ABP2 28.8 50 0.0011 27.6 2.7 26 260-285 68-93 (101)
93 KOG1785|consensus 28.6 1E+02 0.0022 32.8 5.2 36 250-285 267-303 (563)
94 COG3723 RecT Recombinational D 27.9 31 0.00067 34.3 1.3 33 13-45 156-196 (276)
95 PF02061 Lambda_CIII: Lambda P 25.0 93 0.002 21.9 2.8 24 522-545 2-25 (45)
No 1
>KOG0790|consensus
Probab=100.00 E-value=4.2e-81 Score=629.65 Aligned_cols=369 Identities=64% Similarity=1.014 Sum_probs=336.4
Q ss_pred hhhhhhhcccccccC----CcccccCCCcccCChhhhh---------------------------------hhcccCCch
Q psy8517 207 EQKSIQLGREYTNIR----CDCYDLYGGEKFATLSELV---------------------------------QFYMENQGK 249 (614)
Q Consensus 207 ~~~s~~~~~~~~~~~----~~~~~~~~~~~~~~~~e~~---------------------------------~~y~~~~~~ 249 (614)
..++++.+.+.+||+ |++|+.|+||+|+++.|++ |||+.+++.
T Consensus 41 fsl~~r~~~~v~hikiq~~~~~~~l~~gekfat~~ELvqyyme~~~~lkekng~~ielK~pl~cAdptserWfHG~Lsgk 120 (600)
T KOG0790|consen 41 FSLSVRRGDKVTHIKIQNSGDFYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGK 120 (600)
T ss_pred eeEEEEeCCceEEEEEeecCccccccCCccccchHHHHHHHHhhhHHHHhcCCCEEEecCCCccCCchhhhhhccCCCch
Confidence 336788899999999 8899999999999999887 666667788
Q ss_pred HHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCC---------eEEEEEEeecCCeeecCCCccccCHHHHHHhcccCC
Q psy8517 250 EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDD---------KVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNP 320 (614)
Q Consensus 250 eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~---------~v~h~~I~~~~~~~~~~~~~~F~sl~eLV~~y~~~~ 320 (614)
+||+||+..+++|+||||+|.|.||+|+||+++++ +|+|++|.|.+++|+++|++.|+|+.+||+||+++|
T Consensus 121 eAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGgge~F~sltdLidhykknp 200 (600)
T KOG0790|consen 121 EAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGGGERFDSLTDLVEHYKKNP 200 (600)
T ss_pred hHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecccccccCCccccchHHHHHHHhccCc
Confidence 99999999999999999999999999999999988 999999999999999999999999999999999999
Q ss_pred eecccCeEEEecCCcccccccccccchHHHHHhhccC----CCCcchHHHHHHhhhcccccccccccccccccCCCCCCC
Q psy8517 321 MVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENS----SKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKN 396 (614)
Q Consensus 321 l~~~~g~~~~L~~P~~~t~~~~~~l~~~~~~l~~~~~----~~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~ 396 (614)
+.+..|.++.|++|++.|++++..+..|+.+|.+... .+.||++||++|++.+....+++.++.+++|+.||||.|
T Consensus 201 mvEt~gtvv~LrqP~naTrI~Aa~i~~Rve~l~k~~e~~d~~k~GfwEEFesLqq~~~~~~~sr~EG~r~eN~~KNRYkN 280 (600)
T KOG0790|consen 201 MVETLGTVVYLRQPLNATRINAADIENRVEELNKKQESEDTAKAGFWEEFESLQQQEVKNLHSRLEGQRPENKGKNRYKN 280 (600)
T ss_pred hhhhcceeEEeeccccccchhhhhHHHHHHHHhccccchhhhhcchhHHHHHhhhhhhHhhhhhhccccchhhccccccc
Confidence 9999999999999999999999999999999987532 789999999999998888888999999999999999999
Q ss_pred CCCCCCcceeecCCCCCCCCCceeeeeeeccC--------CCCceEEEecCCCCCchhhhhcceeccccceEEeeccccc
Q psy8517 397 ILPFDHTRVKLKDVDEDVPGAEYINANYIQSE--------DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEME 468 (614)
Q Consensus 397 i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~--------~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e 468 (614)
|+|||||||+|...+++.+++||||||||-.- ..++.||||||-|.+|+.|||+||||+|+++|||.|.+.|
T Consensus 281 IlPfDHtRViL~d~~~n~pgsdYINAnyi~~~~q~~~~~~~~kKsyIAtQGCL~nTVnDFW~MvwQENsrVIVMtTkE~E 360 (600)
T KOG0790|consen 281 ILPFDHTRVILQDRDPNIPGSDYINANYIMIEFQRLCNNSKPKKSYIATQGCLQNTVNDFWRMVWQENSRVIVMTTKEVE 360 (600)
T ss_pred cCcccceeeEeecCCCCCccchhcccchhhhhhhhccCccccccceeehhhHHHHHHHHHHHHHHhccceEEEEehhhhh
Confidence 99999999999999899999999999998533 2346899999999999999999999999999999999999
Q ss_pred cCcccccccCCCCCCCeeeecEEEEeEEEeeecCEEEEEEEEEeCC--CCceEEEEeeecCCCCCCCCCChHHHHHHHHH
Q psy8517 469 RGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGS--ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYE 546 (614)
Q Consensus 469 ~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~~--~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~ 546 (614)
+|++||.+|||+++....||.+.|++.++....+|++|+|.++... ...|.|+||||..|||||+|.+|+++|+|+.+
T Consensus 361 RgK~KC~~YWPee~~~e~~G~~~v~~v~E~~t~dY~LR~l~vs~~~~g~~~R~I~~yh~~tWPDHGvP~dPg~vLnFLe~ 440 (600)
T KOG0790|consen 361 RGKSKCVKYWPEEGALEEYGVMRVRNVKESDTHDYTLRELKVSKLGNGNLEREIWHYHYLTWPDHGVPSDPGGVLNFLEE 440 (600)
T ss_pred cccccccccCCcccchhhcCceEEEeccccccccceehheeeccccCCcchhhhhhhheeecccCCCcCCccHHHHHHHH
Confidence 9999999999998888889999999999999999999999999543 67999999999999999999999999999999
Q ss_pred Hhhccccccccc-cceeEEEeecCCCCCCceEEE
Q psy8517 547 VCVNNMYESVTT-DYILREFLVSKGSESPRKIYH 579 (614)
Q Consensus 547 V~v~~~~e~~~~-~~ilR~~~~s~~~~~~R~i~h 579 (614)
| +..+++-.. ..|+ .+|+++-|.+.++.=
T Consensus 441 V--~~rq~~l~~AgpIv--VHCSAGIGrTGTfiV 470 (600)
T KOG0790|consen 441 V--NHRQESLMDAGPIV--VHCSAGIGRTGTFIV 470 (600)
T ss_pred h--hhhhccccccCcEE--EEccCCcCCcceEEE
Confidence 9 776665322 2333 378888876665543
No 2
>KOG4228|consensus
Probab=100.00 E-value=5.7e-58 Score=511.01 Aligned_cols=349 Identities=30% Similarity=0.514 Sum_probs=275.2
Q ss_pred hHHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHH--hhh--cCCCEEEeccCCcCCcc
Q psy8517 46 YTYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILD--QIK--KHGPVVVHCSAGIGRTG 121 (614)
Q Consensus 46 ~~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~--~~~--~~~pv~VHCs~GvgRsg 121 (614)
..|++-.+.|.. ......|.|.|||||+||+++.+....+. +..+.+ ... ..||+|||||||+||||
T Consensus 675 a~y~iRtf~l~~---~g~~~~R~v~qfhFt~Wpd~gvPe~~t~l------L~f~rrvk~~~p~~aGPiVVHCSAGvGRTG 745 (1087)
T KOG4228|consen 675 AEYGIRTFALKK---QGENPKREVRQFHFTAWPDHGVPETPTGL------LKFRRRVKTFNPPDAGPIVVHCSAGVGRTG 745 (1087)
T ss_pred ccceEEeeeccc---cCCCCCceeeeeeeccCCCCCCcccchHH------HHHHHHhccCCCcCCCCEEEECCCCCCCcc
Confidence 456666666664 24566999999999999988776555442 122222 222 56999999999999999
Q ss_pred eeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHHHHHHHHh
Q psy8517 122 TFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLS 201 (614)
Q Consensus 122 ~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~~~i~~~~ 201 (614)
+|++||.+++++.+++ .+++++.|..||.||..||||.+||.|||+|++++...
T Consensus 746 ~fi~iDaml~~~~~e~------------------------~vdiy~~v~~lR~QR~~mVQt~eQYiFi~~AllE~~~~-- 799 (1087)
T KOG4228|consen 746 CFIVIDAMLDRLECEG------------------------KVDIYGHVKTLRRQRNNMVQTEEQYIFIHEALLEACLC-- 799 (1087)
T ss_pred eEEEeHHHHHHHHhhC------------------------ccceechhHHHHhccccccccHHHHHHHHHHHHHHHhc--
Confidence 9999999999999988 69999999999999999999999999999999888732
Q ss_pred hhhhhhhhhhhhcccccccCCcccccCCCcccCChhhhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEE
Q psy8517 202 QRLIEEQKSIQLGREYTNIRCDCYDLYGGEKFATLSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVR 281 (614)
Q Consensus 202 ~~l~e~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~ 281 (614)
T Consensus 800 -------------------------------------------------------------------------------- 799 (1087)
T KOG4228|consen 800 -------------------------------------------------------------------------------- 799 (1087)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eCCeEEEEEEeecCCeeecCCCccccCHHHHHHhcccCCeecccCeEEEecCCcccccccccccchHHHHHhhcc--CCC
Q psy8517 282 TDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKEN--SSK 359 (614)
Q Consensus 282 ~~~~v~h~~I~~~~~~~~~~~~~~F~sl~eLV~~y~~~~l~~~~g~~~~L~~P~~~t~~~~~~l~~~~~~l~~~~--~~~ 359 (614)
+.|++.+..+..+++.+.+.. .++
T Consensus 800 ------------------------------------------------------G~T~i~~~~~~~~~~~l~~~~p~~~~ 825 (1087)
T KOG4228|consen 800 ------------------------------------------------------GDTEVPASTLAPYSQKLKRIDPPENK 825 (1087)
T ss_pred ------------------------------------------------------CCccccHHHHHHHHHHhccCCCCCCC
Confidence 012222233333333333311 167
Q ss_pred CcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEecC
Q psy8517 360 AGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQG 439 (614)
Q Consensus 360 ~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ~ 439 (614)
+++.+||+.|......... ...|..++|..|||+.+|+|||++||.|.++.+. ++||||||+|+||+.++.|||||+
T Consensus 826 t~le~EF~~L~~~~~~~~~-~~~~~l~~N~~KNR~~~i~P~d~~rv~L~~~~G~--~sdYINAs~idgy~~~~~fivtq~ 902 (1087)
T KOG4228|consen 826 TGLEEEFKTLNSCKPRTRM-MICGNLPENKSKNRQVNILPYDRNRVILIPTHGE--SSDYINASFIDGYRQPKAFIVTQG 902 (1087)
T ss_pred cchHHHHHHHhhccccchh-hhccccchhcccccccccCCchhcccceeccCCC--cccccchhhhcccCCcceEEEecC
Confidence 7999999999875433222 2238999999999999999999999999987654 799999999999999999999999
Q ss_pred CCCCchhhhhcceeccccceEEeeccccccCcccccccCCCCCCCeeeecEEEEeEEEeeecCEEEEEEEEEeCC-CCce
Q psy8517 440 CLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGS-ESPR 518 (614)
Q Consensus 440 Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~~-~~~r 518 (614)
||++|++|||||||+++|.+||||+...+. ++|.+|||. .+...||.+.|+.+.......++.|.|.|++.. +.+|
T Consensus 903 PL~~T~~DFWrmi~d~~~tsiVmL~~l~~~--~~C~qyw~~-~g~~~yg~i~Ve~~~~~~~~~~t~r~f~i~n~~~~~~r 979 (1087)
T KOG4228|consen 903 PLAETVEDFWRMIWDQNVTSIVMLTELKHP--EKCPQYWPP-EGSQRYGPIEVEDMNEHINPQYTAREFGVTNEREKQSR 979 (1087)
T ss_pred CcccchHHHHHHhhccceeEEEEecccCcc--cccccccCC-cCceecCcEEEEecccccchhhhhhhheeeeccccCce
Confidence 999999999999999999999999998776 899999998 457789999999999999999999999999986 8899
Q ss_pred EEEEeeecCCCCCCCCCChHHHHHHHHHHhhccccccccccceeEEEeecCCCC
Q psy8517 519 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSE 572 (614)
Q Consensus 519 ~v~~~~~~~WPd~gvP~~~~~~l~~i~~V~v~~~~e~~~~~~ilR~~~~s~~~~ 572 (614)
+|.||||++||..+.|+.....+.++-.+ .+.+++......++. ++.++.+
T Consensus 980 ~v~qfq~~~WP~~~~~p~~~~~~~~i~~~-~~~~q~~~~~~P~~V--hc~nG~~ 1030 (1087)
T KOG4228|consen 980 TVRQFQFTGWPEYGKPPQSKGPISKIPSV-ASKWQQLGADGPIIV--HCLNGVG 1030 (1087)
T ss_pred EEEEEEecCCcccCcCCCCcchhhhHHHH-HHHHHhhcCCCCEEE--EEcCCCc
Confidence 99999999999998876655555444444 265655543333333 3444443
No 3
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1.5e-43 Score=365.92 Aligned_cols=184 Identities=33% Similarity=0.573 Sum_probs=165.7
Q ss_pred CCcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEec
Q psy8517 359 KAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQ 438 (614)
Q Consensus 359 ~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ 438 (614)
..-+.+||+.|.+.... .++..+..++|..||||.||+|||++||.|+..+ +.+||||||||+|+..+++|||||
T Consensus 25 ~~~i~~E~~~i~~~~~~--~~~~~~~~~~N~~KNRy~~i~~~D~tRV~L~~~~---~~~dYINAsyI~g~~~~~~fIatQ 99 (303)
T PHA02742 25 AEILKEEHEHIMQEIVA--FSCNESLELKNMKKCRYPDAPCFDRNRVILKIED---GGDDFINASYVDGHNAKGRFICTQ 99 (303)
T ss_pred HHHHHHHHHHHhcCCCC--CchhhccChhhhhcCCCCCCCCCCCCEEEeCCCC---CCCCcEEEeeecCCCCCCeEEEEC
Confidence 34566899999765433 3556778899999999999999999999998532 358999999999999889999999
Q ss_pred CCCCCchhhhhcceeccccceEEeeccccccCcccccccCCCC-CCCeeeecEEEEeEEEeeecCEEEEEEEEEeCC-CC
Q psy8517 439 GCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD-HQSKTYGAVCVNNMYESVTTDYILREFLVSKGS-ES 516 (614)
Q Consensus 439 ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~~-~~ 516 (614)
||+++|++|||+||||++|.+|||||+..|.++++|.+|||.+ ++...||.|.|++.+++...+|++++|.+++.+ +.
T Consensus 100 ~Pl~~T~~dFW~MVw~~~~~vIVmLt~~~E~g~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~l~~~~~~~ 179 (303)
T PHA02742 100 APLEETALDFWQAIFQDQVRVIVMITKIMEDGKEACYPYWMPHERGKATHGEFKIKTKKIKSFRNYAVTNLCLTDTNTGA 179 (303)
T ss_pred CCCcccHHHHHHHHhhcCCCeEEEcchhhhCCeeeccccCCCCCCCceEEEEEEEEEEEEEEcCCEEEEEEEEEECCCCc
Confidence 9999999999999999999999999999999999999999964 566789999999999888899999999999864 78
Q ss_pred ceEEEEeeecCCCCCCCCCChHHHHHHHHHH
Q psy8517 517 PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547 (614)
Q Consensus 517 ~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V 547 (614)
+|.|+||||++|||+|+|.++..+++|+..|
T Consensus 180 ~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v 210 (303)
T PHA02742 180 SLDIKHFAYEDWPHGGLPRDPNKFLDFVLAV 210 (303)
T ss_pred eEEEEEEEECCCCCCCcCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999998
No 4
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=5.9e-43 Score=362.56 Aligned_cols=200 Identities=29% Similarity=0.470 Sum_probs=170.9
Q ss_pred ccccccchHHHHHhhccCCCCcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCce
Q psy8517 340 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEY 419 (614)
Q Consensus 340 ~~~~~l~~~~~~l~~~~~~~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dY 419 (614)
.+..+|.+++.+.. ...-+.+||+.+...+... +...+..++|..||||.||+|||++||+|.+.++ ..+||
T Consensus 9 ~~~~~f~~~~~~~~----~~~~i~~E~~~i~~~~~~~--~~~~~~~~~N~~kNRy~di~p~D~sRV~L~~~~~--~~~dY 80 (312)
T PHA02747 9 CRAIDFLKRRNQLN----CFGIIRDEHHQIILKPFDG--LIANFEKPENQPKNRYWDIPCWDHNRVILDSGGG--STSDY 80 (312)
T ss_pred cCHHHHHHHHhCCC----HHHHHHHHHHHHhcCCCCC--hhhhhhCchhhccCCCCCCCCCCCCEeEecCCCC--CCCCc
Confidence 44445544444332 3345678999996554332 3455778999999999999999999999986432 35899
Q ss_pred eeeeeeccCCCCceEEEecCCCCCchhhhhcceeccccceEEeecccc-ccCcccccccCCCC-CCCeeeecEEEEeEEE
Q psy8517 420 INANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEM-ERGKNKCAKYWPDD-HQSKTYGAVCVNNMYE 497 (614)
Q Consensus 420 INAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~-e~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~ 497 (614)
||||||+|+..+++|||||||+++|++|||+||||++|.+|||||+.. |.+++||.+|||.+ ++...+|.|.|++.++
T Consensus 81 INAsyV~g~~~~~~yIaTQ~Pl~~T~~dFW~MVwe~~~~~IVMLt~~~~e~g~~kc~~YWp~~~~~~~~~g~~~V~~~~~ 160 (312)
T PHA02747 81 IHANWIDGFEDDKKFIATQGPFAETCADFWKAVWQEHCSIIVMLTPTKGTNGEEKCYQYWCLNEDGNIDMEDFRIETLKT 160 (312)
T ss_pred EEeeeecCCCCCCeEEEeCCCcchhHHHHHHHHHhccCCEEEEcccccccCCcccccccCCCCCCCCeEeeeEEEEEEEE
Confidence 999999999999999999999999999999999999999999999999 89999999999974 5567799999999999
Q ss_pred eeecCEEEEEEEEEeCC-CCceEEEEeeecCCCCCCCCCChHHHHHHHHHH
Q psy8517 498 SVTTDYILREFLVSKGS-ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547 (614)
Q Consensus 498 ~~~~~~~~r~l~v~~~~-~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V 547 (614)
....+|+.|.|.+++.. +.+|.|+||||++|||+|+|.++..+++|+..|
T Consensus 161 ~~~~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~~~P~~~~~~l~fi~~v 211 (312)
T PHA02747 161 SVRAKYILTLIEITDKILKDSRKISHFQCSEWFEDETPSDHPDFIKFIKII 211 (312)
T ss_pred EecCCeEEEEEEEEECCCCCceEEEEEEECCCCCCCCCCChHHHHHHHHHH
Confidence 88899999999999865 789999999999999999999999999999887
No 5
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=5.6e-43 Score=359.08 Aligned_cols=179 Identities=17% Similarity=0.397 Sum_probs=158.7
Q ss_pred CCCcchHHHHHHhhhcccccccccccccccccCCCC--CCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEE
Q psy8517 358 SKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNR--YKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYI 435 (614)
Q Consensus 358 ~~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR--~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yI 435 (614)
...++.+||+.|....... +...+..++|..||| |.|++|||++||+|.+ ++||||||||+|+..+++||
T Consensus 23 ~~~~i~~E~~~i~~~~~~~--~~~~~~~~~n~~knr~r~~~i~~~D~sRV~L~~------~~~YINAnyVdG~~~~~~fI 94 (298)
T PHA02740 23 LLSCIIKEYRAIVPEHEDE--ANKACAQAENKAKDENLALHITRLLHRRIKLFN------DEKVLDARFVDGYDFEQKFI 94 (298)
T ss_pred HHHHHHHHHHHHhccCccc--hhhhhhchhhhcccccccCCcCCccCceEEecC------CCCcEEEEEecCCCCCCcEE
Confidence 4457889999997654322 456677889999996 5899999999999963 25799999999999999999
Q ss_pred EecCCCCCchhhhhcceeccccceEEeeccccccCccccc-ccCCCCCC-CeeeecEEEEeEEEeeecCEEEEEEEEEeC
Q psy8517 436 ATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCA-KYWPDDHQ-SKTYGAVCVNNMYESVTTDYILREFLVSKG 513 (614)
Q Consensus 436 atQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~-~YwP~~~~-~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~ 513 (614)
|||||+++|++|||+||||++|.+|||||+..| .+|. +|||.+.+ ...||.|.|++.++....+|+.|.|.+++.
T Consensus 95 aTQ~Pl~~T~~dFW~MVwe~~~~iIVMLt~~~e---~kc~~~YWP~~~~~~~~~g~f~V~~~~~~~~~~~~~~~l~l~~~ 171 (298)
T PHA02740 95 CIINLCEDACDKFLQALSDNKVQIIVLISRHAD---KKCFNQFWSLKEGCVITSDKFQIETLEIIIKPHFNLTLLSLTDK 171 (298)
T ss_pred EecCCchhhHHHHHHHHHhcCCCEEEEcccccc---ccccccCCCCCCCCeEEECCEEEEEEEEEecCCEEEEEEEEEcC
Confidence 999999999999999999999999999999876 4799 99998544 467999999999988899999999999876
Q ss_pred CCCceEEEEeeecCCCCCCCCCChHHHHHHHHHH
Q psy8517 514 SESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547 (614)
Q Consensus 514 ~~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V 547 (614)
.+++|.|+||||++|||+|+|.++..+++|+..|
T Consensus 172 ~~~~r~V~Hfqyt~WPd~gvP~~~~~~l~fi~~V 205 (298)
T PHA02740 172 FGQAQKISHFQYTAWPADGFSHDPDAFIDFFCNI 205 (298)
T ss_pred CCCcEEEEEEeecCCCCCCcCCCHHHHHHHHHHH
Confidence 6789999999999999999999999999999988
No 6
>KOG0792|consensus
Probab=100.00 E-value=1e-42 Score=384.23 Aligned_cols=250 Identities=33% Similarity=0.576 Sum_probs=204.1
Q ss_pred chHHHHHhhccCCCCcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeee
Q psy8517 346 HDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYI 425 (614)
Q Consensus 346 ~~~~~~l~~~~~~~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I 425 (614)
.+.+..|.+.. ...+++.||+.|-+.... ..+..|..++|..||||.||+|||.|||.|.+...+ ...|||||+|
T Consensus 855 dks~~~L~~~L-~~g~v~~efE~i~rkkp~--~~~~~a~lpeN~~KNRyrdvlPYD~tRV~L~~~~~~--nagYINAS~i 929 (1144)
T KOG0792|consen 855 DKSCIILAQGL-EDGMVFTEFEQIYRKKPG--MACSIARLPENAPKNRYRDVLPYDDTRVELQPSKDN--NAGYINASHI 929 (1144)
T ss_pred hhHHHHHHhhh-hcCchHHHHHHHhhhCCC--ceeeeccccccccccccCCcCCCcCceeeeccCCCC--Ccccccceee
Confidence 34444444322 456788999999776532 356789999999999999999999999999976543 5679999999
Q ss_pred ccC--CCCceEEEecCCCCCchhhhhcceeccccceEEeeccccccCcccccccCCCC-CCCeeeecEEEEeEEEeeecC
Q psy8517 426 QSE--DGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD-HQSKTYGAVCVNNMYESVTTD 502 (614)
Q Consensus 426 ~g~--~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~~~~~~ 502 (614)
+.. +....|||||||++.|+.|||+|||||++.+|||||.+.|+|+.||.+|||.. .++..||.|.|++..+.....
