RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy8517
(614 letters)
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 471 bits (1213), Expect = e-161
Identities = 225/399 (56%), Positives = 268/399 (67%), Gaps = 61/399 (15%)
Query: 210 SIQLGREYTNIRC----DCYDLYGGEKFATLSELVQFYMENQG----------------- 248
S++ T+I+ D YDLYGGEKFATL+ELVQ+YME+ G
Sbjct: 44 SVRRNGAVTHIKIQNTGDYYDLYGGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLN 103
Query: 249 ----------------KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDD-------- 284
KEAE+L+ +KGK+GSFLVRESQS PGDFVLSVRT D
Sbjct: 104 CADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDG 163
Query: 285 --KVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITV 342
KVTHVMIRCQ KYDVGGGE+FDSLT L+EHYK+NPMVET GTV+ LKQP N TRI
Sbjct: 164 KSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLNTTRINA 223
Query: 343 SNIHDRVTELQKE----NSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNIL 398
+ I RV EL K + K GFWEEFE+LQQQE + L++R+EGQ+ +N+NKNRYKNIL
Sbjct: 224 AEIESRVRELSKLAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNIL 283
Query: 399 PFDHTRVKLKDVDEDVPGAEYINANYIQSE--------DGGKSYIATQGCLPSTMNDFWS 450
PFDHTRV L D D + P ++YINAN I E KSYIATQGCL +T+NDFW
Sbjct: 284 PFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWR 343
Query: 451 MVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLV 510
MV+QEN RVIVMTTKE+ERGK+KC KYWPD++ K YG + V N+ ES DY LRE +
Sbjct: 344 MVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTLRELKL 403
Query: 511 SKGS--ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
SK + R ++ YHF+ WPDHGVPSDPG VL+FL EV
Sbjct: 404 SKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEV 442
Score = 126 bits (319), Expect = 3e-31
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 242 FYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG 301
F+ G EAE L+L +G +GSFL R S+S PGD LSVR + VTH+ I+ + YD+
Sbjct: 7 FHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDYYDLY 66
Query: 302 GGEQFDSLTQLIEHYKRNP--MVETSGTVVHLKQPFNATRITV-----SNIHDRVTE-LQ 353
GGE+F +L +L+++Y + + E +G V+ LK P N T ++ + E L
Sbjct: 67 GGEKFATLAELVQYYMEHHGQLKEKNGDVIELKYPLNCADPTSERWFHGHLSGKEAEKLL 126
Query: 354 KENSSKAGFWEEFESLQQQESRHLFTRREGQK 385
E F ES L R K
Sbjct: 127 TEKGKHGSFLVR-ESQSHPGDFVLSVRTGDDK 157
Score = 119 bits (301), Expect = 7e-29
Identities = 52/104 (50%), Positives = 66/104 (63%), Gaps = 29/104 (27%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
+ I GPVVVHCSAGIGRTGTFIVID+++D I++ G+DC+ID+ +TIQ
Sbjct: 447 ESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQM---------- 496
Query: 161 SSTSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTL 200
V SGMVQTEAQY+ +Y+AVQHYI+TL
Sbjct: 497 ---------------VRSQRSGMVQTEAQYRSIYMAVQHYIETL 525
Score = 54.1 bits (130), Expect = 9e-08
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Query: 92 TFIVIDMILDQIKKHGPVVVHCSAG---IGRTGTFIVIDMILDQIKKHGL 138
T D K V++ C +G F + +++ KK+ +
Sbjct: 153 TGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPM 202
Score = 51.0 bits (122), Expect = 7e-07
Identities = 7/36 (19%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 77 GPVVVHCSAG---IGRTGTFIVIDMILDQIKKHGPV 109
V++ C +G F + +++ KK+ V
Sbjct: 168 THVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMV 203
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 417 bits (1073), Expect = e-140
Identities = 188/395 (47%), Positives = 255/395 (64%), Gaps = 57/395 (14%)
Query: 210 SIQLGREYTNIRC----DCYDLYGGEKFATLSELVQFYMENQG----------------- 248
S+++G + T+IR D YDLYGGEKFATL+ELV++Y + QG
Sbjct: 42 SVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLN 101
Query: 249 ----------------KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDK------- 285
+AE L+ KG+ +FLVRES S+PGDFVLSV +D
Sbjct: 102 CSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSP 161
Query: 286 --VTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVS 343
VTH+ + C+ +Y VGG E FDSLT L+EH+K+ + E SG V+L+QP+ ATR+ +
Sbjct: 162 LRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAA 221
Query: 344 NIHDRVTELQKENSSKA----GFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 399
+I +RV EL K+ S+ GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNILP
Sbjct: 222 DIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILP 281
Query: 400 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-----KSYIATQGCLPSTMNDFWSMVWQ 454
FDH+RV L+ D ++PG++YINANYI+++ G K+YIA+QGCL +T+NDFW M WQ
Sbjct: 282 FDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQ 341
Query: 455 ENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--K 512
EN RVIVMTT+E+E+G+NKC YWP+ + YG V N E TT+Y LR VS
Sbjct: 342 ENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLD 401
Query: 513 GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ R+I+HY + +WPDHGVPS+PG VL+FL ++
Sbjct: 402 NGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQI 436
Score = 124 bits (314), Expect = 1e-30
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 242 FYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG 301
F+ + G +AE L+ +G +GSFL R S+ GDF LSVR D+VTH+ I+ + YD+
Sbjct: 5 FHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLY 64
Query: 302 GGEQFDSLTQLIEHYKRNP--MVETSGTVVHLKQPFNATRITV 342
GGE+F +LT+L+E+Y + + + GT++HLK P N + T
Sbjct: 65 GGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTS 107
Score = 119 bits (300), Expect = 1e-28
Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 29/114 (25%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
+ + GP++VHCSAGIGRTGT IVIDM+++ I GLDC+IDIQ+TIQ
Sbjct: 441 ESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQM---------- 490
Query: 161 SSTSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKS 210
V SGMVQTEAQYKF+Y+A+ +I+T ++L Q
Sbjct: 491 ---------------VRAQRSGMVQTEAQYKFIYVAIAQFIETTKKKLEVLQSQ 529
Score = 61.4 bits (149), Expect = 4e-10
Identities = 7/47 (14%), Positives = 14/47 (29%)
Query: 63 SPRDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
S + + + + V C G G D + D ++
Sbjct: 151 SDQPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKT 197
Score = 61.1 bits (148), Expect = 5e-10
Identities = 14/122 (11%), Positives = 29/122 (23%), Gaps = 5/122 (4%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTI--QHAWFKLKPSTNSSTS 164
+ V C G G D + D ++ + + +
Sbjct: 165 THIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIE 224
Query: 165 LFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGREYTNIRCDC 224
+ + +F L Q + + ++ R Y NI
Sbjct: 225 NRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNR-YKNIL--P 281
Query: 225 YD 226
+D
Sbjct: 282 FD 283
Score = 44.9 bits (106), Expect = 6e-05
Identities = 9/80 (11%), Positives = 18/80 (22%), Gaps = 9/80 (11%)
Query: 528 WPDHGVPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSK-GSESPRKIYHYHFQAWP 586
GV D ++ Y +D + + + W
Sbjct: 80 TQQQGVLQDRD-------GTIIHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPW- 131
Query: 587 DHGVPSDPGCVLNFLYEVNT 606
V +F+ V +
Sbjct: 132 TFLVRESLSQPGDFVLSVLS 151
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 412 bits (1060), Expect = e-137
Identities = 188/395 (47%), Positives = 255/395 (64%), Gaps = 57/395 (14%)
Query: 210 SIQLGREYTNIRC----DCYDLYGGEKFATLSELVQFYMENQG----------------- 248
S+++G + T+IR D YDLYGGEKFATL+ELV++Y + QG
Sbjct: 42 SVRVGDQVTHIRIQNSGDFYDLYGGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLN 101
Query: 249 ----------------KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDK------- 285
+AE L+ KG+ +FLVRES S+PGDFVLSV +D
Sbjct: 102 CSDPTSERWYHGHMSGGQAETLLQAKGEPWTFLVRESLSQPGDFVLSVLSDQPKAGPGSP 161
Query: 286 --VTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVS 343
VTH+ + C+ +Y VGG E FDSLT L+EH+K+ + E SG V+L+QP+ ATR+ +
Sbjct: 162 LRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAA 221
Query: 344 NIHDRVTELQKENSSKA----GFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 399
+I +RV EL K+ S+ GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNILP
Sbjct: 222 DIENRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILP 281
Query: 400 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-----KSYIATQGCLPSTMNDFWSMVWQ 454
FDH+RV L+ D ++PG++YINANYI+++ G K+YIA+QGCL +T+NDFW M WQ
Sbjct: 282 FDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQ 341
Query: 455 ENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--K 512
EN RVIVMTT+E+E+G+NKC YWP+ + YG V N E TT+Y LR VS
Sbjct: 342 ENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLD 401
Query: 513 GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ R+I+HY + +WPDHGVPS+PG VL+FL ++
Sbjct: 402 NGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQI 436
Score = 125 bits (315), Expect = 2e-30
Identities = 51/120 (42%), Positives = 70/120 (58%), Gaps = 21/120 (17%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
+ + GP++VH SAGIGRTGT IVIDM+++ I GLDC+IDIQ+TIQ ++
Sbjct: 441 ESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQM----VR---- 492
Query: 161 SSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGREYTNI 220
+ GMVQTEAQYKF+Y+A+ +I+T ++L Q EY NI
Sbjct: 493 --------AQRS-----GMVQTEAQYKFIYVAIAQFIETTKKKLEVLQSQKGQESEYGNI 539
Score = 124 bits (313), Expect = 3e-30
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 242 FYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG 301
F+ + G +AE L+ +G +GSFL R S+ GDF LSVR D+VTH+ I+ + YD+
Sbjct: 5 FHRDLSGLDAETLLKGRGVHGSFLARPSRKNQGDFSLSVRVGDQVTHIRIQNSGDFYDLY 64
Query: 302 GGEQFDSLTQLIEHYKRNP--MVETSGTVVHLKQPFNATRITV 342
GGE+F +LT+L+E+Y + + + GT++HLK P N + T
Sbjct: 65 GGEKFATLTELVEYYTQQQGVLQDRDGTIIHLKYPLNCSDPTS 107
Score = 62.3 bits (151), Expect = 3e-10
Identities = 6/45 (13%), Positives = 13/45 (28%)
Query: 65 RDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+ + + + V C G G D + D ++
Sbjct: 153 QPKAGPGSPLRVTHIKVMCEGGRYTVGGLETFDSLTDLVEHFKKT 197
Score = 62.3 bits (151), Expect = 3e-10
Identities = 14/122 (11%), Positives = 29/122 (23%), Gaps = 5/122 (4%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTI--QHAWFKLKPSTNSSTS 164
+ V C G G D + D ++ + + +
Sbjct: 165 THIKVMCEGGRYTVGGLETFDSLTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIE 224
Query: 165 LFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGREYTNIRCDC 224
+ + +F L Q + + ++ R Y NI
Sbjct: 225 NRVLELNKKQESEDTAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNR-YKNIL--P 281
Query: 225 YD 226
+D
Sbjct: 282 FD 283
Score = 44.5 bits (105), Expect = 1e-04
Identities = 6/59 (10%), Positives = 15/59 (25%), Gaps = 2/59 (3%)
Query: 549 VNNMYESVTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEVNT 606
++ Y +D + + + W V +F+ V +
Sbjct: 94 IHLKYPLNCSDPTSERWYHGHMSGGQAETLLQAKGEPW-TFLVRESLSQPGDFVLSVLS 151
Score = 29.5 bits (66), Expect = 3.3
Identities = 8/64 (12%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 345 IHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTR 404
I +L+ S+ G E+ ++ + + + +++K L + R
Sbjct: 516 IETTKKKLE-VLQSQKGQESEYGNITYPPAMKN-AHAKASRTSSKHKEDVYENLHTKNKR 573
Query: 405 VKLK 408
+
Sbjct: 574 EEKV 577
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 319 bits (820), Expect = e-105
Identities = 121/224 (54%), Positives = 156/224 (69%), Gaps = 11/224 (4%)
Query: 335 FNATRITVSNIHDRVTEL-QKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNR 393
+++ + + + + + + K GFWEEFE+LQQQE + L++R+EGQ+ +N+NKNR
Sbjct: 6 HHSSGVDLGTENLYFQSMAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNR 65
Query: 394 YKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG--------KSYIATQGCLPSTM 445
YKNILPFDHTRV L D D + P ++YINAN I E KSYIATQGCL +T+
Sbjct: 66 YKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTV 125
Query: 446 NDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYIL 505
NDFW MV+QEN RVIVMTTKE+ERGK+KC KYWPD++ K YG + V N+ ES DY L
Sbjct: 126 NDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGVMRVRNVKESAAHDYTL 185
Query: 506 REFLVSKGS--ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
RE +SK + R ++ YHF+ WPDHGVPSDPG VL+FL EV
Sbjct: 186 RELKLSKVGQGNTERTVWQYHFRTWPDHGVPSDPGGVLDFLEEV 229
Score = 118 bits (297), Expect = 1e-29
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 29/108 (26%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
+ I GPVVVHCSAGIGRTGTFIVID+++D I++ G+DC+ID+ +TIQ
Sbjct: 234 ESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQM---------- 283
Query: 161 SSTSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQRL 204
V SGMVQTEAQY+F+Y+AVQHYI+TL +R+
Sbjct: 284 ---------------VRSQRSGMVQTEAQYRFIYMAVQHYIETLQRRI 316
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 318 bits (818), Expect = e-105
Identities = 73/242 (30%), Positives = 121/242 (50%), Gaps = 14/242 (5%)
Query: 312 LIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQ 371
+ H+ + V+ ++ + +ATR+ + +R L+K+ + E+E + +
Sbjct: 1 MHHHHHHSSGVDLGTENLYFQSMVDATRVP---MDERFRTLKKKLEE-GMVFTEYEQIPK 56
Query: 372 QESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG 431
+++ +F+ +N ++R + ++P++ RV+L E YINA++I+ GG
Sbjct: 57 KKANGIFS--TAALPENAERSRIREVVPYEENRVELIPTKE--NNTGYINASHIKVVVGG 112
Query: 432 --KSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPD---DHQSKT 486
YIATQG LP T +DFW MVW++ V VI M T E E G+ K +YWP H S T
Sbjct: 113 AEWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYWPKLGSKHSSAT 172
Query: 487 YGAVCVNNMYESVTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLY 545
YG V + + + Y V S R ++H + WPDHG P D L++L
Sbjct: 173 YGKFKVTTKFRTDSVCYATTGLKVKHLLSGQERTVWHLQYTDWPDHGCPEDVQGFLSYLE 232
Query: 546 EV 547
E+
Sbjct: 233 EI 234
Score = 108 bits (272), Expect = 4e-26
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 26/100 (26%)
Query: 106 HGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSL 165
H P+VVHCSAG+GRTG I+ ++++ ++ + ++++ ++
Sbjct: 252 HPPIVVHCSAGVGRTGVLILSELMIYCLEHNE---KVEVPMMLRLLR------------- 295
Query: 166 FSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLI 205
+ M+QT AQYKFVY + ++Q + RLI
Sbjct: 296 ---EQRM-----FMIQTIAQYKFVYQVLIQFLQ--NSRLI 325
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 303 bits (778), Expect = 2e-99
Identities = 108/194 (55%), Positives = 143/194 (73%), Gaps = 7/194 (3%)
Query: 361 GFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYI 420
GFWEEFESLQ+QE ++L R EGQ+ +N+ KNRYKNILPFDH+RV L+ D ++PG++YI
Sbjct: 1 GFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYI 60
Query: 421 NANYIQSEDGG-----KSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCA 475
NANYI+++ G K+YIA+QGCL +T+NDFW M WQEN RVIVMTT+E+E+G+NKC
Sbjct: 61 NANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCV 120
Query: 476 KYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--KGSESPRKIYHYHFQAWPDHGV 533
YWP+ + YG V N E TT+Y LR VS + R+I+HY + +WPDHGV
Sbjct: 121 PYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGV 180
Query: 534 PSDPGCVLNFLYEV 547
PS+PG VL+FL ++
Sbjct: 181 PSEPGGVLSFLDQI 194
Score = 115 bits (289), Expect = 9e-29
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 29/108 (26%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
+ + GP++VH SAGIGRTGT IVIDM+++ I GLDC+IDIQ+TIQ
Sbjct: 199 ESLPHAGPIIVHSSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQM---------- 248
Query: 161 SSTSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQRL 204
V SGMVQTEAQYKF+Y+A+ +I+T ++L
Sbjct: 249 ---------------VRAQRSGMVQTEAQYKFIYVAIAQFIETTKKKL 281
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 302 bits (776), Expect = 9e-99
Identities = 83/223 (37%), Positives = 122/223 (54%), Gaps = 6/223 (2%)
Query: 325 SGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQ 384
S +V + I + N + + S F EEFE L+
Sbjct: 11 SSGLVPRGSHMASRPILIKNFAEHYRLMSA--DSDFRFSEEFEELKHVG--RDQPCTFAD 66
Query: 385 KLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPST 444
NR KNR+ NILP+DH+R KL+ VD+D G++YINANY+ + + +I TQG L ST
Sbjct: 67 LPCNRPKNRFTNILPYDHSRFKLQPVDDD-EGSDYINANYVPGHNSPREFIVTQGPLHST 125
Query: 445 MNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYI 504
+DFW M W+ N R IVM T+ E+G+ KC +YWP+D YG + V + +S D++
Sbjct: 126 RDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTVPVFYGDIKVQILNDSHYADWV 185
Query: 505 LREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ EF++ +GSE R + H+HF WPD GVP+ P ++ F+
Sbjct: 186 MTEFMLCRGSEQ-RILRHFHFTTWPDFGVPNPPQTLVRFVRAF 227
Score = 100 bits (250), Expect = 2e-23
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 26/94 (27%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
P+VVHCSAG+GR+GTFI +D IL QI +DI +
Sbjct: 236 RPIVVHCSAGVGRSGTFITLDRILQQINTSD---YVDIFGIVYA---------------- 276
Query: 167 SI-TYKPYPNVSGMVQTEAQYKFVYLAVQHYIQT 199
+ + + MVQTE QY ++ + ++
Sbjct: 277 -MRKERVW-----MVQTEQQYICIHQCLLAVLEG 304
Score = 76.2 bits (188), Expect = 2e-15
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 75 SAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
P+VVHCSAG+GR+GTFI +D IL QI V
Sbjct: 234 EQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYV 268
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 303 bits (777), Expect = 2e-98
Identities = 85/232 (36%), Positives = 125/232 (53%), Gaps = 9/232 (3%)
Query: 317 KRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRH 376
KR + + +P + I V N + Q ++ GF EE+E L+
Sbjct: 4 KRKDAKNNEVSFSQI-KPKKSKLIRVENFEAYFKKQQADS--NCGFAEEYEDLKLIGIS- 59
Query: 377 LFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIA 436
+ + +NR KNRY N+LP+D +RVKL + +YINANY+ K +IA
Sbjct: 60 -LPKYAAEIAENRGKNRYNNVLPYDISRVKLSV--QTHSTDDYINANYMPGYHSKKDFIA 116
Query: 437 TQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMY 496
TQG LP+T+ DFW MVW++NV IVM TK +E+G+ KC +YWP Q++ YG + V
Sbjct: 117 TQGPLPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSK-QAQDYGDITVAMTS 175
Query: 497 ESVTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
E V ++ +R+F+V S + +HF +WPDHGVP ++NF Y V
Sbjct: 176 EVVLPEWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLV 227
Score = 103 bits (259), Expect = 2e-24
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 25/121 (20%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
QI P++VHCSAG+GRTGTFI ID ++ QI+ +D+ + L+
Sbjct: 232 KQIPPESPILVHCSAGVGRTGTFIAIDRLIYQIENEN---TVDVYGIVYD----LRMHRP 284
Query: 161 SSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIE-EQKSIQLGREYTN 219
MVQTE QY F+ V I+ ++ ++ Y N
