Query psy852
Match_columns 891
No_of_seqs 390 out of 3349
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 21:03:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy852.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/852hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k40_A Aromatic-L-amino-acid d 100.0 8.3E-52 2.8E-56 479.6 36.4 402 4-760 60-469 (475)
2 4e1o_A HDC, histidine decarbox 100.0 1.6E-51 5.4E-56 477.6 38.5 403 4-760 65-476 (481)
3 3vp6_A Glutamate decarboxylase 100.0 8.6E-46 2.9E-50 433.0 41.6 400 6-760 84-503 (511)
4 1js3_A DDC;, DOPA decarboxylas 100.0 1.8E-45 6E-50 426.1 36.2 405 4-760 60-472 (486)
5 2qma_A Diaminobutyrate-pyruvat 100.0 1.3E-43 4.4E-48 412.1 39.5 397 4-760 87-494 (497)
6 2okj_A Glutamate decarboxylase 100.0 4.3E-43 1.5E-47 408.4 41.3 399 6-759 81-499 (504)
7 2jis_A Cysteine sulfinic acid 100.0 8.8E-42 3E-46 398.8 41.1 398 5-759 96-512 (515)
8 2dgk_A GAD-beta, GADB, glutama 100.0 3.7E-33 1.3E-37 320.0 37.2 382 5-760 33-432 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 1.1E-31 3.7E-36 313.0 36.8 377 14-760 52-442 (502)
10 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 5.1E-29 1.7E-33 284.9 14.9 273 18-467 68-348 (450)
11 3mc6_A Sphingosine-1-phosphate 99.9 5.9E-26 2E-30 262.9 22.3 310 11-467 60-373 (497)
12 3mad_A Sphingosine-1-phosphate 99.9 7.4E-25 2.5E-29 255.3 25.8 317 5-467 86-404 (514)
13 2z67_A O-phosphoseryl-tRNA(SEC 99.9 3.3E-24 1.1E-28 246.6 15.3 248 48-466 124-379 (456)
14 3f9t_A TDC, L-tyrosine decarbo 99.9 7.7E-20 2.6E-24 202.2 30.6 314 6-467 20-335 (397)
15 4e1o_A HDC, histidine decarbox 99.8 4.8E-19 1.6E-23 205.2 25.4 178 445-622 120-340 (481)
16 3k40_A Aromatic-L-amino-acid d 99.8 4.3E-19 1.5E-23 205.4 23.7 275 445-815 115-433 (475)
17 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 9E-20 3.1E-24 206.8 16.5 237 55-460 115-356 (501)
18 3mc6_A Sphingosine-1-phosphate 99.8 6.3E-19 2.1E-23 203.9 23.1 280 445-760 109-435 (497)
19 3mad_A Sphingosine-1-phosphate 99.8 8.3E-18 2.8E-22 195.8 26.0 280 446-760 142-467 (514)
20 4hvk_A Probable cysteine desul 99.8 9.8E-16 3.4E-20 168.3 33.3 170 19-235 2-177 (382)
21 1wyu_B Glycine dehydrogenase s 99.8 2E-16 6.9E-21 182.6 28.8 290 15-465 65-368 (474)
22 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 3.7E-17 1.3E-21 187.0 22.3 256 468-760 121-441 (450)
23 2z67_A O-phosphoseryl-tRNA(SEC 99.7 4.1E-17 1.4E-21 187.5 22.7 263 447-758 137-454 (456)
24 3nnk_A Ureidoglycine-glyoxylat 99.7 1.2E-15 4E-20 170.5 32.7 168 14-235 8-178 (411)
25 3f9t_A TDC, L-tyrosine decarbo 99.7 1E-15 3.5E-20 169.1 30.0 279 447-759 73-395 (397)
26 2dr1_A PH1308 protein, 386AA l 99.7 1.4E-14 4.8E-19 160.1 35.6 164 18-235 20-186 (386)
27 3ffr_A Phosphoserine aminotran 99.7 3.7E-15 1.3E-19 163.0 28.5 107 645-759 250-361 (362)
28 3vp6_A Glutamate decarboxylase 99.7 7.6E-16 2.6E-20 179.8 21.7 172 446-625 138-350 (511)
29 3zrp_A Serine-pyruvate aminotr 99.7 3.5E-14 1.2E-18 156.6 31.8 137 51-235 29-167 (384)
30 1t3i_A Probable cysteine desul 99.7 4.4E-14 1.5E-18 157.9 33.0 171 19-235 30-209 (420)
31 3isl_A Purine catabolism prote 99.6 4.3E-15 1.5E-19 166.2 21.5 288 11-467 3-316 (416)
32 1kmj_A Selenocysteine lyase; p 99.6 1.6E-13 5.5E-18 152.4 33.2 171 19-235 25-204 (406)
33 1js3_A DDC;, DOPA decarboxylas 99.6 4.5E-16 1.6E-20 179.7 13.0 175 447-623 117-335 (486)
34 4eb5_A Probable cysteine desul 99.6 5.3E-14 1.8E-18 155.2 26.6 275 19-467 2-283 (382)
35 3qm2_A Phosphoserine aminotran 99.6 6.8E-16 2.3E-20 174.3 11.5 164 18-234 27-201 (386)
36 1iug_A Putative aspartate amin 99.6 6.2E-14 2.1E-18 152.9 26.6 151 26-235 9-163 (352)
37 3lvm_A Cysteine desulfurase; s 99.6 7.4E-14 2.5E-18 156.8 27.4 278 19-467 24-311 (423)
38 2z9v_A Aspartate aminotransfer 99.6 9.9E-14 3.4E-18 154.0 25.7 280 16-466 7-295 (392)
39 2okj_A Glutamate decarboxylase 99.6 5.5E-15 1.9E-19 171.7 15.7 169 447-623 136-345 (504)
40 3vax_A Putative uncharacterize 99.6 8.3E-14 2.8E-18 155.1 24.1 175 15-235 18-199 (400)
41 3e9k_A Kynureninase; kynurenin 99.6 2.5E-14 8.5E-19 164.0 19.3 290 19-467 69-393 (465)
42 2yrr_A Aminotransferase, class 99.6 1.7E-14 5.7E-19 157.0 16.3 250 51-466 27-280 (353)
43 3a9z_A Selenocysteine lyase; P 99.6 1.7E-13 5.7E-18 154.8 24.6 183 17-234 18-224 (432)
44 2qma_A Diaminobutyrate-pyruvat 99.6 1.3E-14 4.5E-19 168.2 15.6 161 447-610 144-344 (497)
45 1wyu_B Glycine dehydrogenase s 99.6 1.1E-13 3.7E-18 159.7 22.2 285 447-760 111-439 (474)
46 3kgw_A Alanine-glyoxylate amin 99.6 2.1E-13 7.3E-18 150.7 23.5 282 14-466 18-312 (393)
47 1eg5_A Aminotransferase; PLP-d 99.6 6.7E-13 2.3E-17 146.2 27.2 171 19-235 3-181 (384)
48 1vjo_A Alanine--glyoxylate ami 99.6 1.9E-13 6.4E-18 152.1 22.8 277 19-467 35-321 (393)
49 2jis_A Cysteine sulfinic acid 99.6 1.7E-14 5.9E-19 168.2 14.7 168 447-623 152-360 (515)
50 3cai_A Possible aminotransfera 99.5 1.9E-13 6.4E-18 152.7 21.5 171 18-235 27-205 (406)
51 3m5u_A Phosphoserine aminotran 99.5 4.8E-14 1.6E-18 157.9 16.3 278 443-760 49-358 (361)
52 2huf_A Alanine glyoxylate amin 99.5 3.2E-13 1.1E-17 150.0 22.5 250 52-467 47-309 (393)
53 2bkw_A Alanine-glyoxylate amin 99.5 2.9E-13 9.9E-18 149.4 21.5 285 18-466 4-307 (385)
54 3e77_A Phosphoserine aminotran 99.5 3.4E-14 1.2E-18 159.9 12.3 271 21-465 16-298 (377)
55 1wyu_A Glycine dehydrogenase ( 99.5 9.4E-13 3.2E-17 149.9 24.2 240 50-467 101-371 (438)
56 3isl_A Purine catabolism prote 99.5 4.8E-13 1.7E-17 149.5 21.2 282 446-760 47-388 (416)
57 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 4E-13 1.4E-17 152.7 19.1 235 507-763 163-462 (501)
58 4eb5_A Probable cysteine desul 99.5 7.7E-12 2.6E-16 137.8 28.8 269 447-760 47-371 (382)
59 3kgw_A Alanine-glyoxylate amin 99.5 4.3E-12 1.5E-16 140.2 25.1 280 447-760 60-386 (393)
60 1elu_A L-cysteine/L-cystine C- 99.5 2.1E-12 7.2E-17 142.8 22.4 283 19-467 18-324 (390)
61 2ch1_A 3-hydroxykynurenine tra 99.5 3.3E-12 1.1E-16 141.9 23.5 281 14-466 13-307 (396)
62 2e7j_A SEP-tRNA:Cys-tRNA synth 99.5 1.6E-12 5.4E-17 143.0 20.1 171 19-236 10-188 (371)
63 2yrr_A Aminotransferase, class 99.5 2.6E-12 8.9E-17 139.7 21.4 277 447-759 37-350 (353)
64 3ke3_A Putative serine-pyruvat 99.5 9.5E-13 3.2E-17 146.9 18.0 251 49-467 27-301 (379)
65 3f0h_A Aminotransferase; RER07 99.4 2.5E-12 8.6E-17 141.9 20.6 251 51-466 46-303 (376)
66 3e77_A Phosphoserine aminotran 99.4 1.3E-12 4.5E-17 147.0 18.5 285 443-760 57-373 (377)
67 3e9k_A Kynureninase; kynurenin 99.4 2.5E-12 8.5E-17 147.3 20.7 279 448-760 116-459 (465)
68 1vjo_A Alanine--glyoxylate ami 99.4 9.2E-12 3.2E-16 138.3 23.6 279 447-759 71-392 (393)
69 2vyc_A Biodegradative arginine 99.4 2.6E-12 8.9E-17 156.7 20.5 203 144-467 247-481 (755)
70 1svv_A Threonine aldolase; str 99.4 4.6E-12 1.6E-16 138.2 20.3 167 20-237 17-189 (359)
71 2huf_A Alanine glyoxylate amin 99.4 1.5E-11 5.2E-16 136.4 24.6 280 447-760 56-381 (393)
72 2z9v_A Aspartate aminotransfer 99.4 1.5E-11 5E-16 136.5 24.2 279 448-760 47-369 (392)
73 1m32_A 2-aminoethylphosphonate 99.4 6.5E-12 2.2E-16 137.2 20.4 203 144-467 83-292 (366)
74 3lvm_A Cysteine desulfurase; s 99.4 4.3E-11 1.5E-15 134.3 27.6 269 448-761 73-398 (423)
75 3hbx_A GAD 1, glutamate decarb 99.4 1.3E-12 4.5E-17 152.1 15.3 158 446-615 98-301 (502)
76 1qz9_A Kynureninase; kynurenin 99.4 2.2E-11 7.6E-16 136.3 24.5 285 17-467 28-335 (416)
77 3tqx_A 2-amino-3-ketobutyrate 99.4 5.9E-11 2E-15 131.7 27.3 87 144-235 129-215 (399)
78 2ch1_A 3-hydroxykynurenine tra 99.4 3E-11 1E-15 134.2 24.9 281 446-760 54-381 (396)
79 1m32_A 2-aminoethylphosphonate 99.4 3.2E-11 1.1E-15 131.7 24.2 263 464-759 59-362 (366)
80 1v72_A Aldolase; PLP-dependent 99.4 1.8E-12 6.3E-17 141.4 13.3 156 28-235 19-183 (356)
81 3m5u_A Phosphoserine aminotran 99.4 5.3E-13 1.8E-17 149.4 9.0 262 26-465 13-287 (361)
82 1elu_A L-cysteine/L-cystine C- 99.4 2.6E-11 9E-16 134.0 22.4 286 437-758 53-388 (390)
83 2fnu_A Aminotransferase; prote 99.4 7.2E-12 2.5E-16 137.9 17.7 83 144-235 76-158 (375)
84 1rv3_A Serine hydroxymethyltra 99.4 8.6E-12 2.9E-16 144.4 19.1 275 29-466 56-350 (483)
85 2dgk_A GAD-beta, GADB, glutama 99.4 4.6E-12 1.6E-16 144.9 16.2 150 446-610 84-281 (452)
86 3vax_A Putative uncharacterize 99.3 1.9E-11 6.4E-16 136.0 19.1 275 447-759 67-397 (400)
87 2fnu_A Aminotransferase; prote 99.3 2.8E-11 9.5E-16 133.2 19.1 278 447-760 36-370 (375)
88 1wyu_A Glycine dehydrogenase ( 99.3 1.1E-10 3.7E-15 132.9 24.2 228 508-758 152-436 (438)
89 1eg5_A Aminotransferase; PLP-d 99.3 3.8E-10 1.3E-14 124.2 27.3 271 446-760 47-374 (384)
90 2bkw_A Alanine-glyoxylate amin 99.3 7.6E-11 2.6E-15 130.0 21.8 266 463-759 61-381 (385)
91 3f0h_A Aminotransferase; RER07 99.3 6.6E-11 2.3E-15 130.4 20.2 278 447-759 56-371 (376)
92 1v72_A Aldolase; PLP-dependent 99.3 3.1E-11 1.1E-15 131.7 16.8 258 447-759 47-350 (356)
93 1j32_A Aspartate aminotransfer 99.3 1.2E-10 4E-15 129.4 21.8 160 30-238 45-209 (388)
94 2w8t_A SPT, serine palmitoyltr 99.3 1.6E-09 5.5E-14 122.7 31.3 88 144-238 150-237 (427)
95 3cai_A Possible aminotransfera 99.3 4.4E-11 1.5E-15 133.5 17.5 272 447-758 73-405 (406)
96 3dzz_A Putative pyridoxal 5'-p 99.3 1.6E-10 5.6E-15 127.8 21.9 160 29-238 41-206 (391)
97 1b9h_A AHBA synthase, protein 99.3 1.7E-10 6E-15 128.1 21.2 83 144-235 80-163 (388)
98 2a7v_A Serine hydroxymethyltra 99.3 1.1E-10 3.7E-15 135.7 20.1 158 29-234 66-240 (490)
99 2c81_A Glutamine-2-deoxy-scyll 99.3 7.7E-11 2.6E-15 132.8 17.6 84 144-236 84-168 (418)
100 3uwc_A Nucleotide-sugar aminot 99.2 6.9E-11 2.4E-15 130.4 15.9 83 144-235 80-162 (374)
101 2cb1_A O-acetyl homoserine sul 99.2 2.5E-10 8.5E-15 129.0 20.8 81 144-236 97-181 (412)
102 3n0l_A Serine hydroxymethyltra 99.2 4.2E-10 1.4E-14 125.8 21.8 236 51-465 65-306 (417)
103 3ke3_A Putative serine-pyruvat 99.2 1.8E-10 6.1E-15 128.5 18.5 275 449-760 41-374 (379)
104 3frk_A QDTB; aminotransferase, 99.2 7.9E-11 2.7E-15 130.4 15.5 83 144-235 78-161 (373)
105 3b8x_A WBDK, pyridoxamine 5-ph 99.2 1.1E-09 3.6E-14 122.2 24.5 84 143-235 81-165 (390)
106 2e7j_A SEP-tRNA:Cys-tRNA synth 99.2 3.2E-10 1.1E-14 124.6 19.9 266 447-760 57-368 (371)
107 3dr4_A Putative perosamine syn 99.2 1.1E-10 3.9E-15 129.9 15.7 273 447-758 60-389 (391)
108 1b9h_A AHBA synthase, protein 99.2 1.2E-09 4.2E-14 121.3 23.6 275 448-759 43-385 (388)
109 2x3l_A ORN/Lys/Arg decarboxyla 99.2 4.1E-11 1.4E-15 137.3 11.9 84 144-237 98-187 (446)
110 1qz9_A Kynureninase; kynurenin 99.2 2.6E-09 9E-14 119.4 25.9 273 447-760 75-400 (416)
111 3dr4_A Putative perosamine syn 99.2 1.9E-10 6.6E-15 128.0 16.6 83 144-235 98-181 (391)
112 3qhx_A Cystathionine gamma-syn 99.2 2.7E-10 9.1E-15 128.2 17.4 81 144-235 107-191 (392)
113 1c4k_A Protein (ornithine deca 99.2 1.1E-10 3.8E-15 141.5 15.3 211 144-467 215-447 (730)
114 1svv_A Threonine aldolase; str 99.2 6.8E-10 2.3E-14 121.0 19.9 259 447-759 53-355 (359)
115 2vi8_A Serine hydroxymethyltra 99.2 3.1E-10 1.1E-14 126.3 17.3 235 51-466 63-305 (405)
116 3frk_A QDTB; aminotransferase, 99.2 1.7E-10 6E-15 127.6 14.9 270 447-759 40-365 (373)
117 1gd9_A Aspartate aminotransfer 99.2 1.7E-09 5.8E-14 120.0 22.9 160 30-238 41-206 (389)
118 1o69_A Aminotransferase; struc 99.2 2.3E-09 7.9E-14 120.0 24.1 280 447-759 36-384 (394)
119 3l8a_A METC, putative aminotra 99.2 8.9E-10 3E-14 124.3 20.3 160 29-238 75-240 (421)
120 2c81_A Glutamine-2-deoxy-scyll 99.2 7.2E-10 2.5E-14 124.8 19.6 281 448-760 47-412 (418)
121 3nra_A Aspartate aminotransfer 99.2 4.2E-10 1.4E-14 125.4 17.4 141 51-238 76-225 (407)
122 3a9z_A Selenocysteine lyase; P 99.2 2.9E-09 1E-13 120.0 24.1 286 447-760 65-426 (432)
123 3nyt_A Aminotransferase WBPE; 99.2 2.7E-10 9.2E-15 126.1 15.3 83 144-235 77-160 (367)
124 3uwc_A Nucleotide-sugar aminot 99.2 2.1E-10 7.2E-15 126.5 14.3 271 447-759 42-368 (374)
125 2dkj_A Serine hydroxymethyltra 99.1 4.3E-10 1.5E-14 125.3 16.8 236 51-466 63-306 (407)
126 1xi9_A Putative transaminase; 99.1 1.1E-09 3.6E-14 122.9 19.8 160 30-238 56-220 (406)
127 2gb3_A Aspartate aminotransfer 99.1 6.5E-10 2.2E-14 124.8 18.1 157 30-237 58-219 (409)
128 2rfv_A Methionine gamma-lyase; 99.1 1.8E-09 6.2E-14 121.0 21.0 81 144-235 105-189 (398)
129 1o69_A Aminotransferase; struc 99.1 1.6E-09 5.6E-14 121.2 20.6 86 144-235 74-159 (394)
130 1mdo_A ARNB aminotransferase; 99.1 2.6E-09 9E-14 118.5 21.3 281 447-759 43-383 (393)
131 2oga_A Transaminase; PLP-depen 99.1 1.4E-09 4.9E-14 121.7 18.9 83 144-235 105-188 (399)
132 2c0r_A PSAT, phosphoserine ami 99.1 8E-10 2.7E-14 121.6 16.4 267 19-465 5-289 (362)
133 1o4s_A Aspartate aminotransfer 99.1 1.5E-09 5.1E-14 121.1 18.7 159 30-237 56-219 (389)
134 2ctz_A O-acetyl-L-homoserine s 99.1 1.3E-09 4.5E-14 123.7 18.3 80 144-234 99-183 (421)
135 3b8x_A WBDK, pyridoxamine 5-ph 99.1 5.3E-09 1.8E-13 116.5 22.5 280 448-755 39-389 (390)
136 4dq6_A Putative pyridoxal phos 99.1 2.7E-09 9.2E-14 118.0 19.6 158 29-238 46-210 (391)
137 2po3_A 4-dehydrase; external a 99.1 1.1E-08 3.8E-13 115.4 24.9 83 144-235 92-175 (424)
138 1gc0_A Methionine gamma-lyase; 99.1 1E-09 3.5E-14 123.3 16.0 81 144-235 106-190 (398)
139 2vyc_A Biodegradative arginine 99.1 1.6E-09 5.6E-14 132.1 19.1 259 468-762 226-605 (755)
140 3g0t_A Putative aminotransfera 99.1 5.3E-09 1.8E-13 117.9 21.9 167 29-238 58-228 (437)
141 1u08_A Hypothetical aminotrans 99.1 2.5E-09 8.7E-14 118.6 18.8 137 53-237 67-208 (386)
142 2o0r_A RV0858C (N-succinyldiam 99.1 2.9E-09 9.8E-14 119.5 18.8 161 30-238 40-206 (411)
143 1c7n_A Cystalysin; transferase 99.1 4.9E-09 1.7E-13 116.7 20.5 137 55-238 68-210 (399)
144 3euc_A Histidinol-phosphate am 99.1 5.6E-09 1.9E-13 114.9 20.6 88 144-236 111-203 (367)
145 3ri6_A O-acetylhomoserine sulf 99.1 2.3E-09 8E-14 122.5 17.9 81 144-235 123-207 (430)
146 2zc0_A Alanine glyoxylate tran 99.1 8.6E-09 2.9E-13 115.0 21.8 142 53-237 75-220 (407)
147 1fc4_A 2-amino-3-ketobutyrate 99.0 6.2E-09 2.1E-13 116.0 20.4 89 144-237 131-220 (401)
148 2oga_A Transaminase; PLP-depen 99.0 6.9E-09 2.4E-13 116.2 20.7 272 447-760 67-394 (399)
149 3kax_A Aminotransferase, class 99.0 4.1E-09 1.4E-13 116.2 18.0 159 29-238 38-202 (383)
150 1qgn_A Protein (cystathionine 99.0 2.9E-09 1E-13 122.3 17.3 82 144-235 155-240 (445)
151 3cq5_A Histidinol-phosphate am 99.0 4.2E-08 1.4E-12 108.4 25.9 89 144-237 118-206 (369)
152 3dzz_A Putative pyridoxal 5'-p 99.0 3.6E-09 1.2E-13 117.0 17.3 266 448-760 71-387 (391)
153 2bwn_A 5-aminolevulinate synth 99.0 1.5E-08 5E-13 113.0 22.3 85 144-235 134-218 (401)
154 3kki_A CAI-1 autoinducer synth 99.0 9.2E-09 3.2E-13 115.3 20.8 84 144-237 145-228 (409)
155 3gbx_A Serine hydroxymethyltra 99.0 6.6E-09 2.3E-13 116.0 19.5 84 144-234 118-206 (420)
156 1bw0_A TAT, protein (tyrosine 99.0 1E-08 3.5E-13 114.9 21.1 87 144-236 130-221 (416)
157 1w23_A Phosphoserine aminotran 99.0 1.2E-09 4E-14 119.7 12.9 161 21-234 6-175 (360)
158 1jg8_A L-ALLO-threonine aldola 99.0 2.7E-09 9.3E-14 116.3 15.5 243 468-760 58-344 (347)
159 1v2d_A Glutamine aminotransfer 99.0 2.8E-09 9.7E-14 118.0 15.8 89 144-238 104-198 (381)
160 3ly1_A Putative histidinol-pho 99.0 2.4E-08 8.1E-13 109.1 22.7 90 144-237 94-185 (354)
161 2c0r_A PSAT, phosphoserine ami 99.0 3E-09 1E-13 117.0 15.6 271 447-759 53-358 (362)
162 3ju7_A Putative PLP-dependent 99.0 5.7E-08 1.9E-12 108.7 25.9 83 144-234 80-164 (377)
163 3dyd_A Tyrosine aminotransfera 99.0 7.2E-09 2.5E-13 117.3 18.7 89 144-238 144-237 (427)
164 2fyf_A PSAT, phosphoserine ami 99.0 1.3E-09 4.4E-14 122.0 12.4 261 28-466 50-324 (398)
165 1d2f_A MALY protein; aminotran 99.0 1.5E-08 5.3E-13 112.4 21.1 89 144-237 113-207 (390)
166 3aow_A Putative uncharacterize 99.0 7.5E-07 2.5E-11 101.8 35.4 93 144-237 166-262 (448)
167 2fq6_A Cystathionine beta-lyas 99.0 8.1E-09 2.8E-13 117.4 18.9 81 144-235 123-209 (415)
168 1mdo_A ARNB aminotransferase; 99.0 9.8E-09 3.3E-13 113.9 18.7 83 144-235 81-164 (393)
169 3n75_A LDC, lysine decarboxyla 99.0 5E-09 1.7E-13 126.5 17.5 92 143-238 236-337 (715)
170 2fyf_A PSAT, phosphoserine ami 99.0 7.6E-09 2.6E-13 115.7 17.9 272 447-759 82-395 (398)
171 3ecd_A Serine hydroxymethyltra 99.0 1.1E-08 3.7E-13 114.4 18.9 84 144-234 120-209 (425)
172 3a2b_A Serine palmitoyltransfe 99.0 2.1E-08 7.3E-13 111.6 21.0 85 144-235 129-213 (398)
173 3euc_A Histidinol-phosphate am 99.0 8.7E-09 3E-13 113.3 17.6 253 448-759 72-365 (367)
174 2z61_A Probable aspartate amin 99.0 2.4E-08 8.3E-13 110.0 21.2 152 30-237 44-195 (370)
175 2po3_A 4-dehydrase; external a 99.0 4.4E-08 1.5E-12 110.5 23.6 272 448-760 57-384 (424)
176 3acz_A Methionine gamma-lyase; 99.0 1E-08 3.6E-13 114.9 17.6 82 144-236 100-185 (389)
177 3ffh_A Histidinol-phosphate am 99.0 4E-08 1.4E-12 107.9 21.9 89 144-238 110-200 (363)
178 3tcm_A Alanine aminotransferas 99.0 4.2E-08 1.4E-12 113.9 23.2 166 32-238 110-283 (500)
179 3a2b_A Serine palmitoyltransfe 99.0 3.6E-08 1.2E-12 109.7 21.8 257 448-760 93-390 (398)
180 1e5e_A MGL, methionine gamma-l 98.9 2.7E-08 9.2E-13 112.3 20.9 82 144-236 103-189 (404)
181 3ftb_A Histidinol-phosphate am 98.9 3.1E-08 1.1E-12 108.3 20.6 87 145-238 101-190 (361)
182 3h14_A Aminotransferase, class 98.9 2.7E-08 9.1E-13 110.6 20.2 157 30-238 46-207 (391)
183 1w23_A Phosphoserine aminotran 98.9 1.2E-08 4.1E-13 111.6 17.0 273 448-759 53-357 (360)
184 1j32_A Aspartate aminotransfer 98.9 1.1E-08 3.7E-13 113.5 16.8 247 463-760 92-385 (388)
185 3ffh_A Histidinol-phosphate am 98.9 8.7E-08 3E-12 105.1 23.7 250 449-758 73-362 (363)
186 3lws_A Aromatic amino acid bet 98.9 6.2E-09 2.1E-13 114.1 14.2 161 16-234 10-178 (357)
187 2vi8_A Serine hydroxymethyltra 98.9 2.9E-08 1E-12 110.3 19.8 244 470-759 92-384 (405)
188 2cb1_A O-acetyl homoserine sul 98.9 1.9E-08 6.5E-13 113.5 18.5 262 450-757 63-411 (412)
189 3h7f_A Serine hydroxymethyltra 98.9 3.4E-08 1.2E-12 112.7 20.8 153 30-234 58-222 (447)
190 1ax4_A Tryptophanase; tryptoph 98.9 5.5E-08 1.9E-12 110.8 22.3 277 449-760 82-439 (467)
191 1bs0_A Protein (8-amino-7-oxon 98.9 4E-08 1.4E-12 108.7 20.6 84 144-235 125-208 (384)
192 3fdb_A Beta C-S lyase, putativ 98.9 7.8E-08 2.7E-12 105.8 22.7 156 29-237 37-195 (377)
193 3piu_A 1-aminocyclopropane-1-c 98.9 2.4E-08 8.2E-13 112.9 18.9 145 54-238 87-237 (435)
194 3i16_A Aluminum resistance pro 98.9 2.1E-08 7.2E-13 114.5 18.4 88 144-235 117-222 (427)
195 1rv3_A Serine hydroxymethyltra 98.9 2.2E-08 7.4E-13 115.9 18.7 274 451-760 98-429 (483)
196 1ax4_A Tryptophanase; tryptoph 98.9 2.2E-08 7.4E-13 114.1 18.4 87 145-234 125-226 (467)
197 1cs1_A CGS, protein (cystathio 98.9 3E-08 1E-12 110.4 18.8 83 144-237 93-179 (386)
198 2zyj_A Alpha-aminodipate amino 98.9 3.1E-08 1E-12 110.5 18.7 248 463-762 93-393 (397)
199 1iay_A ACC synthase 2, 1-amino 98.9 5.5E-08 1.9E-12 109.6 20.9 143 55-237 85-233 (428)
200 1jg8_A L-ALLO-threonine aldola 98.9 4E-09 1.4E-13 115.0 11.2 90 144-234 79-175 (347)
201 3ndn_A O-succinylhomoserine su 98.9 2.1E-08 7.2E-13 113.9 17.3 80 144-234 122-205 (414)
202 2x3l_A ORN/Lys/Arg decarboxyla 98.9 5.4E-09 1.8E-13 119.8 12.5 236 468-760 77-351 (446)
203 3bb8_A CDP-4-keto-6-deoxy-D-gl 98.9 4.6E-08 1.6E-12 111.0 20.0 286 447-759 66-433 (437)
204 2x5d_A Probable aminotransfera 98.9 6.6E-08 2.2E-12 108.4 21.0 139 53-238 75-218 (412)
205 1yiz_A Kynurenine aminotransfe 98.9 2.4E-08 8.3E-13 112.4 17.5 137 54-238 78-228 (429)
206 3bb8_A CDP-4-keto-6-deoxy-D-gl 98.9 1.1E-07 3.8E-12 107.9 22.8 84 143-235 111-195 (437)
207 3ly1_A Putative histidinol-pho 98.9 6.2E-08 2.1E-12 105.8 19.7 254 447-759 55-349 (354)
208 3nyt_A Aminotransferase WBPE; 98.9 7.1E-09 2.4E-13 114.6 12.3 267 447-758 39-360 (367)
209 1fc4_A 2-amino-3-ketobutyrate 98.9 1.6E-07 5.5E-12 104.4 23.4 259 447-760 94-395 (401)
210 4dq6_A Putative pyridoxal phos 98.9 6E-08 2.1E-12 107.1 19.1 261 447-759 75-390 (391)
211 2dkj_A Serine hydroxymethyltra 98.9 2.7E-08 9.4E-13 110.6 16.2 247 470-760 92-386 (407)
212 2gb3_A Aspartate aminotransfer 98.9 3.5E-08 1.2E-12 110.6 17.1 243 463-760 104-400 (409)
213 3ftb_A Histidinol-phosphate am 98.9 1.5E-07 5.2E-12 102.9 21.8 250 448-759 66-358 (361)
214 3nmy_A Xometc, cystathionine g 98.8 2.8E-08 9.7E-13 112.3 16.3 81 144-235 107-192 (400)
215 3jzl_A Putative cystathionine 98.8 5.3E-08 1.8E-12 110.6 18.6 86 144-235 103-205 (409)
216 1bs0_A Protein (8-amino-7-oxon 98.8 1.6E-07 5.6E-12 103.8 22.1 239 469-758 105-383 (384)
217 3get_A Histidinol-phosphate am 98.8 4.8E-08 1.7E-12 107.3 17.7 86 144-236 108-196 (365)
218 1v2d_A Glutamine aminotransfer 98.8 4E-08 1.4E-12 108.8 17.1 254 451-759 69-368 (381)
219 1c4k_A Protein (ornithine deca 98.8 2.4E-08 8.1E-13 121.3 16.1 277 451-762 181-566 (730)
220 3l8a_A METC, putative aminotra 98.8 2.7E-08 9.3E-13 112.1 15.5 265 448-759 105-419 (421)
221 1vp4_A Aminotransferase, putat 98.8 8.1E-08 2.8E-12 108.4 19.3 93 144-237 135-233 (425)
222 3ju7_A Putative PLP-dependent 98.8 9E-08 3.1E-12 107.1 19.3 257 468-760 58-373 (377)
223 3kki_A CAI-1 autoinducer synth 98.8 1.7E-07 5.9E-12 104.9 21.6 236 470-760 126-402 (409)
224 1gd9_A Aspartate aminotransfer 98.8 6.7E-08 2.3E-12 107.1 18.1 244 464-759 90-383 (389)
225 3piu_A 1-aminocyclopropane-1-c 98.8 1.9E-07 6.6E-12 105.5 22.1 255 463-760 113-430 (435)
226 2zc0_A Alanine glyoxylate tran 98.8 7.2E-08 2.5E-12 107.5 18.3 249 463-760 100-402 (407)
227 2ez2_A Beta-tyrosinase, tyrosi 98.8 9.9E-08 3.4E-12 108.4 19.5 88 146-235 116-218 (456)
228 1pff_A Methionine gamma-lyase; 98.8 7.3E-08 2.5E-12 104.5 17.5 80 144-234 39-123 (331)
229 3nra_A Aspartate aminotransfer 98.8 5E-08 1.7E-12 108.5 16.3 247 463-760 104-403 (407)
230 3pj0_A LMO0305 protein; struct 98.8 7.6E-08 2.6E-12 105.3 17.3 83 144-234 91-180 (359)
231 1b5p_A Protein (aspartate amin 98.8 1.9E-07 6.4E-12 103.8 20.4 135 54-236 69-208 (385)
232 3e2y_A Kynurenine-oxoglutarate 98.8 5.6E-08 1.9E-12 108.4 16.0 163 29-238 37-213 (410)
233 2o1b_A Aminotransferase, class 98.8 1.2E-07 4E-12 106.4 18.7 138 53-237 85-226 (404)
234 2oqx_A Tryptophanase; lyase, p 98.8 6.5E-08 2.2E-12 110.2 16.8 170 19-234 42-226 (467)
235 3fsl_A Aromatic-amino-acid ami 98.8 1.5E-07 5.3E-12 104.3 19.4 91 145-238 124-219 (397)
236 3if2_A Aminotransferase; YP_26 98.8 1.6E-06 5.5E-11 97.9 27.9 72 162-236 171-250 (444)
237 1o4s_A Aspartate aminotransfer 98.8 6.1E-08 2.1E-12 108.0 15.7 241 463-759 103-386 (389)
238 2dou_A Probable N-succinyldiam 98.8 5.2E-07 1.8E-11 99.5 22.9 161 30-237 40-203 (376)
239 1xi9_A Putative transaminase; 98.8 1.8E-07 6E-12 104.7 19.3 248 463-760 103-401 (406)
240 3lws_A Aromatic amino acid bet 98.8 2.6E-07 8.8E-12 101.1 20.1 242 469-758 68-355 (357)
241 3op7_A Aminotransferase class 98.8 9.9E-08 3.4E-12 105.2 16.8 88 144-237 107-199 (375)
242 3kax_A Aminotransferase, class 98.8 2.5E-07 8.4E-12 101.9 20.0 262 448-759 68-382 (383)
243 1vef_A Acetylornithine/acetyl- 98.8 2E-07 6.7E-12 103.7 19.3 82 144-236 133-230 (395)
244 3cq5_A Histidinol-phosphate am 98.8 9.7E-07 3.3E-11 97.4 24.7 236 463-759 94-365 (369)
245 2ez2_A Beta-tyrosinase, tyrosi 98.8 5E-07 1.7E-11 102.6 22.9 267 450-760 82-429 (456)
246 3pj0_A LMO0305 protein; struct 98.8 4.5E-07 1.5E-11 99.2 21.7 243 469-758 69-358 (359)
247 3get_A Histidinol-phosphate am 98.8 4.5E-07 1.5E-11 99.5 21.7 247 451-759 73-364 (365)
248 3qhx_A Cystathionine gamma-syn 98.8 1.1E-07 3.8E-12 106.8 17.1 250 448-755 71-391 (392)
249 1n8p_A Cystathionine gamma-lya 98.8 2E-08 6.7E-13 113.0 10.8 80 144-235 95-182 (393)
250 3n0l_A Serine hydroxymethyltra 98.8 9.3E-07 3.2E-11 98.5 24.3 262 451-760 79-387 (417)
251 1iay_A ACC synthase 2, 1-amino 98.7 4.7E-07 1.6E-11 102.0 21.9 254 463-759 110-424 (428)
252 3g0t_A Putative aminotransfera 98.7 4.4E-08 1.5E-12 110.3 13.4 265 463-759 107-434 (437)
253 3fvs_A Kynurenine--oxoglutarat 98.7 9.2E-08 3.1E-12 107.2 15.9 163 29-238 42-220 (422)
254 3ht4_A Aluminum resistance pro 98.7 9.4E-08 3.2E-12 109.2 16.1 88 144-237 109-213 (431)
255 2a7v_A Serine hydroxymethyltra 98.7 7.1E-07 2.4E-11 103.6 23.6 270 451-764 108-443 (490)
256 1fg7_A Histidinol phosphate am 98.7 4.9E-07 1.7E-11 99.6 21.1 237 463-758 77-354 (356)
257 3gbx_A Serine hydroxymethyltra 98.7 3.6E-07 1.2E-11 101.9 20.2 248 470-759 99-393 (420)
258 1vp4_A Aminotransferase, putat 98.7 2.4E-07 8.1E-12 104.6 18.7 250 463-760 111-416 (425)
259 3b46_A Aminotransferase BNA3; 98.7 1.1E-07 3.6E-12 108.4 15.8 88 144-237 144-246 (447)
260 2oqx_A Tryptophanase; lyase, p 98.7 7.5E-07 2.6E-11 101.4 22.8 277 449-760 80-440 (467)
261 1lc5_A COBD, L-threonine-O-3-p 98.7 2.7E-07 9.1E-12 101.6 18.3 87 145-237 101-191 (364)
262 1bw0_A TAT, protein (tyrosine 98.7 5.1E-07 1.7E-11 101.0 20.6 254 463-760 106-411 (416)
263 3ecd_A Serine hydroxymethyltra 98.7 6E-07 2.1E-11 100.2 21.1 249 468-760 99-395 (425)
264 3hvy_A Cystathionine beta-lyas 98.7 3.1E-07 1.1E-11 104.9 18.9 71 160-235 146-222 (427)
265 4f4e_A Aromatic-amino-acid ami 98.7 3.7E-07 1.2E-11 102.8 19.4 91 145-238 146-241 (420)
266 3ele_A Amino transferase; RER0 98.7 3.3E-07 1.1E-11 101.8 18.7 137 53-237 76-223 (398)
267 1gc0_A Methionine gamma-lyase; 98.7 4.7E-07 1.6E-11 101.5 19.9 236 468-758 85-397 (398)
268 2zyj_A Alpha-aminodipate amino 98.7 2.5E-07 8.5E-12 103.1 17.5 90 144-238 117-209 (397)
269 3ihj_A Alanine aminotransferas 98.7 6.4E-07 2.2E-11 104.0 21.6 94 144-238 183-281 (498)
270 3fdb_A Beta C-S lyase, putativ 98.7 4.6E-07 1.6E-11 99.6 19.4 244 463-759 83-373 (377)
271 1yaa_A Aspartate aminotransfer 98.7 1.8E-07 6.2E-12 104.7 16.4 91 145-238 127-222 (412)
272 2rfv_A Methionine gamma-lyase; 98.7 2.3E-07 8E-12 103.8 17.0 239 468-758 84-396 (398)
273 1ibj_A CBL, cystathionine beta 98.7 1.4E-07 4.9E-12 108.7 15.4 80 144-234 173-256 (464)
274 1cs1_A CGS, protein (cystathio 98.7 1.2E-06 4E-11 97.5 22.2 250 449-759 58-384 (386)
275 1c7n_A Cystalysin; transferase 98.7 1.6E-07 5.4E-12 104.5 14.9 250 463-760 91-391 (399)
276 3cog_A Cystathionine gamma-lya 98.7 2.3E-07 7.8E-12 104.8 16.1 82 144-236 107-193 (403)
277 3meb_A Aspartate aminotransfer 98.7 1.2E-06 4E-11 100.0 22.0 91 145-238 148-248 (448)
278 2bwn_A 5-aminolevulinate synth 98.7 1E-06 3.6E-11 98.0 21.0 222 508-759 134-397 (401)
279 3jtx_A Aminotransferase; NP_28 98.6 8E-07 2.7E-11 98.5 19.3 88 144-237 122-213 (396)
280 3h14_A Aminotransferase, class 98.6 6.1E-07 2.1E-11 99.6 18.2 243 463-760 93-380 (391)
281 3p1t_A Putative histidinol-pho 98.6 2.5E-06 8.4E-11 92.2 22.4 84 144-236 92-175 (337)
282 1fg7_A Histidinol phosphate am 98.6 1.1E-06 3.6E-11 96.9 19.7 86 144-236 102-189 (356)
283 3dyd_A Tyrosine aminotransfera 98.6 9.7E-07 3.3E-11 99.8 19.8 255 463-760 120-422 (427)
284 2o0r_A RV0858C (N-succinyldiam 98.6 7.1E-08 2.4E-12 108.1 10.4 248 463-759 88-393 (411)
285 1u08_A Hypothetical aminotrans 98.6 2.1E-07 7.3E-12 103.1 13.8 244 463-757 93-385 (386)
286 3ezs_A Aminotransferase ASPB; 98.6 6.7E-07 2.3E-11 98.4 17.7 137 55-238 61-200 (376)
287 1d2f_A MALY protein; aminotran 98.6 5.6E-07 1.9E-11 99.8 17.1 249 463-759 89-386 (390)
288 3p1t_A Putative histidinol-pho 98.6 1.1E-06 3.9E-11 94.9 19.0 245 450-759 58-334 (337)
289 3op7_A Aminotransferase class 98.6 1.1E-06 3.7E-11 96.8 19.1 261 448-760 68-369 (375)
290 1ajs_A Aspartate aminotransfer 98.6 9.7E-07 3.3E-11 98.6 18.8 91 145-238 133-229 (412)
291 2z61_A Probable aspartate amin 98.6 7.7E-07 2.6E-11 98.0 16.5 235 463-759 91-368 (370)
292 1s0a_A Adenosylmethionine-8-am 98.6 4.8E-06 1.7E-10 93.8 23.3 91 144-237 137-251 (429)
293 2eh6_A Acoat, acetylornithine 98.6 2.2E-06 7.5E-11 94.2 19.8 55 177-237 160-218 (375)
294 3ele_A Amino transferase; RER0 98.6 8.3E-07 2.8E-11 98.6 16.5 244 463-760 101-394 (398)
295 1pff_A Methionine gamma-lyase; 98.6 7.6E-07 2.6E-11 96.5 15.8 248 448-757 3-329 (331)
296 2ctz_A O-acetyl-L-homoserine s 98.6 9.4E-07 3.2E-11 100.1 17.1 232 448-719 63-360 (421)
297 3hdo_A Histidinol-phosphate am 98.5 1.1E-06 3.7E-11 96.6 16.6 83 144-236 108-190 (360)
298 1b5p_A Protein (aspartate amin 98.5 1.5E-06 5.3E-11 96.4 17.7 244 463-758 93-381 (385)
299 3ruy_A Ornithine aminotransfer 98.5 2.9E-06 1E-10 94.1 19.5 54 178-237 171-228 (392)
300 2ord_A Acoat, acetylornithine 98.5 1.3E-06 4.5E-11 97.2 16.6 257 446-759 85-394 (397)
301 3h7f_A Serine hydroxymethyltra 98.5 4.1E-06 1.4E-10 95.5 20.8 265 447-760 94-412 (447)
302 3ez1_A Aminotransferase MOCR f 98.5 2.7E-06 9.1E-11 95.5 18.5 269 451-760 78-413 (423)
303 2x5f_A Aspartate_tyrosine_phen 98.5 3.5E-06 1.2E-10 94.8 19.2 92 144-238 139-240 (430)
304 3hdo_A Histidinol-phosphate am 98.5 2.4E-06 8.1E-11 93.8 17.3 246 450-759 72-352 (360)
305 2q7w_A Aspartate aminotransfer 98.5 1.8E-06 6.3E-11 95.6 16.5 91 145-238 123-218 (396)
306 3g7q_A Valine-pyruvate aminotr 98.5 2.5E-05 8.6E-10 87.0 25.9 143 49-236 71-224 (417)
307 1yiz_A Kynurenine aminotransfe 98.5 1.7E-06 5.8E-11 97.3 16.4 253 463-759 103-426 (429)
308 1sff_A 4-aminobutyrate aminotr 98.5 1.1E-05 3.7E-10 90.4 22.7 271 447-760 88-422 (426)
309 2dou_A Probable N-succinyldiam 98.5 2.8E-06 9.6E-11 93.7 17.4 242 463-758 89-374 (376)
310 7aat_A Aspartate aminotransfer 98.5 9.6E-07 3.3E-11 98.3 13.7 184 13-238 31-221 (401)
311 1qgn_A Protein (cystathionine 98.5 2.4E-06 8E-11 98.1 17.1 234 469-759 135-442 (445)
312 2x5d_A Probable aminotransfera 98.4 1.9E-06 6.4E-11 96.5 15.8 247 463-760 101-396 (412)
313 1s0a_A Adenosylmethionine-8-am 98.4 1.4E-05 4.9E-10 89.9 23.0 270 445-759 88-421 (429)
314 2ord_A Acoat, acetylornithine 98.4 2.8E-06 9.6E-11 94.5 16.9 83 144-237 131-229 (397)
315 1vef_A Acetylornithine/acetyl- 98.4 4.3E-06 1.5E-10 92.8 18.2 252 446-759 90-394 (395)
316 2x5f_A Aspartate_tyrosine_phen 98.4 5.4E-06 1.8E-10 93.4 19.3 246 464-760 116-427 (430)
317 3fkd_A L-threonine-O-3-phospha 98.4 9.4E-06 3.2E-10 88.5 20.6 251 449-759 56-339 (350)
318 1sff_A 4-aminobutyrate aminotr 98.4 2E-05 6.8E-10 88.2 23.7 93 144-237 131-245 (426)
319 3dxv_A Alpha-amino-epsilon-cap 98.4 1.3E-05 4.5E-10 90.5 22.2 164 29-237 60-247 (439)
320 3fkd_A L-threonine-O-3-phospha 98.4 3.2E-06 1.1E-10 92.3 16.5 78 145-236 92-171 (350)
321 1lc5_A COBD, L-threonine-O-3-p 98.4 6.2E-06 2.1E-10 90.6 18.8 249 451-759 67-357 (364)
322 3qgu_A LL-diaminopimelate amin 98.4 1.2E-05 4.2E-10 91.0 21.6 85 145-238 158-255 (449)
323 2o1b_A Aminotransferase, class 98.4 1.7E-06 5.7E-11 97.0 14.1 244 463-759 111-400 (404)
324 2aeu_A Hypothetical protein MJ 98.4 2.9E-06 9.9E-11 94.5 15.9 77 145-235 101-182 (374)
325 3tcm_A Alanine aminotransferas 98.4 2.7E-05 9.3E-10 90.2 24.7 257 463-761 159-493 (500)
326 2r2n_A Kynurenine/alpha-aminoa 98.4 2.5E-05 8.5E-10 88.0 23.6 249 463-759 110-421 (425)
327 4adb_A Succinylornithine trans 98.4 7.4E-06 2.5E-10 91.0 19.0 84 142-237 129-229 (406)
328 4adb_A Succinylornithine trans 98.4 7.6E-06 2.6E-10 90.9 18.8 262 446-760 84-398 (406)
329 3ez1_A Aminotransferase MOCR f 98.4 3.8E-06 1.3E-10 94.3 16.1 88 144-236 126-218 (423)
330 1e5e_A MGL, methionine gamma-l 98.4 1E-05 3.4E-10 91.2 19.6 233 468-760 82-393 (404)
331 2eo5_A 419AA long hypothetical 98.4 2.7E-05 9.1E-10 87.7 23.0 256 446-759 89-415 (419)
332 3fvs_A Kynurenine--oxoglutarat 98.4 3.6E-06 1.2E-10 94.1 15.7 249 463-759 93-419 (422)
333 2eh6_A Acoat, acetylornithine 98.4 4E-06 1.4E-10 92.1 15.7 251 447-758 74-374 (375)
334 3hmu_A Aminotransferase, class 98.4 2.6E-05 8.9E-10 89.8 23.2 283 445-770 101-460 (472)
335 3ppl_A Aspartate aminotransfer 98.4 6.4E-06 2.2E-10 92.7 17.6 223 507-760 134-418 (427)
336 3t18_A Aminotransferase class 98.4 1.2E-05 4.1E-10 89.9 19.7 94 144-238 127-231 (413)
337 2pb2_A Acetylornithine/succiny 98.4 2.2E-05 7.6E-10 88.5 22.0 261 446-760 102-416 (420)
338 1z7d_A Ornithine aminotransfer 98.4 2.9E-05 9.9E-10 88.1 22.7 261 446-760 110-427 (433)
339 3rq1_A Aminotransferase class 98.3 9.2E-06 3.1E-10 91.0 18.0 93 144-237 128-231 (418)
340 3ezs_A Aminotransferase ASPB; 98.3 1.6E-05 5.5E-10 87.3 19.7 238 463-759 84-372 (376)
341 2pb2_A Acetylornithine/succiny 98.3 1.3E-05 4.5E-10 90.4 19.3 83 144-237 149-247 (420)
342 3acz_A Methionine gamma-lyase; 98.3 6.3E-06 2.1E-10 92.2 16.4 231 468-755 79-386 (389)
343 2eo5_A 419AA long hypothetical 98.3 9.2E-05 3.1E-09 83.3 25.8 163 30-237 61-258 (419)
344 2r2n_A Kynurenine/alpha-aminoa 98.3 3.3E-05 1.1E-09 87.0 22.1 93 144-237 134-236 (425)
345 1n8p_A Cystathionine gamma-lya 98.3 2.6E-06 8.9E-11 95.7 12.9 236 469-759 76-392 (393)
346 3ruy_A Ornithine aminotransfer 98.3 2.2E-05 7.4E-10 87.0 20.2 87 660-759 302-391 (392)
347 3jtx_A Aminotransferase; NP_28 98.3 1.8E-05 6.1E-10 87.6 19.5 246 463-758 93-394 (396)
348 3ou5_A Serine hydroxymethyltra 98.3 1.3E-05 4.4E-10 91.2 18.3 273 30-465 67-359 (490)
349 3nx3_A Acoat, acetylornithine 98.3 2.2E-05 7.4E-10 87.2 19.8 62 165-237 160-225 (395)
350 3ppl_A Aspartate aminotransfer 98.3 5.6E-06 1.9E-10 93.2 14.9 88 144-237 135-227 (427)
351 3nx3_A Acoat, acetylornithine 98.3 3.5E-05 1.2E-09 85.5 21.1 258 446-759 81-392 (395)
352 2ay1_A Aroat, aromatic amino a 98.3 8.7E-06 3E-10 90.2 16.1 91 145-238 120-215 (394)
353 3i4j_A Aminotransferase, class 98.3 2.6E-05 9E-10 87.8 20.3 278 446-760 75-426 (430)
354 2fq6_A Cystathionine beta-lyas 98.3 1.1E-05 3.7E-10 91.6 16.7 237 468-757 102-413 (415)
355 2oat_A Ornithine aminotransfer 98.3 2.5E-05 8.6E-10 88.9 19.8 85 143-237 169-269 (439)
356 3rq1_A Aminotransferase class 98.3 2.8E-05 9.6E-10 87.0 19.5 246 463-760 104-413 (418)
357 2oat_A Ornithine aminotransfer 98.3 3.8E-05 1.3E-09 87.3 20.9 260 447-759 122-436 (439)
358 1uu1_A Histidinol-phosphate am 98.3 1.2E-05 4E-10 87.5 15.9 78 145-235 100-177 (335)
359 3nnk_A Ureidoglycine-glyoxylat 98.3 2.8E-06 9.6E-11 94.3 11.2 281 447-760 50-388 (411)
360 3n75_A LDC, lysine decarboxyla 98.3 4.4E-05 1.5E-09 92.3 22.1 255 468-760 216-558 (715)
361 3b1d_A Betac-S lyase; HET: PLP 97.5 1.5E-07 5E-12 104.9 0.0 89 145-238 116-210 (392)
362 3dxv_A Alpha-amino-epsilon-cap 98.2 2.2E-05 7.4E-10 88.7 17.6 271 446-760 89-423 (439)
363 3i4j_A Aminotransferase, class 98.2 7.8E-05 2.7E-09 83.9 22.0 72 165-238 159-238 (430)
364 3d6k_A Putative aminotransfera 98.2 2.5E-05 8.4E-10 88.0 17.9 221 508-760 133-416 (422)
365 3a8u_X Omega-amino acid--pyruv 98.2 9.5E-05 3.2E-09 83.8 22.7 283 446-760 96-445 (449)
366 3cog_A Cystathionine gamma-lya 98.2 1.5E-05 5E-10 89.9 15.8 215 508-759 107-399 (403)
367 3e2y_A Kynurenine-oxoglutarate 98.2 8E-06 2.7E-10 90.8 13.4 247 463-757 87-408 (410)
368 3ri6_A O-acetylhomoserine sulf 98.2 2.8E-05 9.7E-10 88.7 18.0 209 469-719 103-369 (430)
369 3ei9_A LL-diaminopimelate amin 98.2 1.8E-05 6E-10 89.2 16.0 84 145-237 145-243 (432)
370 3b46_A Aminotransferase BNA3; 98.2 6.7E-06 2.3E-10 93.6 12.3 252 463-757 120-442 (447)
371 3a8u_X Omega-amino acid--pyruv 98.2 0.0001 3.5E-09 83.5 21.7 93 143-237 144-265 (449)
372 1z7d_A Ornithine aminotransfer 98.2 8E-05 2.7E-09 84.5 20.6 84 144-237 159-258 (433)
373 3ndn_A O-succinylhomoserine su 98.2 2.1E-05 7.2E-10 89.1 15.7 205 468-721 101-355 (414)
374 4hvk_A Probable cysteine desul 98.1 9.1E-05 3.1E-09 80.7 19.9 269 447-760 47-371 (382)
375 1ibj_A CBL, cystathionine beta 98.1 1.2E-05 4E-10 92.7 13.1 213 508-759 173-459 (464)
376 3gju_A Putative aminotransfera 98.1 0.00035 1.2E-08 79.7 25.3 281 445-760 97-454 (460)
377 3dod_A Adenosylmethionine-8-am 98.1 0.00015 5E-09 82.4 22.0 280 446-760 90-441 (448)
378 3f6t_A Aspartate aminotransfer 98.1 7.5E-05 2.6E-09 87.3 20.0 164 29-237 116-290 (533)
379 1uu1_A Histidinol-phosphate am 98.1 7.4E-05 2.5E-09 81.1 18.0 222 463-757 78-333 (335)
380 3tfu_A Adenosylmethionine-8-am 98.1 0.00012 4.1E-09 83.8 20.3 268 446-760 121-451 (457)
381 3i5t_A Aminotransferase; pyrid 98.1 0.0002 6.8E-09 82.5 22.2 281 445-763 99-455 (476)
382 1zod_A DGD, 2,2-dialkylglycine 98.1 0.00014 4.8E-09 81.8 20.3 276 445-760 87-430 (433)
383 3ihj_A Alanine aminotransferas 98.1 0.00032 1.1E-08 81.2 23.5 261 463-762 155-493 (498)
384 4eu1_A Mitochondrial aspartate 98.1 0.00021 7E-09 79.8 21.2 92 144-238 133-229 (409)
385 3zrp_A Serine-pyruvate aminotr 98.0 1.3E-05 4.4E-10 87.8 10.8 277 447-760 39-361 (384)
386 3l44_A Glutamate-1-semialdehyd 98.0 0.00011 3.8E-09 82.7 18.7 57 178-237 188-248 (434)
387 2dr1_A PH1308 protein, 386AA l 98.0 2.3E-05 8E-10 85.9 12.7 282 446-760 56-377 (386)
388 4e77_A Glutamate-1-semialdehyd 98.0 0.00031 1.1E-08 79.0 22.3 57 178-237 186-246 (429)
389 3fq8_A Glutamate-1-semialdehyd 98.0 4.3E-05 1.5E-09 85.9 15.1 57 178-237 185-245 (427)
390 3d6k_A Putative aminotransfera 98.0 7.3E-05 2.5E-09 84.1 16.7 86 144-235 133-223 (422)
391 3k28_A Glutamate-1-semialdehyd 98.0 8.1E-05 2.8E-09 83.9 17.1 57 178-237 186-246 (429)
392 2cjg_A L-lysine-epsilon aminot 98.0 0.00017 5.8E-09 82.2 19.9 89 661-760 352-446 (449)
393 3n5m_A Adenosylmethionine-8-am 98.0 0.00073 2.5E-08 76.6 24.9 56 179-237 201-261 (452)
394 3n5m_A Adenosylmethionine-8-am 98.0 0.00058 2E-08 77.4 24.1 278 445-759 93-449 (452)
395 3oks_A 4-aminobutyrate transam 98.0 0.00028 9.5E-09 80.4 21.3 154 582-759 289-448 (451)
396 3nmy_A Xometc, cystathionine g 98.0 5.5E-05 1.9E-09 85.3 15.1 178 508-719 107-336 (400)
397 4a6r_A Omega transaminase; tra 98.0 0.00021 7.3E-09 81.4 20.0 280 445-763 96-450 (459)
398 2cy8_A D-phgat, D-phenylglycin 98.0 0.00022 7.4E-09 81.0 19.2 57 178-237 187-247 (453)
399 3dod_A Adenosylmethionine-8-am 98.0 0.00043 1.5E-08 78.6 21.6 58 178-238 196-258 (448)
400 3oks_A 4-aminobutyrate transam 98.0 0.00079 2.7E-08 76.7 23.8 178 18-238 61-274 (451)
401 3tfu_A Adenosylmethionine-8-am 97.9 0.00022 7.6E-09 81.6 18.8 64 172-238 213-281 (457)
402 3qgu_A LL-diaminopimelate amin 97.9 0.00016 5.5E-09 81.7 17.4 246 463-759 134-437 (449)
403 3fsl_A Aromatic-amino-acid ami 97.9 4.3E-05 1.5E-09 84.5 12.4 243 463-758 97-396 (397)
404 3asa_A LL-diaminopimelate amin 97.9 6.8E-05 2.3E-09 83.6 13.6 84 145-237 121-208 (400)
405 7aat_A Aspartate aminotransfer 97.9 2.7E-05 9.3E-10 86.5 10.0 241 469-759 102-400 (401)
406 4ffc_A 4-aminobutyrate aminotr 97.9 0.00016 5.4E-09 82.6 16.5 155 582-760 287-447 (453)
407 3l44_A Glutamate-1-semialdehyd 97.9 0.00025 8.7E-09 79.8 18.0 154 582-760 263-428 (434)
408 2ay1_A Aroat, aromatic amino a 97.9 2.3E-05 7.9E-10 86.7 9.2 239 469-758 97-392 (394)
409 3b1d_A Betac-S lyase; HET: PLP 97.1 1.8E-06 6E-11 96.1 0.0 248 463-759 91-390 (392)
410 1zod_A DGD, 2,2-dialkylglycine 97.9 0.00081 2.8E-08 75.5 21.8 60 176-237 186-249 (433)
411 3t18_A Aminotransferase class 97.9 0.00017 6E-09 80.4 16.2 243 463-756 103-408 (413)
412 2epj_A Glutamate-1-semialdehyd 97.9 0.00032 1.1E-08 79.1 18.3 65 165-237 181-249 (434)
413 4ffc_A 4-aminobutyrate aminotr 97.8 0.0006 2E-08 77.8 20.4 167 29-238 81-272 (453)
414 2cjg_A L-lysine-epsilon aminot 97.8 0.00042 1.4E-08 78.9 18.9 71 165-238 194-278 (449)
415 3k28_A Glutamate-1-semialdehyd 97.8 0.00028 9.6E-09 79.5 16.9 153 582-760 261-425 (429)
416 3qm2_A Phosphoserine aminotran 97.8 3.2E-06 1.1E-10 95.2 0.9 278 442-760 70-383 (386)
417 4f4e_A Aromatic-amino-acid ami 97.8 0.00012 4.3E-09 82.0 13.6 245 463-759 119-419 (420)
418 3i16_A Aluminum resistance pro 97.8 0.00049 1.7E-08 78.4 17.9 219 451-720 81-355 (427)
419 3f6t_A Aspartate aminotransfer 97.7 0.00059 2E-08 79.7 17.5 280 463-766 166-529 (533)
420 3ei9_A LL-diaminopimelate amin 97.7 0.00036 1.2E-08 78.4 14.6 151 582-759 261-425 (432)
421 4e77_A Glutamate-1-semialdehyd 97.6 0.0012 4.1E-08 74.2 18.6 264 444-759 94-426 (429)
422 1ajs_A Aspartate aminotransfer 97.6 0.00027 9.2E-09 78.7 13.0 245 469-759 105-408 (412)
423 3hmu_A Aminotransferase, class 97.6 0.001 3.6E-08 76.4 18.2 122 108-238 121-270 (472)
424 1iug_A Putative aspartate amin 97.6 8.6E-05 3E-09 80.3 8.6 273 447-760 38-346 (352)
425 3fq8_A Glutamate-1-semialdehyd 97.6 0.00031 1E-08 78.9 12.8 155 582-760 260-425 (427)
426 2q7w_A Aspartate aminotransfer 97.6 0.00017 5.8E-09 79.6 10.4 236 469-758 100-395 (396)
427 1t3i_A Probable cysteine desul 97.6 0.00028 9.5E-09 78.2 12.2 284 445-760 74-411 (420)
428 3jzl_A Putative cystathionine 97.6 0.00049 1.7E-08 78.0 14.0 220 451-721 67-339 (409)
429 2e7u_A Glutamate-1-semialdehyd 97.6 0.0017 5.9E-08 72.8 18.5 56 178-237 185-244 (424)
430 1ohv_A 4-aminobutyrate aminotr 97.5 0.004 1.4E-07 71.5 20.6 97 649-759 366-468 (472)
431 3ht4_A Aluminum resistance pro 97.5 0.0012 4E-08 75.3 16.0 220 448-720 70-344 (431)
432 3meb_A Aspartate aminotransfer 97.5 0.00023 7.9E-09 80.9 9.9 238 469-760 125-442 (448)
433 3ou5_A Serine hydroxymethyltra 97.5 0.0087 3E-07 68.2 22.3 218 529-763 177-442 (490)
434 3i5t_A Aminotransferase; pyrid 97.5 0.01 3.5E-07 68.1 23.4 58 179-238 207-268 (476)
435 2epj_A Glutamate-1-semialdehyd 97.5 0.0014 4.6E-08 73.9 15.5 156 582-760 264-429 (434)
436 3asa_A LL-diaminopimelate amin 97.4 0.0013 4.3E-08 73.2 14.6 242 463-759 97-390 (400)
437 3gju_A Putative aminotransfera 97.4 0.0057 1.9E-07 69.6 20.3 58 179-238 207-268 (460)
438 2cy8_A D-phgat, D-phenylglycin 97.4 0.0079 2.7E-07 68.1 21.4 264 445-760 99-433 (453)
439 3hvy_A Cystathionine beta-lyas 97.4 0.0032 1.1E-07 71.7 17.9 219 450-720 81-355 (427)
440 4a6r_A Omega transaminase; tra 97.4 0.0038 1.3E-07 71.0 18.4 58 179-238 205-266 (459)
441 1kmj_A Selenocysteine lyase; p 97.4 0.00043 1.5E-08 76.2 9.9 284 446-760 70-403 (406)
442 3ffr_A Phosphoserine aminotran 97.3 0.001 3.5E-08 71.9 12.3 132 447-607 47-207 (362)
443 1yaa_A Aspartate aminotransfer 97.3 0.0004 1.4E-08 77.4 9.1 237 469-760 104-409 (412)
444 2aeu_A Hypothetical protein MJ 97.1 0.0037 1.3E-07 69.2 13.3 124 448-607 63-223 (374)
445 4ao9_A Beta-phenylalanine amin 97.0 0.01 3.5E-07 68.1 16.8 160 578-762 277-446 (454)
446 4eu1_A Mitochondrial aspartate 97.0 0.0051 1.7E-07 68.4 14.0 241 468-759 109-408 (409)
447 2e7u_A Glutamate-1-semialdehyd 96.9 0.014 4.8E-07 65.3 15.9 154 582-758 259-423 (424)
448 1ohv_A 4-aminobutyrate aminotr 96.8 0.016 5.4E-07 66.4 16.1 61 177-237 240-304 (472)
449 2hox_A ALLIIN lyase 1; cystein 96.7 0.0064 2.2E-07 68.8 11.1 246 463-759 125-422 (427)
450 3bwn_A AT1G70560, L-tryptophan 96.6 0.023 7.7E-07 63.2 15.1 238 463-759 93-384 (391)
451 4atq_A 4-aminobutyrate transam 96.2 0.31 1E-05 55.8 21.4 156 582-760 288-453 (456)
452 4ao9_A Beta-phenylalanine amin 96.1 0.13 4.5E-06 58.8 18.0 56 178-236 206-265 (454)
453 4e3q_A Pyruvate transaminase; 96.0 0.84 2.9E-05 52.4 23.9 160 582-760 298-466 (473)
454 3k7y_A Aspartate aminotransfer 95.9 0.065 2.2E-06 60.3 14.1 90 145-238 125-220 (405)
455 2yky_A Beta-transaminase; tran 94.8 0.0014 4.9E-08 75.4 0.0 154 582-761 293-459 (465)
456 3tqx_A 2-amino-3-ketobutyrate 95.6 0.048 1.6E-06 59.7 11.2 260 448-760 93-394 (399)
457 2w8t_A SPT, serine palmitoyltr 95.5 0.099 3.4E-06 58.5 13.4 258 447-760 113-413 (427)
458 2zy4_A L-aspartate beta-decarb 95.4 0.017 5.6E-07 67.8 7.0 89 144-238 196-293 (546)
459 3bwn_A AT1G70560, L-tryptophan 95.3 0.14 4.6E-06 56.9 13.8 72 144-234 121-194 (391)
460 3aow_A Putative uncharacterize 94.1 0.23 7.8E-06 56.2 11.7 249 463-760 142-443 (448)
461 2zy4_A L-aspartate beta-decarb 93.9 1.5 5E-05 51.2 18.5 276 463-763 167-523 (546)
462 4atq_A 4-aminobutyrate transam 93.1 14 0.00047 42.1 24.2 75 165-239 188-274 (456)
463 2yky_A Beta-transaminase; tran 91.3 0.028 9.7E-07 64.6 0.0 55 178-235 219-277 (465)
464 4h51_A Aspartate aminotransfer 89.4 0.98 3.4E-05 51.0 9.5 91 145-238 140-236 (420)
465 2hox_A ALLIIN lyase 1; cystein 88.4 1.4 4.9E-05 49.3 10.0 59 143-213 156-214 (427)
466 4e3q_A Pyruvate transaminase; 88.0 8.6 0.00029 44.0 16.3 58 180-239 223-284 (473)
467 4a0g_A Adenosylmethionine-8-am 86.1 10 0.00035 46.5 16.5 81 673-759 742-825 (831)
468 3if2_A Aminotransferase; YP_26 82.7 0.49 1.7E-05 52.7 2.5 264 463-760 108-438 (444)
469 1t1v_A SH3BGRL3, SH3 domain-bi 51.0 36 0.0012 29.1 6.9 70 141-218 2-81 (93)
470 2ct6_A SH3 domain-binding glut 36.4 71 0.0024 28.5 6.7 69 142-218 9-93 (111)
471 3fkr_A L-2-keto-3-deoxyarabona 35.2 26 0.00088 37.7 4.0 55 170-224 19-73 (309)
472 3flu_A DHDPS, dihydrodipicolin 32.6 29 0.00099 37.0 3.9 55 170-224 18-72 (297)
473 3l21_A DHDPS, dihydrodipicolin 32.0 29 0.00099 37.2 3.8 55 170-224 26-80 (304)
474 3s5o_A 4-hydroxy-2-oxoglutarat 32.0 32 0.0011 36.9 4.1 55 170-224 25-79 (307)
475 3b4u_A Dihydrodipicolinate syn 31.7 31 0.0011 36.7 3.9 55 170-224 14-68 (294)
476 3cpr_A Dihydrodipicolinate syn 31.4 33 0.0011 36.7 4.1 55 170-224 27-81 (304)
477 1f6k_A N-acetylneuraminate lya 31.3 32 0.0011 36.5 4.0 55 170-224 14-69 (293)
478 4a0g_A Adenosylmethionine-8-am 31.3 36 0.0012 41.7 4.9 60 180-239 577-643 (831)
479 3na8_A Putative dihydrodipicol 31.1 27 0.00094 37.6 3.4 55 170-224 35-89 (315)
480 3tak_A DHDPS, dihydrodipicolin 30.7 29 0.001 36.8 3.5 55 170-224 12-66 (291)
481 3dz1_A Dihydrodipicolinate syn 30.7 32 0.0011 37.0 3.8 55 170-224 19-73 (313)
482 2wkj_A N-acetylneuraminate lya 30.1 34 0.0012 36.6 3.9 55 170-224 22-76 (303)
483 3si9_A DHDPS, dihydrodipicolin 29.9 29 0.00099 37.4 3.3 55 170-224 33-87 (315)
484 3h8q_A Thioredoxin reductase 3 29.8 1.2E+02 0.0041 26.9 7.1 73 141-218 17-91 (114)
485 2ojp_A DHDPS, dihydrodipicolin 29.7 30 0.001 36.7 3.4 55 170-224 12-66 (292)
486 3qze_A DHDPS, dihydrodipicolin 29.7 31 0.0011 37.2 3.5 55 170-224 34-88 (314)
487 2nuw_A 2-keto-3-deoxygluconate 29.5 28 0.00096 36.9 3.1 50 170-222 10-59 (288)
488 1xky_A Dihydrodipicolinate syn 29.5 35 0.0012 36.4 3.9 55 170-224 23-77 (301)
489 1w3i_A EDA, 2-keto-3-deoxy glu 29.1 33 0.0011 36.5 3.6 55 170-224 10-64 (293)
490 3k7y_A Aspartate aminotransfer 28.7 1.1E+02 0.0037 33.8 7.9 67 468-552 102-170 (405)
491 3g7q_A Valine-pyruvate aminotr 28.0 43 0.0015 36.2 4.4 153 582-760 241-411 (417)
492 2v9d_A YAGE; dihydrodipicolini 27.9 40 0.0014 36.8 4.1 55 170-224 42-96 (343)
493 3h5d_A DHDPS, dihydrodipicolin 27.6 33 0.0011 36.9 3.2 55 170-224 18-72 (311)
494 1fov_A Glutaredoxin 3, GRX3; a 27.1 1E+02 0.0035 24.8 5.7 66 142-215 2-69 (82)
495 2r8w_A AGR_C_1641P; APC7498, d 26.7 37 0.0013 36.8 3.5 55 170-224 45-99 (332)
496 4dpp_A DHDPS 2, dihydrodipicol 26.7 42 0.0014 37.0 3.9 55 170-224 70-124 (360)
497 1wik_A Thioredoxin-like protei 25.4 2.4E+02 0.0082 24.5 8.2 70 141-218 15-91 (109)
498 3eb2_A Putative dihydrodipicol 25.2 30 0.001 37.0 2.3 55 170-224 15-69 (300)
499 3qfe_A Putative dihydrodipicol 25.2 35 0.0012 36.8 2.9 55 170-224 21-76 (318)
500 3a5f_A Dihydrodipicolinate syn 24.5 48 0.0017 35.1 3.8 54 170-224 13-66 (291)
No 1
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=8.3e-52 Score=479.57 Aligned_cols=402 Identities=46% Similarity=0.887 Sum_probs=322.4
Q ss_pred hhhHhhccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCC-CC
Q psy852 4 LFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYP-PQ 82 (891)
Q Consensus 4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~-~~ 82 (891)
+.+.++|++++|+||+|++|++++.++|+++++++++.+|+|+..|..+|.+++||+++++|+++++|+|..+.... +.
T Consensus 60 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~ 139 (475)
T 3k40_A 60 IERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGK 139 (475)
T ss_dssp HHHHTGGGCCCTTCTTBCCSSCCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSS
T ss_pred HHHHHhccCCCCCCcCceeeCCCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCC
Confidence 55678999999999999999999999999999999999999999999999999999999999999999997642100 00
Q ss_pred CCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccc-----cCCccccccccCCeEEEecCCCChHHHH
Q psy852 83 GKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKK-----IHPFVDEGVLLSKLMAYCSKEAHSCVEK 157 (891)
Q Consensus 83 ~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~-----~~~~~~~g~~~~~~~v~~S~~~H~Sv~k 157 (891)
++| .+++|||.+ |+..+..+|.+.. ..|.+.++...++++|++|..+|+|+.+
T Consensus 140 ~~g---------------------v~t~ggt~a-nl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~ 197 (475)
T 3k40_A 140 GGG---------------------VIQGTASES-TLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVER 197 (475)
T ss_dssp CEE---------------------EEESCHHHH-HHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHH
T ss_pred CCe---------------------EEcCchHHH-HHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHH
Confidence 112 346788864 6666666776531 1333333334567899999999999999
Q ss_pred HHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCC
Q psy852 158 AAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 158 aa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
++.+.|.+++.||+|++| ||+++|+++|+++.++|..|++|++|+|||.+|++||+++|+++|++||+|+||||||||.
T Consensus 198 ~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~ 276 (475)
T 3k40_A 198 AGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGS 276 (475)
T ss_dssp HHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred HHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHH
Confidence 998888899999999999 9999999999999888888999999999999999999999999999997777777777654
Q ss_pred ccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccc
Q psy852 238 SFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCV 317 (891)
Q Consensus 238 ~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (891)
.+
T Consensus 277 ~~------------------------------------------------------------------------------ 278 (475)
T 3k40_A 277 AF------------------------------------------------------------------------------ 278 (475)
T ss_dssp GG------------------------------------------------------------------------------
T ss_pred HH------------------------------------------------------------------------------
Confidence 43
Q ss_pred ccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCc
Q psy852 318 ETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDP 397 (891)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~ 397 (891)
++++++..+.|++.+||+++|+|||+++|++||++++|++..+...+...+
T Consensus 279 -----------------------------~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~ 329 (475)
T 3k40_A 279 -----------------------------ICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDP 329 (475)
T ss_dssp -----------------------------GSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC--------
T ss_pred -----------------------------hCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCc
Confidence 334444556677789999999999999999999999998765543333333
Q ss_pred cccCCCCCCcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhHH
Q psy852 398 LYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECIF 477 (891)
Q Consensus 398 ~y~~~~~~~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean~ 477 (891)
.|+.....
T Consensus 330 ~yl~~~~~------------------------------------------------------------------------ 337 (475)
T 3k40_A 330 LYLKHDMQ------------------------------------------------------------------------ 337 (475)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCcC------------------------------------------------------------------------
Confidence 33311000
Q ss_pred HHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcC
Q psy852 478 VCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMG 557 (891)
Q Consensus 478 ~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g 557 (891)
T Consensus 338 -------------------------------------------------------------------------------- 337 (475)
T 3k40_A 338 -------------------------------------------------------------------------------- 337 (475)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccEEEEecCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccc
Q psy852 558 YIPFFVSTTLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIP 637 (891)
Q Consensus 558 ~ip~~VvataGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~ 637 (891)
+ ..+++.+++++
T Consensus 338 ------------------------------------------~--------------------------~~~~~~~~~~~ 349 (475)
T 3k40_A 338 ------------------------------------------G--------------------------SAPDYRHWQIP 349 (475)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ------------------------------------------C--------------------------CCCCccccccc
Confidence 0 00122356778
Q ss_pred ccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHH
Q psy852 638 LSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDI 717 (891)
Q Consensus 638 ~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L 717 (891)
++|+++++++|++|+.+|.+|+++++++..++++++.+.|+++++|+++.++.+++|+|++.+. +..+.++.++|
T Consensus 350 ~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~-----~~~~~~l~~~L 424 (475)
T 3k40_A 350 LGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGS-----NERNEALLKRI 424 (475)
T ss_dssp CCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSC-----HHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCc-----hHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999765 55788999999
Q ss_pred HhCCcEEEeeccccCCeEE-EEec-CCCCHHHHHHHHHHHHHHHH
Q psy852 718 NASGRLHMVPASQEQNDEV-FELQ-ERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 718 ~~~G~~~~s~s~~~g~~~l-~sv~-~~tT~edId~li~~L~ei~~ 760 (891)
+++|.++++++...+...+ +++. +++|++||+++++.|+++..
T Consensus 425 ~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 469 (475)
T 3k40_A 425 NGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAAD 469 (475)
T ss_dssp HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999988888888888888 9865 57899999999999998874
No 2
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-51 Score=477.63 Aligned_cols=403 Identities=45% Similarity=0.852 Sum_probs=333.0
Q ss_pred hhhHhhccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCC--CC
Q psy852 4 LFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMY--PP 81 (891)
Q Consensus 4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~--~~ 81 (891)
+.+.++|++++|+||||++|++++.++|++++++++..+|+|+..|..+|.+++||+++++|+++++|+|..+... ..
T Consensus 65 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~ 144 (481)
T 4e1o_A 65 IERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSS 144 (481)
T ss_dssp HHHHTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTC
T ss_pred HHHHHhcCCCCCCCCCeeEeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCC
Confidence 4566899999999999999999999999999999999999999999999999999999999999999999764210 00
Q ss_pred CCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccc-----cCCccccccccCCeEEEecCCCChHHH
Q psy852 82 QGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKK-----IHPFVDEGVLLSKLMAYCSKEAHSCVE 156 (891)
Q Consensus 82 ~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~-----~~~~~~~g~~~~~~~v~~S~~~H~Sv~ 156 (891)
.+.| .+++|||. +|+..+..+|++.. ..|.+.+....++++||+|+.+|+|+.
T Consensus 145 ~~~g---------------------~~~~ggt~-an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 202 (481)
T 4e1o_A 145 QGGG---------------------VLQSTVSE-STLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVE 202 (481)
T ss_dssp BCEE---------------------EEESCHHH-HHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHH
T ss_pred CCce---------------------EEeCchHH-HHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHH
Confidence 0112 24678875 56666666766521 134444334457889999999999999
Q ss_pred HHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccC
Q psy852 157 KAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 157 kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG 236 (891)
|++.+++.+++.||+|++|+||+++|+++|+++.++|..|++|++|+|||.+|++|||++|+++|++||+|+||||||||
T Consensus 203 ~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~ 282 (481)
T 4e1o_A 203 KAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAG 282 (481)
T ss_dssp HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGG
T ss_pred HHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHH
Confidence 99988889999999999999999999999999988899999999999999999999999999999999776666666655
Q ss_pred CccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccc
Q psy852 237 SSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC 316 (891)
Q Consensus 237 ~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (891)
..+
T Consensus 283 ~~~----------------------------------------------------------------------------- 285 (481)
T 4e1o_A 283 TAF----------------------------------------------------------------------------- 285 (481)
T ss_dssp GGG-----------------------------------------------------------------------------
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 443
Q ss_pred cccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccC
Q psy852 317 VETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD 396 (891)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~ 396 (891)
++++++..+.|++.+||+++|+|||+++|++||++++|++..+...+...
T Consensus 286 ------------------------------~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~ 335 (481)
T 4e1o_A 286 ------------------------------LCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVN 335 (481)
T ss_dssp ------------------------------GSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCC
T ss_pred ------------------------------hChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCC
Confidence 34444555667788999999999999999999999999876554444444
Q ss_pred ccccCCCCCCcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhH
Q psy852 397 PLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECI 476 (891)
Q Consensus 397 ~~y~~~~~~~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean 476 (891)
+.|+.....
T Consensus 336 ~~yl~~~~~----------------------------------------------------------------------- 344 (481)
T 4e1o_A 336 PIYLRHANS----------------------------------------------------------------------- 344 (481)
T ss_dssp CGGGCCTTT-----------------------------------------------------------------------
T ss_pred chhccCccc-----------------------------------------------------------------------
Confidence 444432100
Q ss_pred HHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhc
Q psy852 477 FVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETM 556 (891)
Q Consensus 477 ~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~ 556 (891)
T Consensus 345 -------------------------------------------------------------------------------- 344 (481)
T 4e1o_A 345 -------------------------------------------------------------------------------- 344 (481)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccEEEEecCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcc
Q psy852 557 GYIPFFVSTTLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGI 636 (891)
Q Consensus 557 g~ip~~VvataGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti 636 (891)
...+++.++++
T Consensus 345 ---------------------------------------------------------------------~~~~~~~~~~~ 355 (481)
T 4e1o_A 345 ---------------------------------------------------------------------GVATDFMHWQI 355 (481)
T ss_dssp ---------------------------------------------------------------------TTSCCGGGGSS
T ss_pred ---------------------------------------------------------------------CCCCCcccccc
Confidence 00112345677
Q ss_pred cccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHH
Q psy852 637 PLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLED 716 (891)
Q Consensus 637 ~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~ 716 (891)
+++|+++++++|++++.+|.+|+++++++..+++++|.+.|+++++|+++.++.+++|+|++.+. +..+.++.++
T Consensus 356 ~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~-----~~~~~~l~~~ 430 (481)
T 4e1o_A 356 PLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGP-----NSLTENVLKE 430 (481)
T ss_dssp SSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSC-----HHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCc-----hHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999989999999999765 5678899999
Q ss_pred HHhCCcEEEeeccccCCeEE-EEec-CCCCHHHHHHHHHHHHHHHH
Q psy852 717 INASGRLHMVPASQEQNDEV-FELQ-ERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 717 L~~~G~~~~s~s~~~g~~~l-~sv~-~~tT~edId~li~~L~ei~~ 760 (891)
|.++|.++++++...+...+ +++. ++||++||+++++.|+++..
T Consensus 431 L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 476 (481)
T 4e1o_A 431 IAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAAT 476 (481)
T ss_dssp HHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999888888888888888 9865 57899999999999998874
No 3
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=8.6e-46 Score=433.02 Aligned_cols=400 Identities=22% Similarity=0.345 Sum_probs=320.9
Q ss_pred hHhhccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q psy852 6 HFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKN 85 (891)
Q Consensus 6 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g 85 (891)
+.+++..++|+||+|++|++++.+.|++++++++..+|+|...|..+|.++++|.++++|+++++|++.+. .+|
T Consensus 84 ~~~~~~~~~~~~p~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~------~~~ 157 (511)
T 3vp6_A 84 RDTLKYGVRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD------GDG 157 (511)
T ss_dssp HHHHHTSCCTTSTTEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS------CEE
T ss_pred HHHhhccCCCCCCCceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCC------Cce
Confidence 34455667889999999999999999999999999999999999999999999999999999999998542 122
Q ss_pred CCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccc-ccc-ccCCeEEEecCCCChHHHHHHHHcC
Q psy852 86 ATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVD-EGV-LLSKLMAYCSKEAHSCVEKAAMMAF 163 (891)
Q Consensus 86 ~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~-~g~-~~~~~~v~~S~~~H~Sv~kaa~~~~ 163 (891)
+ +++|||.+ |...+..+|.+. .|.++ +|. ..++.+|++|..+|+|+.+++.+.+
T Consensus 158 ~---------------------~t~ggt~a-~~~al~~a~~~~--~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g 213 (511)
T 3vp6_A 158 I---------------------FSPGGAIS-NMYSIMAARYKY--FPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALG 213 (511)
T ss_dssp E---------------------EESSHHHH-HHHHHHHHHHHH--CTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred E---------------------ECCchHHH-HHHHHHHHHHHh--hhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcC
Confidence 2 45788764 555555566542 12222 222 1357789999999999999998766
Q ss_pred C---eEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccc
Q psy852 164 V---RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFI 240 (891)
Q Consensus 164 ~---~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~ 240 (891)
. +++.|++|++|+||+++|+++|+++.++|..|.+|+++.|+|.+|++|||++|+++|++||+|+|||+||||..
T Consensus 214 ~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~-- 291 (511)
T 3vp6_A 214 FGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGL-- 291 (511)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGG--
T ss_pred CCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhH--
Confidence 5 89999999999999999999999998889999999999999999999999999999999976666666665544
Q ss_pred cCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccc
Q psy852 241 CPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETR 320 (891)
Q Consensus 241 ~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (891)
T Consensus 292 -------------------------------------------------------------------------------- 291 (511)
T 3vp6_A 292 -------------------------------------------------------------------------------- 291 (511)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCcccc
Q psy852 321 GHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYL 400 (891)
Q Consensus 321 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~ 400 (891)
+++++++..+.|++.+||+++|+|||+++|++||++++|++..+...+...+.|+
T Consensus 292 -------------------------~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl 346 (511)
T 3vp6_A 292 -------------------------LMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYL 346 (511)
T ss_dssp -------------------------GGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTT
T ss_pred -------------------------hhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccc
Confidence 3445555666777789999999999999999999999998765554444555555
Q ss_pred CCCCCCcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhHHHHH
Q psy852 401 QHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCM 480 (891)
Q Consensus 401 ~~~~~~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al 480 (891)
......
T Consensus 347 ~~~~~~-------------------------------------------------------------------------- 352 (511)
T 3vp6_A 347 FQQDKH-------------------------------------------------------------------------- 352 (511)
T ss_dssp CCSSCS--------------------------------------------------------------------------
T ss_pred cCcccc--------------------------------------------------------------------------
Confidence 332000
Q ss_pred HHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCcc
Q psy852 481 LAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIP 560 (891)
Q Consensus 481 ~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip 560 (891)
T Consensus 353 -------------------------------------------------------------------------------- 352 (511)
T 3vp6_A 353 -------------------------------------------------------------------------------- 352 (511)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccc
Q psy852 561 FFVSTTLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSR 640 (891)
Q Consensus 561 ~~VvataGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SR 640 (891)
+ ...++..+++++++|
T Consensus 353 ------------------------------------~----------------------------~~~~~~~~~~~~~~r 368 (511)
T 3vp6_A 353 ------------------------------------Y----------------------------DVSYDTGDKAIQCGR 368 (511)
T ss_dssp ------------------------------------S----------------------------CGGGCCGGGSSCSSC
T ss_pred ------------------------------------c----------------------------ccccCccCCCCCCCC
Confidence 0 001123456778899
Q ss_pred cccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeC--CCceeEEEEEecCCcc----------hhhhh
Q psy852 641 RFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN--DVRLGLVCFRLRSENN----------LIADQ 708 (891)
Q Consensus 641 r~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~--~~~~~iV~Fr~~~~~~----------~~~d~ 708 (891)
+++++++|++|+.+|.+|+++++++..+++++|.+.|++.|+|+++. +|..++|+|++.|... ..++.
T Consensus 369 ~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~ 448 (511)
T 3vp6_A 369 HVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHK 448 (511)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 6889999999976532 13445
Q ss_pred hHHHHHHHHHhCCcEEEeeccccCC-eEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 709 NNRKLLEDINASGRLHMVPASQEQN-DEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 709 ln~~L~~~L~~~G~~~~s~s~~~g~-~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
.+.++.++|.++|++++......++ ..+ +++ ++.+|.+||++++++|+++.+
T Consensus 449 ~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~ 503 (511)
T 3vp6_A 449 VAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQ 503 (511)
T ss_dssp HHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 6778999999999877765444443 356 887 779999999999999998873
No 4
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=1.8e-45 Score=426.10 Aligned_cols=405 Identities=49% Similarity=0.906 Sum_probs=316.8
Q ss_pred hhhHhhccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCC-CC
Q psy852 4 LFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYP-PQ 82 (891)
Q Consensus 4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~-~~ 82 (891)
+.+.+.|+.++|+||+|++|++++.+.|+.++++++..+|+|...|..+|.++++|.++++|+++++|++..+.... +.
T Consensus 60 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~ 139 (486)
T 1js3_A 60 VEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGE 139 (486)
T ss_dssp HHHTTGGGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCS
T ss_pred HHHHHhcCCCCCCCCCceEeCCCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCC
Confidence 44557899999999999999999999999999999999999999999999999999999999999999986532100 00
Q ss_pred CCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc-----CCccccccccCCeEEEecCCCChHHHH
Q psy852 83 GKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI-----HPFVDEGVLLSKLMAYCSKEAHSCVEK 157 (891)
Q Consensus 83 ~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~-----~~~~~~g~~~~~~~v~~S~~~H~Sv~k 157 (891)
+. +.+|+|||++ |...+..+|..... .+.+.+....++.+|++|..+|+|+.+
T Consensus 140 ~~---------------------~v~t~ggTeA-~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~ 197 (486)
T 1js3_A 140 GG---------------------GVIQGSASEA-TLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVER 197 (486)
T ss_dssp CE---------------------EEEESCHHHH-HHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHH
T ss_pred CC---------------------eEEcCCcHHH-HHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHH
Confidence 11 2246788854 44444445543100 000011111235679999999999999
Q ss_pred HHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCC
Q psy852 158 AAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 158 aa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
++.+.|.+++.||+|++|+||+++|+++|++++++|..|++|++|.|||.+|++||+++|+++|+++|+|+|||+||||+
T Consensus 198 ~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~ 277 (486)
T 1js3_A 198 AGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGS 277 (486)
T ss_dssp HHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred HHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHH
Confidence 99887889999999999999999999999999888999999999999999999999999999999998777777777665
Q ss_pred ccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccc
Q psy852 238 SFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCV 317 (891)
Q Consensus 238 ~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (891)
.+.+
T Consensus 278 ~~~~---------------------------------------------------------------------------- 281 (486)
T 1js3_A 278 AFIC---------------------------------------------------------------------------- 281 (486)
T ss_dssp GGGS----------------------------------------------------------------------------
T ss_pred HHHC----------------------------------------------------------------------------
Confidence 5433
Q ss_pred ccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCc
Q psy852 318 ETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDP 397 (891)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~ 397 (891)
++++..+.|++.+|++++|+|||+++|++||++++|++..+...+...+
T Consensus 282 -------------------------------~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~ 330 (486)
T 1js3_A 282 -------------------------------PEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDP 330 (486)
T ss_dssp -------------------------------TTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC---
T ss_pred -------------------------------HHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCc
Confidence 3333444566678999999999999999999999998754333332223
Q ss_pred cccCCCCCCcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhHH
Q psy852 398 LYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECIF 477 (891)
Q Consensus 398 ~y~~~~~~~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean~ 477 (891)
.|+.....
T Consensus 331 ~yl~~~~~------------------------------------------------------------------------ 338 (486)
T 1js3_A 331 VYLKHSHQ------------------------------------------------------------------------ 338 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhCCCcc------------------------------------------------------------------------
Confidence 33321100
Q ss_pred HHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcC
Q psy852 478 VCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMG 557 (891)
Q Consensus 478 ~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g 557 (891)
.