T Consensus 930 ~ipvgg~e~~YIA~QGPLp~T~~DFWQMVWEQ~~~lIvMlT~e~EggR~KchqYWPr~~~~t~~ygrf~v~~~~~~~t~~ 1009 (1144)
T KOG0792|consen 930 EIPVGGIENRYIACQGPLPHTCTDFWQMVWEQGSTLIVMLTTEVEGGRVKCHQYWPRLGHETMEYGRFQVTCVFEQQTTC 1009 (1144)
T ss_pred EeeecceeEEEEEecCCCcchHHHHHHHHHhcCceEEEEEeehhhcCeeccccccCCCCccceeccceEEEEEEeccccc
Confidence 987 44578999999999999999999999999999999999999999999999987 567889999999999999999
Q ss_pred EEEEEEEEEeCC-CCceEEEEeeecCCCCCCCCCChHHHHHHHHHHhhccccccccccceeEEEeecCCCCCCceEEEE-
Q psy8517 503 YILREFLVSKGS-ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSESPRKIYHY- 580 (614)
Q Consensus 503 ~~~r~l~v~~~~-~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V~v~~~~e~~~~~~ilR~~~~s~~~~~~R~i~h~- 580 (614)
|+.|.+.+.+.. ++.|+|+|+||++|||||+|+++..||+|+++| +..+....+ .++. +|++|.|.+..+.-.
T Consensus 1010 y~tr~m~l~~~~t~eeR~V~hLQYtaWPDHg~P~D~~~FL~Fleev--rsvR~~t~p-Pilv--HCSAGiGRTGVlIl~e 1084 (1144)
T KOG0792|consen 1010 YVTREMTLKDLQTREERTVWHLQYTAWPDHGVPDDPNDFLDFLEEV--RSVRRGTNP-PILV--HCSAGIGRTGVLILME 1084 (1144)
T ss_pred EEEEeEEEeeccCCceeeeeeeeecccccCCCCCChHHHHHHHHHH--HHHhccCCC-CeEE--EccCCCCcceehHHHH
Confidence 999999999986 899999999999999999999999999999999 887776533 4443 688888754422111
Q ss_pred eecccCCCCCCCChhHHHHHHHHHh
Q psy8517 581 HFQAWPDHGVPSDPGCVLNFLYEVN 605 (614)
Q Consensus 581 ~~~~WPDhGvP~~p~~~l~f~~~v~ 605 (614)
--..--+|.-|-+|-.|++-+++=|
T Consensus 1085 ~~l~lle~Ne~vdi~divr~mR~QR 1109 (1144)
T KOG0792|consen 1085 TALCLLEHNEPVDILDIVRTMRDQR 1109 (1144)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 1123346777777776666665543
No 7
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=5.6e-42 Score=356.58 Aligned_cols=188 Identities=23% Similarity=0.430 Sum_probs=163.4
Q ss_pred CcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCC------------------CCCCCceee
Q psy8517 360 AGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDE------------------DVPGAEYIN 421 (614)
Q Consensus 360 ~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~------------------~~~~~dYIN 421 (614)
.-+.+||..+...+... +...+..++|..||||.||+|||++||+|.+... +.+++||||
T Consensus 25 ~~~~~e~~~i~~~~~~~--t~~~~~~~~N~~KNRy~di~p~D~sRV~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~dYIN 102 (323)
T PHA02746 25 EFVLLEHAEVMDIPIRG--TTNHFLKKENLKKNRFHDIPCWDHSRVVINAHESLKMFDVGDSDGKKIEVTSEDNAENYIH 102 (323)
T ss_pred HHHHHHHHHHhcCCCCc--chhhccChhhccccCCCCCCCCcCCEEEecCCCCccccccccccccccccccCCCCCCeEE
Confidence 34558899987765433 4466778999999999999999999999986421 234589999
Q ss_pred eeeeccCCCCceEEEecCCCCCchhhhhcceeccccceEEeeccccccCcccccccCCCCC-CCeeeecEEEEeEEEeee
Q psy8517 422 ANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDH-QSKTYGAVCVNNMYESVT 500 (614)
Q Consensus 422 As~I~g~~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~~-~~~~~g~~~V~~~~~~~~ 500 (614)
||||+|+..+++|||||||+++|++|||+||||+++.+|||||+.. .+..||.+|||.+. ....||.|.|++.+....
T Consensus 103 AsyV~g~~~~~~fIaTQ~Pl~~T~~dFW~MIwe~~v~vIVMLt~~~-e~~~kc~~YWP~~~~~~~~~g~~~V~~~~~~~~ 181 (323)
T PHA02746 103 ANFVDGFKEANKFICAQGPKEDTSEDFFKLISEHESQVIVSLTDID-DDDEKCFELWTKEEDSELAFGRFVAKILDIIEE 181 (323)
T ss_pred EecccCCCCCCeEEEeCCCChhhHHHHHHHHHhhCCCEEEEecccc-cCCccCCCCCCCCCCCCeEEcCEEEEEEEEEEc
Confidence 9999999988999999999999999999999999999999999985 46789999999864 457799999999888888
Q ss_pred cCEEEEEEEEEeCC-CCceEEEEeeecCCCCCCCCCChHHHHHHHHHHhhccc
Q psy8517 501 TDYILREFLVSKGS-ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVCVNNM 552 (614)
Q Consensus 501 ~~~~~r~l~v~~~~-~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V~v~~~ 552 (614)
.+|+.+.|.+++.. +.+|.|+||||++|||+|+|.++..+++|++.| +..
T Consensus 182 ~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v--~~~ 232 (323)
T PHA02746 182 LSFTKTRLMITDKISDTSREIHHFWFPDWPDNGIPTGMAEFLELINKV--NEE 232 (323)
T ss_pred CCeEEEEEEEEECCCCCceEEEEEEECCCCCCCcCCCHHHHHHHHHHH--HHH
Confidence 89999999998865 788999999999999999999999999999998 543
No 8
>PHA02738 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-42 Score=358.35 Aligned_cols=183 Identities=32% Similarity=0.600 Sum_probs=161.6
Q ss_pred CCCcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEe
Q psy8517 358 SKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIAT 437 (614)
Q Consensus 358 ~~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIat 437 (614)
...-+.+||+.|.......++ ..+ ..|..||||.|++|||++||.|+.. ...+||||||||+|+..+++||||
T Consensus 23 ~~~~i~~E~~~i~~~~~~~t~--~~~--~~N~~kNR~~~v~~~d~sRV~L~~~---~~~~dYINAsyVdg~~~~~kfI~T 95 (320)
T PHA02738 23 CEEVITREHQKVISEKVDGTF--NAE--KKNRKLNRYLDAVCFDHSRVILPAE---RNRGDYINANYVDGFEYKKKFICG 95 (320)
T ss_pred HHHHHHHHHHHHhcCCCCcch--hHH--HHhhhhCCCCCcCCCcCCEEEeCCC---CCCCCceEeEEecCCCCCceeEEe
Confidence 345567899998654433322 222 2399999999999999999999743 235899999999999999999999
Q ss_pred cCCCCCchhhhhcceeccccceEEeeccccccCcccccccCCCC-CCCeeeecEEEEeEEEeeecCEEEEEEEEEeCCCC
Q psy8517 438 QGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD-HQSKTYGAVCVNNMYESVTTDYILREFLVSKGSES 516 (614)
Q Consensus 438 Q~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~~~~ 516 (614)
|||+++|++|||+||||++|.+|||||+..|.++++|.+|||.. ++...+|+|.|++.+....++|+.+.|.+++..+.
T Consensus 96 Q~Pl~~T~~dFW~MVwe~~v~~IVmL~~~~E~~~~kc~~YWp~~~~~~~~~g~f~V~~~~~~~~~~~~~~~l~l~~~~~~ 175 (320)
T PHA02738 96 QAPTRQTCYDFYRMLWMEHVQIIVMLCKKKENGREKCFPYWSDVEQGSIRFGKFKITTTQVETHPHYVKSTLLLTDGTSA 175 (320)
T ss_pred cCCChHHHHHHHHHHHHhCCcEEEEeeehhhCCeeeccccCCCCCCCceEeccEEEEEEEEEecCCeEEEEEEEEeCCCC
Confidence 99999999999999999999999999999999999999999975 45678999999999999999999999999987788
Q ss_pred ceEEEEeeecCCCCCCCCCChHHHHHHHHHH
Q psy8517 517 PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547 (614)
Q Consensus 517 ~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V 547 (614)
+|.|+||||++|||+|+|.++..+++|+..|
T Consensus 176 ~r~V~h~~y~~Wpd~gvP~~~~~~l~fi~~V 206 (320)
T PHA02738 176 TQTVTHFNFTAWPDHDVPKNTSEFLNFVLEV 206 (320)
T ss_pred cEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999998
No 9
>KOG4228|consensus
Probab=100.00 E-value=2.6e-42 Score=385.74 Aligned_cols=224 Identities=37% Similarity=0.666 Sum_probs=195.9
Q ss_pred cccccccchHHHHHhhccCCCCcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCc
Q psy8517 339 RITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAE 418 (614)
Q Consensus 339 ~~~~~~l~~~~~~l~~~~~~~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~d 418 (614)
.+.+.+|.+.+.++.+. ..-+|.+||+.|... .+++..+.+.+|..||||.||+|||++||+|..+++ ++.+|
T Consensus 522 pI~v~dl~~~i~~~~~~--~~~~F~~Eyesl~~~----~~~~~~s~~~en~~KNRY~nilayD~sRV~L~~i~G-d~~sD 594 (1087)
T KOG4228|consen 522 PIPVADLLEHIERRKAD--DGYGFKQEYESLPEG----QFTWEHSNKKENKQKNRYENILAYDHSRVILPPIEG-DPNSD 594 (1087)
T ss_pred CccHHHHHHHHHHhhcc--cccchHHHHhhcccc----CCccccCccccccccccCCcchhhhcceeeecccCC-Ccccc
Confidence 46777888888877653 567899999999765 235667889999999999999999999999998864 56799
Q ss_pred eeeeeeeccCCCCceEEEecCCCCCchhhhhcceeccccceEEeeccccccCcccccccCCCCCCCeeeecEEEEeEEEe
Q psy8517 419 YINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYES 498 (614)
Q Consensus 419 YINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~ 498 (614)
|||||||+||..+++|||||||+++|+.||||||||+++.+|||+|++.|.++.||.+||| .++..||++.|++.+.+
T Consensus 595 YINAnyIdGy~e~n~yIaaQgP~~eTv~DFWRMVWEq~S~~IVMvTnl~E~~r~kC~qYWP--~~t~~yGdi~V~~~~~~ 672 (1087)
T KOG4228|consen 595 YINANYIDGYKEPNAYIAAQGPRPETVGDFWRMVWEQKSAGIVMVTNLEEFSRVKCAQYWP--EGTETYGDIKVTLVQTK 672 (1087)
T ss_pred ceeeeeeecccccccceeccCCcccchHHHHHHheeccCCcEEEEecccccccccccccCC--CCccccccccccceeee
Confidence 9999999999999999999999999999999999999999999999999999999999999 45788999999999999
Q ss_pred eecCEEEEEEEEEeCC-CCceEEEEeeecCCCCCCCCCChHHHHHHHHHHhhccccccccccceeEEEeecCCCCCCce
Q psy8517 499 VTTDYILREFLVSKGS-ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSESPRK 576 (614)
Q Consensus 499 ~~~~~~~r~l~v~~~~-~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V~v~~~~e~~~~~~ilR~~~~s~~~~~~R~ 576 (614)
...+|++|+|.+...+ ...|.|+||||++|||+|+|..+.++|.|++.| +........ .++. +|+++.|++..
T Consensus 673 ~~a~y~iRtf~l~~~g~~~~R~v~qfhFt~Wpd~gvPe~~t~lL~f~rrv--k~~~p~~aG-PiVV--HCSAGvGRTG~ 746 (1087)
T KOG4228|consen 673 PLAEYGIRTFALKKQGENPKREVRQFHFTAWPDHGVPETPTGLLKFRRRV--KTFNPPDAG-PIVV--HCSAGVGRTGC 746 (1087)
T ss_pred eeccceEEeeeccccCCCCCceeeeeeeccCCCCCCcccchHHHHHHHHh--ccCCCcCCC-CEEE--ECCCCCCCcce
Confidence 9999999999999876 678999999999999999999999999999999 665533333 3333 67888775443
No 10
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=100.00 E-value=2.1e-39 Score=329.60 Aligned_cols=208 Identities=41% Similarity=0.757 Sum_probs=177.5
Q ss_pred chHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEecCCC
Q psy8517 362 FWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCL 441 (614)
Q Consensus 362 ~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ~Pl 441 (614)
+.+||+.|...... ..+...+..++|..||||.||+|||++||.|.+.++ ..+||||||||+|+..+++||+||+|+
T Consensus 2 ~~~e~~~i~~~~~~-~~~~~~~~~~~n~~kNR~~~v~~~d~~RV~l~~~~~--~~~~YInAs~v~~~~~~~~fI~tQ~P~ 78 (258)
T smart00194 2 LEEEFEKLDRLKPD-DESCTVAARPENRDKNRYKDVLPYDHTRVKLTPPPG--EGSDYINASYIDGPNGPKAYIATQGPL 78 (258)
T ss_pred hHHHHHHhhccCCC-CccccccCCccccccCCCCCCCCCCCCEeEccCCCC--CCCCceeeeeEecCCCccceEEeCCCc
Confidence 56899999765432 124456788999999999999999999999986432 468999999999998889999999999
Q ss_pred CCchhhhhcceeccccceEEeeccccccCcccccccCCCCCCCeeeecEEEEeEEEeeecCEEEEEEEEEeCC-CCceEE
Q psy8517 442 PSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGS-ESPRKI 520 (614)
Q Consensus 442 ~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~~-~~~r~v 520 (614)
++|++|||+||||+++.+||||++..|.+.++|.+|||.+.+...||.|.|++.+.....+++.|+|.|+..+ ++++.|
T Consensus 79 ~~t~~dFW~mv~~~~~~~IVmL~~~~e~~~~~~~~Ywp~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v 158 (258)
T smart00194 79 PSTVEDFWRMVWEEKVTTIVMLTELEEKGREKCAQYWPEEEEPLTYGDITVTLKSVEKVDDYTIRTLEVTNTGCSETRTV 158 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEEeccceeCCEeeccccCCCCCCcceECCEEEEEEEEEecCCEEEEEEEEEECCCCCcEEE
Confidence 9999999999999999999999999999999999999987767889999999999999999999999999876 689999
Q ss_pred EEeeecCCCCCCCCCChHHHHHHHHHHhhccccccccccceeEEEeecCCCCCCceE
Q psy8517 521 YHYHFQAWPDHGVPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSESPRKI 577 (614)
Q Consensus 521 ~~~~~~~WPd~gvP~~~~~~l~~i~~V~v~~~~e~~~~~~ilR~~~~s~~~~~~R~i 577 (614)
+||||.+|||+++|.++..+++|++.| +....... ..++. +++.|.|.+.++
T Consensus 159 ~~~~y~~W~d~~~P~~~~~~~~~i~~v--~~~~~~~~-~pivV--HC~~G~gRsg~f 210 (258)
T smart00194 159 THYHYTNWPDHGVPESPKSILDLVRAV--RKSQSTST-GPIVV--HCSAGVGRTGTF 210 (258)
T ss_pred EEEeeCCCCCCCCCCCHHHHHHHHHHH--HHhhccCC-CCEEE--EeCCCCCccchh
Confidence 999999999999999999999999999 55443322 23333 566676654443
No 11
>KOG0791|consensus
Probab=100.00 E-value=1.9e-38 Score=318.26 Aligned_cols=224 Identities=37% Similarity=0.675 Sum_probs=191.9
Q ss_pred cccccccchHHHHHhhccCCCCcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCc
Q psy8517 339 RITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAE 418 (614)
Q Consensus 339 ~~~~~~l~~~~~~l~~~~~~~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~d 418 (614)
.+..++++.+....... ++-+|.+||+.+.-.... .+.-.|..+.|.+||||.|++|||++||+|.+.+ +.+++|
T Consensus 77 ~i~len~e~~~~~~~~d--sn~~f~eey~~lk~~g~~--~~~~aA~l~~n~~knr~~nilpYd~Srvkl~~~~-e~~~~D 151 (374)
T KOG0791|consen 77 PVSLENFELHVKKMSAD--SNYKFSEEYNELKLVGLD--QSKLAALLPLNRPKNRYTNILPYDNSRVKLSPVN-EEEGSD 151 (374)
T ss_pred ceeeccchhhhhhcccc--cchhhHHHHhhhhhhccc--chhhhhhcCCCCCcCCcCCCCCcccccceecccc-ccchhh
Confidence 56677777777765543 688999999999765432 2445688999999999999999999999999775 457799
Q ss_pred eeeeeeeccCCCCceEEEecCCCCCchhhhhcceeccccceEEeeccccccCcccccccCCCCCCCeeeecEEEEeEEEe
Q psy8517 419 YINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYES 498 (614)
Q Consensus 419 YINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~ 498 (614)
|||||||.|+...+.|||||||+++|.++||+||||+++.+|||||+..|.++.||..|||.+..+..||+++|..+.+.
T Consensus 152 YinA~~~Pg~~s~~~fIAtQGPlp~t~~~fW~mvwq~~~~~IVmlt~~~e~~R~kc~~ywP~~~~~~~~gdi~V~~v~e~ 231 (374)
T KOG0791|consen 152 YINASYIPGYNSPREFIATQGPLPETRDDFWKMVWQQKSHIIVMLTKCNEKGRVKCDEYWPDEEVPVAYGDITVTMVSEE 231 (374)
T ss_pred hhhhhhcCCCCCcceEEEeeCCCCCChhHHHHHHHHhhcceEEEEeecccccchhhhhhcccccccceeccEEEEEechh
Confidence 99999999999999999999999999999999999999999999999999999999999999877788999999999999
Q ss_pred eecCEEEEEEEEEeCCCCceEEEEeeecCCCCCCCCCChHHHHHHHHHHhhccccccccccceeEEEeecCCCCC
Q psy8517 499 VTTDYILREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSES 573 (614)
Q Consensus 499 ~~~~~~~r~l~v~~~~~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V~v~~~~e~~~~~~ilR~~~~s~~~~~ 573 (614)
...++.+|.|.+. ....+|.++||||+.|||+|+|..++.++.|++.+ ...-.... ..++. +++++.|.
T Consensus 232 ~~~~w~ir~~~l~-~~~~sr~ir~f~y~~wPd~gvp~~~~sl~~f~~~~--r~~~~~~~-~p~iV--hCSAGVgR 300 (374)
T KOG0791|consen 232 SLDEWTIREFRLN-YAGESRKIRHFHYTAWPDFGVPSSTESLLQFVRMV--RQSLDTSK-GPTIV--HCSAGVGR 300 (374)
T ss_pred hcCCceEEEEeee-cccccceeEEEEEeeccccCCCCCchhHHHHHHHH--HhhcccCC-CceeE--Eeeccccc
Confidence 9999999999998 33689999999999999999999999999999998 54333332 23332 56776654
No 12
>KOG0790|consensus
Probab=100.00 E-value=2.8e-39 Score=327.03 Aligned_cols=361 Identities=35% Similarity=0.516 Sum_probs=235.8
Q ss_pred hhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCeeecCCCccccCHHHHHHhcc
Q psy8517 238 ELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYK 317 (614)
Q Consensus 238 e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~eLV~~y~ 317 (614)
...|||..+.+.+||+||+..+.+|+||.|+|+++||+|+||++.+++++|++|...++.|++.|+++|.++.|||+||+
T Consensus 3 s~~wfh~~~~g~~ae~Ll~~~g~dgsfl~r~s~sNp~~fsl~~r~~~~v~hikiq~~~~~~~l~~gekfat~~ELvqyym 82 (600)
T KOG0790|consen 3 SRRWFHPDLSGVEAETLLKERGVDGSFLARPSESNPGDFSLSVRRGDKVTHIKIQNSGDFYDLYGGEKFATLAELVQYYM 82 (600)
T ss_pred chhhcCCCccchhHHHHHHHhccccchhhccccCCCcceeEEEEeCCceEEEEEeecCccccccCCccccchHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCC--eecccCeEEEecCCccccccccc-----ccchHHHHHhhccCCCCcchHHHHHHhhhc-----------------
Q psy8517 318 RNP--MVETSGTVVHLKQPFNATRITVS-----NIHDRVTELQKENSSKAGFWEEFESLQQQE----------------- 373 (614)
Q Consensus 318 ~~~--l~~~~g~~~~L~~P~~~t~~~~~-----~l~~~~~~l~~~~~~~~g~~~Ef~~l~~~~----------------- 373 (614)
.++ |.+++|..+.|++|++|.+++.+ |+....++......++.|.+.-.+++..+.