Sbjct: 285 -----------------LMVQTEDQYVFLNQCVLDIIRAQKDSKVDLIYQNTTAMTIYEN 327
Query: 220 I 220
+
Sbjct: 328 L 328
Score = 76.6 bits (189), Expect = 3e-15
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 75 SAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
P++VHCSAG+GRTGTFI ID ++ QI+ V
Sbjct: 236 PESPILVHCSAGVGRTGTFIAIDRLIYQIENENTV 270
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 299 bits (769), Expect = 5e-98
Identities = 83/209 (39%), Positives = 128/209 (61%), Gaps = 9/209 (4%)
Query: 340 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 399
I V+++ +T++++ GF EE+E+L + ++ + ++ +NRNKNRY NI+
Sbjct: 4 IRVADLLQHITQMKR--GQGYGFKEEYEALPEGQT---ASWDTAKEDENRNKNRYGNIIS 58
Query: 400 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 459
+DH+RV+L +D D P ++YINANYI + YIATQG + T+ DFW M+WQEN
Sbjct: 59 YDHSRVRLLVLDGD-PHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSAS 117
Query: 460 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPR 518
IVM T +E G+ KC +YWPDD ++ YG + V + +Y++R F V K G R
Sbjct: 118 IVMVTNLVEVGRVKCVRYWPDD--TEVYGDIKVTLIETEPLAEYVIRTFTVQKKGYHEIR 175
Query: 519 KIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
++ +HF +WPDHGVP +L F+ +V
Sbjct: 176 ELRLFHFTSWPDHGVPCYATGLLGFVRQV 204
Score = 100 bits (251), Expect = 1e-23
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 32/101 (31%)
Query: 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNS 161
+ GP+VVHCSAG GRTG FI ID +LD + G +DI ++
Sbjct: 208 NPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEG---VVDIFNCVRE----------- 253
Query: 162 STSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQ 198
+ +VQTE QY FV+ A+
Sbjct: 254 --------------LRAQRVNLVQTEEQYVFVHDAILEACL 280
Score = 77.2 bits (191), Expect = 9e-16
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 65 RDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
Q AGP+VVHCSAG GRTG FI ID +LD + G V
Sbjct: 201 VRQVKFLNPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVV 245
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 301 bits (772), Expect = 6e-98
Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 15/224 (6%)
Query: 338 TRITVSNIHDRVTEL-QKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKN 396
+ ++ V + + ++++ GF E+FE +Q+ + T +N++KNRY N
Sbjct: 16 ENLYFQSMKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYIN 75
Query: 397 ILPFDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQE 455
IL +DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW M+W++
Sbjct: 76 ILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQ 135
Query: 456 NVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK--- 512
N +IVM T +E+G+ KC +YWP + S+ YG + V + Y +R F +
Sbjct: 136 NTGIIVMITNLVEKGRRKCDQYWPTE-NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKV 194
Query: 513 ---------GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
G ++ R + YH+ WPD GVP VL F+
Sbjct: 195 KKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRS 238
Score = 101 bits (253), Expect = 1e-23
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 32/101 (31%)
Query: 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNS 161
++ + GPV+VHCSAG+GRTGT+IVID +L QIK +++ ++H
Sbjct: 242 RMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKS---TVNVLGFLKH----------- 287
Query: 162 STSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQ 198
+ + +VQTE QY F++ A+ I
Sbjct: 288 --------------IRTQRNYLVQTEEQYIFIHDALLEAIL 314
Score = 77.7 bits (192), Expect = 9e-16
Identities = 23/41 (56%), Positives = 28/41 (68%)
Query: 69 NMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+ GPV+VHCSAG+GRTGT+IVID +L QIK V
Sbjct: 239 SAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTV 279
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 299 bits (767), Expect = 1e-97
Identities = 76/210 (36%), Positives = 114/210 (54%), Gaps = 8/210 (3%)
Query: 340 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 399
+ + + + ++ K S F +FE L+ NR KNRY NILP
Sbjct: 5 VQLDDFDAYIKDMAK--DSDYKFSLQFEELKLIG--LDIPHFAADLPLNRCKNRYTNILP 60
Query: 400 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 459
+D +RV+L ++E+ GA+YINANYI + + YIATQG LP T NDFW MV Q+ ++
Sbjct: 61 YDFSRVRLVSMNEE-EGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQI 119
Query: 460 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSESPRK 519
IVM T+ E+ + KC YWP + YG + V + E D+ R F ++ E +
Sbjct: 120 IVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMISEEEQDDWACRHFRINYADEM-QD 178
Query: 520 IYHYHFQAWPDHGVPS--DPGCVLNFLYEV 547
+ H+++ AWPDHGVP+ +L F++ V
Sbjct: 179 VMHFNYTAWPDHGVPTANAAESILQFVHMV 208
Score = 101 bits (255), Expect = 4e-24
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 24/103 (23%)
Query: 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNS 161
K GP+++HCSAG+GRTGTFI +D +L I+ H +DI + ++
Sbjct: 212 ATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHE---FVDILGLVSE----MR----- 259
Query: 162 STSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRL 204
+Y+ MVQTE QY F++ VQ Q+
Sbjct: 260 -------SYRM-----SMVQTEEQYIFIHQCVQLMWMKKKQQF 290
Score = 76.1 bits (188), Expect = 2e-15
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 75 SAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
S GP+++HCSAG+GRTGTFI +D +L I+ H V
Sbjct: 215 SKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHEFV 249
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 299 bits (767), Expect = 2e-97
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 9/213 (4%)
Query: 340 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLDNRNKNRYK 395
+ + +R+ A EF +Q + + + G + +N KNRYK
Sbjct: 10 DSARSFLERLEARGGRE--GAVLAGEFSDIQACSAAWKADGVCSTVAGSRPENVRKNRYK 67
Query: 396 NILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQE 455
++LP+D TRV L + E+ ++YIN N+I+ DG +YIATQG LP T+ DFW +VW+
Sbjct: 68 DVLPYDQTRVILSLLQEE-GHSDYINGNFIRGVDGSLAYIATQGPLPHTLLDFWRLVWEF 126
Query: 456 NVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTT-DYILREFLVSKGS 514
V+VI+M +E+E G+ +C +YW + + G C+ + E D +LR V+
Sbjct: 127 GVKVILMACREIENGRKRCERYWAQEQEPLQTGLFCITLIKEKWLNEDIMLRTLKVTFQK 186
Query: 515 ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
ES R +Y + +WPD GVPS P +L + E
Sbjct: 187 ES-RSVYQLQYMSWPDRGVPSSPDHMLAMVEEA 218
Score = 111 bits (280), Expect = 2e-27
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 23/98 (23%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
P+ VHCSAG GRTG +D + + + + + +
Sbjct: 227 EPLCVHCSAGCGRTGVLCTVDYVRQLLLTQMIPPDFSLFDVVLK---------------- 270
Query: 167 SI-TYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQR 203
+ +P VQTE QY+F+Y V + Q
Sbjct: 271 -MRKQRP-----AAVQTEEQYRFLYHTVAQMFCSTLQN 302
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 298 bits (765), Expect = 4e-97
Identities = 79/208 (37%), Positives = 121/208 (58%), Gaps = 7/208 (3%)
Query: 345 IHDRVTELQKENSSKAGFWEEFESLQQQESRH----LFTRREGQKLDNRNKNRYKNILPF 400
+ + E Q + +K F EF L++Q +++ + +K N KNRYK+ILP+
Sbjct: 7 LQKFLDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPY 66
Query: 401 DHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVI 460
D++RV+L + D + YINAN+I+ G K+YIATQG L +T+ DFW M+W+ +V +I
Sbjct: 67 DYSRVELSLITSD-EDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLII 125
Query: 461 VMTTKEMERGKNKCAKYWPDDHQ-SKTYGAVCVNNMYESVTTDYILREFLVSKGSESPRK 519
VM E E GK KC +YW + + +G V+ E +DYI+R V SE+ R
Sbjct: 126 VMACMEYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFNSET-RT 184
Query: 520 IYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
IY +H++ WPDH VPS +L +++V
Sbjct: 185 IYQFHYKNWPDHDVPSSIDPILELIWDV 212
Score = 110 bits (277), Expect = 6e-27
Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 29/106 (27%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
P+ +HCSAG GRTG ID +K + + I+
Sbjct: 221 VPICIHCSAGCGRTGVICAIDYTWMLLKDGIIPENFSVFSLIRE---------------- 264
Query: 167 SITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQ 208
+ +VQT+ QY+ VY AV + + ++
Sbjct: 265 ---------MRTQRPSLVQTQEQYELVYNAVLELFKRQMDVIRDKH 301
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 296 bits (759), Expect = 2e-96
Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 12/210 (5%)
Query: 340 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 399
I ++ +LQ ++ +E+E L+ + +NR KNRY NILP
Sbjct: 9 IKINQFEGHFMKLQADS--NYLLSKEYEELKDVG--RNQSCDIALLPENRGKNRYNNILP 64
Query: 400 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 459
+D TRVKL G++YINA+YI + + YI TQG LP T +DFW MVW++NV
Sbjct: 65 YDATRVKLS------GGSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQNVHN 118
Query: 460 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVS--KGSESP 517
IVM T+ +E+G+ KC YWP D S YG + + + ESV ++ +REF + + ++
Sbjct: 119 IVMVTQCVEKGRVKCDHYWPADQDSLYYGDLILQMLSESVLPEWTIREFKICGEEQLDAH 178
Query: 518 RKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
R I H+H+ WPDHGVP ++ F+ V
Sbjct: 179 RLIRHFHYTVWPDHGVPETTQSLIQFVRTV 208
Score = 106 bits (266), Expect = 1e-25
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 24/103 (23%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
++ GP VVHCSAG+GRTGTFI +D IL Q+ +DI + L+
Sbjct: 213 NRSPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKD---SVDIYGAVHD----LR---- 261
Query: 161 SSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQR 203
+ MVQTE QY +++ V+ ++ R
Sbjct: 262 -------------LHRVHMVQTECQYVYLHQCVRDVLRARKLR 291
Score = 76.5 bits (189), Expect = 2e-15
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 75 SAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
AGP VVHCSAG+GRTGTFI +D IL Q+ V
Sbjct: 217 GAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDSV 251
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 296 bits (760), Expect = 3e-96
Identities = 75/240 (31%), Positives = 119/240 (49%), Gaps = 15/240 (6%)
Query: 314 EHYKRNPMV-ETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQ 372
+ K + + V+ + + + + T +N+ + L+ + +E E+LQ
Sbjct: 3 DSDKDHSFLTNDELAVLPVVKVLPSGKYTGANLKSVIRVLRG-LLDQGIPSKELENLQ-- 59
Query: 373 ESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGK 432
E + L GQ +NR KNRYKNILP+D TRV L YINA++I+ G +
Sbjct: 60 ELKPLDQCLIGQTKENRRKNRYKNILPYDATRVPLG------DEGGYINASFIKIPVGKE 113
Query: 433 S--YIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPD--DHQSKTYG 488
YIA QG LP+T+ DFW M+W++ VI M T+E+E K KC +YWP+ +
Sbjct: 114 EFVYIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNILGKTTMVSN 173
Query: 489 AVCVNNMYESVTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ + + +++R + + R I H +F AWPDH PS P +L F+ +
Sbjct: 174 RLRLALVRMQQLKGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPSQPDDLLTFISYM 233
Score = 105 bits (264), Expect = 3e-25
Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 34/111 (30%)
Query: 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNS 161
I + GP++ HCSAGIGR+GT I ID++L I + D + DI ++
Sbjct: 235 HIHRSGPIITHCSAGIGRSGTLICIDVVLGLISQ---DLDFDISDLVRC----------- 280
Query: 162 STSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQ 208
+ GMVQTE QY F Y + + + L EEQ
Sbjct: 281 --------------MRLQRHGMVQTEDQYIFCYQVILYVLTRLQAE--EEQ 315
Score = 76.2 bits (188), Expect = 3e-15
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 75 SAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+GP++ HCSAGIGR+GT I ID++L I +
Sbjct: 238 RSGPIITHCSAGIGRSGTLICIDVVLGLISQDLDF 272
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 295 bits (757), Expect = 6e-96
Identities = 79/213 (37%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 340 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 399
+ V + + + +++ F EEF +L + T K +N+ KNRY NILP
Sbjct: 11 LPVDKLEEEINRRMADDN--KLFREEFNALPACPIQ--ATCEAASKEENKEKNRYVNILP 66
Query: 400 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 459
+DH+RV L V+ P ++YINA++I +IA QG T+NDFW M+W++N
Sbjct: 67 YDHSRVHLTPVEGV-PDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTAT 125
Query: 460 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-----GS 514
IVM T ER + KCA+YWPD TYG V V+ +V DY +R+F + +
Sbjct: 126 IVMVTNLKERKECKCAQYWPDQ-GCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVGDVTNR 184
Query: 515 ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ R I +HF +WPD GVP P +L FL +V
Sbjct: 185 KPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKV 217
Score = 100 bits (250), Expect = 2e-23
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 32/96 (33%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
G +VVHCSAG+GRTGTF+VID +LD + ++D+ +
Sbjct: 226 GAIVVHCSAGVGRTGTFVVIDAMLDMMHSER---KVDVYGFVSR---------------- 266
Query: 167 SITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQ 198
+ MVQT+ QY F+Y A+ +
Sbjct: 267 ---------IRAQRCQMVQTDMQYVFIYQALLEHYL 293
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 293 bits (751), Expect = 8e-95
Identities = 75/230 (32%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 323 ETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRRE 382
E + K P ++ ++ + + +L E +F+ L +++ T
Sbjct: 9 EPDFQYIPEKAPLDSVHQDDHSLRESMIQL-AEGLITGTVLTQFDQLYRKK--PGMTMSC 65
Query: 383 GQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG----KSYIATQ 438
+ N +KNRY++I P+D TRV LK +YINANYI E YIA Q
Sbjct: 66 AKLPQNISKNRYRDISPYDATRVILK------GNEDYINANYINMEIPSSSIINQYIACQ 119
Query: 439 GCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYES 498
G LP T DFW M W++ ++VM T ++ERG+ KC +YWP+ S +YG V E
Sbjct: 120 GPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPTGSSSYGCYQVTCHSEE 179
Query: 499 VTTDYILREFLVSK-GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
T YI R+ + R + + AWPDHGVP D L+F+ V
Sbjct: 180 GNTAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHV 229
Score = 104 bits (262), Expect = 7e-25
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 24/107 (22%)
Query: 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNS 161
+ K PVVVHCSAGIGRTG I ++ + I+ + + ++
Sbjct: 233 RAGKEEPVVVHCSAGIGRTGVLITMETAMCLIECNQ---PVYPLDIVRTMR--------- 280
Query: 162 STSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQ 208
+ M+QT +QY+FV A+ + + +
Sbjct: 281 -------DQRA-----MMIQTPSQYRFVCEAILKVYEEGFVKPLTTS 315
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 292 bits (750), Expect = 1e-94
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 13/221 (5%)
Query: 329 VHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDN 388
VH+ P +T+ + D V K G +EE+E ++++ + T N
Sbjct: 3 VHVPGP---HAMTIQELVDYV-----NARQKQGIYEEYEDIRREN--PVGTFHCSMSPGN 52
Query: 389 RNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDF 448
KNRY ++ D TRVKL +YINA+++ +YI TQG L +T DF
Sbjct: 53 LEKNRYGDVPCLDQTRVKLTKRSGH-TQTDYINASFMDGYKQKNAYIGTQGPLENTYRDF 111
Query: 449 WSMVWQENVRVIVMTTKEMERGKNKCAKYWPDD-HQSKTYGAVCVNNMYESVTTDYILRE 507
W MVW++ V VIVMTT+ E G+ KC +YWP + +G + V N+ Y
Sbjct: 112 WLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTT 171
Query: 508 FLVSKGSES-PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ E R++ H+ F +WPD+GVPS +++FL V
Sbjct: 172 LEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVV 212
Score = 103 bits (260), Expect = 1e-24
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 24/93 (25%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
P+VVHCSAGIGRTGTF +D+ L Q+++ G +++ +T+
Sbjct: 234 PPIVVHCSAGIGRTGTFCSLDICLAQLEELG---TLNVFQTVSRMR-------------- 276
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQT 199
T + +QT QY F Y A+ + +
Sbjct: 277 --TQRA-----FSIQTPEQYYFCYKAILEFAEK 302
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 302 bits (774), Expect = 1e-94
Identities = 78/219 (35%), Positives = 119/219 (54%), Gaps = 8/219 (3%)
Query: 332 KQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNK 391
KQ N I + + + F EF+S+ + S+ F +E +K N+NK
Sbjct: 2 KQLMNVEPIHADILLETYKRKIADEG--RPFLAEFQSIPRVFSK--FPIKEARKPFNQNK 57
Query: 392 NRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSM 451
NRY +ILP+D+ RV+L +++ D G+ YINA+YI + YIA QG T++DFW M
Sbjct: 58 NRYVDILPYDYNRVELSEINGD-AGSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRM 116
Query: 452 VWQENVRVIVMTTKEMERGKNKCAKYWPD-DHQSKTYGAVCVNNMYESVTTDYILREFLV 510
+W++ VIVM T+ E +NKCA+YWP + ++ +G V V DYI+++ +
Sbjct: 117 IWEQKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRAFGDVVVKINQHKRCPDYIIQKLNI 176
Query: 511 S--KGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
K + R++ H F +WPDHGVP DP +L V
Sbjct: 177 VNKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRV 215
Score = 251 bits (643), Expect = 2e-75
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 27/255 (10%)
Query: 318 RNPMVETSG------TVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQ 371
R MV+ + F T + +S +H + ++K + E E +
Sbjct: 269 RCLMVQVEAQYILIHQALVEYNQFGETEVNLSELHPYLHNMKKRDPPSEPSPLEAEFQRL 328
Query: 372 QESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDE------------------D 413
R T+ G + +N++KNR N++P+D+ RV LK E
Sbjct: 329 PSYRSWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDS 388
Query: 414 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 473
++YINA++I S + IA QG L T+ DFW M++Q V+VIVM T+ +
Sbjct: 389 EEPSKYINASFIMSYWKPEVMIAAQGPLKETIGDFWQMIFQRKVKVIVMLTELKHGDQEI 448
Query: 474 CAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSES-PRKIYHYHFQAWPDHG 532
CA+YW + +TYG + V+ ++ Y LR F + R +Y Y + W
Sbjct: 449 CAQYWGEG--KQTYGDIEVDLKDTDKSSTYTLRVFELRHSKRKDSRTVYQYQYTNWSVEQ 506
Query: 533 VPSDPGCVLNFLYEV 547
+P++P +++ + V
Sbjct: 507 LPAEPKELISMIQVV 521
Score = 99.4 bits (248), Expect = 5e-22
Identities = 40/204 (19%), Positives = 65/204 (31%), Gaps = 37/204 (18%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
GP+VVH SAG+GRTGT+I ID +L+ ++ ++D+ +
Sbjct: 224 GPIVVHSSAGVGRTGTYIGIDAMLEGLEAEN---KVDVYGYVVKLR-------------- 266
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGREYTNIRCDCYD 226
+ MVQ EAQY ++ A+ Y Q + + L
Sbjct: 267 --RQRCL-----MVQVEAQYILIHQALVEYNQFGETEVNLSELHPYLHNMKKRDPPSEPS 319
Query: 227 LYGGEKFATLSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDF---VLSVRTD 283
+ + Y + + K KN R S P D+ L +
Sbjct: 320 -----PLEAEFQRLPSYRSWRTQHIGNQEENKSKN-----RNSNVIPYDYNRVPLKHELE 369
Query: 284 DKVTHVMIRCQAEKYDVGGGEQFD 307
++ D E
Sbjct: 370 MSKESEHDSDESSDDDSDSEEPSK 393
Score = 99.0 bits (247), Expect = 7e-22
Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 24/99 (24%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
++ K P+++HC G +TG F + +L+ + +DI + ++
Sbjct: 534 NKHHKSTPLLIHCRDGSQQTGIFCALLNLLESAETEE---VVDIFQVVKALR-------- 582
Query: 161 SSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQT 199
+ GMV T QY+F+Y +
Sbjct: 583 --------KARL-----GMVSTFEQYQFLYDVIASTYPA 608
Score = 76.7 bits (189), Expect = 7e-15
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 65 RDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
R + N + +GP+VVH SAG+GRTGT+I ID +L+ ++ V
Sbjct: 212 RRRVNAFSNFFSGPIVVHSSAGVGRTGTYIGIDAMLEGLEAENKV 256
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 289 bits (743), Expect = 4e-94
Identities = 71/211 (33%), Positives = 102/211 (48%), Gaps = 14/211 (6%)
Query: 342 VSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFD 401
+ + + +L K+ +FE L +++ + N +KNRYK++LP+D
Sbjct: 1 MDTLEGSMAQL-KKGLESGTVLIQFEQLYRKK--PGLAITFAKLPQNLDKNRYKDVLPYD 57
Query: 402 HTRVKLKDVDEDVPGAEYINANYIQSEDGG----KSYIATQGCLPSTMNDFWSMVWQENV 457
TRV L+ +YINA+Y+ E YIATQG LP T FW +VW + +
Sbjct: 58 TTRVLLQ------GNEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKL 111
Query: 458 RVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSES- 516
+IVM T ERG+ KC +YWPD +G + E T Y+ RE LV+
Sbjct: 112 SLIVMLTTLTERGRTKCHQYWPDPPDVMNHGGFHIQCQSEDCTIAYVSREMLVTNTQTGE 171
Query: 517 PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ H + AWPDHGVP D L F+ V
Sbjct: 172 EHTVTHLQYVAWPDHGVPDDSSDFLEFVNYV 202
Score = 101 bits (255), Expect = 4e-24
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 32/105 (30%)
Query: 106 HGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSL 165
PV+VHCSAGIGRTG + ++ + +++ I ++
Sbjct: 209 SEPVLVHCSAGIGRTGVLVTMETAMCLTERNL---PIYPLDIVRK--------------- 250
Query: 166 FSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQRLIE 206
+ + MVQT +QYKFV A+ + ++++
Sbjct: 251 ----------MRDQRAMMVQTSSQYKFVCEAILRVYEEGLVQMLD 285
Score = 76.9 bits (190), Expect = 9e-16
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 71 KYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+ + PV+VHCSAGIGRTG + ++ + +++ P+
Sbjct: 204 SLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNLPI 242
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 288 bits (740), Expect = 2e-93
Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 6/213 (2%)
Query: 338 TRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNI 397
+ +S H + ++ ++ +E+++L ++ T Q N KNR+ +
Sbjct: 7 ANMDISTGHMILAYMEDHLRNRDRLAKEWQALCAYQAEP-NTCATAQGEGNIKKNRHPDF 65
Query: 398 LPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGG-KSYIATQGCLPSTMNDFWSMVWQEN 456
LP+DH R+KLK ++YINA+ I D +YIATQG L T+ DFW MVW+
Sbjct: 66 LPYDHARIKLKVESSP-SRSDYINASPIIEHDPRMPAYIATQGPLSHTIADFWQMVWESG 124
Query: 457 VRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESV-TTDYILREFLVSK-GS 514
VIVM T +E G +C +YWPD+ + Y VN + E + D+++R F + +
Sbjct: 125 CTVIVMLTPLVEDGVKQCDRYWPDE-GASLYHVYEVNLVSEHIWCEDFLVRSFYLKNVQT 183
Query: 515 ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ R + +HF +WP G P+ +L+F +V
Sbjct: 184 QETRTLTQFHFLSWPAEGTPASTRPLLDFRRKV 216
Score = 105 bits (265), Expect = 2e-25
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 31/103 (30%)
Query: 106 HGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSL 165
P++VHCS G GRTGT+I+IDM+L+++ K EIDI T++H
Sbjct: 224 SCPIIVHCSDGAGRTGTYILIDMVLNRMAKG--VKEIDIAATLEH--------------- 266
Query: 166 FSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQRL 204
V G+V+++ Q++F AV + + + L
Sbjct: 267 ----------VRDQRPGLVRSKDQFEFALTAVAEEVNAILKAL 299
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 288 bits (739), Expect = 2e-93
Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 9/201 (4%)
Query: 348 RVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKL 407
++L+ +S EF + +E + KNRYK ILP +RV L
Sbjct: 20 TRSQLRDVVASSHLLQSEFMEIPMNF----VDPKEIDIPRHGTKNRYKTILPNPLSRVCL 75
Query: 408 KDVDEDVPGAEYINANYIQSEDG-GKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKE 466
+ + + YINANYI+ G K++IATQG + +T+NDFW MVWQE+ VIVM TK
Sbjct: 76 RPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDFWQMVWQEDSPVIVMITKL 135
Query: 467 MERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHFQ 526
E+ + KC YWP+ YG V V + +Y +R ++ +GS + + + HY +
Sbjct: 136 KEKNE-KCVLYWPEK--RGIYGKVEVLVTGVTECDNYTIRNLVLKQGSHT-QHVKHYWYT 191
Query: 527 AWPDHGVPSDPGCVLNFLYEV 547
+WPDH P +L + +V
Sbjct: 192 SWPDHKTPDSAQPLLQLMLDV 212
Score = 103 bits (259), Expect = 1e-24
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 32/105 (30%)
Query: 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNS 161
+ GPVVVHCSAGIGRTG FI + Q+K+ G +D +
Sbjct: 218 ASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEG---VVDALSIVCQ----------- 263
Query: 162 STSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQ 202
+ GMVQT QY+FV+ A+ + LS
Sbjct: 264 --------------LRVDRGGMVQTSEQYEFVHHALCLFESRLSP 294
Score = 76.2 bits (188), Expect = 2e-15
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 67 QTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+ + S GPVVVHCSAGIGRTG FI + Q+K+ G V
Sbjct: 213 EEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVV 255
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 296 bits (759), Expect = 3e-92
Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 16/221 (7%)
Query: 340 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 399
I V + EL +++ GF E+FE +Q+ + T +N++KNRY NIL
Sbjct: 3 IPVKQFVKHIGELYS--NNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILA 60
Query: 400 FDHTRVKLKDVD-EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVR 458
+DH+RVKL+ + +D ++YINANY+ + K+YIATQG L ST DFW M+W++N
Sbjct: 61 YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTG 120
Query: 459 VIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK------ 512
+IVM T +E+G+ KC +YWP + S+ YG + V + Y +R F +
Sbjct: 121 IIVMITNLVEKGRRKCDQYWPTE-NSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKG 179
Query: 513 ------GSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
G ++ R + YH+ WPD GVP VL F+
Sbjct: 180 QKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRS 220
Score = 240 bits (613), Expect = 5e-71
Identities = 56/268 (20%), Positives = 101/268 (37%), Gaps = 32/268 (11%)
Query: 307 DSLTQLIEHYK--------------RNPMVETSG-------TVVHLKQPFNATRITVSNI 345
DS+ Q I+ RN +V+T ++ +
Sbjct: 249 DSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALLEAILGKETEVSSNQLH 308
Query: 346 HDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRV 405
+ L K ++F+ + Q ++++ QK N+ KNR +++P + RV
Sbjct: 309 SYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECF-SAQKECNKEKNRNSSVVPSERARV 367
Query: 406 KLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTK 465
L + G +YINA+YI +I TQ LP T DFW M+W N ++IVM
Sbjct: 368 GLAPLPGM-KGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPD 426
Query: 466 EMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESV-----TTDYILREFLVSKGSES-PRK 519
+++ YWP +S A V + + I+ +F++ + +
Sbjct: 427 NQSLAEDEF-VYWPSREESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEATQDDYVLE 485
Query: 520 IYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ H+ WP+ P + +
Sbjct: 486 VRHFQCPKWPNPDAPISS--TFELINVI 511
Score = 99.4 bits (248), Expect = 5e-22
Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 28/109 (25%)
Query: 95 VIDMILD----QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQH 150
++I + + GP +VH G G + + Q++ +D+ + +
Sbjct: 504 TFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENEN---AVDVFQVAKM 560
Query: 151 AWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQT 199
+ +P G+ QY+F+Y A+ + T
Sbjct: 561 ----IN------------LMRP-----GVFTDIEQYQFIYKAMLSLVST 588
Score = 95.6 bits (238), Expect = 9e-21
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 24/92 (26%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
GPV+VHCSAG+GRTGT+IVID +L QIK +++ ++H ++ N
Sbjct: 229 GPVLVHCSAGVGRTGTYIVIDSMLQQIKDKS---TVNVLGFLKH----IRTQRN------ 275
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQ 198
+VQTE QY F++ A+ I
Sbjct: 276 -----------YLVQTEEQYIFIHDALLEAIL 296
Score = 77.5 bits (191), Expect = 5e-15
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 65 RDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+++ GPV+VHCSAG+GRTGT+IVID +L QIK V
Sbjct: 217 VRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTV 261
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 284 bits (728), Expect = 1e-91
Identities = 75/213 (35%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 338 TRITVSNIHDRVT--ELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYK 395
+ ++ + EL ++ EF + +E KNRYK
Sbjct: 16 ENLYFQSMSRVLQAEELHEKALDPFLLQAEFFEIPMN----FVDPKEYDIPGLVRKNRYK 71
Query: 396 NILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDG-GKSYIATQGCLPSTMNDFWSMVWQ 454
ILP H+RV L D D P + YINANYI+ G K YIATQG + ST+ DFW MVWQ
Sbjct: 72 TILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQ 131
Query: 455 ENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGS 514
E+ +IVM T E KC +YWP++ Y V + T DY LR + G+
Sbjct: 132 EHTPIIVMITNI-EEMNEKCTEYWPEE--QVAYDGVEITVQKVIHTEDYRLRLISLKSGT 188
Query: 515 ESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
E R + HY F +WPD P +L+ + EV
Sbjct: 189 EE-RGLKHYWFTSWPDQKTPDRAPPLLHLVREV 220
Score = 105 bits (265), Expect = 2e-25
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 24/97 (24%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
P++VH SAGIGRTG FI + Q+++ G +DI +T L+
Sbjct: 232 APIIVHSSAGIGRTGCFIATSICCQQLRQEG---VVDILKTTCQ----LRQDRG------ 278
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQR 203
GM+QT QY+FV+ + Y + LS +
Sbjct: 279 -----------GMIQTCEQYQFVHHVMSLYEKQLSHQ 304
Score = 75.4 bits (186), Expect = 5e-15
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 75 SAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
P++VH SAGIGRTG FI + Q+++ G V
Sbjct: 230 HCAPIIVHSSAGIGRTGCFIATSICCQQLRQEGVV 264
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 282 bits (725), Expect = 3e-91
Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 12/208 (5%)
Query: 344 NIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHT 403
+ H+ E ++ + S + ++ ++ + S F R + N+N+NRY+++ PFDH+
Sbjct: 5 HHHEMEKEFEQIDKSG-SWAAIYQDIRHEASD--FPCRVAKLPKNKNRNRYRDVSPFDHS 61
Query: 404 RVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMT 463
R+KL D D YINA+ I+ E+ +SYI TQG LP+T FW MVW++ R +VM
Sbjct: 62 RIKLHQEDND-----YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVML 116
Query: 464 TKEMERGKNKCAKYWPDDHQSK---TYGAVCVNNMYESVTTDYILREFLVSK-GSESPRK 519
+ ME+G KCA+YWP + + + + + E + + Y +R+ + ++ R+
Sbjct: 117 NRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETRE 176
Query: 520 IYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
I H+H+ WPD GVP P LNFL++V
Sbjct: 177 ILHFHYTTWPDFGVPESPASFLNFLFKV 204
Score = 110 bits (276), Expect = 7e-27
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 21/111 (18%)
Query: 106 HGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSL 165
HGPVVVHCSAGIGR+GTF + D L + K +DI++ +
Sbjct: 214 HGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMR------------- 260
Query: 166 FSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGRE 216
++ G++QT Q +F YLAV + + + + +L E
Sbjct: 261 ---KFRM-----GLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHE 303
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 290 bits (743), Expect = 4e-90
Identities = 82/212 (38%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Query: 340 ITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILP 399
I V ++ + + ++ F EEF SL + T K +NR KNRY NILP
Sbjct: 10 IPVEHLEEEIRIRSADDCK--QFREEFNSLPSGHIQ--GTFELANKEENREKNRYPNILP 65
Query: 400 FDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRV 459
DH+RV L +D +P ++YINA+YI +IA QG T+NDFW MVW++
Sbjct: 66 NDHSRVILSQLD-GIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQKSAT 124
Query: 460 IVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK----GSE 515
IVM T ER + KC +YWPD TYG + V V DY +R+F + G +
Sbjct: 125 IVMLTNLKERKEEKCHQYWPDQ-GCWTYGNIRVCVEDCVVLVDYTIRKFCIQPQLPDGCK 183
Query: 516 SPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+PR + HF +WPD GVP P +L FL +V
Sbjct: 184 APRLVSQLHFTSWPDFGVPFTPIGMLKFLKKV 215
Score = 256 bits (656), Expect = 2e-77
Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 31/269 (11%)
Query: 307 DSLTQLIEHYK--------------RNPMVET--------SGTVVHLKQPFNATRITVSN 344
D++ ++ + R MV+T + + ++
Sbjct: 244 DAMMAMMHAEQKVDVFEFVSRIRNQRPQMVQTDMQYTFIYQALLEYYLYGDTELDVSSLE 303
Query: 345 IHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTR 404
H + + K G EEF L R G N K R I+P+D R
Sbjct: 304 KHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMK-ENMRTGNLPANMKKARVIQIIPYDFNR 362
Query: 405 VKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTT 464
V L +YINA++I +IATQG L T+ DFW M+W+ IVM T
Sbjct: 363 VILSMKRGQ-EYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLT 421
Query: 465 KEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKG------SESPR 518
+ ER ++KC +YWP + S T+G + + ++++ +R+FLV+ E R
Sbjct: 422 EVQEREQDKCYQYWPTE-GSVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQGEQVR 480
Query: 519 KIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ +HF WP+ G+P++ +++ + V
Sbjct: 481 VVRQFHFHGWPEIGIPAEGKGMIDLIAAV 509
Score = 98.6 bits (246), Expect = 1e-21
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 24/97 (24%)
Query: 105 KHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTS 164
+ P+ VHCSAG GRTGTFI + IL+++K G +D+ + ++ L+
Sbjct: 517 GNHPITVHCSAGAGRTGTFIALSNILERVKAEG---LLDVFQAVKS----LR-------- 561
Query: 165 LFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLS 201
+P MVQT QY+F Y VQ +I S
Sbjct: 562 ----LQRP-----HMVQTLEQYEFCYKVVQDFIDIFS 589
Score = 93.2 bits (232), Expect = 4e-20
Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 25/133 (18%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
GP+VVHCSAG+GRTGTFIVID ++ + ++D+ + ++
Sbjct: 224 GPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQ---KVDVFEFVSR----IRNQRP------ 270
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGREYTNIRCDCYD 226
MVQT+ QY F+Y A+ Y L L +
Sbjct: 271 -----------QMVQTDMQYTFIYQALLEYYLYGDTELDVSSLEKHLQTMHGTTTHFDKI 319
Query: 227 LYGGEKFATLSEL 239
E F L+ +
Sbjct: 320 GLEEE-FRKLTNV 331
Score = 76.6 bits (189), Expect = 8e-15
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 65 RDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+ + AGP+VVHCSAG+GRTGTFIVID ++ + V
Sbjct: 212 LKKVKTLNPVHAGPIVVHCSAGVGRTGTFIVIDAMMAMMHAEQKV 256
Score = 69.3 bits (170), Expect = 2e-12
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
P+ VHCSAG GRTGTFI + IL+++K G +
Sbjct: 519 HPITVHCSAGAGRTGTFIALSNILERVKAEGLL 551
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 280 bits (718), Expect = 5e-90
Identities = 76/224 (33%), Positives = 106/224 (47%), Gaps = 15/224 (6%)
Query: 330 HLKQPFNATRITVSNIHDRV-----TELQKENSSKAGFWEEFESLQQQESRHLFTRREGQ 384
H +T+ + LQ++ S EEF + + +
Sbjct: 9 HHHHMNTPREVTLHFLRTAGHPLTRWALQRQPPSPKQLEEEFLKIPSNF----VSPEDLD 64
Query: 385 KLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDG-GKSYIATQGCLPS 443
+ +K+RYK ILP +RV L +YINANYI+ DG K YIATQG +P+
Sbjct: 65 IPGHASKDRYKTILPNPQSRVCLGRAQSQ-EDGDYINANYIRGYDGKEKVYIATQGPMPN 123
Query: 444 TMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDY 503
T++DFW MVWQE V +IVM T+ E GK KC YWP + +TYG + +Y
Sbjct: 124 TVSDFWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTE--EETYGPFQIRIQDMKECPEY 180
Query: 504 ILREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+R+ + E R + H F AWPDH P G +L + EV
Sbjct: 181 TVRQLTIQYQEER-RSVKHILFSAWPDHQTPESAGPLLRLVAEV 223
Score = 105 bits (264), Expect = 3e-25
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 24/103 (23%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTN 160
+ GP+VVHCSAGIGRTG FI + Q+K G E+DI + L+
Sbjct: 228 ETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKARG---EVDILGIVCQ----LRLDRG 280
Query: 161 SSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQR 203
GM+QT QY+F++ + Y L +
Sbjct: 281 -----------------GMIQTAEQYQFLHHTLALYAGQLPEE 306
Score = 75.4 bits (186), Expect = 5e-15
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 71 KYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+ + GP+VVHCSAGIGRTG FI + Q+K G V
Sbjct: 228 ETAAHPGPIVVHCSAGIGRTGCFIATRIGCQQLKARGEV 266
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 287 bits (737), Expect = 2e-89
Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 8/207 (3%)
Query: 342 VSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFD 401
++++ D + L+ + F +E+ES+ + FT N+ KNRY N++ +D
Sbjct: 2 ITDLADNIERLKA--NDGLKFSQEYESIDPGQQ---FTWENSNLEVNKPKNRYANVIAYD 56
Query: 402 HTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIV 461
H+RV L +D VPG++YINANYI +YIATQG LP TM DFW MVW++ +V
Sbjct: 57 HSRVILTSID-GVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVV 115
Query: 462 MTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSK-GSESPRKI 520
M T+ E+ + KC +YWP ++T G + V + Y +R F + K GS R++
Sbjct: 116 MMTRLEEKSRVKCDQYWPAR-GTETCGLIQVTLLDTVELATYTVRTFALHKSGSSEKREL 174
Query: 521 YHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ F AWPDHGVP P +L FL V
Sbjct: 175 RQFQFMAWPDHGVPEYPTPILAFLRRV 201
Score = 249 bits (639), Expect = 3e-75
Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 24/263 (9%)
Query: 307 DSLTQLIEHYK--------------RNPMVETSG-------TVVHLKQPFNATRITVSNI 345
D++ + ++H K RN MV+T ++ + +
Sbjct: 230 DAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAATCGHTEVPARNLY 289
Query: 346 HDRVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRV 405
Q E L H N+ KNR NI+P++ TRV
Sbjct: 290 AHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELTRV 349
Query: 406 KLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTK 465
L+ + V G++YINA+++ K+YIATQG L + DFW M+W+ N +IVM TK
Sbjct: 350 CLQPIR-GVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTK 408
Query: 466 EMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSES-PRKIYHYH 524
E G+ KC +YWP + +S Y V+ M E YILREF V+ + R I +
Sbjct: 409 LREMGREKCHQYWPAE-RSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQ 467
Query: 525 FQAWPDHGVPSDPGCVLNFLYEV 547
F WP+ GVP ++F+ +V
Sbjct: 468 FTDWPEQGVPKTGEGFIDFIGQV 490