T Consensus 339 --------------------------------------------------------------------------~----- 339 (486)
T 1js3_A 339 --------------------------------------------------------------------------G----- 339 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------c-----
Confidence 0
Q ss_pred CccEEEEecCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccc
Q psy852 558 YIPFFVSTTLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIP 637 (891)
Q Consensus 558 ~ip~~VvataGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~ 637 (891)
. ...+++.+++++
T Consensus 340 -------------------------------------------------~------------------~~~~~~~~~~~~ 352 (486)
T 1js3_A 340 -------------------------------------------------S------------------GLITDYRHWQLP 352 (486)
T ss_dssp -------------------------------------------------C------------------CSCCCGGGSSSC
T ss_pred -------------------------------------------------c------------------cCCCCccccCCC
Confidence 0 001122345677
Q ss_pred ccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHH
Q psy852 638 LSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDI 717 (891)
Q Consensus 638 ~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L 717 (891)
++|+++++++|++++.+|.+|+++++++..++++++.+.|+++++++++.++..++++|++.+. +..++++.++|
T Consensus 353 ~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~-----~~~~~~l~~~L 427 (486)
T 1js3_A 353 LGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGS-----DGLNEALLERI 427 (486)
T ss_dssp SCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSC-----HHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecCh-----HHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999888899999999754 45678899999
Q ss_pred HhCCcEEEeeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 718 NASGRLHMVPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 718 ~~~G~~~~s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
.++|+++++++...+..++ +++ ++++|++||+++++.|++++.
T Consensus 428 ~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 472 (486)
T 1js3_A 428 NSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAA 472 (486)
T ss_dssp HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 9999887777777777778 986 668999999999999998874
No 5
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-43 Score=412.12 Aligned_cols=397 Identities=23% Similarity=0.331 Sum_probs=309.9
Q ss_pred hhhHhhccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Q psy852 4 LFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQG 83 (891)
Q Consensus 4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~ 83 (891)
+.+.++|++++|+||+|++|++++...++++++++...+|+|...|..+|.++++|..+++|+++++|+++..
T Consensus 87 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~------- 159 (497)
T 2qma_A 87 VAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKA------- 159 (497)
T ss_dssp HHHHTTTTSCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC-------
T ss_pred HHHHHhcCCCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCC-------
Confidence 4567899999999999999999999999999999999999999999999999999999999999999997521
Q ss_pred CCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc---CCccc-cccc--cCCeEEEecCCCChHHHH
Q psy852 84 KNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI---HPFVD-EGVL--LSKLMAYCSKEAHSCVEK 157 (891)
Q Consensus 84 ~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~---~~~~~-~g~~--~~~~~v~~S~~~H~Sv~k 157 (891)
+++ +++|||.+ |...+..+|.+... .+..+ .|.. .++..|++|..+|+|+.+
T Consensus 160 ~~~---------------------~t~ggt~a-~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~ 217 (497)
T 2qma_A 160 DGI---------------------FTSGGTQS-NQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQK 217 (497)
T ss_dssp EEE---------------------EESSHHHH-HHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHH
T ss_pred CeE---------------------EcCCchHH-HHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHH
Confidence 122 45788764 44445556543110 01111 1211 135689999999999999
Q ss_pred HHHHcCC---eEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccc
Q psy852 158 AAMMAFV---RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 158 aa~~~~~---~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~ 234 (891)
++.+.+. +++.||+|++|+||+++|+++|+++.++|.+|++|++|.|||.+|++||+++|+++|++||+|+|||+||
T Consensus 218 ~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~ 297 (497)
T 2qma_A 218 SASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAY 297 (497)
T ss_dssp HHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred HHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhh
Confidence 9976543 8999999999999999999999988777777889999999999999999999999999998888888888
Q ss_pred cCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccc
Q psy852 235 AGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAH 314 (891)
Q Consensus 235 GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (891)
||+...
T Consensus 298 ~~~~~~-------------------------------------------------------------------------- 303 (497)
T 2qma_A 298 GGALIL-------------------------------------------------------------------------- 303 (497)
T ss_dssp GGGGGG--------------------------------------------------------------------------
T ss_pred hHHHHh--------------------------------------------------------------------------
Confidence 664432
Q ss_pred cccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcc
Q psy852 315 SCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV 394 (891)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~ 394 (891)
++ ++..+++++.+|++++|+|||+++|++||++++|++..+. .+.
T Consensus 304 ---------------------------------~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~-~~~ 348 (497)
T 2qma_A 304 ---------------------------------SS-HKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNFK-FLL 348 (497)
T ss_dssp ---------------------------------ST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGGG-GGC
T ss_pred ---------------------------------Cc-chHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHHH-Hhc
Confidence 22 2334566777899999999999999999999999875332 121
Q ss_pred cCccccCCCCCCcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcch
Q psy852 395 VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASE 474 (891)
Q Consensus 395 ~~~~y~~~~~~~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggse 474 (891)
..+.|+.... +
T Consensus 349 ~~~~yl~~~~--------------------------------------------------------------------~- 359 (497)
T 2qma_A 349 HHADYLNREH--------------------------------------------------------------------D- 359 (497)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred CCchhcCCcc--------------------------------------------------------------------c-
Confidence 1111211000 0
Q ss_pred hHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhh
Q psy852 475 CIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDE 554 (891)
Q Consensus 475 an~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~ 554 (891)
T Consensus 360 -------------------------------------------------------------------------------- 359 (497)
T 2qma_A 360 -------------------------------------------------------------------------------- 359 (497)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCccEEEEecCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCC
Q psy852 555 TMGYIPFFVSTTLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHW 634 (891)
Q Consensus 555 ~~g~ip~~VvataGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ 634 (891)
..+++.++
T Consensus 360 ------------------------------------------------------------------------~~~~~~~~ 367 (497)
T 2qma_A 360 ------------------------------------------------------------------------ELPNLVDK 367 (497)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------------------cCCCcccc
Confidence 00012234
Q ss_pred cccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHH
Q psy852 635 GIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLL 714 (891)
Q Consensus 635 ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~ 714 (891)
+++++|+++++++|++++.+|.+|+++++++..+++++|.+.|+++++++++.++..++|+|++.+.. ...+.+++.+.
T Consensus 368 ~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~l~~~l~ 446 (497)
T 2qma_A 368 SIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHET-ADLDELNKALR 446 (497)
T ss_dssp --CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSS-SCHHHHHHHHH
T ss_pred CCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCc-cCHHHHHHHHH
Confidence 56679999999999999999999999999999999999999999999999988889999999997642 12345678889
Q ss_pred HHHHhCCcEEEeeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 715 EDINASGRLHMVPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 715 ~~L~~~G~~~~s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
+.|.++|+++..++...+..++ +++ ++.+|++||+++++.|+++..
T Consensus 447 ~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~ 494 (497)
T 2qma_A 447 LEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAV 494 (497)
T ss_dssp HHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999987776666777778 997 889999999999999998763
No 6
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=4.3e-43 Score=408.36 Aligned_cols=399 Identities=22% Similarity=0.345 Sum_probs=312.1
Q ss_pred hHhhccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q psy852 6 HFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKN 85 (891)
Q Consensus 6 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g 85 (891)
+.+++...+++||+|++|++++..++++++++++..+|+|...|..+|.++++|.++++|+++++|++.+. .++
T Consensus 81 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~------~~~ 154 (504)
T 2okj_A 81 RDTLKYGVRTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD------GDG 154 (504)
T ss_dssp HHHHHTSCCTTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS------CEE
T ss_pred HHHhhccCCCCCCCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCC------CCE
Confidence 44556666666999999999999999999999999999999999999999999999999999999998421 112
Q ss_pred CCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccc-cccc-cCCeEEEecCCCChHHHHHHHHcC
Q psy852 86 ATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVD-EGVL-LSKLMAYCSKEAHSCVEKAAMMAF 163 (891)
Q Consensus 86 ~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~-~g~~-~~~~~v~~S~~~H~Sv~kaa~~~~ 163 (891)
.+++|||. ++...+..+|.+. .|.++ .|.. .++++|++|..+|+|+.+++.+.+
T Consensus 155 ---------------------~~t~ggte-a~~~al~~~~~~~--~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g 210 (504)
T 2okj_A 155 ---------------------IFSPGGAI-SNMYSIMAARYKY--FPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALG 210 (504)
T ss_dssp ---------------------EEESSHHH-HHHHHHHHHHHHH--CTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred ---------------------EEeCCcHH-HHHHHHHHHHHHH--hhHHhhcCccccCCeEEEECCcchHHHHHHHHHcC
Confidence 24578875 4555555566532 12111 1211 235689999999999999997654
Q ss_pred C---eEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccc
Q psy852 164 V---RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFI 240 (891)
Q Consensus 164 ~---~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~ 240 (891)
. +++.||+|++|+||+++|+++|+++.++|..|.+|++|.|||.+|++||+++|+++|+++|+|+|||+||||+.+.
T Consensus 211 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~ 290 (504)
T 2okj_A 211 FGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLM 290 (504)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred CCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHh
Confidence 4 8999999999999999999999988888888999999999999999999999999999998777777777665443
Q ss_pred cCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccc
Q psy852 241 CPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETR 320 (891)
Q Consensus 241 ~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (891)
T Consensus 291 -------------------------------------------------------------------------------- 290 (504)
T 2okj_A 291 -------------------------------------------------------------------------------- 290 (504)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCcccc
Q psy852 321 GHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYL 400 (891)
Q Consensus 321 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~ 400 (891)
+++++..++|++.+|++++|+|||+++|++||++++|++..+...+...++|+
T Consensus 291 ---------------------------~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l 343 (504)
T 2okj_A 291 ---------------------------SRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYL 343 (504)
T ss_dssp ---------------------------CTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSS
T ss_pred ---------------------------CHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccc
Confidence 33344445666679999999999999999999999998644433333344444
Q ss_pred CCCCCCcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhHHHHH
Q psy852 401 QHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCM 480 (891)
Q Consensus 401 ~~~~~~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al 480 (891)
.+....
T Consensus 344 ~~~~~~-------------------------------------------------------------------------- 349 (504)
T 2okj_A 344 FQPDKQ-------------------------------------------------------------------------- 349 (504)
T ss_dssp CCSCCS--------------------------------------------------------------------------
T ss_pred cCCccc--------------------------------------------------------------------------
Confidence 221000
Q ss_pred HHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCcc
Q psy852 481 LAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIP 560 (891)
Q Consensus 481 ~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip 560 (891)
T Consensus 350 -------------------------------------------------------------------------------- 349 (504)
T 2okj_A 350 -------------------------------------------------------------------------------- 349 (504)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccc
Q psy852 561 FFVSTTLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSR 640 (891)
Q Consensus 561 ~~VvataGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SR 640 (891)
+ ...+++.+++++++|
T Consensus 350 ------------------------------------~----------------------------~~~~~~~~~~~~~~r 365 (504)
T 2okj_A 350 ------------------------------------Y----------------------------DVSYDTGDKAIQCGR 365 (504)
T ss_dssp ------------------------------------S----------------------------CGGGCCGGGSSCSSC
T ss_pred ------------------------------------c----------------------------cCcCCcccCCCCCCC
Confidence 0 001123346678899
Q ss_pred cccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeC--CCceeEEEEEecCCc----------chhhhh
Q psy852 641 RFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN--DVRLGLVCFRLRSEN----------NLIADQ 708 (891)
Q Consensus 641 r~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~--~~~~~iV~Fr~~~~~----------~~~~d~ 708 (891)
|++++++|++++.+|.+|+++++++..+++++|.+.|+++++++++. +|..++|+|++.+.. .+..+.
T Consensus 366 r~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 445 (504)
T 2okj_A 366 HVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHK 445 (504)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTT
T ss_pred CccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHH
Confidence 99999999999999999999999999999999999999999999987 578899999986531 112344
Q ss_pred hHHHHHHHHHhCCcEEEeeccccCC-eEE-EEec-CCCCHHHHHHHHHHHHHHH
Q psy852 709 NNRKLLEDINASGRLHMVPASQEQN-DEV-FELQ-ERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 709 ln~~L~~~L~~~G~~~~s~s~~~g~-~~l-~sv~-~~tT~edId~li~~L~ei~ 759 (891)
.+..+.++|.++|++++.++...+. .++ +++. +.+|++||+++++.|++++
T Consensus 446 ~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~ 499 (504)
T 2okj_A 446 VAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLG 499 (504)
T ss_dssp HHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 5778999999999877776655554 467 9985 7999999999999999876
No 7
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=8.8e-42 Score=398.80 Aligned_cols=398 Identities=23% Similarity=0.353 Sum_probs=307.5
Q ss_pred hhHhhccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q psy852 5 FHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGK 84 (891)
Q Consensus 5 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~ 84 (891)
++.+++..++++||+|++|++++..++++++++++...|+|...|..+|.++++|.++.+|+++++|++.. .
T Consensus 96 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~--------~ 167 (515)
T 2jis_A 96 CRAVIRYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSG--------D 167 (515)
T ss_dssp HHHHHHHSCCTTSTTEESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSC--------E
T ss_pred HHHHhcCCCCCCCCCeEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCC--------C
Confidence 34455666666799999999999999999999999999999999999999999999999999999999832 1
Q ss_pred CCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccc-ccc-ccCCeEEEecCCCChHHHHHHHHc
Q psy852 85 NATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVD-EGV-LLSKLMAYCSKEAHSCVEKAAMMA 162 (891)
Q Consensus 85 g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~-~g~-~~~~~~v~~S~~~H~Sv~kaa~~~ 162 (891)
+ .+++|||.+ |...+..+|.+. .|.++ .|. ..++++|++|..+|+|+.+++.+.
T Consensus 168 ~---------------------~~t~ggtea-~~~al~~ar~~~--~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~ 223 (515)
T 2jis_A 168 G---------------------IFCPGGSIS-NMYAVNLARYQR--YPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFL 223 (515)
T ss_dssp E---------------------EEESSHHHH-HHHHHHHHHHHH--CTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHT
T ss_pred e---------------------EEcCCcHHH-HHHHHHHHHHHH--hhHHhhcCccccCCeEEEECCCccHHHHHHHHHc
Confidence 2 245788754 555666666532 11111 121 124668999999999999999765
Q ss_pred CC---eEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCcc
Q psy852 163 FV---RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSF 239 (891)
Q Consensus 163 ~~---~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~ 239 (891)
+. +++.||+|++|+||+++|+++|+++.++|..|.+|+++.|||.+|++||+++|+++|+++|+|+|||+||||+.+
T Consensus 224 g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~ 303 (515)
T 2jis_A 224 GLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVL 303 (515)
T ss_dssp TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGG
T ss_pred CCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHH
Confidence 55 899999999999999999999998887888899999999999999999999999999999877777777765544
Q ss_pred ccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccc
Q psy852 240 ICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVET 319 (891)
Q Consensus 240 ~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (891)
.
T Consensus 304 ~------------------------------------------------------------------------------- 304 (515)
T 2jis_A 304 L------------------------------------------------------------------------------- 304 (515)
T ss_dssp G-------------------------------------------------------------------------------
T ss_pred h-------------------------------------------------------------------------------
Confidence 3
Q ss_pred ccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEecc-ccchhhcccCcc
Q psy852 320 RGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADR-YKLTSALVVDPL 398 (891)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~-~~~~~~~~~~~~ 398 (891)
+++++..+++++.+|++++|+|||+++|++||++++|++ ..+...+...++
T Consensus 305 ----------------------------~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~ 356 (515)
T 2jis_A 305 ----------------------------SQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQAS 356 (515)
T ss_dssp ----------------------------CTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---
T ss_pred ----------------------------ChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCch
Confidence 333344456677799999999999999999999999986 333322222333
Q ss_pred ccCCCCCCcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhHHH
Q psy852 399 YLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECIFV 478 (891)
Q Consensus 399 y~~~~~~~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean~~ 478 (891)
|+.+....
T Consensus 357 yl~~~~~~------------------------------------------------------------------------ 364 (515)
T 2jis_A 357 YLFQQDKF------------------------------------------------------------------------ 364 (515)
T ss_dssp ------CC------------------------------------------------------------------------
T ss_pred hccCCccc------------------------------------------------------------------------
Confidence 33211000
Q ss_pred HHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCC
Q psy852 479 CMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGY 558 (891)
Q Consensus 479 al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ 558 (891)
T Consensus 365 -------------------------------------------------------------------------------- 364 (515)
T 2jis_A 365 -------------------------------------------------------------------------------- 364 (515)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEEecCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccc
Q psy852 559 IPFFVSTTLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPL 638 (891)
Q Consensus 559 ip~~VvataGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~ 638 (891)
. ...++.+++++++
T Consensus 365 --------------------------------------~----------------------------~~~~~~~~~~~~~ 378 (515)
T 2jis_A 365 --------------------------------------Y----------------------------DVALDTGDKVVQC 378 (515)
T ss_dssp --------------------------------------S----------------------------CGGGCCGGGCSCS
T ss_pred --------------------------------------c----------------------------cccCCCCCCCCCC
Confidence 0 0001223456678
Q ss_pred cccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCc------c----hhhhh
Q psy852 639 SRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSEN------N----LIADQ 708 (891)
Q Consensus 639 SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~------~----~~~d~ 708 (891)
+|+++++++|++++.+|.+|+++++++..+++++|.+.|+++++++++.++..++|+|++.+.. . ..++.
T Consensus 379 ~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~ 458 (515)
T 2jis_A 379 GRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSK 458 (515)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHT
T ss_pred CCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888899999986431 1 12233
Q ss_pred hHHHHHHHHHhCCcEEEeeccccC-CeEE-EEe-cCCCCHHHHHHHHHHHHHHH
Q psy852 709 NNRKLLEDINASGRLHMVPASQEQ-NDEV-FEL-QERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 709 ln~~L~~~L~~~G~~~~s~s~~~g-~~~l-~sv-~~~tT~edId~li~~L~ei~ 759 (891)
.+..+.+.|.++|.++++.+...+ ..++ +++ ++++|++|||++++.|++++
T Consensus 459 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~ 512 (515)
T 2jis_A 459 VAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLG 512 (515)
T ss_dssp HHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 455688889999988766554444 3467 998 78999999999999998876
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=3.7e-33 Score=319.97 Aligned_cols=382 Identities=14% Similarity=0.120 Sum_probs=277.9
Q ss_pred hhHh-hccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Q psy852 5 FHFL-SHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQG 83 (891)
Q Consensus 5 ~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~ 83 (891)
.+.+ .++.++|.||+|++. ... ..+.+++...+|.|...|..+|.+.++|.++.+|+++++|++..... ..
T Consensus 33 ~~~~~~~~~~~~~~~~f~~~---~~~--~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~---~~ 104 (452)
T 2dgk_A 33 NDELYLDGNARQNLATFCQT---WDD--ENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNG---QA 104 (452)
T ss_dssp HHHGGGSCCCTTBCSCCSCC---CCC--HHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTS---CC
T ss_pred HHHhcCCCCCccCCCCeeCC---Cch--HHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCccccc---CC
Confidence 3444 588899999999871 111 35789999999998888999999999999999999999999865200 00
Q ss_pred CCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcC
Q psy852 84 KNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 163 (891)
Q Consensus 84 ~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~ 163 (891)
.+ .+++|||... ...+..++.+.... ....|....+..|++|. +|+|+.+++.+.|
T Consensus 105 ~~---------------------~~t~ggtea~-~~al~a~~~~~~~~-~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G 160 (452)
T 2dgk_A 105 VG---------------------TNTIGSSEAC-MLGGMAMKWRWRKR-MEAAGKPTDKPNLVCGP-VQICWHKFARYWD 160 (452)
T ss_dssp EE---------------------EEESSHHHHH-HHHHHHHHHHHHHH-HHHTTCCCSCCEEEESS-CCHHHHHHHHHTT
T ss_pred ce---------------------EEeCCHHHHH-HHHHHHHHHHHHHH-HHhcCCCCCCcEEEECC-CcHHHHHHHHHcC
Confidence 11 2457887654 33333333321000 00011101234588888 9999999998888
Q ss_pred CeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc------CCceeeeccccC
Q psy852 164 VRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF------DVWLHVDGAYAG 236 (891)
Q Consensus 164 ~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~------~~~lHvDaA~GG 236 (891)
.+++.||+|+ +|+||+++|+++|+++ |.+|+++.+||.+|.+||+++|+++|+++ ++|+|||+||||
T Consensus 161 ~~v~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~ 234 (452)
T 2dgk_A 161 VELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGG 234 (452)
T ss_dssp CEEEECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGG
T ss_pred ceEEEEecCCCCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHH
Confidence 8999999987 7999999999999764 57999999999999999999999999996 888888888876
Q ss_pred CccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccc
Q psy852 237 SSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC 316 (891)
Q Consensus 237 ~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (891)
+..- |
T Consensus 235 ~~~~------------------------------------------------------~--------------------- 239 (452)
T 2dgk_A 235 FLAP------------------------------------------------------F--------------------- 239 (452)
T ss_dssp GTHH------------------------------------------------------H---------------------
T ss_pred HHHH------------------------------------------------------h---------------------
Confidence 5420 0
Q ss_pred cccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccC
Q psy852 317 VETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD 396 (891)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~ 396 (891)
+++.....+ .+..+|++++|+|||+++|+++|++++|++..+...+...
T Consensus 240 ------------------------------~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~ 288 (452)
T 2dgk_A 240 ------------------------------VAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFN 288 (452)
T ss_dssp ------------------------------HCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEE
T ss_pred ------------------------------hCccchhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccC
Confidence 011110111 1346899999999999999999999998764332111111
Q ss_pred ccccCCCCCCcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhH
Q psy852 397 PLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECI 476 (891)
Q Consensus 397 ~~y~~~~~~~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean 476 (891)
+.|+..
T Consensus 289 ~~~~~~-------------------------------------------------------------------------- 294 (452)
T 2dgk_A 289 VDYLGG-------------------------------------------------------------------------- 294 (452)
T ss_dssp ECCTTC--------------------------------------------------------------------------
T ss_pred ccccCC--------------------------------------------------------------------------
Confidence 111100
Q ss_pred HHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhc
Q psy852 477 FVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETM 556 (891)
Q Consensus 477 ~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~ 556 (891)
T Consensus 295 -------------------------------------------------------------------------------- 294 (452)
T 2dgk_A 295 -------------------------------------------------------------------------------- 294 (452)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccEEEEecCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcc
Q psy852 557 GYIPFFVSTTLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGI 636 (891)
Q Consensus 557 g~ip~~VvataGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti 636 (891)
....+++
T Consensus 295 -------------------------------------------------------------------------~~~~~~~ 301 (452)
T 2dgk_A 295 -------------------------------------------------------------------------QIGTFAI 301 (452)
T ss_dssp -------------------------------------------------------------------------CEEECCS
T ss_pred -------------------------------------------------------------------------CCCCccc
Confidence 0001234
Q ss_pred cccccc-cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCC----CceeEEEEEecCCcchhhhhh-H
Q psy852 637 PLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND----VRLGLVCFRLRSENNLIADQN-N 710 (891)
Q Consensus 637 ~~SRr~-~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~----~~~~iV~Fr~~~~~~~~~d~l-n 710 (891)
+++|++ .++++|++++.+|.+|+++++++..+++++|.+.|+++++++++.+ +..++|+|++.+... +.. .
T Consensus 302 ~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~---~~~~~ 378 (452)
T 2dgk_A 302 NFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED---PGYTL 378 (452)
T ss_dssp CCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCC---CSCCH
T ss_pred CCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCccc---ccCCH
Confidence 457765 7889999999999999999999999999999999999999999865 578999999975310 112 3
Q ss_pred HHHHHHHHhCCcE---EEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 711 RKLLEDINASGRL---HMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 711 ~~L~~~L~~~G~~---~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.++.++|.++|+. +..+....+..++ ++++.++|++|+|+++++|+++..
T Consensus 379 ~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 379 YDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp HHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 6889999999984 4444455566778 999999999999999999998874
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=1.1e-31 Score=313.03 Aligned_cols=377 Identities=16% Similarity=0.178 Sum_probs=276.8
Q ss_pred CCCCccc-cccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCc
Q psy852 14 HWQHPRF-HAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDI 92 (891)
Q Consensus 14 ~~~~p~~-~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~ 92 (891)
...||++ ++.+.+.... ..+.+++...+|.|...|..+|.++++|.++.+|+++++|++..... ...
T Consensus 52 l~gnp~~~l~s~~t~~~~-~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~---~~~-------- 119 (502)
T 3hbx_A 52 LDGNPRLNLASFVTTWME-PECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAE---TAV-------- 119 (502)
T ss_dssp GSCCGGGBTTCCSCCCCC-HHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSC---CCE--------
T ss_pred cCCCCCceeccccCCCCC-HHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCccccc---CCc--------
Confidence 3468884 4444333333 34778888889999888999999999999999999999999832100 000
Q ss_pred cccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecC
Q psy852 93 DMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD 172 (891)
Q Consensus 93 ~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d 172 (891)
|.+++||+..+++.+..+.+...... ..+|....++.|++|..+|+|+.+++.+.|.+++.|+++
T Consensus 120 -------------g~~t~ggtea~~~a~~a~~~~~~~~~--~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~ 184 (502)
T 3hbx_A 120 -------------GVGTVGSSEAIMLAGLAFKRKWQNKR--KAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLS 184 (502)
T ss_dssp -------------EEEESSHHHHHHHHHHHHHHHHHHHH--HHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCB
T ss_pred -------------ceecCcHHHHHHHHHHHHHHHHhHHH--HhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecC
Confidence 23467888665544333322211000 011222234579999999999999998888899999998
Q ss_pred CC-CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc------CCceeeeccccCCccccCCCC
Q psy852 173 DK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF------DVWLHVDGAYAGSSFICPEFR 245 (891)
Q Consensus 173 ~~-g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~------~~~lHvDaA~GG~~~~~~~~~ 245 (891)
++ |+||+++|+++|+++ |.+|+++.+||.+|.++|+++|+++|+++ |+|+|||+||||+..-
T Consensus 185 ~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p----- 253 (502)
T 3hbx_A 185 EGYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAP----- 253 (502)
T ss_dssp TTBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHH-----
T ss_pred CCcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhh-----
Confidence 76 999999999998765 57999999999999999999999999999 8999999999775420
Q ss_pred ccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccccc
Q psy852 246 PFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQS 325 (891)
Q Consensus 246 ~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (891)
T Consensus 254 -------------------------------------------------------------------------------- 253 (502)
T 3hbx_A 254 -------------------------------------------------------------------------------- 253 (502)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCC
Q psy852 326 YRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHE 405 (891)
Q Consensus 326 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~ 405 (891)
++++.....+ .+..+|++++++|||+++|+++|+++++++..+...+...+.|+...
T Consensus 254 --------------------~~~~~~~~~~-~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~-- 310 (502)
T 3hbx_A 254 --------------------FLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGAD-- 310 (502)
T ss_dssp --------------------HHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSC--
T ss_pred --------------------hhCccccccc-CCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCC--
Confidence 0011111111 13568999999999999999999999987654432222222222100
Q ss_pred CcccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHH
Q psy852 406 GAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARA 485 (891)
Q Consensus 406 ~~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~ 485 (891)
T Consensus 311 -------------------------------------------------------------------------------- 310 (502)
T 3hbx_A 311 -------------------------------------------------------------------------------- 310 (502)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe
Q psy852 486 QAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST 565 (891)
Q Consensus 486 ~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva 565 (891)
T Consensus 311 -------------------------------------------------------------------------------- 310 (502)
T 3hbx_A 311 -------------------------------------------------------------------------------- 310 (502)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccchhhhhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccc
Q psy852 566 TLGTTSCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRS 644 (891)
Q Consensus 566 taGTT~c~~~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~a 644 (891)
...+++.++|+ ..+
T Consensus 311 -----------------------------------------------------------------~~~~~~~~sr~~~~~ 325 (502)
T 3hbx_A 311 -----------------------------------------------------------------QPTFTLNFSKGSSQV 325 (502)
T ss_dssp -----------------------------------------------------------------EEECCSCCSCBSHHH
T ss_pred -----------------------------------------------------------------CCCccccCCchHHHH
Confidence 00123344665 367
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCC-CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcE
Q psy852 645 LKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND-VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRL 723 (891)
Q Consensus 645 L~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~ 723 (891)
+++|++++.+|.+|+.+++++..+++++|.+.|+++++|+++.+ +..++|+|++.+.. +.....+.+.|.++|++
T Consensus 326 ~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~----~~~~~~l~~~L~~~Gi~ 401 (502)
T 3hbx_A 326 IAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSS----CHTEFEISDMLRRYGWI 401 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCS----SCCHHHHHHHHHTTTCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCC----cCCHHHHHHHHHhCCcE
Confidence 89999999999999999999999999999999999999999987 78999999997531 11234889999999987
Q ss_pred E---EeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 724 H---MVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 724 ~---~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+ ..++...+..++ |+++..+|.+|+|.++++|+++..
T Consensus 402 v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 402 VPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp CCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 3 333444566778 999999999999999999998874
No 10
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.96 E-value=5.1e-29 Score=284.92 Aligned_cols=273 Identities=14% Similarity=0.115 Sum_probs=204.5
Q ss_pred ccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccccc
Q psy852 18 PRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIE 97 (891)
Q Consensus 18 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~ 97 (891)
||||+|+++. ++.++++.. |. .|..+|....+|..++.|+.+++|+|+.+.
T Consensus 68 ~r~~g~~hg~----~~~~d~l~~----~~-~~~~~~~~~~~e~~~~~~~~~~lGlp~~~~-------------------- 118 (450)
T 3bc8_A 68 RRHYRFIHGI----GRSGDISAV----QP-KAAGSSLLNKITNSLVLNVIKLAGVHSVAS-------------------- 118 (450)
T ss_dssp HHTTTCCSCB----CC-----------CC-SBHHHHHHHHHHHHHHHHHHHHHTCTTCCE--------------------
T ss_pred CCccceecch----hHHHHHHHh----Cc-cccCCcHHHHHHHHHHHHHHHhCCCCCCce--------------------
Confidence 7999999887 566788777 44 888999999999999999999999997642
Q ss_pred ccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEec---CCC
Q psy852 98 DYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP---DDK 174 (891)
Q Consensus 98 ~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~---d~~ 174 (891)
++ +++|+|-..++.++..+|..... .+. |+.+..+|.|+.||+.+.|...++|++ ++.
T Consensus 119 ~~--------lV~GaT~~~~a~~L~aar~~~~~----------~~~-viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~ 179 (450)
T 3bc8_A 119 CF--------VVPMATGMSLTLCFLTLRHKRPK----------AKY-IIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDE 179 (450)
T ss_dssp EE--------EESSCHHHHHHHHHHHHHHHCTT----------CCE-EEEECCCCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred EE--------EECCHHHHHHHHHHHHcchhhcC----------CCE-EEEECCcHHHHHHHHHHcCCeeEEEEeeecCcc
Confidence 11 23455434455566667774211 123 455566999999999998888777765 778
Q ss_pred CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCccc
Q psy852 175 NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSF 254 (891)
Q Consensus 175 g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~ 254 (891)
+.||+++|+++|+++.. ..+++|++|.+++.+|++|||++|+++|++||+|+|||+|||+.+.++++
T Consensus 180 ~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~----------- 246 (450)
T 3bc8_A 180 LRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMH----------- 246 (450)
T ss_dssp EECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHH-----------
T ss_pred CCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHh-----------
Confidence 99999999999988642 24688999999998899999999999999999999999999876532100
Q ss_pred ccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceE
Q psy852 255 DNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVW 334 (891)
Q Consensus 255 d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (891)
+
T Consensus 247 --------------------------------------------------l----------------------------- 247 (450)
T 3bc8_A 247 --------------------------------------------------L----------------------------- 247 (450)
T ss_dssp --------------------------------------------------H-----------------------------
T ss_pred --------------------------------------------------H-----------------------------
Confidence 0
Q ss_pred EEeeccccCccccCccccccccCC--CcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCcccccc
Q psy852 335 LHVDGAYAGSSFICPEFRPFMNGI--EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRH 412 (891)
Q Consensus 335 ~~~d~~~~~~~~~~~~~~~~~~gi--~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 412 (891)
.+ +++ +.||+++.|+|||+++|+++|++++||+..+.... ..|....
T Consensus 248 ----------------~~---~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~---~~~~g~~--------- 296 (450)
T 3bc8_A 248 ----------------IQ---QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KMYPGRA--------- 296 (450)
T ss_dssp ----------------HH---HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HHSCSCB---------
T ss_pred ----------------HH---HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHH---HHhhcCC---------
Confidence 00 111 35899999999999999999999999876654332 2333110
Q ss_pred cccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCC---ccccccC
Q psy852 413 WGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDP---RFEISND 467 (891)
Q Consensus 413 ~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~---~~eVv~~ 467 (891)
| ...+|++|++++.+|.+||++.+++.+++++++++.|++++ ++.+++.
T Consensus 297 -----s-~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~ 348 (450)
T 3bc8_A 297 -----S-ASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQT 348 (450)
T ss_dssp -----C-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCC
T ss_pred -----c-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCC
Confidence 0 11269999999999999999999999999999999999888 7777753
No 11
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.9e-26 Score=262.87 Aligned_cols=310 Identities=15% Similarity=0.174 Sum_probs=231.8
Q ss_pred cCCCCCCccccccCCCCC-CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q psy852 11 QVTHWQHPRFHAYFPSGN-SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTP 89 (891)
Q Consensus 11 ~~~~~~~p~~~~~~~~~~-~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp 89 (891)
..++|.||+|++++..+. ....++.+.+....+.|...|..+|...++|.++.+|+++++|++... .++
T Consensus 60 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~------~~~---- 129 (497)
T 3mc6_A 60 PHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDT------GCG---- 129 (497)
T ss_dssp CCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTT------CCE----
T ss_pred CCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCC------CeE----
Confidence 678999999999976553 455666677777677788888899999999999999999999998321 011
Q ss_pred CCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEE
Q psy852 90 NDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKIL 169 (891)
Q Consensus 90 ~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V 169 (891)
.+++||+. ++...+..+|......+ | ..+..|+++..+|+++.+++...|.+++.|
T Consensus 130 -----------------~~~~ggt~-a~~~a~~a~~~~~~~~~----g--~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v 185 (497)
T 3mc6_A 130 -----------------TTTSGGTE-SLLLACLSAKMYALHHR----G--ITEPEIIAPVTAHAGFDKAAYYFGMKLRHV 185 (497)
T ss_dssp -----------------EEESSHHH-HHHHHHHHHHHHHHHHS----C--CSSCEEEEETTSCHHHHHHHHHSCCEEEEE
T ss_pred -----------------EEcCcHHH-HHHHHHHHHHHHHHhcC----C--CCCceEEEeCCccHHHHHHHHHcCCeEEEE
Confidence 23567764 44444444444321101 1 123468999999999999998888899999
Q ss_pred ecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccC
Q psy852 170 EPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFM 248 (891)
Q Consensus 170 ~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~ 248 (891)
++|+ +|++|+++|+++++++ |.+|+++.++|.+|.++|+++|+++|+++|+|+|+|+||||+..-+.+..+
T Consensus 186 ~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~-- 257 (497)
T 3mc6_A 186 ELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAG-- 257 (497)
T ss_dssp CBCTTTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTT--
T ss_pred ecCcccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhc--
Confidence 9998 8999999999988654 579999999999999999999999999999999999999875431100000
Q ss_pred CCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccc
Q psy852 249 NGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRD 328 (891)
Q Consensus 249 ~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (891)
T Consensus 258 -------------------------------------------------------------------------------- 257 (497)
T 3mc6_A 258 -------------------------------------------------------------------------------- 257 (497)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCcc
Q psy852 329 AIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAI 408 (891)
Q Consensus 329 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~ 408 (891)
++ ..|.+... ...+|+++.++|||+++|+++|+++++++......+...+.|....
T Consensus 258 ------------~~----~~~~~~~~---~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----- 313 (497)
T 3mc6_A 258 ------------YK----NLPLLDFR---VPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL----- 313 (497)
T ss_dssp ------------CC----SCCCCSTT---STTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC-----
T ss_pred ------------cc----CCcccccc---CCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC-----
Confidence 00 00111111 1246999999999999999999999998654332223334444322
Q ss_pred cccccccCCCCChh-HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhcc-CCccccccC
Q psy852 409 DYRHWGIPLSRRFR-SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR-DPRFEISND 467 (891)
Q Consensus 409 ~~~~~~~~~sr~~~-~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~-~~~~eVv~~ 467 (891)
+...++.++|... .+++|++++.+|.+|+.+++++..++++++.+.|.+ .++++++++
T Consensus 314 -~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~ 373 (497)
T 3mc6_A 314 -YGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN 373 (497)
T ss_dssp -BCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC
T ss_pred -cCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 2455677787765 568999999999999999999999999999999999 699998865
No 12
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.93 E-value=7.4e-25 Score=255.29 Aligned_cols=317 Identities=18% Similarity=0.140 Sum_probs=238.9
Q ss_pred hhHhhccCCCCCCccccccCCC-CCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCC
Q psy852 5 FHFLSHQVTHWQHPRFHAYFPS-GNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQG 83 (891)
Q Consensus 5 ~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~ 83 (891)
-..+.++.++|.+|+|++++.. ....+..+.+.+....+.|...+..+|...++|.++.+|+++++|++....
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~------ 159 (514)
T 3mad_A 86 AAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGG------ 159 (514)
T ss_dssp HHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTS------
T ss_pred HHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccC------
Confidence 3445677889999999999865 456778899999999999988899999999999999999999999984210
Q ss_pred CCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcC
Q psy852 84 KNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 163 (891)
Q Consensus 84 ~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~ 163 (891)
. +++ .+++||+.. +...+..+|...+. +.| ..+..|+++..+|+++.+++...|
T Consensus 160 -~----------v~~--------~~t~ggt~a-~~~al~a~~~~g~~----~~g--~~~d~Vi~~~~~~~~~~~~~~~~G 213 (514)
T 3mad_A 160 -T----------VCG--------TVTSGGTES-LLLAMKTYRDWARA----TKG--ITAPEAVVPVSAHAAFDKAAQYFG 213 (514)
T ss_dssp -C----------CEE--------EEESSHHHH-HHHHHHHHHHHHHH----HHC--CSSCEEEEETTSCTHHHHHHHHHT
T ss_pred -C----------cce--------EEcCcHHHH-HHHHHHHHHHHhhh----hcC--CCCCeEEEeCccchHHHHHHHHcC
Confidence 0 011 235677654 44444444443110 011 133568999999999999998878
Q ss_pred CeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCC
Q psy852 164 VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPE 243 (891)
Q Consensus 164 ~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~ 243 (891)
.+++.|++|++|++|+++|+++|+++ +.+|+++.++|.+|.++|+++|+++|+++|+|||+|+||||+...+..
T Consensus 214 ~~v~~v~~~~~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~ 287 (514)
T 3mad_A 214 IKLVRTPLDADYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAE 287 (514)
T ss_dssp CEEEEECBCTTSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHH
T ss_pred CeeEEeeeCCCCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHH
Confidence 89999999999999999999998754 568899999999999999999999999999999999999886531000
Q ss_pred CCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccc
Q psy852 244 FRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHI 323 (891)
Q Consensus 244 ~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (891)
. +..
T Consensus 288 ~--------------------------------------------~g~-------------------------------- 291 (514)
T 3mad_A 288 R--------------------------------------------LGY-------------------------------- 291 (514)
T ss_dssp H--------------------------------------------TTC--------------------------------
T ss_pred h--------------------------------------------cCC--------------------------------
Confidence 0 000
Q ss_pred ccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCC
Q psy852 324 QSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHG 403 (891)
Q Consensus 324 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~ 403 (891)
..+.+... ...+|++++++|||+++|+++|+++++++..........+.|...
T Consensus 292 -----------------------~~~~~~~~---~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~- 344 (514)
T 3mad_A 292 -----------------------PVPPFDFR---LEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG- 344 (514)
T ss_dssp -----------------------CCCCCSTT---STTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC-
T ss_pred -----------------------CCCccccc---CCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC-
Confidence 00111111 124699999999999999999999999875443222222222221
Q ss_pred CCCcccccccccCCCCChh-HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 404 HEGAIDYRHWGIPLSRRFR-SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 404 ~~~~~~~~~~~~~~sr~~~-~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
.+..+++.++|... .+++|++++.+|.+|+.+++++..++++++.+.|.+.++++++.+
T Consensus 345 -----~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 404 (514)
T 3mad_A 345 -----LYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGD 404 (514)
T ss_dssp -----SEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSC
T ss_pred -----cccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCC
Confidence 13356778888876 689999999999999999999999999999999999989988865
No 13
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.91 E-value=3.3e-24 Score=246.55 Aligned_cols=248 Identities=14% Similarity=0.146 Sum_probs=184.5
Q ss_pred ccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhc
Q psy852 48 SWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQ 127 (891)
Q Consensus 48 ~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~ 127 (891)
.|..+|.+.++|.++.+++++++|++.. ++ +++|||..+|...+..+|..
T Consensus 124 ~~~~~~~~~~~~~~~~~~la~~~g~~~~---------~~---------------------~t~g~te~a~~~al~~~~~~ 173 (456)
T 2z67_A 124 KASGASIMYALTNKILESFFKQLGLNVH---------AI---------------------ATPISTGMSISLCLSAARKK 173 (456)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHTTCCCE---------EE---------------------EESSCHHHHHHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHHHHHHHHHcCCCCC---------EE---------------------EeCcHHHHHHHHHHHHHHHh
Confidence 4566778999999999999999999743 11 35677755555333334442
Q ss_pred cccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEec---CCCCcccHHHHHHHHHhhhhcCCcceEEEeecc
Q psy852 128 KKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP---DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLG 204 (891)
Q Consensus 128 ~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~---d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~G 204 (891)
. ++..|+++..+|+|+.+++...|.+++.|++ |++|.+|+++|+++|+.+..++ .+++|+.+.+
T Consensus 174 ~------------~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~-~~~~vv~~~~ 240 (456)
T 2z67_A 174 Y------------GSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELG-NRPCVLSTLT 240 (456)
T ss_dssp H------------CCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTT-CCEEEEEESS
T ss_pred c------------CCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCC-CeEEEEEeCC
Confidence 1 1123555666999999999888888888886 7889999999999994321112 3678889999
Q ss_pred cCccccccCHHHHHHHHHHcCCceeeeccccCCcc-ccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHH
Q psy852 205 TTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSF-ICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARA 283 (891)
Q Consensus 205 tt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~-~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~ 283 (891)
||.+|.++|+++|+++|+++|+|+|||+|||+... ..
T Consensus 241 nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~------------------------------------------ 278 (456)
T 2z67_A 241 FFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYL------------------------------------------ 278 (456)
T ss_dssp CCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHH------------------------------------------
T ss_pred CCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhh------------------------------------------
Confidence 99999999999999999999999999999965432 00
Q ss_pred HHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccE
Q psy852 284 QAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADS 363 (891)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds 363 (891)
+.....+.+ .+|+
T Consensus 279 -----------------------------------------------------------------~~~~~~~~~--~~D~ 291 (456)
T 2z67_A 279 -----------------------------------------------------------------EKLKKAFKY--RVDA 291 (456)
T ss_dssp -----------------------------------------------------------------HHHHHHHTS--CCSE
T ss_pred -----------------------------------------------------------------HHHHHhhCC--CCCE
Confidence 000011112 4799
Q ss_pred EEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCcccccccccCCCCC-hhHHHHHHHHHHhcHHHHHHHH
Q psy852 364 FNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRTYGLSGLQKYI 442 (891)
Q Consensus 364 ~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~sr~-~~~l~~w~~l~~~g~~G~~~ii 442 (891)
+++++|||+++|+++|++++|++..+.. + .+.|.. .+. ..++++|+++..+|.+|+.+++
T Consensus 292 ~~~s~hK~~~~p~g~G~l~~~~~~~~~~-l--~~~~~g----------------~~~~~~~~~~~aal~~l~~~~~~~~~ 352 (456)
T 2z67_A 292 VVSSSDKNLLTPIGGGLVYSTDAEFIKE-I--SLSYPG----------------RASATPVVNTLVSLLSMGSKNYLELV 352 (456)
T ss_dssp EEEEHHHHHCCCSSCEEEEESCHHHHHH-H--HTTSCS----------------CBCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCcCCCCCeEEEEEcCHHHHhh-c--CcCCCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987643332 2 333432 111 1378999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCC---cccccc
Q psy852 443 RRHCELAKLFEGKVRRDP---RFEISN 466 (891)
Q Consensus 443 ~~~lelAr~l~~~L~~~~---~~eVv~ 466 (891)
++..++++++.+.|.+.+ ++.++.
T Consensus 353 ~~~~~~~~~l~~~L~~~~~~~g~~v~~ 379 (456)
T 2z67_A 353 KNQKNSKKLLDELLNDLSKKTGGKFLD 379 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCBCC
T ss_pred HHHHHHHHHHHHHHHhcccccCCEecC
Confidence 999999999999998875 666654
No 14
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.86 E-value=7.7e-20 Score=202.23 Aligned_cols=314 Identities=16% Similarity=0.097 Sum_probs=220.0
Q ss_pred hHhhccCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q psy852 6 HFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKN 85 (891)
Q Consensus 6 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g 85 (891)
..+.+...+|.+|+|+++..+++. |.++..+.. .+..+...+...|...+++.++.+++++++|.+....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i-------- 89 (397)
T 3f9t_A 20 KKYRSLDLKYEDGNIFGSMCSNVL-PITRKIVDI-FLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYG-------- 89 (397)
T ss_dssp HHHHTTSCCGGGTCBCSCSCCCCC-THHHHHHHH-HTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEE--------
T ss_pred HHhhccCCCCCCCCeEEEecCCCc-HHHHHHHHH-HHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCE--------
Confidence 345677788999999999976544 555544444 4443333344567889999999999999999875421
Q ss_pred CCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccc-cccCCeEEEecCCCChHHHHHHHHcCC
Q psy852 86 ATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEG-VLLSKLMAYCSKEAHSCVEKAAMMAFV 164 (891)
Q Consensus 86 ~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g-~~~~~~~v~~S~~~H~Sv~kaa~~~~~ 164 (891)
.+++||+... ...+..++...... ..+| ...++..|+++..+|+++.+++...|.
T Consensus 90 ---------------------~~~~ggt~a~-~~~~~~~~~~~~~~--~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~ 145 (397)
T 3f9t_A 90 ---------------------HIVSGGTEAN-LMALRCIKNIWREK--RRKGLSKNEHPKIIVPITAHFSFEKGREMMDL 145 (397)
T ss_dssp ---------------------EEESCHHHHH-HHHHHHHHHHHHHH--HHTTCCCCSSCEEEEETTCCTHHHHHHHHHTC
T ss_pred ---------------------EEecCcHHHH-HHHHHHHHHHHHhh--hhhcccCCCCeEEEECCcchhHHHHHHHHcCc
Confidence 1356787543 33333332210000 0000 011344688899999999999987788
Q ss_pred eEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCC
Q psy852 165 RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEF 244 (891)
Q Consensus 165 ~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~ 244 (891)
+++.||+|+++.+|+++|++.+++. .+.+|+++.++|.+|.++|+++|.++|+++|+++|+|.||+|+.+-....
T Consensus 146 ~~~~v~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~ 220 (397)
T 3f9t_A 146 EYIYAPIKEDYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDD 220 (397)
T ss_dssp EEEEECBCTTSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCG
T ss_pred eeEEEeeCCCCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccc
Confidence 9999999999999999999999873 14588888899999999999999999999999999999997764311000
Q ss_pred CccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccc
Q psy852 245 RPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQ 324 (891)
Q Consensus 245 ~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (891)
.. .+.
T Consensus 221 ~~-----------~~~---------------------------------------------------------------- 225 (397)
T 3f9t_A 221 KY-----------KKK---------------------------------------------------------------- 225 (397)
T ss_dssp GG-----------CCT----------------------------------------------------------------
T ss_pred cc-----------ccc----------------------------------------------------------------
Confidence 00 000
Q ss_pred cccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCC
Q psy852 325 SYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGH 404 (891)
Q Consensus 325 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~ 404 (891)
+ +...+ .+.. .+|++++++||++++|.++|.++++++.... .+....+|+....
T Consensus 226 -------~--------------~~~~~--~~~~--~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 279 (397)
T 3f9t_A 226 -------G--------------VNYKF--DFSL--GVDSITIDPHKMGHCPIPSGGILFKDIGYKR-YLDVDAPYLTETR 279 (397)
T ss_dssp -------T--------------CCCCC--SGGG--TCSEEECCTTTTTCCCSSCEEEEESSGGGGG-GTCEECTTSSSSE
T ss_pred -------c--------------ccccc--cccc--cCCeEEEccccccCCCCCceEEEEeCHHHHH-hhccCCccccCCC
Confidence 0 00000 0011 4699999999999999999999998765432 2333345554321
Q ss_pred CCcccccccccCCCCCh-hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 405 EGAIDYRHWGIPLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 405 ~~~~~~~~~~~~~sr~~-~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
..++.++|.. ..+++|++++.++..++.+++++..++++++.+.|++. +++++.+
T Consensus 280 -------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 335 (397)
T 3f9t_A 280 -------QATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIE 335 (397)
T ss_dssp -------ECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSC
T ss_pred -------ccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcC
Confidence 3345567764 56889999999999999999999999999999999987 7777654
No 15
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.82 E-value=4.8e-19 Score=205.18 Aligned_cols=178 Identities=39% Similarity=0.707 Sum_probs=137.8
Q ss_pred HHHHHHHHHHhhccCCcc-------ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchH
Q psy852 445 HCELAKLFEGKVRRDPRF-------EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHS 517 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~-------eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~ 517 (891)
+.++++++.+.+.--+.+ .--+-+++|||++|++|+++||+++.++.+..++...+....++++||+|+.+|+
T Consensus 120 E~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~ 199 (481)
T 4e1o_A 120 EMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHS 199 (481)
T ss_dssp HHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCH
T ss_pred HHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchH
Confidence 344555666666432221 0012378999999999999999988776543233222222357889999999999
Q ss_pred HHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhh-----h----
Q psy852 518 CVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYR-----K---- 575 (891)
Q Consensus 518 Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~-----~---- 575 (891)
|+.|++.++|.+++.||+|++|+||+++|+++|+++.+.+..|++|+++.|+|. |++ |
T Consensus 200 s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA 279 (481)
T 4e1o_A 200 SVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAA 279 (481)
T ss_dssp HHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehh
Confidence 999999999999999999999999999999999998888888999999998886 332 2
Q ss_pred --------------hcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccc
Q psy852 576 --------------SQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQ 622 (891)
Q Consensus 576 --------------ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~ 622 (891)
+.|++.+||+++|+|||+++|++||++++|++..+.+.+...+.|+.
T Consensus 280 ~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~ 340 (481)
T 4e1o_A 280 YAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLR 340 (481)
T ss_dssp TGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGC
T ss_pred hHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhcc
Confidence 23566789999999999999999999999999777666655556653
No 16
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.82 E-value=4.3e-19 Score=205.37 Aligned_cols=275 Identities=32% Similarity=0.550 Sum_probs=179.9
Q ss_pred HHHHHHHHHHhhccCCcc--------ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccch
Q psy852 445 HCELAKLFEGKVRRDPRF--------EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAH 516 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~--------eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH 516 (891)
+.++++++.+.+..-+.+ ..+ +|+|||++|++|+++||+++.++.+..++...++...++++||+|+.+|
T Consensus 115 E~~v~~~l~~~~g~~~~~~~~~~~~~~gv--~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H 192 (475)
T 3k40_A 115 EVVMMDWLGKMLELPAEFLACSGGKGGGV--IQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAH 192 (475)
T ss_dssp HHHHHHHHHHHTTCCGGGCGGGTSSCEEE--EESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSC
T ss_pred HHHHHHHHHHHhCCCchhccccCCCCCeE--EcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCch
Confidence 344556666666543222 233 7899999999999999998876543222222222234678999999999
Q ss_pred HHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhh-----h---
Q psy852 517 SCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYR-----K--- 575 (891)
Q Consensus 517 ~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~-----~--- 575 (891)
+|+.|++.++|++++.||+|++| ||+++|+++|+++.+.+..|++|+.+.|+|. |++ |
T Consensus 193 ~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~ 271 (475)
T 3k40_A 193 SSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDA 271 (475)
T ss_dssp HHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeH
Confidence 99999999999999999999999 9999999999998888888999999988876 332 2
Q ss_pred ---------------hcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccc
Q psy852 576 ---------------SQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSR 640 (891)
Q Consensus 576 ---------------ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SR 640 (891)
+.|++.+||+++|+|||+++|++||++++|++..+.+.+...+.|+...
T Consensus 272 A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~---------------- 335 (475)
T 3k40_A 272 AYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHD---------------- 335 (475)
T ss_dssp TTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC------------------------------
T ss_pred HhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCC----------------
Confidence 3456678999999999999999999999999877665555445554310
Q ss_pred cccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhC
Q psy852 641 RFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINAS 720 (891)
Q Consensus 641 r~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~ 720 (891)
..+ +. .. ..-+.+.... ....-.+...|..-
T Consensus 336 ------------~~~--~~---------------------~~----------~~~~~~~~sr----~~~~l~l~~al~~~ 366 (475)
T 3k40_A 336 ------------MQG--SA---------------------PD----------YRHWQIPLGR----RFRALKLWFVLRLY 366 (475)
T ss_dssp ----------------------------------------------------------CCCG----GGTHHHHHHHHHHH
T ss_pred ------------cCC--CC---------------------CC----------cccccccCCC----cccHHHHHHHHHHH
Confidence 000 00 00 0000000000 00011111111110
Q ss_pred CcEEEeeccccCCeEEEEecCCCCHHHHHHHHHHHHHHHHHHHHhhhccCcccccCCCcccceEEeecccchhhhhhhhH
Q psy852 721 GRLHMVPASQEQNDEVFELQERKRKDDLAYKRSFFVRMLGLVCFRLRSENNLIADHPLQLGLVCFRLRSENNVIADQNNR 800 (891)
Q Consensus 721 G~~~~s~s~~~g~~~l~sv~~~tT~edId~li~~L~ei~~~~~~~l~~~~~~~~~~~~~~gl~~~r~~~~~~~~~~~~~~ 800 (891)
..+.++..++...+.++.+.+.|++.+.|++..+...++||||+++. +..++
T Consensus 367 -----------------------g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~-----~~~~~ 418 (475)
T 3k40_A 367 -----------------------GVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGS-----NERNE 418 (475)
T ss_dssp -----------------------HHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSC-----HHHHH
T ss_pred -----------------------hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCc-----hHHHH
Confidence 23456677777778888888888887777776777889999999763 23455
Q ss_pred HHHHHHHhhccccCC
Q psy852 801 KLLEDINASGRLHMV 815 (891)
Q Consensus 801 ~~~~~~~~~~~~~~~ 815 (891)
++.++++..|.....
T Consensus 419 ~l~~~L~~~g~~~~~ 433 (475)
T 3k40_A 419 ALLKRINGRGHIHLV 433 (475)
T ss_dssp HHHHHHHHHTSCBCE
T ss_pred HHHHHHHhCCcEEEE
Confidence 777888877766543
No 17
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.82 E-value=9e-20 Score=206.81 Aligned_cols=237 Identities=14% Similarity=0.129 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHH-HHHHHHHhccccCCc
Q psy852 55 CTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQ-NIIVLTRGQKKIHPF 133 (891)
Q Consensus 55 ~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~-~~~~~ar~~~~~~~~ 133 (891)
...-|..+++||.++ |+|.... + |...|++..+. .++..+|... |
T Consensus 115 ~~ltn~l~ld~L~~~-G~~~~~~---------------------~--------flVnGsTgg~lamilaa~r~~r---p- 160 (501)
T 3hl2_A 115 NKITNSLVLDIIKLA-GVHTVAN---------------------C--------FVVPMATGMSLTLCFLTLRHKR---P- 160 (501)
T ss_dssp HHHHHHHHHHHHHHT-TCTTCCE---------------------E--------EEESSCHHHHHHHHHHHHHHHC---T-
T ss_pred HHHHHHHHHHHHHHc-CCCCCCc---------------------E--------EEECcHHHHHHHHHHHHcCccc---C-
Confidence 457789999999999 9996521 1 11223222333 3333345431 1
Q ss_pred cccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEec---CCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcccc
Q psy852 134 VDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP---DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCS 210 (891)
Q Consensus 134 ~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~---d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Ga 210 (891)
....|+.+..+|.|+.|++.+.|...++|++ ++...+|+++|+++|++... ...++|+.|..++..++
T Consensus 161 -------g~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga--~~i~~V~~Ttt~y~p~~ 231 (501)
T 3hl2_A 161 -------KAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGP--DCILCIHSTTSCFAPRV 231 (501)
T ss_dssp -------TCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCG--GGEEEEEEECSCCTTBC
T ss_pred -------CCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCC--CcEEEEEecCCCCCCcc
Confidence 1123667999999999999999999999887 55789999999999997621 11234444433333568
Q ss_pred ccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhc
Q psy852 211 FDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLK 290 (891)
Q Consensus 211 vDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 290 (891)
+|||++|+++|++||+|+|||.|||+.+.++++.
T Consensus 232 ~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~l---------------------------------------------- 265 (501)
T 3hl2_A 232 PDRLEELAVICANYDIPHIVNNAYGVQSSKCMHL---------------------------------------------- 265 (501)
T ss_dssp CCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHH----------------------------------------------
T ss_pred cccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhh----------------------------------------------
Confidence 8999999999999999999999998765332100
Q ss_pred ccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCC
Q psy852 291 KIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNK 370 (891)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK 370 (891)
.. ..++ ...||.++.|+||
T Consensus 266 ----------p~--------------------------------------------------sA~~-~GrAD~vVqS~HK 284 (501)
T 3hl2_A 266 ----------IQ--------------------------------------------------QGAR-VGRIDAFVQSLDK 284 (501)
T ss_dssp ----------HH--------------------------------------------------HHHH-HSCCCEEEEEHHH
T ss_pred ----------HH--------------------------------------------------HHHh-cCCCcEEEecccc
Confidence 00 0000 0137999999999
Q ss_pred cCCccCCceEEEEeccccchhhcccCccccCCCCCCcccccccccCCCC-ChhHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy852 371 WLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSR-RFRSLKLWFVIRTYGLSGLQKYIRRHCELA 449 (891)
Q Consensus 371 ~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~sr-~~~~l~~w~~l~~~g~~G~~~ii~~~lelA 449 (891)
++++|.++++++.||+..+... ...|. |.+ ++.++++|++++.+|++||+++++++++++
T Consensus 285 ~llvpIGG~ii~~~d~e~l~~~---~~~yP----------------Gr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela 345 (501)
T 3hl2_A 285 NFMVPVGGAIIAGFNDSFIQEI---SKMYP----------------GRASASPSLDVLITLLSLGSNGYKKLLKERKEMF 345 (501)
T ss_dssp HHCCCSSCEEEEESCHHHHHHH---HHTSC----------------SCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeecCceEEEeCCHHHHHHH---HHhCC----------------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999889889987655432 22232 233 456899999999999999999999999999
Q ss_pred HHHHHhhccCC
Q psy852 450 KLFEGKVRRDP 460 (891)
Q Consensus 450 r~l~~~L~~~~ 460 (891)
+||.+.|++..
T Consensus 346 ~~L~~~L~~la 356 (501)
T 3hl2_A 346 SYLSNQIKKLS 356 (501)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998743
No 18
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.81 E-value=6.3e-19 Score=203.94 Aligned_cols=280 Identities=13% Similarity=0.166 Sum_probs=206.3
Q ss_pred HHHHHHHHHHhhccC-CccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH
Q psy852 445 HCELAKLFEGKVRRD-PRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA 523 (891)
Q Consensus 445 ~lelAr~l~~~L~~~-~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa 523 (891)
..++++++++.+... +.-.++ +++|+++++..++.++|+....+. |. .+..|+++..+|+++.+++
T Consensus 109 ~~~~~~~la~~~g~~~~~~~~~--~~~ggt~a~~~a~~a~~~~~~~~~---------g~--~~~~Vi~~~~~h~~~~~~~ 175 (497)
T 3mc6_A 109 ESEVVSMVLRMFNAPSDTGCGT--TTSGGTESLLLACLSAKMYALHHR---------GI--TEPEIIAPVTAHAGFDKAA 175 (497)
T ss_dssp HHHHHHHHHHHTTCCTTTCCEE--EESSHHHHHHHHHHHHHHHHHHHS---------CC--SSCEEEEETTSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCeEE--EcCcHHHHHHHHHHHHHHHHHhcC---------CC--CCceEEEeCCccHHHHHHH
Confidence 345556666666543 122444 678999999999999988654321 21 2457999999999999999
Q ss_pred HHcCceEEEecCCC-CCCcCHHHHHHHHHhhhhcCCccEEEEecCCc-----cc--------hhh-----hhcC------
Q psy852 524 MMAFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGT-----TS--------CYR-----KSQG------ 578 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~-~G~mD~~~Le~aI~~d~~~g~ip~~VvataGT-----T~--------c~~-----~ldG------ 578 (891)
.+.|++++.||+++ ++++|+++|+++|+++ +.+|+.+.++ .. |.+ ++|+
T Consensus 176 ~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~ 249 (497)
T 3mc6_A 176 YYFGMKLRHVELDPTTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFI 249 (497)
T ss_dssp HHSCCEEEEECBCTTTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHH
T ss_pred HHcCCeEEEEecCcccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhh
Confidence 99999999999988 8999999999998753 4455544433 22 433 1221
Q ss_pred ------------------CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccc
Q psy852 579 ------------------IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSR 640 (891)
Q Consensus 579 ------------------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SR 640 (891)
..++|++++++|||+++|.++|+++++++..........+.|... .....++.++|
T Consensus 250 ~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~ 323 (497)
T 3mc6_A 250 VSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGG------LYGSPTLAGSR 323 (497)
T ss_dssp HGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTS------CBCCSSSCSSC
T ss_pred hhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCC------CcCCcCcccCC
Confidence 235899999999999999999999999875433222223333321 12344555555
Q ss_pred c-ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH
Q psy852 641 R-FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN 718 (891)
Q Consensus 641 r-~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~ 718 (891)
. ...+.+|++++.++.+|+.+.+++..++++++.+.|++ +++++++.++..++++|+..+. ...++.+.|.
T Consensus 324 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~-------~~~~l~~~L~ 396 (497)
T 3mc6_A 324 PGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTL-------NIHELSDRLS 396 (497)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTT-------THHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCC-------CHHHHHHHHH
Confidence 4 33567999999999999999999999999999999999 6999999888999999987532 4578899999
Q ss_pred hCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 719 ASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 719 ~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
++|+.+.... ....+ +++. .+|++|+|+++++|+++..
T Consensus 397 ~~Gi~v~~~~---~~~~~ri~~~-~~t~e~i~~~~~~L~~~l~ 435 (497)
T 3mc6_A 397 KKGWHFNALQ---KPVALHMAFT-RLSAHVVDEICDILRTTVQ 435 (497)
T ss_dssp TTTCBCEECC---SSCCEEEECC-TTTTCTHHHHHHHHHHHHH
T ss_pred hCCEEEecCC---CCCeEEEEEe-CCCHHHHHHHHHHHHHHHH
Confidence 9998643221 12235 7776 6799999999999998874
No 19
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.79 E-value=8.3e-18 Score=195.80 Aligned_cols=280 Identities=17% Similarity=0.157 Sum_probs=203.8
Q ss_pred HHHHHHHHHhhccCC--ccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH
Q psy852 446 CELAKLFEGKVRRDP--RFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA 523 (891)
Q Consensus 446 lelAr~l~~~L~~~~--~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa 523 (891)
.++++++++.+...+ . .+.+-+++|++++|..++.++|....++. | ..+..|+++..+|.++.+++
T Consensus 142 ~~l~~~la~~~g~~~~~~-~v~~~~t~ggt~a~~~al~a~~~~g~~~~---------g--~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 142 AEVVAMTAHMLGGDAAGG-TVCGTVTSGGTESLLLAMKTYRDWARATK---------G--ITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp HHHHHHHHHHTTGGGGTS-CCEEEEESSHHHHHHHHHHHHHHHHHHHH---------C--CSSCEEEEETTSCTHHHHHH
T ss_pred HHHHHHHHHHcCCCCccC-CcceEEcCcHHHHHHHHHHHHHHHhhhhc---------C--CCCCeEEEeCccchHHHHHH
Confidence 345556666665431 1 23122788999999999999987654321 1 23467999999999999999
Q ss_pred HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecC-----Cccc--------hhh-----hhcC-------
Q psy852 524 MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTL-----GTTS--------CYR-----KSQG------- 578 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvata-----GTT~--------c~~-----~ldG------- 578 (891)
.+.|++++.||+++++++|+++|+++|+++ +.+|+.+. |... |.+ ++|+
T Consensus 210 ~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~ 283 (514)
T 3mad_A 210 QYFGIKLVRTPLDADYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFIL 283 (514)
T ss_dssp HHHTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTH
T ss_pred HHcCCeeEEeeeCCCCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccc
Confidence 999999999999999999999999999763 33344333 3332 433 1222
Q ss_pred ----------------CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccc
Q psy852 579 ----------------IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRF 642 (891)
Q Consensus 579 ----------------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~ 642 (891)
..++|++++++|||+++|.++|+++++++............|... .....++.++|..
T Consensus 284 ~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~gs~~~ 357 (514)
T 3mad_A 284 PWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG------LYFSPTFAGSRPG 357 (514)
T ss_dssp HHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC------SEEESSSCSSCCH
T ss_pred hhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC------cccCCccCCCCch
Confidence 245799999999999999999999999875443222222223211 1223455667654
Q ss_pred c-chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCC
Q psy852 643 R-SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASG 721 (891)
Q Consensus 643 ~-aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G 721 (891)
. .+.+|++++.++..++++.+++..++++++.+.|+++++++++.++ .++++|+..+. ...++.+.|.++|
T Consensus 358 ~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~-------~~~~l~~~L~~~G 429 (514)
T 3mad_A 358 ALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDEL-------NIYQVMEEMAGRG 429 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSSS-------CHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCCC-------CHHHHHHHHHhcC
Confidence 4 6799999999999999999999999999999999999999998766 45888876432 3567889999999
Q ss_pred cEEEeeccccCCeEE-EEec-CCCCHHHHHHHHHHHHHHHH
Q psy852 722 RLHMVPASQEQNDEV-FELQ-ERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 722 ~~~~s~s~~~g~~~l-~sv~-~~tT~edId~li~~L~ei~~ 760 (891)
+.+ .+.. ....+ +++. ..+++++|+++++.|++++.
T Consensus 430 i~v-~g~~--~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~ 467 (514)
T 3mad_A 430 WRL-NGLH--RPPAFHVALTLRHTEPGVVDRFLADLQDAVA 467 (514)
T ss_dssp CBC-EEET--TTTEEEEECCGGGGSTTHHHHHHHHHHHHHH
T ss_pred CEe-ccCC--CCCeEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 875 3322 23446 8776 46788999999999998874
No 20
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.75 E-value=9.8e-16 Score=168.35 Aligned_cols=170 Identities=14% Similarity=0.079 Sum_probs=125.1
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCC---CCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIGC---IGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMN 95 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~ 95 (891)
.|+++..+++..|.++..+...+.+. ....+..+.....+..++.+++++++|.+....
T Consensus 2 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i------------------ 63 (382)
T 4hvk_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTV------------------ 63 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEE------------------
T ss_pred EeecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeE------------------
Confidence 37888877777787777666654321 222344556678888999999999999864321
Q ss_pred ccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHH---cCCeEEEEecC
Q psy852 96 IEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM---AFVRLKILEPD 172 (891)
Q Consensus 96 ~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~---~~~~v~~V~~d 172 (891)
.+++||+....+.+..+.+... .+...|+++..+|++...++.. .|.+++.|++|
T Consensus 64 -----------~~~~g~~~a~~~~~~~~~~~~~-----------~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 121 (382)
T 4hvk_A 64 -----------VFTSGATEANNLAIIGYAMRNA-----------RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG 121 (382)
T ss_dssp -----------EEESSHHHHHHHHHHHHHHHHG-----------GGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC
T ss_pred -----------EEECCchHHHHHHHHHhhhhhc-----------CCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC
Confidence 1356776443333333332110 0122488889999999888743 57899999999
Q ss_pred CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeecccc
Q psy852 173 DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 173 ~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
++|.+|+++|++.+++. +.+|+++..+|.+|.+.|+++|.++|+++|+ +|+|+|++
T Consensus 122 ~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~ 177 (382)
T 4hvk_A 122 KYGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATAS 177 (382)
T ss_dssp TTSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTT
T ss_pred CCCCcCHHHHHHHhccC------ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHh
Confidence 99999999999998654 4689999999999999999999999999999 99999883
No 21
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.75 E-value=2e-16 Score=182.64 Aligned_cols=290 Identities=16% Similarity=0.116 Sum_probs=194.8
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccc-cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcc
Q psy852 15 WQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWA-ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDID 93 (891)
Q Consensus 15 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~ 93 (891)
+.+..|++ -.++...|.++..+.....+.+..... .++...+++.++.+++++++|++...
T Consensus 65 ~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~~----------------- 126 (474)
T 1wyu_B 65 DTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDAIT----------------- 126 (474)
T ss_dssp TTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEE-----------------
T ss_pred ccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCcee-----------------
Confidence 45667777 344445577777777664333333333 58889999999999999999987421
Q ss_pred ccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC
Q psy852 94 MNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD 173 (891)
Q Consensus 94 ~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~ 173 (891)
.+++||+. ++...+.++|..... + |...++..|+++..+|.+..+++...|.+++.|++|+
T Consensus 127 -------------~~~~ggt~-a~~~al~~~~~~~~~-~----Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~ 187 (474)
T 1wyu_B 127 -------------LEPAAGAH-GELTGILIIRAYHED-R----GEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP 187 (474)
T ss_dssp -------------CCCSSHHH-HHHHHHHHHHHHHHH-T----TCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT
T ss_pred -------------ecChHHHH-HHHHHHHHHHHHHHh-c----CCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC
Confidence 13467764 444434444432000 0 0001233588888999999999988888999999999
Q ss_pred CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc-cCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCc
Q psy852 174 KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF-DNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKT 252 (891)
Q Consensus 174 ~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav-Dpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~ 252 (891)
+|.+|+++|+++++++ +.+|+++..| .+|.+ +|+++|+++|+++|+++|+|+|++.... |
T Consensus 188 ~~~~d~~~L~~~i~~~------t~~v~~~~pn-~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~----------g-- 248 (474)
T 1wyu_B 188 EGEVDLEALKRELGPH------VAALMLTNPN-TLGLFERRILEISRLCKEAGVQLYYDGANLNAIM----------G-- 248 (474)
T ss_dssp TSSBCHHHHHHHCSTT------EEEEEECSSC-TTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTT----------T--
T ss_pred CCCcCHHHHHHhhCCC------ceEEEEECCC-CCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhc----------c--
Confidence 9999999999998754 3467777775 59999 8999999999999999999999832110 0
Q ss_pred ccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccc
Q psy852 253 SFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFD 332 (891)
Q Consensus 253 ~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (891)
+
T Consensus 249 --------------~----------------------------------------------------------------- 249 (474)
T 1wyu_B 249 --------------W----------------------------------------------------------------- 249 (474)
T ss_dssp --------------T-----------------------------------------------------------------
T ss_pred --------------C-----------------------------------------------------------------
Confidence 0
Q ss_pred eEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccC-----CceEEEEeccccchhhcccCccccCCCCCC-
Q psy852 333 VWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAF-----DSSCLWVADRYKLTSALVVDPLYLQHGHEG- 406 (891)
Q Consensus 333 ~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~-----~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~- 406 (891)
+.+ .. ..+|.+++++||++++|+ ++|++++++.. ...+. ..++......
T Consensus 250 --------------~~~--~~-----~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l--~~~l~--~~~~~~~g~~~ 304 (474)
T 1wyu_B 250 --------------ARP--GD-----MGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL--APYLP--VPLVERGEEGF 304 (474)
T ss_dssp --------------CCH--HH-----HTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG--GGGCC--SCEEEECSSCE
T ss_pred --------------CCc--cc-----CCCcEEEEeCccccccCCCCCCCCeEEEEEcHHH--HHhCC--CCeeeccCCee
Confidence 000 00 026999999999999997 68999998752 22121 1111100000
Q ss_pred ------cccccccccCCCCChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccc
Q psy852 407 ------AIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEIS 465 (891)
Q Consensus 407 ------~~~~~~~~~~~sr~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv 465 (891)
....+.....+......++.|..++.+|.+++.++.++..++++++.+.|++. ++++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~ 368 (474)
T 1wyu_B 305 YLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVP 368 (474)
T ss_dssp EEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCS
T ss_pred EecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEec
Confidence 00000001011112346678999999999999999999999999999999886 77764
No 22
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.75 E-value=3.7e-17 Score=187.02 Aligned_cols=256 Identities=12% Similarity=0.101 Sum_probs=178.6
Q ss_pred CCCCcc-hhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC---CCCCCcCH
Q psy852 468 VRSSAS-ECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP---DDKNSLRG 543 (891)
Q Consensus 468 itsggs-ean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~---d~~G~mD~ 543 (891)
+++|+| .++..+|.++|.... +.+.|+++..+|.|+.||+.++|+..+.|++ ++.+.||+
T Consensus 121 lV~GaT~~~~a~~L~aar~~~~----------------~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~ 184 (450)
T 3bc8_A 121 VVPMATGMSLTLCFLTLRHKRP----------------KAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDL 184 (450)
T ss_dssp EESSCHHHHHHHHHHHHHHHCT----------------TCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCH
T ss_pred EECCHHHHHHHHHHHHcchhhc----------------CCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCH
Confidence 456776 788888999988421 0134666677999999999999987776654 77899999
Q ss_pred HHHHHHHHhhhhcCCccEEEEecCCccc-------------hhh-----hhc----------------CC--CCccEEEE
Q psy852 544 ATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYR-----KSQ----------------GI--EYADSFNV 587 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~-----~ld----------------Gi--~~aDSIs~ 587 (891)
++|+++|+++.. ..+++|+++.+++. |++ |+| ++ ++||+++.
T Consensus 185 ~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~ 262 (450)
T 3bc8_A 185 KAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQ 262 (450)
T ss_dssp HHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEE
Confidence 999999998742 24677777766663 333 233 23 68999999
Q ss_pred cCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHH
Q psy852 588 NVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHC 667 (891)
Q Consensus 588 d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~ 667 (891)
|+|||+++|++++++++|+++.+..... .|... +. ...+|++|.+++.+|.++|++.+++++
T Consensus 263 S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~g~-------------~s--~SpsL~l~~~l~~~G~~g~~~~i~~~~ 324 (450)
T 3bc8_A 263 SLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPGR-------------AS--ASPSLDVLITLLSLGCSGYRKLLKERK 324 (450)
T ss_dssp EHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCSC-------------BC--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCchhccEEEEecCHHHHHHHHH---HhhcC-------------Cc--ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998766644321 23210 00 123599999999999999999999999
Q ss_pred HHHHHHHHHhccCC---CcEEeCCCcee-EEEEEecCCcchhhhhhHHHHHHHHHhC---CcEEEe--------------
Q psy852 668 ELAKLFEGKVRRDP---RFEISNDVRLG-LVCFRLRSENNLIADQNNRKLLEDINAS---GRLHMV-------------- 726 (891)
Q Consensus 668 ~lA~~L~~~L~~~~---~~eil~~~~~~-iV~Fr~~~~~~~~~d~ln~~L~~~L~~~---G~~~~s-------------- 726 (891)
+++++|.++|++++ ++.++..+..+ -.++.+..... ..+.+..+|.-.+... |.-+..
T Consensus 325 ~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~-~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~ 403 (450)
T 3bc8_A 325 EMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDG-HHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRG 403 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSS-SSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEET
T ss_pred HHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccc-cccCCCceeEEEecCCCCccceeeecccccchhHHHHHH
Confidence 99999999999988 88888755332 12232321100 0022344566666443 433220
Q ss_pred -e--ccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 727 -P--ASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 727 -~--s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+ ...-..+.+ +.++...+++|+++++++|+++..
T Consensus 404 ~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~ 441 (450)
T 3bc8_A 404 FMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLN 441 (450)
T ss_dssp TTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 0 111233445 777888999999999999999864
No 23
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.75 E-value=4.1e-17 Score=187.52 Aligned_cols=263 Identities=11% Similarity=0.138 Sum_probs=184.3
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcc-hhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSAS-ECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggs-ean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
++.+.+++.+...+. ++ +++|+| .+|+.++.++|... +...|+++..+|+|+.+++..
T Consensus 137 ~~~~~la~~~g~~~~--~~--~t~g~te~a~~~al~~~~~~~-----------------~~~~vi~~~~~h~s~~~~~~~ 195 (456)
T 2z67_A 137 KILESFFKQLGLNVH--AI--ATPISTGMSISLCLSAARKKY-----------------GSNVVIYPYASHKSPIKAVSF 195 (456)
T ss_dssp HHHHHHHHHTTCCCE--EE--EESSCHHHHHHHHHHHHHHHH-----------------CCCEEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC--EE--EeCcHHHHHHHHHHHHHHHhc-----------------CCCEEEEECCCcHHHHHHHHH
Confidence 344566677765443 44 788999 46777888776521 122466666799999999999
Q ss_pred cCceEEEecC---CCCCCcCHHHHHHHHHhhhhcCCccEEEEecCC-----ccc--------hhh-----hhc---C---
Q psy852 526 AFVRLKILEP---DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLG-----TTS--------CYR-----KSQ---G--- 578 (891)
Q Consensus 526 ~gv~v~~Vp~---d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataG-----TT~--------c~~-----~ld---G--- 578 (891)
.|++++.||. +++|.+|+++|+++|+.+...+ .+.+|+.+.+ +.. |++ ++| |
T Consensus 196 ~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~ 274 (456)
T 2z67_A 196 VGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQN 274 (456)
T ss_dssp TTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTC
T ss_pred cCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHH
Confidence 9999988886 7889999999999994321112 3555554444 333 433 344 2
Q ss_pred ----------CC-CccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccchH
Q psy852 579 ----------IE-YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLK 646 (891)
Q Consensus 579 ----------i~-~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~ 646 (891)
+. ++|++++|+|||+++|.++|++++|+++.+... .+.|.. .+. ..++.
T Consensus 275 ~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l---~~~~~g----------------~~~~~~~~~ 335 (456)
T 2z67_A 275 NYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEI---SLSYPG----------------RASATPVVN 335 (456)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HTTSCS----------------CBCSHHHHH
T ss_pred HHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhc---CcCCCC----------------CCCCCHHHH
Confidence 01 699999999999999999999999876544322 223321 111 12788
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcE
Q psy852 647 LWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRL 723 (891)
Q Consensus 647 lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~ 723 (891)
+|+++..+|.++++++.++..+++++|.+.|++.+ ++.++.+ . ++|+|++... + ....+.++|.++|+.
T Consensus 336 ~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~-~-~~v~~~~~~~-----~-~~~~l~~~L~~~gi~ 407 (456)
T 2z67_A 336 TLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDV-E-SPIASCISVN-----S-DPVEIAAKLYNLRVT 407 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCC-C-CSSEEEEECS-----S-CHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCC-C-CeEEEEEecc-----c-HHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999885 7666654 4 8899988321 1 145678888888752
Q ss_pred --EEe-------ecc--ccCCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 724 --HMV-------PAS--QEQNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 724 --~~s-------~s~--~~g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
-+. +.. ......+ ++++.++|++|||+++++|+++
T Consensus 408 ~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 408 GPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp SCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred cceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHH
Confidence 121 110 1122456 8898899999999999999864
No 24
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.74 E-value=1.2e-15 Score=170.46 Aligned_cols=168 Identities=15% Similarity=0.119 Sum_probs=120.1
Q ss_pred CCCCccccccCCCCCCH-HHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCc
Q psy852 14 HWQHPRFHAYFPSGNSY-PSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDI 92 (891)
Q Consensus 14 ~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~ 92 (891)
.-.+|.++-+.|.+... +.++..+..... ...+|....+..++.+++++++|.+.... +
T Consensus 8 ~~~~~~~~~~~pgp~~~~~~v~~a~~~~~~------~~~~~~~~~~~~~~~~~la~~~~~~~~~~--------v------ 67 (411)
T 3nnk_A 8 QLNPPSRLLMGPGPINADPRVLRAMSSQLI------GQYDPAMTHYMNEVMALYRGVFRTENRWT--------M------ 67 (411)
T ss_dssp SCCCCCCEEESSSCCCCCHHHHHHHTSCCC------CTTCHHHHHHHHHHHHHHHHHHTCCCSEE--------E------
T ss_pred ccCCccceeecCCCCCCCHHHHHHhhcccc------ccccHHHHHHHHHHHHHHHHHhCCCCCcE--------E------
Confidence 34577777777665544 444443332221 12367777888999999999999875420 0
Q ss_pred cccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChH--HHHHHHHcCCeEEEEe
Q psy852 93 DMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAAMMAFVRLKILE 170 (891)
Q Consensus 93 ~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~S--v~kaa~~~~~~v~~V~ 170 (891)
.+++||+......+..+ .. ++..|+++..+|++ +..++...+.+++.|+
T Consensus 68 --------------~~~~sgt~al~~~~~~~--~~-------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 118 (411)
T 3nnk_A 68 --------------LVDGTSRAGIEAILVSA--IR-------------PGDKVLVPVFGRFGHLLCEIARRCRAEVHTIE 118 (411)
T ss_dssp --------------EEESCHHHHHHHHHHHH--CC-------------TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEE
T ss_pred --------------EECCCcHHHHHHHHHHh--cC-------------CCCEEEEecCCchHHHHHHHHHHcCCeEEEEe
Confidence 13456664333322222 11 12247788889988 6777777788999999
Q ss_pred cCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeecccc
Q psy852 171 PDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 171 ~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
++.++.+|+++|++++++.. +.+|+++..+|.+|.+.|+++|+++|+++|+++|+|+|++
T Consensus 119 ~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~ 178 (411)
T 3nnk_A 119 VPWGEVFTPDQVEDAVKRIR-----PRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATAS 178 (411)
T ss_dssp CCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTT
T ss_pred cCCCCCCCHHHHHHHHhhCC-----CeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcc
Confidence 99999999999999998632 4588889999999999999999999999999999998873
No 25
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.73 E-value=1e-15 Score=169.11 Aligned_cols=279 Identities=14% Similarity=0.111 Sum_probs=204.6
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccc-cccceEEEecccchHHHHHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGV-LLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~-~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
++.+.+++.+...+. +++ +++|+++++..++.+++..+..+... |. ..+...|+++..+|+++.+++..
T Consensus 73 ~l~~~la~~~~~~~~-~i~--~~~ggt~a~~~~~~~~~~~~~~~~~~-------~~~~~~gd~vl~~~~~~~~~~~~~~~ 142 (397)
T 3f9t_A 73 KAVALLGSLLNNKDA-YGH--IVSGGTEANLMALRCIKNIWREKRRK-------GLSKNEHPKIIVPITAHFSFEKGREM 142 (397)
T ss_dssp HHHHHHHHHTTCTTC-EEE--EESCHHHHHHHHHHHHHHHHHHHHHT-------TCCCCSSCEEEEETTCCTHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC-CEE--EecCcHHHHHHHHHHHHHHHHhhhhh-------cccCCCCeEEEECCcchhHHHHHHHH
Confidence 455566666654333 555 78899999999999998765443321 11 22456799999999999999998
Q ss_pred cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCCC---------
Q psy852 526 AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGIE--------- 580 (891)
Q Consensus 526 ~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi~--------- 580 (891)
.|.+++.||.++++.+|+++|+++|++. ....++++. ..|+.. |.++ +|++.
T Consensus 143 ~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~ 219 (397)
T 3f9t_A 143 MDLEYIYAPIKEDYTIDEKFVKDAVEDY---DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLD 219 (397)
T ss_dssp HTCEEEEECBCTTSSBCHHHHHHHHHHS---CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCC
T ss_pred cCceeEEEeeCCCCcCCHHHHHHHHhhc---CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcc
Confidence 8999999999999999999999999872 111222222 234433 4431 22211
Q ss_pred ----------------CccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-cc
Q psy852 581 ----------------YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FR 643 (891)
Q Consensus 581 ----------------~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~ 643 (891)
.+|++++++|||+++|.++|+++++++... +.+.....|+.... .....+++. ..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 291 (397)
T 3f9t_A 220 DKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR-------QATILGTRVGFG 291 (397)
T ss_dssp GGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE-------ECSSCSSCCSHH
T ss_pred cccccccccccccccccCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC-------ccccccccccch
Confidence 589999999999999999999999887544 22322234443221 122334553 45
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcE
Q psy852 644 SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRL 723 (891)
Q Consensus 644 aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~ 723 (891)
.+.+|++++.++..++.+.+++..++++++.+.|++. +++++.++..++++|++.+ ...+.+.|.++|+.
T Consensus 292 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~gi~ 361 (397)
T 3f9t_A 292 GACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDED---------YKEVCKKLRDRGIY 361 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTT---------HHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCC---------HHHHHHHHHhCCeE
Confidence 6889999999999999999999999999999999998 8888888888999998752 46788889999987
Q ss_pred EEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 724 HMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 724 ~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+..+. ....+ ++++..+|++|++++++.|++++
T Consensus 362 v~~~~---~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 362 VSVCN---CVKALRIVVMPHIKREHIDNFIEILNSIK 395 (397)
T ss_dssp CEECS---SSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred EeccC---CCCEEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 43322 13566 99999999999999999998764
No 26
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.71 E-value=1.4e-14 Score=160.05 Aligned_cols=164 Identities=15% Similarity=0.064 Sum_probs=118.7
Q ss_pred ccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCC-CCCCCCCCCCCCCCCCCCccccc
Q psy852 18 PRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLP-EKFLMYPPQGKNATTPNDIDMNI 96 (891)
Q Consensus 18 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~-~~~~~~~~~~~g~~tp~~~~~~~ 96 (891)
..|+++..++...+.+...+.....+ ..++...++..++.+++++++|.+ ... .
T Consensus 20 ~~~l~~~~~~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~~~~~la~~~g~~~~~~--------v----------- 74 (386)
T 2dr1_A 20 KYKLFTAGPVACFPEVLEIMKVQMFS------HRSKEYRKVHMDTVERLREFLEVEKGEV--------L----------- 74 (386)
T ss_dssp CSEECCSSSCCCCHHHHHHTTSCCCC------TTSHHHHHHHHHHHHHHHHHHTCSSSEE--------E-----------
T ss_pred cceeecCCCcCCcHHHHHHHhccccc------ccCHHHHHHHHHHHHHHHHHhCCCCCcE--------E-----------
Confidence 46888876666667665544322211 235666889999999999999997 211 0
Q ss_pred cccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChH--HHHHHHHcCCeEEEEecCCC
Q psy852 97 EDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAAMMAFVRLKILEPDDK 174 (891)
Q Consensus 97 ~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~S--v~kaa~~~~~~v~~V~~d~~ 174 (891)
.+++||+......+..+. + ++..|+++..+|++ +..++...|.+++.++++.+
T Consensus 75 ----------~~~~g~t~a~~~~~~~l~--~-------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 129 (386)
T 2dr1_A 75 ----------LVPSSGTGIMEASIRNGV--S-------------KGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEYEPG 129 (386)
T ss_dssp ----------EESSCHHHHHHHHHHHHS--C-------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT
T ss_pred ----------EEeCChHHHHHHHHHHhh--c-------------CCCeEEEEcCCchhHHHHHHHHHhCCceEEEecCCC
Confidence 135677644333222221 1 12247777888988 67777777889999999999
Q ss_pred CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeecccc
Q psy852 175 NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 175 g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
+.+|+++|++++++.. .+.+|+++..+|.+|.+.|+++|+++|+++|+++++|.|++
T Consensus 130 ~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~ 186 (386)
T 2dr1_A 130 KAVKPEDLDDALRKNP----DVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSA 186 (386)
T ss_dssp CCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTT
T ss_pred CCCCHHHHHHHHhcCC----CCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEcccc
Confidence 9999999999996521 24578888999999999999999999999999999999884
No 27
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.70 E-value=3.7e-15 Score=163.05 Aligned_cols=107 Identities=6% Similarity=-0.053 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC----ceeEEEEEecCCcchhhhhhHHHHHHHHHhC
Q psy852 645 LKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV----RLGLVCFRLRSENNLIADQNNRKLLEDINAS 720 (891)
Q Consensus 645 L~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~----~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~ 720 (891)
+.++.+++.+...|+.++.++..++++++.+.|+++|+++++.+. ...+++|.+.+ ...++.+.|.++
T Consensus 250 ~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~ 321 (362)
T 3ffr_A 250 FLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM--------LPGEINKILEPF 321 (362)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--------CHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--------CHHHHHHHHHHC
Confidence 345566666667788999999999999999999999999987622 24688888853 456888999989
Q ss_pred CcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 721 GRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 721 G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
|+.+..+....+...+ ++++..++++||++++++|+++.
T Consensus 322 gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 322 DMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp TEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 9887665555555667 99999999999999999998753
No 28
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.68 E-value=7.6e-16 Score=179.84 Aligned_cols=172 Identities=22% Similarity=0.314 Sum_probs=136.7
Q ss_pred HHHHHHHHHhhccCC-ccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCcccccccc-ccceEEEecccchHHHHHHH
Q psy852 446 CELAKLFEGKVRRDP-RFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVL-LSKLMAYCSKEAHSCVEKAA 523 (891)
Q Consensus 446 lelAr~l~~~L~~~~-~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~-~~~~vI~~S~~aH~Sv~Kaa 523 (891)
.++++++++.+.... .-.++ +++|||++|+.++.++|.++.++.+ +.|+. .++.+||+|..+|+|+.+++
T Consensus 138 ~~~~~~l~~~~g~~~~~~~~~--~t~ggt~a~~~al~~a~~~~~~~~~------~~G~~~~~~~~v~~s~~~H~s~~~~~ 209 (511)
T 3vp6_A 138 QITLKKMREIVGWSSKDGDGI--FSPGGAISNMYSIMAARYKYFPEVK------TKGMAAVPKLVLFTSEQSHYSIKKAG 209 (511)
T ss_dssp HHHHHHHHHHHTCCSSSCEEE--EESSHHHHHHHHHHHHHHHHCTHHH------HHCGGGSCCEEEEEETTSCTHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCceE--ECCchHHHHHHHHHHHHHHhhhhhh------hcCcccCCCeEEEECCCchHHHHHHH
Confidence 344556666665432 12344 7899999999999999987643221 12322 25778999999999999999
Q ss_pred HHcCc---eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhh-------------
Q psy852 524 MMAFV---RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYR------------- 574 (891)
Q Consensus 524 ~l~gv---~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~------------- 574 (891)
.+.|. +++.||+|++|+||+++|+++|+++.+.|..|.+|+++.|+|. |++
T Consensus 210 ~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~ 289 (511)
T 3vp6_A 210 AALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGG 289 (511)
T ss_dssp HHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGG
T ss_pred HHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchh
Confidence 98776 8999999999999999999999998888888999999998876 332
Q ss_pred ----------hhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCC
Q psy852 575 ----------KSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGH 625 (891)
Q Consensus 575 ----------~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~ 625 (891)
.+.|++++||+++|+|||+++|++||++++|++..+...+...+.|+....