T Consensus 83 e~~~~lkekng~~ielK~pl~cAdptserWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~ 162 (600)
T KOG0790|consen 83 EHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDS 162 (600)
T ss_pred hhhHHHHhcCCCEEEecCCCccCCchhhhhhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCC
Confidence 775 89999999999999999776654 777777765554557777776666655432
Q ss_pred ---ccccccccccccccccCCCCCCCCC---------CCC---CcceeecCCCCCCCCCceeeeeeeccCCCCceEEEec
Q psy8517 374 ---SRHLFTRREGQKLDNRNKNRYKNIL---------PFD---HTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQ 438 (614)
Q Consensus 374 ---~~~~~~~~~~~~~~n~~kNR~~~i~---------p~d---~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ 438 (614)
++|++.++...+...+...||+.+. |-- .+-|.|.. .-....|||.-|...- ....--|
T Consensus 163 ~~kVtHvmI~~q~~kydVGgge~F~sltdLidhykknpmvEt~gtvv~Lrq----P~naTrI~Aa~i~~Rv--e~l~k~~ 236 (600)
T KOG0790|consen 163 KLKVTHVMIRCQEGKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVVYLRQ----PLNATRINAADIENRV--EELNKKQ 236 (600)
T ss_pred ccceEEEEEEecccccccCCccccchHHHHHHHhccCchhhhcceeEEeec----cccccchhhhhHHHHH--HHHhccc
Confidence 2333344444555556666665431 110 11122220 1112344444333220 0000012
Q ss_pred CCCCCchhhhhc---ceeccccceEE---eeccccccCcccccccCCCCC-------------CCeeeecEEE------E
Q psy8517 439 GCLPSTMNDFWS---MVWQENVRVIV---MTTKEMERGKNKCAKYWPDDH-------------QSKTYGAVCV------N 493 (614)
Q Consensus 439 ~Pl~~T~~dFW~---mvwe~~~~~IV---mLt~~~e~~~~kc~~YwP~~~-------------~~~~~g~~~V------~ 493 (614)
-|-......||+ -..++.++-.. --.+.+..+++...+..|.+. ++..++...| .
T Consensus 237 e~~d~~k~GfwEEFesLqq~~~~~~~sr~EG~r~eN~~KNRYkNIlPfDHtRViL~d~~~n~pgsdYINAnyi~~~~q~~ 316 (600)
T KOG0790|consen 237 ESEDTAKAGFWEEFESLQQQEVKNLHSRLEGQRPENKGKNRYKNILPFDHTRVILQDRDPNIPGSDYINANYIMIEFQRL 316 (600)
T ss_pred cchhhhhcchhHHHHHhhhhhhHhhhhhhccccchhhccccccccCcccceeeEeecCCCCCccchhcccchhhhhhhhc
Confidence 222222334663 22343444321 011222334444444445321 1111222111 1
Q ss_pred eEEEeeecCEEEEEEEEE---------eCCCCceEEEEe----------eecCCCCCCCCCChHHHHHHHHHHhhccccc
Q psy8517 494 NMYESVTTDYILREFLVS---------KGSESPRKIYHY----------HFQAWPDHGVPSDPGCVLNFLYEVCVNNMYE 554 (614)
Q Consensus 494 ~~~~~~~~~~~~r~l~v~---------~~~~~~r~v~~~----------~~~~WPd~gvP~~~~~~l~~i~~V~v~~~~e 554 (614)
+......+.||...-.+. ..++++|.|.+- +..+|||.+.++..+.+ ++++..+
T Consensus 317 ~~~~~~kKsyIAtQGCL~nTVnDFW~MvwQENsrVIVMtTkE~ERgK~KC~~YWPee~~~e~~G~~-------~v~~v~E 389 (600)
T KOG0790|consen 317 CNNSKPKKSYIATQGCLQNTVNDFWRMVWQENSRVIVMTTKEVERGKSKCVKYWPEEGALEEYGVM-------RVRNVKE 389 (600)
T ss_pred cCccccccceeehhhHHHHHHHHHHHHHHhccceEEEEehhhhhcccccccccCCcccchhhcCce-------EEEeccc
Confidence 111122233443221111 122556666543 35679999998877755 5588899
Q ss_pred cccccceeEEEeecC--CCCCCceEEEEeecccCCCCCCCChhHHHHHHHHHhhccccC
Q psy8517 555 SVTTDYILREFLVSK--GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQDIH 611 (614)
Q Consensus 555 ~~~~~~ilR~~~~s~--~~~~~R~i~h~~~~~WPDhGvP~~p~~~l~f~~~v~~~~~~~ 611 (614)
..+.+|+||+|.++. .....|.|+||||..|||||||.||++||+||++|+++|++-
T Consensus 390 ~~t~dY~LR~l~vs~~~~g~~~R~I~~yh~~tWPDHGvP~dPg~vLnFLe~V~~rq~~l 448 (600)
T KOG0790|consen 390 SDTHDYTLRELKVSKLGNGNLEREIWHYHYLTWPDHGVPSDPGGVLNFLEEVNHRQESL 448 (600)
T ss_pred cccccceehheeeccccCCcchhhhhhhheeecccCCCcCCccHHHHHHHHhhhhhccc
Confidence 999999999999984 223579999999999999999999999999999999999853
No 13
>KOG0793|consensus
Probab=100.00 E-value=3e-38 Score=333.17 Aligned_cols=208 Identities=37% Similarity=0.642 Sum_probs=179.8
Q ss_pred CCCcchHHHHHHhhhcccccccccccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCC-CCceEEE
Q psy8517 358 SKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSED-GGKSYIA 436 (614)
Q Consensus 358 ~~~g~~~Ef~~l~~~~~~~~~~~~~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~-~~~~yIa 436 (614)
.+..+..||+.|....... .++..+..+.|..|||...++||||+||.|... .+...+||||||+|...+ ....|||
T Consensus 730 nk~rlekeWealc~YqaEp-n~r~~aq~e~~a~kNR~~a~LpyDhsrV~l~~~-~s~s~~dYiNAS~I~DhDPR~paYIA 807 (1004)
T KOG0793|consen 730 NKNRLEKEWEALCAYQAEP-NSRFVAQREENAPKNRSLAVLPYDHSRVLLKAE-NSHSHSDYINASPIMDHDPRNPAYIA 807 (1004)
T ss_pred CchHHHHHHHHHHHhhcCc-chhhhhcccccccccCCCCccccccceeeeccc-cCccccccccccccccCCCCccceee
Confidence 6778999999997654321 235567789999999999999999999999854 456789999999998774 4578999
Q ss_pred ecCCCCCchhhhhcceeccccceEEeeccccccCcccccccCCCCCCCeeeecEEEEeEEEe-eecCEEEEEEEEEeCC-
Q psy8517 437 TQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYES-VTTDYILREFLVSKGS- 514 (614)
Q Consensus 437 tQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~-~~~~~~~r~l~v~~~~- 514 (614)
||||+++|+.|||+||||++|.+|||||++.|.|...|++|||+++ +..|+.|.|.+++|. ...||.+|.|.+++.+
T Consensus 808 tQgPl~stiA~FWQmvWe~G~~vIV~Lt~l~Engv~qc~rYWPdeG-selyhiyEV~LVSEHIWceDfLVRSFYLKNlqt 886 (1004)
T KOG0793|consen 808 TQGPLPSTIADFWQMVWESGCVVIVMLTPLAENGVRQCYRYWPDEG-SELYHIYEVNLVSEHIWCEDFLVRSFYLKNLQT 886 (1004)
T ss_pred ccCCCchHHHHHHHHHHHcCcEEEEEecChhhcchhhhhhcCCCCC-cceeeeEEeeeehhhhhhhhHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999976 678999999999986 5789999999999887
Q ss_pred CCceEEEEeeecCCCCCCCCCChHHHHHHHHHHhhccccccccccceeEEEeecCCCCC
Q psy8517 515 ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSES 573 (614)
Q Consensus 515 ~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V~v~~~~e~~~~~~ilR~~~~s~~~~~ 573 (614)
.++|+|+||||.+||+.|+|.+..++|+|-+.| |+..+.-+-..++ +++.+.|.
T Consensus 887 seTRTvTQFHfLSWp~egvPasarslLdFRRKV--NK~YRGRScpIiV---H~sdGaGR 940 (1004)
T KOG0793|consen 887 SETRTVTQFHFLSWPDEGVPASARSLLDFRRKV--NKCYRGRSCPIIV---HCSDGAGR 940 (1004)
T ss_pred ccceeeeeeeeecccccCCccchHHHHHHHHHh--hhhccCCCCceEE---EccCCCCc
Confidence 899999999999999999999999999999999 8877665433333 46666653
No 14
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=100.00 E-value=2.5e-35 Score=294.75 Aligned_cols=178 Identities=45% Similarity=0.833 Sum_probs=155.0
Q ss_pred CCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEecCCCCCchhhhhcceeccccceEEeecccccc
Q psy8517 390 NKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMER 469 (614)
Q Consensus 390 ~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~e~ 469 (614)
.||||+|++|||++||+|.... ...+||||||||+|+..+++||+||+|+++|++|||+|||+++|.+||||+...|.
T Consensus 1 ~knR~~~~~~~d~~rV~l~~~~--~~~~~yinA~~v~~~~~~~~fI~tQ~P~~~t~~~FW~mv~~~~~~~IV~l~~~~e~ 78 (231)
T cd00047 1 KKNRYKDILPYDHTRVKLKPDD--DEGSDYINASYIDGYNPPKAYIATQGPLPNTVEDFWRMVWEQKVPVIVMLTELVEK 78 (231)
T ss_pred CCCCCCCCCCCCCCEEEccCCC--CCCCCcEEeeeEecCCCCcceEEcCCCChhhHHHHHHHHHhcCCCEEEEccccccC
Confidence 4899999999999999998532 24588999999999998899999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCeeeecEEEEeEEEeeecCEEEEEEEEEeCC-CCceEEEEeeecCCCCCCCCCChHHHHHHHHHHh
Q psy8517 470 GKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGS-ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVC 548 (614)
Q Consensus 470 ~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~~-~~~r~v~~~~~~~WPd~gvP~~~~~~l~~i~~V~ 548 (614)
+.++|.+|||.+.+...||.|+|++.+.+...+++.++|.|+..+ +.++.|.||||.+|||.++|+++..+++|++.|
T Consensus 79 ~~~~~~~Ywp~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~i~~~~~~~~~~V~~~~~~~W~d~~~p~~~~~~~~~~~~v- 157 (231)
T cd00047 79 GREKCAQYWPEEEGSLTYGDITVTLVSEEKLDDYTVRTLKLSNTGTGETRTVTHFQYTGWPDHGVPESPDSLLDLLRKV- 157 (231)
T ss_pred CCccCccCCCCCCCCeEecCEEEEEEEEEEcCCEEEEEEEEEECCCCCceEEEEEeECCCCCCCccCChHHHHHHHHHH-
Confidence 999999999987667789999999999998899999999999987 899999999999999999999999999999998
Q ss_pred hccccccccccceeEEEeecCCCCC
Q psy8517 549 VNNMYESVTTDYILREFLVSKGSES 573 (614)
Q Consensus 549 v~~~~e~~~~~~ilR~~~~s~~~~~ 573 (614)
+..........++- ++..|.+.
T Consensus 158 -~~~~~~~~~~pivV--HC~~G~gR 179 (231)
T cd00047 158 -RKSQQQPGSGPIVV--HCSAGVGR 179 (231)
T ss_pred -HHHhccCCCCCeEE--ECCCCCCc
Confidence 54432122233333 45555543
No 15
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=267.64 Aligned_cols=188 Identities=33% Similarity=0.559 Sum_probs=151.5
Q ss_pred cccccccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEecCCCCCchhhhhcceecccc--ceE
Q psy8517 383 GQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENV--RVI 460 (614)
Q Consensus 383 ~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~--~~I 460 (614)
...+.|-.||||.||+||++|||.|... .+.+||||||||+...+ .|||||||+++|++|||.|||+... .+|
T Consensus 48 sls~~~~~rNRYsnIvPYe~tRV~Lk~~---k~~~DYINAS~ik~~~~--~yIAtQgP~~~t~ddFW~mvw~n~~~~gvI 122 (302)
T COG5599 48 SLSSTNYARNRYSNIVPYEHTRVHLKYG---KSINDYINASYIKTPRG--KYIATQGPKPETIDDFWKMVWHNVPNNGVI 122 (302)
T ss_pred ccCccccccccccccccccCceeeccCC---CchhhcccceeeecCCC--ceEEecCCCCchHHHHHHHHHhcCCCceEE
Confidence 4567788899999999999999999865 24689999999998774 4999999999999999999999988 999
Q ss_pred EeeccccccCcccccccCCCC-CCCeeeecEEEEeEEEeee--cCEEEEEEEEEeCCCCceEEEEeeecCCCCCCCCCCh
Q psy8517 461 VMTTKEMERGKNKCAKYWPDD-HQSKTYGAVCVNNMYESVT--TDYILREFLVSKGSESPRKIYHYHFQAWPDHGVPSDP 537 (614)
Q Consensus 461 VmLt~~~e~~~~kc~~YwP~~-~~~~~~g~~~V~~~~~~~~--~~~~~r~l~v~~~~~~~r~v~~~~~~~WPd~gvP~~~ 537 (614)
|||+++.|.+++||.+|||.. ++...+|...+..++.+.. .-+..+.++++...+..+.|.||+|.+|+|.+.| +.
T Consensus 123 VmLt~l~E~~rekc~qYWp~~~~~~~~~G~~v~~~~~~e~~~d~~~~~~~f~L~~~~~~~k~Ihhf~y~nW~D~~~p-~i 201 (302)
T COG5599 123 VMLTSLPEYNREKCDQYWPLGYDDTLIIGLRVIKQKKYELFNDNIVNVHNFELTSINGPPKKIHHFQYINWVDFNVP-DI 201 (302)
T ss_pred EEecChHHHhHHHHhhhCCCCcCcceeeeeEEEEEecccccccceeeeeecccccCCCCccEEEEEEecCccccCCc-CH
Confidence 999999999999999999943 3455688766666655433 3356888888877789999999999999999999 66
Q ss_pred HHHHHHHHHHhhccccccccccceeEEEeecCCCCCCceEEEEee
Q psy8517 538 GCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHF 582 (614)
Q Consensus 538 ~~~l~~i~~V~v~~~~e~~~~~~ilR~~~~s~~~~~~R~i~h~~~ 582 (614)
..+.++++.+ +... .....++. +|++|.|++.++..+.+
T Consensus 202 ~sl~~~~~sl--~~sp--~~t~piiV--HCSAGvGRTGTFIalD~ 240 (302)
T COG5599 202 RSLTEVIHSL--NDSP--VRTGPIIV--HCSAGVGRTGTFIALDI 240 (302)
T ss_pred HHHHHHHHHh--hcCc--CCCCCEEE--EeccCCCCcceeeeHHH
Confidence 6676666666 4321 12334444 78999988887766654
No 16
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=99.98 E-value=5.2e-32 Score=270.80 Aligned_cols=161 Identities=39% Similarity=0.794 Sum_probs=141.0
Q ss_pred ccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEecCCCCCchhhhhcceeccccceEEeecccc
Q psy8517 388 NRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEM 467 (614)
Q Consensus 388 n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~~~ 467 (614)
|..|||+.+++|+|++||+|.+. .+..||||||||+++...++||+||+|+++|++|||+|||+++|.+||||++..
T Consensus 1 n~~knR~~~~~~~d~~rv~l~~~---~~~~~yi~A~~v~~~~~~~~~I~~q~P~~~t~~~FW~mv~~~~~~~Iv~L~~~~ 77 (235)
T PF00102_consen 1 NREKNRSPDILPYDDSRVKLNPS---PGDSDYINASYVDGYKNGKKFIVTQAPMPDTIEDFWQMVWEQKVQIIVMLCSFD 77 (235)
T ss_dssp GGGGSSSTTS-BBTTTEEETTTT---TTSTTEESEEEEEESSSTEEEEEEES-SGGGHHHHHHHHHHTTBSEEEEESBSE
T ss_pred CCccCCCCCCCcCcceEEEecCC---CCccchhhhhhhccccchhhheeecccccccccceehheeeccccceecccccc
Confidence 67899999999999999999532 233579999999999889999999999999999999999999999999999999
Q ss_pred ccCcccccccCCC-CCCCeeeecEEEEeE-EEe-eecCEEEEEEEEEeCCCC--ceEEEEeeecCCCCCCCCCChHHHHH
Q psy8517 468 ERGKNKCAKYWPD-DHQSKTYGAVCVNNM-YES-VTTDYILREFLVSKGSES--PRKIYHYHFQAWPDHGVPSDPGCVLN 542 (614)
Q Consensus 468 e~~~~kc~~YwP~-~~~~~~~g~~~V~~~-~~~-~~~~~~~r~l~v~~~~~~--~r~v~~~~~~~WPd~gvP~~~~~~l~ 542 (614)
|.+.++|.+|||. .++...+|.++|++. +.. ....++.|.|.++..... ++.+.||||..||++++|.+...+++
T Consensus 78 e~~~~~~~~y~P~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~v~~~~~~~W~~~~~P~~~~~~~~ 157 (235)
T PF00102_consen 78 ESGDEKCDQYWPLKEGESLKFGDYTVKCKEKIEENSKHYTVRKLEVTNGKSKKKSRTVTHFHYTNWPDDGVPPSPESFLD 157 (235)
T ss_dssp ETTEESS--TSTSSSSSEEEETTEEEEEEEEEEEEESSEEEEEEEEEETTTTEEEEEEEEEEEESSSSSSSGSSSHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccceEEeeccccccccccccccccceeeeeccccccccccchhhh
Confidence 9999999999994 456778999999999 655 788999999999998744 69999999999999999999999999
Q ss_pred HHHHHhhcccc
Q psy8517 543 FLYEVCVNNMY 553 (614)
Q Consensus 543 ~i~~V~v~~~~ 553 (614)
|++.+ +...
T Consensus 158 ~~~~v--~~~~ 166 (235)
T PF00102_consen 158 FIRKV--NKSK 166 (235)
T ss_dssp HHHHH--HHHH
T ss_pred hhhhc--cccc
Confidence 99999 5544
No 17
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=99.96 E-value=4.9e-30 Score=269.50 Aligned_cols=175 Identities=19% Similarity=0.224 Sum_probs=139.3
Q ss_pred CCCCC--CCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEecCCCC--CchhhhhcceeccccceEEeecc
Q psy8517 390 NKNRY--KNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLP--STMNDFWSMVWQENVRVIVMTTK 465 (614)
Q Consensus 390 ~kNR~--~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ~Pl~--~T~~dFW~mvwe~~~~~IVmLt~ 465 (614)
..-|| ++|+|+|+|||+|.+ ++|||||||+ +..++.+|++|.|+. +|++|||+||||++|.+|||||+
T Consensus 298 ~~~~~~~~~I~~~~~TrV~ls~-------g~yI~ANyI~-~~~k~~aIa~QYP~nt~eTieDFWrMVWEn~~~VIVMLT~ 369 (535)
T PRK15375 298 GLARFAVSSIPINQQTQVKLSD-------GMPVPVNTLT-FDGKPVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTS 369 (535)
T ss_pred hhhHHHhcccCccccceEEcCC-------CCccccceee-ecCccceEeccCCCCchhhHHHHHHHHHHcCCCEEEEeec
Confidence 34455 589999999999963 6799999999 888889999999976 89999999999999999999999
Q ss_pred ccccCcccccccCCCCCCCeeeecEEEEeEEEeee-cCEEEEEEEEEeCC-CCceEEEEeeecCCCCCCCCCChHHHHHH
Q psy8517 466 EMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVT-TDYILREFLVSKGS-ESPRKIYHYHFQAWPDHGVPSDPGCVLNF 543 (614)
Q Consensus 466 ~~e~~~~kc~~YwP~~~~~~~~g~~~V~~~~~~~~-~~~~~r~l~v~~~~-~~~r~v~~~~~~~WPd~gvP~~~~~~l~~ 543 (614)
..|.++.+|.+||+ ++..||++.|++.+++.. .++++|.+.+.... +..+.|.||||++|||+|+|+++..+++|
T Consensus 370 l~E~g~~KC~pYW~---~s~tYGdItVts~seesls~g~iIR~f~L~Ik~~E~R~tV~QFHyTnWPDHGVPpST~~LleL 446 (535)
T PRK15375 370 EDQMQAKQLPPYFR---GSYTFGEVHTNSQKVSSASQGEAIDQYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYL 446 (535)
T ss_pred cccCcccccCccCC---CcceeccEEEEEEEEEeccCCceEEEEEEEEecCCceeEEEEEEeCCCCCCCCCCChHHHHHH
Confidence 99999999999996 357799999998887664 46888887665443 44458999999999999999988889999
Q ss_pred HHHHhhcccccccc-----ccceeEEEeecCCCCCCceE
Q psy8517 544 LYEVCVNNMYESVT-----TDYILREFLVSKGSESPRKI 577 (614)
Q Consensus 544 i~~V~v~~~~e~~~-----~~~ilR~~~~s~~~~~~R~i 577 (614)
++.| +...+... ++...-.++|++|.|++.++
T Consensus 447 vr~V--r~~~q~~~~~~~~~nk~~PVVHCSAGVGRTGTF 483 (535)
T PRK15375 447 ADRV--KNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTM 483 (535)
T ss_pred HHHH--HHhhhcccccccccCCCCceEEcCCCCchHHHH
Confidence 9998 55422110 01000135788888755543
No 18
>KOG0789|consensus
Probab=99.94 E-value=1.1e-26 Score=252.33 Aligned_cols=188 Identities=29% Similarity=0.476 Sum_probs=137.7
Q ss_pred ccccccccCCCCCCCCCCCCCcceeecCCCCCCCCCceeeeeeeccCCCCceEEEecCCCCCchhhhhcceeccccceEE
Q psy8517 382 EGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIV 461 (614)
Q Consensus 382 ~~~~~~n~~kNR~~~i~p~d~tRV~L~~~~~~~~~~dYINAs~I~g~~~~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IV 461 (614)
......|..||||.||.|+|++||+|.... ..||||||||+++...+.||+||||+++|.+|||+|||++++..||
T Consensus 121 ~~~~~~~~~kNr~~dv~~~d~~rV~l~~~~----~~dyI~A~~v~~~~~~~~~I~tQ~Pl~~t~~dFW~mv~~~k~~~Iv 196 (415)
T KOG0789|consen 121 CDAFLKNMDKNRYSDVQCLDHTRVKLKPPQ----DKDYIHASKIYFPKGPRTAILTQAPLSKTTEDFWRMVFEEKVESVV 196 (415)
T ss_pred hhhhhccccccccCCcCcccCCeeecCCCC----CcccchhhccCCcCCCcCceecCCCCcccHHHHHHHHHHcCCCEEE
Confidence 344567788999999999999999997432 5789999999998633899999999999989999999999999999
Q ss_pred eeccccccCcccccccCCCCCC-CeeeecEEEEeEE---Eeee---cCEEEEEEEEEeCC--CCceEEEEeeecCCCCCC
Q psy8517 462 MTTKEMERGKNKCAKYWPDDHQ-SKTYGAVCVNNMY---ESVT---TDYILREFLVSKGS--ESPRKIYHYHFQAWPDHG 532 (614)
Q Consensus 462 mLt~~~e~~~~kc~~YwP~~~~-~~~~g~~~V~~~~---~~~~---~~~~~r~l~v~~~~--~~~r~v~~~~~~~WPd~g 532 (614)
|||+..|.+..+|.+|||...+ ...|+.+..+... .... ..+....+.+.... ..++.|.|+||.+|||+|
T Consensus 197 ml~~~~E~~~~kc~~Y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~WPd~~ 276 (415)
T KOG0789|consen 197 LLCSDEELGAAECASYFPSKRGVKLTFLEFGKKFVENRKVEMKQQDQTSTVGLLLLVLPEGLEISSSVVHYHYINWPDHG 276 (415)
T ss_pred EecchhhccHHHHhhcCcccCCCeeeecccceeEEEeeeeecccccccceeeEEEeecCCCccccceEEEEeeCCCcccc
Confidence 9999999999999999998763 3456666433332 2221 22333322222222 345799999999999999
Q ss_pred CCCChHHHHHHHHHHhhccccccccccceeEEEeecCCCCCCceEE
Q psy8517 533 VPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSESPRKIY 578 (614)
Q Consensus 533 vP~~~~~~l~~i~~V~v~~~~e~~~~~~ilR~~~~s~~~~~~R~i~ 578 (614)
+|.+...++.++... +...+. ...+.++ +++.|.|...++.