Score = 99.7 bits (249), Expect = 3e-22
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 30/113 (26%)
Query: 95 VIDMI------LDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTI 148
ID I +Q + GP+ VHCSAG+GRTG FI + ++L++++ G +D+ +T+
Sbjct: 483 FIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEG---VVDMFQTV 539
Query: 149 QHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLS 201
+ L+ T +P MVQTE QY+ Y A Y+ +
Sbjct: 540 KT----LR------------TQRP-----AMVQTEDQYQLCYRAALEYLGSFD 571
Score = 97.4 bits (243), Expect = 2e-21
Identities = 37/155 (23%), Positives = 54/155 (34%), Gaps = 28/155 (18%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
GP+VVHCSAG+GRTG FIVID +L+++K +DI + ++ N
Sbjct: 210 GPMVVHCSAGVGRTGCFIVIDAMLERMKHEK---TVDIYGHVTC----MRSQRN------ 256
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGREYTNIRCDCYD 226
MVQTE QY F++ A+ + + + +
Sbjct: 257 -----------YMVQTEDQYVFIHEALLEAATCGHTEVPARNLYAHIQKLGQVPPGESVT 305
Query: 227 LYGGEKFATLSELVQFYMENQGKEAEQLILQKGKN 261
E S K KN
Sbjct: 306 AMELEFKLLASSKAHTSRFISANLPC----NKFKN 336
Score = 76.6 bits (189), Expect = 8e-15
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 65 RDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
+ + AGP+VVHCSAG+GRTG FIVID +L+++K V
Sbjct: 198 LRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTV 242
Score = 68.9 bits (169), Expect = 2e-12
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPV 109
GP+ VHCSAG+GRTG FI + ++L++++ G V
Sbjct: 501 GPITVHCSAGVGRTGVFITLSIVLERMRYEGVV 533
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 278 bits (714), Expect = 2e-89
Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 10/197 (5%)
Query: 354 KENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDED 413
+E ++ + + ++ + H + R + +NRN+NRY+++ P+DH+RVKL++ + D
Sbjct: 10 EELDTQRRWQPLYLEIRNES--HDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAEND 67
Query: 414 VPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNK 473
YINA+ + E+ +SYI TQG LP+T FW MVWQ+ + +VM + +E+ K
Sbjct: 68 -----YINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVK 122
Query: 474 CAKYWPDDHQSKT--YGAVCVNNMYESVTTDYILREFLVSKGSES-PRKIYHYHFQAWPD 530
CA+YWP D Q V + E V + Y + + + R I H+H+ WPD
Sbjct: 123 CAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPD 182
Query: 531 HGVPSDPGCVLNFLYEV 547
GVP P LNFL++V
Sbjct: 183 FGVPESPASFLNFLFKV 199
Score = 110 bits (277), Expect = 6e-27
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 106 HGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSL 165
HGP V+HCSAGIGR+GTF ++D L ++K +I+I++ + +
Sbjct: 209 HGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGD---DINIKQVLLNMR------------- 252
Query: 166 FSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGREYTNIRCD 223
Y+ G++QT Q +F Y+A+ + + +++ +L +E + D
Sbjct: 253 ---KYRM-----GLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFD 302
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 272 bits (698), Expect = 4e-87
Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 16/207 (7%)
Query: 354 KENSSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVK--LKDVD 411
+ + EF LQ+QE + L NR+KNRY +IL + T LK V
Sbjct: 13 STRAQYSRMQREFVQLQRQE--NPRNINFTTSLKNRHKNRYLDILANEETIYPPVLKAVG 70
Query: 412 EDVPGAEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGK 471
YIN N I + +++A Q +P + DF + ++ V ++VM TK E G
Sbjct: 71 AQPGRYPYINGNLIDLD-LPHTFVACQAPVPQGVPDFLETLSEKKVDLVVMLTKLREGGV 129
Query: 472 NKCAKYWPDDHQSK------TYGAVCVNNMYES-----VTTDYILREFLVSKGSESPRKI 520
K +YWP++ + + A+ V E+ D + R ++ + ++
Sbjct: 130 LKAERYWPEEEEDSLSFPESGHDAIKVTRDAEASYEVDAELDIVRRPLVIHVPGKPMHRV 189
Query: 521 YHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ WPDHGVP L +
Sbjct: 190 LQVQYVGWPDHGVPESAASFDELLSVI 216
Score = 103 bits (258), Expect = 2e-24
Identities = 26/107 (24%), Positives = 37/107 (34%), Gaps = 30/107 (28%)
Query: 102 QIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNS 161
P++VHCSAGIGRTGT I L I + G+ + + +
Sbjct: 218 NCVTTSPILVHCSAGIGRTGTLIGAYAALLHI-ERGILTDSTVYSIVAA----------- 265
Query: 162 STSLFSITYKPYPNV----SGMVQTEAQYKFVYLAVQHYIQTLSQRL 204
+ GMVQ QY +Y+ V + L
Sbjct: 266 --------------MKQKRFGMVQRLEQYAVIYMTVLGRLGVDISGL 298
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 268 bits (687), Expect = 3e-86
Identities = 62/168 (36%), Positives = 91/168 (54%), Gaps = 3/168 (1%)
Query: 381 REGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQGC 440
R G N KNR I+P++ RV + + +Y+NA++I SYIA+QG
Sbjct: 2 RTGNLPANMKKNRVLQIIPYEFNRVIIPVKRGE-ENTDYVNASFIDGYRQKDSYIASQGP 60
Query: 441 LPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVT 500
L T+ DFW M+W+ IVM T+ ERG+ KCA+YWP D +YG + V E
Sbjct: 61 LLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPSD-GLVSYGDITVELKKEEEC 119
Query: 501 TDYILREFLVSKGSES-PRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
Y +R+ LV+ E+ R+I +HF WP+ G+PSD ++N + V
Sbjct: 120 ESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAV 167
Score = 103 bits (260), Expect = 3e-25
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 24/95 (25%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
P+ VHCSAG GRTGTF + +L+++K G +D+ +T++
Sbjct: 177 HPITVHCSAGAGRTGTFCALSTVLERVKAEG---ILDVFQTVKSLR-------------- 219
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLS 201
+P MVQT QY+F Y VQ YI S
Sbjct: 220 --LQRP-----HMVQTLEQYEFCYKVVQEYIDAFS 247
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 240 bits (615), Expect = 7e-75
Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 25/200 (12%)
Query: 357 SSKAGFWEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPG 416
++A +L+ + R Q NR+++I T V+
Sbjct: 30 EARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRRQTAVRA--------- 80
Query: 417 AEYINANYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCA- 475
+NANYIQ + IA Q L S + + M+ + V+ + E +
Sbjct: 81 --DLNANYIQVGN--TRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGM 136
Query: 476 -KYWPDDHQSKTYGAVCVNNMYESVT---TDYILREFLVS--KGSESPRKIYHYHFQAWP 529
Y+ S TYG++ V + + + ++ + + + H WP
Sbjct: 137 PDYFRQ---SGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWP 193
Query: 530 DHGVPSD--PGCVLNFLYEV 547
D S + + + +
Sbjct: 194 DQTAVSSEVTKALASLVDQT 213
Score = 86.7 bits (215), Expect = 7e-19
Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 25/94 (26%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
V+H AG+GRT I + D + ++ ++ + ++ N
Sbjct: 235 LRPVIHSRAGVGRTAQLIGAMCMNDSR-----NSQLSVEDMVSQ----MRVQRNGI---- 281
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTL 200
MVQ + Q + + + L
Sbjct: 282 ------------MVQKDEQLDVLIKLAEGQGRPL 303
Score = 63.6 bits (155), Expect = 4e-11
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 75 SAGPVVVHCSAGIGRTGTFIVIDMILDQIKK 105
S V+H AG+GRT I + D
Sbjct: 233 SKLRPVIHSRAGVGRTAQLIGAMCMNDSRNS 263
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 215 bits (549), Expect = 3e-64
Identities = 36/225 (16%), Positives = 68/225 (30%), Gaps = 21/225 (9%)
Query: 333 QPFNATRITVSNIHDRVT--ELQKENSSKAGFWEEFESLQQQ----ESRHLFTRREGQKL 386
+ V D+ + EL + +E +++ + E+ +
Sbjct: 85 SQWGTCGGEVERWVDKASTHELTQAVKKIHVIAKELKNVTAELEKIEAGAPMPQTMSGPT 144
Query: 387 DNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIATQG--CLPST 444
+ +I T+VKL D +N DG +A P
Sbjct: 145 LGLARFAVSSIPINQQTQVKLSDGMPV-----PVNTLTF---DGKPVALAGSYPKNTPDA 196
Query: 445 MNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQSKTYGAVCVNNMYESVTTDYI 504
+ M+ ++ +V+ T E + + + P S T+G V N+ S +
Sbjct: 197 LEAHMKMLLEKECSCLVVLTSEDQM---QAKQLPPYFRGSYTFGEVHTNSQKVSSASQGE 253
Query: 505 LREF--LVSKGSESPRKIYHYHFQAWPDHGVPSDPGCVLNFLYEV 547
+ + E I H + WPDH + V
Sbjct: 254 AIDQYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRV 298
Score = 90.3 bits (224), Expect = 1e-19
Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 27/93 (29%)
Query: 107 GPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPSTNSSTSLF 166
++HC G+GRTGT ++ D ++++ + S N+
Sbjct: 315 HLPMIHCLGGVGRTGTMAAALVLKDN-------PHSNLEQVRAD----FRDSRNNR---- 359
Query: 167 SITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQT 199
M++ +Q+ + + T
Sbjct: 360 ------------MLEDASQFVQLKAMQAQLLMT 380
Score = 66.8 bits (163), Expect = 5e-12
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 65 RDQTNMKYSISAGPVVVHCSAGIGRTGTFIVIDMILDQIK 104
++ + S ++HC G+GRTGT ++ D
Sbjct: 303 QNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPH 342
>2cia_A Cytoplasmic protein NCK2; SH2-domain, SH3 domain, phosphorylation,
binding specificity; HET: PTR MPD; 1.45A {Homo sapiens}
PDB: 1z3k_A 2ci9_A* 2ci8_A*
Length = 102
Score = 124 bits (314), Expect = 3e-34
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
+AE + ++G G FL+R+S+S P DF +S++ K H ++ Y + G +F +
Sbjct: 15 HQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCI-GQRRFHT 73
Query: 309 LTQLIEHYKRNPMV-ETSGTVVHLKQP 334
+ +L+EHYK+ P+ G ++L +
Sbjct: 74 MDELVEHYKKAPIFTSEHGEKLYLVRA 100
Score = 33.0 bits (76), Expect = 0.059
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 220 IRCDC--YDLYGGEKFATLSELVQFYMENQGKEAEQLIL 256
++ Y + G +F T+ ELV+ Y + +E
Sbjct: 57 VQLVDNVYCI-GQRRFHTMDELVEHYKKAPIFTSEHGEK 94
>2dlz_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 125 bits (315), Expect = 4e-34
Identities = 22/92 (23%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
++ + L L+ +G++L+RE ++ F +S++ +D+V H+ + + + ++FD
Sbjct: 25 RQQTDNL-LKSHASGTYLIRERPAEAERFAISIKFNDEVKHIKVVEKDNWIHITEAKKFD 83
Query: 308 SLTQLIEHYKRNPMVET-SGTVVHLKQPFNAT 338
SL +L+E+Y+ + + E+ LK P++
Sbjct: 84 SLLELVEYYQCHSLKESFKQLDTTLKYPYSGP 115
Score = 33.0 bits (76), Expect = 0.074
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 220 IRCD--CYDLYGGEKFATLSELVQFYMENQGKEAEQ 253
+ + +KF +L ELV++Y + KE+ +
Sbjct: 67 VVEKDNWIHITEAKKFDSLLELVEYYQCHSLKESFK 102
>2gsb_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 119
Score = 124 bits (314), Expect = 5e-34
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
+EA L++ G+ SFLVR S + PGD+ L RT++ + I + GG ++
Sbjct: 25 KQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENIQRFKICPTPNNQFMMGGRYYN 84
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQP 334
S+ +I+HY++ +VE +LK+P
Sbjct: 85 SIGDIIDHYRKEQIVE----GYYLKEP 107
Score = 34.2 bits (79), Expect = 0.024
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQGKEAEQLI 255
+ + GG + ++ +++ Y + Q E L
Sbjct: 73 NNQFMMGGRYYNSIGDIIDHYRKEQIVEGYYLK 105
>3tkz_A Tyrosine-protein phosphatase non-receptor type 11; SH2 domain,
protein protein interactions, PTR residues, HYDR peptide
complex; HET: PTR; 1.80A {Homo sapiens} PDB: 3tl0_A*
1aya_A* 1ayb_A* 1ayc_A* 1ayd_A
Length = 109
Score = 122 bits (308), Expect = 2e-33
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
G EAE L+L +G +GSFL R S+S PGDF LSVR + VTH+ I+ + YD+ GGE+F
Sbjct: 16 GVEAENLLLTRGVDGSFLARPSKSNPGDFTLSVRRNGAVTHIKIQNTGDYYDLYGGEKFA 75
Query: 308 SLTQLIEHYKRNP--MVETSGTVVHLKQPFN 336
+L +L+++Y + + E +G V+ LK P N
Sbjct: 76 TLAELVQYYMEHHGQLKEKNGDVIELKYPLN 106
Score = 37.6 bits (88), Expect = 0.001
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQGKEAEQL 254
D YDLYGGEKFATL+ELVQ+YME+ G+ E+
Sbjct: 64 DYYDLYGGEKFATLAELVQYYMEHHGQLKEKN 95
>3eaz_A Tyrosine-protein kinase CSK; SH2, disulfide, oxidized reduced,
ATP-binding, cell membrane, cytoplasm, membrane,
nucleotide-binding, phosphoprotein; 1.31A {Homo sapiens}
PDB: 3eac_A
Length = 106
Score = 121 bits (307), Expect = 3e-33
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
++AE+L L + G FLVRES + PGD+ L V +D KV H I A K + F+
Sbjct: 17 REQAERL-LYPPETGLFLVRESTNYPGDYTLCVSSDGKVEHYRIMYHASKLSIDEEVYFE 75
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQP 334
+L QL+EHY + G L +P
Sbjct: 76 NLMQLVEHYTSDAD----GLCTRLIKP 98
Score = 34.9 bits (81), Expect = 0.014
Identities = 6/31 (19%), Positives = 10/31 (32%), Gaps = 2/31 (6%)
Query: 220 IRCDC--YDLYGGEKFATLSELVQFYMENQG 248
I + F L +LV+ Y +
Sbjct: 59 IMYHASKLSIDEEVYFENLMQLVEHYTSDAD 89
>2hdv_A SH2-B PH domain containing signaling mediator 1 gamma isoform;
adapter protein, signaling protein; 2.00A {Mus musculus}
PDB: 2hdx_A* 1rpy_A 1rqq_C*
Length = 111
Score = 120 bits (304), Expect = 8e-33
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 248 GKEAEQLILQ--KGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQ 305
+A QL+L+ G +G FLVR+S+++ G+ VL+ K H+ + A
Sbjct: 18 RLKAAQLVLEGGTGSHGVFLVRQSETRRGECVLTFNFQGKAKHLRLSLNAAGQCRVQHLH 77
Query: 306 FDSLTQLIEHYKRNPMVETSG--TVVHLKQP 334
F S+ ++EH++ +P+ SG + V L
Sbjct: 78 FQSIFDMLEHFRVHPIPLESGGSSDVVLVSY 108
Score = 32.7 bits (75), Expect = 0.095
Identities = 1/25 (4%), Positives = 9/25 (36%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQ 247
F ++ ++++ + +
Sbjct: 68 AGQCRVQHLHFQSIFDMLEHFRVHP 92
>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*
Length = 138
Score = 121 bits (306), Expect = 8e-33
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
AE + L +G+FLVR+ +F +S++ + +V H+ I Y + + F
Sbjct: 35 RAGAESI-LANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTAEGLYRITEKKAFR 93
Query: 308 SLTQLIEHYKRNPMVETS-GTVVHLKQPFN 336
LT+L+E Y++N + + L+ PF
Sbjct: 94 GLTELVEFYQQNSLKDCFKSLDTTLQFPFK 123
Score = 33.1 bits (76), Expect = 0.086
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 225 YDLYGGEKFATLSELVQFYMEN 246
Y + + F L+ELV+FY +N
Sbjct: 84 YRITEKKAFRGLTELVEFYQQN 105
>3ov1_A Growth factor receptor-bound protein 2; GRB2 SH2 domain,
phosphotyrosine binding, signaling protein, signaling
protein-antagonist complex; HET: PTR; 1.60A {Homo
sapiens} PDB: 3imj_A* 3in7_A* 3imd_A* 3kfj_A* 3n8m_A*
3in8_A* 3s8l_A* 3s8n_A* 3s8o_A* 2huy_A* 2h5k_A* 2huw_A*
2h46_E* 3c7i_A* 3n84_A* 1fhs_A 1bm2_A* 1bmb_A* 3ove_A*
1fyr_A* ...
Length = 117
Score = 120 bits (304), Expect = 1e-32
Identities = 22/87 (25%), Positives = 46/87 (52%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H + +F+
Sbjct: 15 RAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFN 74
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQP 334
SL +L+++++ + + +
Sbjct: 75 SLNELVDYHRSTSVSRNQQIFLRDIEQ 101
Score = 34.6 bits (80), Expect = 0.018
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQGKEAEQLIL 256
KF +L+ELV ++ +Q+ L
Sbjct: 63 AGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFL 96
>3us4_A Megakaryocyte-associated tyrosine-protein kinase; SH2 domain,
signaling protein, structural genomics, joint CE
structural genomics, JCSG; 1.50A {Homo sapiens} PDB:
1jwo_A
Length = 98
Score = 119 bits (301), Expect = 2e-32
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
G+EA Q LQ ++G FLVRES PGD+VL V V H + + + F
Sbjct: 14 GQEAVQQ-LQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFC 72
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQP 334
+L ++EHY ++ L +P
Sbjct: 73 NLMDMVEHYSKDKG----AICTKLVRP 95
Score = 33.3 bits (77), Expect = 0.036
Identities = 5/26 (19%), Positives = 12/26 (46%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQG 248
+ F L ++V+ Y +++G
Sbjct: 61 GHLTIDEAVFFCNLMDMVEHYSKDKG 86
>1jyr_A Growth factor receptor-bound protein 2; receptor binding,
regulatory, inhibitor, signaling protein-I complex; HET:
PTR; 1.55A {Homo sapiens} SCOP: d.93.1.1 PDB: 1jyq_A*
1jyu_A 1qg1_E* 1x0n_A* 2aob_A* 2aoa_A* 3n7y_A* 1tze_E*
1zfp_E* 3mxc_A* 3mxy_A* 1cj1_A*
Length = 96
Score = 119 bits (300), Expect = 2e-32
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H + +F+
Sbjct: 12 RAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFN 71
Query: 308 SLTQLIEHYKRNPMVETSG 326
SL +L+++++ +
Sbjct: 72 SLNELVDYHRSTSVSRNQQ 90
Score = 38.7 bits (91), Expect = 4e-04
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQGKEAEQLILQ 257
KF +L+ELV ++ +Q+ L+
Sbjct: 60 AGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLR 94
>1r1p_A GRB2-related adaptor protein 2; SH2, GADS, phosphopeptide, peptide
binding protein; HET: PTR; 1.80A {Mus musculus} SCOP:
d.93.1.1 PDB: 1r1q_A* 1r1s_A*
Length = 100
Score = 118 bits (297), Expect = 7e-32
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
+AE L L G F++R SQS PGDF +SVR +D V H + + E+F
Sbjct: 18 RHQAENL-LMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFLWTEKFP 76
Query: 308 SLTQLIEHYKRNPMVETSGTV 328
SL +L+++Y+ + +
Sbjct: 77 SLNKLVDYYRTTSISKQKQVF 97
Score = 37.6 bits (88), Expect = 0.001
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQGKEAEQLILQ 257
EKF +L++LV +Y + +Q+ L+
Sbjct: 65 KGNYFLWTEKFPSLNKLVDYYRTTSISKQKQVFLR 99
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5-
triphosphate, wortmannin, H1047R, ATP-binding, disease
mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB:
3hiz_B 2rd0_B 4a55_B* 3mtt_A
Length = 373
Score = 126 bits (316), Expect = 9e-32
Identities = 39/236 (16%), Positives = 85/236 (36%), Gaps = 14/236 (5%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSK-PGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQF 306
+E + L+ +G+FLVR++ +K GD+ L++R + I + KY F
Sbjct: 19 REEVNEK-LRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTF 77
Query: 307 DSLTQLIEHYKRNPMVETSGTV-VHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEE 365
S+ +LI HY+ + + + + V L P + + D + + K+ E
Sbjct: 78 SSVVELINHYRNESLAQYNPKLDVKLLYPVSKYQQDQVVKEDNIEAVGKK------LHEY 131
Query: 366 FESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVP--GAEYINAN 423
Q++ + E + + + I F+ T ++ + EYI
Sbjct: 132 NTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKF 191
Query: 424 YIQSEDGGKSYIATQGCLPSTMNDF---WSMVWQENVRVIVMTTKEMERGKNKCAK 476
+ + I + +E+++ +E+++ N
Sbjct: 192 KREGNEKEIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKP 247
Score = 70.2 bits (171), Expect = 4e-13
Identities = 45/220 (20%), Positives = 76/220 (34%), Gaps = 17/220 (7%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFK 154
I + +Q + R G I I+ K +I + +
Sbjct: 169 TIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMHNYDKLK-SRISEIIDSRRRLEED 227
Query: 155 LKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRLIEEQKSIQLG 214
LK + P++ + +T QY + L++ L E Q
Sbjct: 228 LKKQAAEYREIDKRMNSIKPDLIQLRKTRDQYLMWLTQKGVRQKKLNEWLGNENTEDQ-- 285
Query: 215 REYTNIRCDCYDLYGGEKFATLSELVQFYMEN-QGKEAEQLILQKGKNGSFLVRESQSKP 273
Y L ++ + + + + +AE L L+ ++G+FLVRES SK
Sbjct: 286 ----------YSLVEDDEDLPHHDEKTWNVGSSNRNKAENL-LRGKRDGTFLVRES-SKQ 333
Query: 274 GDFVLSVRTDDKVTHVMIRCQAEKYD-VGGGEQFDSLTQL 312
G + SV D +V H +I A Y + SL +L