T Consensus 290 ~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~ 350 (511)
T 3vp6_A 290 GLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQD 350 (511)
T ss_dssp GGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSS
T ss_pred hHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcc
Confidence 134677899999999999999999999999999877777777888887543
No 29
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.67 E-value=3.5e-14 Score=156.59 Aligned_cols=137 Identities=16% Similarity=0.129 Sum_probs=101.0
Q ss_pred cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc
Q psy852 51 ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI 130 (891)
Q Consensus 51 ~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~ 130 (891)
.++....+..++.+++++++|.+.... +. .+++||+.... .+..+ .
T Consensus 29 ~~~~~~~~~~~~~~~la~~~~~~~~~~------~v---------------------~~~~g~t~al~-~~~~~---~--- 74 (384)
T 3zrp_A 29 TSKEFVEALAYSLKGLRYVMGASKNYQ------PL---------------------IIPGGGTSAME-SVTSL---L--- 74 (384)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCTTSE------EE---------------------EEESCHHHHHH-HGGGG---C---
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCCc------EE---------------------EEcCCcHHHHH-HHHhh---c---
Confidence 356678888999999999999875210 00 13567764322 11111 0
Q ss_pred CCccccccccCCeEEEecCCCChH--HHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc
Q psy852 131 HPFVDEGVLLSKLMAYCSKEAHSC--VEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC 208 (891)
Q Consensus 131 ~~~~~~g~~~~~~~v~~S~~~H~S--v~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~ 208 (891)
.++..|+++..+|++ +...+...|.+++.|+++.++.+|+++|++.+++.. +.+|+++..+|.+
T Consensus 75 ---------~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~npt 140 (384)
T 3zrp_A 75 ---------KPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSE-----YKLVALTHVETST 140 (384)
T ss_dssp ---------CTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSC-----EEEEEEESEETTT
T ss_pred ---------CCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCC-----CcEEEEeCCCCCC
Confidence 122347777788877 334445567899999999999999999999998732 4688888999999
Q ss_pred ccccCHHHHHHHHHHcCCceeeecccc
Q psy852 209 CSFDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 209 GavDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
|.+.|+++|.++|+++|+++++|+|++
T Consensus 141 G~~~~l~~i~~l~~~~~~~li~D~a~~ 167 (384)
T 3zrp_A 141 GVREPVKDVINKIRKYVELIVVDGVSS 167 (384)
T ss_dssp TEECCHHHHHHHHGGGEEEEEEECTTT
T ss_pred ceECcHHHHHHHHHhcCCEEEEECccc
Confidence 999999999999999988888888873
No 30
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.67 E-value=4.4e-14 Score=157.92 Aligned_cols=171 Identities=11% Similarity=0.028 Sum_probs=115.9
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCCCC----CccccChhHHHHHHHHHHHHHHHcCCC-CCCCCCCCCCCCCCCCCCcc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIGCIG----FSWAASPSCTELETIVLDWLGKAIGLP-EKFLMYPPQGKNATTPNDID 93 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~----~~~~~~p~~~~~E~~~~~~l~~l~g~~-~~~~~~~~~~~g~~tp~~~~ 93 (891)
.|+++-..+...+.++..+...+-+... ..+..++.......++.+.+++++|.+ ....
T Consensus 30 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v---------------- 93 (420)
T 1t3i_A 30 VYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREI---------------- 93 (420)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGE----------------
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeE----------------
Confidence 4676665555556666655554432111 122334444566777889999999983 2210
Q ss_pred ccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHH----HHHHHHcCCeEEEE
Q psy852 94 MNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCV----EKAAMMAFVRLKIL 169 (891)
Q Consensus 94 ~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv----~kaa~~~~~~v~~V 169 (891)
.+++||+.... ..+...+... .. +...|+++..+|++. ...+...|.+++.|
T Consensus 94 -------------~~~~g~t~a~~-~~~~~~~~~~-~~---------~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v 149 (420)
T 1t3i_A 94 -------------VYTRNATEAIN-LVAYSWGMNN-LK---------AGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV 149 (420)
T ss_dssp -------------EEESSHHHHHH-HHHHHTHHHH-CC---------TTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEE
T ss_pred -------------EEcCChHHHHH-HHHHHhhhcc-cC---------CCCEEEECcchhHHHHHHHHHHHHhcCcEEEEe
Confidence 13567764433 2332222100 01 123477888899884 44555567799999
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeecccc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
++++++.+|+++|++++++. +.+|+++..+|.+|.+.|+++|.++|+++|+++++|+|++
T Consensus 150 ~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~ 209 (420)
T 1t3i_A 150 QLDEQESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQS 209 (420)
T ss_dssp CBCTTSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccCCCCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhc
Confidence 99999999999999988653 4588889999999999999999999999999999999884
No 31
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.65 E-value=4.3e-15 Score=166.16 Aligned_cols=288 Identities=12% Similarity=0.038 Sum_probs=185.6
Q ss_pred cCCCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCC
Q psy852 11 QVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPN 90 (891)
Q Consensus 11 ~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~ 90 (891)
+.....+|+++.+.+++...+..+.+.+. +.. ....++...++...+.+++++++|.+.... +
T Consensus 3 ~~~~~~~~~~~~~~p~p~~~~~~v~~a~~---~~~--~~~~~~~~~~~~~~l~~~la~~~g~~~~~~--------~---- 65 (416)
T 3isl_A 3 GRRELCTPLRTIMTPGPVEVDPRVLRVMS---TPV--VGQFDPAFTGIMNETMEMLRELFQTKNRWA--------Y---- 65 (416)
T ss_dssp --CCCCCCCCEECSSSSCCCCHHHHHHTT---SCC--CCTTSHHHHHHHHHHHHHHHHHTTCCCSEE--------E----
T ss_pred CccccCcccceeecCCCcCcCHHHHHHhc---ccC--CCCccHHHHHHHHHHHHHHHHHhCCCCCcE--------E----
Confidence 33445567777777665544433333222 221 123446678889999999999999875421 0
Q ss_pred CccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChH--HHHHHHHcCCeEEE
Q psy852 91 DIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAAMMAFVRLKI 168 (891)
Q Consensus 91 ~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~S--v~kaa~~~~~~v~~ 168 (891)
.+++||+......+..+ .. +...|+++..+|++ +.+++...|.+++.
T Consensus 66 ----------------~~~~s~t~al~~~~~~l--~~-------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~ 114 (416)
T 3isl_A 66 ----------------PIDGTSRAGIEAVLASV--IE-------------PEDDVLIPIYGRFGYLLTEIAERYGANVHM 114 (416)
T ss_dssp ----------------EEESCHHHHHHHHHHHH--CC-------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEE
T ss_pred ----------------EecCcHHHHHHHHHHHh--cC-------------CCCEEEEecCCcccHHHHHHHHhcCCeeEE
Confidence 12456653322222222 11 12247777789998 66677777889999
Q ss_pred EecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccC
Q psy852 169 LEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFM 248 (891)
Q Consensus 169 V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~ 248 (891)
|+++.++.+|+++|++++++.. +.+|+++..+|.+|.+.|+++|+++|+++|+++++|++++.....
T Consensus 115 v~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~-------- 181 (416)
T 3isl_A 115 LECEWGTVFDPEDIIREIKKVK-----PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCE-------- 181 (416)
T ss_dssp EECCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSC--------
T ss_pred EecCCCCCCCHHHHHHHHhhCC-----CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCC--------
Confidence 9999999999999999998532 458899999999999999999999999999999999887311100
Q ss_pred CCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccc
Q psy852 249 NGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRD 328 (891)
Q Consensus 249 ~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (891)
T Consensus 182 -------------------------------------------------------------------------------- 181 (416)
T 3isl_A 182 -------------------------------------------------------------------------------- 181 (416)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccC------------
Q psy852 329 AIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD------------ 396 (891)
Q Consensus 329 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~------------ 396 (891)
... +. ..+|.++.++|||+++|.++|++++++... ..+...
T Consensus 182 --------------------~~~----~~-~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~--~~~~~~~~~~~Gw~~~~~ 234 (416)
T 3isl_A 182 --------------------VKV----DE-WKIDAAIGGTQKCLSVPSGMAPITYNERVA--DVIAARKKVERGIATQAD 234 (416)
T ss_dssp --------------------CCT----TT-TTCSEEECCSSSTTCCCSSEEEEEECHHHH--HHHHTC------------
T ss_pred --------------------cch----hh-cCCCEEEecCccccCCCCCeEEEEECHHHH--HHhhcccccccccccccc
Confidence 000 00 136999999999999999999999876421 111100
Q ss_pred ccccCCCCCC---cccc-------ccccc-CCCCCh-hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCcccc
Q psy852 397 PLYLQHGHEG---AIDY-------RHWGI-PLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEI 464 (891)
Q Consensus 397 ~~y~~~~~~~---~~~~-------~~~~~-~~sr~~-~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eV 464 (891)
.++...+... ..+. ....+ .++... ..++++.+++.+...|+.++.++..++++++.+.|.+. ++++
T Consensus 235 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 313 (416)
T 3isl_A 235 RAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRL 313 (416)
T ss_dssp ------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred chhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEe
Confidence 0011100000 0000 01111 223333 34567788888888889999999999999999999884 7777
Q ss_pred ccC
Q psy852 465 SND 467 (891)
Q Consensus 465 v~~ 467 (891)
+.+
T Consensus 314 ~~~ 316 (416)
T 3isl_A 314 FGD 316 (416)
T ss_dssp CSC
T ss_pred ccC
Confidence 754
No 32
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.64 E-value=1.6e-13 Score=152.38 Aligned_cols=171 Identities=15% Similarity=-0.002 Sum_probs=115.8
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCC----CCCccccChhHHHHHHHHHHHHHHHcCCC-CCCCCCCCCCCCCCCCCCcc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIGC----IGFSWAASPSCTELETIVLDWLGKAIGLP-EKFLMYPPQGKNATTPNDID 93 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~~E~~~~~~l~~l~g~~-~~~~~~~~~~~g~~tp~~~~ 93 (891)
.|+++-.++...+.++..+...+-+. ....+..+........++.+++++++|.+ ....
T Consensus 25 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v---------------- 88 (406)
T 1kmj_A 25 AYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEEL---------------- 88 (406)
T ss_dssp EECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGE----------------
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeE----------------
Confidence 57777766666677766555444322 11122222334566777889999999983 2211
Q ss_pred ccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHH----HHHcCCeEEEE
Q psy852 94 MNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA----AMMAFVRLKIL 169 (891)
Q Consensus 94 ~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~ka----a~~~~~~v~~V 169 (891)
.+++||+.... ..+...+... . .+...|+++..+|+++... +...|.+++.+
T Consensus 89 -------------~~~~g~t~a~~-~~~~~~~~~~--~--------~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 144 (406)
T 1kmj_A 89 -------------VFVRGTTEGIN-LVANSWGNSN--V--------RAGDNIIISQMEHHANIVPWQMLCARVGAELRVI 144 (406)
T ss_dssp -------------EEESSHHHHHH-HHHHHTHHHH--C--------CTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE
T ss_pred -------------EEeCChhHHHH-HHHHHhhhhc--C--------CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE
Confidence 13567764433 3332222100 0 0122477788888876433 34567799999
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeecccc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
++++++.+|+++|++++++. +.+|+++..+|.+|.+.|+++|+++|+++|+++++|+|++
T Consensus 145 ~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~ 204 (406)
T 1kmj_A 145 PLNPDGTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQA 204 (406)
T ss_dssp CBCTTSCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred ecCCCCCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhh
Confidence 99999999999999988653 4688889999999999999999999999999999999984
No 33
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.64 E-value=4.5e-16 Score=179.74 Aligned_cols=175 Identities=41% Similarity=0.720 Sum_probs=126.4
Q ss_pred HHHHHHHHhhccCCcc--------ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH
Q psy852 447 ELAKLFEGKVRRDPRF--------EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC 518 (891)
Q Consensus 447 elAr~l~~~L~~~~~~--------eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S 518 (891)
+.++++++.+...+.+ .++ +|+|||++|+.+++++|..+.++.+...+...+....++.+||+|..+|+|
T Consensus 117 ~~~~~la~l~g~~~~~~~~~~~~~~~v--~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s 194 (486)
T 1js3_A 117 VMMDWLGKMLQLPEAFLAGEAGEGGGV--IQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSS 194 (486)
T ss_dssp HHHHHHHHHTTCCGGGCCTTTCSCEEE--EESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHH
T ss_pred HHHHHHHHHhCCCchhcccCCCCCCeE--EcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHH
Confidence 3455666666543211 233 789999999999999998765432110000000001236689999999999
Q ss_pred HHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhh-----h-----
Q psy852 519 VEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYR-----K----- 575 (891)
Q Consensus 519 v~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~-----~----- 575 (891)
+.+++.+.|++++.||+|++|+||+++|+++|+++++.|..|++|+.+.|+|. |++ |
T Consensus 195 ~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~ 274 (486)
T 1js3_A 195 VERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAY 274 (486)
T ss_dssp HHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhh
Confidence 99999999999999999999999999999999999888888999999888765 332 1
Q ss_pred -------------hcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCcccc
Q psy852 576 -------------SQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQH 623 (891)
Q Consensus 576 -------------ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~ 623 (891)
+.|++.+||+++|+|||+++|++||++++|++..+.+.+...+.|+..
T Consensus 275 g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~ 335 (486)
T 1js3_A 275 AGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKH 335 (486)
T ss_dssp GGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC--------
T ss_pred HHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCC
Confidence 234567999999999999999999999999986655555555667654
No 34
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.62 E-value=5.3e-14 Score=155.18 Aligned_cols=275 Identities=13% Similarity=0.079 Sum_probs=183.5
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCC--CCC-ccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIGC--IGF-SWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMN 95 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n~--~~~-~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~ 95 (891)
.|+++-.++...+.++..+...+.+. |.. .+..++.......++.+++++++|.+....
T Consensus 2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v------------------ 63 (382)
T 4eb5_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTV------------------ 63 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEE------------------
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeE------------------
Confidence 37777777777888877776655432 111 244455667888899999999999864311
Q ss_pred ccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHH---cCCeEEEEecC
Q psy852 96 IEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM---AFVRLKILEPD 172 (891)
Q Consensus 96 ~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~---~~~~v~~V~~d 172 (891)
.+++||+....+.+..+.+.... +...|+++..+|+++..++.. .|.+++.|++|
T Consensus 64 -----------~~~~g~t~a~~~~~~~l~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 121 (382)
T 4eb5_A 64 -----------VFTSGATEANNLAIIGYAMRNAR-----------KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG 121 (382)
T ss_dssp -----------EEESSHHHHHHHHHHHHHHHHGG-----------GCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBC
T ss_pred -----------EEcCchHHHHHHHHHHHHhhccC-----------CCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccC
Confidence 13567765433333333211000 112488889999999888753 47799999999
Q ss_pred CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCc
Q psy852 173 DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKT 252 (891)
Q Consensus 173 ~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~ 252 (891)
++|.+|+++|++.+++. +.+|+++..+|.+|.+.|+++|.++|+++|++ ++|+|++. ..
T Consensus 122 ~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~-g~------------- 180 (382)
T 4eb5_A 122 KYGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASV-GQ------------- 180 (382)
T ss_dssp TTSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTB-TT-------------
T ss_pred CCCccCHHHHHHHhcCC------CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhc-CC-------------
Confidence 99999999999988653 45888999999999999999999999999988 88888841 00
Q ss_pred ccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccc
Q psy852 253 SFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFD 332 (891)
Q Consensus 253 ~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (891)
T Consensus 181 -------------------------------------------------------------------------------- 180 (382)
T 4eb5_A 181 -------------------------------------------------------------------------------- 180 (382)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCcccccc
Q psy852 333 VWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRH 412 (891)
Q Consensus 333 ~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 412 (891)
. ...+... .+|.++.++||+ ++|.+.|++++++...+. +.+...... .
T Consensus 181 -------------~-~~~~~~~-----~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~------~~~~~~~~~------~ 228 (382)
T 4eb5_A 181 -------------I-EVDVEKI-----GADMLTISSNDI-YGPKGVGALWIRKEAKLQ------PVILGGGQE------N 228 (382)
T ss_dssp -------------B-CCCHHHH-----TCSEEEEETGGG-TCCSSCEEEEEETTCCCC------CSSCSSCTG------G
T ss_pred -------------c-ccCcccc-----CCCEEEeehHHh-cCCCceEEEEEccccccC------ceecCCCcc------c
Confidence 0 0000000 258999999997 778889999998753121 111110000 0
Q ss_pred cccCCCCCh-hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 413 WGIPLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 413 ~~~~~sr~~-~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
....++-.. ...+++.+++.+. +++.++.++..++++++.+.|++.++++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 283 (382)
T 4eb5_A 229 GLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGH 283 (382)
T ss_dssp GTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSC
T ss_pred cccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCC
Confidence 001122222 2345556666543 47899999999999999999998888887643
No 35
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.62 E-value=6.8e-16 Score=174.31 Aligned_cols=164 Identities=12% Similarity=0.038 Sum_probs=103.0
Q ss_pred ccccccCCCCCCHHHHHHHHHHHhcC--CCCCc----cccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCC
Q psy852 18 PRFHAYFPSGNSYPSVLADMLSDAIG--CIGFS----WAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPND 91 (891)
Q Consensus 18 p~~~~~~~~~~~~~~~~~~~l~~~~n--~~~~~----~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~ 91 (891)
..|+.+.-+.+..+.++..|...+.+ .|+.+ ...++.+.++-.++.+.+++++|.++...
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~e-------------- 92 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYK-------------- 92 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEE--------------
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCce--------------
Confidence 45777777777888998888654422 22221 22466677888889999999999964310
Q ss_pred ccccccccCCCCCCCCc-ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEe
Q psy852 92 IDMNIEDYMTPANQPQS-LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILE 170 (891)
Q Consensus 92 ~~~~~~~~~t~~~~~~~-~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~ 170 (891)
+ .| |+|||.+.|+.+.++.+.. . .-+++.++..+|.++.. +...| ++..|+
T Consensus 93 v--------------if~t~~~T~a~n~ai~~l~~~g--d----------~v~~~~~~~~~~~~~~~-a~~~G-~v~~v~ 144 (386)
T 3qm2_A 93 V--------------LFCHGGGRGQFAGVPLNLLGDK--T----------TADYVDAGYWAASAIKE-AKKYC-APQIID 144 (386)
T ss_dssp E--------------EEEESCTTHHHHHHHHHHCTTC--C----------EEEEEESSHHHHHHHHH-HTTTS-EEEEEE
T ss_pred E--------------EEEcCCchHHHHHHHHhccCCC--C----------eEEEEeCCHHHHHHHHH-HHHhC-CeEEEe
Confidence 0 24 4789888777776653211 0 01123333334433322 22235 899999
Q ss_pred cC--CCCc-ccHHHHHHHHHhhhhcCCcceEEEeecccCccccc-cCHHHHHHHHHHcCCceeeeccc
Q psy852 171 PD--DKNS-LRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF-DNLAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 171 ~d--~~g~-id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav-Dpl~~I~~i~~~~~~~lHvDaA~ 234 (891)
+| ++|. +++++++.+++++ +.+|+++..+|.+|++ +||++|+ +|+++||||++
T Consensus 145 ~~~~~~G~~~~~~~~~~~l~~~------t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~q 201 (386)
T 3qm2_A 145 AKITVDGKRAVKPMREWQLSDN------AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSS 201 (386)
T ss_dssp CEEEETTEEEECCGGGCCCCTT------CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTT
T ss_pred cCcccCCCCCCchHHHhhcCCC------CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEccc
Confidence 99 7887 8999888777654 3478999999999995 9999996 78889999988
No 36
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.62 E-value=6.2e-14 Score=152.88 Aligned_cols=151 Identities=13% Similarity=0.009 Sum_probs=106.2
Q ss_pred CCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCC
Q psy852 26 SGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQ 105 (891)
Q Consensus 26 ~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~ 105 (891)
+.+..|.++..+.... . ...++.......++.+++++++|.+....
T Consensus 9 p~~~~~~v~~a~~~~~-~-----~~~~~~~~~~~~~l~~~la~~~g~~~~~i---------------------------- 54 (352)
T 1iug_A 9 PVRLHPKALEALARPQ-L-----HHRTEAAREVFLKARGLLREAFRTEGEVL---------------------------- 54 (352)
T ss_dssp SCCCCHHHHHHHHSCC-C-----CTTSHHHHHHHHHHHHHHHHHHTCSSEEE----------------------------
T ss_pred CCCCCHHHHHHhccCC-C-----CccCHHHHHHHHHHHHHHHHHhCCCCceE----------------------------
Confidence 3345566665554333 2 12456677788889999999999864211
Q ss_pred CCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHH--HHHHHcCCeEEEEecCCCCcccHHHHH
Q psy852 106 PQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVE--KAAMMAFVRLKILEPDDKNSLRGATLR 183 (891)
Q Consensus 106 ~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~--kaa~~~~~~v~~V~~d~~g~id~~~L~ 183 (891)
.+++||+......+..+ . . +...|+++..+|++.. +.+...|.+++.|+++++|.+|+++|+
T Consensus 55 -~~~~g~t~a~~~~~~~~-~-~-------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 118 (352)
T 1iug_A 55 -ILTGSGTLAMEALVKNL-F-A-------------PGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVA 118 (352)
T ss_dssp -EEESCHHHHHHHHHHHH-C-C-------------TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSC
T ss_pred -EEcCchHHHHHHHHHhc-c-C-------------CCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHh
Confidence 13567764433322222 1 1 1124778888999975 333346789999999999999999887
Q ss_pred HHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc--CCceeeecccc
Q psy852 184 QVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF--DVWLHVDGAYA 235 (891)
Q Consensus 184 ~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~--~~~lHvDaA~G 235 (891)
+ + .+.+|+++..+|.+|.+.|+++|.++|+++ |+++|+|+|++
T Consensus 119 ~---~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~ 163 (352)
T 1iug_A 119 K---E------GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTS 163 (352)
T ss_dssp C---S------SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTT
T ss_pred c---c------CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCcc
Confidence 6 1 245788899999999999999999999999 99999999883
No 37
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.62 E-value=7.4e-14 Score=156.84 Aligned_cols=278 Identities=15% Similarity=0.129 Sum_probs=187.6
Q ss_pred cccccCCCCCCHHHHHHHHHHHhc--CCCCC----ccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAI--GCIGF----SWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDI 92 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~--n~~~~----~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~ 92 (891)
.|+++..+++..|.++..+...+. +..+. .+..+....+...++.+++++++|.+....
T Consensus 24 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v--------------- 88 (423)
T 3lvm_A 24 IYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREI--------------- 88 (423)
T ss_dssp EECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGE---------------
T ss_pred EeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeE---------------
Confidence 588888777777887776665544 22221 333455667888889999999999864421
Q ss_pred cccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHH---HcCCeEEEE
Q psy852 93 DMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM---MAFVRLKIL 169 (891)
Q Consensus 93 ~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~---~~~~~v~~V 169 (891)
.+++||+....+.+..+.+.... +...|+++..+|++...++. ..+.+++.|
T Consensus 89 --------------~~~~ggt~a~~~a~~~l~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v 143 (423)
T 3lvm_A 89 --------------VFTSGATESDNLAIKGAANFYQK-----------KGKHIITSKTEHKAVLDTCRQLEREGFEVTYL 143 (423)
T ss_dssp --------------EEESSHHHHHHHHHHHHHHHHTT-----------TCCEEEEETTSCHHHHHHHHHHHHTTCEEEEE
T ss_pred --------------EEeCChHHHHHHHHHHHHHhhcc-----------CCCEEEECCccchHHHHHHHHHHHcCCEEEEe
Confidence 14567775444433334332110 12348888999999988874 347899999
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCC
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMN 249 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~ 249 (891)
+++++|.+|+++|++++++. +.+|+++..+|.+|.+.|+++|+++|+++|++|++|.|+++...-
T Consensus 144 ~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~--------- 208 (423)
T 3lvm_A 144 APQRNGIIDLKELEAAMRDD------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLP--------- 208 (423)
T ss_dssp CCCTTSCCCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---------
T ss_pred ccCCCCccCHHHHHHhcCCC------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------
Confidence 99999999999999998754 468889999999999999999999999999999999988542110
Q ss_pred CCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccccccccc
Q psy852 250 GKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDA 329 (891)
Q Consensus 250 g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (891)
T Consensus 209 -------------------------------------------------------------------------------- 208 (423)
T 3lvm_A 209 -------------------------------------------------------------------------------- 208 (423)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCccc
Q psy852 330 IFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAID 409 (891)
Q Consensus 330 ~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~ 409 (891)
... ... .+|.++.++|| .++|.+.|++++++..... + .+.+.......
T Consensus 209 -------------------~~~----~~~-~~di~~~s~sK-~~g~~g~G~~~~~~~~~~~--~--~~~~~~~~~~~--- 256 (423)
T 3lvm_A 209 -------------------IDL----SQL-KVDLMSFSGHK-IYGPKGIGALYVRRKPRVR--I--EAQMHGGGHER--- 256 (423)
T ss_dssp -------------------CCT----TTS-CCSEEEEESTT-TTSCSSCEEEEECBTTBCC--C--CCSSCSSCTTT---
T ss_pred -------------------cCh----hhc-CCCEEEechHH-hcCCCCeEEEEEeccccCC--C--CccccCCcccc---
Confidence 000 000 25899999999 6788889999998642111 1 11111111000
Q ss_pred ccccccCCCCCh-hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 410 YRHWGIPLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 410 ~~~~~~~~sr~~-~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
....++-.. ...++..+++.+... +.++.++..++++++.+.|.+.++++++.+
T Consensus 257 ---~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 311 (423)
T 3lvm_A 257 ---GMRSGTLPVHQIVGMGEAYRIAKEE-MATEMERLRGLRNRLWNGIKDIEEVYLNGD 311 (423)
T ss_dssp ---TTCCSCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTSTTEEEESC
T ss_pred ---cccCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 000112222 233445556554433 889999999999999999999889888754
No 38
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.60 E-value=9.9e-14 Score=154.03 Aligned_cols=280 Identities=17% Similarity=0.082 Sum_probs=182.3
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy852 16 QHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMN 95 (891)
Q Consensus 16 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~ 95 (891)
.++.|+++..+....+.++..+.....+ ..++........+.+++++++|.+....
T Consensus 7 ~~~~yl~~~~~~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~l~~~la~~~g~~~~~v------------------ 62 (392)
T 2z9v_A 7 ADPVITLTAGPVNAYPEVLRGLGRTVLY------DYDPAFQLLYEKVVDKAQKAMRLSNKPV------------------ 62 (392)
T ss_dssp SCCSEECSSSCCCCCHHHHHHTTSCCCC------TTSHHHHHHHHHHHHHHHHHTTCSSCCE------------------
T ss_pred CCcceeecCCCcCCCHHHHHHHhccccc------cccHHHHHHHHHHHHHHHHHhCCCCCEE------------------
Confidence 3567888877666777776655443322 1346667778889999999999863311
Q ss_pred ccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHH--HHHHHcCCeEEEEecCC
Q psy852 96 IEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVE--KAAMMAFVRLKILEPDD 173 (891)
Q Consensus 96 ~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~--kaa~~~~~~v~~V~~d~ 173 (891)
.+++||+......+..+ .. +...|+++..+|++.. ..+...|.+++.|++|+
T Consensus 63 -----------~~t~g~t~a~~~~~~~~--~~-------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 116 (392)
T 2z9v_A 63 -----------ILHGEPVLGLEAAAASL--IS-------------PDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY 116 (392)
T ss_dssp -----------EESSCTHHHHHHHHHHH--CC-------------TTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT
T ss_pred -----------EEeCCchHHHHHHHHHh--cC-------------CCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC
Confidence 13467764333222222 11 1123777788898873 22233577999999999
Q ss_pred CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcc
Q psy852 174 KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTS 253 (891)
Q Consensus 174 ~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~ 253 (891)
+|.+|+++|++++++. ..+.+|+++..+|.+|.+.|+++|.++|+++|+++++|+|++....
T Consensus 117 ~~~~d~~~l~~~l~~~----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-------------- 178 (392)
T 2z9v_A 117 NEAIDPQAVADMLKAH----PEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGM-------------- 178 (392)
T ss_dssp TSCCCHHHHHHHHHHC----TTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTB--------------
T ss_pred CCCCCHHHHHHHHhcC----CCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCc--------------
Confidence 9999999999999752 1245888899999999999999999999999999999998831100
Q ss_pred cccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccce
Q psy852 254 FDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDV 333 (891)
Q Consensus 254 ~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (891)
T Consensus 179 -------------------------------------------------------------------------------- 178 (392)
T 2z9v_A 179 -------------------------------------------------------------------------------- 178 (392)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhccc-C--c--cccCCCCC-Cc
Q psy852 334 WLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-D--P--LYLQHGHE-GA 407 (891)
Q Consensus 334 ~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~-~--~--~y~~~~~~-~~ 407 (891)
...+.. . .+|.++.++|||+++|.+.|++++++.. ...+.. . + .|...... ..
T Consensus 179 --------------~~~~~~----~-~~d~~~~s~sK~~~~~~g~G~l~~~~~~--~~~l~~~~~g~~~~~~~~~~~~~~ 237 (392)
T 2z9v_A 179 --------------KTHPED----C-KADIYVTGPNKCLGAPPGLTMMGVSERA--WAKMKANPLAPRASMLSIVDWENA 237 (392)
T ss_dssp --------------SCCGGG----G-TCSEEEECSSSTTCCCSCCEEEEECHHH--HHHHHTCTTSCCSSTTCSGGGTTT
T ss_pred --------------cccccc----c-cceEEEecCcccccCCCceeEEEECHHH--HHHhhhccCCCCceeccHHHHHhh
Confidence 000000 0 2589999999999999999999997642 111211 0 1 12110000 00
Q ss_pred ccccccccCCCCChh-HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCcccccc
Q psy852 408 IDYRHWGIPLSRRFR-SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 408 ~~~~~~~~~~sr~~~-~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~ 466 (891)
+.. .....++.... .++++.+++.+...|+.++.++..++++++.+.|++. +++++.
T Consensus 238 ~~~-~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 295 (392)
T 2z9v_A 238 WSR-DKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWA 295 (392)
T ss_dssp TST-TSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSS
T ss_pred hcc-cCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeecc
Confidence 000 00112233332 3456778887777779999999999999999999876 777664
No 39
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.60 E-value=5.5e-15 Score=171.66 Aligned_cols=169 Identities=22% Similarity=0.313 Sum_probs=129.6
Q ss_pred HHHHHHHHhhccCC-ccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCcccccccc-ccceEEEecccchHHHHHHHH
Q psy852 447 ELAKLFEGKVRRDP-RFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVL-LSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~-~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~-~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
++.+++++.+.... .-.++ +++|||++|+.++.++|.+..+..+ +.|.. .++++|++|..+|+|+.+++.
T Consensus 136 ~~~~~la~~~g~~~~~~~~~--~t~ggtea~~~al~~~~~~~~~~~~------~~G~~~~~~~~v~~s~~~h~s~~~~~~ 207 (504)
T 2okj_A 136 ITLKKMREIVGWSSKDGDGI--FSPGGAISNMYSIMAARYKYFPEVK------TKGMAAVPKLVLFTSEQSHYSIKKAGA 207 (504)
T ss_dssp HHHHHHHHHHTCCSSSCEEE--EESSHHHHHHHHHHHHHHHHCTTHH------HHCGGGSCCEEEEEETTSCTHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCEE--EeCCcHHHHHHHHHHHHHHHhhHHh------hcCccccCCeEEEECCcchHHHHHHHH
Confidence 34456666665421 22455 7899999999999999986532211 01211 135689999999999999998
Q ss_pred HcCc---eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhh--------------
Q psy852 525 MAFV---RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYR-------------- 574 (891)
Q Consensus 525 l~gv---~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~-------------- 574 (891)
+.+. +++.||+|++|+||+++|+++|+++.++|..|.+|+.+.|++. |++
T Consensus 208 ~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~ 287 (504)
T 2okj_A 208 ALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGG 287 (504)
T ss_dssp HTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGG
T ss_pred HcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhH
Confidence 7665 8999999999999999999999988877878999999988775 322
Q ss_pred ---------hhcCCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCcccc
Q psy852 575 ---------KSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQH 623 (891)
Q Consensus 575 ---------~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~ 623 (891)
.++|++++||+++|+|||+++|++||++++|++..+...+...+.|+.+
T Consensus 288 ~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~ 345 (504)
T 2okj_A 288 LLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQ 345 (504)
T ss_dssp GGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCC
T ss_pred HHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccC
Confidence 1356678999999999999999999999999986665555566777754
No 40
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.59 E-value=8.3e-14 Score=155.06 Aligned_cols=175 Identities=14% Similarity=0.090 Sum_probs=124.2
Q ss_pred CCCccccccCCCCCCHHHHHHHHHHHhc---CCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCC
Q psy852 15 WQHPRFHAYFPSGNSYPSVLADMLSDAI---GCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPND 91 (891)
Q Consensus 15 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~---n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~ 91 (891)
..+..|+++..+++..|.++..+...+. .+....+..++...++..++.+++++++|.+.+..
T Consensus 18 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v-------------- 83 (400)
T 3vax_A 18 GSHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDEL-------------- 83 (400)
T ss_dssp ----CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGE--------------
T ss_pred cCCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcE--------------
Confidence 4456789988777777777766655542 22222344455667888889999999999874321
Q ss_pred ccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCe-EEEecCCCChHHHHHHHH---cCCeEE
Q psy852 92 IDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKL-MAYCSKEAHSCVEKAAMM---AFVRLK 167 (891)
Q Consensus 92 ~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~-~v~~S~~~H~Sv~kaa~~---~~~~v~ 167 (891)
.+++||+....+.+..+.+.... +.. .|+++..+|+++..++.. .|.+++
T Consensus 84 ---------------~~~~g~t~al~~~~~~l~~~~~~-----------~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~ 137 (400)
T 3vax_A 84 ---------------IFTSGATESNNIALLGLAPYGER-----------TGRRHIITSAIEHKAVLEPLEHLAGRGFEVD 137 (400)
T ss_dssp ---------------EEESCHHHHHHHHHHTTHHHHHH-----------HTCCEEEEETTSCHHHHHHHHHHHTTTCEEE
T ss_pred ---------------EEeCCHHHHHHHHHHHHHHhhcc-----------CCCCEEEECccccHhHHHHHHHHHhcCCeEE
Confidence 13567764433322222211100 112 488889999999887743 477999
Q ss_pred EEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeecccc
Q psy852 168 ILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 168 ~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
.|++|++|.+|+++|++++++. +.+|+++..+|.+|.+.|+++|.++|+++|+++++|+|++
T Consensus 138 ~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~ 199 (400)
T 3vax_A 138 FLTPGPSGRISVEGVMERLRPD------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQG 199 (400)
T ss_dssp EECCCTTCCCCHHHHHTTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTT
T ss_pred EEccCCCCCcCHHHHHHhcCCC------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhh
Confidence 9999999999999999988654 4689999999999999999999999999998888888883
No 41
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.58 E-value=2.5e-14 Score=163.99 Aligned_cols=290 Identities=10% Similarity=0.044 Sum_probs=182.3
Q ss_pred cccccCCCCCCHHHH---HHHHHHHhcCCCCCccccC-hhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccc
Q psy852 19 RFHAYFPSGNSYPSV---LADMLSDAIGCIGFSWAAS-PSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDM 94 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~---~~~~l~~~~n~~~~~~~~~-p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~ 94 (891)
.|+++-..+...+.+ +.+.+....+.+...|..+ +....+...+.+++++++|.++...
T Consensus 69 iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v----------------- 131 (465)
T 3e9k_A 69 IYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEI----------------- 131 (465)
T ss_dssp EECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGE-----------------
T ss_pred EEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCE-----------------
Confidence 477776655544434 5555544334333334322 2334555667899999999875421
Q ss_pred cccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHH----HHHHcCCe-----
Q psy852 95 NIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK----AAMMAFVR----- 165 (891)
Q Consensus 95 ~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~k----aa~~~~~~----- 165 (891)
.+++|++. + +..+..+..+.. ..+..|+++..+|+|... .+...|.+
T Consensus 132 ------------~~t~g~t~-a-l~~~~~~~~~~~----------~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~ 187 (465)
T 3e9k_A 132 ------------ALMNALTV-N-LHLLMLSFFKPT----------PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESM 187 (465)
T ss_dssp ------------EECSCHHH-H-HHHHHHHHCCCC----------SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHE
T ss_pred ------------EEECCHHH-H-HHHHHHHhcccc----------CCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeee
Confidence 13456643 2 222222211110 123458889999988554 44445544
Q ss_pred EEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCC
Q psy852 166 LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFR 245 (891)
Q Consensus 166 v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~ 245 (891)
+..++.+.++.+|+++|+++|++.. ..+.+|+++..+|.+|.+.|+++|.++|+++|+++|+|+|++....-
T Consensus 188 v~~~~~~~~~~~d~~~l~~~i~~~~---~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~----- 259 (465)
T 3e9k_A 188 RMIKPREGEETLRIEDILEVIEKEG---DSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVE----- 259 (465)
T ss_dssp EEECCCTTCSSCCHHHHHHHHHHHG---GGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSC-----
T ss_pred EEEecCCCCCccCHHHHHHHHHhcC---CCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcC-----
Confidence 4456778889999999999997531 12568999999999999999999999999999999999888421110
Q ss_pred ccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccccc
Q psy852 246 PFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQS 325 (891)
Q Consensus 246 ~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (891)
T Consensus 260 -------------------------------------------------------------------------------- 259 (465)
T 3e9k_A 260 -------------------------------------------------------------------------------- 259 (465)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCC-ccCCceEEEEeccccchhhcc-cCccccCCC
Q psy852 326 YRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALV-VDPLYLQHG 403 (891)
Q Consensus 326 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~-~p~~~g~~~~r~~~~~~~~~~-~~~~y~~~~ 403 (891)
..+.. ..+|.++.++||++. +|.+.|+++++++.. ..+. ....|..+.
T Consensus 260 -----------------------~~~~~-----~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~--~~~~~~~~g~~~~~ 309 (465)
T 3e9k_A 260 -----------------------LYLHD-----WGVDFACWCSYKYLNAGAGGIAGAFIHEKHA--HTIKPALVGWFGHE 309 (465)
T ss_dssp -----------------------CCHHH-----HTCCEEEECSSSTTCCCTTCCCEEEECGGGT--TTSCCSSCCGGGBC
T ss_pred -----------------------Cchhh-----cCCCEEEECcccccccCCCceEEEEEcHHHH--hhcCCcccCccCCC
Confidence 00000 036999999999984 899899999976531 1111 011111110
Q ss_pred --------CCCcccccccccCCCCC--hhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccC----------Cccc
Q psy852 404 --------HEGAIDYRHWGIPLSRR--FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD----------PRFE 463 (891)
Q Consensus 404 --------~~~~~~~~~~~~~~sr~--~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~----------~~~e 463 (891)
....+......++.+.+ ...+++++++..+...|+.++.++..++++++.+.|.+. ++++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 389 (465)
T 3e9k_A 310 LSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVN 389 (465)
T ss_dssp HHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEE
T ss_pred CCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeE
Confidence 00011111122232222 346788999999988899999999999999999999875 7888
Q ss_pred cccC
Q psy852 464 ISND 467 (891)
Q Consensus 464 Vv~~ 467 (891)
++.+
T Consensus 390 ~~~p 393 (465)
T 3e9k_A 390 IITP 393 (465)
T ss_dssp ECSC
T ss_pred EeCC
Confidence 8764
No 42
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.58 E-value=1.7e-14 Score=157.02 Aligned_cols=250 Identities=14% Similarity=0.096 Sum_probs=166.4
Q ss_pred cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc
Q psy852 51 ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI 130 (891)
Q Consensus 51 ~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~ 130 (891)
.+|.....+.++.+++++++|.+.... +. .+++||+.........+ ..
T Consensus 27 ~~~~~~~~~~~l~~~la~~~g~~~~~~------~v---------------------~~t~g~t~a~~~~~~~~-~~---- 74 (353)
T 2yrr_A 27 LDPEVLRVNRAIQERLAALFDPGEGAL------VA---------------------ALAGSGSLGMEAGLANL-DR---- 74 (353)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCCCTTCE------EE---------------------EESSCHHHHHHHHHHTC-SC----
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCCCc------eE---------------------EEcCCcHHHHHHHHHHh-cC----
Confidence 467778889999999999999862100 01 13467764322222111 10
Q ss_pred CCccccccccCCeEEEecCCCChHH--HHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc
Q psy852 131 HPFVDEGVLLSKLMAYCSKEAHSCV--EKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC 208 (891)
Q Consensus 131 ~~~~~~g~~~~~~~v~~S~~~H~Sv--~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~ 208 (891)
..|+++..+|++. .+.+...|.+++.|++|++|.+|+++|++.+++. .+.+|+++..+|.+
T Consensus 75 ------------d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-----~~~~v~~~~~~npt 137 (353)
T 2yrr_A 75 ------------GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRR-----RYRMVALVHGETST 137 (353)
T ss_dssp ------------CCEEEEECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHS-----CCSEEEEESEETTT
T ss_pred ------------CcEEEEcCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhC-----CCCEEEEEccCCCc
Confidence 1267777788885 4444566789999999999999999999999862 14578889999999
Q ss_pred ccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhh
Q psy852 209 CSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISK 288 (891)
Q Consensus 209 GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 288 (891)
|.+.|+++|.++|+++|+++|+|+|++. ... |
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~a~~~-~~~--------------------------~--------------------- 169 (353)
T 2yrr_A 138 GVLNPAEAIGALAKEAGALFFLDAVTTL-GML--------------------------P--------------------- 169 (353)
T ss_dssp TEECCHHHHHHHHHHHTCEEEEECTTTT-TTS--------------------------C---------------------
T ss_pred ceecCHHHHHHHHHHcCCeEEEEcCccc-ccc--------------------------c---------------------
Confidence 9999999999999999999999999831 100 0
Q ss_pred hcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeC
Q psy852 289 LKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNV 368 (891)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~ 368 (891)
..+... .+|.+++++
T Consensus 170 ------------------------------------------------------------~~~~~~-----~~d~~~~s~ 184 (353)
T 2yrr_A 170 ------------------------------------------------------------FSMRAM-----GVDYAFTGS 184 (353)
T ss_dssp ------------------------------------------------------------CCHHHH-----TCSEEECCT
T ss_pred ------------------------------------------------------------cccccc-----CceEEEecC
Confidence 000000 248999999
Q ss_pred CCcCCccCCceEEEEeccccchhhcccCc-cccCCCCCCcccccccccCCCCCh-hHHHHHHHHHHhcHHHHHHHHHHHH
Q psy852 369 NKWLLTAFDSSCLWVADRYKLTSALVVDP-LYLQHGHEGAIDYRHWGIPLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHC 446 (891)
Q Consensus 369 HK~~~~p~~~g~~~~r~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~~~~~sr~~-~~l~~w~~l~~~g~~G~~~ii~~~l 446 (891)
|||+++|.++|++++++... ..+...+ .|+........ .......++... ...+++.+++.+...|+.++.++..
T Consensus 185 ~K~~~~~~g~G~~~~~~~~~--~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 261 (353)
T 2yrr_A 185 QKCLSAPPGLAPIAASLEAR--KAFTGKRGWYLDLARVAEH-WERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAR 261 (353)
T ss_dssp TSTTCCCSSCEEEEECHHHH--HHCCCCSCSTTCHHHHHHH-HTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cccccCCCceEEEEECHHHH--HHhccCCCccccHHHHhhh-hhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999986521 1121111 11110000000 000111233333 3355677888887788999999999
Q ss_pred HHHHHHHHhhccCCcccccc
Q psy852 447 ELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~ 466 (891)
++++++.+.|++. +++++.
T Consensus 262 ~~~~~l~~~L~~~-g~~~~~ 280 (353)
T 2yrr_A 262 EVYAWVLEELKAR-GFRPYP 280 (353)
T ss_dssp HHHHHHHHHHHHT-TCEESC
T ss_pred HHHHHHHHHHHHC-CCcccc
Confidence 9999999999886 777764
No 43
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.57 E-value=1.7e-13 Score=154.78 Aligned_cols=183 Identities=13% Similarity=0.090 Sum_probs=123.5
Q ss_pred CccccccCCCCCCHHHHHHHHHHHhcCC---CCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcc
Q psy852 17 HPRFHAYFPSGNSYPSVLADMLSDAIGC---IGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDID 93 (891)
Q Consensus 17 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~---~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~ 93 (891)
...|+++-.++...|.++..+....-+. ....|..++...++..++.+++++++|.+....
T Consensus 18 ~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v---------------- 81 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDI---------------- 81 (432)
T ss_dssp CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGE----------------
T ss_pred CcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeE----------------
Confidence 4568888766667777776666554321 122344455677888999999999999864321
Q ss_pred ccccccCCCCCCCCcccchhHHHHHHHHHHHHh------ccccCCccccccccCCeEEEecCCCChHHHHHHH-H---cC
Q psy852 94 MNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRG------QKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM-M---AF 163 (891)
Q Consensus 94 ~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~------~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~-~---~~ 163 (891)
.+++||+....+.+..+.+. ..+..=-+..........|++|..+|+|+.+++. + .|
T Consensus 82 -------------~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g 148 (432)
T 3a9z_A 82 -------------IFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQV 148 (432)
T ss_dssp -------------EEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTS
T ss_pred -------------EEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcC
Confidence 14567765444333333321 1110000000001122468899999999988763 2 57
Q ss_pred CeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcC----------Cceeeec
Q psy852 164 VRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFD----------VWLHVDG 232 (891)
Q Consensus 164 ~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~----------~~lHvDa 232 (891)
.+++.|++++ +|.+|+++|++++++. +.+|+++..+|.+|.+.|+++|.++|++++ +++|+|+
T Consensus 149 ~~v~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDe 222 (432)
T 3a9z_A 149 AEVTFVPVSKVNGQVEVEDILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDA 222 (432)
T ss_dssp CEEEEECCCTTTSSCCHHHHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEEC
T ss_pred cEEEEEecCcccCCcCHHHHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEc
Confidence 8999999986 8899999999988643 468899999999999999999999999997 7777777
Q ss_pred cc
Q psy852 233 AY 234 (891)
Q Consensus 233 A~ 234 (891)
||
T Consensus 223 a~ 224 (432)
T 3a9z_A 223 AQ 224 (432)
T ss_dssp TT
T ss_pred hh
Confidence 77
No 44
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.57 E-value=1.3e-14 Score=168.22 Aligned_cols=161 Identities=23% Similarity=0.327 Sum_probs=122.1
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccc--cceEEEecccchHHHHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLL--SKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~--~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
++.+++++.+...+.-.++ +++|||++|+.++.+||+++..+... ......|... ++++|++|..+|+|+.+++.
T Consensus 144 ~~~~~la~~~g~~~~~~~~--~t~ggt~a~~~al~~ar~~~~~~~~~-~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~ 220 (497)
T 2qma_A 144 KVVNWLCDKYDLSEKADGI--FTSGGTQSNQMGLMLARDWIADKLSG-HSIQKLGLPDYADKLRIVCSKKSHFTVQKSAS 220 (497)
T ss_dssp HHHHHHHHHTTCCTTCEEE--EESSHHHHHHHHHHHHHHHHHHHHHC-CCHHHHCSCGGGGGEEEEEETTSCTHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCeE--EcCCchHHHHHHHHHHHHHHHHhhcc-cchhhcccccccCCeEEEECCCchHHHHHHHH
Confidence 3455677777543323555 78999999999999999876532210 0000122211 46689999999999999998
Q ss_pred HcCc---eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhh-----h--------
Q psy852 525 MAFV---RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYR-----K-------- 575 (891)
Q Consensus 525 l~gv---~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~-----~-------- 575 (891)
+++. +++.||+|++++||+++|+++|+++.+.+..|++|+.+.|++. |.+ |
T Consensus 221 ~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~ 300 (497)
T 2qma_A 221 WMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGA 300 (497)
T ss_dssp HTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGG
T ss_pred HcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHH
Confidence 8755 7999999999999999999999988777777888888887765 332 1
Q ss_pred ---------hcCCCCccEEEEcCcccCCcccccEEEEEeCCccc
Q psy852 576 ---------SQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKL 610 (891)
Q Consensus 576 ---------ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L 610 (891)
++|++.+||+++|+|||+++|++||++++|++..+
T Consensus 301 ~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~ 344 (497)
T 2qma_A 301 LILSSHKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNF 344 (497)
T ss_dssp GGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGG
T ss_pred HHhCcchHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHH
Confidence 34566899999999999999999999999988644
No 45
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.56 E-value=1.1e-13 Score=159.74 Aligned_cols=285 Identities=15% Similarity=0.136 Sum_probs=183.8
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++++++++.+.. +. .++ +++||++++..++.++|....++ |-...+..|+++..+|.+..+++.+.
T Consensus 111 ~l~~~la~~~g~-~~-~~~--~~~ggt~a~~~al~~~~~~~~~~----------Gd~~~r~~Vlv~~~~h~~~~~~~~~~ 176 (474)
T 1wyu_B 111 ELGEYLKALTGM-DA-ITL--EPAAGAHGELTGILIIRAYHEDR----------GEGRTRRVVLVPDSAHGSNPATASMA 176 (474)
T ss_dssp HHHHHHHHHHTC-SE-EEC--CCSSHHHHHHHHHHHHHHHHHHT----------TCTTTCCEEEEETTSCTHHHHHHHHT
T ss_pred HHHHHHHHHHCC-Cc-eee--cChHHHHHHHHHHHHHHHHHHhc----------CCccCCCEEEEeCCcChhhHHHHHHC
Confidence 344455554432 22 233 67899999999999998754322 10013457888999999999999999
Q ss_pred CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe--cCCcc-c--------hhhh-----hcCC-----------
Q psy852 527 FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST--TLGTT-S--------CYRK-----SQGI----------- 579 (891)
Q Consensus 527 gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva--taGTT-~--------c~~~-----ldGi----------- 579 (891)
|++++.||++++|.+|+++|+++|+++++ .++++. ..|.. . |+++ +|++
T Consensus 177 G~~vv~v~~~~~~~~d~~~L~~~i~~~t~----~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~ 252 (474)
T 1wyu_B 177 GYQVREIPSGPEGEVDLEALKRELGPHVA----ALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARP 252 (474)
T ss_dssp TCEEEEECBCTTSSBCHHHHHHHCSTTEE----EEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH
T ss_pred CCEEEEecCCCCCCcCHHHHHHhhCCCce----EEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCc
Confidence 99999999999999999999999975421 222222 34554 2 3331 2221
Q ss_pred --CCccEEEEcCcccCCccc-----ccEEEEEeCCccchhhhccC------CCccccCCCCCccccCCcccccccccchH
Q psy852 580 --EYADSFNVNVNKWLLTAF-----DSSCLWVADRYKLTSALVVD------PLYLQHGHEGAIDYRHWGIPLSRRFRSLK 646 (891)
Q Consensus 580 --~~aDSIs~d~HK~L~~P~-----g~G~llvR~~~~L~~~l~~~------~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~ 646 (891)
.++|.+++|+||++++|+ ++|+++++++ +.+.+... ..|...-. ....++.....+.-.+...+
T Consensus 253 ~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~--l~~~l~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~a 329 (474)
T 1wyu_B 253 GDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH--LAPYLPVPLVERGEEGFYLDFD-RPKSIGRVRSFYGNFLALVR 329 (474)
T ss_dssp HHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG--GGGGCCSCEEEECSSCEEEECC-CTTCCCCSSSTTSCHHHHHH
T ss_pred ccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHH--HHHhCCCCeeeccCCeeEeccc-CcccCcccccCcCcHHHHHH
Confidence 147999999999999997 6999999875 22222100 01100000 00000000000111233567
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEE
Q psy852 647 LWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV-RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHM 725 (891)
Q Consensus 647 lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~ 725 (891)
.|..++.+|.+++++..++..+++++|.+.|++. ++++..+. ..+.+.+.+ +. +.....+.++|.++|+...
T Consensus 330 a~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~-----~~~~~~l~~~L~~~Gi~~~ 402 (474)
T 1wyu_B 330 AWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PE-----GFRALDLAKGLLELGFHPP 402 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-ST-----TCCHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CC-----CCCHHHHHHHHHHCCcccc
Confidence 7888888999999999999999999999999987 78774332 332223333 21 2245678889988898632
Q ss_pred eeccc--cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 726 VPASQ--EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 726 s~s~~--~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+... .....+ +++...+|++|+|++++.|+++..
T Consensus 403 -~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 403 -TVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp -EESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT
T ss_pred -ccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 1111 123456 888888899999999999998864
No 46
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.56 E-value=2.1e-13 Score=150.74 Aligned_cols=282 Identities=13% Similarity=0.059 Sum_probs=179.7
Q ss_pred CCCCccccccCCCCCCH-HHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCc
Q psy852 14 HWQHPRFHAYFPSGNSY-PSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDI 92 (891)
Q Consensus 14 ~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~ 92 (891)
+...|+++.+.+++... +.++..+.....+ ...+....+..++.+++++++|.+.... .
T Consensus 18 ~~~~~~~~~~~p~p~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~l~~~la~~~~~~~~~~-------v------- 77 (393)
T 3kgw_A 18 PLSVPTRLLLGPGPSNLAPRVLAAGSLRMIG------HMQKEMLQIMEEIKQGIQYVFQTRNPLT-------L------- 77 (393)
T ss_dssp CCCCCCCEECSSSCCCCCHHHHHHTTCCCCC------TTSHHHHHHHHHHHHHHHHHHTCCCSEE-------E-------
T ss_pred CCCCccceeccCCCCCCCHHHHHHhcccccC------cccHHHHHHHHHHHHHHHHHhCCCCCcE-------E-------
Confidence 34467777777665544 4444333221111 2346667888889999999999874310 0
Q ss_pred cccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHH--HHHHHHcCCeEEEEe
Q psy852 93 DMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCV--EKAAMMAFVRLKILE 170 (891)
Q Consensus 93 ~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv--~kaa~~~~~~v~~V~ 170 (891)
.+++||+......+..+ .. ++..|+++..+||+. ...+...|.+++.++
T Consensus 78 --------------~~~~gg~~al~~~~~~~--~~-------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~ 128 (393)
T 3kgw_A 78 --------------VVSGSGHCAMETALFNL--LE-------------PGDSFLTGTNGIWGMRAAEIADRIGARVHQMI 128 (393)
T ss_dssp --------------EESCCTTTHHHHHHHHH--CC-------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEE
T ss_pred --------------EEeCCcHHHHHHHHHhc--CC-------------CCCEEEEEeCCchhHHHHHHHHHcCCceEEEe
Confidence 13457764432222222 11 112356666777643 555666788999999
Q ss_pred cCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeecccc-CCccccCCCCccCC
Q psy852 171 PDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYA-GSSFICPEFRPFMN 249 (891)
Q Consensus 171 ~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~G-G~~~~~~~~~~~~~ 249 (891)
++.++.+|+++|++.+++.. +.+|+++..+|.+|.+.|+++|.++|+++|+++++|++++ |...+
T Consensus 129 ~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~--------- 194 (393)
T 3kgw_A 129 KKPGEHYTLQEVEEGLAQHK-----PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPI--------- 194 (393)
T ss_dssp CCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCC---------
T ss_pred CCCCCCCCHHHHHHHHhhCC-----CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCccc---------
Confidence 99999999999999998732 4578888889999999999999999999999999999884 11000
Q ss_pred CCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccccccccc
Q psy852 250 GKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDA 329 (891)
Q Consensus 250 g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (891)
T Consensus 195 -------------------------------------------------------------------------------- 194 (393)
T 3kgw_A 195 -------------------------------------------------------------------------------- 194 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcc-c----CccccCCCC
Q psy852 330 IFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-V----DPLYLQHGH 404 (891)
Q Consensus 330 ~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~-~----~~~y~~~~~ 404 (891)
. . +. ..+|.+++++||++++|.+.|++++++.. ...+. . .+-|+....
T Consensus 195 ------------------~--~----~~-~~~d~~~~s~sK~~~~~~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 247 (393)
T 3kgw_A 195 ------------------Y--M----DQ-QGIDIMYSSSQKVLNAPPGISLISFNDKA--KYKVYSRKTKPVSFYTDITY 247 (393)
T ss_dssp ------------------C--T----TT-TTCCEEEEESSSTTCCCSSCEEEEECHHH--HHHHHTCSSCCSCSTTCHHH
T ss_pred ------------------c--h----hh-cCCCEEEecCcccccCCCceeEEEECHHH--HHHHhccCCCCCceeecHHH
Confidence 0 0 00 13589999999999999999999997642 11111 1 111110000
Q ss_pred C-Cccc--ccccccCCCCC-hhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCcccccc
Q psy852 405 E-GAID--YRHWGIPLSRR-FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 405 ~-~~~~--~~~~~~~~sr~-~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~ 466 (891)
. ..+. .......++-. ....++..+++.+..+++.++.++..++++++.+.|++. +++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 312 (393)
T 3kgw_A 248 LAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFFV 312 (393)
T ss_dssp HHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSS
T ss_pred HHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeecc
Confidence 0 0000 00000111222 234566778888888889999999999999999999887 777663
No 47
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.56 E-value=6.7e-13 Score=146.24 Aligned_cols=171 Identities=12% Similarity=0.099 Sum_probs=121.1
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCC--C-CCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIGC--I-GFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMN 95 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n~--~-~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~ 95 (891)
.|+++-..+...+.++..+....-+. + ...+..+........++.+++++++|.+.+..
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v------------------ 64 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEI------------------ 64 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGE------------------
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeE------------------
Confidence 47777777777788777776655432 1 11233344556778889999999999764321
Q ss_pred ccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHH---HHcCCeEEEEecC
Q psy852 96 IEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA---MMAFVRLKILEPD 172 (891)
Q Consensus 96 ~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa---~~~~~~v~~V~~d 172 (891)
.+++||+..... ++...+... .. +...|+++..+|+++..++ ...|.+++.|+++
T Consensus 65 -----------~~~~g~t~a~~~-~~~~~~~~~-~~---------~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (384)
T 1eg5_A 65 -----------FFTSCATESINW-ILKTVAETF-EK---------RKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD 122 (384)
T ss_dssp -----------EEESCHHHHHHH-HHHHHHHHT-TT---------TCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC
T ss_pred -----------EEECCHHHHHHH-HHHhhhhhc-cC---------CCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC
Confidence 135677644333 333222100 00 1224788889999987766 4567899999999
Q ss_pred CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcC--Cceeeecccc
Q psy852 173 DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFD--VWLHVDGAYA 235 (891)
Q Consensus 173 ~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~--~~lHvDaA~G 235 (891)
++|.+|+++|++++++. +.+|+++..+|.+|.+.|+++|.++|+++| +++++|.|++
T Consensus 123 ~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~ 181 (384)
T 1eg5_A 123 SRGVVKLEELEKLVDED------TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQT 181 (384)
T ss_dssp TTSCBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTT
T ss_pred CCCccCHHHHHHHhCCC------CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhh
Confidence 99999999999988653 457778899999999999999999999999 8888888883
No 48
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.56 E-value=1.9e-13 Score=152.05 Aligned_cols=277 Identities=15% Similarity=0.074 Sum_probs=183.5
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCC-CCCCCCCCCCCCCCCCcccccc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEK-FLMYPPQGKNATTPNDIDMNIE 97 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~-~~~~~~~~~g~~tp~~~~~~~~ 97 (891)
.|+.+..+....+.++..+.....+ ..++...++..++.+++++++|.+.. ..
T Consensus 35 ~~l~~~~~~~~~~~v~~a~~~~~~~------~~~~~~~~~~~~~~~~la~~~g~~~~~~v-------------------- 88 (393)
T 1vjo_A 35 RLLLGPGPSNAHPSVLQAMNVSPVG------HLDPAFLALMDEIQSLLRYVWQTENPLTI-------------------- 88 (393)
T ss_dssp CEECSSSCCCCCHHHHHHHSSCCCC------TTSHHHHHHHHHHHHHHHHHHTCCCSCEE--------------------
T ss_pred ceeccCCCCCCCHHHHHHHhccccc------ccCHHHHHHHHHHHHHHHHHhCCCCCcEE--------------------
Confidence 4777766666667766555433322 23455778888999999999998643 11
Q ss_pred ccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChH--HHHHHHHcCCeEEEEecCCCC
Q psy852 98 DYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAAMMAFVRLKILEPDDKN 175 (891)
Q Consensus 98 ~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~S--v~kaa~~~~~~v~~V~~d~~g 175 (891)
.+++||+......+..+ .. +.-.|+++..+|++ +..++...|.+++.|+++.+|
T Consensus 89 ---------~~t~g~t~al~~~~~~~-~~--------------~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 144 (393)
T 1vjo_A 89 ---------AVSGTGTAAMEATIANA-VE--------------PGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGE 144 (393)
T ss_dssp ---------EESSCHHHHHHHHHHHH-CC--------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTC
T ss_pred ---------EEeCchHHHHHHHHHhc-cC--------------CCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCC
Confidence 13567764433322222 11 11237777788988 777777778899999999999
Q ss_pred cccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccc
Q psy852 176 SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFD 255 (891)
Q Consensus 176 ~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d 255 (891)
.+|+++|++.+++. .+.+|+++..+|.+|.+.|+++|+++|+++|+++++|.+++ +...
T Consensus 145 ~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~-~g~~--------------- 203 (393)
T 1vjo_A 145 VFSLEELRTALETH-----RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTS-LGGV--------------- 203 (393)
T ss_dssp CCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTT-TTTS---------------
T ss_pred CCCHHHHHHHHhhC-----CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCcc-ccCc---------------
Confidence 99999999999863 13478888999999999999999999999999999999984 1000
Q ss_pred cCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEE
Q psy852 256 NLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWL 335 (891)
Q Consensus 256 ~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (891)
T Consensus 204 -------------------------------------------------------------------------------- 203 (393)
T 1vjo_A 204 -------------------------------------------------------------------------------- 203 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhccc-----CccccCCCCCCcccc
Q psy852 336 HVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-----DPLYLQHGHEGAIDY 410 (891)
Q Consensus 336 ~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~-----~~~y~~~~~~~~~~~ 410 (891)
... +.. ..+|.++.++||++++|.++|++++++.. ...+.. .+.|........+ .
T Consensus 204 ------------~~~----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~ 263 (393)
T 1vjo_A 204 ------------PIF----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSSRA--IEKLQRRRTKVANWYLDMNLLGKY-W 263 (393)
T ss_dssp ------------CCC----TTT-TTCSEEECCSSSTTCSCSSCEEEEECHHH--HHHHHTCSSCCSCSTTCHHHHHHH-H
T ss_pred ------------CCc----ccc-cCccEEEEcCcccccCCCceEEEEECHHH--HHHHhccCCCCCceecCcHhhhhh-h
Confidence 000 000 13589999999999999999999998642 111211 1111100000000 0
Q ss_pred cccccCC-CCC-hhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 411 RHWGIPL-SRR-FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 411 ~~~~~~~-sr~-~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
....... +.. ....+++.+++.+..+++.++.++..++++++.+.|++. +++++.+
T Consensus 264 ~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 321 (393)
T 1vjo_A 264 GSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVE 321 (393)
T ss_dssp STTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSC
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCC
Confidence 0001111 222 234567778887767788999999999999999999886 7777643
No 49
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.55 E-value=1.7e-14 Score=168.17 Aligned_cols=168 Identities=26% Similarity=0.333 Sum_probs=123.3
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccc-cccceEEEecccchHHHHHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGV-LLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~-~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
++.+++++.+... .-.++ +++|||++|++++.++|.++.+..+. .|. ..++++|++|..+|+|+.+++.+
T Consensus 152 ~~~~~la~l~g~~-~~~~~--~t~ggtea~~~al~~ar~~~~~~~~~------~G~~~~~~~~vl~s~~~h~s~~~~~~~ 222 (515)
T 2jis_A 152 EVLRKLRALVGWS-SGDGI--FCPGGSISNMYAVNLARYQRYPDCKQ------RGLRTLPPLALFTSKECHYSIQKGAAF 222 (515)
T ss_dssp HHHHHHHHHHTCS-SCEEE--EESSHHHHHHHHHHHHHHHHCTTHHH------HCGGGSCCEEEEEETTSCTHHHHHHHH
T ss_pred HHHHHHHHHhCCC-CCCeE--EcCCcHHHHHHHHHHHHHHHhhHHhh------cCccccCCeEEEECCCccHHHHHHHHH
Confidence 3444566666432 22444 78999999999999999865321110 111 12467899999999999999998
Q ss_pred cCc---eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhh---------------
Q psy852 526 AFV---RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYR--------------- 574 (891)
Q Consensus 526 ~gv---~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~--------------- 574 (891)
.|. +++.||+|++|+||+++|+++|+++.+.|..|.+|+.+.|++. |++
T Consensus 223 ~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~ 302 (515)
T 2jis_A 223 LGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSV 302 (515)
T ss_dssp TTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGG
T ss_pred cCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHH
Confidence 766 8999999999999999999999988777877889998888764 322
Q ss_pred --------hhcCCCCccEEEEcCcccCCcccccEEEEEeCC-ccchhhhccCCCcccc
Q psy852 575 --------KSQGIEYADSFNVNVNKWLLTAFDSSCLWVADR-YKLTSALVVDPLYLQH 623 (891)
Q Consensus 575 --------~ldGi~~aDSIs~d~HK~L~~P~g~G~llvR~~-~~L~~~l~~~~~Yl~~ 623 (891)
.++|++.+||+++|+|||+++|++||++++|++ ..+...+...+.|+.+
T Consensus 303 ~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~ 360 (515)
T 2jis_A 303 LLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQ 360 (515)
T ss_dssp GGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC-------
T ss_pred HhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccC
Confidence 144667899999999999999999999999988 5555555556677654
No 50
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.54 E-value=1.9e-13 Score=152.71 Aligned_cols=171 Identities=7% Similarity=-0.070 Sum_probs=119.7
Q ss_pred ccccccCCCCCCHHHHHHHHHHHhcC---CCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccc
Q psy852 18 PRFHAYFPSGNSYPSVLADMLSDAIG---CIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDM 94 (891)
Q Consensus 18 p~~~~~~~~~~~~~~~~~~~l~~~~n---~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~ 94 (891)
..|+++-.++...+.++..+...+-+ +....|..++.......++.+++++++|.+....
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v----------------- 89 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGV----------------- 89 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGE-----------------
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeE-----------------
Confidence 46888876666677776665554432 1122344445566777888999999999864321
Q ss_pred cccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHH----cCCeEEEEe
Q psy852 95 NIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM----AFVRLKILE 170 (891)
Q Consensus 95 ~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~----~~~~v~~V~ 170 (891)
.+++||+.........+++... +...|+++..+|.++..++.. .|.+++.|+
T Consensus 90 ------------~~~~g~t~al~~~~~~l~~~~~------------~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~ 145 (406)
T 3cai_A 90 ------------VLGADRAVLLSLLAEASSSRAG------------LGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAE 145 (406)
T ss_dssp ------------EEESCHHHHHHHHHHHTGGGGB------------TTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEEC
T ss_pred ------------EEeCChHHHHHHHHHHHhhccC------------CCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEe
Confidence 1356776322211112221111 123488888999998776632 577999999
Q ss_pred cC-CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeecccc
Q psy852 171 PD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 171 ~d-~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
++ ++|.+|+++|++.+++. +.+|+++..+|.+|.+.|+++|.++|+++|+++++|+|++
T Consensus 146 ~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~ 205 (406)
T 3cai_A 146 VDIETGELPTWQWESLISKS------TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAA 205 (406)
T ss_dssp CCTTTCCCCGGGHHHHCCTT------EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTT
T ss_pred cCcccCCcCHHHHHHHhCCC------ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccc
Confidence 98 78999999999988643 4688889999999999999999999999999999999884
No 51
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.54 E-value=4.8e-14 Score=157.87 Aligned_cols=278 Identities=12% Similarity=0.074 Sum_probs=176.3
Q ss_pred HHHHHHHH-HHHHhhccCCccccccCC-CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHH
Q psy852 443 RRHCELAK-LFEGKVRRDPRFEISNDV-RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVE 520 (891)
Q Consensus 443 ~~~lelAr-~l~~~L~~~~~~eVv~~i-tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~ 520 (891)
...++.++ .+++.+...+..+|+ + |+|+|+++..++...- +.. ...+|+++..+|.++.
T Consensus 49 ~~~~~~~r~~la~ll~~~~~~~v~--f~t~~~T~a~n~~~~~~~----~~~-------------~~~~i~~~~~~~~~~~ 109 (361)
T 3m5u_A 49 EEVHFGAQEKAKKLYELNDDYEVL--FLQGGASLQFAMIPMNLA----LNG-------------VCEYANTGVWTKKAIK 109 (361)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEE--EESSHHHHHHHHHHHHHC----CSS-------------CEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCceEE--EEcCcHHHHHHHHHHhcC----CCC-------------eEEEEeCCHHHHHHHH
Confidence 34455555 566666654456788 6 9999999987766431 100 1235788888887665
Q ss_pred HHHHHcCceEEEecCCCCCC--cCHHHHHHHHHhhhhcCCccEEEEec--CCccc---hhh----hhcC----------C
Q psy852 521 KAAMMAFVRLKILEPDDKNS--LRGATLRQVMQQDETMGYIPFFVSTT--LGTTS---CYR----KSQG----------I 579 (891)
Q Consensus 521 Kaa~l~gv~v~~Vp~d~~G~--mD~~~Le~aI~~d~~~g~ip~~Vvat--aGTT~---c~~----~ldG----------i 579 (891)
.+.+ .|++++.||++.+|. ++++. + |+++++ ...++.++ .|+.. |.. ++|+ +
T Consensus 110 ~a~~-~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~---lv~~~~~e~~tG~~~~~i~~~~~~~~vD~~q~~g~~~id~ 182 (361)
T 3m5u_A 110 EAQI-LGVNVKTVASSEESNFDHIPRV-E--FSDNAD---YAYICSNNTIYGTQYQNYPKTKTPLIVDASSDFFSRKVDF 182 (361)
T ss_dssp HHHH-TTCCEEEEEECTTTTSCSCCCC-C--CCTTSS---EEEEESEETTTTEECSSCCCCSSCEEEECGGGTTSSCCCC
T ss_pred HHHH-cCCceEEEecccCcCCCcCChh-h--cCCCCC---EEEEeCCCCCcceeCCcccccCCEEEEEcccccCCCCCCc
Confidence 5444 478999999998885 56666 3 655432 22233233 36642 211 2333 3
Q ss_pred CCccEEEEcCcccCCcccccEEEEEeCCccchhhhc--cCCCccccCCCCCccccCCccccccc-ccchHHHHHHHHHHH
Q psy852 580 EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV--VDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRTYGL 656 (891)
Q Consensus 580 ~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~--~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~lG~ 656 (891)
+.+|.+++++|||++ |.|+|++++|++.. . .+. ..+.|+.-..... .. ...++-. ...+.+-.+++.+-.
T Consensus 183 ~~~d~~~~s~~K~~g-p~G~g~l~~~~~~~-~-~~~~~~~p~~~~~~~~~~---~~-~~~~Tp~v~~i~~l~~al~~l~~ 255 (361)
T 3m5u_A 183 SNIALFYGGVQKNAG-ISGLSCIFIRKDML-E-RSKNKQIPSMLNYLTHAE---NQ-SLFNTPPTFAIYMFNLEMDWLLN 255 (361)
T ss_dssp TTEEEEEEETTTTSS-CTTCEEEEEEHHHH-H-HHHTCCCCGGGCHHHHHH---TT-TCSSCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCEEEEechhccC-CCccEEEEEcHHHH-h-hhcCCCCCceeehHHHhh---cC-CCCCCccHHHHHHHHHHHHHHHH
Confidence 458999999999995 99999999997632 1 111 1222221000000 00 0001111 123456677777777
Q ss_pred h-hHHHHHHHHHHHHHHHHHHhccCCCc-EEeCCC--c-eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecccc
Q psy852 657 S-GLQKYIRRHCELAKLFEGKVRRDPRF-EISNDV--R-LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQE 731 (891)
Q Consensus 657 ~-G~~~~i~~~~~lA~~L~~~L~~~~~~-eil~~~--~-~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~ 731 (891)
. |++++.++..+++++|.++|++++++ ++..++ . .++++|++++. ......+...|.+.|+....+-...
T Consensus 256 ~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~-----~~~~~~~~~~L~~~gI~~~~g~~~~ 330 (361)
T 3m5u_A 256 QGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKN-----KDLEPLFVKEAEEAGMIGLKGHRIL 330 (361)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSC-----TTHHHHHHHHHHHTTEECCBCCTTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCc-----hhhhHHHHHHHHHCCCEEecCCCcc
Confidence 7 89999999999999999999999876 665433 2 36999999751 0122467788888998743332222
Q ss_pred CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..+ +|+++++|++|||+++++|+++.+
T Consensus 331 --g~iRiS~~~~~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 331 --GGIRASIYNALNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp --CSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred --CeEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 236 999999999999999999998763
No 52
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.54 E-value=3.2e-13 Score=149.97 Aligned_cols=250 Identities=14% Similarity=0.061 Sum_probs=163.0
Q ss_pred ChhHHHHHHHHHHHHHHHcCCCCC-CCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc
Q psy852 52 SPSCTELETIVLDWLGKAIGLPEK-FLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI 130 (891)
Q Consensus 52 ~p~~~~~E~~~~~~l~~l~g~~~~-~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~ 130 (891)
+|.......++.+++++++|.+.. .. .+++||+......+..+ . .
T Consensus 47 ~~~~~~~~~~l~~~la~~~g~~~~~~i-----------------------------~~~~g~t~a~~~~~~~~-~-~--- 92 (393)
T 2huf_A 47 HPETLKIMDDIKEGVRYLFQTNNIATF-----------------------------CLSASGHGGMEATLCNL-L-E--- 92 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCCSEEE-----------------------------EESSCHHHHHHHHHHHH-C-C---
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCcEE-----------------------------EEcCcHHHHHHHHHHHH-h-C---
Confidence 566678888999999999998643 11 13467765433322222 1 1
Q ss_pred CCccccccccCCeEEEecCCCChHHH--HHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc
Q psy852 131 HPFVDEGVLLSKLMAYCSKEAHSCVE--KAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC 208 (891)
Q Consensus 131 ~~~~~~g~~~~~~~v~~S~~~H~Sv~--kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~ 208 (891)
+.-.|+++..+|++.. +.+...|.+++.+++++++.+|+++|++.+++.. +.+|+++..+|.+
T Consensus 93 ----------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~npt 157 (393)
T 2huf_A 93 ----------DGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHK-----PSVLFLTQGDSST 157 (393)
T ss_dssp ----------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHC-----CSEEEEESEETTT
T ss_pred ----------CCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccC-----CcEEEEEccCCCc
Confidence 1123777778888842 2334467799999999999999999999997621 3578888999999
Q ss_pred ccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhh
Q psy852 209 CSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISK 288 (891)
Q Consensus 209 GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 288 (891)
|.+.|+++|+++|+++|+++++|+|++....
T Consensus 158 G~~~~l~~i~~~~~~~~~~li~D~a~~~~~~------------------------------------------------- 188 (393)
T 2huf_A 158 GVLQGLEGVGALCHQHNCLLIVDTVASLGGA------------------------------------------------- 188 (393)
T ss_dssp TEECCCTTHHHHHHHTTCEEEEECTTTBTTB-------------------------------------------------
T ss_pred cccCCHHHHHHHHHHcCCEEEEEcccccCCC-------------------------------------------------
Confidence 9999999999999999999999998721000
Q ss_pred hcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeC
Q psy852 289 LKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNV 368 (891)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~ 368 (891)
... +.. ..+|.++.++
T Consensus 189 -----------------------------------------------------------~~~----~~~-~~~d~~~~s~ 204 (393)
T 2huf_A 189 -----------------------------------------------------------PMF----MDR-WEIDAMYTGS 204 (393)
T ss_dssp -----------------------------------------------------------CCC----TTT-TTCSEEECCS
T ss_pred -----------------------------------------------------------Ccc----hhh-cCccEEEECC
Confidence 000 000 0268999999
Q ss_pred CCcCCccCCceEEEEeccccchhhccc----CccccCCCC-----CCcccccccccCCCCChh-HHHHHHHHHHhcHHHH
Q psy852 369 NKWLLTAFDSSCLWVADRYKLTSALVV----DPLYLQHGH-----EGAIDYRHWGIPLSRRFR-SLKLWFVIRTYGLSGL 438 (891)
Q Consensus 369 HK~~~~p~~~g~~~~r~~~~~~~~~~~----~~~y~~~~~-----~~~~~~~~~~~~~sr~~~-~l~~w~~l~~~g~~G~ 438 (891)
|||+++|.+.|++++++. +...+.. ..+|..+.. .+......+ ..++.... ..++..+++.+...++
T Consensus 205 sK~l~g~~G~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~ 281 (393)
T 2huf_A 205 QKVLGAPPGITPVSFSHR--AVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRI-YHHTISSTLLYGLREAIAMACEEGL 281 (393)
T ss_dssp SSTTCCCSSCEEEEECHH--HHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC-CSCCCCHHHHHHHHHHHHHHHHHCH
T ss_pred CcccccCCCeEEEEECHH--HHHHHhhcCCCCceEEEchHHHHhhhccccccCC-CCCCCCHHHHHHHHHHHHHHHHhCH
Confidence 999999999999998743 2222211 112211000 000000001 11222332 3455567777766778
Q ss_pred HHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 439 QKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 439 ~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
.++.++..++++++.+.|.+. +++++.+
T Consensus 282 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 309 (393)
T 2huf_A 282 PALIARHEDCAKRLYRGLQDA-GFELYAD 309 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCBSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCeeccC
Confidence 999999999999999999887 7776643
No 53
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.53 E-value=2.9e-13 Score=149.45 Aligned_cols=285 Identities=13% Similarity=0.031 Sum_probs=173.9
Q ss_pred ccccccCCCCCCH-HHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccc
Q psy852 18 PRFHAYFPSGNSY-PSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNI 96 (891)
Q Consensus 18 p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~ 96 (891)
|+++.+.+++... +.++.. +..... .+ .+|.......++.++++++++...+. +|+.+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a-~~~~~~----~~-~~~~~~~~~~~~~~~l~~~~~~~~~~-----------~~~~v---- 62 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKA-LDVPSL----GH-TSPEFVSIFQRVLKNTRAVFKSAAAS-----------KSQPF---- 62 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHT-TSCCCC----CT-TSHHHHHHHHHHHHHHHHHTTCCGGG-----------TCEEE----
T ss_pred ccceeecCCCcCchHHHHHH-Hhcccc----cc-CCHHHHHHHHHHHHHHHHHhCCCCCC-----------CCceE----
Confidence 4445555555444 443333 222221 12 36766667777889999999875321 01111
Q ss_pred cccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEe-cCCCChHHHHHHHHcCCeEEEEec-CCC
Q psy852 97 EDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYC-SKEAHSCVEKAAMMAFVRLKILEP-DDK 174 (891)
Q Consensus 97 ~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~-S~~~H~Sv~kaa~~~~~~v~~V~~-d~~ 174 (891)
.+++||+......+..+.+.. .| .+-+++. +...|.++.+++...|.+++.|++ +.+
T Consensus 63 ----------~~~~g~t~al~~~~~~~~~~~---~~--------gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 121 (385)
T 2bkw_A 63 ----------VLAGSGTLGWDIFASNFILSK---AP--------NKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIG 121 (385)
T ss_dssp ----------EEESCTTHHHHHHHHHHSCTT---CS--------CCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTT
T ss_pred ----------EEcCchHHHHHHHHHHHhccC---CC--------CCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCC
Confidence 145677754333333332110 00 1223333 344566665666667789999999 889
Q ss_pred CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc--CCceeeeccccCCccccCCCCccCCCCc
Q psy852 175 NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF--DVWLHVDGAYAGSSFICPEFRPFMNGKT 252 (891)
Q Consensus 175 g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~--~~~lHvDaA~GG~~~~~~~~~~~~~g~~ 252 (891)
|.+|+++|++++++. .+.+|+++..+|.+|.+.|+++|+++|+++ |+++|+|+|++....
T Consensus 122 ~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~------------- 183 (385)
T 2bkw_A 122 ESVPLELITEKLSQN-----SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCE------------- 183 (385)
T ss_dssp SCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTS-------------
T ss_pred CCCCHHHHHHHHhcC-----CCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCc-------------
Confidence 999999999999762 145788899999999999999999999999 888899988832100
Q ss_pred ccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccc
Q psy852 253 SFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFD 332 (891)
Q Consensus 253 ~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (891)
T Consensus 184 -------------------------------------------------------------------------------- 183 (385)
T 2bkw_A 184 -------------------------------------------------------------------------------- 183 (385)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcc-----cCccccCCCCCCc
Q psy852 333 VWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-----VDPLYLQHGHEGA 407 (891)
Q Consensus 333 ~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~-----~~~~y~~~~~~~~ 407 (891)
... +... .+|.++.++|||+++|.+.|++++++.. +...+. ....|.... ..
T Consensus 184 ---------------~~~----~~~~-~~d~~~~s~~K~~~~~~G~G~~~~~~~~-~~~~l~~~~~~~~~~~~~~~--~~ 240 (385)
T 2bkw_A 184 ---------------EFE----FDEW-GVDFALTASQKAIGAPAGLSISLCSSRF-MDYALNDSKNGHVHGYFSSL--RR 240 (385)
T ss_dssp ---------------CCC----TTTT-TCSEEEEESSSTTCCCSCEEEEEECHHH-HHHHTCHHHHCCCSCSTTCH--HH
T ss_pred ---------------ccc----cccc-CceEEEecCccccccCCcceEEEEcHHH-HHHHHhhccCCCCCceeecH--HH
Confidence 000 0011 3689999999999999999999987642 110111 001111000 00
Q ss_pred ccc--ccccc-----CCCCCh-hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhh-ccCCcccccc
Q psy852 408 IDY--RHWGI-----PLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKV-RRDPRFEISN 466 (891)
Q Consensus 408 ~~~--~~~~~-----~~sr~~-~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L-~~~~~~eVv~ 466 (891)
+.. ..+.. .++-.. ..+++..+++.+...|+.++.++..++++++.+.| ++. +++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~ 307 (385)
T 2bkw_A 241 WTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QLTSVS 307 (385)
T ss_dssp HHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEESS
T ss_pred HhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Cceecc
Confidence 000 00100 112222 33456677777766778999999999999999999 876 777764
No 54
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.51 E-value=3.4e-14 Score=159.88 Aligned_cols=271 Identities=12% Similarity=-0.011 Sum_probs=177.9
Q ss_pred cccCCCCCCHHHHHHHHHHHhcCC--CCCc----cccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccc
Q psy852 21 HAYFPSGNSYPSVLADMLSDAIGC--IGFS----WAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDM 94 (891)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~~~n~--~~~~----~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~ 94 (891)
++.-.+.+.++.++..|...+.+. |+.+ ...++.+.++-.++.+.+++++|.++..- +
T Consensus 16 ~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~e--------------v-- 79 (377)
T 3e77_A 16 ENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYK--------------V-- 79 (377)
T ss_dssp CCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEE--------------E--
T ss_pred ccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCe--------------E--
Confidence 444456778889999888876532 2222 33577888999999999999999975310 0
Q ss_pred cccccCCCCCCCCc-ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHH---cCCeEEEEe
Q psy852 95 NIEDYMTPANQPQS-LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM---AFVRLKILE 170 (891)
Q Consensus 95 ~~~~~~t~~~~~~~-~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~---~~~~v~~V~ 170 (891)
.| ++|||.+.|+.+.++.+.+.+ ..+.....+|++. +++.+ .|..++.++
T Consensus 80 ------------if~t~~~T~a~n~a~~~l~~~~~G-------------d~v~~~~~g~~~~-~~~~~a~~~G~~~~~~~ 133 (377)
T 3e77_A 80 ------------IFLQGGGCGQFSAVPLNLIGLKAG-------------RCADYVVTGAWSA-KAAEEAKKFGTINIVHP 133 (377)
T ss_dssp ------------EEESSHHHHHHHHHHHHHGGGSTT-------------CEEEECCCSHHHH-HHHHHHTTTSEEEECSC
T ss_pred ------------EEEcCchHHHHHHHHHhccCCCCC-------------CeEEEEECCHHHH-HHHHHHHHhCCceEEec
Confidence 24 478888877777776433211 1244555667764 44432 355777788
Q ss_pred cCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCC
Q psy852 171 PDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNG 250 (891)
Q Consensus 171 ~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g 250 (891)
+|.++.+++++++..++++ +.+|+++..+|.+|++.|+ +|+++|+++|||++++-
T Consensus 134 ~~~~~~~~~~~~~~~i~~~------t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~-------------- 188 (377)
T 3e77_A 134 KLGSYTKIPDPSTWNLNPD------ASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNF-------------- 188 (377)
T ss_dssp CCSSSCSCCCGGGCCCCTT------CSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTT--------------
T ss_pred cCCCcCCCCChHHhccCCC------ccEEEEeCccCchheEchh-----hhccCCCEEEEEccccc--------------
Confidence 8877788888876655544 3578899999999999999 47788888888888721
Q ss_pred CcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccc
Q psy852 251 KTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAI 330 (891)
Q Consensus 251 ~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (891)
T Consensus 189 -------------------------------------------------------------------------------- 188 (377)
T 3e77_A 189 -------------------------------------------------------------------------------- 188 (377)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCcccc
Q psy852 331 FDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDY 410 (891)
Q Consensus 331 ~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~~ 410 (891)
+.. .-++.. .|-+++++|||+ +|.+.|++++|++.. ...-...|.|+..... .
T Consensus 189 -------------g~~-~id~~~-------~~~~~~s~~K~~-gp~G~g~l~~~~~~l-~~~~~~~p~~~~~~~~--~-- 241 (377)
T 3e77_A 189 -------------LSK-PVDVSK-------FGVIFAGAQKNV-GSAGVTVVIVRDDLL-GFALRECPSVLEYKVQ--A-- 241 (377)
T ss_dssp -------------TSS-CCCGGG-------CSEEEEEGGGTT-SCTTCEEEEEETTSC-SCCCTTSCGGGCHHHH--H--
T ss_pred -------------CCC-CCchhh-------cCEEEEeccccc-CCCccEEEEEcHHHH-hhccCCCCchhhHHHH--h--
Confidence 000 000011 245889999999 699999999997632 1111112333210000 0
Q ss_pred cccccCCCCCh-hHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhhccCCccccc
Q psy852 411 RHWGIPLSRRF-RSLKLWFVIRTYGLS-GLQKYIRRHCELAKLFEGKVRRDPRFEIS 465 (891)
Q Consensus 411 ~~~~~~~sr~~-~~l~~w~~l~~~g~~-G~~~ii~~~lelAr~l~~~L~~~~~~eVv 465 (891)
......++-+. ..+.+-.+++++-.+ |+.++.++..++++++++.|.+.+++++.
T Consensus 242 ~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~ 298 (377)
T 3e77_A 242 GNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVC 298 (377)
T ss_dssp TTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEEC
T ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceec
Confidence 00011122222 355777889988888 99999999999999999999998887653
No 55
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.51 E-value=9.4e-13 Score=149.94 Aligned_cols=240 Identities=13% Similarity=0.041 Sum_probs=158.9
Q ss_pred ccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHH-Hhcc
Q psy852 50 AASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLT-RGQK 128 (891)
Q Consensus 50 ~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~a-r~~~ 128 (891)
+.++...+++.++.+++++++|.+... . .++.||+.... .+.++ +..
T Consensus 101 ~~~~g~~~~~~~~~~~la~~~g~~~~~--------i---------------------~~~~g~taa~e--a~~~a~~~~- 148 (438)
T 1wyu_A 101 EVSQGVLQATFEYQTMIAELAGLEIAN--------A---------------------SMYDGATALAE--GVLLALRET- 148 (438)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHTSSEEC--------S---------------------CBSSHHHHHHH--HHHHHHHHH-
T ss_pred hhhhhHHHHHHHHHHHHHHHhCCCccc--------e---------------------EEeCcHHHHHH--HHHHHHhcC-
Confidence 468888999999999999999997432 1 12346652211 22222 222
Q ss_pred ccCCccccccccCCeEEEecCCCChHHHHHHH----HcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecc
Q psy852 129 KIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM----MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLG 204 (891)
Q Consensus 129 ~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~----~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~G 204 (891)
++..|+++..+|+|...++. ..|.+++.|++ ++|.+|+++ |.+ .+.+|+++..
T Consensus 149 ------------~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~~------~t~~v~i~~p 205 (438)
T 1wyu_A 149 ------------GRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VGE------EVGAVVVQNP 205 (438)
T ss_dssp ------------TCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CCT------TEEEEEEESS
T ss_pred ------------CCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hCC------CeEEEEEECC
Confidence 12248889999999987663 36789999998 678999887 332 2567888887
Q ss_pred cCccccccCHHHHHHHHHHcCCceeeecc---ccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhh
Q psy852 205 TTSCCSFDNLAEIGPVAKEFDVWLHVDGA---YAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSA 281 (891)
Q Consensus 205 tt~~GavDpl~~I~~i~~~~~~~lHvDaA---~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~ 281 (891)
|.+|.++|+++|+++|+++|+++|+|+. +|.+.