T Consensus 277 ~p~~~~~~l~~~~~~-~~~~~~-~~~P~vV---hcsaG~gRtgt~v 317 (415)
T KOG0789|consen 277 APDSVKSILPLLRQS-VLELRP-KQEPIEV---HCSAGAGRAGTLV 317 (415)
T ss_pred CCcchHHHHHHHHhh-hhhhcC-CCCCeEE---ECCCCCCccchHH
Confidence 999999999988640 011111 1222222 5777777666544
No 19
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=99.93 E-value=2.3e-28 Score=251.14 Aligned_cols=135 Identities=20% Similarity=0.267 Sum_probs=107.5
Q ss_pred ccccchhHHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHh------hhcCCCEEEec
Q psy8517 40 TKYFMPYTYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQ------IKKHGPVVVHC 113 (614)
Q Consensus 40 ~~~~~~~~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~------~~~~~pv~VHC 113 (614)
.+....++|++|.|.|++ .+++.|.|.|||||+||+++.|........+...++..... ....+||+|||
T Consensus 153 ~~~~~~~~~~~~~l~l~~----~~~~~r~V~Hfqyt~WPd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~PIVVHC 228 (298)
T PHA02740 153 LEIIIKPHFNLTLLSLTD----KFGQAQKISHFQYTAWPADGFSHDPDAFIDFFCNIDDLCADLEKHKADGKIAPIIIDC 228 (298)
T ss_pred EEEEecCCEEEEEEEEEc----CCCCcEEEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEC
Confidence 334456789999999988 67889999999999999887765443322222222222111 12357999999
Q ss_pred cCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHH
Q psy8517 114 SAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAV 193 (614)
Q Consensus 114 s~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v 193 (614)
|||+||||+|||+|+|++++.+++ .+|++++|.++|+||++||||.+||.|||++|
T Consensus 229 SaGvGRTGtFcaiDi~l~~~~~~~------------------------~vdi~~~V~~lR~qR~~~Vqt~~QY~F~y~~l 284 (298)
T PHA02740 229 IDGISSSAVFCVFDICATEFDKTG------------------------MLSIANALKKVRQKKYGCMNCLDDYVFCYHLI 284 (298)
T ss_pred CCCCchhHHHHHHHHHHHHHHhcC------------------------cccHHHHHHHHHhhCccccCCHHHHHHHHHHH
Confidence 999999999999999999999877 68999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q psy8517 194 QHYIQTLSQ 202 (614)
Q Consensus 194 ~~~i~~~~~ 202 (614)
.+|+.....
T Consensus 285 ~~yl~~~~~ 293 (298)
T PHA02740 285 AAYLKEKFD 293 (298)
T ss_pred HHHHHHhhc
Confidence 999976543
No 20
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=99.90 E-value=1.6e-25 Score=231.59 Aligned_cols=125 Identities=22% Similarity=0.297 Sum_probs=98.8
Q ss_pred hHHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHh------------hhcCCCEEEec
Q psy8517 46 YTYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQ------------IKKHGPVVVHC 113 (614)
Q Consensus 46 ~~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~------------~~~~~pv~VHC 113 (614)
..|+++.|.|++ ...++.|.|.||||++||+++.|....... ..+..+... ....+||+|||
T Consensus 163 ~~~~~~~l~l~~---~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l---~~i~~v~~~~~~~~~~~~~~~~~~~~PIvVHC 236 (303)
T PHA02742 163 RNYAVTNLCLTD---TNTGASLDIKHFAYEDWPHGGLPRDPNKFL---DFVLAVREADLKADVDIKGENIVKEPPILVHC 236 (303)
T ss_pred CCEEEEEEEEEE---CCCCceEEEEEEEECCCCCCCcCCCHHHHH---HHHHHHHHHhhhccccccccccCCCCCeEEEC
Confidence 467777788877 356889999999999999876554322211 111111110 01247999999
Q ss_pred cCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHH
Q psy8517 114 SAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAV 193 (614)
Q Consensus 114 s~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v 193 (614)
|||+||||+|||+|++++++.+++ .++++++|++||+||++||||.+||.|||++|
T Consensus 237 saGvGRTGtF~aid~~i~~~~~~~------------------------~v~v~~~V~~lR~qR~~~Vqt~~QY~F~y~~l 292 (303)
T PHA02742 237 SAGLDRAGAFCAIDICISKYNERA------------------------IIPLLSIVRDLRKQRHNCLSLPQQYIFCYFIV 292 (303)
T ss_pred CCCCchhHHHHHHHHHHHHHHhcC------------------------CCCHHHHHHHHHhhcccccCCHHHHHHHHHHH
Confidence 999999999999999999998776 58899999999999999999999999999999
Q ss_pred HHHHHHH
Q psy8517 194 QHYIQTL 200 (614)
Q Consensus 194 ~~~i~~~ 200 (614)
++|+...
T Consensus 293 ~~y~~~~ 299 (303)
T PHA02742 293 LIFAKLM 299 (303)
T ss_pred HHHHHHh
Confidence 9999764
No 21
>PHA02738 hypothetical protein; Provisional
Probab=99.89 E-value=3.8e-25 Score=230.15 Aligned_cols=131 Identities=23% Similarity=0.278 Sum_probs=100.7
Q ss_pred hhHHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhh-----------hcCCCEEEec
Q psy8517 45 PYTYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQI-----------KKHGPVVVHC 113 (614)
Q Consensus 45 ~~~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~-----------~~~~pv~VHC 113 (614)
...|+.+.|.|++ .+++.|.|.||||++||++..|........+...++...... ...+||+|||
T Consensus 159 ~~~~~~~~l~l~~----~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~~~~~~PIVVHC 234 (320)
T PHA02738 159 HPHYVKSTLLLTD----GTSATQTVTHFNFTAWPDHDVPKNTSEFLNFVLEVRQCQKELAQESLQIGHNRLQPPPIVVHC 234 (320)
T ss_pred cCCeEEEEEEEEe----CCCCcEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccCccccCCCCeEEEc
Confidence 4578888888887 678999999999999997655433211100101111100000 1147999999
Q ss_pred cCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHH
Q psy8517 114 SAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAV 193 (614)
Q Consensus 114 s~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v 193 (614)
|+|+||||+|||+|++++++..++ .++++++|.+||+||++||||.+||.|||++|
T Consensus 235 s~GiGRtGtFcaidi~i~~~~~~~------------------------~vdv~~~V~~lR~qR~~~vqt~~QY~F~y~~l 290 (320)
T PHA02738 235 NAGLGRTPCYCVVDISISRFDACA------------------------TVSIPSIVSSIRNQRYYSLFIPFQYFFCYRAV 290 (320)
T ss_pred CCCCChhhhhhHHHHHHHHHHhcC------------------------CcCHHHHHHHHHhhhhhccCCHHHHHHHHHHH
Confidence 999999999999999999999876 68999999999999999999999999999999
Q ss_pred HHHHHHHhhh
Q psy8517 194 QHYIQTLSQR 203 (614)
Q Consensus 194 ~~~i~~~~~~ 203 (614)
.+|+......
T Consensus 291 ~~y~~~~~~~ 300 (320)
T PHA02738 291 KRYVNLTVNK 300 (320)
T ss_pred HHHHHhcCch
Confidence 9999765443
No 22
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=99.89 E-value=4.7e-25 Score=228.89 Aligned_cols=133 Identities=21% Similarity=0.281 Sum_probs=102.1
Q ss_pred cccchhHHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhhh--------cCCCEEEe
Q psy8517 41 KYFMPYTYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIK--------KHGPVVVH 112 (614)
Q Consensus 41 ~~~~~~~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~~--------~~~pv~VH 112 (614)
+......|+.++|.|++ ...++.|.|.||||++||+++.|........+...++....... ..+||+||
T Consensus 159 ~~~~~~~~~~~~l~l~~---~~~~~~r~V~h~~y~~Wpd~~~P~~~~~~l~fi~~v~~~~~~~~~~~~~~~~~~~PIvVH 235 (312)
T PHA02747 159 KTSVRAKYILTLIEITD---KILKDSRKISHFQCSEWFEDETPSDHPDFIKFIKIIDINRKKSGKLFNPKDALLCPIVVH 235 (312)
T ss_pred EEEecCCeEEEEEEEEE---CCCCCceEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHhhccccccccCCCCEEEE
Confidence 44455678888888887 35689999999999999987655432211111111111111111 13799999
Q ss_pred ccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHH---
Q psy8517 113 CSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFV--- 189 (614)
Q Consensus 113 Cs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~--- 189 (614)
||||+||||+|||+|++++++..++ .++++++|++||+||++||||.+||.||
T Consensus 236 CsaGvGRtGtfcaidi~i~~l~~~~------------------------~v~v~~~V~~lR~qR~~~Vqt~~QY~F~~~~ 291 (312)
T PHA02747 236 CSDGVGKTGIFCAVDICLNQLVKRK------------------------AICLAKTAEKIREQRHAGIMNFDDYLFIQPG 291 (312)
T ss_pred ecCCCcchhHHHHHHHHHHHHHhcC------------------------CCCHHHHHHHHHhccccccCCHHHHHHHHHH
Confidence 9999999999999999999998876 5889999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy8517 190 YLAVQHYIQTL 200 (614)
Q Consensus 190 y~~v~~~i~~~ 200 (614)
|+++.+|+...
T Consensus 292 Y~~l~~~~~~~ 302 (312)
T PHA02747 292 YEVLHYFLSKI 302 (312)
T ss_pred HHHHHHHHHHh
Confidence 99999888654
No 23
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=99.88 E-value=1.8e-24 Score=225.31 Aligned_cols=124 Identities=28% Similarity=0.356 Sum_probs=96.2
Q ss_pred hHHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHh-------h----hcCCCEEEecc
Q psy8517 46 YTYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQ-------I----KKHGPVVVHCS 114 (614)
Q Consensus 46 ~~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~-------~----~~~~pv~VHCs 114 (614)
..|+.+.|.+++ ...++.|.|.||||++||+++.|...... +..+..+... . ...+||+||||
T Consensus 182 ~~~~~~~l~l~~---~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~---l~~i~~v~~~~~~~~~~~~~~~~~~~PIvVHCs 255 (323)
T PHA02746 182 LSFTKTRLMITD---KISDTSREIHHFWFPDWPDNGIPTGMAEF---LELINKVNEEQAELIKQADNDPQTLGPIVVHCS 255 (323)
T ss_pred CCeEEEEEEEEE---CCCCCceEEEEEEECCCCCCCcCCCHHHH---HHHHHHHHHHHHHHhhhhccCCCCCCCEEEEcC
Confidence 356667777776 35678999999999999987554332111 1111222111 0 11379999999
Q ss_pred CCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHH
Q psy8517 115 AGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQ 194 (614)
Q Consensus 115 ~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~ 194 (614)
+|+||||+|||+|++++++..++ .++++++|.+||+||++||||.+||.|||++|.
T Consensus 256 aGvGRTGtfcaid~~l~~l~~~~------------------------~vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~ 311 (323)
T PHA02746 256 AGIGRAGTFCAIDNALEQLEKEK------------------------EVCLGEIVLKIRKQRHSSVFLPEQYAFCYKALK 311 (323)
T ss_pred CCCCcchhHHHHHHHHHHHHhcC------------------------CCCHHHHHHHHHhcccccCCCHHHHHHHHHHHH
Confidence 99999999999999999998876 588999999999999999999999999999999
Q ss_pred HHHHH
Q psy8517 195 HYIQT 199 (614)
Q Consensus 195 ~~i~~ 199 (614)
+||..
T Consensus 312 ~~l~~ 316 (323)
T PHA02746 312 YAIIE 316 (323)
T ss_pred HHHHH
Confidence 99854
No 24
>KOG0792|consensus
Probab=99.83 E-value=4e-22 Score=221.75 Aligned_cols=123 Identities=25% Similarity=0.357 Sum_probs=102.5
Q ss_pred HHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhhhc-CCCEEEeccCCcCCcceeee
Q psy8517 47 TYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKK-HGPVVVHCSAGIGRTGTFIV 125 (614)
Q Consensus 47 ~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~~~-~~pv~VHCs~GvgRsg~f~~ 125 (614)
.|+.+=+.|.| +.+++.|.|||+|||+||+++.+++.-... ..++.+...... .-||+||||||+||||+.|.
T Consensus 1009 ~y~tr~m~l~~---~~t~eeR~V~hLQYtaWPDHg~P~D~~~FL---~FleevrsvR~~t~pPilvHCSAGiGRTGVlIl 1082 (1144)
T KOG0792|consen 1009 CYVTREMTLKD---LQTREERTVWHLQYTAWPDHGVPDDPNDFL---DFLEEVRSVRRGTNPPILVHCSAGIGRTGVLIL 1082 (1144)
T ss_pred cEEEEeEEEee---ccCCceeeeeeeeecccccCCCCCChHHHH---HHHHHHHHHhccCCCCeEEEccCCCCcceehHH
Confidence 35666677888 589999999999999999987776655432 233444444444 45999999999999999999
Q ss_pred HHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHHHHHHH
Q psy8517 126 IDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQT 199 (614)
Q Consensus 126 id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~~~i~~ 199 (614)
+|.++..+.... .++++++|+.||.||.+||||+.||.|||++|+.++++
T Consensus 1083 ~e~~l~lle~Ne------------------------~vdi~divr~mR~QR~~mVQT~~QYkFVyevil~~l~~ 1132 (1144)
T KOG0792|consen 1083 METALCLLEHNE------------------------PVDILDIVRTMRDQRAMMVQTLSQYKFVYEVILRVLKR 1132 (1144)
T ss_pred HHHHHHHHhcCC------------------------CCCHHHHHHHHHHHHhhhccchHHhhHHHHHHHHHHHh
Confidence 999999888765 58899999999999999999999999999999999965
No 25
>KOG0791|consensus
Probab=99.81 E-value=3.1e-21 Score=194.43 Aligned_cols=120 Identities=30% Similarity=0.419 Sum_probs=96.5
Q ss_pred HhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHHHH
Q psy8517 54 GLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQI 133 (614)
Q Consensus 54 ~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~ 133 (614)
.++++++...++.|.+.|++|++||+++.+++......++-.+...+ ....+|++|||||||||||||+|+|.+++++
T Consensus 237 ~ir~~~l~~~~~sr~ir~f~y~~wPd~gvp~~~~sl~~f~~~~r~~~--~~~~~p~iVhCSAGVgRTGTFiald~LLqq~ 314 (374)
T KOG0791|consen 237 TIREFRLNYAGESRKIRHFHYTAWPDFGVPSSTESLLQFVRMVRQSL--DTSKGPTIVHCSAGVGRTGTFIALDRLLQQI 314 (374)
T ss_pred eEEEEeeecccccceeEEEEEeeccccCCCCCchhHHHHHHHHHhhc--ccCCCceeEEeecccccccchHhHHHHHHHh
Confidence 35667766789999999999999999877744333222211222111 1236799999999999999999999999999
Q ss_pred HhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHHHHHHH
Q psy8517 134 KKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQT 199 (614)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~~~i~~ 199 (614)
..+. .++++++|..+|.+|..||||++||+|+|+++.+-++.
T Consensus 315 ~~~~------------------------~vdi~~iv~~lR~~R~~mVqte~Qyvfl~~c~~~~l~~ 356 (374)
T KOG0791|consen 315 DSEE------------------------TVDIFGVVLELRSARMLMVQTEDQYVFLHQCVLESLQG 356 (374)
T ss_pred cccc------------------------cccHHHHHHHhhhccccccchHHHHHHHHHHHHHHHhC
Confidence 8775 68999999999999999999999999999999988753
No 26
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=99.79 E-value=8.8e-21 Score=182.66 Aligned_cols=125 Identities=26% Similarity=0.368 Sum_probs=90.2
Q ss_pred HHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhhh-cCCCEEEeccCCcCCcceeeeHHH
Q psy8517 50 LIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIK-KHGPVVVHCSAGIGRTGTFIVIDM 128 (614)
Q Consensus 50 ~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~~-~~~pv~VHCs~GvgRsg~f~~id~ 128 (614)
.+...|+. .+++.+.|.||+|.+|++.+++ ++.. .+.+-..+.... +.+|++|||||||||||||+|+|.
T Consensus 170 ~~~f~L~~----~~~~~k~Ihhf~y~nW~D~~~p--~i~s---l~~~~~sl~~sp~~t~piiVHCSAGvGRTGTFIalD~ 240 (302)
T COG5599 170 VHNFELTS----INGPPKKIHHFQYINWVDFNVP--DIRS---LTEVIHSLNDSPVRTGPIIVHCSAGVGRTGTFIALDI 240 (302)
T ss_pred eeeccccc----CCCCccEEEEEEecCccccCCc--CHHH---HHHHHHHhhcCcCCCCCEEEEeccCCCCcceeeeHHH
Confidence 45555665 6799999999999999976554 1110 011111111232 678999999999999999999999
Q ss_pred HHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHHHHHH
Q psy8517 129 ILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQ 198 (614)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~~~i~ 198 (614)
++++-....... + +.+ ...+.++++|..||.||+.|||+.+||+|||+++.++..