Sbjct: 334 GCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYSSLKEL 373
Score = 29.0 bits (64), Expect = 4.5
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 225 YDLYGGEKFATLSELVQFYMEN 246
Y F+++ EL+ Y
Sbjct: 69 YGFSDPLTFSSVVELINHYRNE 90
>2ysx_A Signaling inositol polyphosphate phosphatase SHIP II; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 119
Score = 117 bits (296), Expect = 1e-31
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGE-- 304
+AE+L+ + GK+GSFLVR S+S + L V + V I + K+ V E
Sbjct: 19 RSKAEELLSRTGKDGSFLVRASESISRAYALCVLYRNCVYTYRILPNEDDKFTVQASEGV 78
Query: 305 ---QFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
F L QLIE YK+ M G V HL+ P
Sbjct: 79 SMRFFTKLDQLIEFYKKENM----GLVTHLQYP 107
Score = 29.2 bits (66), Expect = 1.4
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 5/31 (16%)
Query: 223 DCYDLYGGEK-----FATLSELVQFYMENQG 248
D + + E F L +L++FY +
Sbjct: 68 DKFTVQASEGVSMRFFTKLDQLIEFYKKENM 98
>2ge9_A Tyrosine-protein kinase BTK; SH2 domain, structure, transferase;
NMR {Homo sapiens}
Length = 125
Score = 117 bits (296), Expect = 2e-31
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDD------KVTHVMIRCQAE-KYDV 300
+AEQL+ Q+GK G F+VR+S SK G + +SV + H ++ + +Y +
Sbjct: 20 RSQAEQLLKQEGKEGGFIVRDS-SKAGKYTVSVFAKSTGDPQGVIRHYVVCSTPQSQYYL 78
Query: 301 GGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTE 351
F ++ +LI +++ N G + LK P + + H
Sbjct: 79 AEKHLFSTIPELINYHQHNSA----GLISRLKYPVSQQNKNAPSTHHHHHH 125
Score = 33.5 bits (77), Expect = 0.051
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 220 IRCDC---YDLYGGEKFATLSELVQFYMENQG 248
+ Y L F+T+ EL+ ++ N
Sbjct: 68 VCSTPQSQYYLAEKHLFSTIPELINYHQHNSA 99
>1i3z_A EWS/FLI1 activated transcript 2; SH2 domain phosphotyrosine signal
transduction lymphocyte, signaling protein; HET: PTR;
2.15A {Mus musculus} SCOP: d.93.1.1
Length = 103
Score = 116 bits (292), Expect = 3e-31
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGE-- 304
+E E L+L+ G +G+FL+R+S+S PG L V V I + Y +
Sbjct: 12 KRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGYYRIETDAHT 71
Query: 305 ---QFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 336
F +L +L+ Y + G VVHL P
Sbjct: 72 PRTIFPNLQELVSKYGKPGQ----GLVVHLSNPIM 102
Score = 28.4 bits (64), Expect = 2.1
Identities = 6/23 (26%), Positives = 7/23 (30%)
Query: 226 DLYGGEKFATLSELVQFYMENQG 248
F L ELV Y +
Sbjct: 69 AHTPRTIFPNLQELVSKYGKPGQ 91
>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 111
Score = 113 bits (285), Expect = 3e-30
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
+EA+ LQ ++G FLVR+S + PGD+VLSV + +V+H +I + G ++FD
Sbjct: 29 QEAQTR-LQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDH 87
Query: 309 LTQLIEHYKRNPMVETSGTVVHLKQP 334
L L+E YK + + T+ L +P
Sbjct: 88 LPALLEFYKIHYLDTTT-----LIEP 108
Score = 32.2 bits (74), Expect = 0.13
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 222 CDCYDLYGGEKFATLSELVQFYMEN 246
+ G ++F L L++FY +
Sbjct: 74 PNRRFKIGDQEFDHLPALLEFYKIH 98
>3k2m_A Proto-oncogene tyrosine-protein kinase ABL1; engineered binding
protein, antibody mimic, protein-protein SH2 domain,
ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB:
3uyo_A 3t04_A 1ab2_A
Length = 112
Score = 113 bits (285), Expect = 3e-30
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFD 307
AE L L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F+
Sbjct: 15 NAAEYL-LSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFN 73
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQP 334
+L +L+ H+ G + L P
Sbjct: 74 TLAELVHHHSTVAD----GLITTLHYP 96
Score = 33.3 bits (77), Expect = 0.055
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
+ +F TL+ELV +
Sbjct: 64 LYVSSESRFNTLAELVHHHSTVAD 87
>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 121
Score = 113 bits (286), Expect = 4e-30
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 306
+AE+ +L + G+FL+RES+S+ GDF LSV + V H IR E + + + F
Sbjct: 26 ADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKVF 85
Query: 307 DSLTQLIEHYKRNPMVETSGTVVHLKQP 334
+L + + +Y G V L++P
Sbjct: 86 STLNEFVNYYTTTS----DGLCVKLEKP 109
Score = 34.2 bits (79), Expect = 0.027
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
+ L + F+TL+E V +Y
Sbjct: 77 FFLTRRKVFSTLNEFVNYYTTTSD 100
>3gqi_B Phospholipase C-gamma-1; phosphorylated kinase, PY-recognition,
tandem SH2 domains, A analog, ATP-binding,
craniosynostosis, disease mutation; HET: PTR DVT ACP;
2.50A {Rattus norvegicus} PDB: 2fci_A* 2pld_A* 2ple_A*
Length = 226
Score = 117 bits (294), Expect = 4e-30
Identities = 30/150 (20%), Positives = 63/150 (42%), Gaps = 37/150 (24%)
Query: 222 CDCYDLYGGEKFATLSELVQFYMENQ-------------------------------GKE 250
+ L F +L +L+ Y + +
Sbjct: 74 TPKFFLTDNLVFDSLYDLITHYQQVPLRCNEFEMRLSEPVPQTNAHESKEWYHASLTRAQ 133
Query: 251 AEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLT 310
AE ++++ ++G+FLVR+ ++P + +S R + K+ H ++ Q + + G +FDSL
Sbjct: 134 AEHMLMRVPRDGAFLVRKR-NEPNSYAISFRAEGKIKHCRVQ-QEGQTVMLGNSEFDSLV 191
Query: 311 QLIEHYKRNPMVETSGTVVHLKQPFNATRI 340
LI +Y+++P+ + L+ P N +
Sbjct: 192 DLISYYEKHPL----YRKMKLRYPINEEAL 217
Score = 82.3 bits (203), Expect = 7e-18
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 249 KEAEQLILQ-----KGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIR----CQAEKYD 299
AE+L+ + +GSFLVRES++ GD+ LS + KV H I K+
Sbjct: 19 HIAERLLTEYCIETGAPDGSFLVRESETFVGDYTLSFWRNGKVQHCRIHSRQDAGTPKFF 78
Query: 300 VGGGEQFDSLTQLIEHYKRNPM 321
+ FDSL LI HY++ P+
Sbjct: 79 LTDNLVFDSLYDLITHYQQVPL 100
Score = 33.7 bits (77), Expect = 0.10
Identities = 6/36 (16%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 220 IRCDC-YDLYGGEKFATLSELVQFYMENQGKEAEQL 254
++ + + G +F +L +L+ +Y ++ +L
Sbjct: 173 VQQEGQTVMLGNSEFDSLVDLISYYEKHPLYRKMKL 208
>1mil_A SHC adaptor protein; SH2 domain, phosphorylation, collagen, growth
regulation, transforming protein, alternative
initiation; 2.70A {Homo sapiens} SCOP: d.93.1.1 PDB:
1tce_A*
Length = 104
Score = 113 bits (284), Expect = 4e-30
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
+EAE L+ NG FLVRES + PG +VL+ + H+++ +F+S
Sbjct: 17 REAEALLQL---NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRT-KDHRFES 72
Query: 309 LTQLIEHYKRNPM-VETSGTVVHLKQPFN 336
++ LI ++ N + + ++G+ + L+QP
Sbjct: 73 VSHLISYHMDNHLPIISAGSELCLQQPVE 101
Score = 30.3 bits (69), Expect = 0.57
Identities = 8/33 (24%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 229 GGEKFATLSELVQFYMENQ---GKEAEQLILQK 258
+F ++S L+ ++M+N +L LQ+
Sbjct: 66 KDHRFESVSHLISYHMDNHLPIISAGSELCLQQ 98
>2eob_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 2;
SH2, phosphoinositide phospholipase C, PLC-gamma-2,
phospholipase C-gamma-2; NMR {Rattus norvegicus}
Length = 124
Score = 113 bits (285), Expect = 5e-30
Identities = 20/99 (20%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
EAE ++++ ++G+FL+R+ + + ++ R KV H I + +G F+
Sbjct: 28 RGEAEDMLMRIPRDGAFLIRKREG-TDSYAITFRARGKVKHCRINRDGRHFVLGTSAYFE 86
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIH 346
SL +L+ +Y+++ + + L+ P + +
Sbjct: 87 SLVELVSYYEKHAL----YRKMRLRYPVTPELLERYSGP 121
Score = 35.3 bits (82), Expect = 0.014
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 220 IRCD--CYDLYGGEKFATLSELVQFYMENQGKEAEQL 254
I D + L F +L ELV +Y ++ +L
Sbjct: 70 INRDGRHFVLGTSAYFESLVELVSYYEKHALYRKMRL 106
>1rja_A Tyrosine-protein kinase 6; human protein tyrosine kinase-6
(PTK6/BRK), SRC homology 2(S domain, solution structure,
backbone dynamics, transferase; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 100
Score = 112 bits (283), Expect = 5e-30
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 306
EA + + +G G+FL+R S+ D+VLSVR V H I +A + + F
Sbjct: 12 SEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSF 71
Query: 307 DSLTQLIEHYKRNPMVETSGTVVHLKQP 334
SL +L+ +++ + + L P
Sbjct: 72 LSLPELVNYHRAQSL----SHGLRLAAP 95
Score = 34.5 bits (80), Expect = 0.017
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 225 YDLYGGEKFATLSELVQFYMENQGKEAEQL 254
L F +L ELV ++ +L
Sbjct: 63 LHLNEAVSFLSLPELVNYHRAQSLSHGLRL 92
>2kk6_A Proto-oncogene tyrosine-protein kinase FER; methods development,
SH2, NESG, ATP-binding, cytoplasm, nucleotide-binding,
nucleus, phosphoprotein; NMR {Homo sapiens}
Length = 116
Score = 113 bits (284), Expect = 6e-30
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
EA++L+ + G FLVRES KPG++VLSV +D + H +I+ Y G F +
Sbjct: 27 IEAQELLKK---QGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQYVDNMYRF-EGTGFSN 82
Query: 309 LTQLIEHYKRNPMVETSGTVVHLKQP 334
+ QLI+H+ V T + V L P
Sbjct: 83 IPQLIDHHYTTKQVITKKSGVVLLNP 108
Score = 31.5 bits (72), Expect = 0.23
Identities = 4/32 (12%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 229 GGEKFATLSELVQFYMENQG--KEAEQLILQK 258
G F+ + +L+ + + + ++L
Sbjct: 76 EGTGFSNIPQLIDHHYTTKQVITKKSGVVLLN 107
>3pqz_A Growth factor receptor-bound protein 7; SH2, binds phosphotyrosine,
tyrosine kinases, cytoplasmic, P binding; 2.41A {Homo
sapiens} PDB: 1mw4_A* 2l4k_A* 2qms_A
Length = 117
Score = 112 bits (283), Expect = 7e-30
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDV-----GG 302
+E+++LI Q+G +G FLVRESQ P FVLS+ KV H +I E+ + G
Sbjct: 24 EESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEEGRLYFSMDDG 83
Query: 303 GEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 336
+F L QL+E ++ N L+
Sbjct: 84 QTRFTDLLQLVEFHQLNRG----ILPCLLRHCCT 113
Score = 33.8 bits (78), Expect = 0.041
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 229 GGEKFATLSELVQFYMENQG 248
G +F L +LV+F+ N+G
Sbjct: 83 GQTRFTDLLQLVEFHQLNRG 102
>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding
domain, protein tyrosine kinase, signal transduction,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 119
Score = 112 bits (283), Expect = 8e-30
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFD 307
AE L L NGSFLVRES+S PG +S+R + +V H I A+ K V +F
Sbjct: 26 SAAEYL-LSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTADGKVYVTAESRFS 84
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQP 334
+L +L+ H+ G V L P
Sbjct: 85 TLAELVHHHSTVAD----GLVTTLHYP 107
Score = 33.0 bits (76), Expect = 0.064
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
+ +F+TL+ELV +
Sbjct: 75 VYVTAESRFSTLAELVHHHSTVAD 98
>2ekx_A Cytoplasmic tyrosine-protein kinase BMX; SH2 domain,
phosphotyrosine binding domain, protein tyrosine kinase,
signal transduction; NMR {Homo sapiens}
Length = 110
Score = 112 bits (282), Expect = 8e-30
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDD------KVTHVMIRCQAE-KYDV 300
++EQL+ QKGK G+F+VR S S+ G + +S+ + V H + AE K +
Sbjct: 20 RSQSEQLLRQKGKEGAFMVRNS-SQVGMYTVSLFSKAVNDKKGTVKHYHVHTNAENKLYL 78
Query: 301 GGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 336
FDS+ +LI +++ N +G + L+ P +
Sbjct: 79 AENYCFDSIPKLIHYHQHNS----AGMITRLRHPVS 110
Score = 33.0 bits (76), Expect = 0.058
Identities = 4/22 (18%), Positives = 10/22 (45%)
Query: 225 YDLYGGEKFATLSELVQFYMEN 246
L F ++ +L+ ++ N
Sbjct: 76 LYLAENYCFDSIPKLIHYHQHN 97
>2dm0_A Tyrosine-protein kinase TXK; TEC family kinase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 125
Score = 111 bits (280), Expect = 3e-29
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRT------DDKVTHVMIRCQAE-KYDV 300
+AE L+ Q+ K G+F+VR+S G + +SV + + H I+ ++ V
Sbjct: 25 RNQAEHLLRQESKEGAFIVRDS-RHLGSYTISVFMGARRSTEAAIKHYQIKKNDSGQWYV 83
Query: 301 GGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
F S+ +LI +++ N G + L+ P
Sbjct: 84 AERHAFQSIPELIWYHQHNAA----GLMTRLRYP 113
Score = 34.2 bits (79), Expect = 0.032
Identities = 4/24 (16%), Positives = 11/24 (45%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
+ + F ++ EL+ ++ N
Sbjct: 81 WYVAERHAFQSIPELIWYHQHNAA 104
>1d4t_A T cell signal transduction molecule SAP; SH2 domain, tyrosine
kinase, signal transduction, peptide recognition,
signaling protein; 1.10A {Homo sapiens} SCOP: d.93.1.1
PDB: 1d1z_A 1d4w_A* 1m27_A*
Length = 104
Score = 109 bits (274), Expect = 8e-29
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGG---- 303
+ E+L+L G +GS+L+R+S+S PG + L V + + +
Sbjct: 14 ETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVH 73
Query: 304 -EQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
F + LI +++ G V+ L+ P
Sbjct: 74 KRYFRKIKNLISAFQKPDQ----GIVIPLQYP 101
Score = 28.8 bits (65), Expect = 1.5
Identities = 2/26 (7%), Positives = 7/26 (26%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQG 248
+ F + L+ + +
Sbjct: 67 ETAPGVHKRYFRKIKNLISAFQKPDQ 92
>1nrv_A Growth factor receptor-bound protein 10; dimer, signaling protein;
1.65A {Homo sapiens} SCOP: d.93.1.1 PDB: 3m7f_A
Length = 105
Score = 109 bits (274), Expect = 1e-28
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 248 GKEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDV-----G 301
+E+ ++I Q+G +G FL+R+SQS P FVL++ K+ + I +
Sbjct: 14 REESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDDGQTFFSLDD 73
Query: 302 GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
G +F L QL++ Y+ N LK
Sbjct: 74 GNTKFSDLIQLVDFYQLNKG----VLPCKLKHH 102
Score = 32.6 bits (75), Expect = 0.073
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 229 GGEKFATLSELVQFYMENQG 248
G KF+ L +LV FY N+G
Sbjct: 74 GNTKFSDLIQLVDFYQLNKG 93
>1ju5_A CRK; CRK, SH2, SH3, adaptor protein, phosphopeptide, protein
binding/transferase complex; HET: PTR; NMR {Homo
sapiens} SCOP: d.93.1.1
Length = 109
Score = 109 bits (273), Expect = 1e-28
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 23/105 (21%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG------- 301
+EA L LQ ++G FLVR+S + PGD+VLSV + +V+H +I + V
Sbjct: 10 QEAVAL-LQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPP 68
Query: 302 ----------GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFN 336
G ++FDSL L+E YK + + T L +P +
Sbjct: 69 PGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTT-----TLIEPVS 108
Score = 36.4 bits (84), Expect = 0.005
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Query: 193 VQHY-IQTLSQRLIEEQKSIQLGREYTNIRCDCYDLYGGEKFATLSELVQFYMENQGKEA 251
V HY I + R Q + R G ++F +L L++FY +
Sbjct: 46 VSHYIINSSGPRPPVPPSPAQPPPGVSPSRLRI----GDQEFDSLPALLEFYKIHYLDTT 101
>2iug_A Phosphatidylinositol 3-kinase regulatory alpha subunit;
transferase, polymorphism, UBL conjugation,
phosphorylation, SH2, PI3K, SH2 domain; 1.89A {Homo
sapiens} PDB: 2iuh_A* 2iui_A* 1fu5_A* 1fu6_A 1oo3_A
1oo4_A* 2pna_A 2pnb_A
Length = 120
Score = 108 bits (273), Expect = 2e-28
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSK-PGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQF 306
+E + L+ +G+FLVR++ +K GD+ L++R + I + KY F
Sbjct: 20 REEVNEK-LRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTF 78
Query: 307 DSLTQLIEHYKRNPMVETS-GTVVHLKQPFN 336
S+ +LI HY+ + + + V L P +
Sbjct: 79 SSVVELINHYRNESLAQYNPKLDVKLLYPVS 109
Score = 30.0 bits (68), Expect = 0.90
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 225 YDLYGGEKFATLSELVQFYMEN 246
Y F+++ EL+ Y
Sbjct: 70 YGFSDPLTFSSVVELINHYRNE 91
>1h9o_A Phosphatidylinositol 3-kinase; transferase/receptor, complex
(phosphotransferase/receptor), phosphotransferase, SH2
domain; HET: PTR; 1.79A {Homo sapiens} SCOP: d.93.1.1
PDB: 1pic_A* 1bfi_A 1bfj_A 1qad_A
Length = 112
Score = 108 bits (272), Expect = 2e-28
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFD 307
+AE L L+ ++G+FLVRES SK G + SV D +V H +I A +
Sbjct: 20 NKAENL-LRGKRDGTFLVRES-SKQGCYACSVVVDGEVKHCVINKTATGYGFAEPYNLYS 77
Query: 308 SLTQLIEHYKRNPMVETS-GTVVHLKQPFNATR 339
SL +L+ HY+ +V+ + V L P A +
Sbjct: 78 SLKELVLHYQHTSLVQHNDSLNVTLAYPVYAQQ 110
Score = 30.3 bits (69), Expect = 0.61
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 225 YDLYGGEKFATLSELVQFYMEN 246
+++L ELV Y
Sbjct: 68 GFAEPYNLYSSLKELVLHYQHT 89
>2cs0_A Hematopoietic SH2 domain containing; ALX, FLJ14886, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
d.93.1.1
Length = 119
Score = 108 bits (272), Expect = 2e-28
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQ--F 306
++AE L L+ GSFL+R S S G + LS + H M++ + + GE+
Sbjct: 26 EDAENL-LESQPLGSFLIRVSHSHVG-YTLSYKAQSSCCHFMVKLLDDGTFMIPGEKVAH 83
Query: 307 DSLTQLIEHYKRNPMVETSGTVVHLKQP 334
SL L+ +++ P+ L QP
Sbjct: 84 TSLDALVTFHQQKPI---EPRRELLTQP 108
Score = 29.2 bits (66), Expect = 1.4
Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 223 DCYDLYGGEK--FATLSELVQFYMENQGKEAEQLILQ 257
D + GEK +L LV F+ + + +L+ Q
Sbjct: 71 DGTFMIPGEKVAHTSLDALVTFHQQKPIEPRRELLTQ 107
>1ka6_A SH2 domain protein 1A; SH2 domain, protein-peptide complex, immune
system; HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB:
1ka7_A
Length = 128
Score = 108 bits (272), Expect = 3e-28
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 10/99 (10%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGG---- 303
+ E+L+L G +GS+L+R+S+S PG + L V + + +
Sbjct: 14 ETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGSWSAETAPGVH 73
Query: 304 -EQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRIT 341
F + LI +++ G V+ L+ P
Sbjct: 74 KRYFRKIKNLISAFQKPDQ----GIVIPLQYPVEKKSSA 108
Score = 28.5 bits (64), Expect = 2.7
Identities = 2/20 (10%), Positives = 6/20 (30%)
Query: 229 GGEKFATLSELVQFYMENQG 248
F + L+ + +
Sbjct: 73 HKRYFRKIKNLISAFQKPDQ 92
>1lkk_A Human P56 tyrosine kinase; complex (tyrosine kinase/peptide); HET:
PTR; 1.00A {Homo sapiens} SCOP: d.93.1.1 PDB: 1lcj_A*
1bhf_A* 1bhh_A 1lkl_A* 1bhh_B 1fbz_A* 1ijr_A* 1cwd_L*
1cwe_A*
Length = 105
Score = 107 bits (269), Expect = 5e-28
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDK-----VTHVMIRCQAE-KYDVG 301
K+AE+ +L G +GSFL+RES+S G F LSVR D+ V H IR + +
Sbjct: 14 KDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYIS 73
Query: 302 GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
F L +L+ HY G L +P
Sbjct: 74 PRITFPGLHELVRHYTNASD----GLCTRLSRP 102
Score = 35.0 bits (81), Expect = 0.011
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
+ + F L ELV+ Y
Sbjct: 70 FYISPRITFPGLHELVRHYTNASD 93
>1aot_F FYN protein-tyrosine kinase; SH2 domain, signal transduction,
peptide complex, complex (proto-oncogene/early protein);
HET: PTR; NMR {Homo sapiens} SCOP: d.93.1.1 PDB: 1aou_F*
Length = 106
Score = 106 bits (268), Expect = 6e-28
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 248 GKEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRT-----DDKVTHVMIRCQAE-KYDV 300