T Consensus 206 -n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~------------------------------------------- 241 (438)
T 1wyu_A 206 -NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLK------------------------------------------- 241 (438)
T ss_dssp -CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBC-------------------------------------------
T ss_pred -CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcC-------------------------------------------
Confidence 9999999999999999999999996643 32100
Q ss_pred HHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcc
Q psy852 282 RAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYA 361 (891)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ 361 (891)
.+ +-..+
T Consensus 242 ------------------------------------------------------------------~~-------~~~g~ 248 (438)
T 1wyu_A 242 ------------------------------------------------------------------PP-------GAYGA 248 (438)
T ss_dssp ------------------------------------------------------------------CH-------HHHTC
T ss_pred ------------------------------------------------------------------CC-------ccCCC
Confidence 00 00136
Q ss_pred cEEEEeCCC-----cCCccCCceEEEEeccccchhhcccCccccCCCC---CC--cccc----------cccccCCC--C
Q psy852 362 DSFNVNVNK-----WLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGH---EG--AIDY----------RHWGIPLS--R 419 (891)
Q Consensus 362 ds~~~~~HK-----~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~---~~--~~~~----------~~~~~~~s--r 419 (891)
|.++++.|| |+++| ++|++++++.. ...+ +.++.... .+ .+.+ ...+..+- -
T Consensus 249 D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~~--~~~l---~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~ 322 (438)
T 1wyu_A 249 DIAVGDGQSLGLPMGFGGP-HFGFLATKKAF--VRQL---PGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTN 322 (438)
T ss_dssp SEEEEECTTTTCCCGGGCS-CCEEEEECGGG--GGGC---CSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSC
T ss_pred CEEEECCcccCCCccCCCC-CeeEEEEcHHH--HHhC---CCceeccccccCCCcceeeeccccccccchhcccCCccch
Confidence 999999888 77889 89999998642 2211 12211000 00 0000 00011111 0
Q ss_pred -ChhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 420 -RFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 420 -~~~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
...++..|+.+..+|.+|+.++.++..++++++.+.|++.++++++.+
T Consensus 323 ~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 371 (438)
T 1wyu_A 323 AQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTP 371 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSC
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCC
Confidence 112344455589999999999999999999999999999989998854
No 56
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.51 E-value=4.8e-13 Score=149.45 Aligned_cols=282 Identities=9% Similarity=0.025 Sum_probs=180.4
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH--HHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAA 523 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S--v~Kaa 523 (891)
.++.+.+++.+...+...++ +++|+++++..++.+. . .+.-.|+++...|++ +.+++
T Consensus 47 ~~l~~~la~~~g~~~~~~~~--~~~s~t~al~~~~~~l----~---------------~~gd~Vl~~~~~~~~~~~~~~~ 105 (416)
T 3isl_A 47 NETMEMLRELFQTKNRWAYP--IDGTSRAGIEAVLASV----I---------------EPEDDVLIPIYGRFGYLLTEIA 105 (416)
T ss_dssp HHHHHHHHHHTTCCCSEEEE--EESCHHHHHHHHHHHH----C---------------CTTCEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcEEE--ecCcHHHHHHHHHHHh----c---------------CCCCEEEEecCCcccHHHHHHH
Confidence 34455666666654443332 4667889888877653 1 122357777888887 77778
Q ss_pred HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCC--------
Q psy852 524 MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGI-------- 579 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi-------- 579 (891)
...|.+++.+|.+.++.+|+++|+++|++.. ...++++ +..|+.. |+++ +|++
T Consensus 106 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~ 182 (416)
T 3isl_A 106 ERYGANVHMLECEWGTVFDPEDIIREIKKVK---PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEV 182 (416)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHHC---CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCC
T ss_pred HhcCCeeEEEecCCCCCCCHHHHHHHHhhCC---CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCc
Confidence 8889999999999999999999999998531 1122222 2356544 4442 3332
Q ss_pred ----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccC----CCcc--------ccCCCC---Cccc-------cC
Q psy852 580 ----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD----PLYL--------QHGHEG---AIDY-------RH 633 (891)
Q Consensus 580 ----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~----~~Yl--------~~~~e~---~~~~-------~~ 633 (891)
..+|.+++++|||+++|.|+|+++++++. .+.+... ..|. ..+... ..+. ..
T Consensus 183 ~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~--~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~ 260 (416)
T 3isl_A 183 KVDEWKIDAAIGGTQKCLSVPSGMAPITYNERV--ADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSE 260 (416)
T ss_dssp CTTTTTCSEEECCSSSTTCCCSSEEEEEECHHH--HHHHHTC------------------CCCCSCSTTCHHHHHHHTST
T ss_pred chhhcCCCEEEecCccccCCCCCeEEEEECHHH--HHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcc
Confidence 14799999999999999999999987652 1112100 0110 000000 0000 00
Q ss_pred Ccc-ccccc-ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc---eeEEEEEecCCcchhhhh
Q psy852 634 WGI-PLSRR-FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR---LGLVCFRLRSENNLIADQ 708 (891)
Q Consensus 634 ~ti-~~SRr-~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~---~~iV~Fr~~~~~~~~~d~ 708 (891)
... .++.. ...+.++.+++.+...|+++..++..++++++.+.|++. ++++..++. .++++|+++.. .
T Consensus 261 ~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------~ 333 (416)
T 3isl_A 261 RRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGG------I 333 (416)
T ss_dssp TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTT------C
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCC------C
Confidence 011 11111 223466777887788889999999999999999999985 888876543 46889998521 2
Q ss_pred hHHHHHHHHHhC-CcEEEeeccccCCeEE-EEecCCCCHHH-HHHHHHHHHHHHH
Q psy852 709 NNRKLLEDINAS-GRLHMVPASQEQNDEV-FELQERKRKDD-LAYKRSFFVRMLG 760 (891)
Q Consensus 709 ln~~L~~~L~~~-G~~~~s~s~~~g~~~l-~sv~~~tT~ed-Id~li~~L~ei~~ 760 (891)
...++.+.|.++ |+.+..+........+ ++++.+++.+| |+++++.|+++..
T Consensus 334 ~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~ 388 (416)
T 3isl_A 334 DGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLL 388 (416)
T ss_dssp CHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHH
Confidence 356788888776 8875444333344567 99866555555 9999999998874
No 57
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.50 E-value=4e-13 Score=152.70 Aligned_cols=235 Identities=11% Similarity=0.091 Sum_probs=159.5
Q ss_pred eEEEecccchHHHHHHHHHcCceEEEecC---CCCCCcCHHHHHHHHHhhhhcCCccEEEEecCC-----ccc-------
Q psy852 507 LMAYCSKEAHSCVEKAAMMAFVRLKILEP---DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLG-----TTS------- 571 (891)
Q Consensus 507 ~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~---d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataG-----TT~------- 571 (891)
..|+++..+|.|+.||+.+.|.+.+.|+. ++...||+++|+++|++... ..+.+|..|.. +..
T Consensus 163 d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga--~~i~~V~~Ttt~y~p~~~ddI~eIae 240 (501)
T 3hl2_A 163 KYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGP--DCILCIHSTTSCFAPRVPDRLEELAV 240 (501)
T ss_dssp CEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCG--GGEEEEEEECSCCTTBCCCCHHHHHH
T ss_pred CEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCC--CcEEEEEecCCCCCCcccccHHHHHH
Confidence 35777999999999999999999888876 55689999999999998621 12334433322 212
Q ss_pred -hhh-----hhcC------------------CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCC
Q psy852 572 -CYR-----KSQG------------------IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEG 627 (891)
Q Consensus 572 -c~~-----~ldG------------------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~ 627 (891)
|++ ++|. +.+||.++.|+||++++|+|++++++++++.+.... ..|.
T Consensus 241 Ich~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~---~~yP------ 311 (501)
T 3hl2_A 241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEIS---KMYP------ 311 (501)
T ss_dssp HHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH---HTSC------
T ss_pred HHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHH---HhCC------
Confidence 443 1221 135999999999999999999999999987665431 1221
Q ss_pred CccccCCcccccc-cccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCC---cEEeCCC-ceeEEEEEecCCc
Q psy852 628 AIDYRHWGIPLSR-RFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPR---FEISNDV-RLGLVCFRLRSEN 702 (891)
Q Consensus 628 ~~~~~~~ti~~SR-r~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~---~eil~~~-~~~iV~Fr~~~~~ 702 (891)
+.+ .+.++.+|++++.+|.+||++.++++.+++++|.++|+++.. -+++..+ ..--+++......
T Consensus 312 ----------Gr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~ 381 (501)
T 3hl2_A 312 ----------GRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLD 381 (501)
T ss_dssp ----------SCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSC
T ss_pred ----------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccc
Confidence 222 477899999999999999999999999999999999988532 4555443 2334445554331
Q ss_pred chhhhhhHHHHHHHHHhC---CcEEEeecc--------------ccCC---eEE-EEecCCCCHHHHHHHHHHHHHHHHH
Q psy852 703 NLIADQNNRKLLEDINAS---GRLHMVPAS--------------QEQN---DEV-FELQERKRKDDLAYKRSFFVRMLGL 761 (891)
Q Consensus 703 ~~~~d~ln~~L~~~L~~~---G~~~~s~s~--------------~~g~---~~l-~sv~~~tT~edId~li~~L~ei~~~ 761 (891)
.+ .+.....+...|-.+ |--++.+.. ..+. .++ +...-.++++|||.+++.|++....
T Consensus 382 ~~-~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~ 460 (501)
T 3hl2_A 382 EH-RDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKA 460 (501)
T ss_dssp TT-TSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cc-ccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 11 122233556666554 433332211 1111 134 4455579999999999999999854
Q ss_pred HH
Q psy852 762 VC 763 (891)
Q Consensus 762 ~~ 763 (891)
+.
T Consensus 461 ~~ 462 (501)
T 3hl2_A 461 VR 462 (501)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 58
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.49 E-value=7.7e-12 Score=137.84 Aligned_cols=269 Identities=12% Similarity=0.101 Sum_probs=177.4
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH-
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM- 525 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l- 525 (891)
++.+.+++.+...+. +++ +++|+++++..++.+.+..+.+ +.-.|+++..+|++...++.+
T Consensus 47 ~l~~~la~~~g~~~~-~v~--~~~g~t~a~~~~~~~l~~~~~~---------------~gd~Vl~~~~~~~~~~~~~~~~ 108 (382)
T 4eb5_A 47 EAREKVAKLVNGGGG-TVV--FTSGATEANNLAIIGYAMRNAR---------------KGKHILVSAVEHMSVINPAKFL 108 (382)
T ss_dssp HHHHHHHHHHTCTTE-EEE--EESSHHHHHHHHHHHHHHHHGG---------------GCCEEEEETTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC-eEE--EcCchHHHHHHHHHHHHhhccC---------------CCCEEEECCCcchHHHHHHHHH
Confidence 344455555554333 455 6789999999998887643211 123588899999999888764
Q ss_pred --cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec-----CCccc--------hhh----hhcCC-------
Q psy852 526 --AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT-----LGTTS--------CYR----KSQGI------- 579 (891)
Q Consensus 526 --~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat-----aGTT~--------c~~----~ldGi------- 579 (891)
.|.+++.+|.|+++.+|+++|+++|+++ +-+|+.+ .|... |++ .+|++
T Consensus 109 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~i~D~a~~~g~~~ 182 (382)
T 4eb5_A 109 QKQGFEVEYIPVGKYGEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISEVLAGKAALHIDATASVGQIE 182 (382)
T ss_dssp TTTTCEEEEECBCTTSCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEEEEECTTTBTTBC
T ss_pred HhCCcEEEEeccCCCCccCHHHHHHHhcCC------CeEEEEeccCCCccccCCHHHHHHHHHHCCCEEEEcchhcCCcc
Confidence 5889999999999999999999999753 2223222 24433 433 23321
Q ss_pred -C----CccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccchHHHHHHHH
Q psy852 580 -E----YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRT 653 (891)
Q Consensus 580 -~----~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~ 653 (891)
. .+|.++.++||+ ++|.|+|+++++++..+.+. +..... . ..+. .++-. .....++.+++.
T Consensus 183 ~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~~~-------~~~~~~-~---~~~~-~~~~~~~~~~~~~~al~~ 249 (382)
T 4eb5_A 183 VDVEKIGADMLTISSNDI-YGPKGVGALWIRKEAKLQPV-------ILGGGQ-E---NGLR-SGSENVPSIVGFGKAAEI 249 (382)
T ss_dssp CCHHHHTCSEEEEETGGG-TCCSSCEEEEEETTCCCCCS-------SCSSCT-G---GGTS-CSCCCHHHHHHHHHHHHH
T ss_pred cCccccCCCEEEeehHHh-cCCCceEEEEEccccccCce-------ecCCCc-c---cccc-CCCccHHHHHHHHHHHHH
Confidence 1 379999999998 55888999999876322211 110000 0 0000 01111 112334445554
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc---eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 654 YGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR---LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 654 lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~---~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
+ .+++.+..++..++++++.+.|++++++++..++. .++++|++.+. ....+.+.|.+.|+.+..+..+
T Consensus 250 ~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~~ 321 (382)
T 4eb5_A 250 T-AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLSLDMAGIQASTGSAC 321 (382)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTS-------CHHHHHHHHHHHTCBCBCCCGG
T ss_pred H-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCc-------CHHHHHHHHHHCCEEEeccccc
Confidence 3 34788899999999999999999988998876542 56888988632 3457888888889875443321
Q ss_pred -------------------cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 -------------------EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 -------------------~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+...+ ++++..+|++|++++++.|+++..
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 371 (382)
T 4eb5_A 322 SSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp GTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 123567 999989999999999999998874
No 59
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.48 E-value=4.3e-12 Score=140.23 Aligned_cols=280 Identities=10% Similarity=0.024 Sum_probs=178.1
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchH--HHHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHS--CVEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~--Sv~Kaa~ 524 (891)
++.+.+++.+...+.-+++ +++|+++++..++.+... +.-.|+++...|+ ....++.
T Consensus 60 ~l~~~la~~~~~~~~~~v~--~~~gg~~al~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~ 118 (393)
T 3kgw_A 60 EIKQGIQYVFQTRNPLTLV--VSGSGHCAMETALFNLLE-------------------PGDSFLTGTNGIWGMRAAEIAD 118 (393)
T ss_dssp HHHHHHHHHHTCCCSEEEE--ESCCTTTHHHHHHHHHCC-------------------TTCEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEE--EeCCcHHHHHHHHHhcCC-------------------CCCEEEEEeCCchhHHHHHHHH
Confidence 4445556666544433455 678999999888765411 1123556666776 3466677
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCC---------
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGI--------- 579 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi--------- 579 (891)
..|.+++.+|.+.++.+|+++|+++|++.. ...++++ +..|+.. |+++ +|++
T Consensus 119 ~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~ 195 (393)
T 3kgw_A 119 RIGARVHQMIKKPGEHYTLQEVEEGLAQHK---PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIY 195 (393)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHHC---CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCC
T ss_pred HcCCceEEEeCCCCCCCCHHHHHHHHhhCC---CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccc
Confidence 789999999999999999999999998731 1122333 2345543 5442 2321
Q ss_pred ---CCccEEEEcCcccCCcccccEEEEEeCCccchhhhc-cCC----CccccCC----CCCccccCCccccccc-ccchH
Q psy852 580 ---EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-VDP----LYLQHGH----EGAIDYRHWGIPLSRR-FRSLK 646 (891)
Q Consensus 580 ---~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~-~~~----~Yl~~~~----e~~~~~~~~ti~~SRr-~~aL~ 646 (891)
..+|.+++++|||+++|.|+|+++++++. + +.+. ... .|+.... ........+. .++-. .....
T Consensus 196 ~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a 272 (393)
T 3kgw_A 196 MDQQGIDIMYSSSQKVLNAPPGISLISFNDKA-K-YKVYSRKTKPVSFYTDITYLAKLWGCEGETRVI-HHTTPVTSLYC 272 (393)
T ss_dssp TTTTTCCEEEEESSSTTCCCSSCEEEEECHHH-H-HHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCC-CCCCCHHHHHH
T ss_pred hhhcCCCEEEecCcccccCCCceeEEEECHHH-H-HHHhccCCCCCceeecHHHHHHhhhhccccCCC-CCCCCHHHHHH
Confidence 23799999999999999999999987652 2 2221 111 1110000 0000000000 01111 22345
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc----eeEEEEEecCCcchhhhhhHHHHHHHHHhC-C
Q psy852 647 LWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR----LGLVCFRLRSENNLIADQNNRKLLEDINAS-G 721 (891)
Q Consensus 647 lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~----~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G 721 (891)
++.+++.+...++++..++..++++++.+.|++. ++++..+.. ..+++|++... ....++.+.|.++ |
T Consensus 273 ~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~g 345 (393)
T 3kgw_A 273 LRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAG------YNWRDIVSYVLDHFS 345 (393)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTT------BCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeCCCC------CCHHHHHHHHHHhCC
Confidence 5667777777889999999999999999999998 787764322 35677887421 2356788888887 9
Q ss_pred cEEEeeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 722 RLHMVPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 722 ~~~~s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
+.+..+........+ +++ +..+|++|++++++.|++++.
T Consensus 346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~ 386 (393)
T 3kgw_A 346 IEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQ 386 (393)
T ss_dssp EECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHH
Confidence 875554444445567 998 556799999999999998873
No 60
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.47 E-value=2.1e-12 Score=142.78 Aligned_cols=283 Identities=12% Similarity=0.084 Sum_probs=177.8
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcC---CCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIG---CIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMN 95 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n---~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~ 95 (891)
.|+++-..+...+.++..+...+-+ .+..++...+.......++.+.+++++|.+.+..
T Consensus 18 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v------------------ 79 (390)
T 1elu_A 18 TYFNFGGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTI------------------ 79 (390)
T ss_dssp EECCTTTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGE------------------
T ss_pred EEecCCccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHE------------------
Confidence 4666655555556665555444322 1112222234444666778889999998764321
Q ss_pred ccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHH----HHHcCCeEEEEec
Q psy852 96 IEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA----AMMAFVRLKILEP 171 (891)
Q Consensus 96 ~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~ka----a~~~~~~v~~V~~ 171 (891)
.+++||+.. +..++...+.. +...|+++..+|.+...+ +...|.+++.++.
T Consensus 80 -----------~~~~g~t~a-~~~~~~~~~~~-------------~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 134 (390)
T 1elu_A 80 -----------TITDNVTTG-CDIVLWGLDWH-------------QGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPV 134 (390)
T ss_dssp -----------EEESSHHHH-HHHHHHHSCCC-------------TTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECC
T ss_pred -----------EEeCChHHH-HHHHHhCCCCC-------------CCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcC
Confidence 134677643 22222222111 123478888899997654 3445779999998
Q ss_pred C--CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH----HcCCceeeeccccCCccccCCCC
Q psy852 172 D--DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK----EFDVWLHVDGAYAGSSFICPEFR 245 (891)
Q Consensus 172 d--~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~----~~~~~lHvDaA~GG~~~~~~~~~ 245 (891)
+ +++.+|+++|++.+++. +.+|+++..+|.+|.+.|+++|.++|+ ++|+++++|.|++-.
T Consensus 135 ~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g-------- 200 (390)
T 1elu_A 135 AATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAG-------- 200 (390)
T ss_dssp GGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBT--------
T ss_pred CCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccC--------
Confidence 7 68899999999988643 457888999999999999999999999 899888888888310
Q ss_pred ccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccccc
Q psy852 246 PFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQS 325 (891)
Q Consensus 246 ~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (891)
T Consensus 201 -------------------------------------------------------------------------------- 200 (390)
T 1elu_A 201 -------------------------------------------------------------------------------- 200 (390)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCC-
Q psy852 326 YRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGH- 404 (891)
Q Consensus 326 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~- 404 (891)
.. ...+ .. ..+|.++.++|||+++|+++|++++++.. ...+. +.......
T Consensus 201 -------------------~~-~~~~----~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~~--~~~~~--~~~~g~~~~ 251 (390)
T 1elu_A 201 -------------------SL-PLDF----SR-LEVDYYAFTGHKWFAGPAGVGGLYIHGDC--LGEIN--PTYVGWRSI 251 (390)
T ss_dssp -------------------TB-CCCT----TT-SCCSEEEEESSSTTCCCTTCEEEEECTTT--GGGCC--CCSCCTTTE
T ss_pred -------------------Cc-CCCh----hh-cCCCEEEccccccccCCCceEEEEECHHh--HhhcC--CccccCCcc
Confidence 00 0000 00 13589999999999999999999998642 11121 11100000
Q ss_pred -----CCcccccc--ccc-CCCCCh-hHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 405 -----EGAIDYRH--WGI-PLSRRF-RSLKLWFVIRTYGLSG-LQKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 405 -----~~~~~~~~--~~~-~~sr~~-~~l~~w~~l~~~g~~G-~~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
...+++.+ ..+ .++... ...+++.+++.+...+ +.++.++..++++++.+.|.+.++++++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 324 (390)
T 1elu_A 252 TYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLAT 324 (390)
T ss_dssp EECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCS
T ss_pred cccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecC
Confidence 00000000 011 122222 2345667787776666 889999999999999999998888888754
No 61
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.47 E-value=3.3e-12 Score=141.92 Aligned_cols=281 Identities=13% Similarity=0.060 Sum_probs=176.0
Q ss_pred CCCCccccccCCCCCCH-HHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCC-CCCCCCCCCCCCCCCC
Q psy852 14 HWQHPRFHAYFPSGNSY-PSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEK-FLMYPPQGKNATTPND 91 (891)
Q Consensus 14 ~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~-~~~~~~~~~g~~tp~~ 91 (891)
+-..|+++.+.+++... +.++. .+...... . .+|.......++.+.+++++|.+.. ..
T Consensus 13 ~~~~~~~~~~~~~p~~~~~~v~~-a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~~~~~~~~v-------------- 72 (396)
T 2ch1_A 13 PLIIPEKIMMGPGPSNCSKRVLT-AMTNTVLS---N--FHAELFRTMDEVKDGLRYIFQTENRATM-------------- 72 (396)
T ss_dssp CCCCCCCBCCSSSSCCCCHHHHH-HTTSCCCC---T--TCHHHHHHHHHHHHHHHHHHTCCCSCEE--------------
T ss_pred CCCCCcceeecCCCCCCCHHHHH-Hhcccccc---C--CChhHHHHHHHHHHHHHHHhCCCCCcEE--------------
Confidence 34455655555544433 44443 33322211 1 2566667778889999999998653 11
Q ss_pred ccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHH--HHHHHcCCeEEEE
Q psy852 92 IDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVE--KAAMMAFVRLKIL 169 (891)
Q Consensus 92 ~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~--kaa~~~~~~v~~V 169 (891)
.+++||+.........+ . . +...|+++..+|++.. +.+...|.+++.|
T Consensus 73 ---------------~~~~g~t~al~~~~~~~-~-~-------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v 122 (396)
T 2ch1_A 73 ---------------CVSGSAHAGMEAMLSNL-L-E-------------EGDRVLIAVNGIWAERAVEMSERYGADVRTI 122 (396)
T ss_dssp ---------------EESSCHHHHHHHHHHHH-C-C-------------TTCEEEEEESSHHHHHHHHHHHHTTCEEEEE
T ss_pred ---------------EECCcHHHHHHHHHHHh-c-C-------------CCCeEEEEcCCcccHHHHHHHHHcCCceEEe
Confidence 13467764432222222 1 1 1123777778888874 3556678899999
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCC
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMN 249 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~ 249 (891)
+++.++.+|+++|++.+++.. +.+|+++..+|.+|.+.|+++|.++|+++|+++++|.|++- ...
T Consensus 123 ~~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~-g~~--------- 187 (396)
T 2ch1_A 123 EGPPDRPFSLETLARAIELHQ-----PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASL-CGV--------- 187 (396)
T ss_dssp ECCTTSCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTB-TTB---------
T ss_pred cCCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccc-cCC---------
Confidence 999999999999999998631 34778889999999999999999999999999999998831 000
Q ss_pred CCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccccccccc
Q psy852 250 GKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDA 329 (891)
Q Consensus 250 g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (891)
T Consensus 188 -------------------------------------------------------------------------------- 187 (396)
T 2ch1_A 188 -------------------------------------------------------------------------------- 187 (396)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccC----ccccCCCC-
Q psy852 330 IFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD----PLYLQHGH- 404 (891)
Q Consensus 330 ~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~----~~y~~~~~- 404 (891)
... +... .+|.++.++||++++|.++|++++++. .+ ..+... ..+..+..
T Consensus 188 ------------------~~~----~~~~-~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~ 242 (396)
T 2ch1_A 188 ------------------PFY----MDKW-EIDAVYTGAQKVLGAPPGITPISISPK-AL-DVIRNRRTKSKVFYWDLLL 242 (396)
T ss_dssp ------------------CCC----TTTT-TCCEEECCCC-CCCCCSSCEEEEECHH-HH-HHHHTCSSCCSCGGGCHHH
T ss_pred ------------------ccc----hhhc-CcCEEEEcCCccccCCCCeEEEEECHH-HH-HhhhhccCcccceEechHH
Confidence 000 0000 258888999999999999999988763 12 222111 11111000
Q ss_pred ----CCcccccccccCCCCCh-hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCcccccc
Q psy852 405 ----EGAIDYRHWGIPLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 405 ----~~~~~~~~~~~~~sr~~-~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~ 466 (891)
........+ ..++-+. ...++..+++.+..+++.++.++..++++++.+.|.+. +++++.
T Consensus 243 ~~~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 307 (396)
T 2ch1_A 243 LGNYWGCYDEPKR-YHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFV 307 (396)
T ss_dssp HHHHTTCSSSCCC-CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSS
T ss_pred HHHhhhhhcccCC-CCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeecc
Confidence 000000011 1122232 33556677887777889999999999999999999876 777664
No 62
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.46 E-value=1.6e-12 Score=142.99 Aligned_cols=171 Identities=16% Similarity=0.080 Sum_probs=113.6
Q ss_pred ccccc-CCCCCCHHHHHHHHHHHhcCCCC--C--ccccChhHHHHHHHHHHH-HHHHcCCCCCCCCCCCCCCCCCCCCCc
Q psy852 19 RFHAY-FPSGNSYPSVLADMLSDAIGCIG--F--SWAASPSCTELETIVLDW-LGKAIGLPEKFLMYPPQGKNATTPNDI 92 (891)
Q Consensus 19 ~~~~~-~~~~~~~~~~~~~~l~~~~n~~~--~--~~~~~p~~~~~E~~~~~~-l~~l~g~~~~~~~~~~~~~g~~tp~~~ 92 (891)
.|+++ .+.+...+.++..+....-+..+ . .+..+........++.++ +++++|.+ . .
T Consensus 10 i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~-~-v--------------- 72 (371)
T 2e7j_A 10 INIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD-V-A--------------- 72 (371)
T ss_dssp EECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS-E-E---------------
T ss_pred EEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC-E-E---------------
Confidence 36666 33455566666655544332210 0 122233334556667788 99999876 2 1
Q ss_pred cccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEe--
Q psy852 93 DMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILE-- 170 (891)
Q Consensus 93 ~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~-- 170 (891)
.+++||+......+..+ . . ++..|+++..+|++...++...|.+++.++
T Consensus 73 --------------~~~~g~t~a~~~~~~~~-~-~-------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 123 (371)
T 2e7j_A 73 --------------RVTNGAREAKFAVMHSL-A-K-------------KDAWVVMDENCHYSSYVAAERAGLNIALVPKT 123 (371)
T ss_dssp --------------EEESSHHHHHHHHHHHH-C-C-------------TTCEEEEETTCCHHHHHHHHHTTCEEEEECCC
T ss_pred --------------EEeCChHHHHHHHHHHH-h-C-------------CCCEEEEccCcchHHHHHHHHcCCeEEEeecc
Confidence 13467664332222222 1 1 123488889999999999888888999999
Q ss_pred cCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccC
Q psy852 171 PDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 171 ~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG 236 (891)
.|+++.+|+++|++.+++...+ ..+.+|+++..+|.+|.+.|+++|.++|+++|+++++|+|+++
T Consensus 124 ~~~~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~ 188 (371)
T 2e7j_A 124 DYPDYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAI 188 (371)
T ss_dssp CTTTCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTB
T ss_pred cCCCCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECcccc
Confidence 8888999999999999854321 2356899999999999999999999999999999999999854
No 63
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.46 E-value=2.6e-12 Score=139.65 Aligned_cols=277 Identities=10% Similarity=0.023 Sum_probs=177.2
Q ss_pred HHHHHHHHhhccC-CccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHH--HHHH
Q psy852 447 ELAKLFEGKVRRD-PRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCV--EKAA 523 (891)
Q Consensus 447 elAr~l~~~L~~~-~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv--~Kaa 523 (891)
++.+.+++.+... +.-+++ +++|+++++..++.+... -.|+++..+|++. .+++
T Consensus 37 ~l~~~la~~~g~~~~~~~v~--~t~g~t~a~~~~~~~~~~---------------------d~vl~~~~~~~~~~~~~~~ 93 (353)
T 2yrr_A 37 AIQERLAALFDPGEGALVAA--LAGSGSLGMEAGLANLDR---------------------GPVLVLVNGAFSQRVAEMA 93 (353)
T ss_dssp HHHHHHHHHHCCCTTCEEEE--ESSCHHHHHHHHHHTCSC---------------------CCEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCceEE--EcCCcHHHHHHHHHHhcC---------------------CcEEEEcCCCchHHHHHHH
Confidence 4444556666542 122466 778999999888765421 1267777788874 4555
Q ss_pred HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCC--------
Q psy852 524 MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGI-------- 579 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi-------- 579 (891)
...|.+++.+|.++++.+|+++|+++|++. ....++++ +..|... |+++ +|++
T Consensus 94 ~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~ 170 (353)
T 2yrr_A 94 ALHGLDPEVLDFPPGEPVDPEAVARALKRR---RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPF 170 (353)
T ss_dssp HHTTCCEEEEECCTTSCCCHHHHHHHHHHS---CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCC
T ss_pred HHcCCceEEEeCCCCCCCCHHHHHHHHHhC---CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccc
Confidence 677899999999999999999999999862 11122222 2235443 4431 2221
Q ss_pred ----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCC-CccccCCCCCccccCCccccccc-ccchHHHHHHHH
Q psy852 580 ----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDP-LYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRT 653 (891)
Q Consensus 580 ----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~-~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~ 653 (891)
-.+|.+++++|||+++|.|+|+++++++. + +.+...+ .|+........ .......++.. .....++.+++.
T Consensus 171 ~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~-~-~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~al~~ 247 (353)
T 2yrr_A 171 SMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEA-R-KAFTGKRGWYLDLARVAEH-WERGGYHHTTPVLLHYALLEALDL 247 (353)
T ss_dssp CHHHHTCSEEECCTTSTTCCCSSCEEEEECHHH-H-HHCCCCSCSTTCHHHHHHH-HTTCCCSSCCCHHHHHHHHHHHHH
T ss_pred cccccCceEEEecCcccccCCCceEEEEECHHH-H-HHhccCCCccccHHHHhhh-hhcCCCCCCCCHHHHHHHHHHHHH
Confidence 13699999999999999999999997652 2 2221101 11100000000 00000111111 222345667777
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC--ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecccc
Q psy852 654 YGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV--RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQE 731 (891)
Q Consensus 654 lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~--~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~ 731 (891)
+...|+++..++..++++++.+.|++. ++++..++ ...+++|+++.. ...+++.+.|.++|+.+..+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~gi~v~~g~~~~ 320 (353)
T 2yrr_A 248 VLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEG------VDADRLVRALYAEGVAVAGGIGPT 320 (353)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTT------CCHHHHHHHHHHTTEECEECCGGG
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCC------CCHHHHHHHHHHCCEEEeCCcccc
Confidence 777789999999999999999999987 88887643 345778988421 135678889988998765554443
Q ss_pred CCeEE-EEecCCCCHHHHH-HHHHHHHHHH
Q psy852 732 QNDEV-FELQERKRKDDLA-YKRSFFVRML 759 (891)
Q Consensus 732 g~~~l-~sv~~~tT~edId-~li~~L~ei~ 759 (891)
....+ ++++..++++|++ ++++.|+++.
T Consensus 321 ~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l 350 (353)
T 2yrr_A 321 RGQVLRLGLMGEGARREAYQAFLKALDRAL 350 (353)
T ss_dssp TTTCEEEECSGGGSCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 44556 9987777889998 9999998775
No 64
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.45 E-value=9.5e-13 Score=146.93 Aligned_cols=251 Identities=9% Similarity=-0.031 Sum_probs=162.7
Q ss_pred cccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcc
Q psy852 49 WAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQK 128 (891)
Q Consensus 49 ~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~ 128 (891)
+..++.+.++-.++.+.+++++|.+... .+++|||...++. +.+.+ .
T Consensus 27 ~h~~~~~~~~~~~~~~~l~~~~~~~~~v------------------------------~~~~sgt~a~~~~-~~~~~--~ 73 (379)
T 3ke3_A 27 NHMSKAFQEVMNDLLSNLKTVYNAEAAV------------------------------IIPGSGTYGMEAV-ARQLT--I 73 (379)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHTCSEEE------------------------------EEESCHHHHHHHH-HHHHC--T
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCEE------------------------------EEcCChhHHHHHH-HHhCC--C
Confidence 3458888899999999999999986221 1457887654443 22211 1
Q ss_pred ccCCccccccccCCeEEEecCCCChHHH--HHHHH-c-CCeEEEEecCCC---------CcccHHHHHHHHHhhhhcCCc
Q psy852 129 KIHPFVDEGVLLSKLMAYCSKEAHSCVE--KAAMM-A-FVRLKILEPDDK---------NSLRGATLRQVMQQDETMGYI 195 (891)
Q Consensus 129 ~~~~~~~~g~~~~~~~v~~S~~~H~Sv~--kaa~~-~-~~~v~~V~~d~~---------g~id~~~L~~~l~~~~~~g~~ 195 (891)
+-.|+++..+|++.. ..+.. + +.+++.++++.. +.+|+++|++.+++..
T Consensus 74 -------------gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~----- 135 (379)
T 3ke3_A 74 -------------DEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK----- 135 (379)
T ss_dssp -------------TCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----
T ss_pred -------------CCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----
Confidence 112566667777643 22332 3 347888887543 3699999999996532
Q ss_pred ceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcch
Q psy852 196 PFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASE 272 (891)
Q Consensus 196 p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~ 272 (891)
+.+|+++..+|.+|.+.| +++|+++|+++|+++|+|++++|...+.
T Consensus 136 ~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~g~~~~~------------------------------- 184 (379)
T 3ke3_A 136 SAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIASGCVWLD------------------------------- 184 (379)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTCTTCCCC-------------------------------
T ss_pred CcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc-------------------------------
Confidence 347888999999999999 9999999999999999999885311110
Q ss_pred hHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCcccc
Q psy852 273 CIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFR 352 (891)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 352 (891)
..
T Consensus 185 ------------------------------------------------------------------------------~~ 186 (379)
T 3ke3_A 185 ------------------------------------------------------------------------------MK 186 (379)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred ccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcc--cCccccCCCCC-----CcccccccccCCCCCh-hHH
Q psy852 353 PFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV--VDPLYLQHGHE-----GAIDYRHWGIPLSRRF-RSL 424 (891)
Q Consensus 353 ~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~--~~~~y~~~~~~-----~~~~~~~~~~~~sr~~-~~l 424 (891)
. ..+|.+++++|||+++|.+.|++++++... ..+. ....|...... +.+..+.....++-+. ...
T Consensus 187 ~-----~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~ 259 (379)
T 3ke3_A 187 E-----LGIDVLISAPQKGWSSTPCAGLVMLSAAAI--KKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLR 259 (379)
T ss_dssp H-----HTCSEEEECTTTTTCSCCCEEEEEECHHHH--HHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHH
T ss_pred c-----cCCCEEEecchhhcCCCCceEEEEECHHHH--HhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHH
Confidence 0 036999999999999999999999986521 1111 11122110000 0000000001112222 233
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccccC
Q psy852 425 KLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND 467 (891)
Q Consensus 425 ~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~ 467 (891)
++-.+++.+..+|+.++.++..++++++.+.|.+. +++++.+
T Consensus 260 a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~ 301 (379)
T 3ke3_A 260 QFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAA 301 (379)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBC
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCC
Confidence 55577788888899999999999999999999886 6777654
No 65
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.45 E-value=2.5e-12 Score=141.85 Aligned_cols=251 Identities=12% Similarity=0.016 Sum_probs=159.3
Q ss_pred cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc
Q psy852 51 ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI 130 (891)
Q Consensus 51 ~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~ 130 (891)
.+|...++..++.+++++++|.+.... .+| +++||+...+..+..+ . ..
T Consensus 46 ~~~~~~~~~~~~~~~la~~~g~~~~~~-------~i~--------------------~~~ggt~al~~~~~~~-~-~~-- 94 (376)
T 3f0h_A 46 RTTEFSSTMLENEKFMLEYAKAPEGSK-------AVF--------------------MTCSSTGSMEAVVMNC-F-TK-- 94 (376)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTCCTTCE-------EEE--------------------ESSCHHHHHHHHHHHH-C-CT--
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCce-------EEE--------------------EcCChhHHHHHHHHhc-c-CC--
Confidence 356777888899999999999975310 011 2467765433332222 1 11
Q ss_pred CCccccccccCCeEEEecCCCChHHH--HHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc
Q psy852 131 HPFVDEGVLLSKLMAYCSKEAHSCVE--KAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC 208 (891)
Q Consensus 131 ~~~~~~g~~~~~~~v~~S~~~H~Sv~--kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~ 208 (891)
.+- |+++...+++.. ..+...+.+++.++++.++.+|+++|++.++++ +.+|+++..+|.+
T Consensus 95 ----------gd~-vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~------~~~v~~~~~~npt 157 (376)
T 3f0h_A 95 ----------KDK-VLVIDGGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQN------FTGLLVNVDETST 157 (376)
T ss_dssp ----------TCC-EEEEESSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSC------CCEEEEESEETTT
T ss_pred ----------CCe-EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccC------ceEEEEecccCCc
Confidence 112 444444444432 234456789999999999999999999866433 4578888899999
Q ss_pred ccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhh
Q psy852 209 CSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISK 288 (891)
Q Consensus 209 GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 288 (891)
|.+.|+++|+++|+++|+++++|+++++....
T Consensus 158 G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~------------------------------------------------ 189 (376)
T 3f0h_A 158 AVLYDTMMIGEFCKKNNMFFVCDCVSAFLADP------------------------------------------------ 189 (376)
T ss_dssp TEECCHHHHHHHHHHTTCEEEEECTTTTTTSC------------------------------------------------
T ss_pred ceecCHHHHHHHHHHcCCEEEEEcCccccCcc------------------------------------------------
Confidence 99999999999999999999999888432110
Q ss_pred hcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeC
Q psy852 289 LKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNV 368 (891)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~ 368 (891)
..+.. ..+|.++.++
T Consensus 190 ------------------------------------------------------------~~~~~-----~~~d~~~~s~ 204 (376)
T 3f0h_A 190 ------------------------------------------------------------FNMNE-----CGADVMITGS 204 (376)
T ss_dssp ------------------------------------------------------------CCHHH-----HTCSEEEEET
T ss_pred ------------------------------------------------------------ccccc-----cCccEEEecC
Confidence 00000 0258999999
Q ss_pred CCcCCccCCceEEEEeccccchhhcc--cCcc-ccCCCCCCcccccccccCCCCChh-HHHHHHHHHHhcHH-HHHHHHH
Q psy852 369 NKWLLTAFDSSCLWVADRYKLTSALV--VDPL-YLQHGHEGAIDYRHWGIPLSRRFR-SLKLWFVIRTYGLS-GLQKYIR 443 (891)
Q Consensus 369 HK~~~~p~~~g~~~~r~~~~~~~~~~--~~~~-y~~~~~~~~~~~~~~~~~~sr~~~-~l~~w~~l~~~g~~-G~~~ii~ 443 (891)
||++.+|.+.|++++++... ..+. ..+. |+..... .......+...+-... ..++..+++.+... |+.++.+
T Consensus 205 ~K~l~~~~G~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 281 (376)
T 3f0h_A 205 QKVLACPPGISVIVLAPRGV--ERVEKSKVRTMYFDLKDA-LKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVA 281 (376)
T ss_dssp TTTTCCCSSCEEEEECHHHH--HHHHTCCCCCSTTCHHHH-HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred cccccCCCceEEEEECHHHH--HHhhcCCCCceeecHHHH-HhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 99998899999988876421 1111 1111 1110000 0000000111122222 25667778877777 7999999
Q ss_pred HHHHHHHHHHHhhccCCcccccc
Q psy852 444 RHCELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 444 ~~lelAr~l~~~L~~~~~~eVv~ 466 (891)
+..++++++.+.|.+. +++++.
T Consensus 282 ~~~~~~~~l~~~L~~~-~~~~~~ 303 (376)
T 3f0h_A 282 RIASQAADFRAKIKDL-PFELVS 303 (376)
T ss_dssp HHHHHHHHHHHHTTTS-SEEECC
T ss_pred HHHHHHHHHHHHHHHc-CCccCc
Confidence 9999999999999876 466654
No 66
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.45 E-value=1.3e-12 Score=146.96 Aligned_cols=285 Identities=11% Similarity=0.022 Sum_probs=173.0
Q ss_pred HHHHHHHH-HHHHhhccCCccccccCC-CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHH
Q psy852 443 RRHCELAK-LFEGKVRRDPRFEISNDV-RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVE 520 (891)
Q Consensus 443 ~~~lelAr-~l~~~L~~~~~~eVv~~i-tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~ 520 (891)
.+.++.++ .+++.+...+..+|+ + |+|+|+++..++... .... .| + .+.+....|++.
T Consensus 57 ~~~~~~ar~~la~ll~~~~~~evi--f~t~~~T~a~n~a~~~l----~~~~--------~G----d-~v~~~~~g~~~~- 116 (377)
T 3e77_A 57 AKIINNTENLVRELLAVPDNYKVI--FLQGGGCGQFSAVPLNL----IGLK--------AG----R-CADYVVTGAWSA- 116 (377)
T ss_dssp HHHHHHHHHHHHHHHTCCTTEEEE--EESSHHHHHHHHHHHHH----GGGS--------TT----C-EEEECCCSHHHH-
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEE--EEcCchHHHHHHHHHhc----cCCC--------CC----C-eEEEEECCHHHH-
Confidence 34445555 556666654446788 6 689999988777643 1110 00 1 233344445442
Q ss_pred HHHHH---cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec--CCccc---hhh-----hhcCC--------
Q psy852 521 KAAMM---AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT--LGTTS---CYR-----KSQGI-------- 579 (891)
Q Consensus 521 Kaa~l---~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat--aGTT~---c~~-----~ldGi-------- 579 (891)
+++.+ .|..++.+|+|.++..+++.++.+++++++ ...++.++ .|+.. |.+ ++|++
T Consensus 117 ~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~---lV~~~h~et~tG~~~pii~~~~~~~~~vD~~q~~g~~~i 193 (377)
T 3e77_A 117 KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDAS---YVYYCANETVHGVEFDFIPDVKGAVLVCDMSSNFLSKPV 193 (377)
T ss_dssp HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCS---CEEEESEETTTTEECSSCCCCTTCCEEEECTTTTTSSCC
T ss_pred HHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCcc---EEEEeCccCchheEchhhhccCCCEEEEEcccccCCCCC
Confidence 33332 466777889887778888887766655432 22333332 36654 433 34543
Q ss_pred --CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccchHHHHHHHHHHH
Q psy852 580 --EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRTYGL 656 (891)
Q Consensus 580 --~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~lG~ 656 (891)
+..|-+++++|||++ |.|+|++++|++.. ...-...+.|+.-... .......++-. +..+.+-.+++.+-.
T Consensus 194 d~~~~~~~~~s~~K~~g-p~G~g~l~~~~~~l-~~~~~~~p~~~~~~~~----~~~~~~~~Tp~v~~i~~l~~al~~l~~ 267 (377)
T 3e77_A 194 DVSKFGVIFAGAQKNVG-SAGVTVVIVRDDLL-GFALRECPSVLEYKVQ----AGNSSLYNTPPCFSIYVMGLVLEWIKN 267 (377)
T ss_dssp CGGGCSEEEEEGGGTTS-CTTCEEEEEETTSC-SCCCTTSCGGGCHHHH----HTTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred chhhcCEEEEecccccC-CCccEEEEEcHHHH-hhccCCCCchhhHHHH----hhcCCCCCCchHHHHHHHHHHHHHHHH
Confidence 223678999999995 99999999998742 1110111223210000 00000001111 123456677777777
Q ss_pred h-hHHHHHHHHHHHHHHHHHHhccCCCcEEeC-CC--ce-eEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecccc
Q psy852 657 S-GLQKYIRRHCELAKLFEGKVRRDPRFEISN-DV--RL-GLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQE 731 (891)
Q Consensus 657 ~-G~~~~i~~~~~lA~~L~~~L~~~~~~eil~-~~--~~-~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~ 731 (891)
. |++++.++..+++++|.++|++++++++.. ++ .+ .+|+|++++...+ ..+...+++.|.+.|+....+-..
T Consensus 268 ~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~--~~~~~~~l~~l~~~Gi~~~~g~~~- 344 (377)
T 3e77_A 268 NGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGD--DALEKRFLDKALELNMLSLKGHRS- 344 (377)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCC--HHHHHHHHHHHHHTTEESCBCCTT-
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCc--hhHHHHHHHHHHHCCcEEeCCCCc-
Confidence 7 899999999999999999999999998643 22 33 4799999864220 112246778888889874333222
Q ss_pred CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
...+ +|+++++|++|||+++++|+++.+
T Consensus 345 -~g~iRiS~~~~~t~edId~l~~al~~~~~ 373 (377)
T 3e77_A 345 -VGGIRASLYNAVTIEDVQKLAAFMKKFLE 373 (377)
T ss_dssp -TCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 2336 999999999999999999998763
No 67
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.44 E-value=2.5e-12 Score=147.34 Aligned_cols=279 Identities=11% Similarity=0.087 Sum_probs=181.2
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHH----HH
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK----AA 523 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~K----aa 523 (891)
+.+.+++.+...++ +|+ +++|+++++..++.+... . | ..+..|+++..+|++... .+
T Consensus 116 l~~~la~~~g~~~~-~v~--~t~g~t~al~~~~~~~~~----~----------~--~~~~~Vl~~~~~~~s~~~~~~~~~ 176 (465)
T 3e9k_A 116 IVGLMKDIVGANEK-EIA--LMNALTVNLHLLMLSFFK----P----------T--PKRYKILLEAKAFPSDHYAIESQL 176 (465)
T ss_dssp HHGGGHHHHTCCGG-GEE--ECSCHHHHHHHHHHHHCC----C----------C--SSSCEEEEETTCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcC-CEE--EECCHHHHHHHHHHHhcc----c----------c--CCCCEEEEcCCcCCchHHHHHHHH
Confidence 34556666665444 566 678888888877665411 0 0 123468899999987444 55
Q ss_pred HHcCce-----EEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCC---
Q psy852 524 MMAFVR-----LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGI--- 579 (891)
Q Consensus 524 ~l~gv~-----v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi--- 579 (891)
...|.+ +..+|.+.++.+|+++|+++|++... ....++++. ..|+.. |+++ +|++
T Consensus 177 ~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~-~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~ 255 (465)
T 3e9k_A 177 QLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGD-SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAV 255 (465)
T ss_dssp HHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGG-GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred HHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCC-CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhc
Confidence 556654 45667888899999999999985421 111223332 345544 4442 3432
Q ss_pred ---------CCccEEEEcCcccC-CcccccEEEEEeCCccchhhhc-cCCCccccCC--------CCCccccCCcccccc
Q psy852 580 ---------EYADSFNVNVNKWL-LTAFDSSCLWVADRYKLTSALV-VDPLYLQHGH--------EGAIDYRHWGIPLSR 640 (891)
Q Consensus 580 ---------~~aDSIs~d~HK~L-~~P~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~--------e~~~~~~~~ti~~SR 640 (891)
..+|.+++++|||+ ++|.++|+++++++. + +.+. ....|..+.. ...+......++.+.
T Consensus 256 g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 333 (465)
T 3e9k_A 256 GNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKH-A-HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISN 333 (465)
T ss_dssp TTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGG-T-TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSC
T ss_pred CCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHHH-H-hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCC
Confidence 14799999999999 489999999997652 1 1111 1112211100 000000001111112
Q ss_pred c--ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC----------CCcEEeCCCc----eeEEEEEecCCcch
Q psy852 641 R--FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD----------PRFEISNDVR----LGLVCFRLRSENNL 704 (891)
Q Consensus 641 r--~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~----------~~~eil~~~~----~~iV~Fr~~~~~~~ 704 (891)
+ ...+.++.++..+...+++++.++..++++++.+.|++. ++++++.+.+ .++++|++. .
T Consensus 334 ~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~-~--- 409 (465)
T 3e9k_A 334 PPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS-V--- 409 (465)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC-C---
T ss_pred ccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec-C---
Confidence 1 235678888888888899999999999999999999885 7899987642 678999985 2
Q ss_pred hhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 705 IADQNNRKLLEDINASGRLHMVPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 705 ~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
....+.+.|.++|++.. ..+..++ +++ +.++|++||++++++|+++..
T Consensus 410 ----~~~~l~~~L~~~Gi~v~----~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~ 459 (465)
T 3e9k_A 410 ----PNKDVFQELEKRGVVCD----KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILD 459 (465)
T ss_dssp ----TTCCHHHHHHTTTEECE----EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHT
T ss_pred ----CHHHHHHHHHHCCEEEe----cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHH
Confidence 23467888889998743 3445677 998 789999999999999998763
No 68
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.43 E-value=9.2e-12 Score=138.34 Aligned_cols=279 Identities=11% Similarity=0.027 Sum_probs=181.0
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH--HHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S--v~Kaa~ 524 (891)
++++++++.+...+..+++ +++|+++++..++.++.. +.-.|+++..+|++ +..++.
T Consensus 71 ~~~~~la~~~g~~~~~~v~--~t~g~t~al~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~ 129 (393)
T 1vjo_A 71 EIQSLLRYVWQTENPLTIA--VSGTGTAAMEATIANAVE-------------------PGDVVLIGVAGYFGNRLVDMAG 129 (393)
T ss_dssp HHHHHHHHHHTCCCSCEEE--ESSCHHHHHHHHHHHHCC-------------------TTCEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEE--EeCchHHHHHHHHHhccC-------------------CCCEEEEEcCChhHHHHHHHHH
Confidence 4455666666543332466 788999999988877521 11247777888888 888888
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCC---------
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGI--------- 579 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi--------- 579 (891)
..|.+++.+|.+.++.+|+++|+++|++. ....+++. +..|... |.++ +|.+
T Consensus 130 ~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~ 206 (393)
T 1vjo_A 130 RYGADVRTISKPWGEVFSLEELRTALETH---RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIF 206 (393)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHH---CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC
T ss_pred HcCCceEEEecCCCCCCCHHHHHHHHhhC---CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCc
Confidence 88999999999999999999999999863 11122232 2245443 4432 2322
Q ss_pred ---CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-----CCCccccCCCCCccccCCcccc-cc-cccchHHHH
Q psy852 580 ---EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-----DPLYLQHGHEGAIDYRHWGIPL-SR-RFRSLKLWF 649 (891)
Q Consensus 580 ---~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-----~~~Yl~~~~e~~~~~~~~ti~~-SR-r~~aL~lW~ 649 (891)
..+|.++.++|||+++|.++|+++++++ +.+.+.. ...|........+ ........ +- ......++.
T Consensus 207 ~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~a~~~ 283 (393)
T 1vjo_A 207 LDAWGVDLAYSCSQKGLGCSPGASPFTMSSR--AIEKLQRRRTKVANWYLDMNLLGKY-WGSERVYHHTAPINLYYALRE 283 (393)
T ss_dssp TTTTTCSEEECCSSSTTCSCSSCEEEEECHH--HHHHHHTCSSCCSCSTTCHHHHHHH-HSTTCCCCSCCCHHHHHHHHH
T ss_pred ccccCccEEEEcCcccccCCCceEEEEECHH--HHHHHhccCCCCCceecCcHhhhhh-hccCCCCCCCCCHHHHHHHHH
Confidence 1369999999999999999999999765 2222211 0111100000000 00000111 11 122345566
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc---eeEEEEEecCCcchhhhhhHHHHHHHHHhC-CcEEE
Q psy852 650 VIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR---LGLVCFRLRSENNLIADQNNRKLLEDINAS-GRLHM 725 (891)
Q Consensus 650 ~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~---~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~~~ 725 (891)
+++.+...++++..++..++++++.+.|++. +++++.+.. .++++|+++.. .....+.+.|.++ |+.+.
T Consensus 284 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~gi~v~ 356 (393)
T 1vjo_A 284 ALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIPDG------VDGKAVARRLLNEHNIEVG 356 (393)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCTT------CCHHHHHHHHHHHHCEECE
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcCCC------CCHHHHHHHHHhhCCEEEe
Confidence 6776666678899999999999999999987 788766532 36888888421 1356788889887 98866
Q ss_pred eeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHH
Q psy852 726 VPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 726 s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~ 759 (891)
.+........+ +++ ...+++++++++++.|++++
T Consensus 357 ~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 357 GGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred cCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 55544455667 884 55678889999999998764
No 69
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.43 E-value=2.6e-12 Score=156.69 Aligned_cols=203 Identities=16% Similarity=0.140 Sum_probs=141.7
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCC-----Ccc-----cHHHHHHHHHhh--h--hcCCcceEEEeecccCccc
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-----NSL-----RGATLRQVMQQD--E--TMGYIPFFVSTTLGTTSCC 209 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~-----g~i-----d~~~L~~~l~~~--~--~~g~~p~~V~~t~Gtt~~G 209 (891)
.|+++..+|+|+..++.+.|.++++++++.+ |.| |+++|+++|++. + +.+..|.+|+++.. |.+|
T Consensus 247 ~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G 325 (755)
T 2vyc_A 247 VVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDG 325 (755)
T ss_dssp EEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTS
T ss_pred EEEECCCchHHHHHHHHHcCCEEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCc
Confidence 4888999999999999877889999988643 456 999999999863 2 24666767777776 5799
Q ss_pred cccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhh
Q psy852 210 SFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKL 289 (891)
Q Consensus 210 avDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 289 (891)
.+.|+++|+++|++++++||+|+|||+.+.+.+.+++ +
T Consensus 326 ~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~---------------~--------------------------- 363 (755)
T 2vyc_A 326 VCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD---------------H--------------------------- 363 (755)
T ss_dssp EEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTT---------------S---------------------------
T ss_pred eecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCC---------------c---------------------------
Confidence 9999999999999999999999999765433221100 0
Q ss_pred cccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccE------
Q psy852 290 KKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADS------ 363 (891)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds------ 363 (891)
.. +.+ +.+|.
T Consensus 364 --------------------------------------------------------------~~-~~g-~~aD~~~~~~i 379 (755)
T 2vyc_A 364 --------------------------------------------------------------YA-MRG-EPGDHNGPTVF 379 (755)
T ss_dssp --------------------------------------------------------------SS-SCS-CCCCCSSBEEE
T ss_pred --------------------------------------------------------------ch-hcC-CcCCccCCCeE
Confidence 00 000 01243
Q ss_pred EEEeCCCcCCccCCceEEEEeccc-cc-hhhcccCccccCCCCCCcccccccccCCCCCh-hHHHHHHHHHHhcHHHHHH
Q psy852 364 FNVNVNKWLLTAFDSSCLWVADRY-KL-TSALVVDPLYLQHGHEGAIDYRHWGIPLSRRF-RSLKLWFVIRTYGLSGLQK 440 (891)
Q Consensus 364 ~~~~~HK~~~~p~~~g~~~~r~~~-~~-~~~~~~~~~y~~~~~~~~~~~~~~~~~~sr~~-~~l~~w~~l~~~g~~G~~~ 440 (891)
++.++||++.+|.++|++++++.. .+ ...+......++ .+|-.. ...++-.+++.+..+|..+
T Consensus 380 v~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~--------------s~sp~~~~iaal~aA~~~l~~~gg~~ 445 (755)
T 2vyc_A 380 ATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHA--------------TTSPLYAICASNDVAVSMMDGNSGLS 445 (755)
T ss_dssp EEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHTS--------------CSSCCHHHHHHHHHHHHHHSTHHHHH
T ss_pred EEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHhC--------------CCCHHHHHHHHHHHHHHHHHhhhHHH
Confidence 899999999999889999998751 01 000000000000 011111 2345556777777777788
Q ss_pred HHHHHHHHHHHHHHhhccCCc---------cccccC
Q psy852 441 YIRRHCELAKLFEGKVRRDPR---------FEISND 467 (891)
Q Consensus 441 ii~~~lelAr~l~~~L~~~~~---------~eVv~~ 467 (891)
++++.+++++++++.|+++++ |+++++
T Consensus 446 ~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~ 481 (755)
T 2vyc_A 446 LTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNK 481 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSC
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccceeeccCc
Confidence 999999999999999998877 888875
No 70
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.42 E-value=4.6e-12 Score=138.21 Aligned_cols=167 Identities=17% Similarity=0.124 Sum_probs=114.4
Q ss_pred ccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccccccc
Q psy852 20 FHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDY 99 (891)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~ 99 (891)
|+++-..+...|.++..+..... . |..+....++...+.+++++++|.+....
T Consensus 17 ~l~~~~~~~~~~~v~~a~~~~~~-~----~~~~~g~~~~~~~~~~~l~~~~g~~~~~v---------------------- 69 (359)
T 1svv_A 17 SFVNDYSVGMHPKILDLMARDNM-T----QHAGYGQDSHCAKAARLIGELLERPDADV---------------------- 69 (359)
T ss_dssp ECSCSCSSCCCHHHHHHHHHHTT-C----CCCSTTCSHHHHHHHHHHHHHHTCTTSEE----------------------
T ss_pred EecCCCcCCCCHHHHHHHHHHHh-h----ccccccccHHHHHHHHHHHHHhCCCCccE----------------------
Confidence 55554444555666665555442 2 22223345778889999999999654311
Q ss_pred CCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHH--HHHcCCeEEEEecCCCCcc
Q psy852 100 MTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA--AMMAFVRLKILEPDDKNSL 177 (891)
Q Consensus 100 ~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~ka--a~~~~~~v~~V~~d~~g~i 177 (891)
.+++||+.. +...+..++. +...|+++..+|++...+ +...|.+++.++.+ ++.+
T Consensus 70 -------~~~~g~t~a-~~~~~~~~~~--------------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~ 126 (359)
T 1svv_A 70 -------HFISGGTQT-NLIACSLALR--------------PWEAVIATQLGHISTHETGAIEATGHKVVTAPCP-DGKL 126 (359)
T ss_dssp -------EEESCHHHH-HHHHHHHHCC--------------TTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT-TSCC
T ss_pred -------EEeCCchHH-HHHHHHHHhC--------------CCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC-CCee
Confidence 135677654 3333322221 122488889999999884 56667899999987 7899
Q ss_pred cHHHHHHHHHhhh-hcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCC
Q psy852 178 RGATLRQVMQQDE-TMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 178 d~~~L~~~l~~~~-~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
|+++|++.+++.. +.+..+.+|+++.. |.+|.+.| +++|+++|+++|+++|+|.+++++
T Consensus 127 d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 189 (359)
T 1svv_A 127 RVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLAS 189 (359)
T ss_dssp CHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHH
T ss_pred cHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhh
Confidence 9999999998651 23334567777766 57999998 999999999999999999999544
No 71
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.42 E-value=1.5e-11 Score=136.38 Aligned_cols=280 Identities=11% Similarity=0.039 Sum_probs=173.2
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHH--HHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCV--EKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv--~Kaa~ 524 (891)
++.+.+++.+...+..+++ +++|+++++..++.++.. +.-.|+++..+|++. .+.+.
T Consensus 56 ~l~~~la~~~g~~~~~~i~--~~~g~t~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~ 114 (393)
T 2huf_A 56 DIKEGVRYLFQTNNIATFC--LSASGHGGMEATLCNLLE-------------------DGDVILIGHTGHWGDRSADMAT 114 (393)
T ss_dssp HHHHHHHHHHTCCCSEEEE--ESSCHHHHHHHHHHHHCC-------------------TTCEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEE--EcCcHHHHHHHHHHHHhC-------------------CCCEEEEECCCcchHHHHHHHH
Confidence 3444555555543333565 678999999988876511 112477777888874 23334
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcC----------
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQG---------- 578 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldG---------- 578 (891)
..|.+++.+|.++++.+|+++|+++|++. ....++++ +..|... |.++ +|+
T Consensus 115 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~---~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 191 (393)
T 2huf_A 115 RYGADVRVVKSKVGQSLSLDEIRDALLIH---KPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF 191 (393)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHH---CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC
T ss_pred HcCCeeEEEeCCCCCCCCHHHHHHHHhcc---CCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc
Confidence 46889999999988999999999999862 11122222 2345543 4431 221
Q ss_pred C--CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccC----CCccccCC-----CCCccccCCcccccccc-cchH
Q psy852 579 I--EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD----PLYLQHGH-----EGAIDYRHWGIPLSRRF-RSLK 646 (891)
Q Consensus 579 i--~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~----~~Yl~~~~-----e~~~~~~~~ti~~SRr~-~aL~ 646 (891)
+ ..+|.+++++|||+++|.|+|+++++++ +.+.+... ..|..... ........+. .++-.. ....
T Consensus 192 ~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a 268 (393)
T 2huf_A 192 MDRWEIDAMYTGSQKVLGAPPGITPVSFSHR--AVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIY-HHTISSTLLYG 268 (393)
T ss_dssp TTTTTCSEEECCSSSTTCCCSSCEEEEECHH--HHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCC-SCCCCHHHHHH
T ss_pred hhhcCccEEEECCCcccccCCCeEEEEECHH--HHHHHhhcCCCCceEEEchHHHHhhhccccccCCC-CCCCCHHHHHH
Confidence 1 1379999999999999999999998743 22222211 12110000 0000000000 011111 1233
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC--ce-eEEEEEecCCcchhhhhhHHHHHHHHHhC-Cc
Q psy852 647 LWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV--RL-GLVCFRLRSENNLIADQNNRKLLEDINAS-GR 722 (891)
Q Consensus 647 lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~--~~-~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~ 722 (891)
+..+++.+...++.+..++..++++++.+.|++. +++++.++ .. .+++|+++.. ...+++.+.|.++ |+
T Consensus 269 ~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~~~~gi 341 (393)
T 2huf_A 269 LREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQG------VDWLKAAQYAMKTYLV 341 (393)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTT------CCHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcCCC------CCHHHHHHHHHHhCCE
Confidence 4446666656678889999999999999999987 78776553 23 3888888521 1346788888764 88
Q ss_pred EEEeeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 723 LHMVPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 723 ~~~s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
.+..+....+...+ +++ ++.++++|++++++.|++++.
T Consensus 342 ~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~ 381 (393)
T 2huf_A 342 EISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVA 381 (393)
T ss_dssp ECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred EEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHH
Confidence 75444433345567 998 546789999999999998863
No 72
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.42 E-value=1.5e-11 Score=136.48 Aligned_cols=279 Identities=12% Similarity=0.026 Sum_probs=175.9
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHH--HHHHH
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVE--KAAMM 525 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~--Kaa~l 525 (891)
+.+.+++.+...+. +++ +++|+++++..++.++. . +.-.|+++..+|++.. +.+..
T Consensus 47 l~~~la~~~g~~~~-~v~--~t~g~t~a~~~~~~~~~----~---------------~gd~Vl~~~~~~~~~~~~~~~~~ 104 (392)
T 2z9v_A 47 VVDKAQKAMRLSNK-PVI--LHGEPVLGLEAAAASLI----S---------------PDDVVLNLASGVYGKGFGYWAKR 104 (392)
T ss_dssp HHHHHHHHTTCSSC-CEE--ESSCTHHHHHHHHHHHC----C---------------TTCCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCC-EEE--EeCCchHHHHHHHHHhc----C---------------CCCEEEEecCCcccHHHHHHHHH
Confidence 34455555554333 455 67899999998887651 0 1124788888888763 23344
Q ss_pred cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCC----------
Q psy852 526 AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGI---------- 579 (891)
Q Consensus 526 ~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi---------- 579 (891)
.|.+++.+|.++++.+|+++|+++|++... ...++++ +..|... |+++ +|++
T Consensus 105 ~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~--~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~ 182 (392)
T 2z9v_A 105 YSPHLLEIEVPYNEAIDPQAVADMLKAHPE--ITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHP 182 (392)
T ss_dssp HCSCEEEEECCTTSCCCHHHHHHHHHHCTT--CCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCG
T ss_pred cCCceEEeeCCCCCCCCHHHHHHHHhcCCC--CcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCccccc
Confidence 688999999999999999999999975211 1122222 2235443 4431 2221
Q ss_pred C--CccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-C--C--CccccCCC-CCccccCCccccccc-ccchHHHHH
Q psy852 580 E--YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-D--P--LYLQHGHE-GAIDYRHWGIPLSRR-FRSLKLWFV 650 (891)
Q Consensus 580 ~--~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~--~--~Yl~~~~e-~~~~~~~~ti~~SRr-~~aL~lW~~ 650 (891)
. .+|.+++++|||+++|.|+|+++++++. + +.+.. . + .|+.-... ..+.... ...++.. ...+.++.+
T Consensus 183 ~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~-~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~a 259 (392)
T 2z9v_A 183 EDCKADIYVTGPNKCLGAPPGLTMMGVSERA-W-AKMKANPLAPRASMLSIVDWENAWSRDK-PFPFTPSVSEINGLDVA 259 (392)
T ss_dssp GGGTCSEEEECSSSTTCCCSCCEEEEECHHH-H-HHHHTCTTSCCSSTTCSGGGTTTTSTTS-CCSSCCCHHHHHHHHHH
T ss_pred ccccceEEEecCcccccCCCceeEEEECHHH-H-HHhhhccCCCCceeccHHHHHhhhcccC-CCCCCCCHHHHHHHHHH
Confidence 1 3799999999999999999999997642 2 22211 0 1 11110000 0000000 0011111 112345667
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC----ceeEEEEEecCCcchhhhhhHHHHHHHHHhC-CcEEE
Q psy852 651 IRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV----RLGLVCFRLRSENNLIADQNNRKLLEDINAS-GRLHM 725 (891)
Q Consensus 651 L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~----~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~~~ 725 (891)
++.+...|+.+..++..++++++.+.|++. +++++.++ ..++++|+++.. ....++.+.|.++ |+.+.
T Consensus 260 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~~~gi~v~ 332 (392)
T 2z9v_A 260 LDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDG------VDEKALRQAARARYGVVFS 332 (392)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECCTT------CCHHHHHHHHHHHHCEECE
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECCCC------CCHHHHHHHHHhcCCEEEe
Confidence 777777778899999999999999999887 78877633 357888988421 1346788889887 98865
Q ss_pred eeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 726 VPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 726 s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
.+........+ +++ .+.+|++||+++++.|+++..
T Consensus 333 ~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 333 SGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp ECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHH
Confidence 55443445567 985 448899999999999998763
No 73
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.41 E-value=6.5e-12 Score=137.18 Aligned_cols=203 Identities=10% Similarity=0.036 Sum_probs=136.1
Q ss_pred EEEecCCCChHH-HHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCV-EKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv-~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
+++++...|.+. ..++...|.+++.++++.++.+|+++|++++++.. .+.+|+++..+|.+|.+.|+++|.++|+
T Consensus 83 vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~ 158 (366)
T 1m32_A 83 VLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAH 158 (366)
T ss_dssp EEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHH
Confidence 566777888774 45556667799999999999999999999998641 1457778888999999999999999999
Q ss_pred HcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHH
Q psy852 223 EFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLL 302 (891)
Q Consensus 223 ~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (891)
++|+++++|+|++....
T Consensus 159 ~~~~~li~Dea~~~~~~--------------------------------------------------------------- 175 (366)
T 1m32_A 159 RYGKTYIVDAMSSFGGI--------------------------------------------------------------- 175 (366)
T ss_dssp HHTCEEEEECTTTTTTS---------------------------------------------------------------
T ss_pred HcCCEEEEECCccccCc---------------------------------------------------------------
Confidence 99999999998842100
Q ss_pred HHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEE
Q psy852 303 SKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLW 382 (891)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~ 382 (891)
... +... .+|.++.++|||+++|.+.|+++
T Consensus 176 ---------------------------------------------~~~----~~~~-~~di~~~s~~K~~~~~~g~G~~~ 205 (366)
T 1m32_A 176 ---------------------------------------------PMD----IAAL-HIDYLISSANKCIQGVPGFAFVI 205 (366)
T ss_dssp ---------------------------------------------CCC----TTTT-TCSEEEEESSSTTCCCSSEEEEE
T ss_pred ---------------------------------------------Ccc----cccc-CccEEEecCcccccCCCceEEEE
Confidence 000 0000 25899999999999999999999
Q ss_pred Eeccccchhhccc-CccccCCCCCCccccccc--cc-CCCCCh-hHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHhh
Q psy852 383 VADRYKLTSALVV-DPLYLQHGHEGAIDYRHW--GI-PLSRRF-RSLKLWFVIRTYGLSG-LQKYIRRHCELAKLFEGKV 456 (891)
Q Consensus 383 ~r~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~--~~-~~sr~~-~~l~~w~~l~~~g~~G-~~~ii~~~lelAr~l~~~L 456 (891)
.++.. ...+.. ...|.... ...+..... +. .++-.. ...++..+++.+...| +.++.++..++++++.+.|
T Consensus 206 ~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L 282 (366)
T 1m32_A 206 AREQK--LAACKGHSRSLSLDL-YAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGM 282 (366)
T ss_dssp EEHHH--HTTCTTCCSCSTTCH-HHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred ECHHH--HHhhcCCCCCccccH-HHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHH
Confidence 98642 111211 11111100 000000000 00 112222 2345667777776666 8899999999999999999
Q ss_pred ccCCccccccC
Q psy852 457 RRDPRFEISND 467 (891)
Q Consensus 457 ~~~~~~eVv~~ 467 (891)
++. +++++.+
T Consensus 283 ~~~-~~~~~~~ 292 (366)
T 1m32_A 283 RAL-GFNTLLD 292 (366)
T ss_dssp HHT-TCCBSSC
T ss_pred HHC-CCeeccC
Confidence 886 6776643
No 74
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.41 E-value=4.3e-11 Score=134.25 Aligned_cols=269 Identities=14% Similarity=0.169 Sum_probs=171.6
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH--
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM-- 525 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l-- 525 (891)
+.+.+++.+...+. +++ +++|+++++..++.+++..+.+ +...|+++..+|++...++..
T Consensus 73 l~~~la~~~~~~~~-~v~--~~~ggt~a~~~a~~~l~~~~~~---------------~gd~Vl~~~~~~~~~~~~~~~~~ 134 (423)
T 3lvm_A 73 ARNQIADLVGADPR-EIV--FTSGATESDNLAIKGAANFYQK---------------KGKHIITSKTEHKAVLDTCRQLE 134 (423)
T ss_dssp HHHHHHHHHTCCGG-GEE--EESSHHHHHHHHHHHHHHHHTT---------------TCCEEEEETTSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCC-eEE--EeCChHHHHHHHHHHHHHhhcc---------------CCCEEEECCccchHHHHHHHHHH
Confidence 33455555554333 455 6889999999999887654321 123588999999999888754
Q ss_pred -cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe-----cCCccc--------hhhh-----hcCC-------
Q psy852 526 -AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST-----TLGTTS--------CYRK-----SQGI------- 579 (891)
Q Consensus 526 -~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva-----taGTT~--------c~~~-----ldGi------- 579 (891)
.|.+++.+|.++++.+|+++|+++|+++ +.+|+. ..|.+. |.++ +|.+
T Consensus 135 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~ 208 (423)
T 3lvm_A 135 REGFEVTYLAPQRNGIIDLKELEAAMRDD------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLP 208 (423)
T ss_dssp HTTCEEEEECCCTTSCCCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC
T ss_pred HcCCEEEEeccCCCCccCHHHHHHhcCCC------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC
Confidence 4889999999999999999999999763 223332 234443 4431 2211
Q ss_pred -----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccchHHHHHHHH
Q psy852 580 -----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRT 653 (891)
Q Consensus 580 -----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~ 653 (891)
..+|.+++++||+ ++|.|+|+++++++... . + .. ++..... . ..+. .++-. .....+..+++.
T Consensus 209 ~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~~~-~-~--~~-~~~~~~~-~---~~~~-~~~~~~~~~~a~~~al~~ 277 (423)
T 3lvm_A 209 IDLSQLKVDLMSFSGHKI-YGPKGIGALYVRRKPRV-R-I--EA-QMHGGGH-E---RGMR-SGTLPVHQIVGMGEAYRI 277 (423)
T ss_dssp CCTTTSCCSEEEEESTTT-TSCSSCEEEEECBTTBC-C-C--CC-SSCSSCT-T---TTTC-CSCCCHHHHHHHHHHHHH
T ss_pred cChhhcCCCEEEechHHh-cCCCCeEEEEEeccccC-C-C--Cc-cccCCcc-c---cccc-CCCCCHHHHHHHHHHHHH
Confidence 1379999999995 56888999999865211 1 1 11 1110000 0 0000 00111 112233344444
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc---eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 654 YGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR---LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 654 lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~---~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
+.. .+++..++..+++++|.+.|++++++++..++. .++++|++.+. ....+.+.|.+ +.+..+..+
T Consensus 278 ~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~--i~v~~g~~~ 347 (423)
T 3lvm_A 278 AKE-EMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYV-------EGESLIMALKD--LAVSSGSAC 347 (423)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTS-------CHHHHHHHTTT--EECBCCCC-
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCC-------CHHHHHHHHhh--heeccCccc
Confidence 333 378888999999999999999999999986654 46889998543 34566666655 222221111
Q ss_pred c-------------------CCeEE-EEecCCCCHHHHHHHHHHHHHHHHH
Q psy852 731 E-------------------QNDEV-FELQERKRKDDLAYKRSFFVRMLGL 761 (891)
Q Consensus 731 ~-------------------g~~~l-~sv~~~tT~edId~li~~L~ei~~~ 761 (891)
. ....+ ++++..+|++||+++++.|++++..
T Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~ 398 (423)
T 3lvm_A 348 TSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp ----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 0 02456 9999899999999999999998753
No 75
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.40 E-value=1.3e-12 Score=152.07 Aligned_cols=158 Identities=18% Similarity=0.156 Sum_probs=119.0
Q ss_pred HHHHHHHHHhhccC--CccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH
Q psy852 446 CELAKLFEGKVRRD--PRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA 523 (891)
Q Consensus 446 lelAr~l~~~L~~~--~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa 523 (891)
.++.+++++.+... +.-.+.+-+++|++|+|+.++.+++..+.++++. +|....++.|++|..+|+++.+++
T Consensus 98 ~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~------~G~~~~~~~vi~~~~~h~s~~~~~ 171 (502)
T 3hbx_A 98 NRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA------EGKPVDKPNIVTGANVQVCWEKFA 171 (502)
T ss_dssp HHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHH------TTCCCSCCEEEEETTCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHh------cCCCCCCcEEEEcCCchHHHHHHH
Confidence 34455666666543 2223344568899999999999999887765432 343345678999999999999999
Q ss_pred HHcCceEEEecCCCC-CCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhhh-----------hcC
Q psy852 524 MMAFVRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYRK-----------SQG 578 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~~-G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~~-----------ldG 578 (891)
.+.|++++.||++++ ++||+++|+++|+++ +.+|+.+.|++. |.++ +|+
T Consensus 172 ~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~ 245 (502)
T 3hbx_A 172 RYFEVELKEVKLSEGYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDA 245 (502)
T ss_dssp HHTTCEEEEECCBTTBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_pred HHcCceeEEEecCCCcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEEC
Confidence 999999999999876 999999999999874 456666555543 3322 332
Q ss_pred -------------------CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhc
Q psy852 579 -------------------IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV 615 (891)
Q Consensus 579 -------------------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~ 615 (891)
++++||+++++|||+++|.+||+++++++..+...+.
T Consensus 246 A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~ 301 (502)
T 3hbx_A 246 ASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELI 301 (502)
T ss_dssp TTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGC
T ss_pred CccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhc
Confidence 2479999999999999999999999998876654433
No 76
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.40 E-value=2.2e-11 Score=136.29 Aligned_cols=285 Identities=12% Similarity=0.058 Sum_probs=171.3
Q ss_pred CccccccCCCCCCHHHHHHHHHHHhcCCCCCccc---cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcc
Q psy852 17 HPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWA---ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDID 93 (891)
Q Consensus 17 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~---~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~ 93 (891)
...|+++...++..+.++..+...+-+..+.... ..+.......++.+++++++|.+....
T Consensus 28 ~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v---------------- 91 (416)
T 1qz9_A 28 GVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEV---------------- 91 (416)
T ss_dssp TCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSE----------------
T ss_pred CeEeecCCCcCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccE----------------
Confidence 3468887766666666666555544322111110 001112445567889999999864321
Q ss_pred ccccccCCCCCCCCcccchhHHHHHHHHHHHHhcc-ccCCccccccccCCeEEEecCCCChHHHHHHH-H---c--CCeE
Q psy852 94 MNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQK-KIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM-M---A--FVRL 166 (891)
Q Consensus 94 ~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~-~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~-~---~--~~~v 166 (891)
.+++||+. +....+..++... ...| .+-+|+++..+|.++..++. + . |.++
T Consensus 92 -------------~~~~g~t~-al~~al~~~~~~~~~~~~--------gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~ 149 (416)
T 1qz9_A 92 -------------VVTDTTSI-NLFKVLSAALRVQATRSP--------ERRVIVTETSNFPTDLYIAEGLADMLQQGYTL 149 (416)
T ss_dssp -------------EECSCHHH-HHHHHHHHHHHHHHHHST--------TCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE
T ss_pred -------------EEeCChhH-HHHHHHHhhcccccccCC--------CCcEEEEcCCCCCchHHHHHHHHHHhcCCceE
Confidence 13456642 2222222222110 0000 12357788889999877652 2 3 6788
Q ss_pred EEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCc
Q psy852 167 KILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRP 246 (891)
Q Consensus 167 ~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~ 246 (891)
+.|++ +++|+++|++. +.+|+++..+|.+|.+.|+++|+++|+++|+++|+|+|++....
T Consensus 150 ~~v~~-------~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~------- 209 (416)
T 1qz9_A 150 RLVDS-------PEELPQAIDQD------TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAV------- 209 (416)
T ss_dssp EEESS-------GGGHHHHCSTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-------
T ss_pred EEeCc-------HHHHHHHhCCC------ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCc-------
Confidence 88887 78888887543 56889999999999999999999999999999999998841100
Q ss_pred cCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccc
Q psy852 247 FMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSY 326 (891)
Q Consensus 247 ~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (891)
T Consensus 210 -------------------------------------------------------------------------------- 209 (416)
T 1qz9_A 210 -------------------------------------------------------------------------------- 209 (416)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCc-eEEEEeccccchhhccc-CccccCCCC
Q psy852 327 RDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDS-SCLWVADRYKLTSALVV-DPLYLQHGH 404 (891)
Q Consensus 327 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~-g~~~~r~~~~~~~~~~~-~~~y~~~~~ 404 (891)
...+... .+|.+++++||+++++.+. |++++++... ..+.. ...|.....
T Consensus 210 ---------------------~~~~~~~-----~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~--~~l~~~~~g~~g~~~ 261 (416)
T 1qz9_A 210 ---------------------PVDLHQA-----GADYAIGCTYKYLNGGPGSQAFVWVSPQLC--DLVPQPLSGWFGHSR 261 (416)
T ss_dssp ---------------------CCCHHHH-----TCSEEEECSSSTTCCCTTCCCEEEECTTTT--TTSCCSCCCGGGBCT
T ss_pred ---------------------CCChhhc-----CCCEEEecCcccCCCCCCCeEEEEECHHHH--hccCCCccccCcccc
Confidence 0000000 2589999999998888888 9999986521 11111 111111100
Q ss_pred --C--Ccccc--cccccC-CCCCh-hHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccC-C--ccccccC
Q psy852 405 --E--GAIDY--RHWGIP-LSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD-P--RFEISND 467 (891)
Q Consensus 405 --~--~~~~~--~~~~~~-~sr~~-~~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~-~--~~eVv~~ 467 (891)
+ ..+.+ ...... ++... ..++++.+++.+..+++.++.++..++++++.+.|.+. + +++++.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~ 335 (416)
T 1qz9_A 262 QFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTP 335 (416)
T ss_dssp TSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSC
T ss_pred ccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCC
Confidence 0 00000 001111 22232 34567788888877789999999999999999999875 5 7777654
No 77
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.40 E-value=5.9e-11 Score=131.71 Aligned_cols=87 Identities=11% Similarity=0.071 Sum_probs=76.8
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|.++..++...+.+++.++. +|+++|++.+++....|..+.+|+++..+|.+|.+.|+++|+++|++
T Consensus 129 ~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 203 (399)
T 3tqx_A 129 AIISDELNHASIIDGIRLCKAQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADK 203 (399)
T ss_dssp EEEEETTCCHHHHHHHHSCCSEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHcCCceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHH
Confidence 5888899999999999888888888885 57889999998865555567899999999999999999999999999
Q ss_pred cCCceeeecccc
Q psy852 224 FDVWLHVDGAYA 235 (891)
Q Consensus 224 ~~~~lHvDaA~G 235 (891)
+|+++++|.+|+
T Consensus 204 ~~~~li~De~~~ 215 (399)
T 3tqx_A 204 YNALVMVDDSHA 215 (399)
T ss_dssp TTCEEEEECTTT
T ss_pred cCCEEEEECCcc
Confidence 999999999994
No 78
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.40 E-value=3e-11 Score=134.18 Aligned_cols=281 Identities=10% Similarity=0.030 Sum_probs=177.1
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHH--HHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVE--KAA 523 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~--Kaa 523 (891)
.++.+.+++.+...+..+++ +++|+++++..++.+... +.-.|+++..+|++.. +++
T Consensus 54 ~~l~~~la~~~~~~~~~~v~--~~~g~t~al~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~ 112 (396)
T 2ch1_A 54 DEVKDGLRYIFQTENRATMC--VSGSAHAGMEAMLSNLLE-------------------EGDRVLIAVNGIWAERAVEMS 112 (396)
T ss_dssp HHHHHHHHHHHTCCCSCEEE--ESSCHHHHHHHHHHHHCC-------------------TTCEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcEEE--ECCcHHHHHHHHHHHhcC-------------------CCCeEEEEcCCcccHHHHHHH
Confidence 34445566666554433455 678999999988776511 1124777777888764 466
Q ss_pred HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCCC-------
Q psy852 524 MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGIE------- 580 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi~------- 580 (891)
...|.+++.+|.+.++.+|+++|+++|++.. ...++++ +..|+.. |.++ +|.+.
T Consensus 113 ~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~---~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~ 189 (396)
T 2ch1_A 113 ERYGADVRTIEGPPDRPFSLETLARAIELHQ---PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPF 189 (396)
T ss_dssp HHTTCEEEEEECCTTSCCCHHHHHHHHHHHC---CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCC
T ss_pred HHcCCceEEecCCCCCCCCHHHHHHHHHhCC---CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCcc
Confidence 7789999999999899999999999998631 1122332 3345543 4442 33331
Q ss_pred -----CccEEEEcCcccCCcccccEEEEEeCCccchhhhccC---C-CccccCC-----CCCccccCCcccccccc-cch
Q psy852 581 -----YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD---P-LYLQHGH-----EGAIDYRHWGIPLSRRF-RSL 645 (891)
Q Consensus 581 -----~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~---~-~Yl~~~~-----e~~~~~~~~ti~~SRr~-~aL 645 (891)
.+|.+..++||++++|.|+|+++++++ .+ ..+... . .|..+.. ........+ ..++-.. ..+
T Consensus 190 ~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 266 (396)
T 2ch1_A 190 YMDKWEIDAVYTGAQKVLGAPPGITPISISPK-AL-DVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKR-YHHTVASNLIF 266 (396)
T ss_dssp CTTTTTCCEEECCCC-CCCCCSSCEEEEECHH-HH-HHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC-CCCCCCHHHHH
T ss_pred chhhcCcCEEEEcCCccccCCCCeEEEEECHH-HH-HhhhhccCcccceEechHHHHHhhhhhcccCC-CCCCCcHHHHH
Confidence 259999999999999999999998763 22 222111 0 1110000 000000000 0111111 123
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc----eeEEEEEecCCcchhhhhhHHHHHHHHHhC-
Q psy852 646 KLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR----LGLVCFRLRSENNLIADQNNRKLLEDINAS- 720 (891)
Q Consensus 646 ~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~----~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~- 720 (891)
.+..+++.+..+++++..++..++++++.+.|++. +++++.+.. .++++|+++.. ....++.+.|.++
T Consensus 267 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~~~~ 339 (396)
T 2ch1_A 267 ALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKG------VDWWKVSQYAMNNF 339 (396)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTT------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCCceEEEEcCCC------CCHHHHHHHHHHhC
Confidence 44556666666788999999999999999999987 787765433 13888888421 1356788888765
Q ss_pred CcEEEeeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 721 GRLHMVPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 721 G~~~~s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
|+.+..+........+ +++ +..++++|++++++.|+++.+
T Consensus 340 gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 340 SLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp CBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred CEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHH
Confidence 9875444333345567 998 557799999999999998873
No 79
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.39 E-value=3.2e-11 Score=131.71 Aligned_cols=263 Identities=11% Similarity=0.043 Sum_probs=169.6
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH-HHHHHHHcCceEEEecCCCCCCcC
Q psy852 464 ISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC-VEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 464 Vv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S-v~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
++ +++|+++++..++.+++. .++-+++.+...|.+ ...++...|.+++.+|.++++.+|
T Consensus 59 v~--~~~g~t~a~~~~~~~~~~------------------~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 118 (366)
T 1m32_A 59 VL--LQGSGSYAVEAVLGSALG------------------PQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPD 118 (366)
T ss_dssp EE--EESCHHHHHHHHHHHSCC------------------TTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCC
T ss_pred EE--EecChHHHHHHHHHHhcC------------------CCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCC
Confidence 55 678999999988877531 123356777788986 456667778899999999999999
Q ss_pred HHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcC----------CC--CccEEEEcCcccCC
Q psy852 543 GATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQG----------IE--YADSFNVNVNKWLL 594 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldG----------i~--~aDSIs~d~HK~L~ 594 (891)
+++|+++|+++.. ...++++. ..|... |+++ +|+ +. .+|.++.++|||++
T Consensus 119 ~~~l~~~l~~~~~--~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~ 196 (366)
T 1m32_A 119 VQAIDAILNADPT--ISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQ 196 (366)
T ss_dssp HHHHHHHHHHCTT--CCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTC
T ss_pred HHHHHHHHhcCCC--eEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCccccc
Confidence 9999999987421 11222222 235443 4431 121 22 37999999999999
Q ss_pred cccccEEEEEeCCccchhhhccC-CCccccCCCCCccccCC----cc-ccccc-ccchHHHHHHHHHHHhh-HHHHHHHH
Q psy852 595 TAFDSSCLWVADRYKLTSALVVD-PLYLQHGHEGAIDYRHW----GI-PLSRR-FRSLKLWFVIRTYGLSG-LQKYIRRH 666 (891)
Q Consensus 595 ~P~g~G~llvR~~~~L~~~l~~~-~~Yl~~~~e~~~~~~~~----ti-~~SRr-~~aL~lW~~L~~lG~~G-~~~~i~~~ 666 (891)
+|.|+|+++++++ +.+.+... ..|..... .....+ +. .++-. .....+..+++.+...| +.+..++.
T Consensus 197 ~~~g~G~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 271 (366)
T 1m32_A 197 GVPGFAFVIAREQ--KLAACKGHSRSLSLDLY---AQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRY 271 (366)
T ss_dssp CCSSEEEEEEEHH--HHTTCTTCCSCSTTCHH---HHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCCceEEEEECHH--HHHhhcCCCCCccccHH---HHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHH
Confidence 9999999999864 21211110 11110000 000000 00 01111 11234556666666666 88889999
Q ss_pred HHHHHHHHHHhccCCCcEEeCCC--cee-EEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCC
Q psy852 667 CELAKLFEGKVRRDPRFEISNDV--RLG-LVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQER 742 (891)
Q Consensus 667 ~~lA~~L~~~L~~~~~~eil~~~--~~~-iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~ 742 (891)
.++++++.+.|++. +++++.++ ..+ +++|++++. .+....++.+.|.++|+....+... +...+ ++++..
T Consensus 272 ~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~gi~v~~~~~~-~~~~iRi~~~~~ 345 (366)
T 1m32_A 272 QQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPED----PQYRFSEFYRRLKEQGFVIYPGKVS-QSDCFRIGNIGE 345 (366)
T ss_dssp HHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCC----TTCCHHHHHHHHHHTTEECEECCCS-SSCEEEEECCSS
T ss_pred HHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCcc----CCCCHHHHHHHHHHCCEEEECCcCC-CCCEEEEecCCC
Confidence 99999999999987 77776542 344 888988531 0113567888898889775444333 44566 999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy852 743 KRKDDLAYKRSFFVRML 759 (891)
Q Consensus 743 tT~edId~li~~L~ei~ 759 (891)
++++||+++++.|+++.
T Consensus 346 ~~~~~i~~~~~~l~~~~ 362 (366)
T 1m32_A 346 VYAADITALLTAIRTAM 362 (366)
T ss_dssp CCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 80
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.38 E-value=1.8e-12 Score=141.43 Aligned_cols=156 Identities=19% Similarity=0.157 Sum_probs=102.6
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCC
Q psy852 28 NSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQ 107 (891)
Q Consensus 28 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~ 107 (891)
...|.++..+.....+ .....+ ...+..++.+++++++| ++.. . .
T Consensus 19 ~~~~~v~~a~~~~~~~---~~~~~~--~~~~~~~l~~~la~~~g-~~~~--------v---------------------~ 63 (356)
T 1v72_A 19 GASPEVAQALVKHSSG---QAGPYG--TDELTAQVKRKFCEIFE-RDVE--------V---------------------F 63 (356)
T ss_dssp CCCHHHHHHHHHTTSS---CCCSTT--CSHHHHHHHHHHHHHHT-SCCE--------E---------------------E
T ss_pred CCCHHHHHHHHhhccC---cccccc--cchHHHHHHHHHHHHhC-CCCc--------E---------------------E
Confidence 3457777666555322 111111 23566778889999998 4211 0 1
Q ss_pred cccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHH--HHHc--CCeEEEEecCCCCcccHHHHH
Q psy852 108 SLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA--AMMA--FVRLKILEPDDKNSLRGATLR 183 (891)
Q Consensus 108 ~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~ka--a~~~--~~~v~~V~~d~~g~id~~~L~ 183 (891)
+++||+.. +...+..++. +...|+++..+|++...+ +... |.+++.||++ ++.+|+++|+
T Consensus 64 ~~~~gt~a-~~~al~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~d~~~l~ 127 (356)
T 1v72_A 64 LVPTGTAA-NALCLSAMTP--------------PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP-AAKLDIVRLR 127 (356)
T ss_dssp EESCHHHH-HHHHHHTSCC--------------TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG-GGCCCHHHHH
T ss_pred EeCCccHH-HHHHHHHhcC--------------CCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC-CCeEcHHHHH
Confidence 35688753 3222222211 223478888899998776 6544 7799999886 5899999999
Q ss_pred H-HHHhhh-hcCCcceEEEeecccCcccc---ccCHHHHHHHHHHcCCceeeecccc
Q psy852 184 Q-VMQQDE-TMGYIPFFVSTTLGTTSCCS---FDNLAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 184 ~-~l~~~~-~~g~~p~~V~~t~Gtt~~Ga---vDpl~~I~~i~~~~~~~lHvDaA~G 235 (891)
+ ++++.. ..+..+.+|+++..++ +|. .+++++|+++|+++|+++|+|++|+
T Consensus 128 ~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 183 (356)
T 1v72_A 128 ERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRF 183 (356)
T ss_dssp HHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTH
T ss_pred HHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhh
Confidence 9 886521 1223456777776554 999 7889999999999999999999984
No 81
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.37 E-value=5.3e-13 Score=149.41 Aligned_cols=262 Identities=12% Similarity=0.021 Sum_probs=169.4
Q ss_pred CCCCHHHHHHHHHHHhcC--CCCCc-c---ccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccccccc
Q psy852 26 SGNSYPSVLADMLSDAIG--CIGFS-W---AASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDY 99 (891)
Q Consensus 26 ~~~~~~~~~~~~l~~~~n--~~~~~-~---~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~ 99 (891)
+.+..+.++..|...+.+ .|+.+ + ..++.+.++-.++.+.+++++|.++... +
T Consensus 13 pt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~--------------v------- 71 (361)
T 3m5u_A 13 PSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYE--------------V------- 71 (361)
T ss_dssp SCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEE--------------E-------
T ss_pred CCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCce--------------E-------
Confidence 344667888888776653 23222 2 2367788888899999999999974310 0
Q ss_pred CCCCCCCCc-ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCCc--
Q psy852 100 MTPANQPQS-LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNS-- 176 (891)
Q Consensus 100 ~t~~~~~~~-~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~-- 176 (891)
.| |+|||.+.|+.+.++. . +. ...+|+++..+|.++..+.+ .|.++.+|++|.+|.