T Consensus 241 ll~~~~~~~~~t--~---~~~----------~t~D~if~iV~~LRsQRmkmVQn~~Qf~flY~~~~~l~~ 295 (302)
T COG5599 241 LLRMPNDTLNHT--D---TWE----------DTQDLIFQIVLSLRSQRMKMVQNKTQFKFLYDAFLELNK 295 (302)
T ss_pred HHhccccccCCC--c---hhh----------hhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 998865442110 0 000 114678899999999999999999999999999998873
No 27
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=99.76 E-value=3.8e-20 Score=188.19 Aligned_cols=120 Identities=32% Similarity=0.484 Sum_probs=92.5
Q ss_pred hhHHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhhh-cCCCEEEeccCCcCCccee
Q psy8517 45 PYTYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIK-KHGPVVVHCSAGIGRTGTF 123 (614)
Q Consensus 45 ~~~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~~-~~~pv~VHCs~GvgRsg~f 123 (614)
..+|+.+.|.+++ ...++.|.|.||||++||++..+.... .....+..+..... ..+||+|||++|+||||+|
T Consensus 137 ~~~~~~~~l~v~~---~~~~~~~~v~~~~y~~W~d~~~P~~~~---~~~~~i~~v~~~~~~~~~pivVHC~~G~gRsg~f 210 (258)
T smart00194 137 VDDYTIRTLEVTN---TGCSETRTVTHYHYTNWPDHGVPESPK---SILDLVRAVRKSQSTSTGPIVVHCSAGVGRTGTF 210 (258)
T ss_pred cCCEEEEEEEEEE---CCCCCcEEEEEEeeCCCCCCCCCCCHH---HHHHHHHHHHHhhccCCCCEEEEeCCCCCccchh
Confidence 4567777777776 244699999999999999765442211 11111222221111 1789999999999999999
Q ss_pred eeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHH
Q psy8517 124 IVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQ 194 (614)
Q Consensus 124 ~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~ 194 (614)
|+++++++++..++ .+++.++++.+|++|++||++.+||.|||++++
T Consensus 211 ~a~~~~~~~l~~~~------------------------~v~v~~~v~~lR~~R~~~v~~~~Qy~f~~~~l~ 257 (258)
T smart00194 211 IAIDILLQQLEAGK------------------------EVDIFEIVKELRSQRPGMVQTEEQYIFLYRAIL 257 (258)
T ss_pred hHHHHHHHHHHHcC------------------------CCCHHHHHHHHHhccccccCCHHHHHHHHHHHh
Confidence 99999999998876 588999999999999999999999999999985
No 28
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=99.74 E-value=6.2e-20 Score=183.55 Aligned_cols=120 Identities=31% Similarity=0.473 Sum_probs=93.9
Q ss_pred hhHHHHHHHHhhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhh--hcCCCEEEeccCCcCCcce
Q psy8517 45 PYTYLLIWLGLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQI--KKHGPVVVHCSAGIGRTGT 122 (614)
Q Consensus 45 ~~~~~~t~l~l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~--~~~~pv~VHCs~GvgRsg~ 122 (614)
...|+.+.|.|++ ...++.|.|.||||++||+...+..... ...++..+.... ...+||+|||++|+||||+
T Consensus 109 ~~~~~~~~l~i~~---~~~~~~~~V~~~~~~~W~d~~~p~~~~~---~~~~~~~v~~~~~~~~~~pivVHC~~G~gRsg~ 182 (231)
T cd00047 109 LDDYTVRTLKLSN---TGTGETRTVTHFQYTGWPDHGVPESPDS---LLDLLRKVRKSQQQPGSGPIVVHCSAGVGRTGT 182 (231)
T ss_pred cCCEEEEEEEEEE---CCCCCceEEEEEeECCCCCCCccCChHH---HHHHHHHHHHHhccCCCCCeEEECCCCCCccch
Confidence 4677777888887 2348999999999999997654433211 111122222121 2478999999999999999
Q ss_pred eeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHH
Q psy8517 123 FIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQ 194 (614)
Q Consensus 123 f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~ 194 (614)
|||++++++++..++ .+++.+++.++|++|+++|++.+||.|||.+++
T Consensus 183 ~~a~~~~~~~~~~~~------------------------~~~~~~~v~~iR~~R~~~v~~~~Qy~f~~~~l~ 230 (231)
T cd00047 183 FIAIDILLQRLEAEG------------------------VVDIFQTVKELRSQRPGMVQTEEQYIFLYRAIL 230 (231)
T ss_pred HHHHHHHHHHHHhcC------------------------CCCHHHHHHHHHhccccccCCHHHHHHHHHHHh
Confidence 999999999998876 588999999999999999999999999999985
No 29
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=99.70 E-value=2.4e-18 Score=149.47 Aligned_cols=100 Identities=34% Similarity=0.554 Sum_probs=77.3
Q ss_pred cccccccCCCCeEEeCCCCCCcccEEEehHHHHHhh---hcCCCEEEeccCCcCCcceeeeHHHHHHHHHhc-CCCccch
Q psy8517 68 TNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQI---KKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKH-GLDCEID 143 (614)
Q Consensus 68 ~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~---~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~-~~~~~~~ 143 (614)
.+.||+|++||+...+.... ....+++.+.... ...+||+|||++|+||||+||+++.++.++... +
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~---~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~------ 71 (105)
T smart00404 1 TVKHYHYTGWPDHGVPESPD---SILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETG------ 71 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHH---HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCC------
Confidence 36899999999764443321 1112223332222 236899999999999999999999999988765 3
Q ss_pred HHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHH
Q psy8517 144 IQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQ 194 (614)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~ 194 (614)
.+++.+++..+|++|++++++.+||.|+|.+++
T Consensus 72 ------------------~~~~~~~~~~ir~~r~~~~~~~~q~~~~~~~~~ 104 (105)
T smart00404 72 ------------------EVDIFQTVKELRKQRPGMVQTFEQYLFLYRALL 104 (105)
T ss_pred ------------------CCCHHHHHHHHHhhhhhhCCcHHHHHHHHHHHh
Confidence 588899999999999999999999999999875
No 30
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=99.70 E-value=2.4e-18 Score=149.47 Aligned_cols=100 Identities=34% Similarity=0.554 Sum_probs=77.3
Q ss_pred cccccccCCCCeEEeCCCCCCcccEEEehHHHHHhh---hcCCCEEEeccCCcCCcceeeeHHHHHHHHHhc-CCCccch
Q psy8517 68 TNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQI---KKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKH-GLDCEID 143 (614)
Q Consensus 68 ~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~---~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~-~~~~~~~ 143 (614)
.+.||+|++||+...+.... ....+++.+.... ...+||+|||++|+||||+||+++.++.++... +
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~---~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~------ 71 (105)
T smart00012 1 TVKHYHYTGWPDHGVPESPD---SILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETG------ 71 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHH---HHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCC------
Confidence 36899999999764443321 1112223332222 236899999999999999999999999988765 3
Q ss_pred HHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHH
Q psy8517 144 IQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQ 194 (614)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~ 194 (614)
.+++.+++..+|++|++++++.+||.|+|.+++
T Consensus 72 ------------------~~~~~~~~~~ir~~r~~~~~~~~q~~~~~~~~~ 104 (105)
T smart00012 72 ------------------EVDIFQTVKELRKQRPGMVQTFEQYLFLYRALL 104 (105)
T ss_pred ------------------CCCHHHHHHHHHhhhhhhCCcHHHHHHHHHHHh
Confidence 588899999999999999999999999999875
No 31
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=99.67 E-value=2.1e-16 Score=129.83 Aligned_cols=76 Identities=46% Similarity=0.690 Sum_probs=67.6
Q ss_pred hhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCe-eecCCCccccCHHHHHHhc
Q psy8517 241 QFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEK-YDVGGGEQFDSLTQLIEHY 316 (614)
Q Consensus 241 ~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~-~~~~~~~~F~sl~eLV~~y 316 (614)
|||+.+.+.+||++|....++|+||||+|.+.+|.|+||++.+++++|++|.+.++. |.+.++..|+||.+||+||
T Consensus 1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y 77 (77)
T PF00017_consen 1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY 77 (77)
T ss_dssp TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence 455555566999999975799999999999999999999999999999999996554 8888889999999999997
No 32
>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Probab=99.67 E-value=3.1e-16 Score=133.88 Aligned_cols=92 Identities=43% Similarity=0.720 Sum_probs=77.8
Q ss_pred hhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCeeecCC-CccccCHHHHHHhcccC
Q psy8517 241 QFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG-GEQFDSLTQLIEHYKRN 319 (614)
Q Consensus 241 ~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~-~~~F~sl~eLV~~y~~~ 319 (614)
|||+.+.+.+||++|.. .++|+||||.|.+.+|.|+||++.+++++|++|...++.+.+.. ...|.|+.+||+||..+
T Consensus 2 w~~g~i~r~~Ae~~L~~-~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y~~~ 80 (94)
T cd00173 2 WYHGPISREEAEELLKK-KPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHYQKN 80 (94)
T ss_pred ccccCCCHHHHHHHHhc-CCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHHHHHhhC
Confidence 55555666699999986 79999999999999999999999999999999999766655554 89999999999999998
Q ss_pred CeecccCeEEEecCCc
Q psy8517 320 PMVETSGTVVHLKQPF 335 (614)
Q Consensus 320 ~l~~~~g~~~~L~~P~ 335 (614)
++ ..+..+.|+.|+
T Consensus 81 ~~--~~~~~~~L~~p~ 94 (94)
T cd00173 81 PL--SDGLGVKLRYPV 94 (94)
T ss_pred cc--CCCcccEeCCcC
Confidence 87 455667777764
No 33
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=99.64 E-value=3.3e-17 Score=173.17 Aligned_cols=104 Identities=14% Similarity=0.163 Sum_probs=72.8
Q ss_pred CccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhhh---------cCCCEEEeccCCcCCcceeeeHHHHHHHHH
Q psy8517 64 PRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIK---------KHGPVVVHCSAGIGRTGTFIVIDMILDQIK 134 (614)
Q Consensus 64 ~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~~---------~~~pv~VHCs~GvgRsg~f~~id~~~~~~~ 134 (614)
+..+.|.||||++||++..+..... ....++.+..... +.++++||||||+||||+|||++.+ .
T Consensus 418 E~R~tV~QFHyTnWPDHGVPpST~~---LleLvr~Vr~~~q~~~~~~~~~nk~~PVVHCSAGVGRTGTFIAi~ll----k 490 (535)
T PRK15375 418 EKRYTIPVLHVKNWPDHQPLPSTDQ---LEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVL----K 490 (535)
T ss_pred CceeEEEEEEeCCCCCCCCCCChHH---HHHHHHHHHHhhhcccccccccCCCCceEEcCCCCchHHHHHHHHHH----h
Confidence 3344899999999998765433211 1011122221111 1123489999999999999999763 2
Q ss_pred hcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccC-CccChHHHHHHHHHHHHHHH
Q psy8517 135 KHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSG-MVQTEAQYKFVYLAVQHYIQ 198 (614)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~-~Vqt~~Qy~f~y~~v~~~i~ 198 (614)
.+. .+++.++|..+|.+|++ |||+.+||.+++++-...+.
T Consensus 491 ~~~------------------------~~sle~IV~dlR~qRng~MVQt~eQy~~l~~~~~~~~~ 531 (535)
T PRK15375 491 DNP------------------------HSNLEQVRADFRNSRNNRMLEDASQFVQLKAMQAQLLM 531 (535)
T ss_pred ccc------------------------cCCHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHhh
Confidence 222 47899999999999999 99999999999998766654
No 34
>smart00252 SH2 Src homology 2 domains. Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.
Probab=99.63 E-value=1.1e-15 Score=127.72 Aligned_cols=80 Identities=44% Similarity=0.735 Sum_probs=69.8
Q ss_pred hhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecC-CeeecCCCccccCHHHHHHhcccC
Q psy8517 241 QFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQA-EKYDVGGGEQFDSLTQLIEHYKRN 319 (614)
Q Consensus 241 ~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~eLV~~y~~~ 319 (614)
|||+.+.+.+||++|... ++|+||||.|++.+|.|+||++.++.++|++|...+ +.|.+.+...|.|+.+||+||+.+
T Consensus 3 w~~g~i~r~~Ae~lL~~~-~~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y~~~ 81 (84)
T smart00252 3 WYHGFISREEAEKLLKNE-GDGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHYQKN 81 (84)
T ss_pred eecccCCHHHHHHHHhcC-CCcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHHhhC
Confidence 445455566999999864 599999999999899999999999999999999976 789998889999999999999877
Q ss_pred Ce
Q psy8517 320 PM 321 (614)
Q Consensus 320 ~l 321 (614)
++
T Consensus 82 ~~ 83 (84)
T smart00252 82 SL 83 (84)
T ss_pred CC
Confidence 63
No 35
>KOG0793|consensus
Probab=99.63 E-value=3.7e-16 Score=166.74 Aligned_cols=118 Identities=30% Similarity=0.468 Sum_probs=88.8
Q ss_pred hhhhhhccCCccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhhh----cCCCEEEeccCCcCCcceeeeHHHHH
Q psy8517 55 LADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIK----KHGPVVVHCSAGIGRTGTFIVIDMIL 130 (614)
Q Consensus 55 l~d~~~~~~~~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~~----~~~pv~VHCs~GvgRsg~f~~id~~~ 130 (614)
|+| +++.+.|+|.+|||..||.-+.+ .... -.+|......+ ...||+||||+|.|||||||+||+++
T Consensus 881 LKN---lqtseTRTvTQFHfLSWp~egvP-----asar-slLdFRRKVNK~YRGRScpIiVH~sdGaGRTG~YiliDmvl 951 (1004)
T KOG0793|consen 881 LKN---LQTSETRTVTQFHFLSWPDEGVP-----ASAR-SLLDFRRKVNKCYRGRSCPIIVHCSDGAGRTGTYILIDMVL 951 (1004)
T ss_pred Hhh---cccccceeeeeeeeecccccCCc-----cchH-HHHHHHHHhhhhccCCCCceEEEccCCCCccceeeeHHHHH
Confidence 556 48899999999999999954333 2111 12233332222 23599999999999999999999999
Q ss_pred HHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHHHHHHHHhhhh
Q psy8517 131 DQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRL 204 (614)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~~~i~~~~~~l 204 (614)
..+.++. .+||| ..++..||.||+|||+|.+||.|++.||++-++.+++.|
T Consensus 952 ~Rm~kGa--keIDI---------------------aATlEHlRDQR~GmVaTkdQFef~l~aVAeEVnaiLKal 1002 (1004)
T KOG0793|consen 952 NRMAKGA--KEIDI---------------------AATLEHLRDQRPGMVATKDQFEFALTAVAEEVNAILKAL 1002 (1004)
T ss_pred HHHhccc--hhhhH---------------------HHHHHHHhhcCCcceeehhhhHHHHHHHHHHHHHHHHhc
Confidence 9998764 24444 445555699999999999999999999999887776654
No 36
>KOG4226|consensus
Probab=99.63 E-value=7.9e-16 Score=147.92 Aligned_cols=100 Identities=27% Similarity=0.577 Sum_probs=90.8
Q ss_pred hhhhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCeeecCCCccccCHHHHHHh
Q psy8517 236 LSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEH 315 (614)
Q Consensus 236 ~~e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~eLV~~ 315 (614)
+....|||+.+.|.+||.+|..+|.+|+||||+|+++||+|++|++..+..+||+++..++.|.+ |.++|.++.+||+|
T Consensus 278 ~ag~~WYyG~itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq~~d~~ycI-GqRkF~tmd~Lv~H 356 (379)
T KOG4226|consen 278 FAGRPWYYGNITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQLVDNVYCI-GQRKFHTMDELVEH 356 (379)
T ss_pred ccCCcceeccccHHHHHHHHhccCccCceEEecCCCCCcceeEEeeccCCCcceEEEEecceEEe-ccceeccHHHHHHh
Confidence 66778999999999999999999999999999999999999999999999999999998888887 66999999999999
Q ss_pred cccCCeecc-cCeEEEecCCcc
Q psy8517 316 YKRNPMVET-SGTVVHLKQPFN 336 (614)
Q Consensus 316 y~~~~l~~~-~g~~~~L~~P~~ 336 (614)
|++-|+-.. .|..+.|..+++
T Consensus 357 Y~kaPIfts~qgEKLyLvr~Lp 378 (379)
T KOG4226|consen 357 YKKAPIFTSEQGEKLYLVRALP 378 (379)
T ss_pred hhcCCceecCCCceEEEeccCC
Confidence 999986544 478888887764
No 37
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=99.61 E-value=3.6e-17 Score=163.41 Aligned_cols=121 Identities=30% Similarity=0.486 Sum_probs=89.6
Q ss_pred hhHHHHHHHHhhhhhhccCC-ccccccccccCCCCeEEeCCCCCCcccEEEehHHHHHhh-hcCCCEEEeccCCcCCcce
Q psy8517 45 PYTYLLIWLGLADLFLIYSP-RDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQI-KKHGPVVVHCSAGIGRTGT 122 (614)
Q Consensus 45 ~~~~~~t~l~l~d~~~~~~~-~~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~~~~~-~~~~pv~VHCs~GvgRsg~ 122 (614)
+.+|+...|.+++ ...+ +.|.+.||||+.||.+..+.... ..+..++.+.... ...+|++|||++|+||||+
T Consensus 113 ~~~~~~~~l~v~~---~~~~~~~~~v~~~~~~~W~~~~~P~~~~---~~~~~~~~v~~~~~~~~~pivVhc~~G~gRsg~ 186 (235)
T PF00102_consen 113 SKHYTVRKLEVTN---GKSKKKSRTVTHFHYTNWPDDGVPPSPE---SFLDFIRKVNKSKDDPNGPIVVHCSDGVGRSGT 186 (235)
T ss_dssp ESSEEEEEEEEEE---TTTTEEEEEEEEEEEESSSSSSSGSSSH---HHHHHHHHHHHHHSTTSSEEEEESSSSSHHHHH
T ss_pred ccceEEeeccccc---cccccccccccceeeeeccccccccccc---hhhhhhhhccccccCCccceEeecccccccccc
Confidence 3445555556666 1233 36899999999999654332211 1111222222222 3458999999999999999
Q ss_pred eeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHHH
Q psy8517 123 FIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQH 195 (614)
Q Consensus 123 f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~~ 195 (614)
||+++++++++..++ .+++.++++.||++|+++|++.+||.|||.+++|
T Consensus 187 f~~~~~~~~~~~~~~------------------------~~~v~~~~~~lR~~R~~~i~~~~qy~f~~~~~~e 235 (235)
T PF00102_consen 187 FCAIDILIEQLKKEG------------------------EVDVFEIVKKLRQQRPGAIQSPEQYRFCYMAVLE 235 (235)
T ss_dssp HHHHHHHHHHHHHHS------------------------EECHHHHHHHHHTTSTTSSSSHHHHHHHHHHHHH
T ss_pred cccchhhcccccccc------------------------chhhHHHHHHHHhhCCCccCCHHHHHHHHHHHhC
Confidence 999999999999877 4888889999999999999999999999999975
No 38
>KOG0789|consensus
Probab=99.55 E-value=1.2e-15 Score=165.82 Aligned_cols=105 Identities=27% Similarity=0.399 Sum_probs=80.6
Q ss_pred cccccccccCCCCeEEeCCCCCCcccEEEehHHH----HHhhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCcc
Q psy8517 66 DQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMI----LDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCE 141 (614)
Q Consensus 66 ~R~i~h~~yt~WP~~~~~s~~v~~~~~f~~ld~~----~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~ 141 (614)
.+.+.||||++||+++.+.... .++..+ .......+|++||||+|+||||||+++|+++.++...+.
T Consensus 261 ~~~v~~~~~~~WPd~~~p~~~~------~~l~~~~~~~~~~~~~~~P~vVhcsaG~gRtgt~v~~~~~~~~~~~~~~--- 331 (415)
T KOG0789|consen 261 SSSVVHYHYINWPDHGAPDSVK------SILPLLRQSVLELRPKQEPIEVHCSAGAGRAGTLVLIEHALIELQGPEG--- 331 (415)
T ss_pred cceEEEEeeCCCccccCCcchH------HHHHHHHhhhhhhcCCCCCeEEECCCCCCccchHHHHHHHHHHHhcCCC---
Confidence 3589999999999863322211 122222 223335689999999999999999999988888764332
Q ss_pred chHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHHHHHHHH
Q psy8517 142 IDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQT 199 (614)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v~~~i~~ 199 (614)
..++..+++.+|.||.++|||..||.|+|+++++|+..
T Consensus 332 --------------------~~~~~~~~~~iR~qR~~~vqt~~Qy~f~~~~~~~~~~~ 369 (415)
T KOG0789|consen 332 --------------------EPPIDEILREIRYQRPGAVQSPLQYLFIYAATLKYIKK 369 (415)
T ss_pred --------------------CccHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Confidence 35566677788999999999999999999999999975
No 39
>KOG4278|consensus
Probab=99.43 E-value=2.1e-13 Score=145.34 Aligned_cols=99 Identities=30% Similarity=0.464 Sum_probs=82.2
Q ss_pred CChhhhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeec-CCeeecCCCccccCHHHH
Q psy8517 234 ATLSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQ-AEKYDVGGGEQFDSLTQL 312 (614)
Q Consensus 234 ~~~~e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~-~~~~~~~~~~~F~sl~eL 312 (614)
-+|+-..|||+.+.|..||-+| +.+.+|+||||+|++.||+|++|+|++|.|+||+|.-+ +++.++.....|.+|.||
T Consensus 147 NSLeKhsWYHGpvSRsaaEy~L-sSgInGSFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~dgK~yvt~EsrF~TLaEL 225 (1157)
T KOG4278|consen 147 NSLEKHSWYHGPVSRSAAEYIL-SSGINGSFLVRESESSPGQYSISLRYEGRVYHYRINTDNDGKMYVTQESRFRTLAEL 225 (1157)
T ss_pred cchhhcccccCccccchhhhhh-hcCcccceEEeeccCCCcceeEEEEecceEEEEEeeccCCccEEEeehhhhhHHHHH
Confidence 3444455555555555666555 57799999999999999999999999999999999984 677888888999999999
Q ss_pred HHhcccCCeecccCeEEEecCCccc
Q psy8517 313 IEHYKRNPMVETSGTVVHLKQPFNA 337 (614)
Q Consensus 313 V~~y~~~~l~~~~g~~~~L~~P~~~ 337 (614)
|+|+.... +|+.+.|.+|-+.
T Consensus 226 VHHHStvA----DGLittLhYPApK 246 (1157)
T KOG4278|consen 226 VHHHSTVA----DGLITTLHYPAPK 246 (1157)
T ss_pred Hhhccccc----cceeEeeeccCcc
Confidence 99998776 8999999998765
No 40
>KOG1264|consensus
Probab=99.32 E-value=3.2e-12 Score=138.83 Aligned_cols=100 Identities=34% Similarity=0.561 Sum_probs=84.0
Q ss_pred hhccc-CCch-HHHHHHHcc-----CCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeec--C--CeeecCCCccccCH
Q psy8517 241 QFYME-NQGK-EAEQLILQK-----GKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQ--A--EKYDVGGGEQFDSL 309 (614)
Q Consensus 241 ~~y~~-~~~~-eae~lL~~~-----~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~--~--~~~~~~~~~~F~sl 309 (614)
.|||| .-+| +||+||++. ++||+||||+|+..+|+|+||.+++|+|.|++|+.. + -+|++.+.-.|+||
T Consensus 535 ~WFHgkle~R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdsl 614 (1267)
T KOG1264|consen 535 KWFHGKLEGRTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSL 614 (1267)
T ss_pred hhhhcccccchHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHH
Confidence 45555 5425 999999855 599999999999999999999999999999999973 3 37999999999999
Q ss_pred HHHHHhcccCCeecccCeEEEecCCccccccc
Q psy8517 310 TQLIEHYKRNPMVETSGTVVHLKQPFNATRIT 341 (614)
Q Consensus 310 ~eLV~~y~~~~l~~~~g~~~~L~~P~~~t~~~ 341 (614)
-+||.||+.+.|.- +...+.|+.|++.+.+.
T Consensus 615 Y~LI~~Y~~~~Lr~-aeF~m~LtePvPqp~~H 645 (1267)
T KOG1264|consen 615 YALIQHYRETHLRC-AEFEMRLTEPVPQPNPH 645 (1267)
T ss_pred HHHHHHHHhccccc-cceEEEecCCCCCCCcc
Confidence 99999999988643 45678899999876543
No 41
>KOG4637|consensus
Probab=99.27 E-value=5.1e-12 Score=126.79 Aligned_cols=98 Identities=26% Similarity=0.473 Sum_probs=82.4
Q ss_pred hhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCeeecCCCccccCHHHHHHhcccC
Q psy8517 240 VQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRN 319 (614)
Q Consensus 240 ~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~eLV~~y~~~ 319 (614)
..||+|.++|++..-.+...+||+||||+-.+-+|+|+|+++.+++++-++|...+|+|.+.+.-.|+|+.+||.||+..
T Consensus 23 a~WYWgdisReev~~~L~d~PDGsFlVRdAstm~GdYTLtl~k~g~~KLikI~h~DgKyGF~d~ltf~SVVelIn~yr~~ 102 (464)
T KOG4637|consen 23 AEWYWGDISREEVNKKLRDQPDGSFLVRDASTMQGDYTLTLRKGGNNKLIKIVHRDGKYGFSDPLTFNSVVELINHYRNE 102 (464)
T ss_pred ccccccccCHHHHHHHhcCCCCCcEEeeccccCCCceEEEEecCCccceeeeEEecCccCCCCchhhHHHHHHHHHHhhh
Confidence 35666666665544444577999999999988999999999999999999999999999999999999999999999998
Q ss_pred CeecccC-eEEEecCCccc
Q psy8517 320 PMVETSG-TVVHLKQPFNA 337 (614)
Q Consensus 320 ~l~~~~g-~~~~L~~P~~~ 337 (614)
+|..-+. +-+.|.+|+..