K+AE+ +L G G+FL+RES++ G + LS+R D V H IR Y +
Sbjct: 14 RKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYI 73
Query: 301 GGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
QF++L QL++HY G L P
Sbjct: 74 TTRAQFETLQQLVQHYSERAA----GLSSRLVVP 103
Score = 33.8 bits (78), Expect = 0.034
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
Y + +F TL +LVQ Y E
Sbjct: 71 YYITTRAQFETLQQLVQHYSERAA 94
>2dx0_A Phospholipase C, gamma 2; phosphoric diester hydrolase, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; 2.50A {Mus musculus}
Length = 138
Score = 107 bits (269), Expect = 9e-28
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 249 KEAEQLILQK-----GKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE----KYD 299
AE+L+ + K+G+FLVRES++ P D+ LS +V H IR E KY
Sbjct: 33 TSAEKLLQEYCAETGAKDGTFLVRESETFPNDYTLSFWRSGRVQHCRIRSTMENGVMKYY 92
Query: 300 VGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
+ F+S+ LI+HY+ + + + L P
Sbjct: 93 LTDNLTFNSIYALIQHYREAHLR-CAEFELRLTDP 126
Score = 36.7 bits (85), Expect = 0.005
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 222 CDCYDLYGGEKFATLSELVQFYMENQGKEAE 252
Y L F ++ L+Q Y E + AE
Sbjct: 88 VMKYYLTDNLTFNSIYALIQHYREAHLRCAE 118
>2aug_A Growth factor receptor-bound protein 14; phosphorylation, SH2
domain, signaling protein; 2.30A {Homo sapiens}
Length = 126
Score = 105 bits (265), Expect = 2e-27
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYD-----VGG 302
EA++LI+Q+G +G FLVR+SQS P FVLS+ K+ H I + + G
Sbjct: 36 DEAQRLIIQQGLVDGVFLVRDSQSNPKTFVLSMSHGQKIKHFQIIPVEDDGEMFHTLDDG 95
Query: 303 GEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
+F L QL+E Y+ N LK
Sbjct: 96 HTRFTDLIQLVEFYQLNKG----VLPCKLKHY 123
Score = 33.1 bits (76), Expect = 0.087
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 229 GGEKFATLSELVQFYMENQG 248
G +F L +LV+FY N+G
Sbjct: 95 GHTRFTDLIQLVEFYQLNKG 114
>1blj_A P55 BLK protein tyrosine kinase; signal transduction, transferase,
phosphotransferase, phosphorylation; NMR {Mus musculus}
SCOP: d.93.1.1 PDB: 1blk_A
Length = 114
Score = 102 bits (257), Expect = 2e-26
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 249 KEAEQLIL-QKGKNGSFLVRESQSKPGDFVLSVRTD----DKVTHVMIRCQAE-KYDVGG 302
K+AE+ +L K GSFL+RES+S G F LSV+ + V H IR Y +
Sbjct: 22 KDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLDNGGYYISP 81
Query: 303 GEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
F +L L++HY + G L P
Sbjct: 82 RITFPTLQALVQHYSKKG----DGLCQKLTLP 109
Score = 35.4 bits (82), Expect = 0.011
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
Y + F TL LVQ Y +
Sbjct: 77 YYISPRITFPTLQALVQHYSKKGD 100
>2oq1_A Tyrosine-protein kinase ZAP-70; tandem SH2 domains, ZAP-70,
tyrosine kinase, transferase; HET: PTR; 1.90A {Homo
sapiens} SCOP: d.93.1.1 d.93.1.1 PDB: 1m61_A
Length = 254
Score = 106 bits (265), Expect = 5e-26
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 306
+EAE+ + +G FL+R + G + LS+ V H +I KY + G +F
Sbjct: 169 EEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKF 227
Query: 307 DSLTQLIEHYKRNPMVETSGTVVHLKQP 334
D+L QL+E+ K G + LK+
Sbjct: 228 DTLWQLVEYLKLKAD----GLIYCLKEA 251
Score = 98.4 bits (245), Expect = 3e-23
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 306
EAE+ + G +G FL+R+ G +VLS+ D + H I Q Y + GG+
Sbjct: 16 AEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAH 75
Query: 307 DSLTQLIEHYKRNP 320
+L E Y R+P
Sbjct: 76 CGPAELCEFYSRDP 89
Score = 36.0 bits (83), Expect = 0.023
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 225 YDLYGGEKFATLSELVQFYMENQGKEAEQL 254
Y + GG+ +EL +FY + L
Sbjct: 67 YAIAGGKAHCGPAELCEFYSRDPDGLPCNL 96
Score = 33.7 bits (77), Expect = 0.13
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
Y + G KF TL +LV++
Sbjct: 219 YCIPEGTKFDTLWQLVEYLKLKAD 242
>1a81_A SYK kinase; complex (transferase-peptide), SYK, kinase, SH2 domain;
HET: PTR; 3.00A {Homo sapiens} SCOP: d.93.1.1 d.93.1.1
PDB: 1csy_A* 1csz_A*
Length = 254
Score = 106 bits (265), Expect = 6e-26
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 249 KEAEQLILQKGK-NGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 306
+E+EQ++L K NG FL+R + G + L + + KV H I K + G++F
Sbjct: 168 EESEQIVLIGSKTNGKFLIRARDN-NGSYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKF 226
Query: 307 DSLTQLIEHYKRNPMVETSGTVVHLKQP 334
D+L QL+EHY G + L P
Sbjct: 227 DTLWQLVEHYSYKAD----GLLRVLTVP 250
Score = 99.2 bits (247), Expect = 1e-23
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 306
+EAE ++Q G +G +L+R+S++ G F LSV K H I + Y + GG
Sbjct: 15 EEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNGTYAIAGGRTH 74
Query: 307 DSLTQLIEHYKRNPMVETSGTVVHLKQPF 335
S L ++ + G V LK+PF
Sbjct: 75 ASPADLCHYHSQESD----GLVCLLKKPF 99
Score = 34.9 bits (80), Expect = 0.053
Identities = 5/24 (20%), Positives = 12/24 (50%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
Y + GG A+ ++L ++ +
Sbjct: 66 YAIAGGRTHASPADLCHYHSQESD 89
Score = 33.7 bits (77), Expect = 0.14
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
+ G+KF TL +LV+ Y
Sbjct: 218 LSIPEGKKFDTLWQLVEHYSYKAD 241
>3s9k_A Tyrosine-protein kinase ITK/TSK; proline isomerization, CIS
proline, domain swapped dimer, SH transferase; HET: CIT;
2.35A {Mus musculus} PDB: 2etz_A* 2eu0_A* 1lui_A 1luk_A
1lum_A 1lun_A 2k79_B 2k7a_B
Length = 118
Score = 101 bits (253), Expect = 8e-26
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 14/95 (14%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDK------VTHVMIRCQAE---KYD 299
+AE+L+L GK G+F+VR+S++ PG + +SV T + H I+ + +Y
Sbjct: 19 DKAEKLLLDTGKEGAFMVRDSRT-PGTYTVSVFTKAIISENPCIKHYHIKETNDSPKRYY 77
Query: 300 VGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
V FDS+ LI++++ N G V L+ P
Sbjct: 78 VAEKYVFDSIPLLIQYHQYNGG----GLVTRLRYP 108
Score = 34.3 bits (79), Expect = 0.024
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 225 YDLYGGEKFATLSELVQFYMENQG 248
Y + F ++ L+Q++ N G
Sbjct: 76 YYVAEKYVFDSIPLLIQYHQYNGG 99
>2c9w_A Suppressor of cytokine signaling 2; growth regulation, SH2 domain,
signal transduction inhibitor nuclear protein; 1.9A
{Homo sapiens} SCOP: a.271.1.1 d.93.1.1
Length = 169
Score = 102 bits (256), Expect = 2e-25
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGG---- 303
EA++ L++ G+FL+R+S +SV+T T++ I Q K+ +
Sbjct: 26 VNEAKEK-LKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGKFRLDSIICVK 84
Query: 304 ---EQFDSLTQLIEHYKRN-------PMVETSGTV-VHLKQPFNAT--------RITVSN 344
+QFDS+ LI++Y + P +GTV ++L +P + R+T++
Sbjct: 85 SKLKQFDSVVHLIDYYVQMCKDKRTGPEAPRNGTVHLYLTKPLYTSAPSLQHLCRLTINK 144
Query: 345 IHDRVTELQ 353
+ L
Sbjct: 145 CTGAIWGLP 153
>2eo6_A B-cell linker protein; SH2, cytoplasmic adapter protein, B-cell
adapter containing SH2 domain protein; NMR {Mus
musculus}
Length = 141
Score = 98.4 bits (245), Expect = 2e-24
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGD--FVLSVRTDDKVTHVMIRCQAE--KYDVG--- 301
K AE+ + + K+GSFL+R+S + L + +V ++ +R +Y +G
Sbjct: 33 KSAEEALHRSNKDGSFLIRKSSGHDSKQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKK 92
Query: 302 -GGEQFDSLTQLIEHYKRNPMV-----ETSGTVVHLKQPFNAT 338
G E F S+ +++ ++ NP+V + LK +
Sbjct: 93 NGEEYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVS 135
>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase,
phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus
musculus}
Length = 302
Score = 102 bits (256), Expect = 2e-24
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFD 307
+AE++ L ++G+FL+RES S+ G + SV D H +I A +
Sbjct: 204 TQAEEM-LSGKRDGTFLIRES-SQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYG 261
Query: 308 SLTQLIEHYKRNPMVET-SGTVVHLKQPFNATR 339
SL +L+ HY+ +V+ V L P A
Sbjct: 262 SLKELVLHYQHASLVQHNDALTVTLAHPVRAPG 294
Score = 28.9 bits (64), Expect = 4.3
Identities = 5/22 (22%), Positives = 7/22 (31%)
Query: 225 YDLYGGEKFATLSELVQFYMEN 246
+ +L ELV Y
Sbjct: 252 GFAEPYNLYGSLKELVLHYQHA 273
>2vif_A Suppressor of cytokine signalling 6; growth regulation, signal
transduction inhibitor, KIT regula phosphotyrosine,
signaling protein; HET: PTR; 1.45A {Homo sapiens}
Length = 141
Score = 96.0 bits (239), Expect = 1e-23
Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG---GGE 304
EAE L +GSFLVR+S LS R+ K H I ++ E
Sbjct: 33 RWEAEGK-LANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVE 91
Query: 305 QFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQ 353
S+ LIEH + + ++N R +++
Sbjct: 92 GHTSIVDLIEHSIGDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVR 140
Score = 28.6 bits (64), Expect = 3.0
Identities = 10/53 (18%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 194 QHYIQTLSQRLIEEQKSIQLGREYTNIRCDCYDLYGGEKFATLSELVQFYMEN 246
Y+ +LS R + ++ E++N R Y+ E ++ +L++ + +
Sbjct: 56 DRYLLSLSFRSHGKTLHTRI--EHSNGRFSFYEQPDVEGHTSIVDLIEHSIGD 106
>1wqu_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; SH2 domain,
feline sarcoma oncogene, structural genomics; NMR {Homo
sapiens} PDB: 2dcr_A
Length = 114
Score = 92.8 bits (231), Expect = 8e-23
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
E +L++ +G FLVRESQ K ++VLSV D H +I+ Y + G E F S
Sbjct: 26 AEVAELLVH---SGDFLVRESQGK-QEYVLSVLWDGLPRHFIIQSLDNLYRLEG-EGFPS 80
Query: 309 LTQLIEHYKRN--PMVETSGTVVHLKQP 334
+ LI+H P+ + SG V+H P
Sbjct: 81 IPLLIDHLLSTQQPLTKKSGVVLHRAVP 108
Score = 30.8 bits (70), Expect = 0.36
Identities = 6/32 (18%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 229 GGEKFATLSELVQFYMENQG--KEAEQLILQK 258
GE F ++ L+ + Q + ++L +
Sbjct: 74 EGEGFPSIPLLIDHLLSTQQPLTKKSGVVLHR 105
>2bbu_A Suppressor of cytokine signaling 3; SH2 domain, extended SH2
subdomain, PEST motif, protein complex, cytokine
regulator; HET: PTR; NMR {Mus musculus}
Length = 164
Score = 93.5 bits (232), Expect = 2e-22
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGE--- 304
G EA L L G+FL+R+S + F LSV+T ++ I+C+ + +
Sbjct: 32 GGEANLL-LSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRST 90
Query: 305 ----QFDSLTQLIEHYKRNPM 321
+FD + +L+ HY P
Sbjct: 91 QPVPRFDCVLKLVHHYMPPPG 111
Score = 33.8 bits (77), Expect = 0.082
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 194 QHYIQTLSQRLIEEQKS--IQLGREYTNIRCDCYDLYGGEKFATLSELVQFYMENQGKEA 251
Q + TLS + K+ IQ +++ D +F + +LV YM G +
Sbjct: 55 QRHFFTLSVKTQSGTKNLRIQCEGGSFSLQSDPRSTQPVPRFDCVLKLVHHYMPPPGTPS 114
Query: 252 EQLILQKGKNGSFLVRESQSKPG 274
L + + +Q+ PG
Sbjct: 115 FSLPPTEPSSEVPEQPPAQALPG 137
>2izv_A Suppressor of cytokine signaling 4; signal transduction inhibitor,
growth regulation, signal transduction, SH2 domain,
nuclear protein; 2.55A {Homo sapiens} SCOP: a.271.1.1
d.93.1.1
Length = 187
Score = 92.6 bits (230), Expect = 7e-22
Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGE---- 304
AE L L+ G+FL+R+S + F +S R + H I + +
Sbjct: 44 YAAEAL-LEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHDPCVF 102
Query: 305 QFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATR 339
+T L+EHYK L P T
Sbjct: 103 HSPDITGLLEHYKDPSACMFFEP--LLSTPLIRTF 135
Score = 29.1 bits (65), Expect = 3.5
Identities = 9/65 (13%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 194 QHYIQTLSQRLIEEQKSIQLGREYTNIRCDCYDLYGGEKFATLSELVQFYMENQGKEAEQ 253
+ Y+ ++S R ++ + N D +D ++ L++ Y + +
Sbjct: 66 EDYLFSVSFRRYSRSLHARIEQWNHNFSFDAHD-PCVFHSPDITGLLEHYKDPSACMFFE 124
Query: 254 LILQK 258
+L
Sbjct: 125 PLLST 129
>2hmh_A Suppressor of cytokine signaling 3; SOCS3, GP130, PTyr, peptide
complex, cytokine regulator; HET: PTR; 2.00A {Mus
musculus}
Length = 152
Score = 87.3 bits (216), Expect = 2e-20
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGE--- 304
G EA L L G+FL+R+S + F LSV+T ++ I+ + + +
Sbjct: 43 GGEANLL-LSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQXEGGSFSLQSDPRST 101
Query: 305 ----QFDSLTQLIEHYKRNPMVETSG 326
+FD + +L+ HY + S
Sbjct: 102 QPVPRFDXVLKLVHHYMPPQALPGST 127
>2kno_A Tensin-like C1 domain-containing phosphatase; SH2 domain, TENC1,
solution structure, cell junctio membrane, hydrolase,
membrane, metal-binding; NMR {Homo sapiens} PDB: 2l6k_A
Length = 131
Score = 83.8 bits (207), Expect = 2e-19
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 19/91 (20%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRT---------------DDKVTHVMIRC 293
+A L L+ G+FL+R+S S G + L+++ + V H +I
Sbjct: 30 DQAIAL-LKDKDPGAFLIRDSHSFQGAYGLALKVATPPPSAQPWKGDPVEQLVRHFLIET 88
Query: 294 QAEKYDVGGGEQ---FDSLTQLIEHYKRNPM 321
+ + G F SL+ L+ + +P+
Sbjct: 89 GPKGVKIKGCPSEPYFGSLSALVSQHSISPI 119
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 87.1 bits (216), Expect = 3e-18
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQFD 307
AE L L G NGSFLVRES+S PG +S+R + +V H I ++ K V +F+
Sbjct: 115 NAAEYL-LSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFN 173
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQP 334
+L +L+ H+ G + L P
Sbjct: 174 TLAELVHHHSTVA----DGLITTLHYP 196
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 80.9 bits (199), Expect = 6e-18
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDK-----VTHVMIRCQAEK-YDVG 301
K+AE+ +L G +GSFL+RES+S G F LSVR D+ V H IR + +
Sbjct: 84 KDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYIS 143
Query: 302 GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQP 334
F L +L+ HY G L +P
Sbjct: 144 PRITFPGLHELVRHYTNAS----DGLCTRLSRP 172
Score = 34.3 bits (78), Expect = 0.055
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQG 248
+ + F L ELV+ Y
Sbjct: 138 GGFYISPRITFPGLHELVRHYTNASD 163
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 85.5 bits (212), Expect = 6e-18
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
++AE+L L + G FLVRES + PGD+ L V + KV H I A K + F++
Sbjct: 90 EQAERL-LYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLSIDEEVYFEN 148
Query: 309 LTQLIEHYKRNPMVETSGTVVHLKQP 334
L QL+EHY + G L +P
Sbjct: 149 LMQLVEHYTTDA----DGLCTRLIKP 170
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 86.5 bits (214), Expect = 7e-18
Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 6/149 (4%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 306
EAE+ + G +G FL+R+ G +VLS+ D + H I Q Y + GG+
Sbjct: 18 AEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNGTYAIAGGKAH 77
Query: 307 DSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEF 366
+L E Y R+P G +L++P N +
Sbjct: 78 CGPAELCEFYSRDP----DGLPCNLRKPCNRPSGLEPQPGVFDCLRDAMVRDYVRQTWKL 133
Query: 367 ESLQQQESRHLFTRREGQKLDNRNKNRYK 395
E +++ + + + R
Sbjct: 134 EGEALEQAIISQAPQVEKLIATTAHERMP 162
Score = 72.3 bits (177), Expect = 2e-13
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAE-KYDVGGGEQF 306
+EAE+ + +G FL+R + G + LS+ V H +I KY + G +F
Sbjct: 171 EEAERKLYSGAQTDGKFLLRPRKE-QGTYALSLIYGKTVYHYLISQDKAGKYCIPEGTKF 229
Query: 307 DSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVT 350
D+L QL+E+ K G + LK+ + + ++ T
Sbjct: 230 DTLWQLVEYLKLKA----DGLIYCLKEACPNSSASNASGAAAPT 269
>3maz_A Signal-transducing adaptor protein 1; modular domain,
phosphotyrosine, specificity, cytoplasm, phosphoprotein,
SH2 domain, signaling protein; HET: PTR; 1.90A {Homo
sapiens}
Length = 125
Score = 79.1 bits (195), Expect = 8e-18
Identities = 10/76 (13%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTD---DKVTHVMIRCQAEK--YDVGGG 303
KEA +++ + G+ ++R S ++ +++R + ++ H + + ++
Sbjct: 25 KEATEMLQKNPSLGNMILRPG-SDSRNYSITIRQEIDIPRIKHYKVMSVGQNYTIELEKP 83
Query: 304 EQFDSLTQLIEHYKRN 319
+L +I+++ +
Sbjct: 84 VTLPNLFSVIDYFVKE 99
Score = 34.0 bits (78), Expect = 0.034
Identities = 3/34 (8%), Positives = 10/34 (29%)
Query: 224 CYDLYGGEKFATLSELVQFYMENQGKEAEQLILQ 257
+L L ++ ++++ I
Sbjct: 77 TIELEKPVTLPNLFSVIDYFVKETRGNLRPFIAS 110
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 80.0 bits (198), Expect = 2e-16
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
E +L++ +G FLVRESQ ++VLSV D H +I+ + GE F S
Sbjct: 23 AEVAELLVH---SGDFLVRESQG-KQEYVLSVLWDGLPRHFIIQ-SLDNLYRLEGEGFPS 77
Query: 309 LTQLIEHYKRNPMVETSGTVVHLKQPF 335
+ LI+H T + V L +
Sbjct: 78 IPLLIDHLLSTQQPLTKKSGVVLHRAV 104
>2cr4_A 3BP-2, SH3 domain-binding protein 2; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 126
Score = 74.0 bits (181), Expect = 5e-16
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 242 FYMENQGKEAEQLILQKG-----KNGSFLVRESQSKPGDFVLSV-RTDDKVTHVMIRCQA 295
F + E E+L ++G + +R S +K G ++ T +KV + I +
Sbjct: 20 FVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKD 79
Query: 296 EKYDVGGGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVS 343
K+ + G F S+ ++EHY + + + L+ P+ T S
Sbjct: 80 SKFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLL--LRHPYGYTSGPSS 125
Score = 29.0 bits (64), Expect = 2.3
Identities = 7/36 (19%), Positives = 16/36 (44%)
Query: 223 DCYDLYGGEKFATLSELVQFYMENQGKEAEQLILQK 258
+ L G F ++ +V+ Y + + L+L+
Sbjct: 80 SKFYLEGEVLFVSVGSMVEHYHTHVLPSHQSLLLRH 115
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 79.2 bits (195), Expect = 1e-15
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDK-----VTHVMIRCQAE-KYDVG 301
+E+E+L+L G+FLVRES++ G + LSV D V H IR + +
Sbjct: 158 RESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYIT 217
Query: 302 GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKE 355
QF+SL QL+ +Y ++ G L ++ + E+ +E
Sbjct: 218 SRTQFNSLQQLVAYYSKHA----DGLCHRLTTVCPTSKPQTQGLAKDAWEIPRE 267
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 78.2 bits (193), Expect = 2e-15
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRT-----DDKVTHVMIRCQAE-KYDVG 301
K+AE+ +L G GSF++R+S++ G + LSVR D V H IR + +
Sbjct: 80 KDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYIS 139
Query: 302 GGEQFDSLTQLIEHYKRNP 320
F +L +L++HYK+
Sbjct: 140 PRSTFSTLQELVDHYKKGN 158
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 76.6 bits (187), Expect = 2e-15
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
+EA+ LQ ++G FLVR+S + PGD+VLSV + +V+H +I + G ++FD
Sbjct: 22 QEAQTR-LQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDH 80
Query: 309 LTQLIEHYKRNPM 321
L L+E YK + +
Sbjct: 81 LPALLEFYKIHYL 93
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A
2eyw_A
Length = 230
Score = 73.0 bits (178), Expect = 9e-15
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 18/130 (13%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG------- 301
+EA L LQ ++G FLVR+S + PGD+VLSV + +V+H +I + V
Sbjct: 23 QEAVAL-LQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQPP 81