T Consensus 72 -------~f~t~~~T~a~n~~~~~~~--~-~~----------~~~~i~~~~~~~~~~~~a~~-~G~~v~~~~~~~~g~~~ 130 (361)
T 3m5u_A 72 -------LFLQGGASLQFAMIPMNLA--L-NG----------VCEYANTGVWTKKAIKEAQI-LGVNVKTVASSEESNFD 130 (361)
T ss_dssp -------EEESSHHHHHHHHHHHHHC--C-SS----------CEEEEECSHHHHHHHHHHHH-TTCCEEEEEECTTTTSC
T ss_pred -------EEEcCcHHHHHHHHHHhcC--C-CC----------eEEEEeCCHHHHHHHHHHHH-cCCceEEEecccCcCCC
Confidence 24 6899988777777664 1 00 12356777777765544433 467999999999885
Q ss_pred ccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCccccc
Q psy852 177 LRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDN 256 (891)
Q Consensus 177 id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~ 256 (891)
++++. + |+++ +.+|+++..+|.+|++.|. +++ +|+++|||++++
T Consensus 131 ~~~~~-~--l~~~------t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~--------------------- 174 (361)
T 3m5u_A 131 HIPRV-E--FSDN------ADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSD--------------------- 174 (361)
T ss_dssp SCCCC-C--CCTT------SSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGG---------------------
T ss_pred cCChh-h--cCCC------CCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccc---------------------
Confidence 57766 3 5544 3588899999999998552 333 388888888772
Q ss_pred CCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEE
Q psy852 257 LHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLH 336 (891)
Q Consensus 257 ~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (891)
T Consensus 175 -------------------------------------------------------------------------------- 174 (361)
T 3m5u_A 175 -------------------------------------------------------------------------------- 174 (361)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcc-cCccccCCCCCCccccccccc
Q psy852 337 VDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGI 415 (891)
Q Consensus 337 ~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~ 415 (891)
.+.. .-+ +..+|.+++++|||+ +|.+.|++++|++..- .... ..|.|+..... .. ....
T Consensus 175 ------~g~~-~id-------~~~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~-~~~~~~~p~~~~~~~~--~~--~~~~ 234 (361)
T 3m5u_A 175 ------FFSR-KVD-------FSNIALFYGGVQKNA-GISGLSCIFIRKDMLE-RSKNKQIPSMLNYLTH--AE--NQSL 234 (361)
T ss_dssp ------TTSS-CCC-------CTTEEEEEEETTTTS-SCTTCEEEEEEHHHHH-HHHTCCCCGGGCHHHH--HH--TTTC
T ss_pred ------cCCC-CCC-------cccCCEEEEechhcc-CCCccEEEEEcHHHHh-hhcCCCCCceeehHHH--hh--cCCC
Confidence 1100 000 012589999999999 5999999999975321 1111 12333211000 00 0001
Q ss_pred CCCCCh-hHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhhccCCcc-ccc
Q psy852 416 PLSRRF-RSLKLWFVIRTYGLS-GLQKYIRRHCELAKLFEGKVRRDPRF-EIS 465 (891)
Q Consensus 416 ~~sr~~-~~l~~w~~l~~~g~~-G~~~ii~~~lelAr~l~~~L~~~~~~-eVv 465 (891)
.++-+. ..+.+-.+++++-.. |+.++.++..++++++.+.|.+.+++ +++
T Consensus 235 ~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~ 287 (361)
T 3m5u_A 235 FNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGH 287 (361)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEES
T ss_pred CCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeecc
Confidence 122222 356777888888888 89999999999999999999998875 554
No 82
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.37 E-value=2.6e-11 Score=133.95 Aligned_cols=286 Identities=11% Similarity=0.101 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccch
Q psy852 437 GLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAH 516 (891)
Q Consensus 437 G~~~ii~~~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH 516 (891)
.|........++.+.+++.+...++ +++ +++|+++++..++.+.+. .+.-.|+++..+|
T Consensus 53 ~y~~~~~~~~~l~~~la~~~g~~~~-~v~--~~~g~t~a~~~~~~~~~~------------------~~gd~vl~~~~~~ 111 (390)
T 1elu_A 53 ANQHIQQLIAQLRQALAETFNVDPN-TIT--ITDNVTTGCDIVLWGLDW------------------HQGDEILLTDCEH 111 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGG-GEE--EESSHHHHHHHHHHHSCC------------------CTTCEEEEETTCC
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHH-HEE--EeCChHHHHHHHHhCCCC------------------CCCCEEEEecCcc
Confidence 3444334455566677777754333 455 678999999988877530 0123577888888
Q ss_pred HHHHHH----HHHcCceEEEecCC--CCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------hh----hh
Q psy852 517 SCVEKA----AMMAFVRLKILEPD--DKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------CY----RK 575 (891)
Q Consensus 517 ~Sv~Ka----a~l~gv~v~~Vp~d--~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c~----~~ 575 (891)
.+...+ +...|.+++.+|.+ .++.+|+++|+++|++.+ ..++++.. .|... |. ++
T Consensus 112 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~----~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~ 187 (390)
T 1elu_A 112 PGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKT----RLVILSHLLWNTGQVLPLAEIMAVCRRHQGNY 187 (390)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTE----EEEEEESBCTTTCCBCCHHHHHHHHHHCCSSS
T ss_pred cHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCc----eEEEEeccccCCceecCHHHHHHHHhhhhhhc
Confidence 886543 45668899999987 688999999999987531 12223322 35443 66 52
Q ss_pred -----hcCC------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-CCCcccc--CC-CCCccccC-
Q psy852 576 -----SQGI------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQH--GH-EGAIDYRH- 633 (891)
Q Consensus 576 -----ldGi------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~~~Yl~~--~~-e~~~~~~~- 633 (891)
+|++ ..+|.++.++|||+++|.|+|+++++++. + +.+.. ...+... .. ...+.+..
T Consensus 188 ~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~~~~~ 265 (390)
T 1elu_A 188 PVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDC-L-GEINPTYVGWRSITYGAKGEPTGWAEG 265 (390)
T ss_dssp CCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTT-G-GGCCCCSCCTTTEEECTTSCEEEECSG
T ss_pred CcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHh-H-hhcCCccccCCcccccccCcccccccc
Confidence 3321 24799999999999999999999998642 2 22211 0011000 00 00000000
Q ss_pred -Cccc-cccc-ccchHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHhccCCCcEEeCC--CceeEEEEEecCCcchhhh
Q psy852 634 -WGIP-LSRR-FRSLKLWFVIRTYGLSG-LQKYIRRHCELAKLFEGKVRRDPRFEISND--VRLGLVCFRLRSENNLIAD 707 (891)
Q Consensus 634 -~ti~-~SRr-~~aL~lW~~L~~lG~~G-~~~~i~~~~~lA~~L~~~L~~~~~~eil~~--~~~~iV~Fr~~~~~~~~~d 707 (891)
..+. ++-. .....++.+++.+...+ +++..++..++++++.+.|++.++++++.+ ...++++|++.+.
T Consensus 266 ~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~------ 339 (390)
T 1elu_A 266 GKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSP------ 339 (390)
T ss_dssp GGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSS------
T ss_pred hHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCC------
Confidence 0011 1111 11234556676666666 888999999999999999999889998763 3578889988421
Q ss_pred hhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 708 QNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 708 ~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
....++.+.|.+.|+.+..+. +...+ ++++..++++|++++++.|+++
T Consensus 340 ~~~~~~~~~l~~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 340 LGHRAIVQKLEEQRIYLRTIA---DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp SCHHHHHHHHHHTTEECEEET---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHCCEEEEecC---CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 135678888988898754443 34566 9998889999999999988753
No 83
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.37 E-value=7.2e-12 Score=137.94 Aligned_cols=83 Identities=5% Similarity=-0.006 Sum_probs=70.7
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|++...++...|.+++.+++++++.+|+++|++.+++. +.+|+.+.. +|.+.|+++|.++|++
T Consensus 76 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~l~~i~~l~~~ 146 (375)
T 2fnu_A 76 EIITTPISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINER------TKAIVSVDY---AGKSVEVESVQKLCKK 146 (375)
T ss_dssp EEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCTT------EEEEEEECG---GGCCCCHHHHHHHHHH
T ss_pred EEEECCCccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCcC------ceEEEEeCC---cCCccCHHHHHHHHHH
Confidence 5888999999999998878889999999988999999999888653 234444443 8999999999999999
Q ss_pred cCCceeeecccc
Q psy852 224 FDVWLHVDGAYA 235 (891)
Q Consensus 224 ~~~~lHvDaA~G 235 (891)
+|+++++|+|++
T Consensus 147 ~~~~li~D~a~~ 158 (375)
T 2fnu_A 147 HSLSFLSDSSHA 158 (375)
T ss_dssp HTCEEEEECTTC
T ss_pred cCCEEEEECccc
Confidence 999999999984
No 84
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.37 E-value=8.6e-12 Score=144.44 Aligned_cols=275 Identities=13% Similarity=0.073 Sum_probs=165.3
Q ss_pred CHHHHHHHHHHHhcCCC--C----CccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCC
Q psy852 29 SYPSVLADMLSDAIGCI--G----FSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTP 102 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~--~----~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~ 102 (891)
..+.++..+...+.|.. + ..|..++...++|..+.+++++++|.+.+... ..+
T Consensus 56 ~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~-----~~V---------------- 114 (483)
T 1rv3_A 56 ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWG-----VNV---------------- 114 (483)
T ss_dssp CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEE-----EEC----------------
T ss_pred CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCc-----eEE----------------
Confidence 45666666655554432 1 12345677889999999999999999743100 000
Q ss_pred CCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHH--------HHcC--CeEEEEecC
Q psy852 103 ANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA--------MMAF--VRLKILEPD 172 (891)
Q Consensus 103 ~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa--------~~~~--~~v~~V~~d 172 (891)
.+ +.|+ +.|...+. +--+ +...|+++..+|.+..... .+.| .+.+.+++|
T Consensus 115 ----~~-~sGs-~an~~~~~-all~-------------pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~ 174 (483)
T 1rv3_A 115 ----QP-YSGS-PANFAVYT-ALVE-------------PHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVN 174 (483)
T ss_dssp ----CC-SSHH-HHHHHHHH-HHTC-------------TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBC
T ss_pred ----EE-CCcH-HHHHHHHH-HhcC-------------CCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccc
Confidence 12 3444 44444221 1111 1224777777777665321 1222 345555557
Q ss_pred -CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCC
Q psy852 173 -DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGK 251 (891)
Q Consensus 173 -~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~ 251 (891)
++|.+|+++|++.+++.. |.+|++ ..++.+ .+.|+++|+++|+++|++|++|+|++..+...
T Consensus 175 ~~~~~iD~d~le~~i~~~~-----tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~---------- 237 (483)
T 1rv3_A 175 PDTGYIDYDRLEENARLFH-----PKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVA---------- 237 (483)
T ss_dssp TTTCSBCHHHHHHHHHHHC-----CSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH----------
T ss_pred cCCCcCCHHHHHHHHhhcC-----CcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhccccc----------
Confidence 679999999999998432 346666 555666 89999999999999999999999983110000
Q ss_pred cccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccccccccccc
Q psy852 252 TSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIF 331 (891)
Q Consensus 252 ~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (891)
T Consensus 238 -------------------------------------------------------------------------------- 237 (483)
T 1rv3_A 238 -------------------------------------------------------------------------------- 237 (483)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhc-ccCccccCCCCCCcccc
Q psy852 332 DVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSAL-VVDPLYLQHGHEGAIDY 410 (891)
Q Consensus 332 ~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~-~~~~~y~~~~~~~~~~~ 410 (891)
++ .+. + +..+|.++.++||++.+|.+ |++++++...-.... .....| .....++.
T Consensus 238 ~~--------------~~~--p----~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y---~~~~~~~~ 293 (483)
T 1rv3_A 238 GV--------------VPS--P----FEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILY---NLESLINS 293 (483)
T ss_dssp TS--------------SCC--G----GGTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBC---CHHHHHHH
T ss_pred CC--------------CCC--C----CCCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhh---HHHHHhhh
Confidence 00 000 0 11469999999999999998 999998752100000 000000 00000000
Q ss_pred c-ccccCCCCChh-HHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCcccccc
Q psy852 411 R-HWGIPLSRRFR-SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 411 ~-~~~~~~sr~~~-~l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv~ 466 (891)
. ..+..++-... ..++..+++.....++.++.++..++++++.+.|.+. +++++.
T Consensus 294 ~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 350 (483)
T 1rv3_A 294 AVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVT 350 (483)
T ss_dssp HHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGG
T ss_pred hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEecc
Confidence 0 00113333332 3456678888777899999999999999999999886 788774
No 85
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.37 E-value=4.6e-12 Score=144.86 Aligned_cols=150 Identities=13% Similarity=0.078 Sum_probs=111.7
Q ss_pred HHHHHHHHHhhccCCcc----ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHH
Q psy852 446 CELAKLFEGKVRRDPRF----EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK 521 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~----eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~K 521 (891)
.++.+++++.+...+.. .++ +++|+||+|+.++.++|..+.++.+. .|....++.|++|. +|+++.+
T Consensus 84 ~~~~~~la~l~g~~~~~~~~~~~~--~t~ggtea~~~al~a~~~~~~~~~~~------~G~~~~~~~vi~~~-~h~~~~~ 154 (452)
T 2dgk_A 84 LRCVNMVADLWHAPAPKNGQAVGT--NTIGSSEACMLGGMAMKWRWRKRMEA------AGKPTDKPNLVCGP-VQICWHK 154 (452)
T ss_dssp HHHHHHHHHHTTCCCCTTSCCEEE--EESSHHHHHHHHHHHHHHHHHHHHHH------TTCCCSCCEEEESS-CCHHHHH
T ss_pred HHHHHHHHHHhCCCcccccCCceE--EeCCHHHHHHHHHHHHHHHHHHHHHh------cCCCCCCcEEEECC-CcHHHHH
Confidence 34555666666543332 244 78999999999999998866543221 22211245788899 9999999
Q ss_pred HHHHcCceEEEecCCC-CCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-------------hhhh-----------h
Q psy852 522 AAMMAFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-------------CYRK-----------S 576 (891)
Q Consensus 522 aa~l~gv~v~~Vp~d~-~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-------------c~~~-----------l 576 (891)
++.+.|++++.||+++ +++||+++|+++|+++ +.+|+.+.|++. |+++ +
T Consensus 155 ~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 155 FARYWDVELREIPMRPGQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp HHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HHHHcCceEEEEecCCCCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEE
Confidence 9999999999999987 7999999999999763 567777776654 4331 1
Q ss_pred cC-------------------CCCccEEEEcCcccCCcccccEEEEEeCCccc
Q psy852 577 QG-------------------IEYADSFNVNVNKWLLTAFDSSCLWVADRYKL 610 (891)
Q Consensus 577 dG-------------------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L 610 (891)
|+ ++++||+++|+|||+++|.+||++++|++..+
T Consensus 229 D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~ 281 (452)
T 2dgk_A 229 DAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEAL 281 (452)
T ss_dssp ECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGS
T ss_pred EcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHH
Confidence 11 34799999999999999999999999987544
No 86
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.34 E-value=1.9e-11 Score=136.00 Aligned_cols=275 Identities=10% Similarity=0.083 Sum_probs=153.2
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH-
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM- 525 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l- 525 (891)
++.+.+++.+...+. +++ +++|+++++..++.+......+. +++.|+++..+|++...++..
T Consensus 67 ~l~~~la~~~~~~~~-~v~--~~~g~t~al~~~~~~l~~~~~~~--------------gd~~Vl~~~~~~~~~~~~~~~~ 129 (400)
T 3vax_A 67 RAREYLASTVSAEPD-ELI--FTSGATESNNIALLGLAPYGERT--------------GRRHIITSAIEHKAVLEPLEHL 129 (400)
T ss_dssp HHHHHHHHHTTCCGG-GEE--EESCHHHHHHHHHHTTHHHHHHH--------------TCCEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC-cEE--EeCCHHHHHHHHHHHHHHhhccC--------------CCCEEEECccccHhHHHHHHHH
Confidence 344566666665433 455 68899999999988775322111 111588899999998887764
Q ss_pred --cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCCC-------
Q psy852 526 --AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGIE------- 580 (891)
Q Consensus 526 --~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi~------- 580 (891)
.|.+++.+|.++++.+|+++|+++|++.++ .++++. ..|+.. |.++ +|++.
T Consensus 130 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~----~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~ 205 (400)
T 3vax_A 130 AGRGFEVDFLTPGPSGRISVEGVMERLRPDTL----LVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG 205 (400)
T ss_dssp HTTTCEEEEECCCTTCCCCHHHHHTTCCTTEE----EEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG
T ss_pred HhcCCeEEEEccCCCCCcCHHHHHHhcCCCce----EEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc
Confidence 488999999999999999999999875321 122221 245443 4331 22211
Q ss_pred ---C-ccEEEEcCcccCCcccccEEEE-EeCCccchhhhccCCCccccCCCCCccccCCccccccccc-chHHHHHHHHH
Q psy852 581 ---Y-ADSFNVNVNKWLLTAFDSSCLW-VADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFR-SLKLWFVIRTY 654 (891)
Q Consensus 581 ---~-aDSIs~d~HK~L~~P~g~G~ll-vR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~-aL~lW~~L~~l 654 (891)
. +|.++.++||+ ++|.|+|+++ ++++..........+ ++..... . ..+. .++-... ...+-.+++.
T Consensus 206 ~~~~~~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-~---~~~~-~~~~~~~~~~a~~~al~~- 277 (400)
T 3vax_A 206 DLTTPIDMISISGHKI-GAPKGVGALVTRRREEMDDERVPLEP-IMFGGGQ-E---RKLR-PGTLPVPLIMGLAEAAKI- 277 (400)
T ss_dssp GGGSCCSEEEEETGGG-TSCSSCEEEEECBCSSSTTCBCCCCC-SSCSSCT-G---GGTS-CSCCCHHHHHHHHHHHHH-
T ss_pred ChhhcCcEEEEeHHHh-CCCCceEEEEEecchhccccccccCc-eecCCCc-e---eeee-cCCCCHHHHHHHHHHHHH-
Confidence 1 89999999995 5688999999 988432210000001 1100000 0 0000 0011111 1122233332
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc---eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc-
Q psy852 655 GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR---LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ- 730 (891)
Q Consensus 655 G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~---~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~- 730 (891)
..+++++..++..++++++.+.|+ .+++++..++. .++++|++.+. ....+.+.|. .|+.+..+..+
T Consensus 278 ~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~-~gi~v~~g~~~~ 348 (400)
T 3vax_A 278 FEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDV-------DAEAFLVTLK-DLVAVATGSAST 348 (400)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHH-HHHHHTTTTEEE
T ss_pred HHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHh-cCcEEEeccccc
Confidence 245788999999999999999999 89999886654 36889988643 2345666666 55532111100
Q ss_pred ------------------cCCeEE-EEe-cCCCCHHHHHHHHHHHHHHH
Q psy852 731 ------------------EQNDEV-FEL-QERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 731 ------------------~g~~~l-~sv-~~~tT~edId~li~~L~ei~ 759 (891)
.....+ +++ +..+|++|++++++.|+++.
T Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 397 (400)
T 3vax_A 349 SASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK 397 (400)
T ss_dssp EEEECCHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred CCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence 013567 999 99999999999999998765
No 87
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.33 E-value=2.8e-11 Score=133.24 Aligned_cols=278 Identities=9% Similarity=0.070 Sum_probs=173.7
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+.. + +++ +++|+++++..++.+++.. . .+.-.|+++..+|++...++...
T Consensus 36 ~l~~~la~~~~~-~--~v~--~~~ggt~al~~~~~~~~~~----~------------~~gd~Vl~~~~~~~~~~~~~~~~ 94 (375)
T 2fnu_A 36 LFEEALCEFLGV-K--HAL--VFNSATSALLTLYRNFSEF----S------------ADRNEIITTPISFVATANMLLES 94 (375)
T ss_dssp HHHHHHHHHHTC-S--EEE--EESCHHHHHHHHHHHSSCC----C------------TTSCEEEECSSSCTHHHHHHHHT
T ss_pred HHHHHHHHHhCC-C--eEE--EeCCHHHHHHHHHHHhccc----C------------CCCCEEEECCCccHhHHHHHHHC
Confidence 344455555543 2 455 6889999999888776310 0 11235888999999999999888
Q ss_pred CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcC---------------
Q psy852 527 FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQG--------------- 578 (891)
Q Consensus 527 gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldG--------------- 578 (891)
|.+++.+|.++++.+|+++|+++|++++ ..++++...|... |+++ +|+
T Consensus 95 g~~~~~~~~~~~~~~d~~~l~~~i~~~~----~~v~~~~~tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~ 170 (375)
T 2fnu_A 95 GYTPVFAGIKNDGNIDELALEKLINERT----KAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGG 170 (375)
T ss_dssp TCEEEECCBCTTSSBCGGGSGGGCCTTE----EEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTS
T ss_pred CCEEEEeccCCCCCCCHHHHHhhcCcCc----eEEEEeCCcCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccc
Confidence 9999999999888999999999886532 1233344455543 4331 111
Q ss_pred CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHh
Q psy852 579 IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLS 657 (891)
Q Consensus 579 i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~ 657 (891)
...++..++++||+++ | |+|.+++++...+.+.+. ........ . ..+.+.. . ..+.++....+..++.....+
T Consensus 171 ~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~-~-~~~~~~~~~~~~~a~~~~~~~ 244 (375)
T 2fnu_A 171 FALASVFSFHAIKPIT-T-AEGGAVVTNDSELHEKMKLFRSHGMLK-K-DFFEGEV-K-SIGHNFRLNEIQSALGLSQLK 244 (375)
T ss_dssp SSSEEEEECCTTSSSC-C-SSCEEEEESCHHHHHHHHHHTBTTEEE-S-SSSCEEE-S-SCCCBCCCCHHHHHHHHHHHT
T ss_pred cCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHHHHHHHHHhcCCcc-c-ccccccc-c-cccccCCCCHHHHHHHHHHHH
Confidence 1236778899999984 6 899999964322222121 11000000 0 0000000 0 001112223333444445567
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-----ceeEEEEEecCCcchhhhh-hHHHHHHHHHhCCcEEEeecc--
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRDPRFEISNDV-----RLGLVCFRLRSENNLIADQ-NNRKLLEDINASGRLHMVPAS-- 729 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-----~~~iV~Fr~~~~~~~~~d~-ln~~L~~~L~~~G~~~~s~s~-- 729 (891)
++.+..++..++++++.+.|++++++++..++ ...++.+++.+. .. ....+.+.|.+.|+.....+.
T Consensus 245 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~L~~~gi~v~~~~~p~ 319 (375)
T 2fnu_A 245 KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK-----FFTCKKLILESLHKRGILAQVHYKPI 319 (375)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGG-----GGGGHHHHHHHHHHTTEECBCCCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcc-----ccchHHHHHHHHHHCCCCcccccccc
Confidence 88999999999999999999999899886541 223455666431 11 356788899888987442110
Q ss_pred -----c--------------cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 730 -----Q--------------EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 730 -----~--------------~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
. .....+ ++++.++|++||++++++|+++.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~ 370 (375)
T 2fnu_A 320 YQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFE 370 (375)
T ss_dssp GGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHH
Confidence 0 012467 999999999999999999998764
No 88
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.32 E-value=1.1e-10 Score=132.89 Aligned_cols=228 Identities=12% Similarity=0.051 Sum_probs=147.5
Q ss_pred EEEecccchHHHHHHH----HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe--cCCccc--------hh
Q psy852 508 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST--TLGTTS--------CY 573 (891)
Q Consensus 508 vI~~S~~aH~Sv~Kaa----~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva--taGTT~--------c~ 573 (891)
.|+++..+|++...++ ...|++++.+|+ ++|.+|+++ |+++ ...++++. ..|... |+
T Consensus 152 ~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~~~----t~~v~i~~pn~tG~~~~l~~i~~la~ 222 (438)
T 1wyu_A 152 GVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VGEE----VGAVVVQNPNFLGALEDLGPFAEAAH 222 (438)
T ss_dssp EEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CCTT----EEEEEEESSCTTSBCCCHHHHHHHHH
T ss_pred EEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCHHH----hCCC----eEEEEEECCCCCeEEecHHHHHHHHH
Confidence 5889999999988665 347899999998 568888776 4332 12233333 334433 43
Q ss_pred h-----h--hcCC----------CCccEEEEcCcc-----cCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccc
Q psy852 574 R-----K--SQGI----------EYADSFNVNVNK-----WLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDY 631 (891)
Q Consensus 574 ~-----~--ldGi----------~~aDSIs~d~HK-----~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~ 631 (891)
+ + +|+. .++|.+++|.|| |+++| ++|+++++++ +.+.+ +.++..........
T Consensus 223 ~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~--~~~~l---~~~~~g~~~~~~~~ 296 (438)
T 1wyu_A 223 GAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA--FVRQL---PGRLVSETVDVEGR 296 (438)
T ss_dssp HTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG--GGGGC---CSCCEEEEEBTTSC
T ss_pred HcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCccCCCC-CeeEEEEcHH--HHHhC---CCceeccccccCCC
Confidence 3 2 2321 247999999888 78889 9999999865 22222 11110000000000
Q ss_pred cCCcc------------ccccc------ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCC-Ccee
Q psy852 632 RHWGI------------PLSRR------FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND-VRLG 692 (891)
Q Consensus 632 ~~~ti------------~~SRr------~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~-~~~~ 692 (891)
..+.+ ..+.. .-++..|..+..+|.+|++++.++..++++++.+.|+++++++++.+ +..+
T Consensus 297 ~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~ 376 (438)
T 1wyu_A 297 RGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFN 376 (438)
T ss_dssp EEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCS
T ss_pred cceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEE
Confidence 00000 00001 11233344488889999999999999999999999999999999875 4566
Q ss_pred EEEEEecCCcchhhhhhHHHHHHHHHhCCcEE-EeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 693 LVCFRLRSENNLIADQNNRKLLEDINASGRLH-MVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 693 iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~-~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
+++|++. . ...++.++|.++|+.. ..+....+...+ ++++.++|++||++++++|+++
T Consensus 377 ~~~~~~~-~-------~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 377 EFALALP-K-------DPEAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEV 436 (438)
T ss_dssp EEEEECS-S-------CHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEeCC-C-------CHHHHHHHHHHCCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHH
Confidence 7777753 1 3567888998899874 122222235567 9999999999999999999865
No 89
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.32 E-value=3.8e-10 Score=124.20 Aligned_cols=271 Identities=11% Similarity=0.097 Sum_probs=172.8
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH--
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA-- 523 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa-- 523 (891)
.++.+.+++.+...+. +++ +++|+++++..++.+++.... .+.-.|+++..+|++...++
T Consensus 47 ~~l~~~la~~~g~~~~-~v~--~~~g~t~a~~~~~~~~~~~~~---------------~~gd~vl~~~~~~~~~~~~~~~ 108 (384)
T 1eg5_A 47 EKAREKVAKVLGVSPS-EIF--FTSCATESINWILKTVAETFE---------------KRKRTIITTPIEHKAVLETMKY 108 (384)
T ss_dssp HHHHHHHHHHHTSCGG-GEE--EESCHHHHHHHHHHHHHHHTT---------------TTCCEEEECTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCC-eEE--EECCHHHHHHHHHHhhhhhcc---------------CCCCEEEECCCCchHHHHHHHH
Confidence 3444455555553333 455 678999999999888764210 01235888888999887766
Q ss_pred -HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-------hcC------
Q psy852 524 -MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-------SQG------ 578 (891)
Q Consensus 524 -~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-------ldG------ 578 (891)
...|.+++.+|.++++.+|+++|+++|++.+ ..++++. ..|... |.++ +|.
T Consensus 109 ~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~----~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~ 184 (384)
T 1eg5_A 109 LSMKGFKVKYVPVDSRGVVKLEELEKLVDEDT----FLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGK 184 (384)
T ss_dssp HHHTTCEEEECCBCTTSCBCHHHHHHHCCTTE----EEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTT
T ss_pred HHhcCCEEEEEccCCCCccCHHHHHHHhCCCC----eEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCC
Confidence 4568899999999999999999999997531 1222222 134443 4331 121
Q ss_pred ----CC--CccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccchHHHHHH
Q psy852 579 ----IE--YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVI 651 (891)
Q Consensus 579 ----i~--~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L 651 (891)
+. .+|.+++++||++ +|.|+|+++++++..+.+.+. ...... .. ..++-. .....++.++
T Consensus 185 ~~~~~~~~~~di~~~s~sK~~-g~~G~G~~~~~~~~~~~~~~~------~~~~~~-----~~-~~~~~~~~~~~a~~~al 251 (384)
T 1eg5_A 185 IPFSLEKLEVDYASFSAHKFH-GPKGVGITYIRKGVPIRPLIH------GGGQER-----GL-RSGTQNVPGIVGAARAM 251 (384)
T ss_dssp SCCCCTTTCCSEEEEEGGGGT-SCTTCEEEEECTTSCCCCSBC------SSCTTT-----TT-BCSCCCHHHHHHHHHHH
T ss_pred cccCchhcCCCEEEecHHHhc-CCCceEEEEEcCCCccccccc------cCcccc-----cc-cCCCCChHHHHHHHHHH
Confidence 11 4799999999985 576799999987631111110 000000 00 001111 1122334455
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC---ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec
Q psy852 652 RTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV---RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA 728 (891)
Q Consensus 652 ~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~---~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s 728 (891)
+. ..+.+.+..++..++++++.+.|++ ++++++.++ ..+.++|.+.+. ....+.+.|.+.|+.+..+.
T Consensus 252 ~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~g~ 322 (384)
T 1eg5_A 252 EI-AVEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPNI-------RGSTLQNLLSGYGIYVSTSS 322 (384)
T ss_dssp HH-HHHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHHHTTEECBC--
T ss_pred HH-HHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHhhCCeEEeccc
Confidence 44 2457888899999999999999988 788887654 246888888632 34678888888898754432
Q ss_pred ccc-------------------CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 729 SQE-------------------QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 729 ~~~-------------------g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+. +...+ ++++..+|++|++++++.|+++++
T Consensus 323 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 374 (384)
T 1eg5_A 323 ACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS 374 (384)
T ss_dssp ----------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 111 13567 999988999999999999998863
No 90
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.32 E-value=7.6e-11 Score=130.00 Aligned_cols=266 Identities=11% Similarity=0.012 Sum_probs=165.5
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEe-cccchHHHHHHHHHcCceEEEecC-CCCCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYC-SKEAHSCVEKAAMMAFVRLKILEP-DDKNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~-S~~aH~Sv~Kaa~l~gv~v~~Vp~-d~~G~ 540 (891)
+++ +++|+++++..++.+....+ . .++-+++. +...|.++.+++...|.+++.+|. +.++.
T Consensus 61 ~v~--~~~g~t~al~~~~~~~~~~~----~-----------~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 123 (385)
T 2bkw_A 61 PFV--LAGSGTLGWDIFASNFILSK----A-----------PNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGES 123 (385)
T ss_dssp EEE--EESCTTHHHHHHHHHHSCTT----C-----------SCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCSSTTSC
T ss_pred eEE--EcCchHHHHHHHHHHHhccC----C-----------CCCeEEEEcCCcchHHHHHHHHHcCCceEEEecCCCCCC
Confidence 455 78899999998887652100 0 11233444 455666766677778899999999 88999
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-------hcC----------CC--CccEEEEcCc
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-------SQG----------IE--YADSFNVNVN 590 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-------ldG----------i~--~aDSIs~d~H 590 (891)
+|+++|+++|++. ....++++ +..|+.. |+++ +|+ +. .+|.+++++|
T Consensus 124 ~d~~~l~~~l~~~---~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 200 (385)
T 2bkw_A 124 VPLELITEKLSQN---SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQ 200 (385)
T ss_dssp CCHHHHHHHHHHS---CCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESS
T ss_pred CCHHHHHHHHhcC---CCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCc
Confidence 9999999999862 11122222 2345543 4443 222 11 4799999999
Q ss_pred ccCCcccccEEEEEeCCccchhhhc-----cCCCccccCCCCCccccCCc----c-ccccc-ccchHHHHHHHHHHHhhH
Q psy852 591 KWLLTAFDSSCLWVADRYKLTSALV-----VDPLYLQHGHEGAIDYRHWG----I-PLSRR-FRSLKLWFVIRTYGLSGL 659 (891)
Q Consensus 591 K~L~~P~g~G~llvR~~~~L~~~l~-----~~~~Yl~~~~e~~~~~~~~t----i-~~SRr-~~aL~lW~~L~~lG~~G~ 659 (891)
||+++|.|+|+++++++. +.+.+. ....|.............+. . .++-. ...+.+..+++.+...++
T Consensus 201 K~~~~~~G~G~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~ 279 (385)
T 2bkw_A 201 KAIGAPAGLSISLCSSRF-MDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGL 279 (385)
T ss_dssp STTCCCSCEEEEEECHHH-HHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred cccccCCcceEEEEcHHH-HHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccH
Confidence 999999999999987652 220111 00011000000000000000 0 01111 122345566666666678
Q ss_pred HHHHHHHHHHHHHHHHHh-ccCCCcEEeCC-----CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc-cC
Q psy852 660 QKYIRRHCELAKLFEGKV-RRDPRFEISND-----VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ-EQ 732 (891)
Q Consensus 660 ~~~i~~~~~lA~~L~~~L-~~~~~~eil~~-----~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~-~g 732 (891)
.+..++..++++++.+.| ++. +++++.+ ...++++|++.+ .+++.+.|.+.|+.+..+... .+
T Consensus 280 ~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~gi~v~~g~~~~~~ 349 (385)
T 2bkw_A 280 HKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD---------PPDVIAFLKSHGVVIAGGIHKDIG 349 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC---------HHHHHHHHHHTTEECBCCCCTTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC---------HHHHHHHHHHCCeEEeCCCCcccC
Confidence 889999999999999999 887 7888752 136788898842 467888888889774433321 13
Q ss_pred CeEE-EE-ecC---CCCHHHHHHHHHHHHHHH
Q psy852 733 NDEV-FE-LQE---RKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 733 ~~~l-~s-v~~---~tT~edId~li~~L~ei~ 759 (891)
...+ ++ +.. .+|++|++++++.|+++.
T Consensus 350 ~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~ 381 (385)
T 2bkw_A 350 PKYIRIGHMGVTACNKNLPYMKNCFDLIKLAL 381 (385)
T ss_dssp GGEEEECCCGGGTSSTTCTHHHHHHHHHHHHT
T ss_pred CCEEEEEccccccccCCHHHHHHHHHHHHHHH
Confidence 4566 88 552 479999999999998765
No 91
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.30 E-value=6.6e-11 Score=130.45 Aligned_cols=278 Identities=12% Similarity=0.077 Sum_probs=168.9
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH--HHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S--v~Kaa~ 524 (891)
++.+.+++.+...+..+++. +++|+++++..++.+... . ++- |+++...+++ ....+.
T Consensus 56 ~~~~~la~~~g~~~~~~~i~-~~~ggt~al~~~~~~~~~----~--------------gd~-vi~~~~~~~~~~~~~~~~ 115 (376)
T 3f0h_A 56 ENEKFMLEYAKAPEGSKAVF-MTCSSTGSMEAVVMNCFT----K--------------KDK-VLVIDGGSFGHRFVQLCE 115 (376)
T ss_dssp HHHHHHHHHHTCCTTCEEEE-ESSCHHHHHHHHHHHHCC----T--------------TCC-EEEEESSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceEEE-EcCChhHHHHHHHHhccC----C--------------CCe-EEEEeCChhhHHHHHHHH
Confidence 34455666665433334441 477889999888765421 0 122 4444333333 223455
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCC---------
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGI--------- 579 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi--------- 579 (891)
..|.+++.+|.+.++.+|+++|++++++++ ..++++ +..|... |.++ +|++
T Consensus 116 ~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~----~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~ 191 (376)
T 3f0h_A 116 IHEIPYVALKLEHGKKLTKEKLYEYDNQNF----TGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFN 191 (376)
T ss_dssp HTTCCEEEEECCTTCCCCHHHHHTTTTSCC----CEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCC
T ss_pred HcCCceEEEeCCCCCCCCHHHHHHhhccCc----eEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccc
Confidence 678899999999999999999998765432 123332 3456554 5442 3321
Q ss_pred ---CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc--CCC-ccccCCCCCccccCCcccccccc-cchHHHHHHH
Q psy852 580 ---EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV--DPL-YLQHGHEGAIDYRHWGIPLSRRF-RSLKLWFVIR 652 (891)
Q Consensus 580 ---~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~--~~~-Yl~~~~e~~~~~~~~ti~~SRr~-~aL~lW~~L~ 652 (891)
..+|.+++++||++++|.|+|+++++++. + +.+.. ... |+...... ......+...+-.. ....+..+++
T Consensus 192 ~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~al~ 268 (376)
T 3f0h_A 192 MNECGADVMITGSQKVLACPPGISVIVLAPRG-V-ERVEKSKVRTMYFDLKDAL-KNQERGQTPFTPAVGILLQINERLK 268 (376)
T ss_dssp HHHHTCSEEEEETTTTTCCCSSCEEEEECHHH-H-HHHHTCCCCCSTTCHHHHH-HHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred ccccCccEEEecCcccccCCCceEEEEECHHH-H-HHhhcCCCCceeecHHHHH-hhcccCCCCCCCcHHHHHHHHHHHH
Confidence 12799999999999999999998887652 2 11211 111 11100000 00000000001111 1134566677
Q ss_pred HHHHh-hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc-eeEEEEEecCCcchhhhhhHHHHHHHHHhC-CcEEEeecc
Q psy852 653 TYGLS-GLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR-LGLVCFRLRSENNLIADQNNRKLLEDINAS-GRLHMVPAS 729 (891)
Q Consensus 653 ~lG~~-G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~-~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~~~s~s~ 729 (891)
.+... ++++..++..++++++.+.|++. ++++..+.. ..++.|...+. ...++.+.|.++ |+.+..+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~ 340 (376)
T 3f0h_A 269 EIKKHGGADAEVARIASQAADFRAKIKDL-PFELVSESPANGVTSVHPTTA-------NAYDIFLKLKDEYGIWICPNGG 340 (376)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEEEEEESSS-------CHHHHHHHHHHHSSEECEECCG
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccccCceEEEEeCCCC-------CHHHHHHHHHHhCCEEEecCcc
Confidence 66666 78999999999999999999986 577765433 34555554322 456788899887 887555433
Q ss_pred ccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 730 QEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 730 ~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
..+..++ ++++..+|++|++++++.|++++
T Consensus 341 ~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l 371 (376)
T 3f0h_A 341 EMKDTIFRVGHIGALTHEDNTTLVNAFKDLQ 371 (376)
T ss_dssp GGTTTCEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 3344566 99999999999999999999876
No 92
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.29 E-value=3.1e-11 Score=131.71 Aligned_cols=258 Identities=12% Similarity=0.090 Sum_probs=165.4
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHH--HH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA--AM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Ka--a~ 524 (891)
++.+++++.+.. .-+++ +++||++++..++.+++. +.-.|+++...|++...+ +.
T Consensus 47 ~l~~~la~~~g~--~~~v~--~~~~gt~a~~~al~~~~~-------------------~gd~vi~~~~~~~~~~~~~~~~ 103 (356)
T 1v72_A 47 QVKRKFCEIFER--DVEVF--LVPTGTAANALCLSAMTP-------------------PWGNIYCHPASHINNDECGAPE 103 (356)
T ss_dssp HHHHHHHHHHTS--CCEEE--EESCHHHHHHHHHHTSCC-------------------TTEEEEECTTSHHHHSSTTHHH
T ss_pred HHHHHHHHHhCC--CCcEE--EeCCccHHHHHHHHHhcC-------------------CCCEEEEcCccchhhhhchHHH
Confidence 344455555552 22455 678999999888776432 123578888899998776 66
Q ss_pred Hc--CceEEEecCCCCCCcCHHHHHH-HHHhhh-hcCCcc--EEEEe--cCCccc-----------hhhh-----hc---
Q psy852 525 MA--FVRLKILEPDDKNSLRGATLRQ-VMQQDE-TMGYIP--FFVST--TLGTTS-----------CYRK-----SQ--- 577 (891)
Q Consensus 525 l~--gv~v~~Vp~d~~G~mD~~~Le~-aI~~d~-~~g~ip--~~Vva--taGTT~-----------c~~~-----ld--- 577 (891)
.. |.+++.+|.+ ++.+|+++|++ +|++.. ..+..+ ++++. +.|.+. |.++ +|
T Consensus 104 ~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~ 182 (356)
T 1v72_A 104 FFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSR 182 (356)
T ss_dssp HHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred HHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchh
Confidence 55 8899999986 58999999999 887521 111122 22332 245522 3321 11
Q ss_pred --------C-----C---CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc
Q psy852 578 --------G-----I---EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR 641 (891)
Q Consensus 578 --------G-----i---~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr 641 (891)
| + ..+|.+++++||+ +.|.|+|+++.+ ++.+.. +. ++... .+ ++. +
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~-~~~~~~-~~----~~~~~-------~~-~~~-~-- 244 (356)
T 1v72_A 183 FANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFN-TSLATE-MS----YRRKR-------AG-HLS-S-- 244 (356)
T ss_dssp HHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESS-GGGHHH-HH----HHHHH-------TT-CCC-S--
T ss_pred hHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEEC-HHHHhh-HH----HHhhc-------cC-chh-h--
Confidence 1 1 2689999999999 669988888774 333221 11 01000 00 000 0
Q ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCC
Q psy852 642 FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASG 721 (891)
Q Consensus 642 ~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G 721 (891)
...+.+...++.+....+.+.+++..++++++.+.|++++++++..++..+.+++++. ..+.+.|.++|
T Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~g 313 (356)
T 1v72_A 245 KMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----------SAMIDALLKAG 313 (356)
T ss_dssp STHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----------HHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----------HHHHHHHHhcC
Confidence 0011222233444334566778888999999999999988999887777788888873 25778888889
Q ss_pred cEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 722 RLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 722 ~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.+..+. .. ...+ ++++..+|++|++++++.|++++
T Consensus 314 i~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l 350 (356)
T 1v72_A 314 FGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAA 350 (356)
T ss_dssp CBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC
T ss_pred eEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 8754333 22 4566 99888999999999999998765
No 93
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.29 E-value=1.2e-10 Score=129.35 Aligned_cols=160 Identities=13% Similarity=0.087 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSL 109 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~ 109 (891)
.+.+...+...+-+ ....|...+...+++..+.+++++.+|++.+. +.+ .++
T Consensus 45 ~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-------------~~v--------------~~~ 96 (388)
T 1j32_A 45 PKHIVEAAKAALEQ-GKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-------------DNI--------------LVT 96 (388)
T ss_dssp CHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EEE
T ss_pred CHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-------------hhE--------------EEc
Confidence 35554444433322 22223333446799999999999999975321 001 135
Q ss_pred cchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC--CCcccHHHHHHHHH
Q psy852 110 GGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNSLRGATLRQVMQ 187 (891)
Q Consensus 110 ~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~--~g~id~~~L~~~l~ 187 (891)
+||+......+..+ . . +...|+++..+|+++..++...|.+++.|+.++ ++.+|+++|++.++
T Consensus 97 ~g~~~a~~~~~~~~-~-~-------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 161 (388)
T 1j32_A 97 NGGKQSIFNLMLAM-I-E-------------PGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT 161 (388)
T ss_dssp SHHHHHHHHHHHHH-C-C-------------TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC
T ss_pred CCHHHHHHHHHHHh-c-C-------------CCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcC
Confidence 67764333222222 1 1 112477888899999988887788999999885 57899999999886
Q ss_pred hhhhcCCcceEEEeecccCccccc---cCHHHHHHHHHHcCCceeeeccccCCc
Q psy852 188 QDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 188 ~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+. +.+|+++..+|.+|.+ +++++|+++|+++|+++++|.+|+++.
T Consensus 162 ~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 209 (388)
T 1j32_A 162 PK------TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKIL 209 (388)
T ss_dssp TT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred cC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcc
Confidence 53 3466777789999999 559999999999999999999997643
No 94
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.29 E-value=1.6e-09 Score=122.71 Aligned_cols=88 Identities=13% Similarity=0.017 Sum_probs=74.2
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++...|.++..++...+.+++.++ .+|+++|++.+++... ..+.+|+++..+|.+|.+.|+++|+++|++
T Consensus 150 ~vl~~~~~h~~~~~~~~~~g~~~~~~~-----~~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~ 222 (427)
T 2w8t_A 150 YVILDADSHASIYDGCQQGNAEIVRFR-----HNSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKK 222 (427)
T ss_dssp EEEEETTCCHHHHHHHHHSCSEEEEEC-----TTCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHcCCeeEEeC-----CCCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHH
Confidence 478889999999999988888888887 3699999999976321 135688888888999999999999999999
Q ss_pred cCCceeeeccccCCc
Q psy852 224 FDVWLHVDGAYAGSS 238 (891)
Q Consensus 224 ~~~~lHvDaA~GG~~ 238 (891)
+|+++++|.|++++.
T Consensus 223 ~g~~li~Dea~~~~~ 237 (427)
T 2w8t_A 223 HGAMVLVDEAHSMGF 237 (427)
T ss_dssp TTCEEEEECTTTTTT
T ss_pred cCCEEEEECCccccc
Confidence 999999999996643
No 95
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.28 E-value=4.4e-11 Score=133.49 Aligned_cols=272 Identities=11% Similarity=0.054 Sum_probs=166.3
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH-
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM- 525 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l- 525 (891)
++.+.+++.+...+. +++ +++|+++++..++.+.+... .+...|+++..+|.+...++..
T Consensus 73 ~l~~~la~~~g~~~~-~v~--~~~g~t~al~~~~~~l~~~~----------------~~gd~vi~~~~~~~~~~~~~~~~ 133 (406)
T 3cai_A 73 AAREAVADLVNADPG-GVV--LGADRAVLLSLLAEASSSRA----------------GLGYEVIVSRLDDEANIAPWLRA 133 (406)
T ss_dssp HHHHHHHHHHTCCGG-GEE--EESCHHHHHHHHHHHTGGGG----------------BTTCEEEEETTSCGGGTHHHHHH
T ss_pred HHHHHHHHHhCCCCC-eEE--EeCChHHHHHHHHHHHhhcc----------------CCCCEEEEcCCccHHHHHHHHHH
Confidence 344455666654333 555 68899988877665431100 1223588888899887666543
Q ss_pred ---cCceEEEecCC-CCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCC------
Q psy852 526 ---AFVRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGI------ 579 (891)
Q Consensus 526 ---~gv~v~~Vp~d-~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi------ 579 (891)
.|.+++.+|.+ ++|.+|+++|+++|++++ ..++++. ..|+.. |.++ +|++
T Consensus 134 ~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~~~~----~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~ 209 (406)
T 3cai_A 134 AHRYGAKVKWAEVDIETGELPTWQWESLISKST----RLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYR 209 (406)
T ss_dssp HHHHBCEEEEECCCTTTCCCCGGGHHHHCCTTE----EEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTC
T ss_pred HHhcCCeEEEEecCcccCCcCHHHHHHHhCCCc----eEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCC
Confidence 58899999998 789999999999997532 1222322 234443 4431 2221
Q ss_pred ------CCccEEEEcCcccCCcccccE-EEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccc-hHHHHHH
Q psy852 580 ------EYADSFNVNVNKWLLTAFDSS-CLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRS-LKLWFVI 651 (891)
Q Consensus 580 ------~~aDSIs~d~HK~L~~P~g~G-~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~a-L~lW~~L 651 (891)
..+|.+++++|||++ |. +| +++++++ +.+.+.....+.... ....+. .++-...+ ..+-.++
T Consensus 210 ~~~~~~~~~d~~~~s~~K~~g-~~-~G~~~~~~~~--~~~~l~~~~~~~~~~-----~~~~~~-~~t~~~~~~~a~~~al 279 (406)
T 3cai_A 210 LLDIRETDADVVTVNAHAWGG-PP-IGAMVFRDPS--VMNSFGSVSTNPYAT-----GPARLE-IGVHQFGLLAGVVASI 279 (406)
T ss_dssp CCCHHHHCCSEEEEEGGGGTS-CS-CEEEEESCHH--HHHTSCCCCSCTTCC-----GGGGGC-CSCCCHHHHHHHHHHH
T ss_pred CCCchhcCCCEEEeehhhhcC-CC-cCeEEEEehH--HHhhcCCcccCCCCC-----cccccc-CCCccHHHHHHHHHHH
Confidence 137999999999876 75 88 7777653 222221110010000 000000 01111111 1223344
Q ss_pred HHHHHh--------------hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC--ceeEEEEEecCCcchhhhhhHHHHHH
Q psy852 652 RTYGLS--------------GLQKYIRRHCELAKLFEGKVRRDPRFEISNDV--RLGLVCFRLRSENNLIADQNNRKLLE 715 (891)
Q Consensus 652 ~~lG~~--------------G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~--~~~iV~Fr~~~~~~~~~d~ln~~L~~ 715 (891)
+.+... .+++..++..++++++.+.|++.+++++..+. ..++++|++.+. ...++.+
T Consensus 280 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 352 (406)
T 3cai_A 280 EYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKV-------PADRVVQ 352 (406)
T ss_dssp HHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTB-------CHHHHHH
T ss_pred HHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCc-------CHHHHHH
Confidence 443322 47788888899999999999998899887653 466899998632 3567888
Q ss_pred HHHhCCcEEEeec------c--c-cCCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 716 DINASGRLHMVPA------S--Q-EQNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 716 ~L~~~G~~~~s~s------~--~-~g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
.|.+.|+....+. . . .+...+ ++++..+|++||+++++.|+++
T Consensus 353 ~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 353 RLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred HHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 8888898755443 1 1 123556 9999999999999999998753
No 96
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.28 E-value=1.6e-10 Score=127.81 Aligned_cols=160 Identities=12% Similarity=-0.001 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
..|.+...+...+-+ ....+. +...+++..+.+++++.+|++... +.+ .+
T Consensus 41 ~~~~v~~a~~~~~~~-~~~~y~--~~~~~l~~~la~~l~~~~g~~~~~-------------~~i--------------~~ 90 (391)
T 3dzz_A 41 IAPEIMASMEEKLKV-AAFGYE--SVPAEYYKAVADWEEIEHRARPKE-------------DWC--------------VF 90 (391)
T ss_dssp CCHHHHHHHHHHHTT-CCCCCB--CCCHHHHHHHHHHHHHHHSCCCCG-------------GGE--------------EE
T ss_pred CCHHHHHHHHHHHhc-CcCCCC--CCCHHHHHHHHHHHHHHhCCCCCH-------------HHE--------------EE
Confidence 446666655554433 222222 225789999999999999965331 111 14
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecC-CC--CcccHHHHHHH
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD-DK--NSLRGATLRQV 185 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-~~--g~id~~~L~~~ 185 (891)
++||+...++.+..+ .. +...|+++..+|.++..++...+.+++.++.+ ++ +.+|+++|+++
T Consensus 91 ~~g~~~a~~~~~~~l--~~-------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~ 155 (391)
T 3dzz_A 91 ASGVVPAISAMVRQF--TS-------------PGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEK 155 (391)
T ss_dssp ESCHHHHHHHHHHHH--SC-------------TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHH
T ss_pred CCCHHHHHHHHHHHh--CC-------------CCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHH
Confidence 567764433322222 11 12248888999999999988888899999985 33 34999999999
Q ss_pred HHhhhhcCCcceEEEeecccCccccc---cCHHHHHHHHHHcCCceeeeccccCCc
Q psy852 186 MQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 186 l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+++.. +.+|+++..+|.+|.+ +++++|+++|+++|+++++|.+|+++.
T Consensus 156 l~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 206 (391)
T 3dzz_A 156 LATPS-----VRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLV 206 (391)
T ss_dssp HTSTT-----EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred HhccC-----ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence 97321 4567778889999999 899999999999999999999996544
No 97
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.27 E-value=1.7e-10 Score=128.13 Aligned_cols=83 Identities=11% Similarity=0.018 Sum_probs=72.2
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCC-CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~-g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++..+|+++..++...|.+++.+++|++ +.+|+++|++++++. +.+|+ .++.+|.+.|+++|+++|+
T Consensus 80 ~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~la~ 150 (388)
T 1b9h_A 80 EVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPR------TKVIM---PVHMAGLMADMDALAKISA 150 (388)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcC------ceEEE---EeCCccCcCCHHHHHHHHH
Confidence 4888899999999988878889999999875 899999999988643 23444 6888999999999999999
Q ss_pred HcCCceeeecccc
Q psy852 223 EFDVWLHVDGAYA 235 (891)
Q Consensus 223 ~~~~~lHvDaA~G 235 (891)
++|++||+|+|++
T Consensus 151 ~~~~~li~D~a~~ 163 (388)
T 1b9h_A 151 DTGVPLLQDAAHA 163 (388)
T ss_dssp HHTCCBCEECTTC
T ss_pred HcCCEEEEecchh
Confidence 9999999999994
No 98
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.26 E-value=1.1e-10 Score=135.71 Aligned_cols=158 Identities=13% Similarity=0.017 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHhcCCCCC-----c-cccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCC
Q psy852 29 SYPSVLADMLSDAIGCIGF-----S-WAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTP 102 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~-----~-~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~ 102 (891)
..|.++..|...+.|..+. . +...+...++|..+.+++++++|.+..+.. ..
T Consensus 66 ~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~-----~~----------------- 123 (490)
T 2a7v_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWG-----VN----------------- 123 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEE-----EE-----------------
T ss_pred CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCc-----eE-----------------
Confidence 4577777777766654421 1 223455579999999999999999864210 00
Q ss_pred CCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChH------HHH--HHHHcCC--eEEEEecC
Q psy852 103 ANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSC------VEK--AAMMAFV--RLKILEPD 172 (891)
Q Consensus 103 ~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~S------v~k--aa~~~~~--~v~~V~~d 172 (891)
.++++|+..++..+..+ -+ +.-.|+++..+|.+ +.. .+.+.+. +++.+++|
T Consensus 124 ----v~~~sGt~An~~al~al--~~-------------pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd 184 (490)
T 2a7v_A 124 ----VQPYSGSPANLAVYTAL--LQ-------------PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 184 (490)
T ss_dssp ----CCCSSHHHHHHHHHHHH--CC-------------SCEECCC-------------------------------CCBC
T ss_pred ----EeCCchHHHHHHHHHHH--cC-------------CCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccc
Confidence 12357775443333333 11 12235565555543 211 2223333 34455566
Q ss_pred -CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccc
Q psy852 173 -DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 173 -~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~ 234 (891)
++|.+|+++|++.+.+.. |-+|++ +++..|.+.|+++|+++|+++|+++|+|+|+
T Consensus 185 ~~~~~iD~d~le~~l~~~~-----~klIi~--~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah 240 (490)
T 2a7v_A 185 PKTGLIDYNQLALTARLFR-----PRLIIA--GTSAYARLIDYARMREVCDEVKAHLLADMAH 240 (490)
T ss_dssp TTTCSBCHHHHHHHHHHHC-----CSEEEE--CCSSCCSCCCHHHHHHHHHHTTCEEEEECGG
T ss_pred cccCCcCHHHHHHHHhhcC-----CcEEEE--cCCCCCCcccHHHHHHHHHHcCCEEEEcccc
Confidence 579999999999997542 334443 3455678889999999999999999999987
No 99
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.25 E-value=7.7e-11 Score=132.79 Aligned_cols=84 Identities=11% Similarity=0.116 Sum_probs=71.4
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++..+|.+...++...|.+++.+++++ ++.+|+++|++.+++. +.+|++ ++.+|.+.|+++|.++|+
T Consensus 84 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~---~~~~G~~~~~~~i~~~~~ 154 (418)
T 2c81_A 84 EVIVPSLTWIATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITDK------TKAIIP---VHLFGSMANMDEINEIAQ 154 (418)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCTT------EEEECC---BCCTTCCCCHHHHHHHHH
T ss_pred EEEECCCccHhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCCC------CeEEEE---eCCcCCcccHHHHHHHHH
Confidence 488889999999999888888999999986 7899999999888653 234443 457899999999999999
Q ss_pred HcCCceeeeccccC
Q psy852 223 EFDVWLHVDGAYAG 236 (891)
Q Consensus 223 ~~~~~lHvDaA~GG 236 (891)
++|++|++|+|++.
T Consensus 155 ~~~~~li~D~a~~~ 168 (418)
T 2c81_A 155 EHNLFVIEDCAQSH 168 (418)
T ss_dssp HTTCEEEEECTTCT
T ss_pred HCCCEEEEECcccc
Confidence 99999999999954
No 100
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.24 E-value=6.9e-11 Score=130.37 Aligned_cols=83 Identities=6% Similarity=0.087 Sum_probs=72.1
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|++...++...|.+++.+++++++.+|+++|++.+++. +.+|+ .++.+|.+.|+++|+++|++
T Consensus 80 ~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~~~i~~~~~~ 150 (374)
T 3uwc_A 80 EVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADMPALAKIAKK 150 (374)
T ss_dssp EEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCHHHHHHHHHH
Confidence 4888899999999998888889999999989999999999988653 23444 67899999999999999999
Q ss_pred cCCceeeecccc
Q psy852 224 FDVWLHVDGAYA 235 (891)
Q Consensus 224 ~~~~lHvDaA~G 235 (891)
+|+++++|.|++
T Consensus 151 ~~~~li~D~~~~ 162 (374)
T 3uwc_A 151 HNLHIVEDACQT 162 (374)
T ss_dssp TTCEEEEECTTC
T ss_pred cCCEEEEeCCCc
Confidence 999999999884
No 101
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.24 E-value=2.5e-10 Score=129.00 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=67.6
Q ss_pred EEEecCCCChHHHHHHH----HcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAM----MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~----~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.++...+. ..+.+++.+++| +++|++.+++. +.+|+++..+|.+|.+.|+++|++
T Consensus 97 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~ 164 (412)
T 2cb1_A 97 EVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE------PEAVREALSAK------TRAVFVETVANPALLVPDLEALAT 164 (412)
T ss_dssp EEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS------HHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC------HHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHH
Confidence 47888899999877653 256788888875 88898888653 457888999999999999999999
Q ss_pred HHHHcCCceeeeccccC
Q psy852 220 VAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG 236 (891)
+|+++|+++|+|++|++
T Consensus 165 l~~~~~~~li~D~~~~~ 181 (412)
T 2cb1_A 165 LAEEAGVALVVDNTFGA 181 (412)
T ss_dssp HHHHHTCEEEEECGGGT
T ss_pred HHHHcCCEEEEECCCcc
Confidence 99999999999999854
No 102
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.23 E-value=4.2e-10 Score=125.81 Aligned_cols=236 Identities=12% Similarity=0.088 Sum_probs=145.4
Q ss_pred cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc
Q psy852 51 ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI 130 (891)
Q Consensus 51 ~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~ 130 (891)
..+...++|..+.+++++++|.+.... ..++|+ +.+...+... ..
T Consensus 65 ~~~~~~~~~~~~~~~la~~~g~~~~~i------------------------------~~~sGt-~a~~~~~~~~-~~--- 109 (417)
T 3n0l_A 65 GCEFVDEIETLAIERCKKLFNCKFANV------------------------------QPNSGS-QANQGVYAAL-IN--- 109 (417)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEEC------------------------------CCSSHH-HHHHHHHHHH-SC---
T ss_pred cchHHHHHHHHHHHHHHHHhCCCCcce------------------------------EeccHH-HHHHHHHHHh-cC---
Confidence 346678999999999999999865421 123455 4433332222 11
Q ss_pred CCccccccccCCeEEEecCCCChHHHH---HHHH--cCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeeccc
Q psy852 131 HPFVDEGVLLSKLMAYCSKEAHSCVEK---AAMM--AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGT 205 (891)
Q Consensus 131 ~~~~~~g~~~~~~~v~~S~~~H~Sv~k---aa~~--~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gt 205 (891)
+...|+++..+|.+... .+.. .+..++.++++++|.+|+++|++.+++.. |.+|+++.++
T Consensus 110 ----------~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~ 174 (417)
T 3n0l_A 110 ----------PGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEK-----PKLIVCGASA 174 (417)
T ss_dssp ----------TTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHC-----CSEEEECCSS
T ss_pred ----------CCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcC-----CeEEEECCcc
Confidence 12247777888877655 2222 23456777888889999999999998432 3466666666
Q ss_pred CccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHH
Q psy852 206 TSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQA 285 (891)
Q Consensus 206 t~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~ 285 (891)
+ |.+.|+++|+++|+++|+++++|.|++......
T Consensus 175 ~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-------------------------------------------- 208 (417)
T 3n0l_A 175 Y--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVA-------------------------------------------- 208 (417)
T ss_dssp C--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT--------------------------------------------
T ss_pred c--CccCCHHHHHHHHHHcCCEEEEECccchhhhhc--------------------------------------------
Confidence 4 999999999999999999999999862111000
Q ss_pred HhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEEE
Q psy852 286 ISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFN 365 (891)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~ 365 (891)
+.+ + ..+..+|.++
T Consensus 209 -----------------------------------------------------~~~-------~------~~~~~~di~~ 222 (417)
T 3n0l_A 209 -----------------------------------------------------GEH-------P------SPFPYAHVVS 222 (417)
T ss_dssp -----------------------------------------------------TSS-------C------CCTTTCSEEE
T ss_pred -----------------------------------------------------ccC-------C------CccccceEEE
Confidence 000 0 0011368999
Q ss_pred EeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCcccccccccCCCCCh-hHHHHHHHHHHhcHHHHHHHHHH
Q psy852 366 VNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRF-RSLKLWFVIRTYGLSGLQKYIRR 444 (891)
Q Consensus 366 ~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~sr~~-~~l~~w~~l~~~g~~G~~~ii~~ 444 (891)
.++||++.+|.+ |+++.+++.... .+.. ...+ +..++-.. ...+++.++.....+++.++.++
T Consensus 223 ~s~sK~l~g~~~-G~~~~~~~~~~~-~~~~---~~~~-----------~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~ 286 (417)
T 3n0l_A 223 STTHKTLRGPRG-GIIMTNDEELAK-KINS---AIFP-----------GIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQ 286 (417)
T ss_dssp EESSTTTCSCSC-EEEEESCHHHHH-HHHH---HHTT-----------TTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred eeCccccCCCCe-eEEEECCHHHHH-HHhh---hhCC-----------cccCCcHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 999999888874 777776432221 1110 0000 01112122 33456667777667888999999
Q ss_pred HHHHHHHHHHhhccCCccccc
Q psy852 445 HCELAKLFEGKVRRDPRFEIS 465 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv 465 (891)
..++++++.+.|.+ .+++++
T Consensus 287 ~~~~~~~l~~~L~~-~g~~~~ 306 (417)
T 3n0l_A 287 VRTNAQVLANVLMD-RKFKLV 306 (417)
T ss_dssp HHHHHHHHHHHHHH-TTCEEG
T ss_pred HHHHHHHHHHHHHh-CCceec
Confidence 99999999999987 666665
No 103
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.22 E-value=1.8e-10 Score=128.47 Aligned_cols=275 Identities=9% Similarity=-0.020 Sum_probs=161.8
Q ss_pred HHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHH--HHHHHHc
Q psy852 449 AKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCV--EKAAMMA 526 (891)
Q Consensus 449 Ar~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv--~Kaa~l~ 526 (891)
++.+++.+... . +++ +++|||+++..++... . +.-.|+++..+|++. ...+...
T Consensus 41 ~~~l~~~~~~~-~-~v~--~~~sgt~a~~~~~~~~-----~---------------~gd~vi~~~~~~~~~~~~~~~~~~ 96 (379)
T 3ke3_A 41 LSNLKTVYNAE-A-AVI--IPGSGTYGMEAVARQL-----T---------------IDEDCLIIRNGWFSYRWTQILEKG 96 (379)
T ss_dssp HHHHHHHHTCS-E-EEE--EESCHHHHHHHHHHHH-----C---------------TTCEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-C-EEE--EcCChhHHHHHHHHhC-----C---------------CCCeEEEEeCCchhHHHHHHHHHh
Confidence 34555555443 2 455 6789999988865321 1 111356666666653 2333333
Q ss_pred C--ceEEEecCCCC---------CCcCHHHHHHHHHhhhhcCCccEE--EEecCCccc-----------hhh-----hhc
Q psy852 527 F--VRLKILEPDDK---------NSLRGATLRQVMQQDETMGYIPFF--VSTTLGTTS-----------CYR-----KSQ 577 (891)
Q Consensus 527 g--v~v~~Vp~d~~---------G~mD~~~Le~aI~~d~~~g~ip~~--VvataGTT~-----------c~~-----~ld 577 (891)
| .+++.+|.+.+ +.+|+++|+++|++... ...++ +.+..|... |++ ++|
T Consensus 97 g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~--~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D 174 (379)
T 3ke3_A 97 KFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKS--AIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVID 174 (379)
T ss_dssp CCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTC--SEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCC--cEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 3 47888887542 37999999999965311 11111 223356543 333 245
Q ss_pred CCC-----------CccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-C--CCccccCC-C---CCccccCCccccc
Q psy852 578 GIE-----------YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-D--PLYLQHGH-E---GAIDYRHWGIPLS 639 (891)
Q Consensus 578 Gi~-----------~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~--~~Yl~~~~-e---~~~~~~~~ti~~S 639 (891)
++. .+|.+++++|||+++|.|+|+++++++. + +.+.. . ..|+.... . ..+..+.....++
T Consensus 175 ~~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t 252 (379)
T 3ke3_A 175 CIASGCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAA-I-KKVESTESNCFSLDLKQWLTIMRAYENGGHAYHAT 252 (379)
T ss_dssp CTTCTTCCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHH-H-HHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSC
T ss_pred ecccCCccccccccCCCEEEecchhhcCCCCceEEEEECHHH-H-HhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCC
Confidence 442 5899999999999999999999998652 1 11211 1 11110000 0 0000000000011
Q ss_pred cc-ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC--cee-EEEEEecCCcchhhhhhHHHHHH
Q psy852 640 RR-FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV--RLG-LVCFRLRSENNLIADQNNRKLLE 715 (891)
Q Consensus 640 Rr-~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~--~~~-iV~Fr~~~~~~~~~d~ln~~L~~ 715 (891)
-. .....+-.+++.+..+|++++.++..+++++|.+.|++. +++++.++ ..+ ++.|...+. .....+
T Consensus 253 ~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~~--------~~~~~~ 323 (379)
T 3ke3_A 253 MPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTERD--------DMHKGS 323 (379)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSCH--------HHHSSH
T ss_pred CCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCCc--------chHHHH
Confidence 11 112234466676777889999999999999999999987 78876554 244 445554211 112256
Q ss_pred HHHhCCcEEEeeccc-----cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 716 DINASGRLHMVPASQ-----EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 716 ~L~~~G~~~~s~s~~-----~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.|.+.|+++..+... .+...+ ++++.++|++|||+++++|+++.+
T Consensus 324 ~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~ 374 (379)
T 3ke3_A 324 AFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALD 374 (379)
T ss_dssp HHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHH
Confidence 778889875443321 124567 999988899999999999998874
No 104
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.22 E-value=7.9e-11 Score=130.36 Aligned_cols=83 Identities=14% Similarity=0.159 Sum_probs=71.6
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecC-CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++..+|+++..++...|.+++.+++| +++.+|+++|++++++. +.+|+ .++.+|.+.|+++|.++|+
T Consensus 78 ~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~~l~~i~~l~~ 148 (373)
T 3frk_A 78 EVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEK------TKAII---AVHLYGQPADMDEIKRIAK 148 (373)
T ss_dssp EEEEETTSCTHHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCTT------EEEEE---EECCTTCCCCHHHHHHHHH
T ss_pred EEEECCCCcHHHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCCC------CeEEE---EECCCcCcccHHHHHHHHH
Confidence 48889999999999987778899999998 67899999999988653 23444 5678999999999999999
Q ss_pred HcCCceeeecccc
Q psy852 223 EFDVWLHVDGAYA 235 (891)
Q Consensus 223 ~~~~~lHvDaA~G 235 (891)
++|+++++|+|++
T Consensus 149 ~~~~~li~D~a~~ 161 (373)
T 3frk_A 149 KYNLKLIEDAAQA 161 (373)
T ss_dssp HHTCEEEEECTTC
T ss_pred HcCCEEEEECCcc
Confidence 9999999999984
No 105
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.22 E-value=1.1e-09 Score=122.19 Aligned_cols=84 Identities=14% Similarity=0.062 Sum_probs=71.6
Q ss_pred eEEEecCCCChHHHHHHHHcCCeEEEEecCCC-CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHH
Q psy852 143 LMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVA 221 (891)
Q Consensus 143 ~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~-g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~ 221 (891)
..|+++..+|.++..++...|.+++.+++|++ +.+|+++|++.+++. +.+|+++ +.+|..+|+++|+++|
T Consensus 81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~~g~~~~~~~i~~l~ 151 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTDS------TKAILTV---NLLGNPNNFDEINKII 151 (390)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCTT------EEEEEEE---CGGGCCCCHHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCcC------CeEEEEE---CCccChhhHHHHHHHH
Confidence 35888899999999998878889999999876 999999999988653 2355554 4678899999999999
Q ss_pred HHcCCceeeecccc
Q psy852 222 KEFDVWLHVDGAYA 235 (891)
Q Consensus 222 ~~~~~~lHvDaA~G 235 (891)
+++|+++|+|+|++
T Consensus 152 ~~~~~~li~D~a~~ 165 (390)
T 3b8x_A 152 GGRDIILLEDNCES 165 (390)
T ss_dssp TTSCCEEEEECTTC
T ss_pred HHcCCEEEEECcCc
Confidence 99999999999995
No 106
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.22 E-value=3.2e-10 Score=124.57 Aligned_cols=266 Identities=12% Similarity=0.098 Sum_probs=167.9
Q ss_pred HHHHH-HHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 447 ELAKL-FEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 447 elAr~-l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
++.+. +++.+... .++ +++|+++++..++.++.. +.-.|+++..+|++...++..
T Consensus 57 ~l~~~~la~~~~~~---~v~--~~~g~t~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~ 112 (371)
T 2e7j_A 57 DFIHNQLPKFLGCD---VAR--VTNGAREAKFAVMHSLAK-------------------KDAWVVMDENCHYSSYVAAER 112 (371)
T ss_dssp HHHHTHHHHHTTSS---EEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCC---EEE--EeCChHHHHHHHHHHHhC-------------------CCCEEEEccCcchHHHHHHHH
Confidence 34445 55555542 566 788999999988877521 123589999999999999988
Q ss_pred cCceEEEec--CCCCCCcCHHHHHHHHHhhhhcCCccEEEEec----CCccc--------hhhh-----hcC-----C--
Q psy852 526 AFVRLKILE--PDDKNSLRGATLRQVMQQDETMGYIPFFVSTT----LGTTS--------CYRK-----SQG-----I-- 579 (891)
Q Consensus 526 ~gv~v~~Vp--~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat----aGTT~--------c~~~-----ldG-----i-- 579 (891)
.|.+++.+| .++++.+|+++|+++|++.......-++++.+ .|... |.++ +|. .
T Consensus 113 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~ 192 (371)
T 2e7j_A 113 AGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMP 192 (371)
T ss_dssp TTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBC
T ss_pred cCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCC
Confidence 999999999 88889999999999998643211222222222 34443 4331 221 1
Q ss_pred -----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-CCCccccCCCCCccccCCcccccccccchHHHHHHHH
Q psy852 580 -----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRT 653 (891)
Q Consensus 580 -----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~ 653 (891)
-.+|.++.++|||+++|.++|+++++++. +...+.. ...|... .....++.. ......+..+++.
T Consensus 193 ~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~---~~~~~a~~~~l~~ 263 (371)
T 2e7j_A 193 VSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEW-AEIVLRRSEKYKNKE-----VELLGCTAR---GATIITLMASFPH 263 (371)
T ss_dssp CCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTT-TTTTTCBCSSCTTSB-----GGGTTCCCC---SHHHHHHHHHHHH
T ss_pred CChhhcCCCEEEecCCcCCCCCCCcEEEEEechh-hhhhccccccCcccc-----cccccCCcC---HHHHHHHHHHHHH
Confidence 13699999999999999999999998752 1110111 1111110 000000100 1111222334443
Q ss_pred HHHhhHHHHHHHH--HHHHHHHHHHhccCCCcEEeCCC--ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc
Q psy852 654 YGLSGLQKYIRRH--CELAKLFEGKVRRDPRFEISNDV--RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS 729 (891)
Q Consensus 654 lG~~G~~~~i~~~--~~lA~~L~~~L~~~~~~eil~~~--~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~ 729 (891)
+.. +..++. .++++++.+.|++. +++++.++ ..++++|++. ...++.+.|.+.|+... +..
T Consensus 264 ~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~~~-~~~ 328 (371)
T 2e7j_A 264 VRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE---------VLYEISKKAKGGRFFLY-REL 328 (371)
T ss_dssp HHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH---------HHHHHHHHSSSGGGHHH-HHH
T ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC---------CHHHHHHHHHHCCEEEE-ecc
Confidence 332 455666 78999999999887 88887654 4678888874 23567777777787632 211
Q ss_pred --c-----cCCeEE-EEecCC-CCHHHHHHHHHHHHHHHH
Q psy852 730 --Q-----EQNDEV-FELQER-KRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 730 --~-----~g~~~l-~sv~~~-tT~edId~li~~L~ei~~ 760 (891)
. ....+. ++++.. ++++|++++++.|+++.+
T Consensus 329 ~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~ 368 (371)
T 2e7j_A 329 KSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIE 368 (371)
T ss_dssp HHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHH
Confidence 1 123445 778877 899999999999998763
No 107
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.21 E-value=1.1e-10 Score=129.92 Aligned_cols=273 Identities=10% Similarity=0.086 Sum_probs=172.4
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+... +++ ++++|++++..++.+++. .+.-.|+++..+|.+...++...
T Consensus 60 ~l~~~la~~~~~~---~~i--~~~~gt~al~~~l~~~~~------------------~~gd~vl~~~~~~~~~~~~~~~~ 116 (391)
T 3dr4_A 60 EFEKAFADYCGVK---HAI--ACNNGTTALHLALVAMGI------------------GPGDEVIVPSLTYIASANSVTYC 116 (391)
T ss_dssp HHHHHHHHHHTCS---EEE--EESSHHHHHHHHHHHHTC------------------CTTCEEEEESSSCTHHHHHHHHT
T ss_pred HHHHHHHHHhCCC---cEE--EeCCHHHHHHHHHHHcCC------------------CCcCEEEECCCchHHHHHHHHHC
Confidence 3444555555442 334 567889999988876521 01235888999999999999989
Q ss_pred CceEEEecCC-CCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcC--------------
Q psy852 527 FVRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQG-------------- 578 (891)
Q Consensus 527 gv~v~~Vp~d-~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldG-------------- 578 (891)
|.+++.+|++ +++.+|+++|+++++++++ .+++++..|... |.++ +|.
T Consensus 117 g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~----~v~~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~ 192 (391)
T 3dr4_A 117 GATPVLVDNDPRTFNLDAAKLEALITPRTK----AIMPVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSG 192 (391)
T ss_dssp TCEEEEECBCTTTCSBCGGGSGGGCCTTEE----EECCBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETT
T ss_pred CCEEEEEecCccccCcCHHHHHHhcCCCce----EEEEECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeec
Confidence 9999999998 5789999999998875321 233445556654 4331 121
Q ss_pred -CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHh
Q psy852 579 -IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLS 657 (891)
Q Consensus 579 -i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~ 657 (891)
+..++.+++++||+++++ ..|+++.+++......-.......... ..+ +....+..++...+..++......
T Consensus 193 ~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~--~~~----~~~~~g~~~~~~~l~aa~~~~~~~ 265 (391)
T 3dr4_A 193 SLGDCATFSFFGNAIITTG-EGGMITTNDDDLAAKMRLLRGQGMDPN--RRY----WFPIVGFNYRMTNIQAAIGLAQLE 265 (391)
T ss_dssp SSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHHBTTCCTT--STT----CCSSCCCBCBCCHHHHHHHHHHHH
T ss_pred ccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHHHHHHHHhcCCCCC--Ccc----cccccccccCCCHHHHHHHHHHHH
Confidence 123677777799999763 356666655433221110000000000 000 001112233445566666666778
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCcEEeCC--C-----ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec--
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRDPRFEISND--V-----RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA-- 728 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~--~-----~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s-- 728 (891)
++.+.+++..++++++.+.|++. ++++... + ...++.+++.+.. +....++.+.|.++|+....+.
T Consensus 266 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l~~~L~~~GI~v~~~~~p 340 (391)
T 3dr4_A 266 RVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL----STTRDQVIKDLDALGIESRPVFHP 340 (391)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC----SSCHHHHHHHHHHTTCCCEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc----chhHHHHHHHHHHCCCceeecCCc
Confidence 88999999999999999999998 8877654 2 1234566665310 1235688999999998754332
Q ss_pred -cc-----------------cCCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 729 -SQ-----------------EQNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 729 -~~-----------------~g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
.+ .....+ ++++..+|++|||+++++|+++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 341 MHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp GGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred cccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 00 013456 8889999999999999999864
No 108
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.20 E-value=1.2e-09 Score=121.29 Aligned_cols=275 Identities=10% Similarity=0.070 Sum_probs=171.3
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+.+.+++.+.. +. .|+ +++ |++++..++.+.+. .+.-.|+++..+|.+...++...|
T Consensus 43 l~~~la~~~~~-~~-~i~--~~s-Gt~al~~~l~~l~~------------------~~gd~Vi~~~~~~~~~~~~~~~~g 99 (388)
T 1b9h_A 43 FEREFAAHHGA-AH-ALA--VTN-GTHALELALQVMGV------------------GPGTEVIVPAFTFISSSQAAQRLG 99 (388)
T ss_dssp HHHHHHHHTTC-SE-EEE--ESC-HHHHHHHHHHHTTC------------------CTTCEEEEESSSCTHHHHHHHHTT
T ss_pred HHHHHHHHhCC-Ce-EEE--eCC-HHHHHHHHHHHcCC------------------CCcCEEEECCCccHHHHHHHHHcC
Confidence 33455555543 22 344 344 48999988876520 012358889999999999998889
Q ss_pred ceEEEecCCCC-CCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hc-----C----------
Q psy852 528 VRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQ-----G---------- 578 (891)
Q Consensus 528 v~v~~Vp~d~~-G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ld-----G---------- 578 (891)
.+++.+|+|++ +.+|+++|+++|+++++ .+++++..|+.. |.++ +| |
T Consensus 100 ~~~~~v~~~~~~~~~d~~~l~~~i~~~~~----~v~~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~ 175 (388)
T 1b9h_A 100 AVTVPVDVDAATYNLDPEAVAAAVTPRTK----VIMPVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGE 175 (388)
T ss_dssp CEEEEECBCTTTCCBCHHHHHHHCCTTEE----EECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGG
T ss_pred CEEEEEecCCCcCCCCHHHHHHhcCcCce----EEEEeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccc
Confidence 99999999874 89999999999975321 122445556654 3331 11 1
Q ss_pred CCCccEEEEcCcccCCcccccEEEEEeCCcc--chhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH
Q psy852 579 IEYADSFNVNVNKWLLTAFDSSCLWVADRYK--LTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL 656 (891)
Q Consensus 579 i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~--L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~ 656 (891)
...++..+++.||++.++ ..|+++.+++.. +............. ....+.......+-+...+..+..+. +.
T Consensus 176 ~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~a~~~~--~~ 249 (388)
T 1b9h_A 176 LDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRHSCGRPR---DDRRYFHKIAGSNMRLNEFSASVLRA--QL 249 (388)
T ss_dssp SSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHTBTTCCT---TCSSCCCCSCCCBCBCBHHHHHHHHH--HH
T ss_pred ccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHHhCCCCc---cCccceeecccccCCcCHHHHHHHHH--HH
Confidence 124788999999999876 468777776533 33221111000000 00000000001111223344444332 45
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCC-----C-ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc-
Q psy852 657 SGLQKYIRRHCELAKLFEGKVRRDPRFEISND-----V-RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS- 729 (891)
Q Consensus 657 ~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~-----~-~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~- 729 (891)
+.+.+.+++..++++++.+.|++++++++..+ + ..++++|++++.. .....++.+.|.+.|+....+..
T Consensus 250 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~gI~v~~~~~~ 325 (388)
T 1b9h_A 250 ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT----EERRNALVDRLVEAGLPAFAAFRA 325 (388)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC----HHHHHHHHHHHHHTTCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC----cccHHHHHHHHHHCCCCcccccCc
Confidence 56778888888999999999999889988753 2 2478899986421 12356788999999987544321
Q ss_pred -cc---------------------------CCeEE-EEecCCC-CHHHHHHHHHHHHHHH
Q psy852 730 -QE---------------------------QNDEV-FELQERK-RKDDLAYKRSFFVRML 759 (891)
Q Consensus 730 -~~---------------------------g~~~l-~sv~~~t-T~edId~li~~L~ei~ 759 (891)
.. ....+ +++++.+ |++|||+++++|+++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~ 385 (388)
T 1b9h_A 326 IYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAV 385 (388)
T ss_dssp GGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHH
T ss_pred cccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHH
Confidence 00 01256 8899888 9999999999999876
No 109
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.20 E-value=4.1e-11 Score=137.32 Aligned_cols=84 Identities=14% Similarity=0.087 Sum_probs=66.6
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEec--CCC----CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEP--DDK----NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEI 217 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~--d~~----g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I 217 (891)
.|+++..+|.|+..++.+.|.+++++++ |++ +.+|+++| +... +.+|+++. .|.+|.+.|+++|
T Consensus 98 ~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I 167 (446)
T 2x3l_A 98 DILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEV 167 (446)
T ss_dssp CEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHH
T ss_pred EEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHH
Confidence 4888899999999999877888999988 766 78999988 2222 34667777 5569999999999
Q ss_pred HHHHHHcCCceeeeccccCC
Q psy852 218 GPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 218 ~~i~~~~~~~lHvDaA~GG~ 237 (891)
+++|+++|+++|+|.|||++
T Consensus 168 ~~l~~~~~~~livDea~~~~ 187 (446)
T 2x3l_A 168 IKSLHQLNIPVLIDEAHGAH 187 (446)
T ss_dssp HHHHHHTTCCEEEECTTCTT
T ss_pred HHHHHhcCCeEEEcchhhhh
Confidence 99999999999999999773
No 110
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.19 E-value=2.6e-09 Score=119.41 Aligned_cols=273 Identities=12% Similarity=0.083 Sum_probs=168.0
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH--
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM-- 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~-- 524 (891)
++.+.+++.+...+. +++ +++|+++++..++.+++.... ... .++-+|+++...|.+...++.
T Consensus 75 ~l~~~la~~~g~~~~-~v~--~~~g~t~al~~al~~~~~~~~-~~~-----------~gd~vii~~~~~~~~~~~~~~~~ 139 (416)
T 1qz9_A 75 RLGNRLATLIGARDG-EVV--VTDTTSINLFKVLSAALRVQA-TRS-----------PERRVIVTETSNFPTDLYIAEGL 139 (416)
T ss_dssp HHHHHHHTTTTCCTT-SEE--ECSCHHHHHHHHHHHHHHHHH-HHS-----------TTCCEEEEETTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcc-cEE--EeCChhHHHHHHHHhhccccc-ccC-----------CCCcEEEEcCCCCCchHHHHHHH
Confidence 344566666654333 455 567888888777777653111 000 122367888889998776543
Q ss_pred --Hc--CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------hhhh-----hcCCC----
Q psy852 525 --MA--FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------CYRK-----SQGIE---- 580 (891)
Q Consensus 525 --l~--gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c~~~-----ldGi~---- 580 (891)
.. |.+++.+|. +++|+++|++++ ..++++.. .|... |+++ +|++.
T Consensus 140 ~~~~~~g~~~~~v~~-------~~~l~~~i~~~~----~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~ 208 (416)
T 1qz9_A 140 ADMLQQGYTLRLVDS-------PEELPQAIDQDT----AVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGA 208 (416)
T ss_dssp HHHHCSSCEEEEESS-------GGGHHHHCSTTE----EEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred HHHhcCCceEEEeCc-------HHHHHHHhCCCc----eEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccC
Confidence 23 788888887 778888886421 12222222 24443 4432 23221
Q ss_pred --------CccEEEEcCcccCCccccc-EEEEEeCCccchhhhcc-CCCccccCCC----CCcccc--CCccc-cccc-c
Q psy852 581 --------YADSFNVNVNKWLLTAFDS-SCLWVADRYKLTSALVV-DPLYLQHGHE----GAIDYR--HWGIP-LSRR-F 642 (891)
Q Consensus 581 --------~aDSIs~d~HK~L~~P~g~-G~llvR~~~~L~~~l~~-~~~Yl~~~~e----~~~~~~--~~ti~-~SRr-~ 642 (891)
.+|.+++++||+++++.++ |+++++++. + +.+.. ...|...... ..+.+. ..... ++-. .
T Consensus 209 ~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~-~-~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (416)
T 1qz9_A 209 VPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQL-C-DLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPIT 286 (416)
T ss_dssp SCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTT-T-TTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHH
T ss_pred cCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHHH-H-hccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHH
Confidence 3799999999999878888 999998662 1 11111 1111111000 000000 00111 1111 1
Q ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC-C--CcEEeCCC----ceeEEEEEecCCcchhhhhhHHHHHH
Q psy852 643 RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD-P--RFEISNDV----RLGLVCFRLRSENNLIADQNNRKLLE 715 (891)
Q Consensus 643 ~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~-~--~~eil~~~----~~~iV~Fr~~~~~~~~~d~ln~~L~~ 715 (891)
..+.++.+++.+..+++++..++..++++++.+.|++. + +++++.+. ..++++|++.+ ...+.+
T Consensus 287 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~ 357 (416)
T 1qz9_A 287 SLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE---------GYAVIQ 357 (416)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT---------HHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC---------HHHHHH
Confidence 12355667776666789999999999999999999885 6 88887653 36788888741 467888
Q ss_pred HHHhCCcEEEeeccccCCeEE-EEec-CCCCHHHHHHHHHHHHHHHH
Q psy852 716 DINASGRLHMVPASQEQNDEV-FELQ-ERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 716 ~L~~~G~~~~s~s~~~g~~~l-~sv~-~~tT~edId~li~~L~ei~~ 760 (891)
.|.++|+.. ...+...+ ++++ ..+|++||+++++.|+++..