T Consensus 103 SL~~yN~~LDvrLlyPVs~ 121 (464)
T KOG4637|consen 103 SLAQYNPKLDVRLLYPVSR 121 (464)
T ss_pred HHHhhCcccceeeechHHH
Confidence 8765443 44889998764
No 42
>KOG4637|consensus
Probab=99.25 E-value=9.1e-12 Score=124.97 Aligned_cols=107 Identities=27% Similarity=0.420 Sum_probs=91.0
Q ss_pred CcccCChhhhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCeeecCCCc-cccC
Q psy8517 230 GEKFATLSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGE-QFDS 308 (614)
Q Consensus 230 ~~~~~~~~e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~~~-~F~s 308 (614)
.+..+.-.|..|++..+.++.||.||. +.++|+||||+| |..|.|+|||..++.|+|+.|.+...+|.+.... -+.|
T Consensus 323 ~~~~ph~~e~~w~~~~a~r~kAe~llr-g~~dGtFLIR~s-s~~g~yalSV~~~~~V~HClIy~tatG~GFa~pyn~y~t 400 (464)
T KOG4637|consen 323 DENLPHNDEKTWRVRDANRDKAEELLR-GKPDGTFLIRES-SKGGCYALSVVHDGEVKHCLIYQTATGFGFAEPYNLYST 400 (464)
T ss_pred cccCcchhhhHhHHhhhhHHHHHHHhc-CCCCCeEEEeec-cCCCceEEEEEECCceeeeEEeeccccccccchhHHHHH
Confidence 345567777888888888999999886 569999999995 6779999999999999999999988888887765 4599
Q ss_pred HHHHHHhcccCCeecccCeE-EEecCCcccc
Q psy8517 309 LTQLIEHYKRNPMVETSGTV-VHLKQPFNAT 338 (614)
Q Consensus 309 l~eLV~~y~~~~l~~~~g~~-~~L~~P~~~t 338 (614)
|.+||.||+..+|...++.. +.|+.|+...
T Consensus 401 lk~lV~hY~h~SLe~HnDal~ttLr~Pv~~~ 431 (464)
T KOG4637|consen 401 LKELVLHYQHTSLEQHNDALTTTLRYPVFAQ 431 (464)
T ss_pred HHHHHHHHhhhhHHhhccccccccccceecc
Confidence 99999999999999887755 7888887653
No 43
>KOG0197|consensus
Probab=99.20 E-value=3.2e-11 Score=128.26 Aligned_cols=110 Identities=37% Similarity=0.550 Sum_probs=91.6
Q ss_pred ccccCCCcccCChhhhhhhcccCCchHHHHHHH-ccCCCCcEEEeecCCCCCCeEEEEEeCC------eEEEEEEee-cC
Q psy8517 224 CYDLYGGEKFATLSELVQFYMENQGKEAEQLIL-QKGKNGSFLVRESQSKPGDFVLSVRTDD------KVTHVMIRC-QA 295 (614)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~~y~~~~~~eae~lL~-~~~~~G~FLvR~S~s~~g~~~LSv~~~~------~v~h~~I~~-~~ 295 (614)
+....+.+.+.+++...||++.+.|.+||+.|+ ...+.|+||||+|++.+|+|+||++..+ .|+|++|.. ++
T Consensus 66 v~~~~~~~~~~~l~~~~Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~ 145 (468)
T KOG0197|consen 66 VARNRGSPAFIKLSDEPWFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDG 145 (468)
T ss_pred eeccccCCCccccccCCchhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCC
Confidence 333335577888888889999999999996555 4448899999999999999999999877 999999999 45
Q ss_pred Ceee--cCCCccccCHHHHHHhcccCCeecccCeEEEecCCccc
Q psy8517 296 EKYD--VGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNA 337 (614)
Q Consensus 296 ~~~~--~~~~~~F~sl~eLV~~y~~~~l~~~~g~~~~L~~P~~~ 337 (614)
+.+. +.....|+++.+||.||+.+. .|....|..|+..
T Consensus 146 ~~~~~~~~~~~~F~~l~~lv~~~~~~~----~gl~~~l~~p~~~ 185 (468)
T KOG0197|consen 146 GGLYPYIDERELFSSLQQLVNYYSKNA----DGLCTRLRDPCSK 185 (468)
T ss_pred CCeecCCCHHHhhhhHHHHHhhhhccC----cchhhcccCchhc
Confidence 6566 888899999999999999886 6777888888865
No 44
>KOG2996|consensus
Probab=99.18 E-value=1.5e-11 Score=129.56 Aligned_cols=104 Identities=25% Similarity=0.430 Sum_probs=87.2
Q ss_pred CChhhhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCeeecCCCccccCHHHHH
Q psy8517 234 ATLSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLI 313 (614)
Q Consensus 234 ~~~~e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~eLV 313 (614)
..+.+..||-+..-|.+||..|. +.++|+||||.+....+.|++|+++++.|+|++|...+|++.+.+...|.|+.|||
T Consensus 680 ~d~s~~~WyaG~MERaqaes~Lk-~~~ngT~LVR~r~kea~e~AISikynnevKHikI~~~dg~~~i~E~k~F~sl~ELV 758 (865)
T KOG2996|consen 680 TDYSEFPWYAGEMERAQAESTLK-NRPNGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETNDGKVHITEDKKFNSLVELV 758 (865)
T ss_pred cchhhhhhhcchHhhhhhhhHhh-cCCCceEEEEecccchhheeEEEEeccccceEEEEecCCeEEechhhhhhhHHHHH
Confidence 44455555555555669999887 56999999999999999999999999999999999999999999999999999999
Q ss_pred HhcccCCeecccC-eEEEecCCcccc
Q psy8517 314 EHYKRNPMVETSG-TVVHLKQPFNAT 338 (614)
Q Consensus 314 ~~y~~~~l~~~~g-~~~~L~~P~~~t 338 (614)
+||+.++|.+.-. +-+.|+.|+..+
T Consensus 759 eyYq~~sLke~Fk~LDTtLk~Pyke~ 784 (865)
T KOG2996|consen 759 EYYQSHSLKEIFKALDTTLKFPYKEP 784 (865)
T ss_pred HHHHhccHHHHHHHhhhhhcCCCcCh
Confidence 9999999877633 336778776543
No 45
>KOG4792|consensus
Probab=99.16 E-value=7.2e-11 Score=111.30 Aligned_cols=101 Identities=34% Similarity=0.593 Sum_probs=78.4
Q ss_pred ccCChhhhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeec----CC----eeecCCC
Q psy8517 232 KFATLSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQ----AE----KYDVGGG 303 (614)
Q Consensus 232 ~~~~~~e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~----~~----~~~~~~~ 303 (614)
.|.+-+-..||+++.+|.||-++|. +...|.||||+|.+.||+|+|||+.+..|-||.|... ++ .+.+ |.
T Consensus 4 ~FD~~er~swYfg~mSRqeA~~lL~-~~r~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rI-gd 81 (293)
T KOG4792|consen 4 NFDSSERSSWYFGPMSRQEAVALLQ-GQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRI-GD 81 (293)
T ss_pred ccChhhccceecCcccHHHHHHHhc-CcceeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeee-cc
Confidence 3555566667777777879998887 4569999999999999999999999999999999982 11 3444 67
Q ss_pred ccccCHHHHHHhcccCCeecccCeEEEecCCccccc
Q psy8517 304 EQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATR 339 (614)
Q Consensus 304 ~~F~sl~eLV~~y~~~~l~~~~g~~~~L~~P~~~t~ 339 (614)
..|++|+.|.+||+-+-|... .|..|..+..
T Consensus 82 Q~Fd~lPaLL~fykihyLdtt-----tLi~p~~r~~ 112 (293)
T KOG4792|consen 82 QEFDSLPALLEFYKIHYLDTT-----TLIEPAKRSR 112 (293)
T ss_pred ccccchHHHHhheeEeeeccc-----cccccccccc
Confidence 899999999999987765432 4555554443
No 46
>KOG1264|consensus
Probab=99.04 E-value=3.1e-10 Score=123.78 Aligned_cols=97 Identities=22% Similarity=0.489 Sum_probs=80.6
Q ss_pred hhhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCeeecCCCccccCHHHHHHhc
Q psy8517 237 SELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHY 316 (614)
Q Consensus 237 ~e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~eLV~~y 316 (614)
+...|||....+.+||++|..-..||+|||| |...+..|+||.+.+|+++|++|.++|..|.+ |...|.+|.+||+||
T Consensus 646 e~k~W~~as~treqAE~mL~rvp~DGaFLiR-~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl-~t~~FesLv~lv~yY 723 (1267)
T KOG1264|consen 646 ESKPWYHASLTREQAEDMLMRVPRDGAFLIR-KREGSNSYAISFRARGKIKHCRINRDGRHFVL-GTSAFESLVELVSYY 723 (1267)
T ss_pred cCCccccccccHHHHHHHHhhCccCcceEEE-eccCCceEEEEEEEcCcEeEEEEccCceEEEe-ccHHHHHHHHHHHHH
Confidence 3445666667777999999988899999999 66778889999999999999999987666666 556799999999999
Q ss_pred ccCCeecccCeEEEecCCccccc
Q psy8517 317 KRNPMVETSGTVVHLKQPFNATR 339 (614)
Q Consensus 317 ~~~~l~~~~g~~~~L~~P~~~t~ 339 (614)
.++++.. .++|++|++...
T Consensus 724 ~k~~lyR----~mkLr~PVnee~ 742 (1267)
T KOG1264|consen 724 EKHPLYR----KMKLRYPVNEEL 742 (1267)
T ss_pred hcChhhh----cccccCcCCHHH
Confidence 9998764 378999987653
No 47
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=98.86 E-value=3.7e-10 Score=106.58 Aligned_cols=95 Identities=14% Similarity=0.190 Sum_probs=62.5
Q ss_pred ccccccCCCCeEEeCCCCCC-cccEEEehHHHHH-hhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHH
Q psy8517 69 NMKYSISAGPVVVHCSAGIG-RTGTFIVIDMILD-QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQR 146 (614)
Q Consensus 69 i~h~~yt~WP~~~~~s~~v~-~~~~f~~ld~~~~-~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~ 146 (614)
..+++|..||...+..+... ....+..++..+. ....++||+|||.+|+||||+||+++.+ ...
T Consensus 59 ~~gi~~~~~p~~D~~~P~~~~i~~~~~~i~~~~~~~~~~g~~V~VHC~aGigRSgt~~a~yL~----~~~---------- 124 (166)
T PTZ00242 59 KNGIEVHDWPFDDGAPPPKAVIDNWLRLLDQEFAKQSTPPETIAVHCVAGLGRAPILVALALV----EYG---------- 124 (166)
T ss_pred HCCCEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCeEEEECCCCCCHHHHHHHHHHH----HhC----------
Confidence 34788899996332222111 0111112222221 1245889999999999999999988743 222
Q ss_pred HHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHHHHHHHHHH
Q psy8517 147 TIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAV 193 (614)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Qy~f~y~~v 193 (614)
..++.+++..+|++|++++ +..|+.|+.+..
T Consensus 125 ---------------~~s~~eAi~~vr~~R~~~i-~~~Q~~~l~~~~ 155 (166)
T PTZ00242 125 ---------------GMEPLDAVGFVREKRKGAI-NQTQLQFLKKYK 155 (166)
T ss_pred ---------------CCCHHHHHHHHHHHCCCCc-hHHHHHHHHHHH
Confidence 2577888899999999999 589999987654
No 48
>KOG0194|consensus
Probab=98.81 E-value=1e-08 Score=110.73 Aligned_cols=101 Identities=30% Similarity=0.522 Sum_probs=84.3
Q ss_pred hhcccC-CchHHHHHHHccCCCCcEEEeecCCCCCC---e-EEEEEeC--CeEEEEEEeecCCeeecCCCccccCHHHHH
Q psy8517 241 QFYMEN-QGKEAEQLILQKGKNGSFLVRESQSKPGD---F-VLSVRTD--DKVTHVMIRCQAEKYDVGGGEQFDSLTQLI 313 (614)
Q Consensus 241 ~~y~~~-~~~eae~lL~~~~~~G~FLvR~S~s~~g~---~-~LSv~~~--~~v~h~~I~~~~~~~~~~~~~~F~sl~eLV 313 (614)
.||||. +|+||+.+|. .+|+||||.|+..+|. + .||+.+. .+++|+.|+..++.++..+...|.++.+||
T Consensus 50 ~~yHG~l~red~~~lL~---~~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~~li 126 (474)
T KOG0194|consen 50 PYYHGLLPREDAEKLLK---NDGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTISELV 126 (474)
T ss_pred ccccccccHhHHHHHhC---CCCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHHHHH
Confidence 566665 4558888887 6999999999988875 3 9999986 889999999988888888889999999999
Q ss_pred HhcccCCeecccCeEEEecCCccccccccccc
Q psy8517 314 EHYKRNPMVETSGTVVHLKQPFNATRITVSNI 345 (614)
Q Consensus 314 ~~y~~~~l~~~~g~~~~L~~P~~~t~~~~~~l 345 (614)
.||..+......+. ..|+.|+....|...|-
T Consensus 127 ~~~~~~~~~~~~~~-~~L~~PI~r~~Wel~H~ 157 (474)
T KOG0194|consen 127 NYYKFSKLEITGKN-FFLKRPIPRQKWELSHS 157 (474)
T ss_pred HHHHhcccceeccc-eeecccccccccEEecc
Confidence 99998876665543 48999999999888753
No 49
>KOG1720|consensus
Probab=98.51 E-value=6.1e-08 Score=91.61 Aligned_cols=62 Identities=27% Similarity=0.334 Sum_probs=52.7
Q ss_pred hcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccCh
Q psy8517 104 KKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTE 183 (614)
Q Consensus 104 ~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~ 183 (614)
.++|.|.|||-+|.||||+.+|..++... .++..+++..||..|+|||+++
T Consensus 145 ~~~g~iaVHCkaGlGRTG~liAc~lmy~~-----------------------------g~ta~eaI~~lR~~RpG~V~gp 195 (225)
T KOG1720|consen 145 EKGGKIAVHCKAGLGRTGTLIACYLMYEY-----------------------------GMTAGEAIAWLRICRPGAVIGP 195 (225)
T ss_pred HhcCeEEEEeccCCCchhHHHHHHHHHHh-----------------------------CCCHHHHHHHHHhcCCccccCH
Confidence 34899999999999999999998877653 3566778888999999999999
Q ss_pred HHHHHHHHHHH
Q psy8517 184 AQYKFVYLAVQ 194 (614)
Q Consensus 184 ~Qy~f~y~~v~ 194 (614)
+|+.++++-..
T Consensus 196 qQ~~l~~~q~~ 206 (225)
T KOG1720|consen 196 QQHKLLHKQRD 206 (225)
T ss_pred HHHHHHHHHHH
Confidence 99998887654
No 50
>KOG3601|consensus
Probab=98.50 E-value=2.4e-08 Score=94.16 Aligned_cols=81 Identities=32% Similarity=0.373 Sum_probs=68.7
Q ss_pred hhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecC-CeeecCCCccccCHHHHHHhc
Q psy8517 238 ELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQA-EKYDVGGGEQFDSLTQLIEHY 316 (614)
Q Consensus 238 e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~-~~~~~~~~~~F~sl~eLV~~y 316 (614)
.+.||++.+.+..||++|+. .++|+||+|.|++.||+|++|+++.++|.|+++.+++ ++|++ -..+|.++.+||+||
T Consensus 57 ~~~wve~~i~r~~ae~~l~~-~~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~l-w~skfnslnplv~Y~ 134 (222)
T KOG3601|consen 57 PHEWVEGLIPRPLAEDLLSK-KRDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFL-WSSKFNSLNPLVSYH 134 (222)
T ss_pred cccceecccccchhhhhhhc-cCcchhhhhhhhcCcccccccccCCCCceeccccccCcccccc-chhhccCCCCCcccC
Confidence 45566666777799999886 7999999999999999999999999999999998764 55554 347999999999999
Q ss_pred ccCC
Q psy8517 317 KRNP 320 (614)
Q Consensus 317 ~~~~ 320 (614)
..+.
T Consensus 135 rt~s 138 (222)
T KOG3601|consen 135 RTAS 138 (222)
T ss_pred cccc
Confidence 7765
No 51
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=98.32 E-value=8.7e-08 Score=93.86 Aligned_cols=60 Identities=27% Similarity=0.383 Sum_probs=47.4
Q ss_pred hhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCcc
Q psy8517 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQ 181 (614)
Q Consensus 102 ~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vq 181 (614)
....+++|+|||.+|+||||+++|...+- .| .+..+++..+|..|+++++
T Consensus 166 ~l~~g~~VaVHC~AGlGRTGtl~AayLI~-----~G-------------------------mspeeAI~~VR~~RPgAIn 215 (241)
T PTZ00393 166 VIKNNRAVAVHCVAGLGRAPVLASIVLIE-----FG-------------------------MDPIDAIVFIRDRRKGAIN 215 (241)
T ss_pred HHhcCCeEEEECCCCCCHHHHHHHHHHHH-----cC-------------------------CCHHHHHHHHHHHCCCCCC
Confidence 34567899999999999999998775431 23 4567788889999999995
Q ss_pred ChHHHHHHHHH
Q psy8517 182 TEAQYKFVYLA 192 (614)
Q Consensus 182 t~~Qy~f~y~~ 192 (614)
..|..|+.+.
T Consensus 216 -~~Q~~fL~~y 225 (241)
T PTZ00393 216 -KRQLQFLKAY 225 (241)
T ss_pred -HHHHHHHHHH
Confidence 6899887654
No 52
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=98.14 E-value=6.7e-07 Score=81.70 Aligned_cols=64 Identities=25% Similarity=0.320 Sum_probs=45.7
Q ss_pred HHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCc
Q psy8517 97 DMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNV 176 (614)
Q Consensus 97 d~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R 176 (614)
+.+......++||+|||.+|.||||++|+...+... + .++.++++.+|++|
T Consensus 72 ~~i~~~~~~~~~vlVHC~~G~~Rs~~~~~~~l~~~~----~-------------------------~~~~~a~~~vr~~r 122 (139)
T cd00127 72 DFIDDAREKGGKVLVHCLAGVSRSATLVIAYLMKTL----G-------------------------LSLREAYEFVKSRR 122 (139)
T ss_pred HHHHHHHhcCCcEEEECCCCCchhHHHHHHHHHHHc----C-------------------------CCHHHHHHHHHHHC
Confidence 444444556789999999999999999886655433 2 45566677778888
Q ss_pred cCCccChHHHHHH
Q psy8517 177 SGMVQTEAQYKFV 189 (614)
Q Consensus 177 ~~~Vqt~~Qy~f~ 189 (614)
+.+..+..+...+
T Consensus 123 ~~~~~~~~~~~~l 135 (139)
T cd00127 123 PIISPNAGFMRQL 135 (139)
T ss_pred CccCCCHHHHHHH
Confidence 8777776665543
No 53
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=97.91 E-value=5.3e-06 Score=75.82 Aligned_cols=65 Identities=25% Similarity=0.299 Sum_probs=46.9
Q ss_pred hHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCC
Q psy8517 96 IDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPN 175 (614)
Q Consensus 96 ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~ 175 (614)
.+.+......++||+|||.+|+||||++++...+... + .++.+++..+|..
T Consensus 68 ~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~~yl~~~~----~-------------------------~~~~~A~~~v~~~ 118 (138)
T smart00195 68 VEFIEDAEKKGGKVLVHCQAGVSRSATLIIAYLMKYR----N-------------------------LSLNDAYDFVKDR 118 (138)
T ss_pred HHHHHHHhcCCCeEEEECCCCCchHHHHHHHHHHHHh----C-------------------------CCHHHHHHHHHHH
Confidence 3444444567889999999999999999887654432 2 4556667777888
Q ss_pred ccCCccChHHHHHH
Q psy8517 176 VSGMVQTEAQYKFV 189 (614)
Q Consensus 176 R~~~Vqt~~Qy~f~ 189 (614)
|+.+..+..|..-+
T Consensus 119 R~~~~p~~~~~~qL 132 (138)
T smart00195 119 RPIISPNFGFLRQL 132 (138)
T ss_pred CCccCCCHhHHHHH
Confidence 88888787776544
No 54
>KOG1930|consensus
Probab=97.91 E-value=2.8e-05 Score=80.39 Aligned_cols=80 Identities=24% Similarity=0.365 Sum_probs=62.7
Q ss_pred hhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEe----------C-----CeEEEEEEeecCCeeecCC--
Q psy8517 240 VQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRT----------D-----DKVTHVMIRCQAEKYDVGG-- 302 (614)
Q Consensus 240 ~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~----------~-----~~v~h~~I~~~~~~~~~~~-- 302 (614)
.||-..+.|.+|.+||+ ...+|+||||+|.+-+|.|=|.++. + +-|+||.|...-++..+.|
T Consensus 213 yWYKP~isREQAIalLr-dkePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGVkLKGC~ 291 (483)
T KOG1930|consen 213 YWYKPNISREQAIALLR-DKEPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGVKLKGCD 291 (483)
T ss_pred cccCCCCCHHHHHHHhh-cCCCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCceeccCCC
Confidence 34444566668888886 4589999999999999999888873 1 3489999999777777766
Q ss_pred -CccccCHHHHHHhcccCC
Q psy8517 303 -GEQFDSLTQLIEHYKRNP 320 (614)
Q Consensus 303 -~~~F~sl~eLV~~y~~~~ 320 (614)
...|.+|..||-.+.-.+
T Consensus 292 nEP~FGSLSALV~QHSIt~ 310 (483)
T KOG1930|consen 292 NEPVFGSLSALVYQHSITA 310 (483)
T ss_pred CCCccchhHHHHhhccchh
Confidence 679999999997665444
No 55
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=97.89 E-value=7.1e-06 Score=78.71 Aligned_cols=72 Identities=33% Similarity=0.422 Sum_probs=51.9
Q ss_pred ehHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCC
Q psy8517 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYP 174 (614)
Q Consensus 95 ~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~ 174 (614)
+++.+......++.|+|||..|+|||||+++...++.. +. ....+++.-+|.
T Consensus 94 ~v~~i~~~~~~g~kVvVHC~~GigRSgtviaA~lm~~~----~~------------------------~~~~~~i~~~~~ 145 (180)
T COG2453 94 IVDFIEEALSKGKKVVVHCQGGIGRSGTVIAAYLMLYG----GL------------------------SLADEAIAVKRR 145 (180)
T ss_pred HHHHHHHHHhcCCeEEEEcCCCCchHHHHHHHHHHHHc----CC------------------------CCHHHHHHHHHh
Confidence 44555556677779999999999999999998777653 11 122233344566
Q ss_pred CccCCccChHHHHHHHHHHH
Q psy8517 175 NVSGMVQTEAQYKFVYLAVQ 194 (614)
Q Consensus 175 ~R~~~Vqt~~Qy~f~y~~v~ 194 (614)
.|+++|.+..|+.|..+...
T Consensus 146 ~r~~~v~~~~q~~~~~e~~~ 165 (180)
T COG2453 146 RRPGAVVTEIQHLFELEQEL 165 (180)
T ss_pred cCCcccccHHHHHHHHHHHH
Confidence 67779999999999887654
No 56
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=97.74 E-value=8.5e-06 Score=73.89 Aligned_cols=68 Identities=22% Similarity=0.365 Sum_probs=48.9
Q ss_pred ehHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCC
Q psy8517 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYP 174 (614)
Q Consensus 95 ~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~ 174 (614)
+.+.+......+++|+|||.+|+||||++++...+... + .++.++++.+|.