Query: 302 ----------GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTE 351
G ++FDSL L+E YK + + T+ + + I + V
Sbjct: 82 PGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVRA 141
Query: 352 LQKENSSKAG 361
L N +
Sbjct: 142 LFDFNGNDEE 151
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 75.6 bits (186), Expect = 1e-14
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDD-----KVTHVMIRCQAE-KYDVG 301
+E+E+L+L G+FLVRES++ G + LSV D V H IR + +
Sbjct: 75 RESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYIT 134
Query: 302 GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKE 355
QF+SL QL+ +Y ++ G L ++ + E+ +E
Sbjct: 135 SRTQFNSLQQLVAYYSKHA----DGLCHRLTTVCPTSKPQTQGLAKDAWEIPRE 184
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 67.8 bits (165), Expect = 4e-13
Identities = 27/138 (19%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDS 308
+AE+++ ++ +G+FL+RES+S PGDF LSV+ + V H + +F+S
Sbjct: 68 AKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNS 127
Query: 309 LTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFES 368
L +L+++++ + + + V + D + E + G +
Sbjct: 128 LNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRG--DFIHV 185
Query: 369 LQQQES---RHLFTRREG 383
+ + + + G
Sbjct: 186 MDNSDPNWWKGACHGQTG 203
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A
2l3q_A 2ggr_A
Length = 304
Score = 66.9 bits (162), Expect = 3e-12
Identities = 30/147 (20%), Positives = 50/147 (34%), Gaps = 5/147 (3%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
+EA L LQ ++G FLVR+S + PGD+VLSV + +V+H +I + V
Sbjct: 20 RQEAVAL-LQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPSPAQP 78
Query: 308 SLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDR---VTELQKENSSKAGFWE 364
+ S + + T +A +
Sbjct: 79 PPGVSPSRLRIGDQEFDSLPALLEFYKIHYLDTTTLIEPVSRSRQGSGVILRQEEAEYVR 138
Query: 365 EFESLQQQESRHLFTRREGQKLDNRNK 391
+ L ++G L R+K
Sbjct: 139 ALFDFNGNDEEDL-PFKKGDILRIRDK 164
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 59.9 bits (145), Expect = 8e-11
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 29/97 (29%)
Query: 94 IVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWF 153
+ ++ + + +VHC GIGRTGT + + I GL+ E I ++
Sbjct: 77 QFLTIMKWLLSEKEGNLVHCVGGIGRTGTILASYL----ILTEGLEVESAIDE-VR---- 127
Query: 154 KLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVY 190
++P G VQT Q F+
Sbjct: 128 LVRP--------------------GAVQTYEQEMFLL 144
Score = 48.3 bits (115), Expect = 7e-07
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMILDQ 102
+VHC GIGRTGT + +IL +
Sbjct: 90 EGNLVHCVGGIGRTGTILASYLILTE 115
Score = 35.6 bits (82), Expect = 0.019
Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 485 KTYGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHFQAWPDHGVPSDPGCV 540
+ G V + E + + + H PD GVPSD +
Sbjct: 25 RKEGVKRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLHI-PIPDGGVPSDSQFL 79
Score = 34.1 bits (78), Expect = 0.053
Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 15/85 (17%)
Query: 524 HFQAWPDHGVPSDPGCVLNFLYEVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHFQ 583
W GV V + + +E + + +++ +S + + H
Sbjct: 20 EILEWRKEGV----KRV------LVLPEDWE-IEESWGDKDYYLSILKK--NGLQPLHI- 65
Query: 584 AWPDHGVPSDPGCVLNFLYEVNTRQ 608
PD GVPSD L + + + +
Sbjct: 66 PIPDGGVPSDSQF-LTIMKWLLSEK 89
>2el8_A Signal-transducing adaptor protein 2; SH2 domain, phosphotyrosine
binding domain, protein tyrosine kinase, signal
transduction, structural genomics; NMR {Homo sapiens}
Length = 118
Score = 55.2 bits (132), Expect = 1e-09
Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 10/105 (9%)
Query: 231 EKFATLSELVQFYMENQGKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTD----DKV 286
E+ E +++ EA+ L+ + + G+ L+R S ++ R V
Sbjct: 13 EEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVV 72
Query: 287 THVMIRCQAEKY--DVGGGEQFDSLTQLIEHYKRNPMVETSGTVV 329
H ++ + KY DV SL ++ ++ T +V
Sbjct: 73 RHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVS----HTKKALV 113
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 57.9 bits (139), Expect = 8e-09
Identities = 69/505 (13%), Positives = 144/505 (28%), Gaps = 145/505 (28%)
Query: 183 EAQYKF---VYLAVQHYIQTLSQRLIEEQ-KSIQLGREYTNIRCDCYDLYGGEKFATLSE 238
E QY++ + + ++ + +++ KSI E +I +
Sbjct: 13 EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHI------------IMSKDA 60
Query: 239 LVQFY-----MENQGKEAEQLILQKG--KNGSFLV----RESQSKPGDFVLSVRTDDKV- 286
+ + ++ +E Q +++ N FL+ E + + + D++
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 287 --THVMIRCQAEKYDVGGGEQFDSLTQLIEHYKRNPMVETSG------TV---------- 328
V KY+V + + L Q + + V G T
Sbjct: 121 NDNQVFA-----KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK 175
Query: 329 VHLKQPFNATRITVSNIH---DRVTELQK-----------ENSSKAGFWEEFESLQQQES 374
V K F + + N + + LQK + + S+Q E
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-EL 234
Query: 375 RHLFTRREGQK----LDN-RNKNRYKNILPFDH-------TRVKLKDVDEDVPGAEYINA 422
R L + + L N +N + F+ TR K V + + A +
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWN---AFNLSCKILLTTRFK--QVTDFLSAATTTHI 289
Query: 423 NYIQSEDG-----GKSYIA-----TQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKN 472
+ KS + LP + N R + + + + G
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL-------TTNPRRLSIIAESIRDGLA 342
Query: 473 KCAKYWPDDHQSKTYGAVCVNNMYESVTTDYILREFLVSKGSESPRKIYHYHFQAWPDH- 531
W K + +TT I+ L RK++ +P
Sbjct: 343 T-WDNW------KHVN-------CDKLTT--IIESSLNVLEPAEYRKMFDR-LSVFPPSA 385
Query: 532 GVPSDPGCVLNFLYEVCVNNMYESVTTDYILREF----LVSKGSESPRKIYHYHFQAWPD 587
+P+ +L+ ++ ++ +S ++ + LV K +
Sbjct: 386 HIPTI---LLSLIW----FDVIKSDVMV-VVNKLHKYSLVEKQPKEST--ISIP------ 429
Query: 588 HGVPSDPGCVLNFLYEVNTRQDIHA 612
L ++ +H
Sbjct: 430 -------SIYLELKVKLENEYALHR 447
Score = 46.4 bits (109), Expect = 3e-05
Identities = 88/697 (12%), Positives = 186/697 (26%), Gaps = 267/697 (38%)
Query: 3 YRVILAVYLTS-----SMRLIQGRIYMQVTKEDIS--LSFPGPWTKYFMPYTYLLIWL-- 53
Y+ IL+V+ + + +Q ++KE+I + + T L W
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG-----TLRLFWTLL 72
Query: 54 ----GLADLFLIYSPRDQTNMKYSISAGPVVVHCSAGIGRTGTFI--------------- 94
+ F+ + N Y P+ T +I
Sbjct: 73 SKQEEMVQKFV--EEVLRIN--YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK 128
Query: 95 ----------VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDI 144
+ L +++ V++ G G+ T++ +D+ L + +D +I
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK--TWVALDVCLSYKVQCKMDFKI-- 184
Query: 145 QRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRL 204
W LK + NS ++ + +Q L ++
Sbjct: 185 ------FWLNLK-NCNSPETVLEM----------------------------LQKLLYQI 209
Query: 205 IEEQKSIQLGREYTNIRCDCYDLYGGEKFATLSELVQFYMENQGKEAEQLILQKGKNGSF 264
+ +NI+ + + +EL + + L+L
Sbjct: 210 --DPNWTSRSDHSSNIKLRIHSIQ--------AELRRLLKSKPYENC-LLVLLN------ 252
Query: 265 LVRESQS-KPGDF---VLSVRTDDK-VTHVMIRCQAEKYDV----GGGEQFDSLTQLI-- 313
V+ +++ + +L + T K VT + + + + L+
Sbjct: 253 -VQNAKAWNAFNLSCKIL-LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY 310
Query: 314 ----------EHYKRNPMVETSGTVVHLKQPFNATRITVSNI-HDRVTELQKENSSKAGF 362
E NP + + AT ++ D++T + + SS
Sbjct: 311 LDCRPQDLPREVLTTNPRR--LSIIAESIRDGLATWDNWKHVNCDKLTTIIE--SS---- 362
Query: 363 WEEFESLQQQESRHLFTRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINA 422
L+ E R +F +L ++ P +P
Sbjct: 363 ---LNVLEPAEYRKMF-----DRL---------SVFP--------PSA--HIP------- 388
Query: 423 NYIQSEDGGKSYIATQGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKY----- 477
+ S++W + + ++ NK KY
Sbjct: 389 -------------------TILL----SLIWFD------VIKSDVMVVVNKLHKYSLVEK 419
Query: 478 WPDD----------------------HQS-----KTYGAVCVNNMYESVTTDYI------ 504
P + H+S +++ Y
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH 479
Query: 505 -LREFLVSKGSESPRKIY-HYHF---------QAWPDHGVPSDPGCVLNFL-----YE-- 546
L+ + R ++ + F AW + G +LN L Y+
Sbjct: 480 HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW------NASGSILNTLQQLKFYKPY 533
Query: 547 VCVN-NMYESVTTDYILREFLVSKGSESPRKIYHYHF 582
+C N YE + + +FL + +
Sbjct: 534 ICDNDPKYERLVNAIL--DFLPKIEE----NLICSKY 564
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A
{Antonospora locustae}
Length = 178
Score = 52.9 bits (127), Expect = 3e-08
Identities = 13/107 (12%), Positives = 31/107 (28%), Gaps = 20/107 (18%)
Query: 229 GGEKFATLSELVQFYMEN----------------QGKEAEQLILQKGKNGS-FLVRESQS 271
+ F + E++ Y+ ++AE+L+ + + S+
Sbjct: 73 SNKHFEDIDEVISVYVRPILRNLKSIKAHAKYFNSPEDAEKLLSSFDGSKVVYAFYFSRK 132
Query: 272 KPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKR 318
PG + + I + F + + + KR
Sbjct: 133 YPGKLTFAYNN-GSILEEYIGVS-DMLTY-NNSTFKDIDSFVAYRKR 176
Score = 51.4 bits (123), Expect = 9e-08
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKV-THVMIRCQAEKYDVGGGEQF 306
E+E + + FL+R+ S+ G VL ++ V H+ I +E Y + F
Sbjct: 22 VTESENYL--RSSTDDFLIRKG-SRHGYCVLVIKFASDVFVHMKIEEHSEHYTCSN-KHF 77
Query: 307 DSLTQLIEHYKRN 319
+ + ++I Y R
Sbjct: 78 EDIDEVISVYVRP 90
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 53.3 bits (127), Expect = 2e-07
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 99 ILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTI 148
+ K + HC AG+GRT F+V+ IL K D I Q+ I
Sbjct: 225 FYKSLPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQRQKLI 274
Score = 47.1 bits (111), Expect = 1e-05
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 15/72 (20%)
Query: 96 IDMILDQIK---KHGPVVVHCSAGIGRTGTFIVI------------DMILDQIKKHGLDC 140
ID ++ + + + HC AG GRT ++ + D++ Q G
Sbjct: 517 IDEFINFTRTMPANAWLHFHCQAGAGRTTAYMAMYDMMKNPDVSLGDILSRQYLLGGNYV 576
Query: 141 EIDIQRTIQHAW 152
+I + W
Sbjct: 577 AYEIAKPKPDQW 588
Score = 43.3 bits (101), Expect = 2e-04
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMILDQIKKH 106
+ HC AG+GRT F+V+ IL K
Sbjct: 233 AWLHYHCYAGMGRTTIFMVMHDILKNAKDV 262
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 47.4 bits (113), Expect = 2e-06
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 96 IDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLD 139
+ ++ + + V VHC+ G GRTGT + + +K+ GL
Sbjct: 79 VQIVDEANARGEAVGVHCALGFGRTGTMLACYL----VKERGLA 118
Score = 40.1 bits (94), Expect = 5e-04
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMI 99
V VHC+ G GRTGT + ++
Sbjct: 90 EAVGVHCALGFGRTGTMLACYLV 112
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 49.4 bits (117), Expect = 2e-06
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDK---VTHVMIRCQAEKYD----- 299
+EA +L+ + G+FL+R+S S+PG++ L+VR D+ V H +I K D
Sbjct: 51 EEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAA 109
Query: 300 --VGGGEQFDSLTQLIEHYKRNPMVET 324
+ F + L+ H+K + E
Sbjct: 110 GVKIANQSFPDIPALLNHFKMRVLTEA 136
>3or8_A Transcription elongation factor SPT6; SH2, CTD binding; HET: MES;
1.60A {Candida glabrata} PDB: 3pjp_A* 3psj_A* 3psk_A
2l3t_A 3gxw_A 3gxx_A
Length = 197
Score = 46.0 bits (109), Expect = 8e-06
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKV-THVMIR--CQAEKYDVG--- 301
GK+AE L+ + G F++R+S ++ + D + HV I+ + +G
Sbjct: 16 GKQAEDY-LRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEKENPLALGKVL 74
Query: 302 --GGEQFDSLTQLIEHYKRN 319
G+++ L Q+I Y +N
Sbjct: 75 VVEGQRYHDLDQIIVEYLQN 94
Score = 38.3 bits (89), Expect = 0.003
Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 44/204 (21%)
Query: 144 IQRTIQHAWFK--------------------LKPSTNSSTSLFSITYKPYPNVSGMVQTE 183
+ R I H ++ ++ S+ L +IT+K ++
Sbjct: 2 MHRVINHPYYFPFNGKQAEDYLRSKERGDFVIRQSSRGDDHL-AITWKLDKDLF------ 54
Query: 184 AQYKFVYLAVQHYIQTLSQRLIEEQKSIQLGREYTNIRCDCYDLYGGEKFATLSELVQF- 242
Q+ + + L + L+ E G+ Y ++ Y K L+EL
Sbjct: 55 -QHVDIQELEKENPLALGKVLVVE------GQRYHDLD-QIIVEYLQNKIRLLNELTSNE 106
Query: 243 -YMENQGKEAEQLIL-QKGKNGSFLV---RESQSKPGDFVLSV--RTDDKVTHVMIRCQA 295
+ KE + I N V + PG F L + K+ ++
Sbjct: 107 KFKAGTKKEVVKFIEDYSKVNPKKSVYYFSLNYENPGWFYLIFKLNAESKLYIWNVKLTH 166
Query: 296 EKYDVGGGEQFDSLTQLIEHYKRN 319
+ + + ++ QL +K
Sbjct: 167 TGFFLVN-YNYPTVIQLCNGFKTL 189
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 43.6 bits (102), Expect = 4e-05
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 249 KEAEQLILQKG-KNGSFLVRESQSKPGDFVLSVRTDDKVTHV--MIRCQAEKYDVG---- 301
+EA +L+ + G+FL+R+S S+PG++ L+VR D+ V + + E + G
Sbjct: 22 EEAHKLLGEPQVSIGTFLMRDS-SRPGEYSLTVREADEGNAVCHYLIERGEPKEDGTAAA 80
Query: 302 ----GGEQFDSLTQLIEHYKRNPMVE 323
+ F + L+ H+K + E
Sbjct: 81 GVKIANQSFPDIPALLNHFKMRVLTE 106
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 42.0 bits (99), Expect = 1e-04
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIV 125
+ L V VHC AG R+ T +
Sbjct: 78 GVQFALKYQALGQCVYVHCKAGRSRSATMVA 108
Score = 35.1 bits (81), Expect = 0.022
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 77 GPVVVHCSAGIGRTGTFIV 95
V VHC AG R+ T +
Sbjct: 90 QCVYVHCKAGRSRSATMVA 108
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 40.4 bits (94), Expect = 6e-04
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 31/110 (28%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFK 154
+++ + +K + ++H G+GR+ ++ ID R +
Sbjct: 122 IMEELTTCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQA-IDSLRDL------ 174
Query: 155 LKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQTLSQRL 204
SG +QT QY + + + L+ L
Sbjct: 175 --------------------RGSGAIQTIKQYNY----LHEFRDKLAAHL 200
Score = 32.7 bits (74), Expect = 0.25
Identities = 4/23 (17%), Positives = 10/23 (43%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMI 99
++H G+GR+ ++
Sbjct: 134 RKTLIHSYGGLGRSCLVAACLLL 156
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 40.9 bits (95), Expect = 7e-04
Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 99 ILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEIDIQRTIQHAWFKLKPS 158
+ + + H AG+GRT F+V+ +L K + + + R + F
Sbjct: 206 FYRTLPQDAWLHFHSEAGVGRTTAFMVMTDML---KNPSVSLKDILYRQHEIGGFYYGEF 262
Query: 159 TNSSTSLFSITYKPYPNVSGMVQTEAQY 186
+ S K Y M++ +Y
Sbjct: 263 PIKTKDKDSWKTKYYREKIVMIEQFYRY 290
Score = 38.2 bits (88), Expect = 0.006
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMIL 100
+ H AG+GRT F+V+ +L
Sbjct: 214 AWLHFHSEAGVGRTTAFMVMTDML 237
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 40.8 bits (95), Expect = 0.001
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 94 IVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMI 129
IV + + G + VH AG+GRTGT I ++
Sbjct: 257 IVKEFLDICENAEGAIAVHSKAGLGRTGTLIACYIM 292
Score = 36.5 bits (84), Expect = 0.023
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMI 99
G + VH AG+GRTGT I ++
Sbjct: 270 GAIAVHSKAGLGRTGTLIACYIM 292
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC,
gtpas activation, metal-binding, phorbol-ester binding,
SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Length = 463
Score = 39.5 bits (92), Expect = 0.003
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 249 KEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTH 288
+ A+QL++ GS+L+RESQ +PG + L++R + +
Sbjct: 61 EAADQLLI--VAEGSYLIRESQRQPGTYTLALRFGSQTRN 98
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 36.5 bits (84), Expect = 0.008
Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Query: 101 DQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCE 141
D + VHC AG+GR + + + ++ +
Sbjct: 104 DPSVPPPTIGVHCVAGLGRAPILVALAL----VEYGNVSAL 140
Score = 34.6 bits (79), Expect = 0.045
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 71 KYSISAGPVVVHCSAGIGRTGTFIVIDMI 99
S+ + VHC AG+GR + + ++
Sbjct: 104 DPSVPPPTIGVHCVAGLGRAPILVALALV 132
>1uur_A Stata protein, STAT protein; transcription activator, SH2, signal
transduction, transducer, transcription factor; HET:
PTR; 2.7A {Dictyostelium discoideum} SCOP: a.47.1.1
b.2.5.5 d.93.1.1 PDB: 1uus_A*
Length = 473
Score = 37.3 bits (85), Expect = 0.013
Identities = 12/82 (14%), Positives = 27/82 (32%), Gaps = 6/82 (7%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGG---- 303
G++ LQ G+F++R S+ PG F ++ + + + D
Sbjct: 359 GRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKH-YLVQPNDTAAAKKTF 417
Query: 304 -EQFDSLTQLIEHYKRNPMVET 324
+ +Q + +
Sbjct: 418 PDFLSEHSQFVNLLQWTKDTNG 439
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 36.2 bits (83), Expect = 0.021
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 93 FIVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMI 129
FI + ++ + VHC+ G RTG I ++
Sbjct: 128 FIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLV 164
Score = 34.3 bits (78), Expect = 0.070
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMI 99
+ VHC+ G RTG I ++
Sbjct: 142 ELIGVHCTHGFNRTGFLICAFLV 164
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.0 bits (85), Expect = 0.021
Identities = 56/406 (13%), Positives = 114/406 (28%), Gaps = 173/406 (42%)
Query: 157 PSTNSSTSLFS--ITYKPYPNVSGMVQTEAQYKF---VYLAVQHY---------IQTLSQ 202
P+ + L + Y VS +V+ +F + L + + I L+
Sbjct: 54 PT--TPAELVGKFLGY-----VSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAA 106
Query: 203 RLIEEQ-----KSIQLGREYTNIRC-----------------------DCYDLYGG---- 230
+L++E K+ +L + Y R ++GG
Sbjct: 107 KLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNT 166
Query: 231 EKFATLSELVQFY----------MENQGKEAEQL---------ILQKGKN-GSFLVRESQ 270
+ + EL Y ++ + +L + +G N +L S
Sbjct: 167 DDY--FEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSN 224
Query: 271 SKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFDSLTQLIEHYKR-------NP--- 320
+ D++LS+ ++ +I + QL HY P
Sbjct: 225 TPDKDYLLSI----PISCPLI----------------GVIQLA-HYVVTAKLLGFTPGEL 263
Query: 321 MVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSKAGFWEEFESLQQQESRHLF-- 378
G H + A I ++ WE F ++ LF
Sbjct: 264 RSYLKGATGHSQGLVTAVAI-----------------AETDSWESFFVSVRKAITVLFFI 306
Query: 379 -TRREGQKLDNRNKNRYKNILPFDHTRVKLKDVDEDVPGAEYINANYIQSEDGGKSYIAT 437
R + + +T + +++ S +
Sbjct: 307 GVR--CYEA-------------YPNTSLPPSILED--------------SLENN------ 331
Query: 438 QGCLPSTMNDFWSMVWQENVRVIVMTTKEMERGKNKCAKYWPDDHQ 483
+G +PS M + + +T ++++ NK + P Q
Sbjct: 332 EG-VPSPM-----------LSISNLTQEQVQDYVNKTNSHLPAGKQ 365
Score = 31.2 bits (70), Expect = 1.2
Identities = 49/308 (15%), Positives = 96/308 (31%), Gaps = 108/308 (35%)
Query: 49 LLIWLGLA--DLFLIYSPRDQTNMKYSISAG---P---VVVHCSAGIGRTGTFIVIDMIL 100
+L ++G+ + + S + ++ S+ P + + + + + + +
Sbjct: 302 VLFFIGVRCYEAYPNTSLP-PSILEDSLENNEGVPSPMLSI---SNLTQE----QVQDYV 353
Query: 101 DQIKKHGPV--VVHCSAGIGRTGTFIV---------IDMILDQIK-KHGLDCEIDIQRTI 148