T Consensus 358 ~l~~~gi~~----~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~ 400 (416)
T 1qz9_A 358 ALIDRGVIG----DYREPRIMRFGFTPLYTTFTEVWDAVQILGEILD 400 (416)
T ss_dssp HHHTTTEEC----EEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCcEe----ccCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHh
Confidence 898889763 22345567 9987 48999999999999998763
No 111
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.19 E-value=1.9e-10 Score=128.03 Aligned_cols=83 Identities=12% Similarity=0.063 Sum_probs=71.2
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecC-CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++..+|++...++...|.+++.+++| +++.+|+++|++.+++. +.+|+ .++.+|.+.|+++|+++|+
T Consensus 98 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~---~~n~tG~~~~~~~i~~l~~ 168 (391)
T 3dr4_A 98 EVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPR------TKAIM---PVHLYGQICDMDPILEVAR 168 (391)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCCC------ceEEE---EECCCCChhhHHHHHHHHH
Confidence 48888999999999988888899999998 67899999999988653 23444 3579999999999999999
Q ss_pred HcCCceeeecccc
Q psy852 223 EFDVWLHVDGAYA 235 (891)
Q Consensus 223 ~~~~~lHvDaA~G 235 (891)
++|+++++|+||+
T Consensus 169 ~~~~~li~D~a~~ 181 (391)
T 3dr4_A 169 RHNLLVIEDAAEA 181 (391)
T ss_dssp HTTCEEEEECTTC
T ss_pred HcCCEEEEECccc
Confidence 9999999999984
No 112
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.18 E-value=2.7e-10 Score=128.20 Aligned_cols=81 Identities=12% Similarity=0.070 Sum_probs=69.0
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.+....+ ...+.+++.++++ |+++|+++++++ +.+|++...+|.+|.+.|+++|++
T Consensus 107 ~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~ 175 (392)
T 3qhx_A 107 HVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALA-----DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQ 175 (392)
T ss_dssp EEEEETTCCHHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHH
Confidence 4888899999887776 2356789999876 899999988754 457888889999999999999999
Q ss_pred HHHHcCCceeeecccc
Q psy852 220 VAKEFDVWLHVDGAYA 235 (891)
Q Consensus 220 i~~~~~~~lHvDaA~G 235 (891)
+|+++|+++|+|.+|+
T Consensus 176 la~~~g~~li~D~~~~ 191 (392)
T 3qhx_A 176 LGADSSAKVLVDNTFA 191 (392)
T ss_dssp HHHHHTCEEEEECTTT
T ss_pred HHHHcCCEEEEECCCc
Confidence 9999999999999984
No 113
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.18 E-value=1.1e-10 Score=141.54 Aligned_cols=211 Identities=15% Similarity=0.054 Sum_probs=135.9
Q ss_pred EEEecCCCChHHHHH-HHHcCCeEEEEecCCC-----CcccHHHH-----HHHHHhh-hh--cCCcc-eEEEeecccCcc
Q psy852 144 MAYCSKEAHSCVEKA-AMMAFVRLKILEPDDK-----NSLRGATL-----RQVMQQD-ET--MGYIP-FFVSTTLGTTSC 208 (891)
Q Consensus 144 ~v~~S~~~H~Sv~ka-a~~~~~~v~~V~~d~~-----g~id~~~L-----~~~l~~~-~~--~g~~p-~~V~~t~Gtt~~ 208 (891)
.|+++..+|.|+..+ +.+.|.++++++.+.+ |.+|+++| +++|++. .+ ....| .+|+++..| .+
T Consensus 215 ~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn-~~ 293 (730)
T 1c4k_A 215 LVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT-YD 293 (730)
T ss_dssp EEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC-TT
T ss_pred EEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC-CC
Confidence 488899999999998 6777888888887532 56899999 7777543 10 01123 466677664 79
Q ss_pred ccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhh
Q psy852 209 CSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISK 288 (891)
Q Consensus 209 GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 288 (891)
|.+.|+++|+++|+++|+++|+|+|||+.+.+.+.+++ .++
T Consensus 294 G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g------------~~~--------------------------- 334 (730)
T 1c4k_A 294 GTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRN------------SSP--------------------------- 334 (730)
T ss_dssp SEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGG------------GCT---------------------------
T ss_pred CeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCC------------cCc---------------------------
Confidence 99999999999999999999999999654332111000 000
Q ss_pred hcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCccc----EE
Q psy852 289 LKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYAD----SF 364 (891)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~d----s~ 364 (891)
+. .+ -..+| .+
T Consensus 335 ----------------------------------------------------------l~------~~-~~g~D~~~~iv 349 (730)
T 1c4k_A 335 ----------------------------------------------------------LL------ID-DLGPEDPGIIV 349 (730)
T ss_dssp ----------------------------------------------------------TS------CC-CCCTTSCEEEE
T ss_pred ----------------------------------------------------------cc------cc-ccCCCCCCEEE
Confidence 00 00 00235 89
Q ss_pred EEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCcccc-cccccCCCCChh-HHHHHHHHHHhcHHHHHHHH
Q psy852 365 NVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDY-RHWGIPLSRRFR-SLKLWFVIRTYGLSGLQKYI 442 (891)
Q Consensus 365 ~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~~-~~~~~~~sr~~~-~l~~w~~l~~~g~~G~~~ii 442 (891)
+.++||++.+|-.+|+++++++.. .....++... .++. ......+|-... ..++-.+++.+..++..+++
T Consensus 350 ~~S~hK~L~g~~~gg~I~v~~~~l-----~g~~~~i~~~---~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~ 421 (730)
T 1c4k_A 350 VQSVHKQQAGFSQTSQIHKKDSHI-----KGQLRYCDHK---HFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLW 421 (730)
T ss_dssp EECHHHHSSCCTTCEEEEEECGGG-----TTSTTCCCHH---HHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred EECCCCCCCCCCCEEEEEecchhh-----cCcccccCHH---HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHH
Confidence 999999999998889999988641 1111222100 0000 000011222222 22344556666665557778
Q ss_pred HHHHHHHHHHHHhhcc-CCccccccC
Q psy852 443 RRHCELAKLFEGKVRR-DPRFEISND 467 (891)
Q Consensus 443 ~~~lelAr~l~~~L~~-~~~~eVv~~ 467 (891)
++.+++++++++.|.+ +++++++++
T Consensus 422 ~~~~~~a~~lr~~L~~~i~g~~v~~p 447 (730)
T 1c4k_A 422 HDLLITTIEARKKLIKAGSMFRPFVP 447 (730)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred HHHHHHHHHHHHHHhhhCCCeEEccc
Confidence 9999999999999988 799999865
No 114
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.18 E-value=6.8e-10 Score=120.98 Aligned_cols=259 Identities=10% Similarity=0.088 Sum_probs=164.6
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHH--HH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA--AM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Ka--a~ 524 (891)
++++++.+.+...+. +++ +++|+++++..++.+++. +.-.|+++..+|++...+ +.
T Consensus 53 ~~~~~l~~~~g~~~~-~v~--~~~g~t~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~ 110 (359)
T 1svv_A 53 KAARLIGELLERPDA-DVH--FISGGTQTNLIACSLALR-------------------PWEAVIATQLGHISTHETGAIE 110 (359)
T ss_dssp HHHHHHHHHHTCTTS-EEE--EESCHHHHHHHHHHHHCC-------------------TTEEEEEETTSHHHHSSTTHHH
T ss_pred HHHHHHHHHhCCCCc-cEE--EeCCchHHHHHHHHHHhC-------------------CCCEEEEcccchHHHHHHHHHh
Confidence 344455555543232 455 688999999999877632 123588899999999884 66
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhh-hcCCcc--EEEEec--CCccc-----------hhhh-----hcCC----
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDE-TMGYIP--FFVSTT--LGTTS-----------CYRK-----SQGI---- 579 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~-~~g~ip--~~Vvat--aGTT~-----------c~~~-----ldGi---- 579 (891)
..|.+++.+|.+ ++.+|+++|+++|++.. +.+..+ ++++.. .|... |.++ +|++
T Consensus 111 ~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 189 (359)
T 1svv_A 111 ATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLAS 189 (359)
T ss_dssp HTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHH
T ss_pred cCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhh
Confidence 778899999986 79999999999998741 112122 222222 24432 3321 1211
Q ss_pred ---------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccc
Q psy852 580 ---------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRS 644 (891)
Q Consensus 580 ---------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~a 644 (891)
..+|++++++||++ .|.++|+++++++ .+. .+.. +.... ......+. ..
T Consensus 190 ~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~~g~l~~~~~-~~~-~~~~---~~~~~--------~~~~~~~~--~~ 253 (359)
T 1svv_A 190 ALSSPVNDLTLADIARLTDMFYIGATKAG-GMFGEALIILNDA-LKP-NARH---LIKQR--------GALMAKGW--LL 253 (359)
T ss_dssp HHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSCEEEEECSGG-GCT-THHH---HHHHT--------TCCCTTTH--HH
T ss_pred hhcCCCcchhhhhhhhcCCEEEEecccCC-CCCceEEEEEccc-HHH-HHHH---HHhcC--------Ccccccch--hh
Confidence 24689999999984 5899999988644 221 1110 00000 00000000 11
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhC-CcE
Q psy852 645 LKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINAS-GRL 723 (891)
Q Consensus 645 L~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~ 723 (891)
...+ ...+...++.+..++..++++++.+.| +.+++++..+...+.+++++. .++.+.|.++ |+.
T Consensus 254 ~~~~--~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~~gi~ 319 (359)
T 1svv_A 254 GIQF--EVLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE-----------NTMIAELNNDFDMY 319 (359)
T ss_dssp HHHH--HHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE-----------HHHHHHHTTTEECE
T ss_pred HHHH--HHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC-----------HHHHHHHHHhcCEE
Confidence 1111 123444567888889999999999999 567888876666777766653 3678888888 987
Q ss_pred EEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 724 HMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 724 ~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+... ...+...+ ++++..++++||+++++.|++++
T Consensus 320 v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 355 (359)
T 1svv_A 320 TVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLV 355 (359)
T ss_dssp EEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC-
T ss_pred EEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHH
Confidence 6321 12344567 98888899999999999998765
No 115
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.18 E-value=3.1e-10 Score=126.34 Aligned_cols=235 Identities=11% Similarity=0.076 Sum_probs=147.4
Q ss_pred cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc
Q psy852 51 ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI 130 (891)
Q Consensus 51 ~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~ 130 (891)
..+...++|..+.+++++++|.+.... ++++|+.. +...+..+..
T Consensus 63 ~~~~~~~l~~~~r~~la~~~g~~~~~i------------------------------~~~sGt~a-~~~a~~~~~~---- 107 (405)
T 2vi8_A 63 GCEYVDIVEELARERAKQLFGAEHANV------------------------------QPHSGAQA-NMAVYFTVLE---- 107 (405)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEEC------------------------------CCSSHHHH-HHHHHHHHCC----
T ss_pred cchHHHHHHHHHHHHHHHHhCCCceEE------------------------------EecCcHHH-HHHHHHHhcC----
Confidence 447778999999999999999874311 12355543 3333322211
Q ss_pred CCccccccccCCeEEEecCCCChHHHHH---HHHcC--CeEEEEecC-CCCcccHHHHHHHHHhhhhcCCcceEEEeecc
Q psy852 131 HPFVDEGVLLSKLMAYCSKEAHSCVEKA---AMMAF--VRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLG 204 (891)
Q Consensus 131 ~~~~~~g~~~~~~~v~~S~~~H~Sv~ka---a~~~~--~~v~~V~~d-~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~G 204 (891)
+...|+++..+|.+.... +...+ .+++.++++ +++.+|+++|++.+++.. +.+|+++
T Consensus 108 ----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~-- 170 (405)
T 2vi8_A 108 ----------HGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHR-----PKLIVAA-- 170 (405)
T ss_dssp ----------TTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC-----CSEEEEC--
T ss_pred ----------CCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhcC-----CeEEEEe--
Confidence 112366666778776431 11212 367778776 678999999999997631 2344443
Q ss_pred cCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHH
Q psy852 205 TTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQ 284 (891)
Q Consensus 205 tt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~ 284 (891)
.+..|...|+++|.++|+++|+++++|.|++. .....
T Consensus 171 ~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~-g~~~~------------------------------------------ 207 (405)
T 2vi8_A 171 AAAYPRIIDFAKFREIADEVGAYLMVDMAHIA-GLVAA------------------------------------------ 207 (405)
T ss_dssp CSSCCSCCCHHHHHHHHHHHTCEEEEECTTTH-HHHHT------------------------------------------
T ss_pred CCCCCccCCHHHHHHHHHHcCCEEEEEccccc-ccccc------------------------------------------
Confidence 24457888999999999999999999999841 00000
Q ss_pred HHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEE
Q psy852 285 AISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSF 364 (891)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~ 364 (891)
+. . . .++..+|.+
T Consensus 208 -----------------------------------------------~~--------------~----~--~~~~~~di~ 220 (405)
T 2vi8_A 208 -----------------------------------------------GL--------------H----P--NPVPYAHFV 220 (405)
T ss_dssp -----------------------------------------------TS--------------S----C--CSTTTCSEE
T ss_pred -----------------------------------------------Cc--------------C----C--CccccCCEE
Confidence 00 0 0 011246888
Q ss_pred EEeCCCcCCccCCceEEEEeccccchhhccc-CccccCCCCCCcccccccccCCCCC-hhHHHHHHHHHHhcHHHHHHHH
Q psy852 365 NVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRTYGLSGLQKYI 442 (891)
Q Consensus 365 ~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~sr~-~~~l~~w~~l~~~g~~G~~~ii 442 (891)
+.++||++.+|.+ |+++.++. +...+.. ...+ . .++-. ....++..+++.+..+++.++.
T Consensus 221 ~~s~sK~~~g~~g-G~~~~~~~--~~~~l~~~~~~~--------------~-~~~~~~~~~aa~~~al~~~~~~~~~~~~ 282 (405)
T 2vi8_A 221 TTTTHKTLRGPRG-GMILCQEQ--FAKQIDKAIFPG--------------I-QGGPLMHVIAAKAVAFGEALQDDFKAYA 282 (405)
T ss_dssp EEESSSTTCCCSC-EEEEECHH--HHHHHHHHHTTT--------------T-CSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred EEeccccCCCCCC-eEEEEcHH--HHHHHHhhhccc--------------c-cCCCCHHHHHHHHHHHHHHHhhhHHHHH
Confidence 9999999888888 88888632 2221211 0001 0 11112 2333455667666567899999
Q ss_pred HHHHHHHHHHHHhhccCCcccccc
Q psy852 443 RRHCELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 443 ~~~lelAr~l~~~L~~~~~~eVv~ 466 (891)
++..++++++.+.|++. +++++.
T Consensus 283 ~~~~~~~~~l~~~L~~~-g~~~~~ 305 (405)
T 2vi8_A 283 KRVVDNAKRLASALQNE-GFTLVS 305 (405)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEGG
T ss_pred HHHHHHHHHHHHHHHhC-CCeEec
Confidence 99999999999999887 777664
No 116
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.17 E-value=1.7e-10 Score=127.58 Aligned_cols=270 Identities=10% Similarity=0.055 Sum_probs=169.5
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+... +++ +++||++++..++.+++. .+.-.|+++..+|.++..++...
T Consensus 40 ~l~~~la~~~~~~---~~i--~~~sgt~al~~~l~~l~~------------------~~gd~Vi~~~~~~~~~~~~~~~~ 96 (373)
T 3frk_A 40 KFEQEFADYCNVN---YCI--GCGNGLDALHLILKGYDI------------------GFGDEVIVPSNTFIATALAVSYT 96 (373)
T ss_dssp HHHHHHHHHHTSS---EEE--EESCHHHHHHHHHHHTTC------------------CTTCEEEEETTSCTHHHHHHHHH
T ss_pred HHHHHHHHHhCCC---eEE--EeCCHHHHHHHHHHHcCC------------------CCcCEEEECCCCcHHHHHHHHHc
Confidence 3444555555542 344 578899999988876421 12235889999999999999888
Q ss_pred CceEEEecCC-CCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcCC-------------
Q psy852 527 FVRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQGI------------- 579 (891)
Q Consensus 527 gv~v~~Vp~d-~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldGi------------- 579 (891)
|.+++.+|.+ +++.+|+++|+++|++++ ..+++++..|... |.++ +|++
T Consensus 97 g~~~~~~~~~~~~~~~d~~~l~~~l~~~~----~~v~~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~ 172 (373)
T 3frk_A 97 GAKPIFVEPDIRTYNIDPSLIESAITEKT----KAIIAVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVG 172 (373)
T ss_dssp SCEEEEECEETTTTEECGGGTGGGCCTTE----EEEEEECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETT
T ss_pred CCEEEEEeccccccCcCHHHHHHhcCCCC----eEEEEECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEecc
Confidence 9999999997 678999999999987632 2334666677765 4431 2221
Q ss_pred CCccEEEEc--CcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHh
Q psy852 580 EYADSFNVN--VNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLS 657 (891)
Q Consensus 580 ~~aDSIs~d--~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~ 657 (891)
..+|.++++ +||+++.+...|+++.++.......-........ ..+.. ...+-.++...+..++.....+
T Consensus 173 ~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~----~~~~~----~~~g~~~~~~~~~aa~~~~~~~ 244 (373)
T 3frk_A 173 SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSE----KKYHH----IYKGFNSRLDELQAGFLRVKLK 244 (373)
T ss_dssp SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCS----BTTBC----CSCCCBCCCCHHHHHHHHHHHH
T ss_pred ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcc----cCCcc----ccccccCCCCHHHHHHHHHHHH
Confidence 115777777 7799976344566665554332211100000000 00000 0011122334455666666778
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc---eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec----cc
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR---LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA----SQ 730 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~---~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s----~~ 730 (891)
++.+..++..++++++.+.|++.+ +++...+. .+.+.|.+... ....+.+.|.++|+...... ..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~ 316 (373)
T 3frk_A 245 YLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRSE-------KRDELQKYLNNNGIGTLIHYPIPIHL 316 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEES-------SHHHHHHHHHHTTBCCBCSCSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEeC-------CHHHHHHHHHHCCCCcccCcCCcccc
Confidence 889999999999999999999987 77653322 22333444322 35678899999998643221 11
Q ss_pred c-------------------CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 731 E-------------------QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 731 ~-------------------g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
. ....+ +++++++|++|||+++++|++..
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~ 365 (373)
T 3frk_A 317 QQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWK 365 (373)
T ss_dssp SGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC
T ss_pred ChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 0 01467 99999999999999999998654
No 117
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.17 E-value=1.7e-09 Score=120.01 Aligned_cols=160 Identities=13% Similarity=-0.008 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCC-ccccccccCCCCCCCCc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPND-IDMNIEDYMTPANQPQS 108 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~-~~~~~~~~~t~~~~~~~ 108 (891)
.+.+...+...+-+ ....|...+...+++..+.+++.+..|++.+. +. + .+
T Consensus 41 ~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-------------~~~v--------------~~ 92 (389)
T 1gd9_A 41 PQHIKEYAKEALDK-GLTHYGPNIGLLELREAIAEKLKKQNGIEADP-------------KTEI--------------MV 92 (389)
T ss_dssp CHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-------------TTSE--------------EE
T ss_pred CHHHHHHHHHHHhC-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-------------CCeE--------------EE
Confidence 45554444333322 22233333346799999999999998974321 01 1 13
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC--CCcccHHHHHHHH
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNSLRGATLRQVM 186 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~--~g~id~~~L~~~l 186 (891)
++||+.. +...+.... .+...|+++..+|+++..++...|.+++.++.++ .+.+|+++|++.+
T Consensus 93 ~~g~~~a-~~~~~~~~~--------------~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 157 (389)
T 1gd9_A 93 LLGANQA-FLMGLSAFL--------------KDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYV 157 (389)
T ss_dssp ESSTTHH-HHHHHTTTC--------------CTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHC
T ss_pred cCChHHH-HHHHHHHhC--------------CCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhc
Confidence 4677643 222221110 1123477788899999988877778999999885 4579999999988
Q ss_pred HhhhhcCCcceEEEeecccCcccccc---CHHHHHHHHHHcCCceeeeccccCCc
Q psy852 187 QQDETMGYIPFFVSTTLGTTSCCSFD---NLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 187 ~~~~~~g~~p~~V~~t~Gtt~~GavD---pl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
++. +.+|+++..+|.+|.+- ++++|+++|+++|+++++|.+|+++.
T Consensus 158 ~~~------~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 206 (389)
T 1gd9_A 158 TDK------TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFI 206 (389)
T ss_dssp CTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred CcC------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcc
Confidence 653 34666678899999986 49999999999999999999996643
No 118
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.17 E-value=2.3e-09 Score=119.95 Aligned_cols=280 Identities=10% Similarity=0.099 Sum_probs=173.0
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+.. + +++ +++|+++++..++.+.+. .+.-.|+++..+|.+...++...
T Consensus 36 ~l~~~la~~~~~-~--~v~--~~~ggt~al~~~~~~l~~------------------~~gd~Vl~~~~~~~~~~~~~~~~ 92 (394)
T 1o69_A 36 RFEQSVKDYSKS-E--NAL--ALNSATAALHLALRVAGV------------------KQDDIVLASSFTFIASVAPICYL 92 (394)
T ss_dssp HHHHHHHHHHCC-S--EEE--EESCHHHHHHHHHHHTTC------------------CTTCEEEEESSSCGGGTHHHHHT
T ss_pred HHHHHHHHHhCC-C--cEE--EeCCHHHHHHHHHHHcCC------------------CCCCEEEECCCccHHHHHHHHHc
Confidence 344455555543 2 355 678999999988877520 01225888999999999999888
Q ss_pred CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hc----------C-----
Q psy852 527 FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQ----------G----- 578 (891)
Q Consensus 527 gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ld----------G----- 578 (891)
|.+++.+|+++++.+|+++|+++|++... ....++++...|+.. |.++ +| |
T Consensus 93 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~-~~~~v~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~ 171 (394)
T 1o69_A 93 KAKPVFIDCDETYNIDVDLLKLAIKECEK-KPKALILTHLYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGT 171 (394)
T ss_dssp TCEEEEECBCTTSSBCHHHHHHHHHHCSS-CCCEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS
T ss_pred CCEEEEEEeCCCCCcCHHHHHHHHhcccC-CceEEEEECCCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCccccc
Confidence 99999999998899999999999986310 122345555666554 4331 11 1
Q ss_pred CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhh
Q psy852 579 IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSG 658 (891)
Q Consensus 579 i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G 658 (891)
...+|.+++++||+++ |.++|++++++++.+.........+.... +.+. ..+.+.+++.-.+++++.....+-
T Consensus 172 ~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~--~~~~----~~~~g~~~~~~~~~aa~~l~~l~~ 244 (394)
T 1o69_A 172 FGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENC--LHYE----HLDYGYNYRLSNVLGAIGVAQMEV 244 (394)
T ss_dssp SSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSS--SSCC----CSSCCCBCBCCHHHHHHHHHHHTT
T ss_pred ccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccC--cccc----ccccCcccCcCHHHHHHHHHHHHH
Confidence 1347899999999775 77899999976543322211111111100 0000 011122223323333333223456
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-----ceeEEEEEecCCc---------------chhhhhhHHHHHHHHH
Q psy852 659 LQKYIRRHCELAKLFEGKVRRDPRFEISNDV-----RLGLVCFRLRSEN---------------NLIADQNNRKLLEDIN 718 (891)
Q Consensus 659 ~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-----~~~iV~Fr~~~~~---------------~~~~d~ln~~L~~~L~ 718 (891)
+++.+++..++++++.+.|++. +++..++ ...+++|++.+.. ....+.....+.+.|.
T Consensus 245 l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 322 (394)
T 1o69_A 245 LEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLK 322 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHH
Confidence 7888899999999999999886 6665442 2236788885320 0000113567889999
Q ss_pred hCCcEEEeec-------cccCC-------------eEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 719 ASGRLHMVPA-------SQEQN-------------DEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 719 ~~G~~~~s~s-------~~~g~-------------~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.|+....+. ..... ..+ +..+.++|++|||+++++|+++.
T Consensus 323 ~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~ 384 (394)
T 1o69_A 323 NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSI 384 (394)
T ss_dssp HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 9998754331 11110 234 45678899999999999999875
No 119
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.16 E-value=8.9e-10 Score=124.34 Aligned_cols=160 Identities=13% Similarity=0.062 Sum_probs=110.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
..|.++..+...+-. ....+... ..+++..+.+|+++.+|++... +.+ .+
T Consensus 75 ~~~~v~~a~~~~~~~-~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~-------------~~v--------------~~ 124 (421)
T 3l8a_A 75 PVPEIKEAIINYGRE-HIFGYNYF--NDDLYQAVIDWERKEHDYAVVK-------------EDI--------------LF 124 (421)
T ss_dssp CCHHHHHHHHHHHHH-CCSSCBCC--CHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EE
T ss_pred CCHHHHHHHHHHHhc-CCcCCCCC--CHHHHHHHHHHHHHHhCCCCCH-------------HHE--------------EE
Confidence 345565555444322 12222222 2789999999999999975331 111 14
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecC-CCC--cccHHHHHHH
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKN--SLRGATLRQV 185 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-~~g--~id~~~L~~~ 185 (891)
++||+...+..+..+ .. +...|++..-+|++...++...+.+++.+|.+ .++ .+|+++|+++
T Consensus 125 ~~g~~ea~~~a~~~~-~~--------------~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~ 189 (421)
T 3l8a_A 125 IDGVVPAISIALQAF-SE--------------KGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKD 189 (421)
T ss_dssp ESCHHHHHHHHHHHH-SC--------------TEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHH
T ss_pred cCCHHHHHHHHHHHh-cC--------------CCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHH
Confidence 567764433333222 11 11237777889999988887778899999976 444 7899999999
Q ss_pred HHhhhhcCCcceEEEeecccCccccc---cCHHHHHHHHHHcCCceeeeccccCCc
Q psy852 186 MQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 186 l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+++.. +.+|+++..+|.+|.+ +++++|+++|+++|+++++|.+|+++.
T Consensus 190 i~~~~-----~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~ 240 (421)
T 3l8a_A 190 IIDNN-----VKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLA 240 (421)
T ss_dssp HHHTT-----EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred hhccC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 97421 3467778889999999 889999999999999999999997654
No 120
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.16 E-value=7.2e-10 Score=124.83 Aligned_cols=281 Identities=8% Similarity=-0.009 Sum_probs=169.4
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+.+.+++.+.. + +.+ ++++|++++..++.+.+. .+.-.|+++..+|.+...++...|
T Consensus 47 l~~~la~~~g~-~--~~i--~~~~gt~al~~~~~~~~~------------------~~gd~Vl~~~~~~~~~~~~~~~~g 103 (418)
T 2c81_A 47 FAKAFADFNGV-P--YCV--PTTSGSTALMLALEALGI------------------GEGDEVIVPSLTWIATATAVLNVN 103 (418)
T ss_dssp HHHHHHHHHTC-S--EEE--EESCHHHHHHHHHHHTTC------------------CTTCEEEEESSSCTHHHHHHHHTT
T ss_pred HHHHHHHHhCC-C--cEE--EeCCHHHHHHHHHHHcCC------------------CCcCEEEECCCccHhHHHHHHHcC
Confidence 33445555543 2 233 456778999888876521 012358889999999999998889
Q ss_pred ceEEEecCCC-CCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hc----------C-----
Q psy852 528 VRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQ----------G----- 578 (891)
Q Consensus 528 v~v~~Vp~d~-~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ld----------G----- 578 (891)
.+++.+|+++ ++.+|+++|+++|++++ ..++++...|+.. |.++ +| +
T Consensus 104 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~----~~v~~~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~ 179 (418)
T 2c81_A 104 ALPVFVDVEADTYCIDPQLIKSAITDKT----KAIIPVHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGT 179 (418)
T ss_dssp CEEEEECBCTTTCSBCHHHHGGGCCTTE----EEECCBCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS
T ss_pred CEEEEEecCCCCCCcCHHHHHHhhCCCC----eEEEEeCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEeccc
Confidence 9999999986 78999999999987532 1233445566654 4331 11 1
Q ss_pred CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCC-----CCCcc--ccCCc-ccccccccchHHHHH
Q psy852 579 IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGH-----EGAID--YRHWG-IPLSRRFRSLKLWFV 650 (891)
Q Consensus 579 i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~-----e~~~~--~~~~t-i~~SRr~~aL~lW~~ 650 (891)
...++..++++||+++.+ ..|+++.++++.....-.....+..... ...+. .+... +....+...+..+
T Consensus 180 ~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa-- 256 (418)
T 2c81_A 180 IGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSA-- 256 (418)
T ss_dssp SSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHH--
T ss_pred ccceEEEeccCCcccCCC-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHH--
Confidence 122678888889999873 5666666544432211110000000000 00000 00001 1111122333322
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCce------eEEEEEecCCcchhhhhhHHHHHHHHHhC-CcE
Q psy852 651 IRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRL------GLVCFRLRSENNLIADQNNRKLLEDINAS-GRL 723 (891)
Q Consensus 651 L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~------~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~ 723 (891)
+.....+.+.+..++..++++++.+.|++++++++..+++. .+++|++.+.. ..+....++.+.|.++ |+.
T Consensus 257 ~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~L~~~~gI~ 334 (418)
T 2c81_A 257 ILLDQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVK--FGGLNADQFCEILREKLNMG 334 (418)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGG--TTTCCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccc--ccccCHHHHHHHHHHcCCCC
Confidence 22334567888889999999999999999989998754431 36668875200 0011346788899888 987
Q ss_pred ---EEeeccc-------c--------------------C---------CeEE-EEecCCC-CHHHHHHHHHHHHHHHH
Q psy852 724 ---HMVPASQ-------E--------------------Q---------NDEV-FELQERK-RKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 724 ---~~s~s~~-------~--------------------g---------~~~l-~sv~~~t-T~edId~li~~L~ei~~ 760 (891)
...+... . + ...+ ++++..+ |++|||+++++|+++..
T Consensus 335 ~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~ 412 (418)
T 2c81_A 335 TFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELAR 412 (418)
T ss_dssp TTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHH
Confidence 5543210 0 1 1467 9999999 99999999999998864
No 121
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.16 E-value=4.2e-10 Score=125.39 Aligned_cols=141 Identities=8% Similarity=-0.008 Sum_probs=103.8
Q ss_pred cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc
Q psy852 51 ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI 130 (891)
Q Consensus 51 ~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~ 130 (891)
..+...++...+.+++++.+|.+.... +.+ .+++||+......+..+ .
T Consensus 76 ~~~g~~~l~~~l~~~l~~~~g~~~~~~------------~~i--------------~~~~g~~~a~~~~~~~l--~---- 123 (407)
T 3nra_A 76 EYRGDLGIRDLLAPRLAAFTGAPVDAR------------DGL--------------IITPGTQGALFLAVAAT--V---- 123 (407)
T ss_dssp CTTCCHHHHHHHHHHHHHHHTSCCCTT------------TSE--------------EEESHHHHHHHHHHHTT--C----
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCC------------CcE--------------EEeCCcHHHHHHHHHHh--C----
Confidence 344557889999999999999853210 001 13567754322222111 0
Q ss_pred CCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEec------CCCCcccHHHHHHHHHhhhhcCCcceEEEeecc
Q psy852 131 HPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP------DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLG 204 (891)
Q Consensus 131 ~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~------d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~G 204 (891)
.+.-.|+++.-+|.+...++...+.+++.++. ++++.+|+++|++.+++. +.+|+++..
T Consensus 124 ---------~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p 188 (407)
T 3nra_A 124 ---------ARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNP 188 (407)
T ss_dssp ---------CTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESS
T ss_pred ---------CCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCC
Confidence 12224778888999999998888889999998 478899999999999763 346667778
Q ss_pred cCccccccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 205 TTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 205 tt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+|.+|.+-| +++|+++|+++|+++++|.||+++.
T Consensus 189 ~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~ 225 (407)
T 3nra_A 189 NNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLR 225 (407)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSB
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 999999999 9999999999999999999997644
No 122
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.15 E-value=2.9e-09 Score=119.98 Aligned_cols=286 Identities=10% Similarity=0.064 Sum_probs=164.1
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHh-hhccCccc-cccccccceEEEecccchHHHHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISK-LKKIHPFV-DEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~-~~~~~~~~-~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
++.+.+++.+...+. +++ +++|+++++..++.++...+... ......+. ...--.....|+++..+|.|+.+++.
T Consensus 65 ~l~~~la~~~g~~~~-~v~--~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~ 141 (432)
T 3a9z_A 65 TARASLAKMIGGKPQ-DII--FTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLE 141 (432)
T ss_dssp HHHHHHHHHHTCCGG-GEE--EESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcC-eEE--EeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHH
Confidence 344455555554333 566 78899999999988875322210 00000000 00000122579999999999988764
Q ss_pred H----cCceEEEecCCC-CCCcCHHHHHHHHHhhhhcCCccEEEEec-----CCccc--------hhhh-----------
Q psy852 525 M----AFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTT-----LGTTS--------CYRK----------- 575 (891)
Q Consensus 525 l----~gv~v~~Vp~d~-~G~mD~~~Le~aI~~d~~~g~ip~~Vvat-----aGTT~--------c~~~----------- 575 (891)
. .|.+++.+|.++ ++.+|+++|+++|++. +-+|+.+ .|+.. |+++
T Consensus 142 ~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~ 215 (432)
T 3a9z_A 142 HLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPR 215 (432)
T ss_dssp HHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHhcCcEEEEEecCcccCCcCHHHHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCc
Confidence 2 578999999986 8999999999998753 2223222 34433 4332
Q ss_pred ----hcCC------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccc
Q psy852 576 ----SQGI------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLS 639 (891)
Q Consensus 576 ----ldGi------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~S 639 (891)
+|++ ..+|.+++++|||++ |. +|+++++++.... ...+.|....... .+. .++
T Consensus 216 ~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~-~~~ 284 (432)
T 3a9z_A 216 VLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-PR-IGALYVRGVGKLT---PLYPMLFGGGQER-----NFR-PGT 284 (432)
T ss_dssp CEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTTC-CS-CEEEEETTBTTTB---CCCCSCCSSCGGG-----GTS-CSC
T ss_pred eEEEEEchhhhCCcccChhhcCCCEEEEehhHhcC-Cc-ceEEEEccccccC---CcCceeecCCccc-----ccc-CCC
Confidence 1221 147999999999875 76 9999998653111 1111121110000 000 011
Q ss_pred cc-ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEe--CC----Cc-eeEEEEEecCCcchhhhhhHH
Q psy852 640 RR-FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEIS--ND----VR-LGLVCFRLRSENNLIADQNNR 711 (891)
Q Consensus 640 Rr-~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil--~~----~~-~~iV~Fr~~~~~~~~~d~ln~ 711 (891)
-. .....+..+++.+ .+++++..++..+++++|.+.|++++++++. .+ .. .++++|.+.+.+ ....
T Consensus 285 ~~~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 358 (432)
T 3a9z_A 285 ENTPMIAGLGKAADLV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ-----LRGY 358 (432)
T ss_dssp CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT-----CCHH
T ss_pred cCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC-----CcHH
Confidence 11 1112233344433 3478888999999999999999886555442 33 12 348899987531 1123
Q ss_pred HHHHHHHhCCcEEEeeccc--------------cC------CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 712 KLLEDINASGRLHMVPASQ--------------EQ------NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 712 ~L~~~L~~~G~~~~s~s~~--------------~g------~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+.+.+ .|+....+..+ .+ ..++ ++++..+|++|++++++.|++++.
T Consensus 359 ~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 359 MVLAQC--QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp HHHHHC--SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHh--cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 344433 23322211111 01 2467 999999999999999999998863
No 123
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.15 E-value=2.7e-10 Score=126.09 Aligned_cols=83 Identities=8% Similarity=0.061 Sum_probs=72.0
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCC-CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~-g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++..+|.++..++...|.+++.+++|++ +.+|+++|+++++++ +.+|+ .++.+|...|+++|.++|+
T Consensus 77 ~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~---~~~~~G~~~~~~~i~~la~ 147 (367)
T 3nyt_A 77 EVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPR------TKAII---PVSLYGQCADFDAINAIAS 147 (367)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcCcC------CcEEE---eeCCccChhhHHHHHHHHH
Confidence 4888899999999999888889999999976 899999999988653 23444 6678999999999999999
Q ss_pred HcCCceeeecccc
Q psy852 223 EFDVWLHVDGAYA 235 (891)
Q Consensus 223 ~~~~~lHvDaA~G 235 (891)
++|++||+|+|++
T Consensus 148 ~~~~~li~D~a~~ 160 (367)
T 3nyt_A 148 KYGIPVIEDAAQS 160 (367)
T ss_dssp HTTCCBEEECTTT
T ss_pred HcCCEEEEECccc
Confidence 9999999999984
No 124
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.15 E-value=2.1e-10 Score=126.50 Aligned_cols=271 Identities=7% Similarity=0.035 Sum_probs=172.3
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+... +++ +++||++++..++.+++. .+.-.|+++..+|.+...++...
T Consensus 42 ~l~~~la~~~~~~---~~~--~~~~gt~a~~~~~~~~~~------------------~~gd~v~~~~~~~~~~~~~~~~~ 98 (374)
T 3uwc_A 42 KFEKRFAALHNAP---HAI--GVGTGTDALAMSFKMLNI------------------GAGDEVITCANTFIASVGAIVQA 98 (374)
T ss_dssp HHHHHHHHHTTCS---EEE--EESCHHHHHHHHHHHTTC------------------CTTCEEEEESSSCHHHHHHHHHT
T ss_pred HHHHHHHHHhCCC---cEE--EeCCHHHHHHHHHHHcCC------------------CCCCEEEECCCccHHHHHHHHHc
Confidence 3444555665542 344 577889998887766421 12235888899999999999889
Q ss_pred CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcCC-------------C
Q psy852 527 FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQGI-------------E 580 (891)
Q Consensus 527 gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldGi-------------~ 580 (891)
|.+++.+|.++++.+|+++|+++++++++ .+++++..|+.. |.++ +|.+ .
T Consensus 99 g~~~~~~~~~~~~~~d~~~l~~~~~~~~~----~v~~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~ 174 (374)
T 3uwc_A 99 GATPVLVDSENGYVIDPEKIEAAITDKTK----AIMPVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGS 174 (374)
T ss_dssp TCEEEEECBCTTSSBCGGGTGGGCCTTEE----EECCBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS
T ss_pred CCEEEEEecCCCCCcCHHHHHHhCCCCce----EEEEeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccc
Confidence 99999999998899999999998876321 222444556544 4431 2221 2
Q ss_pred CccEEEEcCc--ccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhh
Q psy852 581 YADSFNVNVN--KWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSG 658 (891)
Q Consensus 581 ~aDSIs~d~H--K~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G 658 (891)
.+|.+++++| |+++.+-..|+++.+++......-........ ..+.... .+..++...+..++.....++
T Consensus 175 ~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~aa~~~~~~~~ 246 (374)
T 3uwc_A 175 WGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLI----NRDVCVE----YGINCRMDTIQAVIANRLMNQ 246 (374)
T ss_dssp SSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEE----ETTEESS----CCCBCBCCHHHHHHHHHHGGG
T ss_pred cccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCcc----ccCcccc----ccccCCCCHHHHHHHHHHHHH
Confidence 2699999988 99976444666666655332211111110000 0000000 111223345556666667788
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCC-cEEeCCCc---eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec----cc
Q psy852 659 LQKYIRRHCELAKLFEGKVRRDPR-FEISNDVR---LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA----SQ 730 (891)
Q Consensus 659 ~~~~i~~~~~lA~~L~~~L~~~~~-~eil~~~~---~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s----~~ 730 (891)
+.+..++..++++++.+.|++.++ +++...+. .+.+.|.+... ....+.+.|.+.|+....+. ..
T Consensus 247 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~gi~v~~~~~~~~~~ 319 (374)
T 3uwc_A 247 LETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK-------YRDQLFQYLKDNGIEVKIHYPIAMHL 319 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET-------THHHHHHHHHHTTBCCBCSCSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC-------CHHHHHHHHHHCCCccccCCCCcccc
Confidence 899999999999999999999888 88754332 12233443321 35678889999998643322 00
Q ss_pred ----c---------------CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 731 ----E---------------QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 731 ----~---------------g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
. ....+ ++++.++|++|||+++++|+++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 368 (374)
T 3uwc_A 320 QPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFY 368 (374)
T ss_dssp SGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred ChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 0 11456 88899999999999999999876
No 125
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.15 E-value=4.3e-10 Score=125.28 Aligned_cols=236 Identities=11% Similarity=0.012 Sum_probs=145.9
Q ss_pred cChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcccc
Q psy852 51 ASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKI 130 (891)
Q Consensus 51 ~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~ 130 (891)
..|....+|..+.+++++++|.+.... ++++|+. .+...+..+. .
T Consensus 63 g~~~~~~~e~~ar~~la~~~g~~~~~i------------------------------~~~sGt~-a~~~~~~~~~-~--- 107 (407)
T 2dkj_A 63 GCEVIDRVESLAIERAKALFGAAWANV------------------------------QPHSGSQ-ANMAVYMALM-E--- 107 (407)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEEEC------------------------------CCSSHHH-HHHHHHHHHC-C---
T ss_pred CchHHHHHHHHHHHHHHHHhCCCcceE------------------------------EecchHH-HHHHHHHHhc-C---
Confidence 456556888888899999999864311 1235654 3333332221 1
Q ss_pred CCccccccccCCeEEEecCCCChHHH---HHHHHcCC--eEEEEecC-CCCcccHHHHHHHHHhhhhcCCcceEEEeecc
Q psy852 131 HPFVDEGVLLSKLMAYCSKEAHSCVE---KAAMMAFV--RLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLG 204 (891)
Q Consensus 131 ~~~~~~g~~~~~~~v~~S~~~H~Sv~---kaa~~~~~--~v~~V~~d-~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~G 204 (891)
+.-.|+++..+|.+.. .++...|. ..+.++++ +++.+|+++|++.+++.. +.+|+++..
T Consensus 108 ----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~p 172 (407)
T 2dkj_A 108 ----------PGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHR-----PKVIVAGAS 172 (407)
T ss_dssp ----------TTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEECCS
T ss_pred ----------CCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcC-----CeEEEEecc
Confidence 1123777777887773 33323233 44445545 378999999999997521 234554333
Q ss_pred cCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHH
Q psy852 205 TTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQ 284 (891)
Q Consensus 205 tt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~ 284 (891)
+ .|.+.|+++|.++|+++|+++++|.+|++.....
T Consensus 173 ~--~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~------------------------------------------- 207 (407)
T 2dkj_A 173 A--YPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAA------------------------------------------- 207 (407)
T ss_dssp S--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-------------------------------------------
T ss_pred c--cCCCCCHHHHHHHHHHcCCEEEEEcccccccccc-------------------------------------------
Confidence 3 3688999999999999999999999984311100
Q ss_pred HHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccCccccCccccccccCCCcccEE
Q psy852 285 AISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSF 364 (891)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~ 364 (891)
+.+ . . .+..+|.+
T Consensus 208 -----------------------------------------------~~~--------------~---~---~~~~~di~ 220 (407)
T 2dkj_A 208 -----------------------------------------------GLH--------------P---N---PLPYAHVV 220 (407)
T ss_dssp -----------------------------------------------TCS--------------C---C---CTTTCSEE
T ss_pred -----------------------------------------------Ccc--------------C---C---ccccccEE
Confidence 000 0 0 01125899
Q ss_pred EEeCCCcCCccCCceEEEEeccccchhhccc-CccccCCCCCCcccccccccCCCCCh-hHHHHHHHHHHhcHHHHHHHH
Q psy852 365 NVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRRF-RSLKLWFVIRTYGLSGLQKYI 442 (891)
Q Consensus 365 ~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~sr~~-~~l~~w~~l~~~g~~G~~~ii 442 (891)
+.++||++.+|.+ |+++.+++.... .+.. ...+ . .++... ...++..+++.+..+++.++.
T Consensus 221 ~~s~sK~l~g~~~-G~~~~~~~~~~~-~l~~~~~~~--------------~-~~~~~~~~~~a~~~al~~~~~~~~~~~~ 283 (407)
T 2dkj_A 221 TSTTHKTLRGPRG-GLILSNDPELGK-RIDKLIFPG--------------I-QGGPLEHVIAGKAVAFFEALQPEFKEYS 283 (407)
T ss_dssp EEESSGGGCCCSC-EEEEESCHHHHH-HHHHHHTTT--------------T-CSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred EEeccccCCCCCc-eEEEECCHHHHH-HHHhhhccc--------------c-cCCCcHHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999888886 888887432221 1111 0000 0 011122 223556667766567899999
Q ss_pred HHHHHHHHHHHHhhccCCcccccc
Q psy852 443 RRHCELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 443 ~~~lelAr~l~~~L~~~~~~eVv~ 466 (891)
++..++++++.+.|++. +++++.
T Consensus 284 ~~~~~~~~~l~~~L~~~-g~~~~~ 306 (407)
T 2dkj_A 284 RLVVENAKRLAEELARR-GYRIVT 306 (407)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEGG
T ss_pred HHHHHHHHHHHHHHHhC-Cceeec
Confidence 99999999999999887 777764
No 126
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.14 E-value=1.1e-09 Score=122.86 Aligned_cols=160 Identities=9% Similarity=-0.041 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSL 109 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~ 109 (891)
.+.+...+...+-+. ...|...+...+++..+.+++.+..|++.+. +.+ .++
T Consensus 56 ~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-------------~~v--------------~~t 107 (406)
T 1xi9_A 56 PEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVEREKRKNGVDITP-------------DDV--------------RVT 107 (406)
T ss_dssp CHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EEE
T ss_pred CHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH-------------HHE--------------EEc
Confidence 355555544443222 2223333445789999999999998876431 111 135
Q ss_pred cchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC--CCcccHHHHHHHHH
Q psy852 110 GGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNSLRGATLRQVMQ 187 (891)
Q Consensus 110 ~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~--~g~id~~~L~~~l~ 187 (891)
+||+......+..+ .. +...|+++..+|.++..++...|.+++.|++++ .+.+|+++|++.++
T Consensus 108 ~g~~~al~~~~~~l--~~-------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 172 (406)
T 1xi9_A 108 AAVTEALQLIFGAL--LD-------------PGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT 172 (406)
T ss_dssp SHHHHHHHHHHHHH--CC-------------TTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC
T ss_pred CChHHHHHHHHHHh--CC-------------CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC
Confidence 67654322222222 11 122478888899999998887788999999875 46799999999886
Q ss_pred hhhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 188 QDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 188 ~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+. +.+|+++..+|.+|.+-| +++|+++|+++|+++++|.+|+++.
T Consensus 173 ~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~ 220 (406)
T 1xi9_A 173 DR------TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMT 220 (406)
T ss_dssp TT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCB
T ss_pred cC------ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 53 346667778999999865 9999999999999999999996643
No 127
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.14 E-value=6.5e-10 Score=124.82 Aligned_cols=157 Identities=11% Similarity=0.048 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSL 109 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~ 109 (891)
.+.+...+ ..+......|...+...+++..+.+++.+..|++... +.+ .++
T Consensus 58 ~~~v~~a~--~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-------------~~v--------------~~~ 108 (409)
T 2gb3_A 58 PEVFFERI--YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-------------ENV--------------LVT 108 (409)
T ss_dssp CTHHHHHH--HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-------------GGE--------------EEE
T ss_pred CHHHHHHH--HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-------------HHE--------------EEe
Confidence 35555555 4443322233334446799999999999988875431 011 135
Q ss_pred cchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC--CCcccHHHHHHHHH
Q psy852 110 GGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNSLRGATLRQVMQ 187 (891)
Q Consensus 110 ~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~--~g~id~~~L~~~l~ 187 (891)
+||+......+..+ . . +...|+++..+|+++..++...|.+++.++.++ ...+ +++|+++++
T Consensus 109 ~g~t~a~~~~~~~~-~-~-------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~ 172 (409)
T 2gb3_A 109 NGGSEAILFSFAVI-A-N-------------PGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFIN 172 (409)
T ss_dssp SHHHHHHHHHHHHH-C-C-------------TTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCC
T ss_pred CCHHHHHHHHHHHh-C-C-------------CCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhC
Confidence 67764433222222 1 1 122477888899999998877778999999885 3345 888888775
Q ss_pred hhhhcCCcceEEEeecccCccccc---cCHHHHHHHHHHcCCceeeeccccCC
Q psy852 188 QDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 188 ~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+. +.+|+++..+|.+|.+ +++++|+++|+++|+++++|.+|+++
T Consensus 173 ~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~ 219 (409)
T 2gb3_A 173 ER------TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEI 219 (409)
T ss_dssp TT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC
T ss_pred cC------CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECccccc
Confidence 43 4566777889999998 45899999999999999999999653
No 128
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.13 E-value=1.8e-09 Score=121.02 Aligned_cols=81 Identities=11% Similarity=0.187 Sum_probs=69.5
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.++..++ ...+.+++.++.+ |+++|++.+++. +.+|+++..+|.+|.+.|+++|++
T Consensus 105 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~ 173 (398)
T 2rfv_A 105 HIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAG 173 (398)
T ss_dssp EEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHH
T ss_pred EEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHH
Confidence 4888889999998876 4567899999875 899999988653 457888899999999999999999
Q ss_pred HHHHcCCceeeecccc
Q psy852 220 VAKEFDVWLHVDGAYA 235 (891)
Q Consensus 220 i~~~~~~~lHvDaA~G 235 (891)
+|+++|+++|+|.+|+
T Consensus 174 l~~~~~~~li~De~~~ 189 (398)
T 2rfv_A 174 IAHQQGALLVVDNTFM 189 (398)
T ss_dssp HHHHTTCEEEEECTTT
T ss_pred HHHHcCCEEEEECCCc
Confidence 9999999999999884
No 129
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.13 E-value=1.6e-09 Score=121.22 Aligned_cols=86 Identities=17% Similarity=0.107 Sum_probs=72.2
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|.+...++...|.+++.+++++++.+|+++|++.+++.. ..+.+|+++. .+|..+|+++|.++|++
T Consensus 74 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~ 147 (394)
T 1o69_A 74 IVLASSFTFIASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKE 147 (394)
T ss_dssp EEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHH
Confidence 48888999999999888788899999999889999999999997621 0133455442 78999999999999999
Q ss_pred cCCceeeecccc
Q psy852 224 FDVWLHVDGAYA 235 (891)
Q Consensus 224 ~~~~lHvDaA~G 235 (891)
+|+++++|+|++
T Consensus 148 ~~~~li~Dea~~ 159 (394)
T 1o69_A 148 NDIVLIEDAAEA 159 (394)
T ss_dssp TTCEEEEECTTC
T ss_pred cCCEEEEECcCc
Confidence 999999999995
No 130
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.12 E-value=2.6e-09 Score=118.47 Aligned_cols=281 Identities=10% Similarity=0.004 Sum_probs=168.3
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+.. + +++ +++||++++..++.+.+- .+.-.|+++..+|.+...++...
T Consensus 43 ~l~~~la~~~~~-~--~~~--~~~~gt~al~~~~~~~~~------------------~~gd~Vl~~~~~~~~~~~~~~~~ 99 (393)
T 1mdo_A 43 ELEAAFCRLTGN-Q--YAV--AVSSATAGMHIALMALGI------------------GEGDEVITPSMTWVSTLNMIVLL 99 (393)
T ss_dssp HHHHHHHHHHCC-S--EEE--EESCHHHHHHHHHHHTTC------------------CTTCEEEEESSSCHHHHHHHHHT
T ss_pred HHHHHHHHHhCC-C--cEE--EecChHHHHHHHHHHcCC------------------CCCCEEEeCCCccHhHHHHHHHC
Confidence 344455555543 2 344 578899999988877520 01235888999999999998889
Q ss_pred CceEEEecCCCC-CCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcCC-----------CC
Q psy852 527 FVRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQGI-----------EY 581 (891)
Q Consensus 527 gv~v~~Vp~d~~-G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldGi-----------~~ 581 (891)
|.+++.+|.+++ +.+|+++|+++|++.+ ..++++...|... |.++ +|++ -.
T Consensus 100 g~~~~~v~~~~~~~~~d~~~l~~~l~~~~----~~v~~~~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~ 175 (393)
T 1mdo_A 100 GANPVMVDVDRDTLMVTPEHIEAAITPQT----KAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIG 175 (393)
T ss_dssp TCEEEEECBCTTTCCBCHHHHHHHCCTTE----EEECCBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETT
T ss_pred CCEEEEEeccCCcCCCCHHHHHHhcCCCc----eEEEEeCCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecC
Confidence 999999999875 7899999999997532 1233344455543 4331 1211 01
Q ss_pred -ccEEEEcCc--ccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCc-cccCCccc---ccccccchHHHHHHHHH
Q psy852 582 -ADSFNVNVN--KWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAI-DYRHWGIP---LSRRFRSLKLWFVIRTY 654 (891)
Q Consensus 582 -aDSIs~d~H--K~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~-~~~~~ti~---~SRr~~aL~lW~~L~~l 654 (891)
.|.+++++| |++.++ ..|+++.++++.....-..............+ ....+... .+..++.-.+..++...
T Consensus 176 ~~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~ 254 (393)
T 1mdo_A 176 ARGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALA 254 (393)
T ss_dssp SSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHH
T ss_pred CCCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHH
Confidence 799999999 999764 45666665444332211111100000000000 00001110 01111112223333333
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC------ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec
Q psy852 655 GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV------RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA 728 (891)
Q Consensus 655 G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~------~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s 728 (891)
..+++++.+++..++++++.+.|++.+ +++...+ ...+++|++.+. ..+....++.+.|.+.|+....+.
T Consensus 255 ~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~l~~~l~~~gi~v~~~~ 330 (393)
T 1mdo_A 255 QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEA---RCGITRDALMASLKTKGIGTGLHF 330 (393)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHH---HHSSCHHHHHHHHHHTTBCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEeccc---ccccCHHHHHHHHHhCCCCccccc
Confidence 456788888999999999999999887 8876433 224678887520 001135678899999998744322
Q ss_pred cc----------------c-----CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 729 SQ----------------E-----QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 729 ~~----------------~-----g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.. . ....+ ++++..+|++||++++++|+++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 383 (393)
T 1mdo_A 331 RAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIA 383 (393)
T ss_dssp CCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 11 0 12356 88998999999999999999876
No 131
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.11 E-value=1.4e-09 Score=121.74 Aligned_cols=83 Identities=10% Similarity=0.020 Sum_probs=70.3
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++..+|++...++...|.+++.+++++ ++.+|+++|++++++. +.+|+. ++.+|.+.|+++|+++|+
T Consensus 105 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~---~n~tG~~~~l~~i~~l~~ 175 (399)
T 2oga_A 105 EVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPR------TRALLP---VHLYGHPADMDALRELAD 175 (399)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTT------EEEECC---BCGGGCCCCHHHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCC------CeEEEE---eCCcCCccCHHHHHHHHH
Confidence 477788899999998887788999999987 5899999999988653 234443 678999999999999999
Q ss_pred HcCCceeeecccc
Q psy852 223 EFDVWLHVDGAYA 235 (891)
Q Consensus 223 ~~~~~lHvDaA~G 235 (891)
++|+++++|+|++
T Consensus 176 ~~~~~li~Dea~~ 188 (399)
T 2oga_A 176 RHGLHIVEDAAQA 188 (399)
T ss_dssp HHTCEECEECTTC
T ss_pred HcCCEEEEECccc
Confidence 9999999999994
No 132
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.11 E-value=8e-10 Score=121.58 Aligned_cols=267 Identities=12% Similarity=0.025 Sum_probs=160.3
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCC--CCC----ccccChhHHHHHHHHHHHHHHHcCCCCC-CCCCCCCCCCCCCCCC
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIGC--IGF----SWAASPSCTELETIVLDWLGKAIGLPEK-FLMYPPQGKNATTPND 91 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n~--~~~----~~~~~p~~~~~E~~~~~~l~~l~g~~~~-~~~~~~~~~g~~tp~~ 91 (891)
.|+.+..+.+..+.++..+...+.+. ++. ....+|...++-.++.+++++++|.+++ .. +
T Consensus 5 ~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~--------i----- 71 (362)
T 2c0r_A 5 AYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKV--------L----- 71 (362)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEE--------E-----
T ss_pred eeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEE--------E-----
Confidence 46667666777788888887765432 111 1223677777778999999999999753 10 0
Q ss_pred ccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHH--HHHHHHcCCeEEEE
Q psy852 92 IDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCV--EKAAMMAFVRLKIL 169 (891)
Q Consensus 92 ~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv--~kaa~~~~~~v~~V 169 (891)
.+++||+...+..+..+. . | .+ .|++....|++. ...+...| +++.|
T Consensus 72 ---------------~~t~g~t~a~~~~~~~l~--~----~--------gd-~vl~~~~~~~~~~~~~~~~~~g-~~~~v 120 (362)
T 2c0r_A 72 ---------------FIQGGASTQFAMIPMNFL--K----E--------GQ-TANYVMTGSWASKALKEAKLIG-DTHVA 120 (362)
T ss_dssp ---------------EESSHHHHHHHHHHHHHC--C----T--------TC-EEEEEECSHHHHHHHHHHHHHS-CEEEE
T ss_pred ---------------EECCCchHHHHHHHHhcC--C----C--------CC-eEEEEecCcHhHHHHHHHHHhC-CeEEE
Confidence 134677654443333331 1 1 11 244444556663 34445556 89999
Q ss_pred ecCC---CC-cccHHHHHHHHHhhhhcCCcceEEEeecccCccccc-cCHHHHHHHHHHcCCceeeeccccCCccccCCC
Q psy852 170 EPDD---KN-SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF-DNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEF 244 (891)
Q Consensus 170 ~~d~---~g-~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav-Dpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~ 244 (891)
+++. .+ .+|.++++ +.+ .+.+|+++..+|.+|.+ +|+++| +|+++|+|+||+
T Consensus 121 ~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~--------- 177 (362)
T 2c0r_A 121 ASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSD--------- 177 (362)
T ss_dssp EECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTT---------
T ss_pred ecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccccccc------CCCEEEEEChhh---------
Confidence 9872 23 35776654 322 25688899999999994 998887 788888888772
Q ss_pred CccCCCCcccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccc
Q psy852 245 RPFMNGKTSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQ 324 (891)
Q Consensus 245 ~~~~~g~~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (891)
T Consensus 178 -------------------------------------------------------------------------------- 177 (362)
T 2c0r_A 178 -------------------------------------------------------------------------------- 177 (362)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhccc-CccccCCC
Q psy852 325 SYRDAIFDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQHG 403 (891)
Q Consensus 325 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~-~~~y~~~~ 403 (891)
.+.. + . .+...|.+..++|||+ +|.+.|++++++.. ...+.. .+.|+...
T Consensus 178 ------------------~~~~--~-~-----~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~~--~~~l~~~~~~~~~~~ 228 (362)
T 2c0r_A 178 ------------------ILSR--P-F-----DLNQFGLVYAGAQKNL-GPSGVTVVIVREDL--VAESPKHLPTMLRYD 228 (362)
T ss_dssp ------------------TTSS--C-C-----CGGGCSEEEEETTTTT-CCSSCEEEEEEGGG--SSSCCTTSCGGGCHH
T ss_pred ------------------ccCC--c-c-----chhHCcEEEEeccccc-cCcCcEEEEEcHHH--HhhccccCchHHhHH
Confidence 1100 0 0 0112389999999988 58889999997642 111211 12221100
Q ss_pred CCCcccccccccCCCCC-hhHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhhccCCcc-ccc
Q psy852 404 HEGAIDYRHWGIPLSRR-FRSLKLWFVIRTYGLS-GLQKYIRRHCELAKLFEGKVRRDPRF-EIS 465 (891)
Q Consensus 404 ~~~~~~~~~~~~~~sr~-~~~l~~w~~l~~~g~~-G~~~ii~~~lelAr~l~~~L~~~~~~-eVv 465 (891)
. .. ......++-+ ....++..+++.+... |+.++.++..++++++.+.|.+.+++ +++
T Consensus 229 ~---~~-~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 289 (362)
T 2c0r_A 229 T---YV-KNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGC 289 (362)
T ss_dssp H---HH-HTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEES
T ss_pred H---Hh-hccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccC
Confidence 0 00 0001112222 2345667777776665 89999999999999999999887645 654
No 133
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.11 E-value=1.5e-09 Score=121.06 Aligned_cols=159 Identities=9% Similarity=-0.009 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSL 109 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~ 109 (891)
.+.+...+...+ ......|...+...+++..+.+++.+..|.+... +.+ .++
T Consensus 56 ~~~v~~a~~~~~-~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-------------~~v--------------~~~ 107 (389)
T 1o4s_A 56 PEPVVEEAVRFL-QKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-------------DQV--------------VVT 107 (389)
T ss_dssp CHHHHHHHHHHH-TTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-------------GGE--------------EEE
T ss_pred CHHHHHHHHHHH-hcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-------------HHE--------------EEe
Confidence 355544444333 3222233334456799999999999988875221 001 134
Q ss_pred cchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC--CCcccHHHHHHHHH
Q psy852 110 GGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNSLRGATLRQVMQ 187 (891)
Q Consensus 110 ~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~--~g~id~~~L~~~l~ 187 (891)
+||+.........+ .. +...|+++..+|+++..++...|.+++.++.++ ++.+|+++|+++++
T Consensus 108 ~g~t~al~~~~~~l--~~-------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 172 (389)
T 1o4s_A 108 NGAKQALFNAFMAL--LD-------------PGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV 172 (389)
T ss_dssp SHHHHHHHHHHHHH--CC-------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC
T ss_pred cCHHHHHHHHHHHh--CC-------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc
Confidence 67754332222222 11 112377778899999988887888999999885 46899999999886
Q ss_pred hhhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCC
Q psy852 188 QDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 188 ~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+. +.+|+++..+|.+|.+-| +++|+++|+++|+++++|.+|+++
T Consensus 173 ~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 219 (389)
T 1o4s_A 173 GK------TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSL 219 (389)
T ss_dssp TT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS
T ss_pred cC------ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 53 346666788899999966 999999999999999999999653
No 134
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.10 E-value=1.3e-09 Score=123.69 Aligned_cols=80 Identities=10% Similarity=0.034 Sum_probs=68.5
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEE-ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKIL-EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V-~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~ 218 (891)
.|+++..+|.+...++ ...|.+++.+ +.+ |+++|+++|++. +.+|+++..+|.+|.+.|+++|+
T Consensus 99 ~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~ 167 (421)
T 2ctz_A 99 NIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-----RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALA 167 (421)
T ss_dssp EEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-----CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHH
Confidence 4888999999988876 4467788888 765 899999988753 45778899999999999999999
Q ss_pred HHHHHcCCceeeeccc
Q psy852 219 PVAKEFDVWLHVDGAY 234 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~ 234 (891)
++|+++|+++++|+|+
T Consensus 168 ~~a~~~g~~livD~~~ 183 (421)
T 2ctz_A 168 QAAREKGVALIVDNTF 183 (421)
T ss_dssp HHHHHHTCEEEEECGG
T ss_pred HHHHHcCCEEEEECCc
Confidence 9999999999999888
No 135
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.09 E-value=5.3e-09 Score=116.52 Aligned_cols=280 Identities=13% Similarity=0.120 Sum_probs=164.8
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+.+.+++.+... +++ ++++|++++..++.+++... . .+ ..+.-.|+++..+|.+...++...|
T Consensus 39 l~~~la~~~~~~---~~i--~~~sGt~a~~~al~~~~~~~---~--------~~-~~~g~~Vi~~~~~~~~~~~~~~~~g 101 (390)
T 3b8x_A 39 YETQFAKTFGSK---YAV--MVSSGSTANLLMIAALFFTK---K--------PR-LKKGDEIIVPAVSWSTTYYPLQQYG 101 (390)
T ss_dssp HHHHHHHHHTCS---EEE--EESCHHHHHHHHHHHTTSSS---S--------CS-CCTTCEEEEESSSCHHHHHHHHHTT
T ss_pred HHHHHHHHHCCC---cEE--EECCHHHHHHHHHHHHHhhh---h--------cC-CCCcCEEEECCCCcHHHHHHHHHcC
Confidence 334555555542 334 56788999998887764210 0 01 1123468899999999999998889
Q ss_pred ceEEEecCCCC-CCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcCC--------------
Q psy852 528 VRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQGI-------------- 579 (891)
Q Consensus 528 v~v~~Vp~d~~-G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldGi-------------- 579 (891)
.+++.+|++++ +.+|+++|+++|++++ ..++++...|... |.++ +|.+
T Consensus 102 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~----~~v~~~~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~ 177 (390)
T 3b8x_A 102 LRVKFVDIDINTLNIDIESLKEAVTDST----KAILTVNLLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGT 177 (390)
T ss_dssp CEEEEECBCTTTCSBCHHHHHHHCCTTE----EEEEEECGGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTS
T ss_pred CEEEEEecCccccCcCHHHHHHHhCcCC----eEEEEECCccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCccccc
Confidence 99999999876 9999999999997532 2333344467664 4331 2221
Q ss_pred -CCccEEEEcCcccCCcccccEEEEEeCCccchh--hhccCC---C-------ccccCCCCCccccCCcccccc-cccch
Q psy852 580 -EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTS--ALVVDP---L-------YLQHGHEGAIDYRHWGIPLSR-RFRSL 645 (891)
Q Consensus 580 -~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~--~l~~~~---~-------Yl~~~~e~~~~~~~~ti~~SR-r~~aL 645 (891)
..+.++++..+|.+.+|.| |+++.+++..... .+.... . +.............+...+.+ +...+
T Consensus 178 ~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 256 (390)
T 3b8x_A 178 FGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEM 256 (390)
T ss_dssp SSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHH
T ss_pred ccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHH
Confidence 1123555444444555665 7777766432211 111100 0 000000000000011111111 23456
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-ceeE--EEEEecCCcchhhhhhHHHHHHHHHhCCc
Q psy852 646 KLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV-RLGL--VCFRLRSENNLIADQNNRKLLEDINASGR 722 (891)
Q Consensus 646 ~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-~~~i--V~Fr~~~~~~~~~d~ln~~L~~~L~~~G~ 722 (891)
..+..+.. .+.+++..++..++++++.+.|++++++++..++ ..+. +.+++.+.. +...+.+.+.|.+.|+
T Consensus 257 ~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l~~~L~~~gI 330 (390)
T 3b8x_A 257 SGAIGIEQ--LKKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDS----GVIRKQLVENLNSAGI 330 (390)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTS----CCCHHHHHHHHHHTTB
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcC----cccHHHHHHHHHHCCC
Confidence 66666554 4677888999999999999999999899887543 3333 444554210 1135678889988998
Q ss_pred EEEe---eccccC----------------------CeEE-EEecCCCCHHHHHHHHHHH
Q psy852 723 LHMV---PASQEQ----------------------NDEV-FELQERKRKDDLAYKRSFF 755 (891)
Q Consensus 723 ~~~s---~s~~~g----------------------~~~l-~sv~~~tT~edId~li~~L 755 (891)
.... ++.+.. ...+ +++++.+|++|||+++++|
T Consensus 331 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 331 ECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp CCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred CeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 7543 221111 0257 8899999999999999876
No 136
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.09 E-value=2.7e-09 Score=118.01 Aligned_cols=158 Identities=9% Similarity=0.041 Sum_probs=109.4
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
..|.+...+...+- .....+. +...+++..+.+++++.+|.+... +.+ .+
T Consensus 46 ~~~~v~~a~~~~~~-~~~~~y~--~~~~~~~~~l~~~l~~~~g~~~~~-------------~~v--------------~~ 95 (391)
T 4dq6_A 46 AAPCIIDSLKNRLE-QEIYGYT--TRPDSYNESIVNWLYRRHNWKIKS-------------EWL--------------IY 95 (391)
T ss_dssp CCHHHHHHHHHHHT-TCCCCCB--CCCHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EE
T ss_pred CCHHHHHHHHHHHh-CCCCCCC--CCCHHHHHHHHHHHHHHhCCCCcH-------------HHe--------------EE
Confidence 34666655554443 2222222 233789999999999999964321 001 13
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecC--CC--CcccHHHHHH
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD--DK--NSLRGATLRQ 184 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d--~~--g~id~~~L~~ 184 (891)
++||+...+..+..+ . . +.-.|++...+|.+...++...+.+++.++.+ ++ +.+|+++|++
T Consensus 96 ~~g~~~a~~~~~~~~-~-~-------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~ 160 (391)
T 4dq6_A 96 SPGVIPAISLLINEL-T-K-------------ANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIEN 160 (391)
T ss_dssp ESCHHHHHHHHHHHH-S-C-------------TTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHH
T ss_pred cCChHHHHHHHHHHh-C-C-------------CCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHH
Confidence 567764333222222 1 1 11247888899999999888788899999987 33 4599999999
Q ss_pred HHHhhhhcCCcceEEEeecccCccccc---cCHHHHHHHHHHcCCceeeeccccCCc
Q psy852 185 VMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 185 ~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
++++ +.+|+++..+|.+|.+ +++++|+++|+++|+++++|.||+++.
T Consensus 161 ~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 210 (391)
T 4dq6_A 161 KIKD-------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDII 210 (391)
T ss_dssp HCTT-------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred Hhhc-------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccc
Confidence 8875 3467777789999999 889999999999999999999996543
No 137
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.08 E-value=1.1e-08 Score=115.39 Aligned_cols=83 Identities=13% Similarity=0.007 Sum_probs=70.1
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++..+|.+...++...|.+++.+++|+ ++.+|+++|++.+++. +.+|+++ +.+|.++|+++|+++|+
T Consensus 92 ~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~---~~tG~~~~l~~i~~la~ 162 (424)
T 2po3_A 92 EVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPR------TSAVVGV---HLWGRPCAADQLRKVAD 162 (424)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTT------EEEEEEE---CGGGCCCCHHHHHHHHH
T ss_pred EEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcC------CcEEEEE---CCCCCcCCHHHHHHHHH
Confidence 388888999999998887888999999986 7889999999888643 2344443 47899999999999999
Q ss_pred HcCCceeeecccc
Q psy852 223 EFDVWLHVDGAYA 235 (891)
Q Consensus 223 ~~~~~lHvDaA~G 235 (891)
++|+++++|+|++
T Consensus 163 ~~~~~li~Dea~~ 175 (424)
T 2po3_A 163 EHGLRLYFDAAHA 175 (424)
T ss_dssp HTTCEEEEECTTC
T ss_pred HcCCEEEEECccc
Confidence 9999999999995
No 138
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.08 E-value=1e-09 Score=123.28 Aligned_cols=81 Identities=12% Similarity=0.111 Sum_probs=68.2
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.++...+ ...+.+++.++.+ |+++|++.+++. +.+|+++..+|.+|.+.|+++|++
T Consensus 106 ~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~ 174 (398)
T 1gc0_A 106 EVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAK 174 (398)
T ss_dssp EEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHH
Confidence 4888889999988776 2356788888764 899999988653 468888999999999999999999
Q ss_pred HHHHcCCceeeecccc
Q psy852 220 VAKEFDVWLHVDGAYA 235 (891)
Q Consensus 220 i~~~~~~~lHvDaA~G 235 (891)
+|+++|+++|+|.+|+
T Consensus 175 l~~~~~~~li~D~~~~ 190 (398)
T 1gc0_A 175 IARKHGATVVVDNTYC 190 (398)
T ss_dssp HHGGGTCEEEEECTTT
T ss_pred HHHHcCCEEEEECCCc
Confidence 9999999999999883
No 139
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.08 E-value=1.6e-09 Score=132.06 Aligned_cols=259 Identities=11% Similarity=0.029 Sum_probs=165.2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC-----CCc-
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-----NSL- 541 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~-----G~m- 541 (891)
+++|++++|..++.+... +.-.|+++..+|.|+..++.+.|.+++.+|.+.+ |.+
T Consensus 226 ~~~Gtt~a~~~~i~al~~-------------------~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~g~i~ 286 (755)
T 2vyc_A 226 VVVGTSGSNRTIMQACMT-------------------DNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIY 286 (755)
T ss_dssp ESSHHHHHHHHHHHHHCC-------------------TTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCBCCCC
T ss_pred ECCcHHHHHHHHHHHhcC-------------------CCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCccccccccC
Confidence 466777888888776411 1235889999999999999888999999988643 456
Q ss_pred ----CHHHHHHHHHhh--h--hcCCcc--EEEEec--CCccc--------hhhh-----hc-----------------CC
Q psy852 542 ----RGATLRQVMQQD--E--TMGYIP--FFVSTT--LGTTS--------CYRK-----SQ-----------------GI 579 (891)
Q Consensus 542 ----D~~~Le~aI~~d--~--~~g~ip--~~Vvat--aGTT~--------c~~~-----ld-----------------Gi 579 (891)
|+++|+++|++. + +.+..| +++++. .|+.. |+++ +| .+
T Consensus 287 ~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~ 366 (755)
T 2vyc_A 287 PQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAM 366 (755)
T ss_dssp GGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSS
T ss_pred cCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchh
Confidence 999999999863 1 123333 233322 24332 3321 11 11
Q ss_pred CC--ccE------EEEcCcccCCcccccEEEEEeCCc-cc-hhhhccCCCccccCCCCCccccCCcccccccccchHHHH
Q psy852 580 EY--ADS------FNVNVNKWLLTAFDSSCLWVADRY-KL-TSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWF 649 (891)
Q Consensus 580 ~~--aDS------Is~d~HK~L~~P~g~G~llvR~~~-~L-~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~ 649 (891)
.. +|. ++.++||++++|.++|++++++.. .+ ...+......+.. .+.. -.....+-.
T Consensus 367 ~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s----------~sp~---~~~iaal~a 433 (755)
T 2vyc_A 367 RGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHAT----------TSPL---YAICASNDV 433 (755)
T ss_dssp CSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHTSC----------SSCC---HHHHHHHHH
T ss_pred cCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHhCC----------CCHH---HHHHHHHHH
Confidence 24 788 999999999999999999998761 11 0111100000000 0000 011123334
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCC---------cEEeCCCc------------------------------
Q psy852 650 VIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPR---------FEISNDVR------------------------------ 690 (891)
Q Consensus 650 ~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~---------~eil~~~~------------------------------ 690 (891)
+++.+..+|..+.+++..++++++.++|+++++ |+++.+..
T Consensus 434 A~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (755)
T 2vyc_A 434 AVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMH 513 (755)
T ss_dssp HHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCC
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccC
Confidence 555555565678899999999999999998877 77776431
Q ss_pred -------------------eeEEEEEecCCcc----hhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHH
Q psy852 691 -------------------LGLVCFRLRSENN----LIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKD 746 (891)
Q Consensus 691 -------------------~~iV~Fr~~~~~~----~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~e 746 (891)
...|+|..++.+. ++..-....+.+.|.+.|+. ....+.+.+ ++++..+|++
T Consensus 514 ~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~----~e~~~~~~v~~~~~~g~t~~ 589 (755)
T 2vyc_A 514 PGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIV----PTRTTDFQIMFLFSMGVTRG 589 (755)
T ss_dssp TTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCC----CSEECSSEEEEECCTTCCTT
T ss_pred cccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCE----EeecCCCeEEEEECCCCCHH
Confidence 2477887764321 01122335777888888876 233355566 9899999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy852 747 DLAYKRSFFVRMLGLV 762 (891)
Q Consensus 747 dId~li~~L~ei~~~~ 762 (891)
++++++++|+++....
T Consensus 590 ~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 590 KWGTLVNTLCSFKRHY 605 (755)
T ss_dssp TTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999987533
No 140
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.08 E-value=5.3e-09 Score=117.86 Aligned_cols=167 Identities=11% Similarity=0.035 Sum_probs=108.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
..+.+...+...+-+.....|.......+++..+.+++.+..|++... +.+ .+
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-------------~~i--------------~~ 110 (437)
T 3g0t_A 58 APQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPA-------------RAC--------------VP 110 (437)
T ss_dssp CCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EE
T ss_pred CCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCc-------------ccE--------------EE
Confidence 345555555444332111222222234689999999999988876331 111 14
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCC-cccHHHHHHHHH
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKN-SLRGATLRQVMQ 187 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g-~id~~~L~~~l~ 187 (891)
++||+...+..+..+.+...+. +..|+++.-+|.++..++...+.+++.|+++++| .+|+++|+++++
T Consensus 111 t~g~t~al~~~~~~l~~~~~gd-----------~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 111 TVGSMQGCFVSFLVANRTHKNR-----------EYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQ 179 (437)
T ss_dssp ESHHHHHHHHHHHHHTTSCTTC-----------SCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHT
T ss_pred eCCHHHHHHHHHHHHhcCCCCC-----------ccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHh
Confidence 5677643332222221001110 0037777889999999887777899999997544 799999999994
Q ss_pred hhhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 188 QDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 188 ~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
... +.+|+++..+|.+|.+-| +++|+++|+++|+++++|.+|+++.
T Consensus 180 ~~~-----~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~ 228 (437)
T 3g0t_A 180 TGQ-----FCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMD 228 (437)
T ss_dssp TTC-----CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCC
T ss_pred cCC-----ceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcc
Confidence 321 346666777999999987 7778999999999999999996543
No 141
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.08 E-value=2.5e-09 Score=118.61 Aligned_cols=137 Identities=10% Similarity=0.082 Sum_probs=99.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCC-CccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccC
Q psy852 53 PSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPN-DIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIH 131 (891)
Q Consensus 53 p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~-~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~ 131 (891)
+...++++.+.+++.+.+|.+.+. + .+ .+++||+......+..+ ..
T Consensus 67 ~g~~~l~~~la~~l~~~~g~~~~~-------------~~~v--------------~~~~g~~~a~~~~~~~~--~~---- 113 (386)
T 1u08_A 67 TGVQALREAIAQKTERLYGYQPDA-------------DSDI--------------TVTAGATEALYAAITAL--VR---- 113 (386)
T ss_dssp TCCHHHHHHHHHHHHHHHSCCCCT-------------TTTE--------------EEESSHHHHHHHHHHHH--CC----
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCC-------------CCCE--------------EEcCChHHHHHHHHHHh--CC----
Confidence 346789999999999998875321 0 01 13567754322222222 11
Q ss_pred CccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCcccc
Q psy852 132 PFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCS 210 (891)
Q Consensus 132 ~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Ga 210 (891)
+...|+++.-+|++...++...+.+++.++.+. ++.+|+++|++++.+. +.+|+++..+|.+|.
T Consensus 114 ---------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~ 178 (386)
T 1u08_A 114 ---------NGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSER------TRLVILNTPHNPSAT 178 (386)
T ss_dssp ---------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred ---------CCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhccc------CEEEEEeCCCCCCCc
Confidence 112377777889999888877788999999976 5789999999988533 346667788999999
Q ss_pred ccC---HHHHHHHHHHcCCceeeeccccCC
Q psy852 211 FDN---LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 211 vDp---l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+-| +++|+++|+++|+++++|.+|+++
T Consensus 179 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 208 (386)
T 1u08_A 179 VWQQADFAALWQAIAGHEIFVISDEVYEHI 208 (386)
T ss_dssp CCCHHHHHHHHHHHTTSCCEEEEECTTTTC
T ss_pred cCCHHHHHHHHHHHHHcCcEEEEEcccccc
Confidence 976 689999999999999999999664
No 142
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.06 E-value=2.9e-09 Score=119.52 Aligned_cols=161 Identities=11% Similarity=0.037 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSL 109 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~ 109 (891)
.|.+...+...+-+ ....|...+...+++..+.+++.+.+|++.... + .+ .++
T Consensus 40 ~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~------~------~v--------------~~t 92 (411)
T 2o0r_A 40 PPKMLQAAQDAIAG-GVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPE------T------EV--------------LVT 92 (411)
T ss_dssp CHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTT------T------SE--------------EEE
T ss_pred CHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCC------c------eE--------------EEe
Confidence 35554444433322 222333334457899999999999999753210 0 01 135
Q ss_pred cchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCC---CcccHHHHHHHH
Q psy852 110 GGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK---NSLRGATLRQVM 186 (891)
Q Consensus 110 ~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~---g~id~~~L~~~l 186 (891)
+||+.... .++.... . +...|+++..+|+++..++...|.+++.++.+++ +.+|+++|++.+
T Consensus 93 ~g~~~al~-~~~~~~~-~-------------~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l 157 (411)
T 2o0r_A 93 VGATEAIA-AAVLGLV-E-------------PGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAV 157 (411)
T ss_dssp EHHHHHHH-HHHHHHC-C-------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHC
T ss_pred CCHHHHHH-HHHHHhc-C-------------CCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhh
Confidence 67754322 2222211 1 1124777888999998888777889999998754 679999999988
Q ss_pred HhhhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 187 QQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 187 ~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
++. +.+|+++..+|.+|.+-| +++|+++|+++|+++++|.+|+++.
T Consensus 158 ~~~------~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 206 (411)
T 2o0r_A 158 TPR------TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV 206 (411)
T ss_dssp CTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred ccC------ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 643 346667788999999966 5899999999999999999996543
No 143
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.06 E-value=4.9e-09 Score=116.67 Aligned_cols=137 Identities=10% Similarity=-0.040 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCcc
Q psy852 55 CTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFV 134 (891)
Q Consensus 55 ~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~ 134 (891)
..+++..+.+++++.+|++.+. +.+ .+++||+......+..+ . .
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~-------------~~v--------------~~t~g~~~a~~~~~~~l-~-~------- 111 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQT-------------DWI--------------INTAGVVPAVFNAVREF-T-K------- 111 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EEESSHHHHHHHHHHHH-C-C-------
T ss_pred cHHHHHHHHHHHHHHhCCCCCh-------------hhE--------------EEcCCHHHHHHHHHHHh-c-C-------
Confidence 6789999999999988865321 001 13567764332222222 1 1
Q ss_pred ccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecC-CCC--cccHHHHHHHHHhhhhcCCcceEEEeecccCccccc
Q psy852 135 DEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKN--SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF 211 (891)
Q Consensus 135 ~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-~~g--~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav 211 (891)
+...|++..-+|.+...++...+.+++.+|.+ ++| .+|+++|++++++.. +.+|+++..+|.+|.+
T Consensus 112 ------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~ 180 (399)
T 1c7n_A 112 ------PGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKN-----NKALLFCSPHNPVGRV 180 (399)
T ss_dssp ------TTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTT-----EEEEEEESSBTTTTBC
T ss_pred ------CCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCC-----CcEEEEcCCCCCCCcC
Confidence 12247778889999988887778899999986 444 699999999997321 3466667889999999
Q ss_pred cC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 212 DN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 212 Dp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
-| +++|+++|+++|+++++|.+|+++.
T Consensus 181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 210 (399)
T 1c7n_A 181 WKKDELQKIKDIVLKSDLMLWSDEIHFDLI 210 (399)
T ss_dssp CCHHHHHHHHHHHHHSSCEEEEECTTTTCB
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 98 9999999999999999999996643
No 144
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.06 E-value=5.6e-09 Score=114.89 Aligned_cols=88 Identities=14% Similarity=0.107 Sum_probs=74.2
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc---cCHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGPV 220 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~i 220 (891)
.|+++..+|.+...++...+.+++.+++++++.+|+++|++.+++.. +.+|+++..+|.+|.+ +++++|+++
T Consensus 111 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~~ 185 (367)
T 3euc_A 111 KVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQ-----PAIVYLAYPNNPTGNLFDAADMEAIVRA 185 (367)
T ss_dssp EEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHh
Confidence 36777778888888887778899999999999999999999998731 3467777889999999 567788888
Q ss_pred HHHc--CCceeeeccccC
Q psy852 221 AKEF--DVWLHVDGAYAG 236 (891)
Q Consensus 221 ~~~~--~~~lHvDaA~GG 236 (891)
|+++ |+++++|.+|++
T Consensus 186 ~~~~~~~~~li~De~~~~ 203 (367)
T 3euc_A 186 AQGSVCRSLVVVDEAYQP 203 (367)
T ss_dssp TBTTSCBCEEEEECTTCC
T ss_pred hhhcCCCcEEEEeCcchh
Confidence 9999 999999999965
No 145
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.06 E-value=2.3e-09 Score=122.50 Aligned_cols=81 Identities=6% Similarity=0.015 Sum_probs=68.8
Q ss_pred EEEecCCCChHHHH----HHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEK----AAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~k----aa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++...|.+... .+...+.+++.|+.+ |+++|++++++. +.+|.+...+|.+|.+.|+++|++
T Consensus 123 ~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-----d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~ 191 (430)
T 3ri6_A 123 SVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-----DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSK 191 (430)
T ss_dssp EEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHH
Confidence 48888899998877 444567899999876 899999988754 357888889999999999999999
Q ss_pred HHHHcCCceeeecccc
Q psy852 220 VAKEFDVWLHVDGAYA 235 (891)
Q Consensus 220 i~~~~~~~lHvDaA~G 235 (891)
+|+++|+++++|.||+
T Consensus 192 la~~~g~~livD~a~~ 207 (430)
T 3ri6_A 192 VVHAKGIPLVVDTTMT 207 (430)
T ss_dssp HHHTTTCCEEEECTTS
T ss_pred HHHHcCCEEEEECCCc
Confidence 9999999999998884
No 146
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.05 E-value=8.6e-09 Score=115.05 Aligned_cols=142 Identities=13% Similarity=0.065 Sum_probs=101.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCC
Q psy852 53 PSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHP 132 (891)
Q Consensus 53 p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~ 132 (891)
+...++++.+.+++.+..|++.+. +.+ .+++||+.. +...+.....
T Consensus 75 ~~~~~l~~~la~~~~~~~g~~~~~-------------~~v--------------~~t~g~t~a-~~~~~~~~~~------ 120 (407)
T 2zc0_A 75 NGIPELREELAAFLKKYDHLEVSP-------------ENI--------------VITIGGTGA-LDLLGRVLID------ 120 (407)
T ss_dssp TCCHHHHHHHHHHHHHHSCCCCCG-------------GGE--------------EEESHHHHH-HHHHHHHHCC------
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCc-------------ceE--------------EEecCHHHH-HHHHHHHhcC------
Confidence 346789999999998888865321 001 135677643 3222222211
Q ss_pred ccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEE-EeecccCccccc
Q psy852 133 FVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFV-STTLGTTSCCSF 211 (891)
Q Consensus 133 ~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V-~~t~Gtt~~Gav 211 (891)
+.-.|++..-+|++...++...|.+++.++++++| +|+++|++.++.....+..+.+| +....+|.+|.+
T Consensus 121 --------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~ 191 (407)
T 2zc0_A 121 --------PGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVT 191 (407)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC
T ss_pred --------CCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcC
Confidence 11237777788999988887778899999998876 99999999998432122224444 577789999999
Q ss_pred cCHH---HHHHHHHHcCCceeeeccccCC
Q psy852 212 DNLA---EIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 212 Dpl~---~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
.|++ +|+++|+++|+++++|.+|+++
T Consensus 192 ~~~~~l~~i~~~~~~~~~~li~De~~~~~ 220 (407)
T 2zc0_A 192 MSMERRKALLEIASKYDLLIIEDTAYNFM 220 (407)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 9997 9999999999999999999764
No 147
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.05 E-value=6.2e-09 Score=115.97 Aligned_cols=89 Identities=13% Similarity=0.106 Sum_probs=74.2
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|.++..++...+.+++.++. +|+++|++.+++....|..+.+|+++..+|.+|.+.|+++|.++|++
T Consensus 131 ~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~ 205 (401)
T 1fc4_A 131 AIISDALNHASIIDGVRLCKAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADK 205 (401)
T ss_dssp EEEEETTCCHHHHHHHHTSCSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred EEEEcchhHHHHHHHHHHcCCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHH
Confidence 4778888999999888877888888873 58999999998643333346688889999999999999999999999
Q ss_pred cCCceeeecccc-CC
Q psy852 224 FDVWLHVDGAYA-GS 237 (891)
Q Consensus 224 ~~~~lHvDaA~G-G~ 237 (891)
+|+++++|.+|+ |+
T Consensus 206 ~~~~li~De~~~~g~ 220 (401)
T 1fc4_A 206 YDALVMVDDSHAVGF 220 (401)
T ss_dssp TTEEEEEECTTTTTT
T ss_pred cCCEEEEECcccccc
Confidence 999999999995 53
No 148
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.04 E-value=6.9e-09 Score=116.18 Aligned_cols=272 Identities=11% Similarity=0.059 Sum_probs=166.2
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+... +++ ++++|++++..++.+++. .+.-.|+++..+|.+...++...
T Consensus 67 ~l~~~la~~~~~~---~~v--~~~~Gt~a~~~~l~~~~~------------------~~gd~vl~~~~~~~~~~~~~~~~ 123 (399)
T 2oga_A 67 GFEAEFAAYCETD---HAV--GVNSGMDALQLALRGLGI------------------GPGDEVIVPSHTYIASWLAVSAT 123 (399)
T ss_dssp HHHHHHHHHTTSS---EEE--EESCHHHHHHHHHHHTTC------------------CTTCEEEEESSSCTHHHHHHHHT
T ss_pred HHHHHHHHHHCCC---eEE--EecCHHHHHHHHHHHhCC------------------CCcCEEEECCCccHHHHHHHHHC
Confidence 3444555555442 333 456779998888766520 01225788888999999998888
Q ss_pred CceEEEecCCC-CCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hc-----CC--------
Q psy852 527 FVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQ-----GI-------- 579 (891)
Q Consensus 527 gv~v~~Vp~d~-~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ld-----Gi-------- 579 (891)
|.+++.+|.++ ++.+|+++|+++|++.++ .+++++..|... |.++ +| |.
T Consensus 124 g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~----~v~~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~ 199 (399)
T 2oga_A 124 GATPVPVEPHEDHPTLDPLLVEKAITPRTR----ALLPVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIG 199 (399)
T ss_dssp TCEEEEECBCSSSSSBCHHHHHHHCCTTEE----EECCBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETT
T ss_pred CCEEEEEecCCCCCCcCHHHHHHhcCCCCe----EEEEeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecc
Confidence 99999999986 589999999999975321 222344455543 4331 11 11
Q ss_pred CCccEEEEcCc--ccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHh
Q psy852 580 EYADSFNVNVN--KWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLS 657 (891)
Q Consensus 580 ~~aDSIs~d~H--K~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~ 657 (891)
...|.+++++| |+++.|-..|++++++++.+...-..... +....+. ........+...+..|+.+.. .+
T Consensus 200 ~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~----g~~~~~~--~~~~g~~~~~~~~~~a~~~~~--l~ 271 (399)
T 2oga_A 200 AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNY----GSRQKYS--HETKGTNSRLDEMQAAVLRIR--LA 271 (399)
T ss_dssp CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBT----TCSSTTC--CCSCCCBCCCCHHHHHHHHHH--HH
T ss_pred cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhc----Ccccccc--ccccccCCCcCHHHHHHHHHH--HH
Confidence 12588889985 99986445666666655432211110000 0000000 000111123345555555443 34
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc-ee-E-EEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc-c-c-
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR-LG-L-VCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS-Q-E- 731 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~-~~-i-V~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~-~-~- 731 (891)
.+.+..++..++++++.+.|++++++++...+. .+ + +.|.+... ...++.+.|.++|+.+..... . .
T Consensus 272 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~ 344 (399)
T 2oga_A 272 HLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTE-------RRDELRSHLDARGIDTLTHYPVPVHL 344 (399)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECS-------SHHHHHHHHHHTTBCCBCSCSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECC-------CHHHHHHHHHHCCCceecCCCCcccc
Confidence 566777888899999999999988888754432 22 2 23555322 346788889899987543221 0 0
Q ss_pred -------C-------------CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 -------Q-------------NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 -------g-------------~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+ ..++ ++++..+|++||++++++|+++++
T Consensus 345 ~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~ 394 (399)
T 2oga_A 345 SPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAE 394 (399)
T ss_dssp SHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred chhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHH
Confidence 0 2457 999999999999999999998763
No 149
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.03 E-value=4.1e-09 Score=116.18 Aligned_cols=159 Identities=10% Similarity=0.037 Sum_probs=106.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
..|.+...+...+-+ ....+ ++...+++..+.+++++.+|.+.+. +.+ .+
T Consensus 38 ~~~~v~~a~~~~~~~-~~~~y--~~~~~~~~~~l~~~l~~~~g~~~~~-------------~~v--------------~~ 87 (383)
T 3kax_A 38 VPQPIQTALKKRIEH-PIFGY--TLPPENIGDIICNWTKKQYNWDIQK-------------EWI--------------VF 87 (383)
T ss_dssp CCHHHHHHHHHHHHS-CCCCC--CCCCTTHHHHHHHHHHHHHCCCCCG-------------GGE--------------EE
T ss_pred CCHHHHHHHHHHHhc-CCCCC--CCCCHHHHHHHHHHHHHHhCCCCCh-------------hhE--------------EE
Confidence 346666555554432 22222 2225688899999999999964321 001 14
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCC---CcccHHHHHHH
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK---NSLRGATLRQV 185 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~---g~id~~~L~~~ 185 (891)
++||+...+..+..+ . . +.-.|++..-+|.+...++...+.+++.++.+.+ +.+|+++|++.
T Consensus 88 ~~g~~~a~~~~~~~l-~-~-------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~ 152 (383)
T 3kax_A 88 SAGIVPALSTSIQAF-T-K-------------ENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQ 152 (383)
T ss_dssp ESCHHHHHHHHHHHH-C-C-------------TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHH
T ss_pred cCCHHHHHHHHHHHh-C-C-------------CCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHH
Confidence 567764333222222 1 1 1224788889999999888888889999998743 35999999999
Q ss_pred HHhhhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 186 MQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 186 l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+.+. +.+|+++..+|.+|.+-| +.+|+++|+++|+++++|.+|+++.