T Consensus 62 ~~~~i~~~~~~~~~VlVHC~~G~~RS~~v~~ayLm~~~----~-------------------------~~~~~A~~~v~~ 112 (133)
T PF00782_consen 62 AVEFIENAISEGGKVLVHCKAGLSRSGAVAAAYLMKKN----G-------------------------MSLEEAIEYVRS 112 (133)
T ss_dssp HHHHHHHHHHTTSEEEEEESSSSSHHHHHHHHHHHHHH----T-------------------------SSHHHHHHHHHH
T ss_pred HHHhhhhhhcccceeEEEeCCCcccchHHHHHHHHHHc----C-------------------------CCHHHHHHHHHH
Confidence 34444445667889999999999999999887665533 2 455566667777
Q ss_pred CccCCccChHHHHHHHH
Q psy8517 175 NVSGMVQTEAQYKFVYL 191 (614)
Q Consensus 175 ~R~~~Vqt~~Qy~f~y~ 191 (614)
.|+.+..+..|+..+++
T Consensus 113 ~rp~~~~~~~~~~~L~~ 129 (133)
T PF00782_consen 113 RRPQINPNPSFIRQLYE 129 (133)
T ss_dssp HSTTSTHHHHHHHHHHH
T ss_pred HCCCCCCCHHHHHHHHH
Confidence 88888777777665553
No 57
>KOG3697|consensus
Probab=97.31 E-value=0.00019 Score=70.80 Aligned_cols=95 Identities=16% Similarity=0.238 Sum_probs=75.1
Q ss_pred hhhhccc-CCchHHHHHHHccCCCCcEEEeec-----------------------------------------------C
Q psy8517 239 LVQFYME-NQGKEAEQLILQKGKNGSFLVRES-----------------------------------------------Q 270 (614)
Q Consensus 239 ~~~~y~~-~~~~eae~lL~~~~~~G~FLvR~S-----------------------------------------------~ 270 (614)
-..|||| ..+++++.+|. .+|.|++|.+ .
T Consensus 200 k~pp~~g~l~~~~~q~~l~---~~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~~rd~~~~~ 276 (345)
T KOG3697|consen 200 KMPPPGGFLDTRLKQRPLA---PDAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIPRRDLFDET 276 (345)
T ss_pred cCCCCCCccchhhhhccCC---cccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccchhhhcccc
Confidence 3345665 55568888887 8899998864 3
Q ss_pred CCCCCeEEEEEeCCeEEEEEEeecCCeeecCCCccccCHHHHHHhcccCCeecc-cCeEEEecCCccc
Q psy8517 271 SKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVET-SGTVVHLKQPFNA 337 (614)
Q Consensus 271 s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~~~~F~sl~eLV~~y~~~~l~~~-~g~~~~L~~P~~~ 337 (614)
.+||+|+|.-...++.+|..+...+|-... -++.|+|++.||.|+..+.|+.. .|+.++|++|+..
T Consensus 277 ~~~gqyvltgl~~~~~khlllvdpegvvrt-kd~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r 343 (345)
T KOG3697|consen 277 TTPGQYVLTGLQSGQPKHLLLVDPEGVVRT-KDRRFDSISHLINYHMDNHLPIISAGSELCLQQPVER 343 (345)
T ss_pred CCCccEEEecccCCCcceEEEECCccceec-ccchhhHHHHHHHHhhhccCceecCcchhhhhCcccc
Confidence 567889999999999999998877776554 35899999999999999888665 5666889988764
No 58
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=97.18 E-value=0.00041 Score=59.46 Aligned_cols=34 Identities=44% Similarity=1.053 Sum_probs=30.8
Q ss_pred eEEEEeecccCCCCCCCChhHHHHHHHHHhhccc
Q psy8517 576 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 609 (614)
Q Consensus 576 ~i~h~~~~~WPDhGvP~~p~~~l~f~~~v~~~~~ 609 (614)
.+.||||+.|||+++|+.+..+++|++.|+....
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~ 34 (105)
T smart00404 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLN 34 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999987643
No 59
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=97.18 E-value=0.00041 Score=59.46 Aligned_cols=34 Identities=44% Similarity=1.053 Sum_probs=30.8
Q ss_pred eEEEEeecccCCCCCCCChhHHHHHHHHHhhccc
Q psy8517 576 KIYHYHFQAWPDHGVPSDPGCVLNFLYEVNTRQD 609 (614)
Q Consensus 576 ~i~h~~~~~WPDhGvP~~p~~~l~f~~~v~~~~~ 609 (614)
.+.||||+.|||+++|+.+..+++|++.|+....
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~ 34 (105)
T smart00012 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLN 34 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999987643
No 60
>KOG3751|consensus
Probab=97.00 E-value=0.00037 Score=74.23 Aligned_cols=88 Identities=36% Similarity=0.416 Sum_probs=72.2
Q ss_pred cCChhhhhhhcccCCchHHHHHHHccC-CCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeec--CCeeecC---CCccc
Q psy8517 233 FATLSELVQFYMENQGKEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQ--AEKYDVG---GGEQF 306 (614)
Q Consensus 233 ~~~~~e~~~~y~~~~~~eae~lL~~~~-~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~--~~~~~~~---~~~~F 306 (614)
+++.....|||+.+.+.|+-.+++..| .+|.||+|+|.++|-.|+++.-...+|+|++|... ++..++. |...|
T Consensus 513 ~~~h~sq~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g~t~~ 592 (622)
T KOG3751|consen 513 QAIHRSQTWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDGPTKF 592 (622)
T ss_pred hhhcccccCcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCCCccc
Confidence 455555668888888889999888777 99999999999999999999999999999999873 3432222 46799
Q ss_pred cCHHHHHHhcccCC
Q psy8517 307 DSLTQLIEHYKRNP 320 (614)
Q Consensus 307 ~sl~eLV~~y~~~~ 320 (614)
.++.+||++|+-++
T Consensus 593 sd~~ql~~~~ql~k 606 (622)
T KOG3751|consen 593 SDLIQLVEFYQLNK 606 (622)
T ss_pred cccccccchhhcCC
Confidence 99999999998663
No 61
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=96.77 E-value=0.0036 Score=61.40 Aligned_cols=76 Identities=20% Similarity=0.479 Sum_probs=54.4
Q ss_pred hhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCe-EEEEEEeecC--CeeecC-----CCccccCHHHH
Q psy8517 241 QFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDK-VTHVMIRCQA--EKYDVG-----GGEQFDSLTQL 312 (614)
Q Consensus 241 ~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~-v~h~~I~~~~--~~~~~~-----~~~~F~sl~eL 312 (614)
+-|+.....+||+.|.. ...|.++||+|...+.-.+++++..++ ..|+-|...+ ..+.++ |+..|.+|+||
T Consensus 39 P~F~n~~~~qAe~~L~~-~~~Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~~~~yeDLDEi 117 (220)
T PF14633_consen 39 PLFKNFNYKQAEEYLAD-QDVGEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIGGEEYEDLDEI 117 (220)
T ss_dssp TTEESS-HHHHHHHHCC-S-TT-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEETTEEESSHHHH
T ss_pred CCccCCCHHHHHHHHhc-CCCCCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEECCeEECCHHHH
Confidence 46778888899999974 467999999998777778999986554 5599888732 223332 47999999999
Q ss_pred HHhcc
Q psy8517 313 IEHYK 317 (614)
Q Consensus 313 V~~y~ 317 (614)
|.-|.
T Consensus 118 i~r~V 122 (220)
T PF14633_consen 118 IARHV 122 (220)
T ss_dssp HHHCH
T ss_pred HHHHH
Confidence 98764
No 62
>PRK12361 hypothetical protein; Provisional
Probab=96.51 E-value=0.0014 Score=74.02 Aligned_cols=68 Identities=18% Similarity=0.238 Sum_probs=50.1
Q ss_pred ehHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCC
Q psy8517 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYP 174 (614)
Q Consensus 95 ~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~ 174 (614)
+++.+.+....+++|+|||.+|.|||+++++...+... . ..++.++++.+|+
T Consensus 164 a~~~i~~~~~~~~~VlVHC~~G~sRSa~vv~ayLm~~~---~-------------------------~~~~~eA~~~vr~ 215 (547)
T PRK12361 164 AINWIHRQVRANKSVVVHCALGRGRSVLVLAAYLLCKD---P-------------------------DLTVEEVLQQIKQ 215 (547)
T ss_pred HHHHHHHHHHCCCeEEEECCCCCCcHHHHHHHHHHHhc---c-------------------------CCCHHHHHHHHHH
Confidence 44555555667899999999999999999877654322 1 2456667778889
Q ss_pred CccCCccChHHHHHHH
Q psy8517 175 NVSGMVQTEAQYKFVY 190 (614)
Q Consensus 175 ~R~~~Vqt~~Qy~f~y 190 (614)
.|+..+.+..|...+-
T Consensus 216 ~Rp~v~~n~~q~~~l~ 231 (547)
T PRK12361 216 IRKTARLNKRQLRALE 231 (547)
T ss_pred HCCCCCCCHHHHHHHH
Confidence 9999999988876443
No 63
>KOG2836|consensus
Probab=96.15 E-value=0.00067 Score=59.80 Aligned_cols=53 Identities=23% Similarity=0.404 Sum_probs=37.6
Q ss_pred CCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccCCCccCCccChHH
Q psy8517 106 HGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQ 185 (614)
Q Consensus 106 ~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R~~R~~~Vqt~~Q 185 (614)
+.-|.|||-||+||..+++|+..+ +.| +.-.++|+-+|++|.|++++ .|
T Consensus 97 ~~cvavhcvaglgrapvlvalali-----e~g-------------------------mkyedave~ir~krrga~n~-kq 145 (173)
T KOG2836|consen 97 GCCVAVHCVAGLGRAPVLVALALI-----EAG-------------------------MKYEDAVEMIRQKRRGAINS-KQ 145 (173)
T ss_pred CCeEEEEeecccCcchHHHHHHHH-----Hcc-------------------------ccHHHHHHHHHHHhhccccH-HH
Confidence 446999999999999988776433 223 22345677789999999886 46
Q ss_pred HHHH
Q psy8517 186 YKFV 189 (614)
Q Consensus 186 y~f~ 189 (614)
..|+
T Consensus 146 l~~l 149 (173)
T KOG2836|consen 146 LLYL 149 (173)
T ss_pred HHHH
Confidence 5554
No 64
>KOG1718|consensus
Probab=95.67 E-value=0.0036 Score=57.63 Aligned_cols=35 Identities=31% Similarity=0.607 Sum_probs=28.6
Q ss_pred ehHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHH
Q psy8517 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMI 129 (614)
Q Consensus 95 ~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~ 129 (614)
+.|.+.....++|.++|||-|||+||+++|.+..+
T Consensus 83 vAD~I~~v~~~gG~TLvHC~AGVSRSAsLClAYLm 117 (198)
T KOG1718|consen 83 VADKIHSVIMRGGKTLVHCVAGVSRSASLCLAYLM 117 (198)
T ss_pred HHHHHHHHHhcCCcEEEEEccccchhHHHHHHHHH
Confidence 44555556678999999999999999999887654
No 65
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=95.43 E-value=0.0056 Score=57.01 Aligned_cols=32 Identities=28% Similarity=0.671 Sum_probs=23.4
Q ss_pred ehHHHHHhhhcCCCEEEeccCCcCCcceeeeH
Q psy8517 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126 (614)
Q Consensus 95 ~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~i 126 (614)
.++.+...+..++.|+|||..|+||||++.|.
T Consensus 122 i~~eL~~~L~~g~~V~vHC~GGlGRtGlvAAc 153 (168)
T PF05706_consen 122 ILEELAARLENGRKVLVHCRGGLGRTGLVAAC 153 (168)
T ss_dssp HHHHHHHHHHTT--EEEE-SSSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHH
Confidence 44566667788999999999999999988643
No 66
>KOG1719|consensus
Probab=94.41 E-value=0.037 Score=50.39 Aligned_cols=72 Identities=15% Similarity=0.221 Sum_probs=52.3
Q ss_pred EehHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHHHHHhcCCCccchHHHHHHHHHHhcCCCCCCCCcccceeeccC
Q psy8517 94 IVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPY 173 (614)
Q Consensus 94 ~~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~R 173 (614)
.+++.+......++-+-|||-||-|||.|.++.+.+.. . .-.+..++..+|
T Consensus 97 ~aVeFi~k~asLGktvYVHCKAGRtRSaTvV~cYLmq~----~-------------------------~wtpe~A~~~vr 147 (183)
T KOG1719|consen 97 KAVEFIHKNASLGKTVYVHCKAGRTRSATVVACYLMQH----K-------------------------NWTPEAAVEHVR 147 (183)
T ss_pred HHHHHHHhccccCCeEEEEecCCCccchhhhhhhhhhh----c-------------------------CCCHHHHHHHHH
Confidence 45666777777888999999999999999877654331 1 234556677778
Q ss_pred CCccCCccChHHHHHHHHHHHHHHH
Q psy8517 174 PNVSGMVQTEAQYKFVYLAVQHYIQ 198 (614)
Q Consensus 174 ~~R~~~Vqt~~Qy~f~y~~v~~~i~ 198 (614)
..|+...--+.|.. ++.+|-.
T Consensus 148 ~iRp~VlL~~~Qw~----~l~ef~~ 168 (183)
T KOG1719|consen 148 KIRPRVLLRPAQWD----VLKEFYK 168 (183)
T ss_pred hcCcceeecHHHHH----HHHHHHH
Confidence 88888888888875 5555543
No 67
>KOG4566|consensus
Probab=93.66 E-value=0.089 Score=52.77 Aligned_cols=78 Identities=28% Similarity=0.460 Sum_probs=61.8
Q ss_pred hhcccCCch-HHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCeEEEEEEeecCCeeecCC-------CccccCHHHH
Q psy8517 241 QFYMENQGK-EAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGG-------GEQFDSLTQL 312 (614)
Q Consensus 241 ~~y~~~~~~-eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~v~h~~I~~~~~~~~~~~-------~~~F~sl~eL 312 (614)
.||.+...+ +|+..|. ..+.|+||+|+|...+--+.|+++...+.+..+|...++.+.... -..|++...+
T Consensus 53 g~~w~~~~~~~~~~~l~-~~p~~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~~sfr~ds~~~~~~pl~~~e~~~~~ 131 (258)
T KOG4566|consen 53 GHYWGLETANEAELCLG-QEPRGTFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQDSSFRLDSSHRHTPPLISFEDVEVL 131 (258)
T ss_pred CcccccccchhHHHhhc-CCCccceeeecCcCccccceeEeeeccCCCCccccccccceecccccccCCCcccChhHHHH
Confidence 457776655 6655554 449999999999999888999999999999999999777666532 2589999999
Q ss_pred HHhcccC
Q psy8517 313 IEHYKRN 319 (614)
Q Consensus 313 V~~y~~~ 319 (614)
++||...
T Consensus 132 ~~~y~~~ 138 (258)
T KOG4566|consen 132 IHHYRQS 138 (258)
T ss_pred HHhhhhh
Confidence 9999543
No 68
>KOG1716|consensus
Probab=92.97 E-value=0.037 Score=57.16 Aligned_cols=38 Identities=32% Similarity=0.606 Sum_probs=29.9
Q ss_pred ehHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHHH
Q psy8517 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQ 132 (614)
Q Consensus 95 ~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~~ 132 (614)
+++.+......++-|+|||.+|++||.+++..+++...
T Consensus 144 ~~~fI~~a~~~~~~vlVHC~~GvSRSat~viAYlM~~~ 181 (285)
T KOG1716|consen 144 AISFIEKAREKGGKVLVHCQAGVSRSATLVIAYLMKYE 181 (285)
T ss_pred HHHHHHHHHhCCCeEEEEcCCccchhHHHHHHHHHHHc
Confidence 44555556677899999999999999999877766544
No 69
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=92.69 E-value=0.06 Score=50.68 Aligned_cols=25 Identities=44% Similarity=0.818 Sum_probs=18.3
Q ss_pred CCCEEEeccCCcCCcceeeeHHHHH
Q psy8517 106 HGPVVVHCSAGIGRTGTFIVIDMIL 130 (614)
Q Consensus 106 ~~pv~VHCs~GvgRsg~f~~id~~~ 130 (614)
.+|+++||++|.-|||..+++-..+
T Consensus 124 ~~p~l~HC~aGKDRTG~~~alll~~ 148 (164)
T PF13350_consen 124 PGPVLFHCTAGKDRTGVVAALLLSL 148 (164)
T ss_dssp T--EEEE-SSSSSHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCccHHHHHHHHHHH
Confidence 3799999999999999988775443
No 70
>KOG1717|consensus
Probab=92.15 E-value=0.051 Score=53.79 Aligned_cols=57 Identities=30% Similarity=0.390 Sum_probs=37.8
Q ss_pred ccCCCCeEEeCCCCCCcccEE-EehHHHHHhhhcCCCEEEeccCCcCCcceeeeHHHHHH
Q psy8517 73 SISAGPVVVHCSAGIGRTGTF-IVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILD 131 (614)
Q Consensus 73 ~yt~WP~~~~~s~~v~~~~~f-~~ld~~~~~~~~~~pv~VHCs~GvgRsg~f~~id~~~~ 131 (614)
.|.--|+..|-+.... .+| .++..+-+.+.+..-++|||-+||.||-|.|+.+.+-.
T Consensus 219 ~YkqipisDh~Sqnls--~ffpEAIsfIdeArsk~cgvLVHClaGISRSvTvtvaYLMqk 276 (343)
T KOG1717|consen 219 IYKQIPISDHASQNLS--QFFPEAISFIDEARSKNCGVLVHCLAGISRSVTVTVAYLMQK 276 (343)
T ss_pred eEEeeeccchhhhhhh--hhhHHHHHHHHHhhccCCcEEEeeeccccchhHHHHHHHHHH
Confidence 3555565544444332 222 45666666666777899999999999999987765543
No 71
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=92.03 E-value=0.054 Score=51.03 Aligned_cols=29 Identities=31% Similarity=0.516 Sum_probs=22.0
Q ss_pred hcCCCEEEeccCCcCCcceeeeHHHHHHH
Q psy8517 104 KKHGPVVVHCSAGIGRTGTFIVIDMILDQ 132 (614)
Q Consensus 104 ~~~~pv~VHCs~GvgRsg~f~~id~~~~~ 132 (614)
+...||+|||..|..|||+.+++-..++.
T Consensus 89 ~~n~PvLiHC~~G~~rTG~vvg~lRk~Q~ 117 (164)
T PF03162_consen 89 PRNYPVLIHCNHGKDRTGLVVGCLRKLQG 117 (164)
T ss_dssp GGG-SEEEE-SSSSSHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCcchhhHHHHHHHHcC
Confidence 35679999999999999999887665443
No 72
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=90.89 E-value=0.48 Score=46.63 Aligned_cols=90 Identities=23% Similarity=0.473 Sum_probs=61.8
Q ss_pred CCCcccCChhhhhhhcc-----------------cCCchHHHHHHHcc----CCCCcEEEeecCCCCCCeEEEEEeCCeE
Q psy8517 228 YGGEKFATLSELVQFYM-----------------ENQGKEAEQLILQK----GKNGSFLVRESQSKPGDFVLSVRTDDKV 286 (614)
Q Consensus 228 ~~~~~~~~~~e~~~~y~-----------------~~~~~eae~lL~~~----~~~G~FLvR~S~s~~g~~~LSv~~~~~v 286 (614)
.+++.|.+|+|+..=|- .-...++|++|... ..--.|-+..|...||.|.|+.......
T Consensus 106 i~~~~yeDLDEii~r~V~pm~~~v~~~~~h~kf~~g~~~e~e~~L~~~k~~nP~~i~Y~f~~~~~~PG~F~L~y~~~~~~ 185 (220)
T PF14633_consen 106 IGGEEYEDLDEIIARHVEPMARNVEEMMNHRKFKDGTKEEVEEWLKEEKKANPKRIPYAFCISKEHPGYFILSYKPNKNP 185 (220)
T ss_dssp ETTEEESSHHHHHHHCHHHHHHHHHHHHCSTTEESS-CCCCHHHHHCHHHHSTTS-EEEEEE-TTSTTEEEEEEESSTTS
T ss_pred ECCeEECCHHHHHHHHHHHHHHHHHHHHhCccccCCCHHHHHHHHHHHHHhCCCCceEEEEECCCCCCEEEEEEEcCCCC
Confidence 36889999999884433 33344667777632 2334677788889999999999887666
Q ss_pred EEEE--EeecCCeeecCCCccccCHHHHHHhccc
Q psy8517 287 THVM--IRCQAEKYDVGGGEQFDSLTQLIEHYKR 318 (614)
Q Consensus 287 ~h~~--I~~~~~~~~~~~~~~F~sl~eLV~~y~~ 318 (614)
+|.. |.-.-++|.+ .+..|.++.+|+.+++.
T Consensus 186 ~~~~~~v~V~p~Gf~~-r~~~f~~~~~L~~~FK~ 218 (220)
T PF14633_consen 186 RHEYWPVKVTPDGFRF-RKQVFPSLDRLINWFKK 218 (220)
T ss_dssp -EEEEEEEE-SSSEEE-TTEEESSHHHHHHHHHH
T ss_pred ceEEeeEEEecCcEEE-ecccCCCHHHHHHHHhh
Confidence 6555 6654455555 46999999999998864
No 73
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=90.87 E-value=0.057 Score=50.06 Aligned_cols=29 Identities=38% Similarity=0.627 Sum_probs=21.4
Q ss_pred hhhcCCCEEEeccCCcCCcceeeeHHHHH
Q psy8517 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMIL 130 (614)
Q Consensus 102 ~~~~~~pv~VHCs~GvgRsg~f~~id~~~ 130 (614)
.+.+..++++||.+|.|||.+|.++..++
T Consensus 120 ~~p~~~~l~fhC~~G~GRTTt~Mv~~~li 148 (149)
T PF14566_consen 120 SLPKDTWLHFHCQAGRGRTTTFMVMYDLI 148 (149)
T ss_dssp TS-TT-EEEEE-SSSSHHHHHHHHHHHHH
T ss_pred hCCCCCeEEEECCCCCCHHHHHHHHHHHh
Confidence 44556789999999999999998876554
No 74
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=90.86 E-value=0.15 Score=46.42 Aligned_cols=22 Identities=27% Similarity=0.585 Sum_probs=18.7
Q ss_pred cCCCEEEeccCCcCCcceeeeHH
Q psy8517 105 KHGPVVVHCSAGIGRTGTFIVID 127 (614)
Q Consensus 105 ~~~pv~VHCs~GvgRsg~f~~id 127 (614)
..+||++||.+|. |||++.++.