++ H P V S G +V +++ L + K GLD Q I
Sbjct: 354 NKTNSHLPAGKQVEISLVNGAK-NLVVSGPPQSLYGLNLTLRKAKAPSGLD-----QSRI 407
Query: 149 QHAWFKLKPSTNSSTSLF-SITYKPY--PNVSGMVQTEAQYKFVYL--AVQHYIQTLSQR 203
+ KLK S F + P+ L A + L +
Sbjct: 408 PFSERKLKFSNR-----FLPVA-SPFHSH---------------LLVPASDLINKDLVKN 446
Query: 204 LIEEQKSIQLGREYTNIRCDCYDLYGGEKFATLSELVQFYMENQGKEAEQLILQKGKNGS 263
+ + + YD + G LS + +E+++
Sbjct: 447 NVSFNAK-DI-------QIPVYDTFDGSDLRVLSGSI----------SERIVDC------ 482
Query: 264 FLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVG-GGEQFDSLTQLIEHYKRNPMV 322
++R P + + T K TH++ D G GG L L RN
Sbjct: 483 -IIRL----PVKWETT--TQFKATHIL--------DFGPGGAS--GLGVLT---HRN--K 520
Query: 323 ETSGT-VV 329
+ +G V+
Sbjct: 521 DGTGVRVI 528
Score = 31.2 bits (70), Expect = 1.5
Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 41/142 (28%)
Query: 467 ME-RGKNKCAK-YWP--DDHQSKTYG----AVCVNNMYESVTTDYILREFLVSKGSESPR 518
M+ +K A+ W D+H TYG + +NN + G E +
Sbjct: 1633 MDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNP----------VNLTIHFGGEKGK 1682
Query: 519 KIYHYH----FQAWPDHGVPSDPGCVLNFLYEVCVNNMYES---------------VTTD 559
+I + F+ D + ++ + + E + + S +
Sbjct: 1683 RIRENYSAMIFETIVDGKLKTEK--IFKEINEHSTSYTFRSEKGLLSATQFTQPALTLME 1740
Query: 560 YILREFLVSKGSESPRKIY--H 579
E L SKG + H
Sbjct: 1741 KAAFEDLKSKGLIPADATFAGH 1762
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 35.3 bits (81), Expect = 0.022
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMI 129
+ ++ V VHC+ GI RTG + ++
Sbjct: 103 TVKEFTEK-CPGMLVGVHCTHGINRTGYMVCRYLM 136
Score = 34.1 bits (78), Expect = 0.056
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMI 99
V VHC+ GI RTG + ++
Sbjct: 114 MLVGVHCTHGINRTGYMVCRYLM 136
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 35.4 bits (82), Expect = 0.023
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIV 125
V D I +KHG +VHC+AG+ R+ T +
Sbjct: 92 VADKIHSVSRKHGATLVHCAAGVSRSATLCI 122
Score = 27.7 bits (62), Expect = 9.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 77 GPVVVHCSAGIGRTGTFIV 95
G +VHC+AG+ R+ T +
Sbjct: 104 GATLVHCAAGVSRSATLCI 122
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 35.9 bits (82), Expect = 0.030
Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 7/93 (7%)
Query: 95 VIDMILDQIKK-HGPVVVHCSAGIGRTGTFIVI------DMILDQIKKHGLDCEIDIQRT 147
V+ + +K+ G VH +AG+GR + L + K + +
Sbjct: 94 VVGTLYKAVKRNGGVTYVHSTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKRSCFPKL 153
Query: 148 IQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMV 180
+ T ++T K +
Sbjct: 154 DAIRNATIDILTGLKRKTVTLTLKDKGFSRVEI 186
Score = 31.3 bits (70), Expect = 0.93
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 77 GPVVVHCSAGIGRTGTFIV 95
G VH +AG+GR +
Sbjct: 107 GVTYVHSTAGMGRAPAVAL 125
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 35.0 bits (81), Expect = 0.033
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIV 125
V + +++ PV+VH +AG+ R+G I+
Sbjct: 97 VTAFLSKCDQRNEPVLVHSAAGVNRSGAMIL 127
Score = 29.3 bits (66), Expect = 2.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 77 GPVVVHCSAGIGRTGTFIV 95
PV+VH +AG+ R+G I+
Sbjct: 109 EPVLVHSAAGVNRSGAMIL 127
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 34.2 bits (78), Expect = 0.044
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 93 FIVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCE 141
++ + I + + + VHC AG+GR + + +I + G+ E
Sbjct: 83 WLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI-----EGGMKYE 126
Score = 31.5 bits (71), Expect = 0.44
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 77 GPVVVHCSAGIGRTGTFI 94
+ VHC AG+GR +
Sbjct: 97 CCIAVHCVAGLGRAPVLV 114
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 34.8 bits (80), Expect = 0.046
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIV 125
+ +I K +++H G+ R+ T I+
Sbjct: 106 LTSIIHAATTKREKILIHAQCGLSRSATLII 136
Score = 28.2 bits (63), Expect = 5.7
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 77 GPVVVHCSAGIGRTGTFIV 95
+++H G+ R+ T I+
Sbjct: 118 EKILIHAQCGLSRSATLII 136
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 34.2 bits (79), Expect = 0.065
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
+ D I K G ++HC+AG+ R+ + +
Sbjct: 86 IADHIHSVEMKQGRTLLHCAAGVSRSAA-LCL 116
Score = 27.7 bits (62), Expect = 9.1
Identities = 6/20 (30%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Query: 77 GPVVVHCSAGIGRTGTFIVI 96
G ++HC+AG+ R+ + +
Sbjct: 98 GRTLLHCAAGVSRSAA-LCL 116
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 33.9 bits (78), Expect = 0.086
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIV 125
V + +++ PV+VHC+AG+ R+G I+
Sbjct: 114 VTAFLSKCDQRNEPVLVHCAAGVNRSGAMIL 144
Score = 28.1 bits (63), Expect = 5.8
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 77 GPVVVHCSAGIGRTGTFIV 95
PV+VHC+AG+ R+G I+
Sbjct: 126 EPVLVHCAAGVNRSGAMIL 144
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 33.9 bits (77), Expect = 0.089
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 93 FIVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCE 141
++ + I + + + VHC AG+GR + + +I + G+ E
Sbjct: 104 WLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALI-----EGGMKYE 147
Score = 30.8 bits (69), Expect = 0.77
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 77 GPVVVHCSAGIGRTGTFI 94
+ VHC AG+GR +
Sbjct: 118 CCIAVHCVAGLGRAPVLV 135
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 32.6 bits (75), Expect = 0.16
Identities = 5/32 (15%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
+ ++ G +V+C G R+ +
Sbjct: 78 TCAAMEAAVRDGGSCLVYCKNGRSRSAA-VCT 108
Score = 27.6 bits (62), Expect = 7.5
Identities = 5/20 (25%), Positives = 9/20 (45%), Gaps = 1/20 (5%)
Query: 77 GPVVVHCSAGIGRTGTFIVI 96
G +V+C G R+ +
Sbjct: 90 GSCLVYCKNGRSRSAA-VCT 108
>1y1u_A Signal transducer and activator of transcription; STAT,
DNA-binding, SH2 domain, transcription REGU signaling
protein; 3.21A {Mus musculus}
Length = 585
Score = 34.0 bits (77), Expect = 0.17
Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRCQAEKYDVGGGEQFD 307
K+ +L +G+FL+R S S+ G ++ + D ++ D
Sbjct: 472 NKQQAHDLLINKPDGTFLLRFSDSEIGGITIAWKFDSPDRNLWNLKPFTTRDF----SIR 527
Query: 308 SLTQLIEHY 316
SL +
Sbjct: 528 SLADRLGDL 536
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 32.6 bits (75), Expect = 0.17
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
I I + + +VHC AG+ R+ T +VI
Sbjct: 72 SIKFIHECRLRGESCLVHCLAGVSRSVT-LVI 102
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 32.6 bits (75), Expect = 0.17
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
+ I + + +++HC AG+ R+ T IVI
Sbjct: 72 AFEFIEEAHQCGKGLLIHCQAGVSRSAT-IVI 102
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 32.2 bits (74), Expect = 0.20
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
I+ I G +VH AGI R+ T IV
Sbjct: 73 CINFIHCCRLNGGNCLVHSFAGISRSTT-IVT 103
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 32.1 bits (74), Expect = 0.23
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
I K +VH G+ R+ + VI
Sbjct: 70 TYKFISKAKKHGSKCLVHSKMGVSRSAS-TVI 100
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 32.3 bits (74), Expect = 0.24
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
+ I + + +++HC AG+ R+ T IVI
Sbjct: 76 AFEFIEEAHQCGKGLLIHCQAGVSRSAT-IVI 106
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 32.2 bits (74), Expect = 0.26
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
I I+ I++ V++ G+ + IVI
Sbjct: 76 AIKFIIRSIQRKEGVLIISGTGVNKAPA-IVI 106
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 31.8 bits (73), Expect = 0.29
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIV 125
+ I ++ G V+VH +AGI R+ F++
Sbjct: 79 TKEFIDGSLQMGGKVLVHGNAGISRSAAFVI 109
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 31.7 bits (73), Expect = 0.30
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
I+ I G V+VH AGI R+ T I +
Sbjct: 70 AIEYIDAVKDCRGRVLVHSQAGISRSAT-ICL 100
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 32.4 bits (74), Expect = 0.30
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
ID I +K G V+VH AGI R+ T I +
Sbjct: 72 AIDFIDCVREKGGKVLVHSEAGISRSPT-ICM 102
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 32.1 bits (72), Expect = 0.38
Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 12/68 (17%)
Query: 348 RVTELQKENSSKAGFWEEFESLQQQESRHLFTRREGQKLD-NRNKNRYKNILPFDHTRVK 406
R+ EL + W E + ++ + +R+ ++++ N+ NR +
Sbjct: 97 RLQELDAASKVMEQEWRE----KAKKDLEEWNQRQSEQVEKNKINNR-------IADKAF 145
Query: 407 LKDVDEDV 414
+ D D+
Sbjct: 146 YQQPDADI 153
Score = 28.2 bits (62), Expect = 6.2
Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 203 RLIEEQKSIQLGREYTNIRCDCYDLYGGEKFATLSELVQFYMENQGKE-AEQLILQKGKN 261
RL +E +SI+ RE R D E + +E + +EQ+ K N
Sbjct: 79 RLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKNKINN 138
Query: 262 GSFLVRESQSKPGDFVLSVRTDDKV 286
R + F D +
Sbjct: 139 -----RIADKA---F-YQQPDADII 154
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 31.4 bits (72), Expect = 0.41
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
+ I + +K G V+VH +AG+ R IVI
Sbjct: 70 CFEFIEEAKRKDGVVLVHSNAGVSRAAA-IVI 100
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P
reductase, oxidoreductase; 2.60A {Eimeria tenella}
Length = 319
Score = 32.1 bits (73), Expect = 0.47
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 73 SISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPVVVHCSA-GIGRTGTFIVIDM 128
ISAGP+ ++ IG+ G ID+ +D + + P+ + +GR F++ +
Sbjct: 234 CISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPL 290
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 31.0 bits (71), Expect = 0.48
Identities = 9/32 (28%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVI 126
I+ I + + ++ V+VH AG+ R+ T + +
Sbjct: 74 AIEFIDEALSQNCGVLVHSLAGVSRSVT-VTV 104
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann
fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma
gondii} PDB: 2o50_A 3nj8_A*
Length = 315
Score = 32.1 bits (73), Expect = 0.49
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 73 SISAGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGPVVVHCSA-GIGRTGTFIVIDM 128
+ISAGP+ ++ IG++G ID +D + P+ + +G F++ +
Sbjct: 221 AISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPL 277
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 32.2 bits (72), Expect = 0.52
Identities = 10/38 (26%), Positives = 14/38 (36%)
Query: 92 TFIVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMI 129
F + +HC AG GRTG I ++
Sbjct: 97 PFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLL 134
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces
cerevisiae}
Length = 1219
Score = 31.8 bits (72), Expect = 0.84
Identities = 20/120 (16%), Positives = 52/120 (43%), Gaps = 13/120 (10%)
Query: 248 GKEAEQLILQKGKNGSFLVRESQSKPGDFVLSVRTDDKV-THVMIRCQAEKYDVG----- 301
G++AE L+ + G F++R+S V++ + D + H+ I+ ++ +
Sbjct: 1032 GRQAEDY-LRSKERGEFVIRQSSRGDDHLVITWKLDKDLFQHIDIQELEKENPLALGKVL 1090
Query: 302 --GGEQFDSLTQLIEHYKRNPMVETSGTVVHLKQPFNATRITVSNIHDRVTELQKENSSK 359
++++ L Q+I Y V + ++ + T+ ++ + + + N +K
Sbjct: 1091 IVDNQKYNDLDQIIVEYL-QNKVRLLNEMTSSEKFKSGTK---KDVVKFIEDYSRVNPNK 1146
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG
for eukaryotic structural genomics, phosphoprote
phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1
PDB: 2q47_A
Length = 151
Score = 30.1 bits (67), Expect = 1.2
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 95 VIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILD 131
+ ++LD +K+ PV++HC G RTG + L
Sbjct: 83 ALKVLLD--EKNHPVLIHCKRGKHRTGCLVGCLRKLQ 117
Score = 28.2 bits (62), Expect = 5.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 77 GPVVVHCSAGIGRTGTFIVIDMILD 101
PV++HC G RTG + L
Sbjct: 93 HPVLIHCKRGKHRTGCLVGCLRKLQ 117
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 30.8 bits (68), Expect = 1.4
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 96 IDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMI 129
+ + H + +H G GRTGT + ++
Sbjct: 110 AKVWMTSDPDHV-IAIHSKGGKGRTGTLVSSWLL 142
Score = 30.0 bits (66), Expect = 2.4
Identities = 17/147 (11%), Positives = 35/147 (23%), Gaps = 5/147 (3%)
Query: 79 VVVHCSAGIGRTGTFIVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGL 138
+ +H G GRTGT + ++ D G RT + + +
Sbjct: 122 IAIHSKGGKGRTGTLVSSWLLEDGK-FDTAKEALEYFGSRRTDFEVGDVFQGVETASQ-I 179
Query: 139 DCEIDIQRTIQHAWFKLKPSTNSSTSLFSITYKPYPNVSGMVQTEAQYKFVYLAVQHYIQ 198
++ ++ +L P + +T V G + Q +
Sbjct: 180 RYVGYFEKIKKNYGGQLPPM--KKLKVTGVTITAIQGV-GRGNGSDLSMQIVSERQEVLL 236
Query: 199 TLSQRLIEEQKSIQLGREYTNIRCDCY 225
+
Sbjct: 237 CKFAEGYNCALQYDATDDCVTCEVKNC 263
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 29.5 bits (67), Expect = 1.6
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 95 VIDMILDQIKKHGPVV-VHCSAGIGRTGTFIVI 126
D I + + G + VHC+ G+ R+ T +V+
Sbjct: 73 AADFIHRALSQPGGKILVHCAVGVSRSAT-LVL 104
Score = 27.2 bits (61), Expect = 9.2
Identities = 8/20 (40%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 77 GPVVVHCSAGIGRTGTFIVI 96
G ++VHC+ G+ R+ T +V+
Sbjct: 86 GKILVHCAVGVSRSAT-LVL 104
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 30.3 bits (67), Expect = 1.9
Identities = 6/26 (23%), Positives = 8/26 (30%)
Query: 104 KKHGPVVVHCSAGIGRTGTFIVIDMI 129
VVHC G + + I
Sbjct: 113 NPKNVCVVHCLDGRAASSILVGAMFI 138
Score = 29.5 bits (65), Expect = 3.4
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 79 VVVHCSAGIGRTGTFIVIDMI 99
VVHC G + + I
Sbjct: 118 CVVHCLDGRAASSILVGAMFI 138
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 30.1 bits (68), Expect = 1.9
Identities = 8/23 (34%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Query: 104 KKHGPVVVHCSAGIGRTGTFIVI 126
H ++VHC G R+ T +V+
Sbjct: 137 DDHSKILVHCVMGRSRSAT-LVL 158
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 29.2 bits (66), Expect = 2.4
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 95 VIDMILDQIKKHGPVV-VHCSAGIGRTGTFIVI 126
D I + + V VHC G R+ T +VI
Sbjct: 103 AADFIDQALAQKNGRVLVHCREGYSRSPT-LVI 134
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 28.9 bits (65), Expect = 3.5
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 95 VIDMILDQIKKHGPVV-VHCSAGIGRTGTFIVI 126
V I + V VHC+ G+ R+ T +V+
Sbjct: 119 VARYIRAALSVPQGRVLVHCAMGVSRSAT-LVL 150
>1rhy_A IGPD, imidazole glycerol phosphate dehydratase; dehydratases,
histidine biosynthesis, LEFT-handed B-A-B CROS motif,
gene duplication; 2.30A {Filobasidiella neoformans}
SCOP: d.14.1.9 d.14.1.9
Length = 202
Score = 29.1 bits (66), Expect = 3.7
Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 15/61 (24%)
Query: 92 TFIVIDMILDQIKKHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGL---------DCEI 142
T I + LD I ++ S GIG F+ D + + KHG D I
Sbjct: 15 THISCTIDLDHIPGVTEQKINVSTGIG----FL--DHMFTALAKHGGMSLQLQCKGDLHI 68
Query: 143 D 143
D
Sbjct: 69 D 69
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics,
putative 2-dehydropantoate 2-reductase, protein
structure initiative; 2.30A {Staphylococcus aureus
subsp}
Length = 294
Score = 29.1 bits (66), Expect = 3.9
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Query: 105 KHGPVVVHCSAGIGRTGTFIVIDMILDQIKKHGLDCEI--DIQRTIQHAWFKL 155
K G VV H R + D ++ +D + +IQ+ I W+KL
Sbjct: 121 KKGDVVTHFRDYQLRIQDNALTRQFRDLVQDSQIDIVLEANIQQAI---WYKL 170
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint
center for structural genomics, JCSG; HET: MSE; 1.40A
{Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Length = 157
Score = 28.4 bits (63), Expect = 4.0
Identities = 8/22 (36%), Positives = 10/22 (45%), Gaps = 1/22 (4%)
Query: 105 KHGPVVVHCSAGIGRTGTFIVI 126
K V+VHC A R F +
Sbjct: 96 KGKDVLVHCLANY-RASAFAYL 116
Score = 27.6 bits (61), Expect = 7.2
Identities = 7/24 (29%), Positives = 9/24 (37%), Gaps = 1/24 (4%)
Query: 73 SISAGPVVVHCSAGIGRTGTFIVI 96
V+VHC A R F +
Sbjct: 94 QHKGKDVLVHCLANY-RASAFAYL 116
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin,
actin/tubulin binding, hexadec chaperone; HET: ADP;
3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d*
Length = 528
Score = 29.0 bits (66), Expect = 4.6
Identities = 6/26 (23%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 94 IVIDMILDQIKKHGPVVVHCSAGIGR 119
++++ +IKK V+ I R
Sbjct: 270 YLLNIC-KKIKKAKCNVLLIQKSILR 294
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM,
subunit arrangement, acetylation, ATP-binding,
chaperone, cytoplasm, isopeptide bond; 4.00A {Bos
taurus}
Length = 518
Score = 29.0 bits (66), Expect = 5.6
Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 94 IVIDMILDQIKKHGPVVVHCSAGIGR 119
+++++ QIKK G V+ I R
Sbjct: 261 YILNLV-KQIKKTGCNVLLIQKSILR 285
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex,
cytokine activation, complex (transcription factor/DNA),
transcription/DNA complex; HET: DNA PTR; 2.25A {Mus
musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Length = 596
Score = 28.7 bits (63), Expect = 6.7
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 248 GKEAEQLILQKGKNGSFLVRES-QSKPGDFVLSVRTDDKVTHVMIR 292
KE E+ IL G+FL+R S SK G + D I+
Sbjct: 464 SKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQ 509
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural
genomics, PSI-2, protein structure initiative; 3.20A
{Archaeoglobus fulgidus dsm 4304}
Length = 261
Score = 28.1 bits (63), Expect = 9.1
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 14/76 (18%)
Query: 78 PVVVHCSAGIGRTGTFIVIDMILD-QIKKHGPVVVHCSAG-----------IGRTG--TF 123
P ++H G T ++++ V+ H + IG T
Sbjct: 125 PCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHVNFETLDMVLETEYWIGLTVQPGK 184
Query: 124 IVIDMILDQIKKHGLD 139
+ + + +HG +
Sbjct: 185 LSAEDAARIVAEHGPE 200
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.136 0.413
Gapped
Lambda K H
0.267 0.0533 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 9,493,235
Number of extensions: 574360
Number of successful extensions: 2096
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1804
Number of HSP's successfully gapped: 438
Length of query: 614
Length of database: 6,701,793
Length adjustment: 99
Effective length of query: 515
Effective length of database: 3,937,614
Effective search space: 2027871210
Effective search space used: 2027871210
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.3 bits)