T Consensus 153 l~~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 202 (383)
T 3kax_A 153 FQQG------VKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDII 202 (383)
T ss_dssp HTTT------CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred hCcC------CeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccc
Confidence 9433 346667888999999976 5556666999999999999996544
No 150
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.03 E-value=2.9e-09 Score=122.26 Aligned_cols=82 Identities=11% Similarity=0.118 Sum_probs=68.1
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.++...+ ...|.+++.|+.+ |+++|+++|++.+ +.+|++...+|.+|.+.|+++|++
T Consensus 155 ~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~ 224 (445)
T 1qgn_A 155 HIVTTTDCYRKTRIFIETILPKMGITATVIDPA-----DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSK 224 (445)
T ss_dssp EEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-----CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHH
Confidence 3777888898887754 2357789999875 8999999998642 257888899999999999999999
Q ss_pred HHHHcCCceeeecccc
Q psy852 220 VAKEFDVWLHVDGAYA 235 (891)
Q Consensus 220 i~~~~~~~lHvDaA~G 235 (891)
+|+++|+++|+|.+|+
T Consensus 225 la~~~g~~livD~a~~ 240 (445)
T 1qgn_A 225 LCHEKGALVCIDGTFA 240 (445)
T ss_dssp HHHHTTCEEEEECTTT
T ss_pred HHHHcCCEEEEECCCc
Confidence 9999999999998883
No 151
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.03 E-value=4.2e-08 Score=108.36 Aligned_cols=89 Identities=13% Similarity=0.042 Sum_probs=76.2
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|++...+|.++..++...|.+++.++.|+++.+|+++|++++++.. +.+|+++..+|.+|.+.|++++.++|+.
T Consensus 118 ~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~~~~l~~l~~~ 192 (369)
T 3cq5_A 118 TALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQ-----PDIVFVTTPNNPTGDVTSLDDVERIINV 192 (369)
T ss_dssp EEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 37777889999998887778899999998888999999999997621 3466678899999999999999999999
Q ss_pred cCCceeeeccccCC
Q psy852 224 FDVWLHVDGAYAGS 237 (891)
Q Consensus 224 ~~~~lHvDaA~GG~ 237 (891)
+++++++|.+|+++
T Consensus 193 ~~~~li~De~~~~~ 206 (369)
T 3cq5_A 193 APGIVIVDEAYAEF 206 (369)
T ss_dssp CSSEEEEECTTGGG
T ss_pred CCCEEEEECCchhh
Confidence 99999999999543
No 152
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.03 E-value=3.6e-09 Score=116.96 Aligned_cols=266 Identities=9% Similarity=-0.012 Sum_probs=166.1
Q ss_pred HHHHHHHhhc--cCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 448 LAKLFEGKVR--RDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 448 lAr~l~~~L~--~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
+++++.+... ..+. +|+ +++|+++++..++.+... +.-.|+++..+|.+...++..
T Consensus 71 la~~l~~~~g~~~~~~-~i~--~~~g~~~a~~~~~~~l~~-------------------~gd~vl~~~~~~~~~~~~~~~ 128 (391)
T 3dzz_A 71 VADWEEIEHRARPKED-WCV--FASGVVPAISAMVRQFTS-------------------PGDQILVQEPVYNMFYSVIEG 128 (391)
T ss_dssp HHHHHHHHHSCCCCGG-GEE--EESCHHHHHHHHHHHHSC-------------------TTCEEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHH-HEE--ECCCHHHHHHHHHHHhCC-------------------CCCeEEECCCCcHHHHHHHHH
Confidence 3445544433 2222 555 788999999988776411 123588899999999999999
Q ss_pred cCceEEEecCC-CC--CCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc------
Q psy852 526 AFVRLKILEPD-DK--NSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ------ 577 (891)
Q Consensus 526 ~gv~v~~Vp~d-~~--G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld------ 577 (891)
.|.+++.+|.+ ++ +.+|+++|+++|++. +...++++. ..|+.. |.++ +|
T Consensus 129 ~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 205 (391)
T 3dzz_A 129 NGRRVISSDLIYENSKYSVNWADLEEKLATP---SVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDL 205 (391)
T ss_dssp TTCEEEECCCEEETTEEECCHHHHHHHHTST---TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTC
T ss_pred cCCEEEEeeeeecCCceeecHHHHHHHHhcc---CceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 99999999985 23 459999999999732 111223322 245552 3331 11
Q ss_pred ---C--------C--CCcc--EEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc
Q psy852 578 ---G--------I--EYAD--SFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR 641 (891)
Q Consensus 578 ---G--------i--~~aD--SIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr 641 (891)
| + +..| .+..++||+++ ....+|+++.++++.... +....... ..++ .-.
T Consensus 206 ~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~-~~~~~~~~----------~~~~---~~~ 271 (391)
T 3dzz_A 206 VLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRAR-AEESFFLA----------GIGE---PNL 271 (391)
T ss_dssp BCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHH-HHHHHHHH----------TCSS---CCT
T ss_pred cCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHH-HHHHHHhh----------ccCC---CCH
Confidence 1 1 1146 88899999996 456789998875543322 21100000 0000 001
Q ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-h
Q psy852 642 FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-A 719 (891)
Q Consensus 642 ~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~ 719 (891)
.....+..+++. +.+.+++..++..++++++.+.|++ ++++++..+.....++++++.. ......+.+.|. +
T Consensus 272 ~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~ 345 (391)
T 3dzz_A 272 LAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISAL-----GMNAEDFCKYLREK 345 (391)
T ss_dssp THHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGG-----CSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhc-----CCCHHHHHHHHHHh
Confidence 111222233332 3455788888889999999999998 8999987655445556777532 124567888885 7
Q ss_pred CCcEEEeecccc--CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 720 SGRLHMVPASQE--QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 720 ~G~~~~s~s~~~--g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.|+.+..+.... +...+ ++++ +++++|+++++.|++++.
T Consensus 346 ~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~ 387 (391)
T 3dzz_A 346 TGLIISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVL 387 (391)
T ss_dssp HCEECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred CCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 898765544332 23566 8877 689999999999998763
No 153
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.02 E-value=1.5e-08 Score=113.04 Aligned_cols=85 Identities=19% Similarity=0.237 Sum_probs=73.4
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|.++..++...+.+++.++.| |+++|++.++.... ..+.+|+++..+|.+|.+.|+++|+++|++
T Consensus 134 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 206 (401)
T 2bwn_A 134 IIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEE 206 (401)
T ss_dssp EEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHH
Confidence 47888899999999988778899999976 78999998875321 135688999999999999999999999999
Q ss_pred cCCceeeecccc
Q psy852 224 FDVWLHVDGAYA 235 (891)
Q Consensus 224 ~~~~lHvDaA~G 235 (891)
+|+++++|.|++
T Consensus 207 ~~~~li~Dea~~ 218 (401)
T 2bwn_A 207 FGALTYIDEVHA 218 (401)
T ss_dssp HTCEEEEECTTT
T ss_pred cCCEEEEecccc
Confidence 999999999995
No 154
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.02 E-value=9.2e-09 Score=115.28 Aligned_cols=84 Identities=21% Similarity=0.153 Sum_probs=72.5
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++...|.+...++...+.+++.++. +|+++|++.+++.. +.+|+++..++.+|.+.|+++|+++|++
T Consensus 145 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~ 214 (409)
T 3kki_A 145 NVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKE 214 (409)
T ss_dssp EEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHH
Confidence 4788899999999998887878877764 68999999998642 3588888899999999999999999999
Q ss_pred cCCceeeeccccCC
Q psy852 224 FDVWLHVDGAYAGS 237 (891)
Q Consensus 224 ~~~~lHvDaA~GG~ 237 (891)
+|++|++|.++++.
T Consensus 215 ~~~~li~De~~~~g 228 (409)
T 3kki_A 215 FGCALLVDESHSLG 228 (409)
T ss_dssp HTCEEEEECTTTTT
T ss_pred cCCEEEEECCcccc
Confidence 99999999999653
No 155
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.02 E-value=6.6e-09 Score=115.98 Aligned_cols=84 Identities=11% Similarity=0.130 Sum_probs=58.8
Q ss_pred EEEecCCCChHHHHHH---HH--cCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA---MM--AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa---~~--~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~ 218 (891)
.|+++..+|.+..... .. .....+.+++|++|.+|+++|++++++.. +.+|+++.+++ |...|+++|+
T Consensus 118 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~l~ 190 (420)
T 3gbx_A 118 TVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAKMR 190 (420)
T ss_dssp EEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHHHH
T ss_pred EEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHHHH
Confidence 4777777888754221 12 12456677888889999999999998742 34666655544 6789999999
Q ss_pred HHHHHcCCceeeeccc
Q psy852 219 PVAKEFDVWLHVDGAY 234 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~ 234 (891)
++|+++|+++++|.++
T Consensus 191 ~l~~~~~~~li~De~~ 206 (420)
T 3gbx_A 191 EIADSIGAYLFVDMAH 206 (420)
T ss_dssp HHHHHTTCEEEEECTT
T ss_pred HHHHHcCCEEEEECCc
Confidence 9999999999999997
No 156
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.02 E-value=1e-08 Score=114.88 Aligned_cols=87 Identities=16% Similarity=0.163 Sum_probs=72.8
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCC--CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDK--NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~--g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~ 218 (891)
.|+++.-+|.+...++...|.+++.++++++ +.+|+++|++.+++. +.+|+++..+|.+|.+.| +++|+
T Consensus 130 ~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~ 203 (416)
T 1bw0_A 130 YALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPCGSNFSRKHVEDIV 203 (416)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCCCCcccCHHHHHHHH
Confidence 3777778899998888777889999998754 679999999988643 235666667899999999 99999
Q ss_pred HHHHHcCCceeeeccccC
Q psy852 219 PVAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG 236 (891)
++|+++|++|++|.+|++
T Consensus 204 ~~~~~~~~~li~De~~~~ 221 (416)
T 1bw0_A 204 RLAEELRLPLFSDEIYAG 221 (416)
T ss_dssp HHHHHHTCCEEEECTTTT
T ss_pred HHHHHcCCEEEEEccccc
Confidence 999999999999999966
No 157
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.02 E-value=1.2e-09 Score=119.65 Aligned_cols=161 Identities=11% Similarity=0.037 Sum_probs=99.3
Q ss_pred cccCCCCCCHHHHHHHHHHHhcC---CCCCcccc---ChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccc
Q psy852 21 HAYFPSGNSYPSVLADMLSDAIG---CIGFSWAA---SPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDM 94 (891)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~~~n---~~~~~~~~---~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~ 94 (891)
+.+..+.+..+.++..+...+.+ +....+.. ++...++..++.+++++++|.+.... -
T Consensus 6 ~~~~g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~-------v--------- 69 (360)
T 1w23_A 6 NFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQ-------I--------- 69 (360)
T ss_dssp ECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEE-------E---------
T ss_pred eecCCCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCce-------E---------
Confidence 33333445567777766665532 22222222 67777888889999999999863110 0
Q ss_pred cccccCCCCCCCCcccch-hHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC
Q psy852 95 NIEDYMTPANQPQSLGGG-VIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD 173 (891)
Q Consensus 95 ~~~~~~t~~~~~~~~~gG-t~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~ 173 (891)
.+++|+ +....+....+... | .+...|+++..+|++... +...| +++.|++|+
T Consensus 70 ------------~~~~g~gt~al~~~~~~l~~~----------~--~~g~~vi~~~~~~~~~~~-~~~~g-~~~~v~~~~ 123 (360)
T 1w23_A 70 ------------LFLQGGASLQFTMLPMNLLTK----------G--TIGNYVLTGSWSEKALKE-AKLLG-ETHIAASTK 123 (360)
T ss_dssp ------------EEESSHHHHHHHHHHHHHCCT----------T--CEEEEEECSHHHHHHHHH-HHTTS-EEEEEEECG
T ss_pred ------------EEECCcchHHHHHHHHHhcCC----------C--CcccEEEecchhHHHHHH-HHHhC-CeEEeeccc
Confidence 123454 43222222222111 0 012357777788887543 44456 999999986
Q ss_pred -CCcccHHHHHH-HHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccc
Q psy852 174 -KNSLRGATLRQ-VMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 174 -~g~id~~~L~~-~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~ 234 (891)
+|.+|+++|++ ++++. +.+|+++..+|.+|.+-| +| ++++|+++++|+|+
T Consensus 124 ~~~~~d~~~l~~~~i~~~------~k~v~~~~~~nptG~~~~--~i---~~~~~~~li~D~a~ 175 (360)
T 1w23_A 124 ANSYQSIPDFSEFQLNEN------DAYLHITSNNTIYGTQYQ--NF---PEINHAPLIADMSS 175 (360)
T ss_dssp GGTSCSCCCGGGCCCCTT------EEEEEEESEETTTTEECS--SC---CCCCSSCEEEECTT
T ss_pred ccCcCCccchHhhccCCC------CCEEEEeCCCCCcceecc--cc---cccCCceEEEechh
Confidence 78899999988 76432 457888889999999855 33 33787777777777
No 158
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.01 E-value=2.7e-09 Score=116.30 Aligned_cols=243 Identities=16% Similarity=0.197 Sum_probs=143.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHH---HHHHcCceEEEecCCCCCCcCHH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK---AAMMAFVRLKILEPDDKNSLRGA 544 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~K---aa~l~gv~v~~Vp~d~~G~mD~~ 544 (891)
+++||++++..++.+.. + +.-.|+++...|.+... .+...|.+++.+ .++++.+|++
T Consensus 58 ~~~~gt~a~~~~~~~~~----~---------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~ 117 (347)
T 1jg8_A 58 FVPSGTMGNQVSIMAHT----Q---------------RGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPD 117 (347)
T ss_dssp EESCHHHHHHHHHHHHC----C---------------TTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHH
T ss_pred EecCcHHHHHHHHHHhc----C---------------CCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHH
Confidence 56788999887764421 0 12247778889987654 445678888888 6667889999
Q ss_pred HHHHHHHhhhhc--CCccEEEEe---cC-Cccc-----------hhhh-----hc-----------CC------CCccEE
Q psy852 545 TLRQVMQQDETM--GYIPFFVST---TL-GTTS-----------CYRK-----SQ-----------GI------EYADSF 585 (891)
Q Consensus 545 ~Le~aI~~d~~~--g~ip~~Vva---ta-GTT~-----------c~~~-----ld-----------Gi------~~aDSI 585 (891)
+|+++|++.... ....+++.. .. |++. |.++ +| +. ..+|++
T Consensus 118 ~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~ 197 (347)
T 1jg8_A 118 DVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSV 197 (347)
T ss_dssp HHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEE
T ss_pred HHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEE
Confidence 999999752100 111223322 23 6653 3321 22 22 247899
Q ss_pred EEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHH
Q psy852 586 NVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRR 665 (891)
Q Consensus 586 s~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~ 665 (891)
++++||+++.|. |++++.+++.+.........+ +.+. +..++..+..+..+ +.+.+.+++
T Consensus 198 ~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~~~~------------~~~~----~~~~~~~~~~~~~l--~~~~~~~~~ 257 (347)
T 1jg8_A 198 MFCLSKGLCAPV--GSVVVGDRDFIERARKARKML------------GGGM----RQAGVLAAAGIIAL--TKMVDRLKE 257 (347)
T ss_dssp EEESSSTTCCSS--CEEEEECHHHHHHHHHHHHHH------------TCCC----SSTHHHHHHHHHHH--HHSSTTHHH
T ss_pred EEecccccCCCc--eEEEEcCHHHHHHHHHHHHHc------------CCch----hHHHHHHHHHHHHH--HHHHHHHHH
Confidence 999999999884 555555553332211111000 0000 00111112221111 112223444
Q ss_pred HHHHHHHHHHHhccCCCcEEe-CCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCC
Q psy852 666 HCELAKLFEGKVRRDPRFEIS-NDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERK 743 (891)
Q Consensus 666 ~~~lA~~L~~~L~~~~~~eil-~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~t 743 (891)
..+.++++.+.|++. ++++. .++..++++|++++. +....++.+.|.+.|+.+... +...+ ++++..+
T Consensus 258 ~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~v~~~----~~~~iRl~~~~~~ 327 (347)
T 1jg8_A 258 DHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNL-----KVNAHGFIEALRNSGVLANAV----SDTEIRLVTHKDV 327 (347)
T ss_dssp HHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTS-----SSCHHHHHHHHHHHTEECEEE----ETTEEEEECCTTS
T ss_pred HHHHHHHHHHHHHhc-CceeccCCCcceEEEEEcccc-----cCCHHHHHHHHHHCCCEEecC----CCCeEEEEeCCCC
Confidence 556788888888876 66653 345667888888531 123567888888889875432 13456 9998889
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy852 744 RKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 744 T~edId~li~~L~ei~~ 760 (891)
+++|++++++.|+++..
T Consensus 328 ~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 328 SRNDIEEALNIFEKLFR 344 (347)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999998753
No 159
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.01 E-value=2.8e-09 Score=118.03 Aligned_cols=89 Identities=13% Similarity=0.101 Sum_probs=74.7
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecC---CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPD---DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEI 217 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d---~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I 217 (891)
.|+++..+|++...++...+.+++.|+.+ +++.+|+++|++++++. +.+|+++..+|.+|.+-| +++|
T Consensus 104 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i 177 (381)
T 1v2d_A 104 EVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR------TRALLLNTPMNPTGLVFGERELEAI 177 (381)
T ss_dssp EEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcC------CEEEEECCCCCCCCCccCHHHHHHH
Confidence 47777889999988887778899999987 56889999999888543 457777789999999966 8999
Q ss_pred HHHHHHcCCceeeeccccCCc
Q psy852 218 GPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 218 ~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+++|+++|+++++|.+++++.
T Consensus 178 ~~~~~~~~~~li~De~~~~~~ 198 (381)
T 1v2d_A 178 ARLARAHDLFLISDEVYDELY 198 (381)
T ss_dssp HHHHHHTTCEEEEECTTTTCB
T ss_pred HHHHHHcCCEEEEEcCccccc
Confidence 999999999999999996543
No 160
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.01 E-value=2.4e-08 Score=109.15 Aligned_cols=90 Identities=16% Similarity=0.034 Sum_probs=76.5
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|.+....+...+.+++.++.++++.+|+++|++.+++. ..+.+|+++..+|.+|.+-|++++.++++.
T Consensus 94 ~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~ 169 (354)
T 3ly1_A 94 QLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEPWIAS 169 (354)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHT
T ss_pred eEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence 3777888999999888888889999999989999999999999741 114577778899999999999999999887
Q ss_pred --cCCceeeeccccCC
Q psy852 224 --FDVWLHVDGAYAGS 237 (891)
Q Consensus 224 --~~~~lHvDaA~GG~ 237 (891)
+|+++++|.+|+++
T Consensus 170 ~~~~~~li~De~~~~~ 185 (354)
T 3ly1_A 170 KPANTMFIVDEAYAEF 185 (354)
T ss_dssp CCTTEEEEEECTTGGG
T ss_pred CCCCeEEEEeccHHHh
Confidence 89999999998653
No 161
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.01 E-value=3e-09 Score=116.99 Aligned_cols=271 Identities=11% Similarity=0.043 Sum_probs=157.5
Q ss_pred HHHHHHHHhhccCCccc-cccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH--HHHHH
Q psy852 447 ELAKLFEGKVRRDPRFE-ISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAA 523 (891)
Q Consensus 447 elAr~l~~~L~~~~~~e-Vv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S--v~Kaa 523 (891)
++.+.+++.+...++.+ ++ +|+|+++++..++.+.- +. ++ .|++....|++ ....+
T Consensus 53 ~~~~~la~~~g~~~~~~~i~--~t~g~t~a~~~~~~~l~----~~--------------gd-~vl~~~~~~~~~~~~~~~ 111 (362)
T 2c0r_A 53 EAQARLLALLGNPTGYKVLF--IQGGASTQFAMIPMNFL----KE--------------GQ-TANYVMTGSWASKALKEA 111 (362)
T ss_dssp HHHHHHHHHTTCCSSEEEEE--ESSHHHHHHHHHHHHHC----CT--------------TC-EEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEEE--ECCCchHHHHHHHHhcC----CC--------------CC-eEEEEecCcHhHHHHHHH
Confidence 34446666666533224 34 57889999988776531 00 12 24333344554 23455
Q ss_pred HHcCceEEEecCCC---CC-CcCHHHHHHHHHhhhhcCCccEEE---EecCCcc-c-------hhhhhcC----------
Q psy852 524 MMAFVRLKILEPDD---KN-SLRGATLRQVMQQDETMGYIPFFV---STTLGTT-S-------CYRKSQG---------- 578 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~---~G-~mD~~~Le~aI~~d~~~g~ip~~V---vataGTT-~-------c~~~ldG---------- 578 (891)
...| +++.+|.+. .+ .+|.++++ |++++ ..+++ .+..|+. . +.-++|+
T Consensus 112 ~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t----~~v~~~~~~n~tG~~~~~l~~i~~~~vivD~a~~~~~~~~~ 184 (362)
T 2c0r_A 112 KLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNA----AYLHLTSNETIEGAQFKAFPDTGSVPLIGDMSSDILSRPFD 184 (362)
T ss_dssp HHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTE----EEEEEESEETTTTEECSSCCCCTTSCEEEECTTTTTSSCCC
T ss_pred HHhC-CeEEEecccccccccCCCHHHcc--cCCCc----CEEEEeCCcCccceecccccccCCCEEEEEChhhccCCccc
Confidence 5567 888898762 23 35666553 43221 11222 3346664 2 1001221
Q ss_pred CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-CCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHh
Q psy852 579 IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLS 657 (891)
Q Consensus 579 i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~ 657 (891)
+...|.+++++|||++ |.|+|+++++++. + +.+.. .+.|+............++.. ......+..+++.+...
T Consensus 185 ~~~~d~~~~s~~K~~g-~~G~G~l~~~~~~-~-~~l~~~~~~~~~~~~~~~~~~~~~t~~---~~~~~a~~~al~~~~~~ 258 (362)
T 2c0r_A 185 LNQFGLVYAGAQKNLG-PSGVTVVIVREDL-V-AESPKHLPTMLRYDTYVKNNSLYNTPP---SFGIYMVNEVLKWIEER 258 (362)
T ss_dssp GGGCSEEEEETTTTTC-CSSCEEEEEEGGG-S-SSCCTTSCGGGCHHHHHHTTTCSSCCC---HHHHHHHHHHHHHHHHT
T ss_pred hhHCcEEEEecccccc-CcCcEEEEEcHHH-H-hhccccCchHHhHHHHhhccCcCCCch---HHHHHHHHHHHHHHHHh
Confidence 2334999999999996 8899999997652 1 11111 111110000000000001111 12224455666655555
Q ss_pred -hHHHHHHHHHHHHHHHHHHhccCCCc-EEeCCC---ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccC
Q psy852 658 -GLQKYIRRHCELAKLFEGKVRRDPRF-EISNDV---RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQ 732 (891)
Q Consensus 658 -G~~~~i~~~~~lA~~L~~~L~~~~~~-eil~~~---~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g 732 (891)
+++++.++..++++++.+.|++.+++ ++..++ ..++++|++++ .....++.+.|.+.|++...+...
T Consensus 259 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~~gi~~~~g~~~-- 330 (362)
T 2c0r_A 259 GGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS------EELEKEFVKASEQEGFVGLKGHRS-- 330 (362)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC------HHHHHHHHHHHHHTTEESCBCCTT--
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC------cchHHHHHHHHHHCCCeeccCCCC--
Confidence 78999999999999999999998656 876432 34678888752 224567888899999864333222
Q ss_pred CeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 733 NDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 733 ~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
...+ +|++++++++|+++++++|+++.
T Consensus 331 ~~~iRis~~~~~~~e~i~~l~~~l~~~~ 358 (362)
T 2c0r_A 331 VGGLRASIYNAVPYESCEALVQFMEHFK 358 (362)
T ss_dssp TCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 2336 99999999999999999999875
No 162
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.00 E-value=5.7e-08 Score=108.73 Aligned_cols=83 Identities=19% Similarity=0.095 Sum_probs=69.4
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecC-CCCcccHHHHHHHHH-hhhhcCCcceEEEeecccCccccccCHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKNSLRGATLRQVMQ-QDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVA 221 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-~~g~id~~~L~~~l~-~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~ 221 (891)
.|+++..+|.+...++...|.+++.+++| +++.+|+++|++++. ... .+.+|+ .++.+|.+.|+++|.++|
T Consensus 80 ~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~----~tk~v~---~~~~~G~~~~~~~i~~la 152 (377)
T 3ju7_A 80 YALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKE----EVAIVV---PYATFGSWMNLEEYEELE 152 (377)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGG----GEEEEC---CBCGGGBCCCCHHHHHHH
T ss_pred EEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCC----CceEEE---EECCCCCccCHHHHHHHH
Confidence 48889999999999888888899999998 578999999999984 330 123444 356789999999999999
Q ss_pred HHcCCceeeeccc
Q psy852 222 KEFDVWLHVDGAY 234 (891)
Q Consensus 222 ~~~~~~lHvDaA~ 234 (891)
+ +|++||+|+|+
T Consensus 153 ~-~~~~vi~D~a~ 164 (377)
T 3ju7_A 153 K-KGVPVVVDAAP 164 (377)
T ss_dssp H-TTCCBEEECTT
T ss_pred h-cCCEEEEECCC
Confidence 9 99999999998
No 163
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.00 E-value=7.2e-09 Score=117.34 Aligned_cols=89 Identities=15% Similarity=0.079 Sum_probs=74.7
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecC--CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPD--DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d--~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~ 218 (891)
.|+++.-+|......+...|.+++.++.+ .++.+|+++|++.+++. +.+|+++..+|.+|.+-| +++|+
T Consensus 144 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~ 217 (427)
T 3dyd_A 144 NILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCGSVFSKRHLQKIL 217 (427)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCCCCCCHHHHHHHH
Confidence 47777788888888887778899999886 35689999999988653 346677778999999999 99999
Q ss_pred HHHHHcCCceeeeccccCCc
Q psy852 219 PVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG~~ 238 (891)
++|+++|+++++|.||+++.
T Consensus 218 ~~~~~~~~~~i~Deay~~~~ 237 (427)
T 3dyd_A 218 AVAARQCVPILADEIYGDMV 237 (427)
T ss_dssp HHHHHTTCCEEEECTTTTCB
T ss_pred HHHHHCCCEEEEEcCchhhc
Confidence 99999999999999997654
No 164
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.00 E-value=1.3e-09 Score=121.97 Aligned_cols=261 Identities=11% Similarity=-0.030 Sum_probs=152.4
Q ss_pred CCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCC
Q psy852 28 NSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQ 107 (891)
Q Consensus 28 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~ 107 (891)
...+.++..+... .+........+|...++..++.+++++++|.+.... . .
T Consensus 50 ~~~~~v~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~-------i---------------------~ 100 (398)
T 2fyf_A 50 KVRLEQLQTLTTT-AAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYE-------V---------------------I 100 (398)
T ss_dssp CCCHHHHHGGGTT-TTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCE-------E---------------------E
T ss_pred CCCHHHHHHHhhc-CCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCce-------E---------------------E
Confidence 3445666555442 112111123467777888899999999999973210 0 1
Q ss_pred c-ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHH-HHHHc--CCeEEEEecCCCCcccHHHHH
Q psy852 108 S-LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK-AAMMA--FVRLKILEPDDKNSLRGATLR 183 (891)
Q Consensus 108 ~-~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~k-aa~~~--~~~v~~V~~d~~g~id~~~L~ 183 (891)
+ ++||+...++.+..+. . ++ +++++..+|..... .+... +.+++.|+++ +|.++..+
T Consensus 101 ~~t~g~t~al~~~~~~l~------~---------~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~g~~~~~~-- 161 (398)
T 2fyf_A 101 LGNGGATAFWDAAAFGLI------D---------KR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD-PGSAPEPQ-- 161 (398)
T ss_dssp EEETCHHHHHHHHHHHTC------S---------SC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC-TTCCCCCC--
T ss_pred EeCCchhHHHHHHHHHhc------C---------CC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC-CCCCCCcc--
Confidence 3 5677654333332220 0 12 23335566643322 33333 6688899988 55543321
Q ss_pred HHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCCcccccCCCCccc
Q psy852 184 QVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSPIW 263 (891)
Q Consensus 184 ~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~~~~d~~~~s~~~ 263 (891)
+. ..+.+|+++..+|.+|.+.|+++|.++ +|+++|+|+|++.
T Consensus 162 --i~------~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~--------------------------- 203 (398)
T 2fyf_A 162 --TD------PSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGA--------------------------- 203 (398)
T ss_dssp --CC------TTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTT---------------------------
T ss_pred --cc------CCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEecccc---------------------------
Confidence 21 225588888999999999999998886 7777777777621
Q ss_pred ccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhccccccccccccccccccccccceEEEeeccccC
Q psy852 264 YERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIFDVWLHVDGAYAG 343 (891)
Q Consensus 264 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 343 (891)
T Consensus 204 -------------------------------------------------------------------------------- 203 (398)
T 2fyf_A 204 -------------------------------------------------------------------------------- 203 (398)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcc-------cCccccCCCCC-Cccccccccc
Q psy852 344 SSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-------VDPLYLQHGHE-GAIDYRHWGI 415 (891)
Q Consensus 344 ~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~-------~~~~y~~~~~~-~~~~~~~~~~ 415 (891)
+... .. +..+|.++.++||++..|.+.|++++++.. +. .+. ..++|+..... ..+. ....
T Consensus 204 ~~~~-~~-------~~~~di~~~s~sK~~~~~gg~g~l~~~~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 271 (398)
T 2fyf_A 204 GGLP-VD-------IAETDAYYFAPQKNFASDGGLWLAIMSPAA-LS-RIEAIAATGRWVPDFLSLPIAVENSL-KNQT- 271 (398)
T ss_dssp TTSC-CC-------GGGCSEEEECTTSTTCSCSSEEEEEECHHH-HH-HHHHHHHTTCCCCGGGCHHHHHHHHT-TTCC-
T ss_pred CCcc-cC-------cccCcEEEEecCcccCCCCceEEEEECHHH-HH-HhhcccccCCCCCcEEehHHHhhhcc-cCCC-
Confidence 1100 00 112689999999998888668888887542 11 111 01233321100 0000 0011
Q ss_pred CCCCCh-hHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHhhccCCcccccc
Q psy852 416 PLSRRF-RSLKLWFVIRTYGLSG-LQKYIRRHCELAKLFEGKVRRDPRFEISN 466 (891)
Q Consensus 416 ~~sr~~-~~l~~w~~l~~~g~~G-~~~ii~~~lelAr~l~~~L~~~~~~eVv~ 466 (891)
.++-.. ...++..+++.+...| +.++.++..++++++.+.|++.++++++.
T Consensus 272 ~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 324 (398)
T 2fyf_A 272 YNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFV 324 (398)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESC
T ss_pred CCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceecc
Confidence 122222 3456777888877777 99999999999999999999888888774
No 165
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.00 E-value=1.5e-08 Score=112.44 Aligned_cols=89 Identities=9% Similarity=-0.078 Sum_probs=73.0
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCC---cccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKN---SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEI 217 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g---~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I 217 (891)
.|++..-+|++...++...+.+++.+|.+.++ .+|+++|++++++. .+.+|+++..+|.+|.+-| +++|
T Consensus 113 ~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~l 187 (390)
T 1d2f_A 113 GVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWTCDELEIM 187 (390)
T ss_dssp EEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCCCCTTHHHHH
T ss_pred EEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCcCcCHHHHHHH
Confidence 36777788999988887778899999987543 59999999998642 1346666778999999977 8999
Q ss_pred HHHHHHcCCceeeeccccCC
Q psy852 218 GPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 218 ~~i~~~~~~~lHvDaA~GG~ 237 (891)
+++|+++|+++++|.+|+++
T Consensus 188 ~~~~~~~~~~li~De~~~~~ 207 (390)
T 1d2f_A 188 ADLCERHGVRVISDEIHMDM 207 (390)
T ss_dssp HHHHHHTTCEEEEECTTTTC
T ss_pred HHHHHHcCCEEEEEcccccc
Confidence 99999999999999999654
No 166
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.99 E-value=7.5e-07 Score=101.80 Aligned_cols=93 Identities=13% Similarity=0.060 Sum_probs=74.2
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEE-EeecccCccccccC---HHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFV-STTLGTTSCCSFDN---LAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V-~~t~Gtt~~GavDp---l~~I~~ 219 (891)
.|++..-+|.+...++...+.+++.||.|++| +|+++|++.++.+...+..|.+| +....+|.+|.+-| +++|++
T Consensus 166 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~ 244 (448)
T 3aow_A 166 IVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLE 244 (448)
T ss_dssp EEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHH
Confidence 47777788999988888778899999998877 99999999997321122234454 67788899999876 568999
Q ss_pred HHHHcCCceeeeccccCC
Q psy852 220 VAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG~ 237 (891)
+|+++|++|++|.+|+++
T Consensus 245 la~~~~~~lI~De~y~~~ 262 (448)
T 3aow_A 245 LASEYDFIVVEDDPYGEL 262 (448)
T ss_dssp HHHHHTCEEEEECSCTTC
T ss_pred HHHHcCCEEEEECCCccc
Confidence 999999999999999654
No 167
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=98.99 E-value=8.1e-09 Score=117.44 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=67.6
Q ss_pred EEEecCCCChHHHHHHH----HcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAM----MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~----~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.++...+. ..+.+++.++.+ |+++|+++|++. +.+|++...+|.+|.+.|+++|++
T Consensus 123 ~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~ 191 (415)
T 2fq6_A 123 HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVA 191 (415)
T ss_dssp EEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-----CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHH
Confidence 48888899999887662 246788888765 889999888654 358888899999999999999999
Q ss_pred HHHH--cCCceeeecccc
Q psy852 220 VAKE--FDVWLHVDGAYA 235 (891)
Q Consensus 220 i~~~--~~~~lHvDaA~G 235 (891)
+|++ +|+++|+|++|+
T Consensus 192 la~~~~~g~~livD~a~a 209 (415)
T 2fq6_A 192 AVRSVVPDAIIMIDNTWA 209 (415)
T ss_dssp HHHHHCTTCEEEEECTTT
T ss_pred HHHhhcCCCEEEEECCCc
Confidence 9999 999999999884
No 168
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=98.98 E-value=9.8e-09 Score=113.87 Aligned_cols=83 Identities=7% Similarity=0.023 Sum_probs=70.7
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCC-CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~-g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++..+|.+...++...|.+++.+++|++ +.+|+++|++.+++. +.+|+++ +.+|.+.|+++|.++|+
T Consensus 81 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~~i~~l~~ 151 (393)
T 1mdo_A 81 EVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLDAIYALGE 151 (393)
T ss_dssp EEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHHHHHHHHH
T ss_pred EEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHHHHHHHHH
Confidence 4888899999999988878889999999875 689999999988653 3355443 57899999999999999
Q ss_pred HcCCceeeecccc
Q psy852 223 EFDVWLHVDGAYA 235 (891)
Q Consensus 223 ~~~~~lHvDaA~G 235 (891)
++|+++++|+|++
T Consensus 152 ~~~~~li~D~a~~ 164 (393)
T 1mdo_A 152 RYGIPVIEDAAHA 164 (393)
T ss_dssp HHTCCBCEECTTC
T ss_pred HcCCeEEEECccc
Confidence 9999999999994
No 169
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=98.98 E-value=5e-09 Score=126.53 Aligned_cols=92 Identities=16% Similarity=0.145 Sum_probs=73.2
Q ss_pred eEEEecCCCChHHHHHHHHcCCeEEEEecCCC-----Ccc-----cHHHHHHHHHhhhhcCCcceEEEeecccCcccccc
Q psy852 143 LMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-----NSL-----RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFD 212 (891)
Q Consensus 143 ~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~-----g~i-----d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavD 212 (891)
..|++...+|.|+..++.+.|.++++++++.+ +.+ |+++|+++|++.... +.|.+|++|.+ |.+|.+-
T Consensus 236 D~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~-k~p~~vivt~p-n~~G~v~ 313 (715)
T 3n75_A 236 STILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLY 313 (715)
T ss_dssp CEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCCBCCCCGGGGSHHHHHHHHHHSTTC-CSCSEEEEESS-CTTSEEE
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEeccccccccccCcccccCCHHHHHHHHhhCcCc-cCceEEEEECC-CCCCccC
Confidence 35889999999999999888889999987532 224 899999999874321 22557777777 8899999
Q ss_pred CHHHHHHHHHHcCCceeeeccccCCc
Q psy852 213 NLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 213 pl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
|+++|+++|+++ .+++|.|||+.+
T Consensus 314 dl~~I~ela~~~--~livDEAH~~~~ 337 (715)
T 3n75_A 314 NTDFIKKTLDVK--SIHFDSAWVPYT 337 (715)
T ss_dssp CHHHHHHHCCCS--EEEEECTTCTTG
T ss_pred CHHHHHHHhCcC--cEEEcccccccc
Confidence 999999999865 379999997654
No 170
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=98.98 E-value=7.6e-09 Score=115.67 Aligned_cols=272 Identities=11% Similarity=0.006 Sum_probs=162.4
Q ss_pred HHHHHHHHhhccCCccccccCC-CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHH-HHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDV-RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCV-EKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~i-tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv-~Kaa~ 524 (891)
++.+.+++.+...+.-+++ + ++|+++++..++.+... ++ +++++...|... .+.+.
T Consensus 82 ~~~~~la~~~g~~~~~~i~--~~t~g~t~al~~~~~~l~~-------------------~g-v~~v~~~~~~~~~~~~~~ 139 (398)
T 2fyf_A 82 RVRSGLAELFSLPDGYEVI--LGNGGATAFWDAAAFGLID-------------------KR-SLHLTYGEFSAKFASAVS 139 (398)
T ss_dssp HHHHHHHHHTTCCTTCEEE--EEETCHHHHHHHHHHHTCS-------------------SC-EEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceEE--EeCCchhHHHHHHHHHhcC-------------------CC-eEEEeCCHHHHHHHHHHH
Confidence 4555666666543223566 5 88999999988766410 11 233466666432 22344
Q ss_pred Hc--CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEE---EecCCccc-----hhh-----hhcC----------C
Q psy852 525 MA--FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFV---STTLGTTS-----CYR-----KSQG----------I 579 (891)
Q Consensus 525 l~--gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~V---vataGTT~-----c~~-----~ldG----------i 579 (891)
.. |.+++.||++ +|.++..+ +++. ...+++ .+..|+.. +.. .+|+ +
T Consensus 140 ~~~~g~~~~~v~~~-~g~~~~~~----i~~~----~~~v~~~~~~nptG~~~~~~~i~~~~~~~vivD~a~~~~~~~~~~ 210 (398)
T 2fyf_A 140 KNPFVGEPIIITSD-PGSAPEPQ----TDPS----VDVIAWAHNETSTGVAVAVRRPEGSDDALVVIDATSGAGGLPVDI 210 (398)
T ss_dssp HCTTSCCCEEEECC-TTCCCCCC----CCTT----CSEEEEESEETTTTEECCCCCCTTCC-CEEEEECTTTTTTSCCCG
T ss_pred HhCCCCceEEEecC-CCCCCCcc----ccCC----CCEEEEeCcCCCcceecchHHhhhhcCCeEEEEeccccCCcccCc
Confidence 44 6788889887 44443221 2221 112222 22355544 110 1221 2
Q ss_pred CCccEEEEcCcccCCcccccEEEEEeCCccchhhhc-------cCCCccccCCC-CCccccCCccccccc-ccchHHHHH
Q psy852 580 EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-------VDPLYLQHGHE-GAIDYRHWGIPLSRR-FRSLKLWFV 650 (891)
Q Consensus 580 ~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~-------~~~~Yl~~~~e-~~~~~~~~ti~~SRr-~~aL~lW~~ 650 (891)
+.+|.+++++||+++.|.++|+++++++. +. .+. ..+.|+..+.. .... ..... .+-. ...+.+..+
T Consensus 211 ~~~di~~~s~sK~~~~~gg~g~l~~~~~~-~~-~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~t~~~~~~~a~~~a 286 (398)
T 2fyf_A 211 AETDAYYFAPQKNFASDGGLWLAIMSPAA-LS-RIEAIAATGRWVPDFLSLPIAVENSL-KNQTY-NTPAIATLALLAEQ 286 (398)
T ss_dssp GGCSEEEECTTSTTCSCSSEEEEEECHHH-HH-HHHHHHHTTCCCCGGGCHHHHHHHHT-TTCCS-SCCCHHHHHHHHHH
T ss_pred ccCcEEEEecCcccCCCCceEEEEECHHH-HH-HhhcccccCCCCCcEEehHHHhhhcc-cCCCC-CCCCHHHHHHHHHH
Confidence 34799999999999988779998887642 22 111 01122211000 0000 00000 1111 122355667
Q ss_pred HHHHHHhh-HHHHHHHHHHHHHHHHHHhccCCCcEEeC-CC--cee-EEEEEecCCcchhhhhhHHHHHHHHHhCCcEEE
Q psy852 651 IRTYGLSG-LQKYIRRHCELAKLFEGKVRRDPRFEISN-DV--RLG-LVCFRLRSENNLIADQNNRKLLEDINASGRLHM 725 (891)
Q Consensus 651 L~~lG~~G-~~~~i~~~~~lA~~L~~~L~~~~~~eil~-~~--~~~-iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~ 725 (891)
++.+...| +++..++..++++++.+.|++.+++++.. ++ ..+ +++|++++ +....++.+.|.++|+.+.
T Consensus 287 l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~L~~~gI~v~ 360 (398)
T 2fyf_A 287 IDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD------DVDAGTVAKILRANGIVDT 360 (398)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT------TSCHHHHHHHHHHTTCBCC
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC------CCCHHHHHHHHHHCCcEEe
Confidence 77666666 89999999999999999999988999875 23 356 89999842 1235678899988898754
Q ss_pred eeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 726 VPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 726 s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.+....+...+ ++++.++|++|++++++.|+++.
T Consensus 361 ~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l 395 (398)
T 2fyf_A 361 EPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVV 395 (398)
T ss_dssp SCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred cCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 33222234567 99999999999999999998875
No 171
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.98 E-value=1.1e-08 Score=114.40 Aligned_cols=84 Identities=13% Similarity=0.013 Sum_probs=54.3
Q ss_pred EEEecCCCChHHH-HHHH--HcCC--eEEEEecC-CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHH
Q psy852 144 MAYCSKEAHSCVE-KAAM--MAFV--RLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEI 217 (891)
Q Consensus 144 ~v~~S~~~H~Sv~-kaa~--~~~~--~v~~V~~d-~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I 217 (891)
.|+++..+|.++. ..+. ..+. +.+.++++ +++.+|+++|++.+++.. +.+|+++..++ |...++++|
T Consensus 120 ~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~i 192 (425)
T 3ecd_A 120 TVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFARF 192 (425)
T ss_dssp EEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHHHH
T ss_pred EEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHHHH
Confidence 4777788888833 3332 3333 55566666 458999999999997532 33555554333 899999999
Q ss_pred HHHHHHcCCceeeeccc
Q psy852 218 GPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 218 ~~i~~~~~~~lHvDaA~ 234 (891)
+++|+++|++|++|.++
T Consensus 193 ~~l~~~~~~~li~De~~ 209 (425)
T 3ecd_A 193 RAIADSVGAKLMVDMAH 209 (425)
T ss_dssp HHHHHHHTCEEEEECGG
T ss_pred HHHHHHcCCEEEEECcC
Confidence 99999999999999996
No 172
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=98.97 E-value=2.1e-08 Score=111.64 Aligned_cols=85 Identities=18% Similarity=0.173 Sum_probs=72.6
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|.+...++...+.+++.++. +|+++|++.+++... + .+.+|+.+..+|.+|.+.|+++|+++|++
T Consensus 129 ~V~~~~p~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~-~-~~~~v~~~~~~nptG~~~~~~~l~~~~~~ 201 (398)
T 3a2b_A 129 YILLDERDHASIIDGSRLSFSKVIKYGH-----NNMEDLRAKLSRLPE-D-SAKLICTDGIFSMEGDIVNLPELTSIANE 201 (398)
T ss_dssp EEEEETTCCHHHHHHHHHSSSEEEEECT-----TCHHHHHHHHHTSCS-S-SCEEEEEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEEECCccCHHHHHHHHHcCCceEEeCC-----CCHHHHHHHHHhhcc-C-CceEEEEeCCCCCCCCccCHHHHHHHHHH
Confidence 4888889999999999888889999886 689999999976421 1 35677778889999999999999999999
Q ss_pred cCCceeeecccc
Q psy852 224 FDVWLHVDGAYA 235 (891)
Q Consensus 224 ~~~~lHvDaA~G 235 (891)
+|+++++|.+|+
T Consensus 202 ~~~~li~De~~~ 213 (398)
T 3a2b_A 202 FDAAVMVDDAHS 213 (398)
T ss_dssp HTCEEEEECTTT
T ss_pred cCcEEEEECCCc
Confidence 999999999994
No 173
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=98.97 E-value=8.7e-09 Score=113.33 Aligned_cols=253 Identities=11% Similarity=0.018 Sum_probs=161.9
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+.+.+++.+...+.-+++ +++|+++++..++.+... +.-.|+++...|.+...++...|
T Consensus 72 l~~~la~~~g~~~~~~i~--~~~g~t~a~~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g 130 (367)
T 3euc_A 72 LRAKLKEVMQVPAGMEVL--LGNGSDEIISMLALAAAR-------------------PGAKVMAPVPGFVMYAMSAQFAG 130 (367)
T ss_dssp HHHHHHHHHTCCTTCEEE--EEEHHHHHHHHHHHHTCC-------------------TTCEEEEEESCSCCSCHHHHTTT
T ss_pred HHHHHHHHhCCCCcceEE--EcCCHHHHHHHHHHHHcC-------------------CCCEEEEcCCCHHHHHHHHHHcC
Confidence 334445555431222556 688999999887765311 11247777888888888888889
Q ss_pred ceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-------hcCC-------
Q psy852 528 VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-------SQGI------- 579 (891)
Q Consensus 528 v~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-------ldGi------- 579 (891)
.+++.+|.++++.+|+++|+++|++.. ...++++ +..|+.. |.++ +|.+
T Consensus 131 ~~~~~v~~~~~~~~d~~~l~~~l~~~~---~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~ 207 (367)
T 3euc_A 131 LEFVGVPLRADFTLDRGAMLAAMAEHQ---PAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE 207 (367)
T ss_dssp CEEEEEECCTTSCCCHHHHHHHHHHHC---CSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSC
T ss_pred CeEEEecCCCCCCCCHHHHHHHhhccC---CCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhccc
Confidence 999999999999999999999998721 1123332 2255552 4333 1211
Q ss_pred --------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 580 --------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 580 --------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
...+-+..+.||+++....+|+++..++ .+ +.+. .... ++ ...+.+++.
T Consensus 208 ~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~-~~-~~~~~~~~~--------------~~------~~~~~~~a~ 265 (367)
T 3euc_A 208 SWMSRLTDFGNLLVMRTVSKLGLAGIRLGYVAGDPQ-WL-EQLDKVRPP--------------YN------VNVLTEATA 265 (367)
T ss_dssp CSGGGGGTCTTEEEEEECCCTTSCSCCEEEEEECHH-HH-HHHGGGCCS--------------SC------CCHHHHHHH
T ss_pred chHHHHhhCCCEEEEecchhhcccccCceeeeeCHH-HH-HHHHHhCCC--------------CC------CCHHHHHHH
Confidence 1123567789999554567888887432 22 2221 1110 11 112333333
Q ss_pred HHHHH-HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc
Q psy852 651 IRTYG-LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS 729 (891)
Q Consensus 651 L~~lG-~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~ 729 (891)
...+. .+.+.+..++..++++++.+.|++.+++++. ++..+.+++++. ..+.+.+.|.+.|+.+..+..
T Consensus 266 ~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~---------~~~~l~~~l~~~gi~v~~~~~ 335 (367)
T 3euc_A 266 LFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP---------DAAQTFDRLLARKVLIKNVSK 335 (367)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS---------CHHHHHHHHHTTTEECEECGG
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC---------CHHHHHHHHHHCCeEEEECCc
Confidence 33332 4457888888999999999999999899854 455667777774 246788889889988654443
Q ss_pred c--cCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 730 Q--EQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 730 ~--~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
. .....+ ++++ |++|+++++++|++++
T Consensus 336 ~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 336 MHPLLANCLRVTVS---TPEENAQFLEAFAASL 365 (367)
T ss_dssp GCGGGTTEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred cCCCCCCEEEEecC---CHHHHHHHHHHHHHHh
Confidence 2 234556 8866 8999999999998764
No 174
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=98.97 E-value=2.4e-08 Score=110.05 Aligned_cols=152 Identities=9% Similarity=0.029 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSL 109 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~ 109 (891)
.+.+...+...+-+ ....|...+...+++..+.+++.+..|++.+. +.+ .++
T Consensus 44 ~~~v~~a~~~~~~~-~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~-------------~~v--------------~~~ 95 (370)
T 2z61_A 44 PKPIVDEGIKSLKE-GKTHYTDSRGILELREKISELYKDKYKADIIP-------------DNI--------------IIT 95 (370)
T ss_dssp CHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG-------------GGE--------------EEE
T ss_pred CHHHHHHHHHHHHc-CccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-------------hhE--------------EEC
Confidence 35554444333322 22223333446789999999999988865431 111 135
Q ss_pred cchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhh
Q psy852 110 GGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQD 189 (891)
Q Consensus 110 ~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~ 189 (891)
+||+.........+ . . +...|++..-+|++...++...+.+++.++ +|+++|++.+++.
T Consensus 96 ~g~~~a~~~~~~~~-~-~-------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d~~~l~~~l~~~ 154 (370)
T 2z61_A 96 GGSSLGLFFALSSI-I-D-------------DGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FTVESLEEALSDK 154 (370)
T ss_dssp SSHHHHHHHHHHHH-C-C-------------TTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SSHHHHHHHCCSS
T ss_pred CChHHHHHHHHHHh-c-C-------------CCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CCHHHHHHhcccC
Confidence 67764332222222 1 1 112477888899999988877778888887 7999999988642
Q ss_pred hhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCC
Q psy852 190 ETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 190 ~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+.+|+++..+|.+|.+-|++ |.++|+++|+++++|.+++++
T Consensus 155 ------~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~ 195 (370)
T 2z61_A 155 ------TKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGL 195 (370)
T ss_dssp ------EEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTC
T ss_pred ------ceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhc
Confidence 34666778899999999999 999999999999999999653
No 175
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=98.97 E-value=4.4e-08 Score=110.52 Aligned_cols=272 Identities=9% Similarity=0.026 Sum_probs=165.8
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+.+.+++.+.. + +++ +++|+++++..++.+.+ + .-.|+++..+|.+...++...|
T Consensus 57 l~~~la~~~~~-~--~v~--~~~ggt~al~~~l~~l~----~----------------gd~Vlv~~~~~~~~~~~~~~~G 111 (424)
T 2po3_A 57 FEERVAGLAGV-R--HAV--ATCNATAGLQLLAHAAG----L----------------TGEVIMPSMTFAATPHALRWIG 111 (424)
T ss_dssp HHHHHHHHHTS-S--EEE--EESCHHHHHHHHHHHHT----C----------------CSEEEEESSSCTHHHHHHHHTT
T ss_pred HHHHHHHHhCC-C--eEE--EeCCHHHHHHHHHHHcC----C----------------CCEEEECCCccHHHHHHHHHcC
Confidence 33344555543 2 455 78899999999887753 0 0248888899999999988899
Q ss_pred ceEEEecCCC-CCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcCC-------------C
Q psy852 528 VRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQGI-------------E 580 (891)
Q Consensus 528 v~v~~Vp~d~-~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldGi-------------~ 580 (891)
.+++.+|+++ ++.+|+++|+++|++.+ ..++++...|+.. |.++ +|.+ .
T Consensus 112 ~~~~~v~~~~~~~~~d~~~l~~~i~~~~----~~v~~~~~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~ 187 (424)
T 2po3_A 112 LTPVFADIDPDTGNLDPDQVAAAVTPRT----SAVVGVHLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGS 187 (424)
T ss_dssp CEEEEECBCTTTSSBCHHHHGGGCCTTE----EEEEEECGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS
T ss_pred CEEEEEecCCCcCCcCHHHHHHhhCcCC----cEEEEECCCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeeccc
Confidence 9999999986 78899999999886532 2334445566654 4331 1211 1
Q ss_pred CccEEEEcCc--ccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhh
Q psy852 581 YADSFNVNVN--KWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSG 658 (891)
Q Consensus 581 ~aDSIs~d~H--K~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G 658 (891)
..|-+..++| |++.. ...|+++.++++.+......... +....+.... .....++..+..+..+. ..++
T Consensus 188 ~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~~~~----~~~~~~~~~~--~g~~~~~~~~~aa~~l~--~~~~ 258 (424)
T 2po3_A 188 LGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRALHNF----GFDLPGGSPA--GGTNAKMSEAAAAMGLT--SLDA 258 (424)
T ss_dssp SSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHHBT----TTTCTTCCTT--CCCBCCCCHHHHHHHHH--HHHH
T ss_pred ccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHHHhc----Cccccccccc--cCcCCCcCHHHHHHHHH--HHHH
Confidence 1355556655 98775 56677776644432221111000 0000011000 11112334444444443 3466
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc-----eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc--cc
Q psy852 659 LQKYIRRHCELAKLFEGKVRRDPRFEISNDVR-----LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS--QE 731 (891)
Q Consensus 659 ~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~-----~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~--~~ 731 (891)
+++..++..++++++.+.|++++++++..++. ..++.|.+++. ..+.....+.+.|.+.|+.....+. ..
T Consensus 259 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~l~~~L~~~gI~v~~~~~~~~~ 335 (424)
T 2po3_A 259 FPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEA---TTGIHRDLVMEVLKAEGVHTRAYFSPGCH 335 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHH---HHSSCHHHHHHHHHHTTEECBCTTCSCGG
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCc---cchhhHHHHHHHHHHCCCceecccCCccc
Confidence 78888889999999999999988998876332 25666777420 0011356788888889987432111 00
Q ss_pred ------C-------------CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 ------Q-------------NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 ------g-------------~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+ ...+ ++++..+|++||++++++|+++..
T Consensus 336 ~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~ 384 (424)
T 2po3_A 336 ELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCAT 384 (424)
T ss_dssp GSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHH
T ss_pred cchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHh
Confidence 0 1125 767789999999999999998864
No 176
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=98.95 E-value=1e-08 Score=114.87 Aligned_cols=82 Identities=11% Similarity=0.167 Sum_probs=68.5
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.+....+ ...|.+++.++. .|+++|++.+++. +.+|+++..+|.+|.+.|+++|++
T Consensus 100 ~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~ 168 (389)
T 3acz_A 100 HLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT-----SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAV 168 (389)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-----TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-----CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHH
Confidence 4788888999887764 446788999886 3899999888654 357888899999999999999999
Q ss_pred HHHHcCCceeeeccccC
Q psy852 220 VAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG 236 (891)
+|+++|+++++|.||++
T Consensus 169 ~~~~~~~~livD~~~~~ 185 (389)
T 3acz_A 169 VCHERGARLVVDATFTS 185 (389)
T ss_dssp HHHHHTCEEEEECTTTC
T ss_pred HHHHcCCEEEEECCCcc
Confidence 99999999999999854
No 177
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=98.95 E-value=4e-08 Score=107.90 Aligned_cols=89 Identities=11% Similarity=0.088 Sum_probs=76.8
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++..+|.+....+...+.+++.++.++++.+|+++|++.+++. +.+|+++..+|.+|.+-|++++.++++.
T Consensus 110 ~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~ 183 (363)
T 3ffh_A 110 NTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQAFLDR 183 (363)
T ss_dssp EEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTT
T ss_pred EEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHh
Confidence 3777778999999888777889999999989999999999998654 4577778889999999999999999988
Q ss_pred c--CCceeeeccccCCc
Q psy852 224 F--DVWLHVDGAYAGSS 238 (891)
Q Consensus 224 ~--~~~lHvDaA~GG~~ 238 (891)
+ |+++++|.+|+++.
T Consensus 184 ~~~~~~li~De~~~~~~ 200 (363)
T 3ffh_A 184 VPSDVLVVLDEAYIEYV 200 (363)
T ss_dssp SCTTSEEEEECTTGGGC
T ss_pred CCCCcEEEEeCchHhhc
Confidence 8 89999999996543
No 178
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=98.95 E-value=4.2e-08 Score=113.90 Aligned_cols=166 Identities=11% Similarity=0.010 Sum_probs=115.4
Q ss_pred HHHHHHHHHhcCC---CCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 32 SVLADMLSDAIGC---IGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 32 ~~~~~~l~~~~n~---~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
.++......+.+. ....|..++...++.+.+.+++++..|++.+. ++++ .
T Consensus 110 ~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-------------~~i~--------------~ 162 (500)
T 3tcm_A 110 DSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANA-------------DDIF--------------L 162 (500)
T ss_dssp HHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG-------------GGEE--------------E
T ss_pred HHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc-------------ccEE--------------E
Confidence 3454444444332 23345555566789999999999998876431 1111 3
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCC--CcccHHHHHHHH
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK--NSLRGATLRQVM 186 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~--g~id~~~L~~~l 186 (891)
++||+. .+..++...... +...|+++.-+|.+...++...+.+++.+++|++ +.+|+++|++.|
T Consensus 163 t~G~~~-al~~~~~~l~~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 228 (500)
T 3tcm_A 163 TDGASP-GVHLMMQLLIRN-------------EKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQL 228 (500)
T ss_dssp ESSSHH-HHHHHHHHHCCS-------------TTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHH
T ss_pred cCCHHH-HHHHHHHHHcCC-------------CCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHH
Confidence 456653 322222211101 1234888889999999998888889999998875 489999999999
Q ss_pred HhhhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 187 QQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 187 ~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
++...+|..+.+|+++..+|.||.+-+ +.+|+++|+++|+++++|.||+++.
T Consensus 229 ~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~ 283 (500)
T 3tcm_A 229 EDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENI 283 (500)
T ss_dssp HHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred HHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccc
Confidence 987666656767777788999999954 6677777999999999999996643
No 179
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=98.95 E-value=3.6e-08 Score=109.75 Aligned_cols=257 Identities=9% Similarity=0.045 Sum_probs=161.6
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+++++++.+.. + +++ +++|+++++..++.++.. +.-.|+++...|.+...++...|
T Consensus 93 l~~~la~~~g~-~--~v~--~~~ggt~a~~~~~~~~~~-------------------~gd~V~~~~p~~~~~~~~~~~~g 148 (398)
T 3a2b_A 93 LEEKLSAYVGK-E--AAI--LFSTGFQSNLGPLSCLMG-------------------RNDYILLDERDHASIIDGSRLSF 148 (398)
T ss_dssp HHHHHHHHHTC-S--EEE--EESSHHHHHHHHHHHSSC-------------------TTCEEEEETTCCHHHHHHHHHSS
T ss_pred HHHHHHHHhCC-C--cEE--EECCHHHHHHHHHHHHhC-------------------CCCEEEECCccCHHHHHHHHHcC
Confidence 34445554443 2 455 788999999988776511 12358888999999999999999
Q ss_pred ceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------hhhh-----h-----c---------
Q psy852 528 VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------CYRK-----S-----Q--------- 577 (891)
Q Consensus 528 v~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c~~~-----l-----d--------- 577 (891)
.+++.+|. +|+++|++++++........+++... .|++. |.++ + .
T Consensus 149 ~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~ 223 (398)
T 3a2b_A 149 SKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAG 223 (398)
T ss_dssp SEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCC
T ss_pred CceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCc
Confidence 99999987 68999999998632101112222222 34443 3331 1 1
Q ss_pred -----CC-CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-CCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 578 -----GI-EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 578 -----Gi-~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
++ +++|.+..++||+++ |.| |+++.+++ .+ +.+.. ...|.... + ........+..+
T Consensus 224 ~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~~~-~~-~~l~~~~~~~~~~~----------~---~~~~~~a~~~~~ 286 (398)
T 3a2b_A 224 TASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGDAD-VI-DFLKHNARSVMFSA----------S---MTPASVASTLKA 286 (398)
T ss_dssp HHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEECHH-HH-HHHHHHCHHHHSSB----------C---CCHHHHHHHHHH
T ss_pred hHhhcCCCcCCeEEEeccccccc-CCC-cEEEeCHH-HH-HHHHHhcccceecC----------C---CCHHHHHHHHHH
Confidence 11 136899999999998 666 88877542 22 22211 11111000 0 011111122334
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 651 IRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 651 L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
|+.+ +.+.+..++..++++++.+.|++. ++++.. +..+++++.++. +....++.+.|.++|+.+..+...
T Consensus 287 l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~g~~~~~~~~~------~~~~~~l~~~l~~~gi~v~~~~~~ 356 (398)
T 3a2b_A 287 LEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLGA-TESPILPIFIRS------NEKTFWVTKMLQDDGVFVNPVVSP 356 (398)
T ss_dssp HHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBCS-CCSSEEEEECCC------HHHHHHHHHHHHHTTEECEEECTT
T ss_pred HHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcCC-CCCCEEEEEcCC------HHHHHHHHHHHHHCCcEEEeeCCC
Confidence 4432 234567778888999999999887 777654 456788888742 224567889998889875544332
Q ss_pred ---cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 ---EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 ---~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+...+ ++++..+++++++++++.|++++.
T Consensus 357 ~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 390 (398)
T 3a2b_A 357 AVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFK 390 (398)
T ss_dssp TSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 134566 999988999999999999998763
No 180
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=98.95 E-value=2.7e-08 Score=112.26 Aligned_cols=82 Identities=9% Similarity=0.095 Sum_probs=69.4
Q ss_pred EEEecCCCChHHHH----HHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEK----AAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~k----aa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.+... .+...|.+++.++.+ |+++|++.+++. +.+|+++..+|.+|.+.|+++|++
T Consensus 103 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~ 171 (404)
T 1e5e_A 103 HLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCK 171 (404)
T ss_dssp EEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHH
Confidence 47888899999888 455677899999876 889999888653 457888899999999999999999
Q ss_pred HHHH-cCCceeeeccccC
Q psy852 220 VAKE-FDVWLHVDGAYAG 236 (891)
Q Consensus 220 i~~~-~~~~lHvDaA~GG 236 (891)
+|++ +|+++++|.+|+.
T Consensus 172 la~~~~~~~li~De~~~~ 189 (404)
T 1e5e_A 172 DAHSQEGVLVIADNTFCS 189 (404)
T ss_dssp HHHTSTTCEEEEECTTTC
T ss_pred HHHhhcCCEEEEECCCch
Confidence 9999 9999999998843
No 181
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=98.94 E-value=3.1e-08 Score=108.32 Aligned_cols=87 Identities=11% Similarity=-0.040 Sum_probs=72.9
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVA 221 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~ 221 (891)
|+++.-+|.+...++...|.+++.+++++++.+++++|++.+++ . .+|+++..+|.+|.+-| +.+|+++|
T Consensus 101 vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~ 173 (361)
T 3ftb_A 101 ILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLA 173 (361)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHH
T ss_pred EEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHh
Confidence 77777889999888887788999999999999999999998865 2 36777888999999976 56677788
Q ss_pred HHcCCceeeeccccCCc
Q psy852 222 KEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 222 ~~~~~~lHvDaA~GG~~ 238 (891)
+++|+++++|.+++++.
T Consensus 174 ~~~~~~li~De~~~~~~ 190 (361)
T 3ftb_A 174 EEKKKTIIIDEAFIEFT 190 (361)
T ss_dssp HHHTCEEEEECSSGGGT
T ss_pred hhcCCEEEEECcchhhc
Confidence 89999999999996543
No 182
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=98.94 E-value=2.7e-08 Score=110.57 Aligned_cols=157 Identities=9% Similarity=-0.025 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSL 109 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~ 109 (891)
.|.+...+...+ ......|.......++++.+.+++++..|++.+. +.+ .++
T Consensus 46 ~~~v~~a~~~~~-~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-------------~~v--------------~~t 97 (391)
T 3h14_A 46 PRGAVEALAKSL-ETDALGYTVALGLPALRQRIARLYGEWYGVDLDP-------------GRV--------------VIT 97 (391)
T ss_dssp CHHHHHHHHHHH-C----------CCHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EEE
T ss_pred CHHHHHHHHHHH-hcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCH-------------HHE--------------EEe
Confidence 455555544433 3222233223335789999999999999976431 111 145
Q ss_pred cchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCC--cccHHHHHHHHH
Q psy852 110 GGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKN--SLRGATLRQVMQ 187 (891)
Q Consensus 110 ~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g--~id~~~L~~~l~ 187 (891)
+||+...++.+..+ . . +...|++..-+|.+...++...+.+++.+++++++ .+|+++|++.
T Consensus 98 ~g~~~al~~~~~~l-~-~-------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~-- 160 (391)
T 3h14_A 98 PGSSGGFLLAFTAL-F-D-------------SGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL-- 160 (391)
T ss_dssp SSHHHHHHHHHHHH-C-C-------------TTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS--
T ss_pred cChHHHHHHHHHHh-c-C-------------CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc--
Confidence 67765433332222 1 1 11237777888999998888788899999998754 6899999876
Q ss_pred hhhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 188 QDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 188 ~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
. +.+|+++..+|.+|.+-| +++|+++|+++|+++++|.+|+++.
T Consensus 161 -~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 207 (391)
T 3h14_A 161 -D------LAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIE 207 (391)
T ss_dssp -C------CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCB
T ss_pred -C------CeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcc
Confidence 1 346777788999999988 8889999999999999999996543
No 183
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=98.94 E-value=1.2e-08 Score=111.60 Aligned_cols=273 Identities=13% Similarity=0.072 Sum_probs=164.3
Q ss_pred HHHHHHHhhccCCccccccCCCCCc-chhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSA-SECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsgg-sean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
+.+.+++.+...+.-+++ +++|+ ++++..++...-. .| .+..+|+++...|++... +...
T Consensus 53 l~~~la~~~g~~~~~~v~--~~~g~gt~al~~~~~~l~~--------------~~--~~g~~vi~~~~~~~~~~~-~~~~ 113 (360)
T 1w23_A 53 AQNLLRELLQIPNDYQIL--FLQGGASLQFTMLPMNLLT--------------KG--TIGNYVLTGSWSEKALKE-AKLL 113 (360)
T ss_dssp HHHHHHHHHTCCTTEEEE--EESSHHHHHHHHHHHHHCC--------------TT--CEEEEEECSHHHHHHHHH-HHTT
T ss_pred HHHHHHHHhCCCCCceEE--EECCcchHHHHHHHHHhcC--------------CC--CcccEEEecchhHHHHHH-HHHh
Confidence 444555555543222555 67777 8888776654211 01 122367888889988544 4555
Q ss_pred CceEEEecCCC-CCCcCHHHHHH-HHHhhhhcCCccEEEE---ecCCccc---hhh-----hhcC----------CCCcc
Q psy852 527 FVRLKILEPDD-KNSLRGATLRQ-VMQQDETMGYIPFFVS---TTLGTTS---CYR-----KSQG----------IEYAD 583 (891)
Q Consensus 527 gv~v~~Vp~d~-~G~mD~~~Le~-aI~~d~~~g~ip~~Vv---ataGTT~---c~~-----~ldG----------i~~aD 583 (891)
| +++.+|.++ +|.+|+++|++ +|++.+ ..++++ +..|... +.+ .+|+ +...|
T Consensus 114 g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~----k~v~~~~~~nptG~~~~~i~~~~~~~li~D~a~~~~~~~~~~~~~d 188 (360)
T 1w23_A 114 G-ETHIAASTKANSYQSIPDFSEFQLNEND----AYLHITSNNTIYGTQYQNFPEINHAPLIADMSSDILSRPLKVNQFG 188 (360)
T ss_dssp S-EEEEEEECGGGTSCSCCCGGGCCCCTTE----EEEEEESEETTTTEECSSCCCCCSSCEEEECTTTTTSSCCCGGGCS
T ss_pred C-CeEEeecccccCcCCccchHhhccCCCC----CEEEEeCCCCCcceecccccccCCceEEEechhhcCCCCcCcccCC
Confidence 7 999999986 77899999988 775422 122222 2356542 111 1121 22238
Q ss_pred EEEEcCcccCCcccccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCccccccc-ccchHHHHHHHHHHHh-hHH
Q psy852 584 SFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRTYGLS-GLQ 660 (891)
Q Consensus 584 SIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~lG~~-G~~ 660 (891)
.++.++||+++ |.|+|+++++++. + +.+. ....|+.... ........ ++-. ...+.+..+++.+... +++
T Consensus 189 i~~~s~sK~~~-~~G~G~~~~~~~~-~-~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~al~~~~~~~~~~ 261 (360)
T 1w23_A 189 MIYAGAQKNLG-PSGVTVVIVKKDL-L-NTKVEQVPTMLQYAT---HIKSDSLY-NTPPTFSIYMLRNVLDWIKDLGGAE 261 (360)
T ss_dssp EEEEETTTTTS-CTTCEEEEEEHHH-H-CSCCTTCCGGGCHHH---HHHTTTCS-SCCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred EEEEEcccccC-CCCcEEEEEcHHH-H-hhcccCCcchhhhhh---hhhccCCC-CCCCHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999887 7799999998652 1 1111 1111110000 00000000 1111 1223455566665555 788
Q ss_pred HHHHHHHHHHHHHHHHhccCCCc-EEeCCC--cee-EEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE
Q psy852 661 KYIRRHCELAKLFEGKVRRDPRF-EISNDV--RLG-LVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV 736 (891)
Q Consensus 661 ~~i~~~~~lA~~L~~~L~~~~~~-eil~~~--~~~-iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l 736 (891)
++.++..++++++.+.|++.+++ ....++ ..+ +++|++++. ....++.+.|.+.|+....+.. ....+
T Consensus 262 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~gi~~~~~~~--~~~~i 333 (360)
T 1w23_A 262 AIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------ELNQQFLAKAKEQGFVGLNGHR--SVGGC 333 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH------HHHHHHHHHHHHTTEESCBCCT--TTCSE
T ss_pred HHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC------ccHHHHHHHHHHCCeeeecCCC--CCCeE
Confidence 89999999999999999998765 654223 345 888988531 2346788888889987533222 13346
Q ss_pred -EEecCCCCHHHHHHHHHHHHHHH
Q psy852 737 -FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 737 -~sv~~~tT~edId~li~~L~ei~ 759 (891)
++++..++++|++++++.|+++.
T Consensus 334 Ris~~~~~~~~~i~~~~~~l~~~~ 357 (360)
T 1w23_A 334 RASIYNAVPIDACIALRELMIQFK 357 (360)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999998765
No 184
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.94 E-value=1.1e-08 Score=113.45 Aligned_cols=247 Identities=12% Similarity=0.039 Sum_probs=157.7
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC--CCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~--~G~ 540 (891)
+++ +++|+++++..++.+... +.-.|+++..+|.+...++...|.+++.+|.++ ++.
T Consensus 92 ~v~--~~~g~~~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 150 (388)
T 1j32_A 92 NIL--VTNGGKQSIFNLMLAMIE-------------------PGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFK 150 (388)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTC
T ss_pred hEE--EcCCHHHHHHHHHHHhcC-------------------CCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCC
Confidence 455 678999999988876521 112578888899999999888899999999875 578
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C--------C----C
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G--------I----E 580 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G--------i----~ 580 (891)
+|+++|+++|++++ ..++++. ..|... |.++ +| | + .
T Consensus 151 ~d~~~l~~~l~~~~----~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 226 (388)
T 1j32_A 151 VSPEQIRQAITPKT----KLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAY 226 (388)
T ss_dssp CCHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHH
T ss_pred CCHHHHHHhcCcCc----eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHcccccc
Confidence 99999999997531 1222222 245542 3331 22 1 1 1
Q ss_pred CccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH--HHh
Q psy852 581 YADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY--GLS 657 (891)
Q Consensus 581 ~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l--G~~ 657 (891)
..|.+..++||+++.| ..+|+++.+++ +.+.+.....+ ..++ ...+.+++++..+ +.+
T Consensus 227 ~~~~~~~s~sK~~~~~G~r~G~~~~~~~--~~~~l~~~~~~-----------~~~~------~~~~~~~a~~~~l~~~~~ 287 (388)
T 1j32_A 227 ERSVVCSGFAKTYAMTGWRVGFLAGPVP--LVKAATKIQGH-----------STSN------VCTFAQYGAIAAYENSQD 287 (388)
T ss_dssp HTEEEEEESTTTTTCTTTCCEEEECCHH--HHHHHHHHHHT-----------TTCS------CCHHHHHHHHHHHHSCSH
T ss_pred CCEEEEeechhccCCcccceEEEEeCHH--HHHHHHHHHhh-----------cccC------CCHHHHHHHHHHHhCCcH
Confidence 2578999999999644 33899987643 22222110000 0011 1124444444444 345
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHh-CCcEEEeeccccCCeEE
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINA-SGRLHMVPASQEQNDEV 736 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~-~G~~~~s~s~~~g~~~l 736 (891)
.+++..++..++++++.+.|++.+++++..+.....+++++... +....++.+.|.+ .|+.+..+........+
T Consensus 288 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 362 (388)
T 1j32_A 288 CVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKT-----GRSSLDFCSELLDQHQVATVPGAAFGADDCI 362 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGG-----TCCHHHHHHHHHHHHCEECEEGGGGTCTTBE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCC-----CCCHHHHHHHHHHhCCEEEeChhhhCCCCcE
Confidence 57778888899999999999998888876543333344444311 1235678888875 69876554443323456
Q ss_pred -EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 737 -FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 737 -~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+++. +++++|+++++.|+++.+
T Consensus 363 Ris~~--~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 363 RLSYA--TDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp EEECC--SCHHHHHHHHHHHHHHHH
T ss_pred EEEec--CCHHHHHHHHHHHHHHHH
Confidence 8875 689999999999987763
No 185
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=98.93 E-value=8.7e-08 Score=105.14 Aligned_cols=250 Identities=9% Similarity=0.030 Sum_probs=160.7
Q ss_pred HHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCc
Q psy852 449 AKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFV 528 (891)
Q Consensus 449 Ar~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv 528 (891)
.+.+++.+...+. +++ +++|+++++..++.+... +.-.|+++.-.|.+...++...|.
T Consensus 73 r~~la~~~~~~~~-~v~--~~~g~t~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~g~ 130 (363)
T 3ffh_A 73 RKEVADFYQLEEE-ELI--FTAGVDELIELLTRVLLD-------------------TTTNTVMATPTFVQYRQNALIEGA 130 (363)
T ss_dssp HHHHHHHHTCCGG-GEE--EESSHHHHHHHHHHHHCS-------------------TTCEEEEEESSCHHHHHHHHHHTC
T ss_pred HHHHHHHhCCChh-hEE--EeCCHHHHHHHHHHHHcc-------------------CCCEEEEcCCChHHHHHHHHHcCC
Confidence 3344444443333 566 788999999888765310 112477777889999999988899
Q ss_pred eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhh----hhcCC-----------
Q psy852 529 RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYR----KSQGI----------- 579 (891)
Q Consensus 529 ~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~----~ldGi----------- 579 (891)
+++.+|.++++.+|+++|++++++++ ..++++. ..|+.. |.+ .+|.+
T Consensus 131 ~~~~v~~~~~~~~d~~~l~~~i~~~~----~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~ 206 (363)
T 3ffh_A 131 EVREIPLLQDGEHDLEGMLNAIDEKT----TIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEK 206 (363)
T ss_dssp EEEEEECCTTSCCCHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCC
T ss_pred EEEEecCCCCCCcCHHHHHHhcccCC----CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccC
Confidence 99999999899999999999997532 1233322 245443 211 01111
Q ss_pred -------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 580 -------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 580 -------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
..-+-+..+.+|+++.| ..+|+++.++ +.. +.+. .... ++ ...+.+++.
T Consensus 207 ~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l~~~~~~--------------~~------~~~~~~~~~ 264 (363)
T 3ffh_A 207 HEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK-EII-RQLNIVRPP--------------FN------TTSIGQKLA 264 (363)
T ss_dssp CGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH-HHH-HHHHHTCCS--------------CC------CBHHHHHHH
T ss_pred HHHHhhcCCCEEEEeechhhhcCchhceeeeecCH-HHH-HHHHHhCCC--------------CC------CCHHHHHHH
Confidence 11123467888998743 4569988843 222 2221 1100 11 122334444
Q ss_pred HHHHH-HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc
Q psy852 651 IRTYG-LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS 729 (891)
Q Consensus 651 L~~lG-~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~ 729 (891)
...+. .+.+++..++..++++++.+.|++.+++++. ++..+.+++++.. ...++.+.|.++|+.+..+..
T Consensus 265 ~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~ 335 (363)
T 3ffh_A 265 IEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY-PANGNFVLIDLGI--------EAGTIFSYLEKNGYITRSGAA 335 (363)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCCSSEEEEECSS--------CHHHHHHHHHHTTEECEETTT
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC-CCCCeEEEEECCC--------CHHHHHHHHHHCCeEEEeCcc
Confidence 44442 2556777888899999999999997888876 4456678888752 356788889889987555544
Q ss_pred ccCCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 730 QEQNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 730 ~~g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
......+ ++++ |++|+++++++|+++
T Consensus 336 ~~~~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 336 LGFPTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp TTCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 3334566 8876 899999999999865
No 186
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=98.93 E-value=6.2e-09 Score=114.10 Aligned_cols=161 Identities=11% Similarity=0.094 Sum_probs=100.8
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHhcCCCC-CccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccc
Q psy852 16 QHPRFHAYFPSGNSYPSVLADMLSDAIGCIG-FSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDM 94 (891)
Q Consensus 16 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~-~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~ 94 (891)
.+..|++.-+. +..+.++.+++.......+ ..+...|...++|. ++++++|.+.. +
T Consensus 10 ~~~~~l~~~~~-p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~----~la~~~~~~~~----------i-------- 66 (357)
T 3lws_A 10 QQTTGQISGHG-KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQ----KFADVLGMDDA----------V-------- 66 (357)
T ss_dssp HTCSEESSBSS-CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHH----HHHHHHTCSEE----------E--------
T ss_pred HhhcccccCCC-CCCHHHHHHHHHHhhcccCcccccCChHHHHHHH----HHHHHhCCCcE----------E--------
Confidence 34556666544 4566677776665321111 22333466666664 67777776432 1
Q ss_pred cccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHH---HHHcCCeEEEEec
Q psy852 95 NIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA---AMMAFVRLKILEP 171 (891)
Q Consensus 95 ~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~ka---a~~~~~~v~~V~~ 171 (891)
++++|+.. +...+...... + .+.+|+++...|++.... +...+.+++.|+.
T Consensus 67 -------------~~~~G~~a-~~~al~~~~~~-g-----------d~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 120 (357)
T 3lws_A 67 -------------FFPSGTMA-QQVALRIWSDE-T-----------DNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA 120 (357)
T ss_dssp -------------EESCHHHH-HHHHHHHHHHH-H-----------TCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC
T ss_pred -------------EecCcHHH-HHHHHHHHhhc-C-----------CCcEEEecccceeeeeccchhhhccCcEEEEecC
Confidence 23577643 33222222221 1 112478888889887652 3456778888884
Q ss_pred CCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc-ccccC---HHHHHHHHHHcCCceeeeccc
Q psy852 172 DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC-CSFDN---LAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 172 d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~-GavDp---l~~I~~i~~~~~~~lHvDaA~ 234 (891)
+++.+|+++|+++.+ +.+|+++..+|.+ |.+-| +++|+++|+++|++||+|+|+
T Consensus 121 -~~~~~d~~~l~~~~~--------~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~ 178 (357)
T 3lws_A 121 -ADRLMTLDEIKALPD--------IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGAR 178 (357)
T ss_dssp -TTSCCCHHHHHTCCS--------CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred -CCCCcCHHHHhcCcC--------cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECch
Confidence 568899999998621 2356666666666 88765 889999999999999999988
No 187
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.93 E-value=2.9e-08 Score=110.33 Aligned_cols=244 Identities=8% Similarity=0.014 Sum_probs=153.0
Q ss_pred CCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHH-HH--HHcC--ceEEEecCC-CCCCcCH
Q psy852 470 SSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK-AA--MMAF--VRLKILEPD-DKNSLRG 543 (891)
Q Consensus 470 sggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~K-aa--~l~g--v~v~~Vp~d-~~G~mD~ 543 (891)
++|++++..++.++.. +.-.|+++...|.+... .+ .+.| .+++.++.+ .++.+|+
T Consensus 92 ~sGt~a~~~a~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (405)
T 2vi8_A 92 HSGAQANMAVYFTVLE-------------------HGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDY 152 (405)
T ss_dssp SSHHHHHHHHHHHHCC-------------------TTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCH
T ss_pred cCcHHHHHHHHHHhcC-------------------CCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCH
Confidence 3449999988877521 11246777778877643 11 2333 377777776 6789999
Q ss_pred HHHHHHHHhhhhcCCccEEEE-ecCCccc--------hhhh-----hc----------C-----CCCccEEEEcCcccCC
Q psy852 544 ATLRQVMQQDETMGYIPFFVS-TTLGTTS--------CYRK-----SQ----------G-----IEYADSFNVNVNKWLL 594 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~Vv-ataGTT~--------c~~~-----ld----------G-----i~~aDSIs~d~HK~L~ 594 (891)
++|+++|++.. ...++++ ...|... |.++ +| + ++.+|.+..++||+++
T Consensus 153 ~~l~~~i~~~~---~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~ 229 (405)
T 2vi8_A 153 DDVREKARLHR---PKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLR 229 (405)
T ss_dssp HHHHHHHHHHC---CSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTC
T ss_pred HHHHHHHHhcC---CeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCC
Confidence 99999998631 1122222 2234332 4331 11 1 2368999999999999
Q ss_pred cccccEEEEEeCCccchhhhcc-CCCccccCCCCCccccCCccccc-ccccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy852 595 TAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLS-RRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKL 672 (891)
Q Consensus 595 ~P~g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~~~~~ti~~S-Rr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~ 672 (891)
+|.| |+++.+++ +.+.+.. ...|. . ++ -......+..+++.+...++++..++..+++++
T Consensus 230 g~~g-G~~~~~~~--~~~~l~~~~~~~~--------------~-~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~ 291 (405)
T 2vi8_A 230 GPRG-GMILCQEQ--FAKQIDKAIFPGI--------------Q-GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKR 291 (405)
T ss_dssp CCSC-EEEEECHH--HHHHHHHHHTTTT--------------C-SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCC-eEEEEcHH--HHHHHHhhhcccc--------------c-CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 8888 88888632 2222211 00110 0 01 011222334555554556888999999999999
Q ss_pred HHHHhccCCCcEEeCC-CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc------ccCCeEE-EEecC---
Q psy852 673 FEGKVRRDPRFEISND-VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS------QEQNDEV-FELQE--- 741 (891)
Q Consensus 673 L~~~L~~~~~~eil~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~------~~g~~~l-~sv~~--- 741 (891)
+.+.|++. +++++.+ ...+++++++.+. +.....+.+.|.+.|+....+.. ......+ ++++.
T Consensus 292 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~ 365 (405)
T 2vi8_A 292 LASALQNE-GFTLVSGGTDNHLLLVDLRPQ-----QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTT 365 (405)
T ss_dssp HHHHHHHT-TCEEGGGSCSSSEEEEECGGG-----TCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHH
T ss_pred HHHHHHhC-CCeEecCCCCceEEEEEccCC-----CCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeee
Confidence 99999987 8888764 3567888888532 11345778888888987554321 1123356 88775
Q ss_pred -CCCHHHHHHHHHHHHHHH
Q psy852 742 -RKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 742 -~tT~edId~li~~L~ei~ 759 (891)
.++++|++++++.|+++.
T Consensus 366 ~~~~~~~i~~~~~~l~~~~ 384 (405)
T 2vi8_A 366 RGFGLEEMDEIAAIIGLVL 384 (405)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHH
Confidence 578999999999999876
No 188
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=98.93 E-value=1.9e-08 Score=113.53 Aligned_cols=262 Identities=12% Similarity=0.068 Sum_probs=158.1
Q ss_pred HHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH----H
Q psy852 450 KLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM----M 525 (891)
Q Consensus 450 r~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~----l 525 (891)
+.+++.+.. + +++ +++||++++..++.++. + +.-.|+++..+|.+....+. .
T Consensus 63 ~~la~~~g~-~--~~~--~~~~gt~a~~~al~~l~----~---------------~gd~vi~~~~~~~~~~~~~~~~~~~ 118 (412)
T 2cb1_A 63 ERLKALEGA-L--EAV--VLASGQAATFAALLALL----R---------------PGDEVVAAKGLFGQTIGLFGQVLSL 118 (412)
T ss_dssp HHHHHHHTC-S--EEE--EESSHHHHHHHHHHTTC----C---------------TTCEEEEETTCCHHHHHHHHHTTTT
T ss_pred HHHHHHhCC-C--cEE--EECCHHHHHHHHHHHHh----C---------------CCCEEEEeCCCchhHHHHHHHHHHH
Confidence 345555543 2 455 67899999998887641 0 12257888889988777653 3
Q ss_pred cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hc-----C-C----
Q psy852 526 AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQ-----G-I---- 579 (891)
Q Consensus 526 ~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ld-----G-i---- 579 (891)
.|++++.+|.| +++|+++|++++ ..+++. +..|... |+++ +| + .
T Consensus 119 ~g~~~~~~~~~------~~~l~~~i~~~~----~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~ 188 (412)
T 2cb1_A 119 MGVTVRYVDPE------PEAVREALSAKT----RAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRP 188 (412)
T ss_dssp TTCEEEEECSS------HHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCG
T ss_pred cCCEEEEECCC------HHHHHHHhccCC----eEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCc
Confidence 67889999875 889999887532 122222 2234443 4431 11 1 1
Q ss_pred --CCccEEEEcCcccCCcccc-cEEEEEeCCcc-chhhhccCCCccccC--------CCCCccccCCcc-cccccccchH
Q psy852 580 --EYADSFNVNVNKWLLTAFD-SSCLWVADRYK-LTSALVVDPLYLQHG--------HEGAIDYRHWGI-PLSRRFRSLK 646 (891)
Q Consensus 580 --~~aDSIs~d~HK~L~~P~g-~G~llvR~~~~-L~~~l~~~~~Yl~~~--------~e~~~~~~~~ti-~~SRr~~aL~ 646 (891)
..+|.++.++||++++|.+ +|.++++++.. ........+...... .+-......+++ ..+-...++.
T Consensus 189 ~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~ 268 (412)
T 2cb1_A 189 LAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFN 268 (412)
T ss_dssp GGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHH
T ss_pred cccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHH
Confidence 2479999999999999987 88888877431 100000000000000 000000000010 0011233455
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeC-C----------------CceeEEEEEecCCcchhhhhh
Q psy852 647 LWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN-D----------------VRLGLVCFRLRSENNLIADQN 709 (891)
Q Consensus 647 lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~-~----------------~~~~iV~Fr~~~~~~~~~d~l 709 (891)
.|+.+. +.+.+.+.+++..+++++|.+.|++.++++++. + ...++++|.+ +.
T Consensus 269 a~~~~~--~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~~-------- 337 (412)
T 2cb1_A 269 AYLLFQ--GLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-GD-------- 337 (412)
T ss_dssp HHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-SS--------
T ss_pred hHHHHc--CCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CC--------
Confidence 555554 556677888888899999999999999988552 2 1357999999 42
Q ss_pred HHHHHHHHHhCCcEEEeec---------ccc---------------C--CeEE-EEecCCCCHHHHHHHHHHHHH
Q psy852 710 NRKLLEDINASGRLHMVPA---------SQE---------------Q--NDEV-FELQERKRKDDLAYKRSFFVR 757 (891)
Q Consensus 710 n~~L~~~L~~~G~~~~s~s---------~~~---------------g--~~~l-~sv~~~tT~edId~li~~L~e 757 (891)
.+.+...|.+.|++. .++ .+. + ...+ +|++.++++++|+.+.++|++
T Consensus 338 ~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 338 LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 245666677778876 442 110 1 4567 999999999999999998864
No 189
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=98.92 E-value=3.4e-08 Score=112.71 Aligned_cols=153 Identities=12% Similarity=0.022 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHhcCCCCC-----c-cccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCC
Q psy852 30 YPSVLADMLSDAIGCIGF-----S-WAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPA 103 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~-----~-~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~ 103 (891)
.|.++..+...+.|.... . +...+....+|....+++++++|.+....
T Consensus 58 ~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~~v-------------------------- 111 (447)
T 3h7f_A 58 PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANV-------------------------- 111 (447)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEEC--------------------------
T ss_pred CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCceEE--------------------------
Confidence 566666665544332211 1 22345556777777799999999875321
Q ss_pred CCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChH-HHHH--H-HH-cCCeEEEEecC-CCCcc
Q psy852 104 NQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSC-VEKA--A-MM-AFVRLKILEPD-DKNSL 177 (891)
Q Consensus 104 ~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~S-v~ka--a-~~-~~~~v~~V~~d-~~g~i 177 (891)
.+++|+. .+...+...+. +...|+++..+|.+ +... + .. ....++.++++ +++.+
T Consensus 112 ----~~~sGs~-a~~~a~~~~~~--------------~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 172 (447)
T 3h7f_A 112 ----QPHSGAQ-ANAAVLHALMS--------------PGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLI 172 (447)
T ss_dssp ----CCSSHHH-HHHHHHHHHCC--------------TTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSC
T ss_pred ----EeCCHHH-HHHHHHHHhcC--------------CCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCc
Confidence 1346664 33333322221 11236666666655 2111 1 11 23456677776 56889
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccc
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~ 234 (891)
|+++|++.+++.. |.+|+++..++.++. |+++|+++|+++|++||+|.|+
T Consensus 173 d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~ 222 (447)
T 3h7f_A 173 DMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAH 222 (447)
T ss_dssp CHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCc
Confidence 9999999997542 335555555554443 9999999999999999999987
No 190
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.92 E-value=5.5e-08 Score=110.75 Aligned_cols=277 Identities=12% Similarity=0.058 Sum_probs=151.8
Q ss_pred HHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchH-HHHHHHHHcC
Q psy852 449 AKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHS-CVEKAAMMAF 527 (891)
Q Consensus 449 Ar~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~-Sv~Kaa~l~g 527 (891)
.+.+++.+.. + +++ +++||++++..++.+++...... |- .+..|+++ ..|+ +...++...|
T Consensus 82 ~~~la~~~~~-~--~v~--~t~ggt~A~~~al~~~~~~~~~~----------Gd--~~~~viv~-~~~~~~~~~~~~~~g 143 (467)
T 1ax4_A 82 KDKAKELFNY-D--YII--PAHQGRGAENILFPVLLKYKQKE----------GK--AKNPVFIS-NFHFDTTAAHVELNG 143 (467)
T ss_dssp HHHHHHHHCC-C--EEE--EESSHHHHHHHHHHHHHHHHHHT----------TC--CSSCEEEE-SSCCHHHHHHHHHTT
T ss_pred HHHHHHHcCC-C--cEE--EcCCcHHHHHHHHHHHHHhhccC----------CC--ccceEEEe-ccccchhhHHHhccC
Confidence 3344455543 2 455 78899999999999887633111 10 01124555 6674 4445556777
Q ss_pred ceEEEecCC----------CCCCcCHHHHHHHHHhhhhcCCccEEEE-ec---C-Cccc-----------hhhh-----h
Q psy852 528 VRLKILEPD----------DKNSLRGATLRQVMQQDETMGYIPFFVS-TT---L-GTTS-----------CYRK-----S 576 (891)
Q Consensus 528 v~v~~Vp~d----------~~G~mD~~~Le~aI~~d~~~g~ip~~Vv-at---a-GTT~-----------c~~~-----l 576 (891)
.+++.++.+ .++.+|+++|+++|++... ..+.++++ .. . |.+. |.+| .