T Consensus 85 ~~~pvL~HC~sG~-Rt~~l~al~ 106 (135)
T TIGR01244 85 AEGPVLAYCRSGT-RSSLLWGFR 106 (135)
T ss_pred CCCCEEEEcCCCh-HHHHHHHHH
Confidence 4689999999999 999886653
No 75
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=88.91 E-value=0.24 Score=45.19 Aligned_cols=22 Identities=32% Similarity=0.744 Sum_probs=18.3
Q ss_pred hhhcCCCEEEeccCCcCCccee
Q psy8517 102 QIKKHGPVVVHCSAGIGRTGTF 123 (614)
Q Consensus 102 ~~~~~~pv~VHCs~GvgRsg~f 123 (614)
......|++|||.+|+|||-..
T Consensus 89 ~wp~~apllIHC~aGISRStA~ 110 (172)
T COG5350 89 EWPRFAPLLIHCYAGISRSTAA 110 (172)
T ss_pred cCccccceeeeeccccccchHH
Confidence 4467789999999999998644
No 76
>KOG2283|consensus
Probab=84.95 E-value=0.43 Score=51.84 Aligned_cols=32 Identities=44% Similarity=0.681 Sum_probs=25.7
Q ss_pred cCCCEEEeccCCcCCcceeeeHHHHHHHHHhc
Q psy8517 105 KHGPVVVHCSAGIGRTGTFIVIDMILDQIKKH 136 (614)
Q Consensus 105 ~~~pv~VHCs~GvgRsg~f~~id~~~~~~~~~ 136 (614)
...-++|||-+|.||||+.++...+...+..+
T Consensus 106 ~~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~t 137 (434)
T KOG2283|consen 106 PKNVVVVHCKAGKGRTGVMICAYLIYSGISAT 137 (434)
T ss_pred ccceEEEEccCCCcceEEEEeHHHHhhhhcCC
Confidence 34568999999999999998888777766543
No 77
>KOG1856|consensus
Probab=84.62 E-value=1.2 Score=52.75 Aligned_cols=76 Identities=21% Similarity=0.486 Sum_probs=58.3
Q ss_pred hhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEeCCe-EEEEEEeec--CCeeecC-----CCccccCHHHH
Q psy8517 241 QFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDK-VTHVMIRCQ--AEKYDVG-----GGEQFDSLTQL 312 (614)
Q Consensus 241 ~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~~~~-v~h~~I~~~--~~~~~~~-----~~~~F~sl~eL 312 (614)
..|+.++.++||+.|. ...-|.++||+|+..-...++.++-.++ -.|+-|+.. .+.|.++ |+..|..|.|+
T Consensus 1109 P~F~n~n~eQAe~yL~-~~d~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e~feDLDEi 1187 (1299)
T KOG1856|consen 1109 PLFKNLNAEQAEAYLS-DMDQGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGEEFEDLDEI 1187 (1299)
T ss_pred ccccCCCHHHHHHHHH-hcccccEEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccceEEECCcccccHHHH
Confidence 5788899999999997 4478999999998766668888876554 456777763 3344444 47999999999
Q ss_pred HHhcc
Q psy8517 313 IEHYK 317 (614)
Q Consensus 313 V~~y~ 317 (614)
|.-|.
T Consensus 1188 I~r~v 1192 (1299)
T KOG1856|consen 1188 IARYV 1192 (1299)
T ss_pred HHHHH
Confidence 87664
No 78
>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Probab=83.72 E-value=0.67 Score=46.84 Aligned_cols=28 Identities=39% Similarity=0.636 Sum_probs=23.7
Q ss_pred CCCEEEeccCCcCCcceeeeHHHHHHHH
Q psy8517 106 HGPVVVHCSAGIGRTGTFIVIDMILDQI 133 (614)
Q Consensus 106 ~~pv~VHCs~GvgRsg~f~~id~~~~~~ 133 (614)
.+|+++||.+|.-|||...|+...+...
T Consensus 136 ~~PvL~HC~~GkdRTGl~~al~r~~~~~ 163 (249)
T COG2365 136 NGPVLIHCTAGKDRTGLVAALYRKLVGG 163 (249)
T ss_pred cCCEEEecCCCCcchHHHHHHHHHHhCC
Confidence 3999999999999999998887666443
No 79
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=83.49 E-value=0.77 Score=43.35 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=31.1
Q ss_pred ceEEEecCCCCCchhhhhcceeccccceEEeecc
Q psy8517 432 KSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTK 465 (614)
Q Consensus 432 ~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~ 465 (614)
.+||++-+|+++++++|-...-++++..||.++.
T Consensus 16 ~r~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~ 49 (166)
T PTZ00242 16 FKFLILDAPSPSNLPLYIKELQRYNVTHLVRVCG 49 (166)
T ss_pred eEEEEecCCCcccHHHHHHHHHhCCCeEEEecCC
Confidence 4799999999999999999999999999998863
No 80
>KOG1856|consensus
Probab=83.47 E-value=2.7 Score=49.89 Aligned_cols=90 Identities=29% Similarity=0.598 Sum_probs=67.2
Q ss_pred CCcccCChhhhh-----------------hhcccCCchHHHHHHHccC-CCC---cEEEeecCCCCCCeEEEEEeCCeEE
Q psy8517 229 GGEKFATLSELV-----------------QFYMENQGKEAEQLILQKG-KNG---SFLVRESQSKPGDFVLSVRTDDKVT 287 (614)
Q Consensus 229 ~~~~~~~~~e~~-----------------~~y~~~~~~eae~lL~~~~-~~G---~FLvR~S~s~~g~~~LSv~~~~~v~ 287 (614)
+|+.|..|.|.. .||.+-.+.+-|++|.... .++ .|-...|...||.|.||.+.+.+++
T Consensus 1177 ~~e~feDLDEiI~r~vqpm~~~~~em~nhkyf~~Gt~~~~ek~L~~~k~~np~~~~Y~F~~s~~~PG~F~L~y~~~~k~~ 1256 (1299)
T KOG1856|consen 1177 GGEEFEDLDEIIARYVQPMATNLREMTNHKYFFTGTKKEVEKLLRDYKKVNPKKSVYFFCASHEHPGKFCLSYKPSSKPR 1256 (1299)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHhhhHhhcCCHHHHHHHHHHHhccCCCeeeEEEEecccCCceEEEEeccCCCcc
Confidence 889999999987 3333222446788887433 344 4556899999999999999999999
Q ss_pred EEEEeecCCeeecCCCccccCHHHHHHhcccC
Q psy8517 288 HVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRN 319 (614)
Q Consensus 288 h~~I~~~~~~~~~~~~~~F~sl~eLV~~y~~~ 319 (614)
|=-+.-...+|.+ .+..|.|+.+|+.+++.+
T Consensus 1257 heyv~v~p~g~~~-rg~~f~tld~L~~~FK~h 1287 (1299)
T KOG1856|consen 1257 HEYVKVVPEGFRF-RGQNFGTLDELCRWFKRH 1287 (1299)
T ss_pred ceeEEEcccceEE-ecccchhHHHHHHHHHHH
Confidence 9877664444444 458999999999988765
No 81
>KOG4471|consensus
Probab=78.99 E-value=1.2 Score=49.17 Aligned_cols=29 Identities=34% Similarity=0.628 Sum_probs=23.4
Q ss_pred hhhcCCCEEEeccCCcCCcceeeeHHHHH
Q psy8517 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMIL 130 (614)
Q Consensus 102 ~~~~~~pv~VHCs~GvgRsg~f~~id~~~ 130 (614)
...+..||+||||+|=-||..+.++..++
T Consensus 370 Ve~~~~sVlVHCSDGWDRT~QlvsLA~Ll 398 (717)
T KOG4471|consen 370 VESESRSVLVHCSDGWDRTAQLVSLAMLL 398 (717)
T ss_pred HhcCCceEEEEcCCCccchHHHHHHHHHH
Confidence 34567899999999999999987776543
No 82
>PLN02727 NAD kinase
Probab=70.62 E-value=2.9 Score=49.13 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=22.5
Q ss_pred cCCCEEEeccCCcCCcceeeeHHHH
Q psy8517 105 KHGPVVVHCSAGIGRTGTFIVIDMI 129 (614)
Q Consensus 105 ~~~pv~VHCs~GvgRsg~f~~id~~ 129 (614)
..+||++||..|.+|+|++.|....
T Consensus 340 lpkPVLvHCKSGarRAGamvA~yl~ 364 (986)
T PLN02727 340 SKKPIYLHSKEGVWRTSAMVSRWKQ 364 (986)
T ss_pred cCCCEEEECCCCCchHHHHHHHHHH
Confidence 4799999999999999999887765
No 83
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=64.64 E-value=22 Score=28.63 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=29.7
Q ss_pred HHHHHHHccC-CCCcEEEeecCCCCCCeEEEEEeCCe
Q psy8517 250 EAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDK 285 (614)
Q Consensus 250 eae~lL~~~~-~~G~FLvR~S~s~~g~~~LSv~~~~~ 285 (614)
|..+.|.... ++|+|+.|-|.++.|++++-....++
T Consensus 13 evk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~~dg 49 (86)
T PF02762_consen 13 EVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVTQDG 49 (86)
T ss_dssp HHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEETTS
T ss_pred HHHHHHHHHhCCcccEEEeeccccccceeEEEEcCCC
Confidence 6667776554 99999999999999999998877654
No 84
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=63.14 E-value=2.7 Score=36.80 Aligned_cols=22 Identities=27% Similarity=0.638 Sum_probs=15.9
Q ss_pred cCCCEEEeccCCcCCcceeeeHH
Q psy8517 105 KHGPVVVHCSAGIGRTGTFIVID 127 (614)
Q Consensus 105 ~~~pv~VHCs~GvgRsg~f~~id 127 (614)
..+||++||..|- |++++.++-
T Consensus 85 ~~~Pvl~hC~sG~-Ra~~l~~l~ 106 (110)
T PF04273_consen 85 LPKPVLAHCRSGT-RASALWALA 106 (110)
T ss_dssp TTTSEEEE-SCSH-HHHHHHHHH
T ss_pred CCCCEEEECCCCh-hHHHHHHHH
Confidence 4689999999988 777665543
No 85
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=56.19 E-value=6.2 Score=39.34 Aligned_cols=35 Identities=11% Similarity=-0.003 Sum_probs=31.5
Q ss_pred CceEEEecCCCCCchhhhhcceeccccceEEeecc
Q psy8517 431 GKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTK 465 (614)
Q Consensus 431 ~~~yIatQ~Pl~~T~~dFW~mvwe~~~~~IVmLt~ 465 (614)
.-+||++-+|+..++.+|..-....++..||-+|.
T Consensus 91 ~~rfLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE 125 (241)
T PTZ00393 91 KIKILILDAPTNDLLPLYIKEMKNYNVTDLVRTCE 125 (241)
T ss_pred ceeEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45899999999999999999999999999998864
No 86
>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.
Probab=45.27 E-value=10 Score=40.32 Aligned_cols=26 Identities=31% Similarity=0.579 Sum_probs=19.7
Q ss_pred hcCCCEEEeccCCcCCcceeeeHHHH
Q psy8517 104 KKHGPVVVHCSAGIGRTGTFIVIDMI 129 (614)
Q Consensus 104 ~~~~pv~VHCs~GvgRsg~f~~id~~ 129 (614)
..+.+|+|||++|--||..++++-.+
T Consensus 229 ~~~~~Vlvh~~dGwDrt~q~~sL~ql 254 (353)
T PF06602_consen 229 DEGSSVLVHCSDGWDRTSQLSSLAQL 254 (353)
T ss_dssp TT--EEEEECTTSSSHHHHHHHHHHH
T ss_pred ccCceEEEEcCCCCcccHHHHHHHHH
Confidence 56779999999999999887765543
No 87
>KOG1572|consensus
Probab=43.51 E-value=12 Score=36.92 Aligned_cols=29 Identities=31% Similarity=0.582 Sum_probs=22.5
Q ss_pred hcCCCEEEeccCCcCCcceeeeHHHHHHH
Q psy8517 104 KKHGPVVVHCSAGIGRTGTFIVIDMILDQ 132 (614)
Q Consensus 104 ~~~~pv~VHCs~GvgRsg~f~~id~~~~~ 132 (614)
+..-|+++||..|--|||+.+..-.-++.
T Consensus 146 ~~N~P~Lihc~rGkhRtg~lVgclRklq~ 174 (249)
T KOG1572|consen 146 KRNYPILIHCKRGKHRTGCLVGCLRKLQN 174 (249)
T ss_pred ccCCceEEecCCCCcchhhhHHHHHHHhc
Confidence 45679999999999999988765444433
No 88
>PF02061 Lambda_CIII: Lambda Phage CIII; InterPro: IPR013056 Bacteriophage lambda regulatory protein CIII is a small protein that plays a role in stabilising the CII transcriptional activator, via a mechanism that is not yet fully understood [, ]. Stabilised CII activates CI, the gene for the repressor protein that prevents transcription of proteins required for lytic development. The central portion of the protein is well conserved and is both necessary and sufficient for the activity of the protein []. Comparative analysis of the CIII sequence in lambda, Bacteriophage HK022 and the lambdoid Enterobacteria phage P22 has led to the suggestion that this central region assumes an amphipathic alpha-helical structure []. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=39.18 E-value=32 Score=24.07 Aligned_cols=26 Identities=23% Similarity=0.586 Sum_probs=21.6
Q ss_pred EEEeecccCCCCCCCChhHHHHHHHH
Q psy8517 578 YHYHFQAWPDHGVPSDPGCVLNFLYE 603 (614)
Q Consensus 578 ~h~~~~~WPDhGvP~~p~~~l~f~~~ 603 (614)
.+|++..||--|+|+=..++|+-|..
T Consensus 1 m~~~~AG~~~~G~~ql~ESLLdrItR 26 (45)
T PF02061_consen 1 MQYAIAGWPRMGCPQLSESLLDRITR 26 (45)
T ss_pred CeeeecCccccCCchhhHHHHHHHHH
Confidence 37899999999999877888876653
No 89
>KOG1089|consensus
Probab=36.30 E-value=21 Score=39.94 Aligned_cols=25 Identities=32% Similarity=0.539 Sum_probs=20.4
Q ss_pred cCCCEEEeccCCcCCcceeeeHHHH
Q psy8517 105 KHGPVVVHCSAGIGRTGTFIVIDMI 129 (614)
Q Consensus 105 ~~~pv~VHCs~GvgRsg~f~~id~~ 129 (614)
++-+|+||||+|--||...|++-.+
T Consensus 343 ~~~sVlvhcsdGwDrT~qV~SLaQl 367 (573)
T KOG1089|consen 343 EGASVLVHCSDGWDRTCQVSSLAQL 367 (573)
T ss_pred CCCeEEEEccCCcchhHHHHHHHHH
Confidence 4579999999999999877776543
No 90
>KOG3508|consensus
Probab=34.81 E-value=16 Score=43.13 Aligned_cols=59 Identities=20% Similarity=0.160 Sum_probs=44.1
Q ss_pred ChhhhhhhcccCCchHHHHHHHccCCCCcEEEeecCCCCCCeEEEEEe-CCeEEEEEEee
Q psy8517 235 TLSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRT-DDKVTHVMIRC 293 (614)
Q Consensus 235 ~~~e~~~~y~~~~~~eae~lL~~~~~~G~FLvR~S~s~~g~~~LSv~~-~~~v~h~~I~~ 293 (614)
.+.+..||++..-+.-||..+....+.|.++||++...||.+.|+... -+.+.|.++..
T Consensus 77 ~~p~~~~~~~~lrr~i~e~r~r~~e~s~~~wi~e~~~lp~~~~l~~~~~~d~~l~~r~~s 136 (932)
T KOG3508|consen 77 APPERKWYMENLRRTIAESRLRRAENSGSYWIREAKRLPGKGKLSCLLQLDGTLYARTIS 136 (932)
T ss_pred CcchhhhhhcchhhhcccchhhccCCceeEEeeccCcCCCcceeehhhccchhHHhhhhh
Confidence 334444555444444888888777799999999999999999999853 34488888775
No 91
>smart00557 IG_FLMN Filamin-type immunoglobulin domains. These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).
Probab=30.10 E-value=61 Score=27.00 Aligned_cols=28 Identities=21% Similarity=0.608 Sum_probs=24.6
Q ss_pred cCCCCcEEEeecCCCCCCeEEEEEeCCe
Q psy8517 258 KGKNGSFLVRESQSKPGDFVLSVRTDDK 285 (614)
Q Consensus 258 ~~~~G~FLvR~S~s~~g~~~LSv~~~~~ 285 (614)
...+|+|.++-....+|.|.|+++.++.
T Consensus 52 d~~dGty~v~y~P~~~G~~~i~V~~~g~ 79 (93)
T smart00557 52 DNGDGTYTVSYTPTEPGDYTVTVKFGGE 79 (93)
T ss_pred eCCCCEEEEEEEeCCCEeEEEEEEECCE
Confidence 3488999999999999999999999873
No 92
>PF00630 Filamin: Filamin/ABP280 repeat; InterPro: IPR017868 The many different actin cross-linking proteins share a common architecture, consisting of a globular actin-binding domain and an extended rod. Whereas their actin-binding domains consist of two calponin homology domains (see IPR001715 from INTERPRO), their rods fall into three families. The rod domain of the family including the Dictyostelium discoideum (Slime mould) gelation factor (ABP120) and human filamin (ABP280) is constructed from tandem repeats of a 100-residue motif that is glycine and proline rich []. The gelation factor's rod contains 6 copies of the repeat, whereas filamin has a rod constructed from 24 repeats. The resolution of the 3D structure of rod repeats from the gelation factor has shown that they consist of a beta-sandwich, formed by two beta-sheets arranged in an immunoglobulin-like fold [, ]. Because conserved residues that form the core of the repeats are preserved in filamin, the repeat structure should be common to the members of the gelation factor/filamin family. The head to tail homodimerisation is crucial to the function of the ABP120 and ABP280 proteins. This interaction involves a small portion at the distal end of the rod domains. For the gelation factor it has been shown that the carboxy-terminal repeat 6 dimerises through a double edge-to-edge extension of the beta-sheet and that repeat 5 contributes to dimerisation to some extent [, , ].; PDB: 2DI9_A 2EEC_A 2DIC_A 2EEA_A 2DMC_A 2EE9_A 2D7O_A 2D7N_A 2K7P_A 2NQC_A ....
Probab=28.80 E-value=50 Score=27.61 Aligned_cols=26 Identities=23% Similarity=0.640 Sum_probs=23.8
Q ss_pred CCCcEEEeecCCCCCCeEEEEEeCCe
Q psy8517 260 KNGSFLVRESQSKPGDFVLSVRTDDK 285 (614)
Q Consensus 260 ~~G~FLvR~S~s~~g~~~LSv~~~~~ 285 (614)
.+|+|.+.-....+|.|.|+++.++.
T Consensus 68 ~~G~y~v~y~p~~~G~y~i~V~~~g~ 93 (101)
T PF00630_consen 68 GDGTYTVSYTPTEPGKYKISVKINGQ 93 (101)
T ss_dssp SSSEEEEEEEESSSEEEEEEEEESSE
T ss_pred CCCEEEEEEEeCccEeEEEEEEECCE
Confidence 89999999999999999999999874
No 93
>KOG1785|consensus
Probab=28.61 E-value=1e+02 Score=32.81 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=29.8
Q ss_pred HHHHHHHccC-CCCcEEEeecCCCCCCeEEEEEeCCe
Q psy8517 250 EAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDK 285 (614)
Q Consensus 250 eae~lL~~~~-~~G~FLvR~S~s~~g~~~LSv~~~~~ 285 (614)
|..+.|.... ++|+|+.|.|.++.|++++-....++
T Consensus 267 EVk~RLqk~~~KpGSYIFRlSCTRlGQWAIGYVt~dG 303 (563)
T KOG1785|consen 267 EVKARLQKYIKKPGSYIFRLSCTRLGQWAIGYVTADG 303 (563)
T ss_pred HHHHHHHHHhcCCCceEEeeccCcccceeEEEEcCCC
Confidence 5566676555 99999999999999999999887654
No 94
>COG3723 RecT Recombinational DNA repair protein (RecE pathway) [DNA replication, recombination, and repair]
Probab=27.87 E-value=31 Score=34.30 Aligned_cols=33 Identities=36% Similarity=0.487 Sum_probs=27.1
Q ss_pred ccceeeeeEEEEEE-eccce-------eeccCCCcccccch
Q psy8517 13 SSMRLIQGRIYMQV-TKEDI-------SLSFPGPWTKYFMP 45 (614)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~ 45 (614)
.+++|+.|+-++-+ |||+| |+++-|||++.|=+
T Consensus 156 A~~~L~ngf~kt~~wtkeqIe~h~kk~sks~nGpw~~~~d~ 196 (276)
T COG3723 156 ASFELKNGFTKTEYWTKEQIEAHKKKSSKSNNGPWRTHWDA 196 (276)
T ss_pred EEEEEccCceeEEEeeHHHHHHHHHHhhcccCCccccchHH
Confidence 47899999987764 88887 89999999998744
No 95
>PF02061 Lambda_CIII: Lambda Phage CIII; InterPro: IPR013056 Bacteriophage lambda regulatory protein CIII is a small protein that plays a role in stabilising the CII transcriptional activator, via a mechanism that is not yet fully understood [, ]. Stabilised CII activates CI, the gene for the repressor protein that prevents transcription of proteins required for lytic development. The central portion of the protein is well conserved and is both necessary and sufficient for the activity of the protein []. Comparative analysis of the CIII sequence in lambda, Bacteriophage HK022 and the lambdoid Enterobacteria phage P22 has led to the suggestion that this central region assumes an amphipathic alpha-helical structure []. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=25.00 E-value=93 Score=21.88 Aligned_cols=24 Identities=25% Similarity=0.632 Sum_probs=20.1
Q ss_pred EeeecCCCCCCCCCChHHHHHHHH
Q psy8517 522 HYHFQAWPDHGVPSDPGCVLNFLY 545 (614)
Q Consensus 522 ~~~~~~WPd~gvP~~~~~~l~~i~ 545 (614)
+|++.+||-.|+|.-.+++++-|.
T Consensus 2 ~~~~AG~~~~G~~ql~ESLLdrIt 25 (45)
T PF02061_consen 2 QYAIAGWPRMGCPQLSESLLDRIT 25 (45)
T ss_pred eeeecCccccCCchhhHHHHHHHH
Confidence 578899999999988888887664
Done!