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~-~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~ 222 (467)
T 1ax4_A 144 CKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGA-DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVM 222 (467)
T ss_dssp CEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCG-GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CceecccccccccccccCCcccccCHHHHHHHHHhcCC-CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEE
Confidence 777766542 1578999999999986420 11223332 22 3 4432 4331 2
Q ss_pred c-------------------CC----------CCccEEEEcCcccCCcccccEEEEEeCC-ccchhhhccCCCccccCCC
Q psy852 577 Q-------------------GI----------EYADSFNVNVNKWLLTAFDSSCLWVADR-YKLTSALVVDPLYLQHGHE 626 (891)
Q Consensus 577 d-------------------Gi----------~~aDSIs~d~HK~L~~P~g~G~llvR~~-~~L~~~l~~~~~Yl~~~~e 626 (891)
| |+ ..+|.+++++||+++.|.| |+++.+++ +.+.........+ .+.
T Consensus 223 De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~--~~~- 298 (467)
T 1ax4_A 223 DSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM--EGF- 298 (467)
T ss_dssp ECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH--TCS-
T ss_pred EchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc--ccc-
Confidence 2 22 2478999999999998855 55555545 4332211111111 000
Q ss_pred CCccccCCcccccccccch-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCc--c
Q psy852 627 GAIDYRHWGIPLSRRFRSL-KLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSEN--N 703 (891)
Q Consensus 627 ~~~~~~~~ti~~SRr~~aL-~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~--~ 703 (891)
..++ +.....+ .+...++..- + .+.+++..++++++.+.|++ ++++++.+.....+.+.+.... .
T Consensus 299 -----~~~~---~~~~~~~~a~~~~l~~~~-~--~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (467)
T 1ax4_A 299 -----VTYG---GLAGRDMAAMVQGLEEGT-E--EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQI 366 (467)
T ss_dssp -----TTTT---TCCHHHHHHHHHHHHHTT-C--HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTS
T ss_pred -----cccC---CccchHHHHHHHHHHHhh-h--hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhcccc
Confidence 0000 1111111 1111222111 1 23455556778889999987 5777766656667777731100 0
Q ss_pred hhhhhhHHHHHHHH-HhCCcEEEe-eccc--c----C------CeEE-EEecC-CCCHHHHHHHHHHHHHHHH
Q psy852 704 LIADQNNRKLLEDI-NASGRLHMV-PASQ--E----Q------NDEV-FELQE-RKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 704 ~~~d~ln~~L~~~L-~~~G~~~~s-~s~~--~----g------~~~l-~sv~~-~tT~edId~li~~L~ei~~ 760 (891)
...+.....+.+.| .+.|+.+.. +... . + ...+ +++.. .+|++||+++++.|+++..
T Consensus 367 ~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 439 (467)
T 1ax4_A 367 PGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE 439 (467)
T ss_dssp CGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred ccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 00012356788888 788987554 2210 0 1 2567 98875 4899999999999998764
No 191
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=98.92 E-value=4e-08 Score=108.68 Aligned_cols=84 Identities=20% Similarity=0.156 Sum_probs=71.0
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++...|.+...++...+.+++.+|. +|+++|++.+++... .+.+|++...+|.+|.+.|+++|+++|++
T Consensus 125 ~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~ 196 (384)
T 1bs0_A 125 RIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQVTQQ 196 (384)
T ss_dssp EEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHHHHHH
T ss_pred EEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHHHHHhcCC---CCeEEEEeCCCCCCCCccCHHHHHHHHHH
Confidence 4788888999999998888888888874 589999998875421 24677778888999999999999999999
Q ss_pred cCCceeeecccc
Q psy852 224 FDVWLHVDGAYA 235 (891)
Q Consensus 224 ~~~~lHvDaA~G 235 (891)
+|+++++|.+++
T Consensus 197 ~~~~li~De~~~ 208 (384)
T 1bs0_A 197 HNGWLMVDDAHG 208 (384)
T ss_dssp TTCEEEEECTTT
T ss_pred cCcEEEEECCcc
Confidence 999999999984
No 192
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=98.92 E-value=7.8e-08 Score=105.80 Aligned_cols=156 Identities=12% Similarity=0.034 Sum_probs=106.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
..|.+...+...+-+. ...+.. .. .+++..+.+++.+..|++.+. +.+ .+
T Consensus 37 ~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~-------------~~i--------------~~ 86 (377)
T 3fdb_A 37 TCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARP-------------EWI--------------FP 86 (377)
T ss_dssp CCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG-------------GGE--------------EE
T ss_pred CCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH-------------HHE--------------EE
Confidence 4566665555444321 112222 22 688899999999998876431 111 14
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHh
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQ 188 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~ 188 (891)
++||+...+..+..+ . . +.-.|++..-+|.+...++...+.+++.++.+++ +|+++|++.+++
T Consensus 87 t~g~~~a~~~~~~~~-~-~-------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~ 149 (377)
T 3fdb_A 87 IPDVVRGLYIAIDHF-T-P-------------AQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG--INLHDVEKGFQA 149 (377)
T ss_dssp ESCHHHHHHHHHHHH-S-C-------------TTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CCHHHHHHHHHT
T ss_pred eCChHHHHHHHHHHh-c-C-------------CCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CCHHHHHHHhcc
Confidence 567764433322222 1 1 1112677778899998888777889999999887 999999999986
Q ss_pred hhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCC
Q psy852 189 DETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 189 ~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
. +.+|+++..+|.+|.+-| +.+|+++|+++|+++++|.+|+++
T Consensus 150 ~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 195 (377)
T 3fdb_A 150 G------ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPL 195 (377)
T ss_dssp T------CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred C------CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchh
Confidence 4 246777777999999965 666777799999999999999653
No 193
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.91 E-value=2.4e-08 Score=112.95 Aligned_cols=145 Identities=12% Similarity=0.107 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCc
Q psy852 54 SCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPF 133 (891)
Q Consensus 54 ~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~ 133 (891)
...++++.+.+++.+..|+.... .++.+ .+++||+.. +...+...+.
T Consensus 87 g~~~l~~~la~~~~~~~~~~~~~-----------~~~~v--------------~~~~gg~~a-~~~~~~~l~~------- 133 (435)
T 3piu_A 87 GLPAFKKAMVDFMAEIRGNKVTF-----------DPNHL--------------VLTAGATSA-NETFIFCLAD------- 133 (435)
T ss_dssp CCHHHHHHHHHHHHHHTTTSSCC-----------CGGGE--------------EEEEHHHHH-HHHHHHHHCC-------
T ss_pred CcHHHHHHHHHHHHHhhCCCCCC-----------CHHHE--------------EEcCChHHH-HHHHHHHhcC-------
Confidence 34789999999999887743221 01111 145677644 3333222211
Q ss_pred cccccccCCeEEEecCCCChHHHHHHH-HcCCeEEEEecCCC--CcccHHHHHHHHHhhhhcCCcceEEEeecccCcccc
Q psy852 134 VDEGVLLSKLMAYCSKEAHSCVEKAAM-MAFVRLKILEPDDK--NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCS 210 (891)
Q Consensus 134 ~~~g~~~~~~~v~~S~~~H~Sv~kaa~-~~~~~v~~V~~d~~--g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Ga 210 (891)
+.-.|++....|.+...++. ..+.+++.++.+++ ..+|+++|++.+++....+..+.+|+++..+|.+|.
T Consensus 134 -------~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~ 206 (435)
T 3piu_A 134 -------PGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206 (435)
T ss_dssp -------TTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCC
T ss_pred -------CCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCC
Confidence 11237777788999988876 67889999998864 458999999999876555555677888888999999
Q ss_pred ccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 211 FDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 211 vDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+-| +++|+++|+++|+++++|.+|+++.
T Consensus 207 ~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~ 237 (435)
T 3piu_A 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTA 237 (435)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccc
Confidence 954 5888889999999999999996643
No 194
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=98.91 E-value=2.1e-08 Score=114.53 Aligned_cols=88 Identities=14% Similarity=0.131 Sum_probs=68.5
Q ss_pred EEEecC-CCChHHH-----------HHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeec----ccCc
Q psy852 144 MAYCSK-EAHSCVE-----------KAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTL----GTTS 207 (891)
Q Consensus 144 ~v~~S~-~~H~Sv~-----------kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~----Gtt~ 207 (891)
.|+++. ..|.... +.+...|.+++.|+.+++|.+|+++|++++++. ..+.+|+++. .++.
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~np 192 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKED----ESITLVHIQRSTGYGWRR 192 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSC
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCC
Confidence 366666 5665554 233345779999999999999999999999831 0134666666 7899
Q ss_pred cccccCHHHHHHHHHH--cCCceeeecccc
Q psy852 208 CCSFDNLAEIGPVAKE--FDVWLHVDGAYA 235 (891)
Q Consensus 208 ~GavDpl~~I~~i~~~--~~~~lHvDaA~G 235 (891)
+|.+.|+++|+++|++ +|+++|||.||+
T Consensus 193 tg~i~dl~~i~~la~~~~~g~~livD~a~~ 222 (427)
T 3i16_A 193 ALLIEDIKSIVDCVKNIRKDIICFVDNCYG 222 (427)
T ss_dssp CCCHHHHHHHHHHHHHHCTTSEEEEECTTT
T ss_pred cccHHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 9999999999999999 888888888884
No 195
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=98.91 E-value=2.2e-08 Score=115.88 Aligned_cols=274 Identities=10% Similarity=0.042 Sum_probs=154.4
Q ss_pred HHHHhhccCCc---cccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHH-----
Q psy852 451 LFEGKVRRDPR---FEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA----- 522 (891)
Q Consensus 451 ~l~~~L~~~~~---~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Ka----- 522 (891)
++++.+...+. ..|+ +++|+ ++|+.++.+. .+ +.-.|+++..+|.+....
T Consensus 98 ~~a~~~g~~~~~~~~~V~--~~sGs-~an~~~~~al----l~---------------pGD~Vl~~~~~~~~~~~~~~~~~ 155 (483)
T 1rv3_A 98 RALQAYGLDPQCWGVNVQ--PYSGS-PANFAVYTAL----VE---------------PHGRIMGLDLPDGGHLTHGFMTD 155 (483)
T ss_dssp HHHHHTTCCTTTEEEECC--CSSHH-HHHHHHHHHH----TC---------------TTCEEEEECGGGTCCGGGCCBCS
T ss_pred HHHHHhCCCcccCceEEE--ECCcH-HHHHHHHHHh----cC---------------CCCEEEEecCccCcCcchhhhhc
Confidence 55555554322 2244 55655 7777766543 11 122477777777666432
Q ss_pred ---HHHcC--ceEEEecCC-CCCCcCHHHHHHHHHhhhhcCCccEEEEecCCc-cc---------hhhh-----hc----
Q psy852 523 ---AMMAF--VRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGT-TS---------CYRK-----SQ---- 577 (891)
Q Consensus 523 ---a~l~g--v~v~~Vp~d-~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGT-T~---------c~~~-----ld---- 577 (891)
+.+.| +..+.+++| +++.+|+++|++++.+.. .. ++++..... .. |.++ +|
T Consensus 156 ~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~---tk-lIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~ 231 (483)
T 1rv3_A 156 KKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFH---PK-LIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHI 231 (483)
T ss_dssp SCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC---CS-EEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcC---Cc-EEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccch
Confidence 22333 455555556 679999999999998421 11 222222111 11 3331 12
Q ss_pred ------CC-----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-CCCccccCCCCCcccc-CCccccccccc-
Q psy852 578 ------GI-----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYR-HWGIPLSRRFR- 643 (891)
Q Consensus 578 ------Gi-----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~~~-~~ti~~SRr~~- 643 (891)
|. +.+|.+++++||++.+|.| |+++++++..-...... ...|-. ....+.. ..+.+++-...
T Consensus 232 ~g~~~~~~~~~p~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y~~---~~~~~~~~~~~~~g~~~~~~ 307 (483)
T 1rv3_A 232 SGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILYNL---ESLINSAVFPGLQGGPHNHA 307 (483)
T ss_dssp HHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBCCH---HHHHHHHHTTTTCCSCCHHH
T ss_pred hcccccCCCCCCCCCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhhHH---HHHhhhhcCCcccCCccHHH
Confidence 21 2689999999999999999 99999876210000000 000000 0000000 00011111111
Q ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCc
Q psy852 644 SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV-RLGLVCFRLRSENNLIADQNNRKLLEDINASGR 722 (891)
Q Consensus 644 aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~ 722 (891)
...+..+++.+...+++++.++..+++++|.+.|++. +++++.+. ....+.+.+.+. +.....+.+.|.+.|+
T Consensus 308 iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~-----g~~~~~~~~~L~~~gI 381 (483)
T 1rv3_A 308 IAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSK-----GTDGGRAEKVLEACSI 381 (483)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGG-----TCCHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCC-----CCCHHHHHHHHHhCCc
Confidence 2344556666666788999999999999999999987 89987643 223444555422 1134567777888897
Q ss_pred EEE----eecc-ccCCeEE-EEecCCCC----HHHHHHHHHHHHHHHH
Q psy852 723 LHM----VPAS-QEQNDEV-FELQERKR----KDDLAYKRSFFVRMLG 760 (891)
Q Consensus 723 ~~~----s~s~-~~g~~~l-~sv~~~tT----~edId~li~~L~ei~~ 760 (891)
... .+.. ..+...+ +++...+| ++|++++++.|++++.
T Consensus 382 ~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~ 429 (483)
T 1rv3_A 382 ACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIE 429 (483)
T ss_dssp ECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 744 2211 1133456 88775555 9999999999998864
No 196
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.91 E-value=2.2e-08 Score=114.13 Aligned_cols=87 Identities=16% Similarity=0.134 Sum_probs=63.6
Q ss_pred EEecCCCChHH-HHHHHHcCCeEEEEecC----------CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc-ccc-
Q psy852 145 AYCSKEAHSCV-EKAAMMAFVRLKILEPD----------DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC-CSF- 211 (891)
Q Consensus 145 v~~S~~~H~Sv-~kaa~~~~~~v~~V~~d----------~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~-Gav- 211 (891)
|+++ ..||.. ..++...+.+++.++.+ .+|.+|+++|+++|++.. ...+.+|+++..+|.+ |.+
T Consensus 125 viv~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~ 201 (467)
T 1ax4_A 125 VFIS-NFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPV 201 (467)
T ss_dssp EEEE-SSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCC
T ss_pred EEEe-ccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCC
Confidence 4455 677555 44456667777766532 157899999999998631 0124577778888888 665
Q ss_pred --cCHHHHHHHHHHcCCceeeeccc
Q psy852 212 --DNLAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 212 --Dpl~~I~~i~~~~~~~lHvDaA~ 234 (891)
+++++|+++|++||++||+|+++
T Consensus 202 ~~~~l~~i~~la~~~gi~li~De~~ 226 (467)
T 1ax4_A 202 SMSNLKEVYEIAKQHGIFVVMDSAR 226 (467)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred ChhHHHHHHHHHHHcCCEEEEEchh
Confidence 67889999999999999999986
No 197
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.90 E-value=3e-08 Score=110.42 Aligned_cols=83 Identities=13% Similarity=0.173 Sum_probs=68.3
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.++..+. ...+.+++.++.+ |+++|++.+++. +.+|+++..+|.+|.+.|+++|++
T Consensus 93 ~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~ 161 (386)
T 1cs1_A 93 LLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG-----DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICH 161 (386)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT-----CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHH
T ss_pred EEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC-----CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHH
Confidence 4778888999876654 2356788888874 899999999753 357778899999999999999999
Q ss_pred HHHHcCCceeeeccccCC
Q psy852 220 VAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG~ 237 (891)
+|+++|+++++|.+++++
T Consensus 162 l~~~~~~~li~De~~~~~ 179 (386)
T 1cs1_A 162 LAREVGAVSVVDNTFLSP 179 (386)
T ss_dssp HHHHTTCEEEEECTTTCT
T ss_pred HHHHcCCEEEEECCCccc
Confidence 999999999999998543
No 198
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=98.90 E-value=3.1e-08 Score=110.45 Aligned_cols=248 Identities=10% Similarity=0.018 Sum_probs=157.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.+++| +|
T Consensus 93 ~v~--~~~g~~~al~~~~~~~~~-------------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d 150 (397)
T 2zyj_A 93 EVL--ITTGSQQALDLVGKVFLD-------------------EGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-PD 150 (397)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-EC
T ss_pred hEE--EeccHHHHHHHHHHHhCC-------------------CCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCC-CC
Confidence 555 788999998887766411 11247777788888888888888999999987766 99
Q ss_pred HHHHHHHHHhhhhcCCccEEEE----ecCCccc-----------hhhh-----hc---------CCC-------Ccc---
Q psy852 543 GATLRQVMQQDETMGYIPFFVS----TTLGTTS-----------CYRK-----SQ---------GIE-------YAD--- 583 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vv----ataGTT~-----------c~~~-----ld---------Gi~-------~aD--- 583 (891)
+++|+++|++. +...++++ +..|+.. |.++ +| |-. ..|
T Consensus 151 ~~~l~~~l~~~---~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 227 (397)
T 2zyj_A 151 LDALEEVLKRE---RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGY 227 (397)
T ss_dssp HHHHHHHHHHC---CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTC
T ss_pred HHHHHHHHhhc---CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCC
Confidence 99999999862 11222232 2345543 3331 11 110 012
Q ss_pred ---EEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH---
Q psy852 584 ---SFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL--- 656 (891)
Q Consensus 584 ---SIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~--- 656 (891)
-+..++||+++ | ..+|+++.+++ +.+.+.....+ ..++. ..+.++++...+..
T Consensus 228 ~~~i~~~s~sK~~~-~G~r~G~~~~~~~--~~~~l~~~~~~-----------~~~~~------~~~~~~a~~~~l~~~~~ 287 (397)
T 2zyj_A 228 PGVIYLGSFSKVLS-PGLRVAFAVAHPE--ALQKLVQAKQG-----------ADLHT------PMLNQMLVHELLKEGFS 287 (397)
T ss_dssp CCEEEEEESTTTTC-GGGCCEEEECCHH--HHHHHHHHHHH-----------HHSSC------CHHHHHHHHHHHTTTHH
T ss_pred CeEEEEeccccccc-ccceeEEEecCHH--HHHHHHHHHHh-----------hcCCC------CHHHHHHHHHHHHhCCH
Confidence 55778999999 6 67899988633 22222110000 00000 12333333333322
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcc-CC-CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecccc---
Q psy852 657 SGLQKYIRRHCELAKLFEGKVRR-DP-RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQE--- 731 (891)
Q Consensus 657 ~G~~~~i~~~~~lA~~L~~~L~~-~~-~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~--- 731 (891)
+.+++..++..++++++.+.|++ .+ ++++..+...+.+++++... ....++.+.|.++|+.+..+....
T Consensus 288 ~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~------~~~~~~~~~l~~~gi~v~~g~~f~~~~ 361 (397)
T 2zyj_A 288 ERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKG------LSAEGLFRRALEENVAFVPGGPFFANG 361 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTT------CCHHHHHHHHHHTTEEEEESGGGCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCC------CCHHHHHHHHHHCCCEEechHHhcCCC
Confidence 34666677778889999999987 57 58887655566788888531 135678899988998865544331
Q ss_pred -CCeEE-EEecCCCCHHHHHHHHHHHHHHHHHH
Q psy852 732 -QNDEV-FELQERKRKDDLAYKRSFFVRMLGLV 762 (891)
Q Consensus 732 -g~~~l-~sv~~~tT~edId~li~~L~ei~~~~ 762 (891)
+...+ ++++.. ++++|+++++.|+++++.+
T Consensus 362 ~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~ 393 (397)
T 2zyj_A 362 GGENTLRLSYATL-DREGIAEGVRRLGRALKGL 393 (397)
T ss_dssp CCTTEEEEECSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHH
Confidence 34567 988775 8999999999999887533
No 199
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.90 E-value=5.5e-08 Score=109.63 Aligned_cols=143 Identities=12% Similarity=0.135 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCcc
Q psy852 55 CTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFV 134 (891)
Q Consensus 55 ~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~ 134 (891)
..++++.+.+++.+.+|++... .|+.+ .+++||+ +.+..++.....
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~-----------~~~~i--------------~~~~G~~-~ai~~~~~~~~~-------- 130 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRF-----------DPERV--------------VMAGGAT-GANETIIFCLAD-------- 130 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCC-----------CTTSC--------------EEEEHHH-HHHHHHHHHHCC--------
T ss_pred cHHHHHHHHHHHHHhcCCCCCC-----------ChhhE--------------EEccChH-HHHHHHHHHhCC--------
Confidence 5789999999999998865221 01111 1345554 333222222211
Q ss_pred ccccccCCeEEEecCCCChHHHHHH-HHcCCeEEEEecCC--CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc
Q psy852 135 DEGVLLSKLMAYCSKEAHSCVEKAA-MMAFVRLKILEPDD--KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF 211 (891)
Q Consensus 135 ~~g~~~~~~~v~~S~~~H~Sv~kaa-~~~~~~v~~V~~d~--~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav 211 (891)
+.-.|+++.-+|.+....+ ...|.+++.++.+. ++.+|+++|++++++....+..+.+|+++..+|.+|.+
T Consensus 131 ------~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~ 204 (428)
T 1iay_A 131 ------PGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTT 204 (428)
T ss_dssp ------TTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC
T ss_pred ------CCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCc
Confidence 1123777788898887755 35678999999874 34799999999998754444445667777889999999
Q ss_pred cC---HHHHHHHHHHcCCceeeeccccCC
Q psy852 212 DN---LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 212 Dp---l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
-| +++|+++|+++|+++++|.||+++
T Consensus 205 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 233 (428)
T 1iay_A 205 LDKDTLKSVLSFTNQHNIHLVCDEIYAAT 233 (428)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEECTTGGG
T ss_pred CCHHHHHHHHHHHHHCCeEEEEecccccc
Confidence 99 999999999999999999999764
No 200
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=98.90 E-value=4e-09 Score=114.99 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=68.8
Q ss_pred EEEecCCCChHHHH---HHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc-ccccC---HHH
Q psy852 144 MAYCSKEAHSCVEK---AAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC-CSFDN---LAE 216 (891)
Q Consensus 144 ~v~~S~~~H~Sv~k---aa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~-GavDp---l~~ 216 (891)
.|+++..+|++... .+...+.+++.| .+++|.+|+++|++++++....+..+.+|+++..+|.+ |.+-| +++
T Consensus 79 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~ 157 (347)
T 1jg8_A 79 EVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKE 157 (347)
T ss_dssp EEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred EEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHH
Confidence 47778889988754 345677788888 66788899999999886421011135678888889998 99866 468
Q ss_pred HHHHHHHcCCceeeeccc
Q psy852 217 IGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 217 I~~i~~~~~~~lHvDaA~ 234 (891)
|+++|+++|++|++|+|+
T Consensus 158 i~~~a~~~~~~li~D~a~ 175 (347)
T 1jg8_A 158 ICTIAKEHGINVHIDGAR 175 (347)
T ss_dssp HHHHHHHHTCEEEEEETT
T ss_pred HHHHHHHCCCEEEeehhh
Confidence 889999999999999987
No 201
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=98.89 E-value=2.1e-08 Score=113.89 Aligned_cols=80 Identities=9% Similarity=0.013 Sum_probs=67.7
Q ss_pred EEEecCCCChHHHHHHHH----cCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMM----AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~----~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.+....+.. .+.+++.|+.+ |+++|++++++. +.+|++...+|.+|.+.|+++|++
T Consensus 122 ~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~ai~~~------t~~v~le~p~NptG~~~~l~~i~~ 190 (414)
T 3ndn_A 122 RLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-----DLSQWERALSVP------TQAVFFETPSNPMQSLVDIAAVTE 190 (414)
T ss_dssp EEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----CHHHHHHHTSSC------CSEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-----CHHHHHHhcCCC------CeEEEEECCCCCCCccccHHHHHH
Confidence 477888899988776632 67799999876 899999988654 347777889999999999999999
Q ss_pred HHHHcCCceeeeccc
Q psy852 220 VAKEFDVWLHVDGAY 234 (891)
Q Consensus 220 i~~~~~~~lHvDaA~ 234 (891)
+|+++|+++++|.+|
T Consensus 191 la~~~g~~livDe~~ 205 (414)
T 3ndn_A 191 LAHAAGAKVVLDNVF 205 (414)
T ss_dssp HHHHTTCEEEEECTT
T ss_pred HHHHcCCEEEEECCC
Confidence 999999999999988
No 202
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=98.89 E-value=5.4e-09 Score=119.76 Aligned_cols=236 Identities=12% Similarity=0.051 Sum_probs=150.8
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC--CCC----CCc
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP--DDK----NSL 541 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~--d~~----G~m 541 (891)
+++|+|++|..++.++.. +...|+++..+|.++..++.+.|.+++.++. +++ +.+
T Consensus 77 ~~~G~t~a~~~~~~a~~~-------------------~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~~~~ 137 (446)
T 2x3l_A 77 LVNGTTSGILSVIQSFSQ-------------------KKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNHYNKV 137 (446)
T ss_dssp ESSHHHHHHHHHHHTTTT-------------------SSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSSEEEE
T ss_pred EeCCHHHHHHHHHHHhcC-------------------CCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCcCCCC
Confidence 678889999988877511 1235889999999999999988999999988 765 789
Q ss_pred CHHHHHHHHHhhhhcCCccEEEEe--cCCccc--------hhhh-----hcCC----------------CCccEEEEcCc
Q psy852 542 RGATLRQVMQQDETMGYIPFFVST--TLGTTS--------CYRK-----SQGI----------------EYADSFNVNVN 590 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vva--taGTT~--------c~~~-----ldGi----------------~~aDSIs~d~H 590 (891)
|+++| +..+ ...++++. ..|+.. |+++ +|.+ ..+|.++.|+|
T Consensus 138 d~~~l---~~~~----~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~~S~~ 210 (446)
T 2x3l_A 138 NLSRL---NNDG----HKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVVQSFH 210 (446)
T ss_dssp EC--------------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEEECHH
T ss_pred CHHHH---cCCC----ceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEEECCc
Confidence 99988 3221 12223332 134443 4331 2211 13799999999
Q ss_pred ccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccc-cchHHHHHHHHHHHhhHHHHHHHHHHH
Q psy852 591 KWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRF-RSLKLWFVIRTYGLSGLQKYIRRHCEL 669 (891)
Q Consensus 591 K~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~-~aL~lW~~L~~lG~~G~~~~i~~~~~l 669 (891)
|++++|.++|+++++++..-...+........ ..+... ....++.+++.+...|.++..++..++
T Consensus 211 K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~~--------------~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l 276 (446)
T 2x3l_A 211 KTLPALTMGSVLYIHKNAPYRENIIEYLSYFQ--------------TSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQL 276 (446)
T ss_dssp HHSSSCTTCEEEEEETTCTTHHHHHHHHHHHS--------------CSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred cccccccccEEEEEcCCcCCHHHHHHHHHHHc--------------CCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 99999999999999876311111110000000 011111 123455566667666766678888888
Q ss_pred HHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHH
Q psy852 670 AKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDL 748 (891)
Q Consensus 670 A~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edI 748 (891)
++++.+. +++++.+.....++|.+.+. ...++.+.|.++|+... ..+...+ ++++..+|++|+
T Consensus 277 ~~~l~~~-----g~~~~~~~~~~~l~i~~~~~-------~~~~l~~~L~~~GI~v~----~~g~~~iRi~~~~~~t~e~i 340 (446)
T 2x3l_A 277 IECLENK-----GFEMLQVDDPLKLLIKYEGF-------TGHDIQNWFMNAHIYLE----LADDYQALAILPLWHHDDTY 340 (446)
T ss_dssp HHHHHHH-----TCEEEECSSTTEEEEECTTS-------CHHHHHHHHHHTTEEES----EECSSCEEEECCCCCTTCCC
T ss_pred HHHHHHc-----CCEECcCCCCeEEEEEeCCc-------CHHHHHHHHHHCCCEEE----ecCCCEEEEEeecCCCHHHH
Confidence 8888887 67777544334677887532 34578888888887742 1133456 999888899999
Q ss_pred HHHHHHHHHHHH
Q psy852 749 AYKRSFFVRMLG 760 (891)
Q Consensus 749 d~li~~L~ei~~ 760 (891)
+++++|+++..
T Consensus 341 -~l~~aL~~~~~ 351 (446)
T 2x3l_A 341 -LFDSLLRKIED 351 (446)
T ss_dssp -CHHHHHHHHHT
T ss_pred -HHHHHHHHHHH
Confidence 99999998763
No 203
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=98.89 E-value=4.6e-08 Score=111.01 Aligned_cols=286 Identities=9% Similarity=0.070 Sum_probs=159.3
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+... +++ ++++|++++..++.+.+.....+. ...+.-.|+++..+|.+...++...
T Consensus 66 ~l~~~la~~~g~~---~~i--~~~sGt~a~~~al~~l~~~~~~~~----------~~~~gd~Vi~~~~~~~~~~~~~~~~ 130 (437)
T 3bb8_A 66 AFEKKLGEYLGVP---YVL--TTTSGSSANLLALTALTSPKLGVR----------ALKPGDEVITVAAGFPTTVNPTIQN 130 (437)
T ss_dssp HHHHHHHHHHTCS---EEE--EESCHHHHHHHHHHHTTCGGGGGG----------SCCTTCEEEECSSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCC---cEE--EeCCHHHHHHHHHHHhhhcccccc----------cCCCcCEEEECCCCcHHHHHHHHHc
Confidence 3444555555542 334 567888999988877631111000 0112235888999999999999888
Q ss_pred CceEEEecCCC-CCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcCC-------------
Q psy852 527 FVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQGI------------- 579 (891)
Q Consensus 527 gv~v~~Vp~d~-~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldGi------------- 579 (891)
|.+++.+|+++ ++.+|+++|+++|++.+ ..++++...|... |+++ +|++
T Consensus 131 g~~~~~v~~~~~~~~~d~~~l~~~i~~~~----~~v~~~~~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~ 206 (437)
T 3bb8_A 131 GLIPVFVDVDIPTYNVNASLIEAAVSDKT----KAIMIAHTLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAG 206 (437)
T ss_dssp TCEEEECCEETTTTEECGGGHHHHCCTTE----EEEEEECGGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETT
T ss_pred CCEEEEEeccCccCCcCHHHHHHhcCCCC----eEEEEeCCCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecc
Confidence 99999999876 79999999999986532 1233333566654 4431 2221
Q ss_pred CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCcccc-----CCC------------CCc-cc-cCCc--ccc
Q psy852 580 EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQH-----GHE------------GAI-DY-RHWG--IPL 638 (891)
Q Consensus 580 ~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~-----~~e------------~~~-~~-~~~t--i~~ 638 (891)
..+|.+.++.+|.-..|.+.|.+++.++..+.+.+.....|-.. +.+ ..+ .+ ..++ ..+
T Consensus 207 ~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 286 (437)
T 3bb8_A 207 TFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLG 286 (437)
T ss_dssp SSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCC
T ss_pred cccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccC
Confidence 12677666643222224455556666554443321110001000 000 000 00 0000 000
Q ss_pred cc-cccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC---c-ee----EEEEEecCCcchhhhhh
Q psy852 639 SR-RFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV---R-LG----LVCFRLRSENNLIADQN 709 (891)
Q Consensus 639 SR-r~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~---~-~~----iV~Fr~~~~~~~~~d~l 709 (891)
.+ +...+.....+.. .+.+.+.+++..++++++.+.|++++++.++... . .+ ++.|.... +..
T Consensus 287 ~~~~~~~~~aa~~l~~--l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 358 (437)
T 3bb8_A 287 YNLKITDMQAACGLAQ--LERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDS------GVS 358 (437)
T ss_dssp CBCCCBHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGG------SSC
T ss_pred cccCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcC------cCc
Confidence 00 1122332222222 3445677778899999999999998887765321 1 12 33344320 113
Q ss_pred HHHHHHHHHhCCcEEEeecc--c------c--C--------------CeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 710 NRKLLEDINASGRLHMVPAS--Q------E--Q--------------NDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 710 n~~L~~~L~~~G~~~~s~s~--~------~--g--------------~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
...+.+.|.++|+....... + . + ...+ +++++.+|++|||+++++|++++
T Consensus 359 ~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~ 433 (437)
T 3bb8_A 359 RIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFF 433 (437)
T ss_dssp HHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 56789999999987443321 1 0 0 1246 88999999999999999998765
No 204
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=98.89 E-value=6.6e-08 Score=108.44 Aligned_cols=139 Identities=10% Similarity=0.032 Sum_probs=96.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCC
Q psy852 53 PSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHP 132 (891)
Q Consensus 53 p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~ 132 (891)
+...+++..+.+++.+..|.+.... +.+ .+++||+......+..+ . .
T Consensus 75 ~g~~~l~~~ia~~~~~~~g~~~~~~------------~~v--------------~~t~g~~~a~~~~~~~~-~-~----- 121 (412)
T 2x5d_A 75 RGIPRLRRAISHWYRDRYDVQIDPE------------SEA--------------IVTIGSKEGLAHLMLAT-L-D----- 121 (412)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTT------------TSE--------------EEESCHHHHHHHHHHHH-C-C-----
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCC------------cCE--------------EEcCChHHHHHHHHHHh-C-C-----
Confidence 4467888999999988888742200 001 13567764332222222 1 1
Q ss_pred ccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCC-C-cccHHHHHHHHHhhhhcCCcceEEEeecccCcccc
Q psy852 133 FVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-N-SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCS 210 (891)
Q Consensus 133 ~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~-g-~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Ga 210 (891)
+...|++..-+|.+....+...+.+++.++.+++ | .+|+++|++++++. +.+|+++..+|.+|.
T Consensus 122 --------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~ 187 (412)
T 2x5d_A 122 --------HGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQ 187 (412)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCC
T ss_pred --------CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCC
Confidence 1124777788999999888777789999999875 3 48999999887632 335556777899999
Q ss_pred ccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 211 FDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 211 vDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+-| +++|+++|+++|+++++|.+|+++.
T Consensus 188 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 218 (412)
T 2x5d_A 188 CVELDFFERVVALAKQYDVMVVHDLAYADIV 218 (412)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccccc
Confidence 866 6889999999999999999996543
No 205
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=98.89 E-value=2.4e-08 Score=112.44 Aligned_cols=137 Identities=9% Similarity=0.026 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCC-CccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCC
Q psy852 54 SCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPN-DIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHP 132 (891)
Q Consensus 54 ~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~-~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~ 132 (891)
...++++.+.+++.+.+|.+... + .+ .+++||+.. +...+.....
T Consensus 78 g~~~l~~~la~~l~~~~g~~~~~-------------~~~v--------------~~~~g~~~a-~~~~~~~~~~------ 123 (429)
T 1yiz_A 78 GHPRLVQALSKLYSQLVDRTINP-------------MTEV--------------LVTVGAYEA-LYATIQGHVD------ 123 (429)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCT-------------TTSE--------------EEESHHHHH-HHHHHHHHCC------
T ss_pred CcHHHHHHHHHHHHHHhCCCCCC-------------cCCE--------------EEecChHHH-HHHHHHHhcC------
Confidence 35789999999999988865321 0 01 135676543 3222222211
Q ss_pred ccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC----------CCcccHHHHHHHHHhhhhcCCcceEEEee
Q psy852 133 FVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD----------KNSLRGATLRQVMQQDETMGYIPFFVSTT 202 (891)
Q Consensus 133 ~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~----------~g~id~~~L~~~l~~~~~~g~~p~~V~~t 202 (891)
+...|++..-+|++...++...|.+++.++.+. ++.+|+++|++.+++. +.+|+++
T Consensus 124 --------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~ 189 (429)
T 1yiz_A 124 --------EGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMIIIN 189 (429)
T ss_dssp --------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEEEEE
T ss_pred --------CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEEEEC
Confidence 112367777788888888877788999999876 3579999999988643 3466667
Q ss_pred cccCccccccC---HHHHHHHHHHcCCceeeeccccCCc
Q psy852 203 LGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 203 ~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
..+|.+|.+-| +++|+++|+++|+++++|.+|+++.
T Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (429)
T 1yiz_A 190 TPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMV 228 (429)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccc
Confidence 88999999975 9999999999999999999997644
No 206
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=98.88 E-value=1.1e-07 Score=107.88 Aligned_cols=84 Identities=12% Similarity=0.135 Sum_probs=70.5
Q ss_pred eEEEecCCCChHHHHHHHHcCCeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHH
Q psy852 143 LMAYCSKEAHSCVEKAAMMAFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVA 221 (891)
Q Consensus 143 ~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~ 221 (891)
-.|+++..+|.+...++...|.+++.+++++ ++.+|+++|++++++. +.+|+++. .+|...|+++|.++|
T Consensus 111 d~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~ 181 (437)
T 3bb8_A 111 DEVITVAAGFPTTVNPTIQNGLIPVFVDVDIPTYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRRVA 181 (437)
T ss_dssp CEEEECSSSCHHHHHHHHHTTCEEEECCEETTTTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEeccCccCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHHHH
Confidence 3588889999999999987888999999986 7999999999988653 33555543 467889999999999
Q ss_pred HHcCCceeeecccc
Q psy852 222 KEFDVWLHVDGAYA 235 (891)
Q Consensus 222 ~~~~~~lHvDaA~G 235 (891)
+++|+++|+|+|++
T Consensus 182 ~~~~~~li~D~a~~ 195 (437)
T 3bb8_A 182 DKYNLWLIEDCCDA 195 (437)
T ss_dssp HHHTCEEEEECTTC
T ss_pred HHcCCEEEEECccc
Confidence 99999999999984
No 207
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=98.88 E-value=6.2e-08 Score=105.83 Aligned_cols=254 Identities=8% Similarity=-0.029 Sum_probs=161.8
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+...+. +++ +++|+++++..++.+... +.-.|+++...|.+...++...
T Consensus 55 ~l~~~la~~~~~~~~-~i~--~~~g~~~a~~~~~~~l~~-------------------~gd~vl~~~~~~~~~~~~~~~~ 112 (354)
T 3ly1_A 55 MLGNKLAAHHQVEAP-SIL--LTAGSSEGIRAAIEAYAS-------------------LEAQLVIPELTYGDGEHFAKIA 112 (354)
T ss_dssp HHHHHHHHHTTSCGG-GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEESSSCTHHHHHHHHT
T ss_pred HHHHHHHHHhCCChH-HEE--EeCChHHHHHHHHHHHhC-------------------CCCeEEECCCCchHHHHHHHHc
Confidence 444555566653333 566 678999999888765411 1124778888899999999889
Q ss_pred CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hh--hh-----hcCC---------
Q psy852 527 FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CY--RK-----SQGI--------- 579 (891)
Q Consensus 527 gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~--~~-----ldGi--------- 579 (891)
|.+++.+|.++++.+|+++|+++|++.. +...++++. ..|+.. |. ++ +|.+
T Consensus 113 g~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~ 190 (354)
T 3ly1_A 113 GMKVTKVKMLDNWAFDIEGLKAAVAAYS--GPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPR 190 (354)
T ss_dssp TCEEEEECCCTTSCCCHHHHHHHHHTCS--SCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTT
T ss_pred CCEEEEecCCCCCCCCHHHHHHHhccCC--CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccc
Confidence 9999999999899999999999998410 112233322 234443 11 11 1211
Q ss_pred -----------CCccEEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHH
Q psy852 580 -----------EYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKL 647 (891)
Q Consensus 580 -----------~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~l 647 (891)
...+-+..++||+++ ....+|+++..+ . +.+.+.....+ ++ ...+.+
T Consensus 191 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~-~~~~~~~~~~~-------------~~------~~~~~~ 249 (354)
T 3ly1_A 191 FRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP-T-VIALMGRYVAG-------------EK------INFSGV 249 (354)
T ss_dssp CCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH-H-HHHHHGGGTTC-------------SC------CCHHHH
T ss_pred cCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH-H-HHHHHHHhcCC-------------CC------CCHHHH
Confidence 023477789999997 556788888743 2 22222110000 11 112233
Q ss_pred HHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe
Q psy852 648 WFVIRTYG-LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV 726 (891)
Q Consensus 648 W~~L~~lG-~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s 726 (891)
++....+. .+.+.+..++..++++++.+.|++. ++++. ++..+.+++++.. ....+.+.|.+.|+.+.
T Consensus 250 ~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~--------~~~~~~~~l~~~gi~v~- 318 (354)
T 3ly1_A 250 DAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQLVV--------PLKDYQTHMADAGVLIG- 318 (354)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECSS--------CHHHHHHHHHHTTEECC-
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEECCC--------CHHHHHHHHHHCCEEEe-
Confidence 33333332 2557777888889999999999886 66665 4455677888753 35678888888998754
Q ss_pred eccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 727 PASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 727 ~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+........+ ++++ +++|+++++++|+++.
T Consensus 319 g~~~~~~~~iRis~~---~~~~i~~~~~~l~~~l 349 (354)
T 3ly1_A 319 RAFPPADNWCRISLG---TPQEMQWVADTMREFR 349 (354)
T ss_dssp CCCTTCTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCEEEEEcC---CHHHHHHHHHHHHHHH
Confidence 3333345566 8865 7999999999999876
No 208
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=98.87 E-value=7.1e-09 Score=114.62 Aligned_cols=267 Identities=8% Similarity=0.033 Sum_probs=159.8
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+... +++ +++|||+++..++.+++. .+.-.|+++...|.+...++...
T Consensus 39 ~l~~~la~~~~~~---~~~--~~~sGt~al~~al~~~~~------------------~~gd~Vi~~~~~~~~~~~~~~~~ 95 (367)
T 3nyt_A 39 ELEDRLADFVGAK---YCI--SCANGTDALQIVQMALGV------------------GPGDEVITPGFTYVATAETVALL 95 (367)
T ss_dssp HHHHHHHHHHTCS---EEE--EESCHHHHHHHHHHHTTC------------------CTTCEEEEESSSCTHHHHHHHHT
T ss_pred HHHHHHHHHhCCC---cEE--EeCCHHHHHHHHHHHhCC------------------CCcCEEEECCCccHHHHHHHHHc
Confidence 3444555555542 344 678999999988877531 12235888999999999999989
Q ss_pred CceEEEecCCCC-CCcCHHHHHHHHHhhhhcCCccEEEEecCCccc--------hhhh-----hcCC-------------
Q psy852 527 FVRLKILEPDDK-NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS--------CYRK-----SQGI------------- 579 (891)
Q Consensus 527 gv~v~~Vp~d~~-G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~--------c~~~-----ldGi------------- 579 (891)
|.+++.+|++++ +.+|+++|+++|+++++ .+++++..|+.. |.++ +|.+
T Consensus 96 G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~----~v~~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~ 171 (367)
T 3nyt_A 96 GAKPVYVDIDPRTYNLDPQLLEAAITPRTK----AIIPVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSC 171 (367)
T ss_dssp TCEEEEECBCTTTCSBCGGGTGGGCCTTEE----EECCBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETT
T ss_pred CCEEEEEecCCccCCcCHHHHHHhcCcCCc----EEEeeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeecc
Confidence 999999999876 89999999999865322 233445566554 4331 2221
Q ss_pred CCccEEEEc--CcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHh
Q psy852 580 EYADSFNVN--VNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLS 657 (891)
Q Consensus 580 ~~aDSIs~d--~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~ 657 (891)
...|.++++ +||+++.+-..|+++.+++......-........ ..+... .+...-+...+..+..+. ..+
T Consensus 172 ~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~----~~~~~~--~~g~~~~~~~~~aa~~~~--~l~ 243 (367)
T 3nyt_A 172 NLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQD----RRYHHI--RVGVNSRLDTLQAAILLP--KLE 243 (367)
T ss_dssp SSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEE----ETTEEC--SCCCBCCCCHHHHHHHHH--HHH
T ss_pred CCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCC----cCceee--ccCcCCCccHHHHHHHHH--HHH
Confidence 111666766 6999986444666666555432221111100000 000000 011111233344444433 345
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc-----eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc---
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR-----LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS--- 729 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~-----~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~--- 729 (891)
.+++..++..++++++.+.|++.+ +++...+. ..++.+++. ..+.+.+.|.++|+.......
T Consensus 244 ~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~GI~~~~~~~~~~ 313 (367)
T 3nyt_A 244 IFEEEIALRQKVAAEYDLSLKQVG-IGTPFIEVNNISVYAQYTVRMD---------NRESVQASLKAAGVPTAVHYPIPL 313 (367)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTEECCCSSEEEECS---------SHHHHHHHHHHHTCCCBCSCSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC-eeccCCCCCCceeeEEEEEEeC---------CHHHHHHHHHHCCCceeccCCCcc
Confidence 667888888999999999999873 55432221 123344432 245788889888986332210
Q ss_pred -----cc------------CCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 730 -----QE------------QNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 730 -----~~------------g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
.. ....+ +++++.+|++|||++++.|++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 314 NKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp GGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred ccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 00 12356 7789999999999999998753
No 209
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=98.87 E-value=1.6e-07 Score=104.44 Aligned_cols=259 Identities=9% Similarity=0.026 Sum_probs=158.6
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+.. + +.+ +.++|++++..++.+... +.-.|+++...|.+...++...
T Consensus 94 ~l~~~la~~~g~-~--~~i--~~~sGs~a~~~~~~~~~~-------------------~gd~v~~~~~~~~~~~~~~~~~ 149 (401)
T 1fc4_A 94 ELEQKLAAFLGM-E--DAI--LYSSCFDANGGLFETLLG-------------------AEDAIISDALNHASIIDGVRLC 149 (401)
T ss_dssp HHHHHHHHHHTC-S--EEE--EESCHHHHHHTTHHHHCC-------------------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHhCC-C--cEE--EeCChHHHHHHHHHHHcC-------------------CCCEEEEcchhHHHHHHHHHHc
Confidence 344455555543 3 222 345668888877665310 1225788888999998888888
Q ss_pred CceEEEecCCCCCCcCHHHHHHHHHhhhhcC--CccEEEE---ecCCccc--------hhhh--------------h--c
Q psy852 527 FVRLKILEPDDKNSLRGATLRQVMQQDETMG--YIPFFVS---TTLGTTS--------CYRK--------------S--Q 577 (891)
Q Consensus 527 gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g--~ip~~Vv---ataGTT~--------c~~~--------------l--d 577 (891)
|.+++.+|. +|+++|+++|++....+ ...+++. +..|+.. |.++ . +
T Consensus 150 g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~ 224 (401)
T 1fc4_A 150 KAKRYRYAN-----NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGEN 224 (401)
T ss_dssp CSEEEEECT-----TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTT
T ss_pred CCceEEECC-----CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCC
Confidence 889888873 58999999998643221 1122222 2245543 3321 1 0
Q ss_pred --------CC-CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHH
Q psy852 578 --------GI-EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLW 648 (891)
Q Consensus 578 --------Gi-~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW 648 (891)
++ ..+|.+..++||+++++.| |+++.++ +.+.........|.. + . ....+.++
T Consensus 225 g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~~-~~~~~l~~~~~~~~~------------~--~--~~~~~~~~ 286 (401)
T 1fc4_A 225 GRGSHEYCDVMGRVDIITGTLGKALGGASG-GYTAARK-EVVEWLRQRSRPYLF------------S--N--SLAPAIVA 286 (401)
T ss_dssp SCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEECH-HHHHHHHHHCHHHHH------------S--C--CCCHHHHH
T ss_pred CCccHHHcCCCcCCcEEEecchhhccCCCC-EEEEcCH-HHHHHHHHhCcCcee------------C--C--CCCHHHHH
Confidence 11 2358999999999966666 8888753 322221111111100 0 0 11122333
Q ss_pred HHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEee
Q psy852 649 FVIRTYGL-SGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVP 727 (891)
Q Consensus 649 ~~L~~lG~-~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~ 727 (891)
..+..+.. ....+..++..++++++.+.|++. ++++. +...++++|++.+ .....++.+.|.++|+.+..+
T Consensus 287 a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~------~~~~~~l~~~l~~~gi~v~~~ 358 (401)
T 1fc4_A 287 ASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD------AVVAQKFARELQKEGIYVTGF 358 (401)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC------HHHHHHHHHHHHHTTEECCEE
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCC------hHHHHHHHHHHHHCCcEEeee
Confidence 33333322 114677788889999999999887 67766 4567788888853 234567888998899874433
Q ss_pred ccc---cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 728 ASQ---EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 728 s~~---~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
... .+...+ ++++..+|++|++++++.|++++.
T Consensus 359 ~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 395 (401)
T 1fc4_A 359 FYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK 395 (401)
T ss_dssp CTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 321 134567 999988999999999999998763
No 210
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=98.86 E-value=6e-08 Score=107.12 Aligned_cols=261 Identities=10% Similarity=0.037 Sum_probs=162.5
Q ss_pred HHHHHHHHhhc--cCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 447 ELAKLFEGKVR--RDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~--~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
++++++.+.+. ..+. +++ +++|+++++..++.+... +.-.|++...+|.+...++.
T Consensus 75 ~l~~~l~~~~g~~~~~~-~v~--~~~g~~~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~ 132 (391)
T 4dq6_A 75 SIVNWLYRRHNWKIKSE-WLI--YSPGVIPAISLLINELTK-------------------ANDKIMIQEPVYSPFNSVVK 132 (391)
T ss_dssp HHHHHHHHHHCCCCCGG-GEE--EESCHHHHHHHHHHHHSC-------------------TTCEEEECSSCCTHHHHHHH
T ss_pred HHHHHHHHHhCCCCcHH-HeE--EcCChHHHHHHHHHHhCC-------------------CCCEEEEcCCCCHHHHHHHH
Confidence 34455555544 2222 556 788999999888776421 12257888899999999998
Q ss_pred HcCceEEEecCC--CC--CCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hcCC--
Q psy852 525 MAFVRLKILEPD--DK--NSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQGI-- 579 (891)
Q Consensus 525 l~gv~v~~Vp~d--~~--G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ldGi-- 579 (891)
..|.+++.+|.+ ++ +.+|+++|+++|++ ++ .++++. ..|++. |.++ +|.+
T Consensus 133 ~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~----~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 207 (391)
T 4dq6_A 133 NNNRELIISPLQKLENGNYIMDYEDIENKIKD-VK----LFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHS 207 (391)
T ss_dssp HTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EE----EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred HcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CC----EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeecccc
Confidence 899999999987 33 46999999999976 21 222222 245542 3331 1211
Q ss_pred ------------CCc--c-----EEEEcCcccCC-cccccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccc
Q psy852 580 ------------EYA--D-----SFNVNVNKWLL-TAFDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPL 638 (891)
Q Consensus 580 ------------~~a--D-----SIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~ 638 (891)
... | -+..+.||+++ ....+|+++.+++.... .+. ....+ +..
T Consensus 208 ~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~-~~~~~~~~~--------------~~~- 271 (391)
T 4dq6_A 208 DIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYK-LLDDAFTRI--------------DIK- 271 (391)
T ss_dssp TCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHH-HHHHHHHHT--------------TCC-
T ss_pred ccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHH-HHHHHHHhh--------------cCC-
Confidence 011 2 56779999997 44678888887643222 111 00000 000
Q ss_pred cccccchHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHH
Q psy852 639 SRRFRSLKLWFVIRTY--GLSGLQKYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLE 715 (891)
Q Consensus 639 SRr~~aL~lW~~L~~l--G~~G~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~ 715 (891)
....+.+++....+ +.+.+++..++..++++++.+.|++ .+++++..+....+++++++.. +.....+.+
T Consensus 272 --~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 344 (391)
T 4dq6_A 272 --RNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSAL-----GLSDEELES 344 (391)
T ss_dssp --CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGG-----CCCHHHHHH
T ss_pred --CCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhc-----CCCHHHHHH
Confidence 01112222222222 2344777788888999999999988 7899887654444555777531 124568889
Q ss_pred HHHhC-CcEEEeecccc--CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 716 DINAS-GRLHMVPASQE--QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 716 ~L~~~-G~~~~s~s~~~--g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.|.++ |+.+..+.... +...+ ++++ +++++|+++++.|++++
T Consensus 345 ~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 345 ILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp HHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 99888 98755544332 34566 8877 68999999999998764
No 211
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.85 E-value=2.7e-08 Score=110.63 Aligned_cols=247 Identities=11% Similarity=-0.005 Sum_probs=153.6
Q ss_pred CCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHH---HHHHHHcCc--eEEEecCC-CCCCcCH
Q psy852 470 SSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCV---EKAAMMAFV--RLKILEPD-DKNSLRG 543 (891)
Q Consensus 470 sggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv---~Kaa~l~gv--~v~~Vp~d-~~G~mD~ 543 (891)
++|++++..++.++.. +.-.|+++..+|.+. ..++...|. ..+.++++ .++.+|+
T Consensus 92 ~sGt~a~~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (407)
T 2dkj_A 92 HSGSQANMAVYMALME-------------------PGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDL 152 (407)
T ss_dssp SSHHHHHHHHHHHHCC-------------------TTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCH
T ss_pred cchHHHHHHHHHHhcC-------------------CCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCH
Confidence 4457788888776511 112477777888776 344444444 44455545 3789999
Q ss_pred HHHHHHHHhhhhcCCccEEE-EecCCccc--------hhhh-----h----------cC-----CCCccEEEEcCcccCC
Q psy852 544 ATLRQVMQQDETMGYIPFFV-STTLGTTS--------CYRK-----S----------QG-----IEYADSFNVNVNKWLL 594 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~V-vataGTT~--------c~~~-----l----------dG-----i~~aDSIs~d~HK~L~ 594 (891)
++|+++|++. +...+++ ....|+.. |.++ + .| ++.+|.+..++||++.
T Consensus 153 ~~l~~~l~~~---~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~ 229 (407)
T 2dkj_A 153 EEVRRLALEH---RPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLR 229 (407)
T ss_dssp HHHHHHHHHH---CCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGC
T ss_pred HHHHHHHhhc---CCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCC
Confidence 9999999852 1122333 22335332 4331 1 12 2357999999999998
Q ss_pred cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy852 595 TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLF 673 (891)
Q Consensus 595 ~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L 673 (891)
+|.+ |+++.++++...........|. . ++-. .....+..+++.+...++.+..++..++++++
T Consensus 230 g~~~-G~~~~~~~~~~~~l~~~~~~~~--------------~-~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 293 (407)
T 2dkj_A 230 GPRG-GLILSNDPELGKRIDKLIFPGI--------------Q-GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRL 293 (407)
T ss_dssp CCSC-EEEEESCHHHHHHHHHHHTTTT--------------C-SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred CCCc-eEEEECCHHHHHHHHhhhcccc--------------c-CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 8886 9988875433221111111110 0 0111 11223445566555578889999999999999
Q ss_pred HHHhccCCCcEEeCC-CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc------ccCCeEE-EEecC----
Q psy852 674 EGKVRRDPRFEISND-VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS------QEQNDEV-FELQE---- 741 (891)
Q Consensus 674 ~~~L~~~~~~eil~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~------~~g~~~l-~sv~~---- 741 (891)
.+.|++. +++++.+ ...+++++++.+. +.....+.+.|.+.|+....+.. ......+ ++++.
T Consensus 294 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~ 367 (407)
T 2dkj_A 294 AEELARR-GYRIVTGGTDNHLFLVDLRPK-----GLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTR 367 (407)
T ss_dssp HHHHHHT-TCEEGGGSCSSSEEEEECGGG-----TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHT
T ss_pred HHHHHhC-CceeecCCCCceEEEEECccc-----CCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeeccccccc
Confidence 9999987 7888763 4667888888532 11356788889889987554331 1123456 88765
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy852 742 RKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 742 ~tT~edId~li~~L~ei~~ 760 (891)
.+|++|++++++.|+++..
T Consensus 368 ~~~~~~i~~~~~~l~~~~~ 386 (407)
T 2dkj_A 368 GFTPEEMPLVAELIDRALL 386 (407)
T ss_dssp TCCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 3799999999999998763
No 212
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.85 E-value=3.5e-08 Score=110.65 Aligned_cols=243 Identities=12% Similarity=-0.027 Sum_probs=155.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC--CCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~--~G~ 540 (891)
+++ +++|+++++..++.+... +.-.|+++..+|.+...++...|.+++.+|.++ +..
T Consensus 104 ~v~--~~~g~t~a~~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 162 (409)
T 2gb3_A 104 NVL--VTNGGSEAILFSFAVIAN-------------------PGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFA 162 (409)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred HEE--EeCCHHHHHHHHHHHhCC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCc
Confidence 455 778999999988876411 123588888899999999888899999999875 344
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh----------------------hcCCCCccE
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK----------------------SQGIEYADS 584 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~----------------------ldGi~~aDS 584 (891)
+ +++|+++|++.+ ..++++. ..|... |.++ ++++...|.
T Consensus 163 ~-~~~l~~~l~~~~----~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i 237 (409)
T 2gb3_A 163 I-PQNLESFINERT----KGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVV 237 (409)
T ss_dssp C-CTTGGGGCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEE
T ss_pred c-HHHHHHhhCcCC----eEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEE
Confidence 5 888888876521 1223322 245542 3321 122334688
Q ss_pred EEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH--HHhhHHH
Q psy852 585 FNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY--GLSGLQK 661 (891)
Q Consensus 585 Is~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l--G~~G~~~ 661 (891)
+..++||+++.| ..+|+++.++++.+ +.+.....+ ++ ....+.+++....+ +...+++
T Consensus 238 ~~~s~sK~~g~~G~r~G~~~~~~~~l~-~~l~~~~~~-------------~~-----~~~~~~~~a~~~~l~~~~~~~~~ 298 (409)
T 2gb3_A 238 VIDSVSKKFSACGARVGCLITRNEELI-SHAMKLAQG-------------RL-----APPLLEQIGSVGLLNLDDSFFDF 298 (409)
T ss_dssp EEEESTTTTTCGGGCCEEEECSCHHHH-HHHHHHHHH-------------SC-----CCCHHHHHHHHHHHTCCHHHHHH
T ss_pred EEecchhccCCccceEEEEEECcHHHH-HHHHHHHhc-------------cC-----CCCHHHHHHHHHHHhccHHHHHH
Confidence 899999999754 35899988763322 222110000 00 11123333444444 4566788
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEE-eCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhC------CcEEEeeccc----
Q psy852 662 YIRRHCELAKLFEGKVRRDPRFEI-SNDVRLGLVCFRLRSENNLIADQNNRKLLEDINAS------GRLHMVPASQ---- 730 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~~~~~~ei-l~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~------G~~~~s~s~~---- 730 (891)
..++..++++++.+.|++. ++++ ..+.....+.+++.+. ...++.+.|.++ |+.+..+...
T Consensus 299 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~ 370 (409)
T 2gb3_A 299 VRETYRERVETVLKKLEEH-GLKRFTKPSGAFYITAELPVE-------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTP 370 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSSEEEEECSSS-------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSST
T ss_pred HHHHHHHHHHHHHHHHHHc-CceeeeCCCeeEEEEEEeCCC-------CHHHHHHHHHhccccccCcEEEeCchHhCCCC
Confidence 8888899999999999887 7777 4433334555566422 356788888876 8775544332
Q ss_pred -cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 -EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 -~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+...+ ++++ +++++|+++++.|++.+.
T Consensus 371 ~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~ 400 (409)
T 2gb3_A 371 GLGKKEIRIACV--LEKDLLSRAIDVLMEGLK 400 (409)
T ss_dssp TTTSSEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 234566 8877 799999999999998874
No 213
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=98.85 E-value=1.5e-07 Score=102.86 Aligned_cols=250 Identities=10% Similarity=0.001 Sum_probs=163.0
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+.+.+++.+...+. +++ +++|+++++..++.++ . .|+++.-+|.+...++...|
T Consensus 66 l~~~la~~~~~~~~-~i~--~~~g~t~al~~~~~~~-------d----------------~vi~~~~~~~~~~~~~~~~g 119 (361)
T 3ftb_A 66 LNKSIENYLKLKDI-GIV--LGNGASEIIELSISLF-------E----------------KILIIVPSYAEYEINAKKHG 119 (361)
T ss_dssp HHHHHHHHHTCCSC-EEE--EESSHHHHHHHHHTTC-------S----------------EEEEEESCCTHHHHHHHHTT
T ss_pred HHHHHHHHhCCCcc-eEE--EcCCHHHHHHHHHHHc-------C----------------cEEEecCChHHHHHHHHHcC
Confidence 33444555543333 555 6889999998887665 1 37777888999999988889
Q ss_pred ceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hcCC---------
Q psy852 528 VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQGI--------- 579 (891)
Q Consensus 528 v~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ldGi--------- 579 (891)
.+++.+|.++++.+++++|++++++ + ..++++ +..|+.. |.++ +|.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~l~~~l~~-~----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 194 (361)
T 3ftb_A 120 VSVVFSYLDENMCIDYEDIISKIDD-V----DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPS 194 (361)
T ss_dssp CEEEEEECCTTSCCCHHHHHHHTTT-C----SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTT
T ss_pred CeEEEeecCcccCCCHHHHHHhccC-C----CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcc
Confidence 9999999999999999999999875 2 122332 2245543 3331 1211
Q ss_pred ---------CCccEEEEcCcccCCc-ccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHH
Q psy852 580 ---------EYADSFNVNVNKWLLT-AFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWF 649 (891)
Q Consensus 580 ---------~~aDSIs~d~HK~L~~-P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~ 649 (891)
...+-+..+.||.++. ...+|++++.+++........... ++ ...+.+++
T Consensus 195 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~--------------~~------~~~~~~~~ 254 (361)
T 3ftb_A 195 SSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP--------------WN------INCFAEMA 254 (361)
T ss_dssp SSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCT--------------TC------SCHHHHHH
T ss_pred cchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCC--------------CC------CCHHHHHH
Confidence 1112446689999974 467888876665433221111111 11 11222333
Q ss_pred HHHHHH-HhhHHHHHHHHHHHHHHHHHHhccCCCcE-EeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEee
Q psy852 650 VIRTYG-LSGLQKYIRRHCELAKLFEGKVRRDPRFE-ISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVP 727 (891)
Q Consensus 650 ~L~~lG-~~G~~~~i~~~~~lA~~L~~~L~~~~~~e-il~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~ 727 (891)
....+. .+.+.+..++..++++++.+.|++.++++ +. ++..+.+.|++.+. ...++.+.|.++|+.+..+
T Consensus 255 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~g 326 (361)
T 3ftb_A 255 AINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF-SPHANFVLCRLENI-------SGEKLYDSLLKEDIVIRRC 326 (361)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE-CCSSSEEEEEESSS-------CHHHHHHHHHTTTEECEEC
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec-CCCCeEEEEEcCCC-------CHHHHHHHHHHCCeEEeeC
Confidence 333332 35677788888999999999999998988 55 45566788888642 3567889999899875554
Q ss_pred ccc--cCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 728 ASQ--EQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 728 s~~--~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
... .+...+ ++++ +.+++|+++++|+++.
T Consensus 327 ~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 358 (361)
T 3ftb_A 327 CNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVE 358 (361)
T ss_dssp TTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHH
Confidence 433 234566 8876 8899999999998876
No 214
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=98.85 E-value=2.8e-08 Score=112.29 Aligned_cols=81 Identities=14% Similarity=0.155 Sum_probs=67.0
Q ss_pred EEEecCCCChHHHHHHH-H----cCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAM-M----AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~-~----~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~ 218 (891)
.|+++...|.+....+. + .+.+++.++.+ |+++|++++++. +.+|++...+|.+|.+.|+++|+
T Consensus 107 ~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~ 175 (400)
T 3nmy_A 107 HVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-----DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIA 175 (400)
T ss_dssp EEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHH
T ss_pred EEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-----CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHH
Confidence 47788888987766652 2 47788888875 899999988754 35777888999999999999999
Q ss_pred HHHHHcCCceeeecccc
Q psy852 219 PVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~G 235 (891)
++|+++|+++++|.+|+
T Consensus 176 ~la~~~g~~livDe~~~ 192 (400)
T 3nmy_A 176 VIARKHGLLTVVDNTFA 192 (400)
T ss_dssp HHHHHTTCEEEEECTTT
T ss_pred HHHHHcCCEEEEECCCc
Confidence 99999999999999883
No 215
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=98.85 E-value=5.3e-08 Score=110.60 Aligned_cols=86 Identities=9% Similarity=0.103 Sum_probs=69.8
Q ss_pred EEEecC-CCChHHHHH----------HHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeec----ccCcc
Q psy852 144 MAYCSK-EAHSCVEKA----------AMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTL----GTTSC 208 (891)
Q Consensus 144 ~v~~S~-~~H~Sv~ka----------a~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~----Gtt~~ 208 (891)
.|+++. ..|...... +...+.+++.++++++|.+|+++|++++++. +.+|+++. .+|.+
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~npt 176 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPS 176 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCC
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCc
Confidence 366665 667666543 2335779999999999999999999998754 35777777 88999
Q ss_pred ccccCHHHHHHHHHH--cCCceeeecccc
Q psy852 209 CSFDNLAEIGPVAKE--FDVWLHVDGAYA 235 (891)
Q Consensus 209 GavDpl~~I~~i~~~--~~~~lHvDaA~G 235 (891)
|.+.|+++|+++|++ +|+++|+|.|||
T Consensus 177 g~v~~l~~I~~la~~~~~~~~livD~a~~ 205 (409)
T 3jzl_A 177 FTIEKIKEMIVFVKNINPEVIVFVDNCYG 205 (409)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEECTTC
T ss_pred CccccHHHHHHHHHhhCCCCEEEEeCCcc
Confidence 999999999999999 898888998884
No 216
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=98.85 E-value=1.6e-07 Score=103.76 Aligned_cols=239 Identities=10% Similarity=0.063 Sum_probs=149.4
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQ 548 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~ 548 (891)
.++|++++..++.+.. + +.-.|+++...|.+...++...|.+++.+|. +|+++|++
T Consensus 105 ~~sGt~a~~~~~~~~~----~---------------~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~ 160 (384)
T 1bs0_A 105 FISGFAANQAVIAAMM----A---------------KEDRIAADRLSHASLLEAASLSPSQLRRFAH-----NDVTHLAR 160 (384)
T ss_dssp ESCHHHHHHHHHHHHC----C---------------TTCEEEEETTCCHHHHHHHHTSSSEEEEECT-----TCHHHHHH
T ss_pred eCCcHHHHHHHHHHhC----C---------------CCcEEEEcccccHHHHHHHHHcCCCEEEeCC-----CCHHHHHH
Confidence 4456899888775531 0 1225788889999999999888999998884 58999999
Q ss_pred HHHhhhhcCCccEEEEe-c---CCccc--------hhhh----------hcCC-------------CCccEEEEcCcccC
Q psy852 549 VMQQDETMGYIPFFVST-T---LGTTS--------CYRK----------SQGI-------------EYADSFNVNVNKWL 593 (891)
Q Consensus 549 aI~~d~~~g~ip~~Vva-t---aGTT~--------c~~~----------ldGi-------------~~aDSIs~d~HK~L 593 (891)
+|++... . ..++++. . .|+.. |.++ ..|. ...|.+..++||++
T Consensus 161 ~l~~~~~-~-~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~ 238 (384)
T 1bs0_A 161 LLASPCP-G-QQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF 238 (384)
T ss_dssp HHHSCCS-S-CEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT
T ss_pred HHHhcCC-C-CeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh
Confidence 9986421 1 2233332 2 46554 4331 1111 23688889999999
Q ss_pred CcccccEEEEEeCCccchhhhcc-CCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy852 594 LTAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKL 672 (891)
Q Consensus 594 ~~P~g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~ 672 (891)
+ |.| |+++.++ +.+ +.+.. ...|.. +.. .-......+..+++.+....+++..++..+++++
T Consensus 239 ~-~~G-G~~~~~~-~~~-~~l~~~~~~~~~------------~~~-~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 301 (384)
T 1bs0_A 239 G-VSG-AAVLCSS-TVA-DYLLQFARHLIY------------STS-MPPAQAQALRASLAVIRSDEGDARREKLAALITR 301 (384)
T ss_dssp S-SCC-EEEEECH-HHH-HHHHHHCHHHHS------------SBC-CCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred h-ccC-cEEEeCH-HHH-HHHHHhchhhhc------------CCC-CCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 8 555 8887753 222 22211 111110 000 0011112223344433221456778888999999
Q ss_pred HHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc---cCCeEE-EEecCCCCHHHH
Q psy852 673 FEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ---EQNDEV-FELQERKRKDDL 748 (891)
Q Consensus 673 L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~---~g~~~l-~sv~~~tT~edI 748 (891)
+.+.|++. ++++. ++..++++|++.. .....++.+.|.++|+.+..+... .+...+ ++++..+|++|+
T Consensus 302 l~~~L~~~-g~~~~-~~~~~~~~~~~~~------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i 373 (384)
T 1bs0_A 302 FRAGVQDL-PFTLA-DSCSAIQPLIVGD------NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDI 373 (384)
T ss_dssp HHHHHTTS-SCEEC-SCCSSBCCEEEES------HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHH
T ss_pred HHHHHHhc-CCccc-CCCCCEEEEEeCC------HHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHH
Confidence 99999987 67776 3455677777742 224567888998889874433221 234667 999888899999
Q ss_pred HHHHHHHHHH
Q psy852 749 AYKRSFFVRM 758 (891)
Q Consensus 749 d~li~~L~ei 758 (891)
+++++.|+++
T Consensus 374 ~~~~~~l~~~ 383 (384)
T 1bs0_A 374 DRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999864
No 217
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=98.85 E-value=4.8e-08 Score=107.29 Aligned_cols=86 Identities=12% Similarity=-0.013 Sum_probs=73.5
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEec-CCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEP-DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~-d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
.|+++.-+|.++...+...+.+++.+++ ++++ +|+++|++.+++. +.+|+++..+|.+|.+-|++++.++++
T Consensus 108 ~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~ 180 (365)
T 3get_A 108 AFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATEFIK 180 (365)
T ss_dssp EEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHHHHH
Confidence 3778888999999888777889999998 6788 9999999998743 357777889999999999999999998
Q ss_pred --HcCCceeeeccccC
Q psy852 223 --EFDVWLHVDGAYAG 236 (891)
Q Consensus 223 --~~~~~lHvDaA~GG 236 (891)
++|+++++|.+|++
T Consensus 181 ~~~~~~~li~De~~~~ 196 (365)
T 3get_A 181 GVNEDCLVVIDAAYNE 196 (365)
T ss_dssp TSCTTSEEEEECTTHH
T ss_pred hCCCCcEEEEeCccHH
Confidence 67999999999854
No 218
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=98.84 E-value=4e-08 Score=108.78 Aligned_cols=254 Identities=11% Similarity=0.068 Sum_probs=159.7
Q ss_pred HHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceE
Q psy852 451 LFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRL 530 (891)
Q Consensus 451 ~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v 530 (891)
.+++.+...++ +++ +++|+++++..++.++.. +.-.|+++..+|.+...++...|.++
T Consensus 69 ~la~~~~~~~~-~v~--~~~g~~~a~~~~~~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g~~~ 126 (381)
T 1v2d_A 69 ALAEEFAVEPE-SVV--VTSGATEALYVLLQSLVG-------------------PGDEVVVLEPFFDVYLPDAFLAGAKA 126 (381)
T ss_dssp HHHHHHTSCGG-GEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHHHHTTCEE
T ss_pred HHHHhcCCChh-hEE--EcCChHHHHHHHHHHhCC-------------------CCCEEEEcCCCchhHHHHHHHcCCEE
Confidence 34444544333 455 788999999988876521 12257888889999988888889999
Q ss_pred EEecCC---CCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc--------C--
Q psy852 531 KILEPD---DKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ--------G-- 578 (891)
Q Consensus 531 ~~Vp~d---~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld--------G-- 578 (891)
+.+|.+ +++.+|+++|++++++.+ ..++++. ..|+.. |.++ +| |
T Consensus 127 ~~v~~~~~~~~~~~d~~~l~~~l~~~~----~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~ 202 (381)
T 1v2d_A 127 RLVRLDLTPEGFRLDLSALEKALTPRT----RALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGER 202 (381)
T ss_dssp EEEECEEETTEEECCHHHHHTTCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC
T ss_pred EEEeCCCCCccCCcCHHHHHHhcCcCC----EEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC
Confidence 999987 568899999999886421 1222222 245542 3331 11 1
Q ss_pred -------CCCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 579 -------IEYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 579 -------i~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
....|.+..++||+++.| ..+|+++++++ .+ +.+.....+ ..++. + ......+..+
T Consensus 203 ~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~~~~~~~~-----------~~~~~--~-~~~~~a~~~~ 266 (381)
T 1v2d_A 203 PRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE-FM-PRLAGMRQW-----------TSFSA--P-TPLQAGVAEA 266 (381)
T ss_dssp CCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTT-TH-HHHHHHHHH-----------HTSSC--C-HHHHHHHHHH
T ss_pred CCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHH-HH-HHHHHHHhh-----------cccCC--C-cHHHHHHHHH
Confidence 124789999999998755 34899988543 22 222110000 01111 0 0111112223
Q ss_pred HHHHH-HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc
Q psy852 651 IRTYG-LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS 729 (891)
Q Consensus 651 L~~lG-~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~ 729 (891)
|+... .+.+++..++..+++++|.+.|++. ++++..+.....+++++.+. + +...|.+.|+.+..+..
T Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-----~-----~~~~l~~~gi~v~~g~~ 335 (381)
T 1v2d_A 267 LKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYVPEGTYFLMAELPGW-----D-----AFRLVEEARVALIPASA 335 (381)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCSBSSEEEEECTTC-----C-----HHHHHHHTCEECEEGGG
T ss_pred HhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecCCCcceEEEEecChH-----h-----HHHHHHhCCEEEecchH
Confidence 33221 4567788888899999999999884 78887654455777777532 1 55667788988655443
Q ss_pred cc----CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 730 QE----QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 730 ~~----g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.. +...+ ++++. ++++|+++++.|++++
T Consensus 336 ~~~~~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l 368 (381)
T 1v2d_A 336 FYLEDPPKDLFRFAFCK--TEEELHLALERLGRVV 368 (381)
T ss_dssp GCSSSCCTTEEEEECCS--CHHHHHHHHHHHHHHC
T ss_pred hCCCCCCCCEEEEEeCC--CHHHHHHHHHHHHHHH
Confidence 32 34566 88875 8999999999998775
No 219
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=98.84 E-value=2.4e-08 Score=121.25 Aligned_cols=277 Identities=10% Similarity=-0.036 Sum_probs=165.3
Q ss_pred HHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHH-HHHcCce
Q psy852 451 LFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA-AMMAFVR 529 (891)
Q Consensus 451 ~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Ka-a~l~gv~ 529 (891)
.+++.+.... .++ +++|++++|..++.+... +.-.|+++..+|.|+..+ +.+.|.+
T Consensus 181 ~lA~~~gae~--~i~--v~nGtt~an~~ai~al~~-------------------pGD~VLv~~~~H~S~~~~~~~l~Ga~ 237 (730)
T 1c4k_A 181 HAARVYNADK--TYF--VLGGSSNANNTVTSALVS-------------------NGDLVLFDRNNHKSVYNSALAMAGGR 237 (730)
T ss_dssp HHHHHTTCSE--EEE--ESSHHHHHHHHHHHHHCC-------------------TTCEEEEETTCCHHHHHHHTTTTCCE
T ss_pred HHHHHHCCCc--EEE--ECCHHHHHHHHHHHHhcC-------------------CCCEEEEcCCchHHHHHHHHHHCCCE
Confidence 4445554432 344 566777898888776311 123589999999999998 6788889
Q ss_pred EEEecCCCC-----CCcCHHHH-----HHHHHhh-hh---cCC--ccEEEEec--CCccc--------hhhh-----hc-
Q psy852 530 LKILEPDDK-----NSLRGATL-----RQVMQQD-ET---MGY--IPFFVSTT--LGTTS--------CYRK-----SQ- 577 (891)
Q Consensus 530 v~~Vp~d~~-----G~mD~~~L-----e~aI~~d-~~---~g~--ip~~Vvat--aGTT~--------c~~~-----ld- 577 (891)
++.++.+.+ |.+|+++| +++|++. .. ... ..++++.. .|+.. |+++ +|
T Consensus 238 ~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDe 317 (730)
T 1c4k_A 238 PVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDS 317 (730)
T ss_dssp EEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEEC
T ss_pred EEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEc
Confidence 888876432 56899998 8887653 11 101 12333322 24332 3321 11
Q ss_pred ----------------CCC----Ccc----EEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccC
Q psy852 578 ----------------GIE----YAD----SFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRH 633 (891)
Q Consensus 578 ----------------Gi~----~aD----SIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~ 633 (891)
.+. ++| .++.++||++++|.+.|+++++++.. .....++... .+...-
T Consensus 318 Ah~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l-----~g~~~~i~~~---~~~~~~ 389 (730)
T 1c4k_A 318 AWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI-----KGQLRYCDHK---HFNNSF 389 (730)
T ss_dssp TTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG-----TTSTTCCCHH---HHHHHH
T ss_pred ccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh-----cCcccccCHH---HHHHHH
Confidence 121 477 99999999999999999999998732 0111111100 000000
Q ss_pred Cccccccc-cc-chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCc--------------------
Q psy852 634 WGIPLSRR-FR-SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR-DPRFEISNDVR-------------------- 690 (891)
Q Consensus 634 ~ti~~SRr-~~-aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~-------------------- 690 (891)
...+.+-+ .. ...+-.+++.+..++..+.+++..++++++.+.|++ +++++++.+..
T Consensus 390 ~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~ 469 (730)
T 1c4k_A 390 NLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDY 469 (730)
T ss_dssp HHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGG
T ss_pred HHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchh
Confidence 00000111 00 112223334444434466788999999999999998 79999875421
Q ss_pred -----------------------eeEEEEEecCCc--c---hhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecC
Q psy852 691 -----------------------LGLVCFRLRSEN--N---LIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQE 741 (891)
Q Consensus 691 -----------------------~~iV~Fr~~~~~--~---~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~ 741 (891)
...|.|..++.+ . .........+.+.|.++|+.. ...+...+ ++++.
T Consensus 470 ~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v----~~~~~~~ir~~~s~ 545 (730)
T 1c4k_A 470 WRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIP----EKSDLNSILFLMTP 545 (730)
T ss_dssp GBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCC----SEECSSEEEEECCT
T ss_pred hccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEE----EECCCCeEEEEeCC
Confidence 112667764310 0 111234567888898889762 22345556 88999
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q psy852 742 RKRKDDLAYKRSFFVRMLGLV 762 (891)
Q Consensus 742 ~tT~edId~li~~L~ei~~~~ 762 (891)
.+|++++++++++|+++....
T Consensus 546 g~t~e~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 546 AETPAKMNNLITQLLQLQRLI 566 (730)
T ss_dssp TCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999887533
No 220
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=98.83 E-value=2.7e-08 Score=112.12 Aligned_cols=265 Identities=9% Similarity=-0.008 Sum_probs=162.7
Q ss_pred HHHHHHHhhc--cCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 448 LAKLFEGKVR--RDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 448 lAr~l~~~L~--~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
+++++.+... ..+. +|+ +++|++|++..++.++.. +...|++...+|.+...++..
T Consensus 105 l~~~l~~~~g~~~~~~-~v~--~~~g~~ea~~~a~~~~~~-------------------~gd~Vi~~~~~y~~~~~~~~~ 162 (421)
T 3l8a_A 105 VIDWERKEHDYAVVKE-DIL--FIDGVVPAISIALQAFSE-------------------KGDAVLINSPVYYPFARTIRL 162 (421)
T ss_dssp HHHHHHHHHCCCCCGG-GEE--EESCHHHHHHHHHHHHSC-------------------TEEEEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHH-HEE--EcCCHHHHHHHHHHHhcC-------------------CCCEEEECCCCcHHHHHHHHH
Confidence 4445544443 2222 455 788999999998877521 123477888889898888888
Q ss_pred cCceEEEecCC-CC--CCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hcCC----
Q psy852 526 AFVRLKILEPD-DK--NSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQGI---- 579 (891)
Q Consensus 526 ~gv~v~~Vp~d-~~--G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ldGi---- 579 (891)
.+.+++.+|.+ ++ +.+|+++|+++|++.. ...++++ +..|... |.++ +|.+
T Consensus 163 ~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~---~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~ 239 (421)
T 3l8a_A 163 NDHRLVENSLQIINGRFEIDFEQLEKDIIDNN---VKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDL 239 (421)
T ss_dssp TTEEEEEEECEEETTEEECCHHHHHHHHHHTT---EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred CCCEEEeccccccCCCeeeCHHHHHHHhhccC---CeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 89999999975 33 4799999999998421 1123333 2345441 4331 1211
Q ss_pred -----------------CCccEEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc
Q psy852 580 -----------------EYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR 641 (891)
Q Consensus 580 -----------------~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr 641 (891)
...+-...+++|+++ ....+|+++.++++.. +.+..... .++....-.
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~-~~~~~~~~-------------~~~~~~~n~ 305 (421)
T 3l8a_A 240 ALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLR-RKFQYRQL-------------ANNQHEVPT 305 (421)
T ss_dssp BCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHH-HHHHHHHH-------------HTTCSCCCH
T ss_pred ccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHH-HHHHHHHH-------------hcccCCCCH
Confidence 122366788999997 4477899998855432 22211000 000101111
Q ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHh-C
Q psy852 642 FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINA-S 720 (891)
Q Consensus 642 ~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~-~ 720 (891)
+....+..+++. +.+.+++..++..+++++|.+.|++.+++++..+....++++.+... .....++.+.|.+ .
T Consensus 306 ~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~-----~~~~~~l~~~l~~~~ 379 (421)
T 3l8a_A 306 VGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAY-----AIAQPQLSEKLQNEA 379 (421)
T ss_dssp HHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGG-----TCCTTHHHHHHHHTT
T ss_pred HHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEecccc-----CCCHHHHHHHHHHhC
Confidence 222233333332 44557788888889999999999887889887655544555776531 1134567888864 5
Q ss_pred CcEEEeeccc--cCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 721 GRLHMVPASQ--EQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 721 G~~~~s~s~~--~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
|+++..+... .+..++ +++. +++++|+++++.|++++
T Consensus 380 gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 419 (421)
T 3l8a_A 380 KVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVF 419 (421)
T ss_dssp CEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred CEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHH
Confidence 8875554433 334566 8876 68999999999998764
No 221
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.83 E-value=8.1e-08 Score=108.38 Aligned_cols=93 Identities=10% Similarity=0.072 Sum_probs=73.9
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhc--CCcceEE-EeecccCccccccC---HHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETM--GYIPFFV-STTLGTTSCCSFDN---LAEI 217 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~--g~~p~~V-~~t~Gtt~~GavDp---l~~I 217 (891)
.|++..-+|++...++...|.+++.+|.+++| +|+++|++.+++..++ +..+.+| +.+..+|.+|.+-| +++|
T Consensus 135 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l 213 (425)
T 1vp4_A 135 YCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKAL 213 (425)
T ss_dssp EEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHH
Confidence 37777788999988887778899999998876 9999999999863211 1224454 56778899999976 5688
Q ss_pred HHHHHHcCCceeeeccccCC
Q psy852 218 GPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 218 ~~i~~~~~~~lHvDaA~GG~ 237 (891)
+++|+++|+++++|.+|+++
T Consensus 214 ~~~~~~~~~~li~De~~~~~ 233 (425)
T 1vp4_A 214 VEIAEKYDLFIVEDDPYGAL 233 (425)
T ss_dssp HHHHHHTTCEEEEECSSTTC
T ss_pred HHHHHHcCCEEEEECCCccc
Confidence 89999999999999999664
No 222
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=98.83 E-value=9e-08 Score=107.11 Aligned_cols=257 Identities=9% Similarity=0.033 Sum_probs=153.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC-CCCCcCHHHH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKNSLRGATL 546 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d-~~G~mD~~~L 546 (891)
++++|++++..++.+.. . .+.-.|+++...|.+...++...|.+++.++++ +++.+|+++|
T Consensus 58 ~~~sgt~al~~al~~l~---~---------------~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l 119 (377)
T 3ju7_A 58 TVANATLGLMAAIQLKK---R---------------KKGKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVL 119 (377)
T ss_dssp EESCHHHHHHHHHHHHS---C---------------TTCCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHH
T ss_pred EeCCHHHHHHHHHHHcC---C---------------CCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHH
Confidence 56789999988876531 0 112358899999999999998899999999998 5789999999
Q ss_pred HHHH-HhhhhcCCccEEEEecCCccc--------hhhh-----hcC------------C----CCccEEEEcCcccCCcc
Q psy852 547 RQVM-QQDETMGYIPFFVSTTLGTTS--------CYRK-----SQG------------I----EYADSFNVNVNKWLLTA 596 (891)
Q Consensus 547 e~aI-~~d~~~g~ip~~VvataGTT~--------c~~~-----ldG------------i----~~aDSIs~d~HK~L~~P 596 (891)
+++| ++... ...++++...|+.. |+ + .|+ + ..++.+++++||+++++
T Consensus 120 ~~~i~~~~~~--tk~v~~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g 196 (377)
T 3ju7_A 120 WDKIEELKEE--VAIVVPYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIG 196 (377)
T ss_dssp HHHHHHHGGG--EEEECCBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCB
T ss_pred HHHHhcCCCC--ceEEEEECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCC
Confidence 9999 44300 11222344456543 33 2 111 1 23566777799999973
Q ss_pred cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q psy852 597 FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGK 676 (891)
Q Consensus 597 ~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~ 676 (891)
..|+++.++++.....-......... .+.....+. .-+...+..|..+ .+.+.+.+.+++..++++++.+.
T Consensus 197 -~gG~~~~~~~~l~~~~~~~~~~g~~~----~~~~~~~g~--~~~~~~~~aa~~~--~~l~~l~~~~~~~~~~~~~~~~~ 267 (377)
T 3ju7_A 197 -EGGLIYSKNEEDIQRIKRMGNFGFDT----NRECTMMGF--NCKMSEYAAAIGI--ATMKKWDDKLKERTRISEWYKQL 267 (377)
T ss_dssp -SCEEEEESCHHHHHHHHHHTBTTBCT----TSCBCSSCC--BCCCCHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHH
T ss_pred -CcEEEEECCHHHHHHHHHHHhcCCCC----CCceeeccc--cCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666554322211111100000 000000111 1123344444433 34577888899999999999999
Q ss_pred hccCCCcEE-eCCC--c---eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec--cc------c-----------
Q psy852 677 VRRDPRFEI-SNDV--R---LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA--SQ------E----------- 731 (891)
Q Consensus 677 L~~~~~~ei-l~~~--~---~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s--~~------~----------- 731 (891)
|++++++.+ +.+. . ...+.+++.+. ...+.+.+.|.++|+...... .+ .
T Consensus 268 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 341 (377)
T 3ju7_A 268 LQSNGLMKKGWQLQKTEAVIQQFMPILCPEE------VRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTN 341 (377)
T ss_dssp HHHTTTTTTTCBCCCCSCBCCSSEEEECCTT------SCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHH
T ss_pred hcCCCCccccccCCCCCcceEEEEEEEeCCh------hhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHH
Confidence 998876432 1111 1 12345555421 125789999999998643321 11 0
Q ss_pred --CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 --QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 --g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
....+ +.+++.+|++||+++++.|++++.
T Consensus 342 ~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~ 373 (377)
T 3ju7_A 342 KIAKRIVSLPLWEGMTKEIVEQIVICLGQKVV 373 (377)
T ss_dssp HHHHHEEEECCCTTCCHHHHHHHHHHHTC---
T ss_pred HHHhCEEECCCCCCCCHHHHHHHHHHHHHHHh
Confidence 01256 778889999999999999987764
No 223
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=98.83 E-value=1.7e-07 Score=104.87 Aligned_cols=236 Identities=11% Similarity=0.087 Sum_probs=148.2
Q ss_pred CCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHH
Q psy852 470 SSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQV 549 (891)
Q Consensus 470 sggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~a 549 (891)
++|+++|..++.+... +.-.|+++...|.+...++.+.+.+++.++. +|+++|+++
T Consensus 126 ~sGt~a~~~~l~~~~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~le~~ 181 (409)
T 3kki_A 126 QSGWNANVGLLQTICQ-------------------PNTNVYIDFFAHMSLWEGARYANAQAHPFMH-----NNCDHLRML 181 (409)
T ss_dssp SCHHHHHHHHHHHHCC-------------------TTCEEEEETTSCHHHHHHHHHTTCEEEEECT-----TCHHHHHHH
T ss_pred cchHHHHHHHHHHhcC-------------------CCCEEEECCCcCHHHHHHHHHcCCeEEEecC-----CCHHHHHHH
Confidence 4567998877764311 2235788999999999999988988887775 689999999
Q ss_pred HHhhhhcCCccEEEEec---CCccc--------hhhh-----hc-------------------CC-CCccEEEEcCcccC
Q psy852 550 MQQDETMGYIPFFVSTT---LGTTS--------CYRK-----SQ-------------------GI-EYADSFNVNVNKWL 593 (891)
Q Consensus 550 I~~d~~~g~ip~~Vvat---aGTT~--------c~~~-----ld-------------------Gi-~~aDSIs~d~HK~L 593 (891)
|++.. ...++++.. .|+.. |.++ +| ++ +.+|.+..++||++
T Consensus 182 l~~~~---~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~ 258 (409)
T 3kki_A 182 IQRHG---PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTF 258 (409)
T ss_dssp HHHHC---SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTT
T ss_pred HHhcC---CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhh
Confidence 98742 123333322 34443 4331 11 11 24789999999999
Q ss_pred CcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccc-cccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy852 594 LTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSR-RFRSLKLWFVIRTYGLSGLQKYIRRHCELAKL 672 (891)
Q Consensus 594 ~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SR-r~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~ 672 (891)
+.+ .|+++.++. ...........|... .+- ......+..+++.+.. ..+..++..+++++
T Consensus 259 ~~~--gg~v~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~ 319 (409)
T 3kki_A 259 AYR--AGAIWCNNE-VNRCVPFISYPAIFS--------------STLLPYEAAGLETTLEIIES--ADNRRQHLDRMARK 319 (409)
T ss_dssp CSS--CEEEEESSS-GGGTHHHHCHHHHHS--------------BCCCHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHH
T ss_pred CCC--ceEEEECHH-HHHHHHHhCcCcccc--------------CCCcHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHH
Confidence 977 366555443 222111111111100 000 1111223333443322 25666777889999
Q ss_pred HHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec---cccCCeEE-EEecCCCCHHHH
Q psy852 673 FEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA---SQEQNDEV-FELQERKRKDDL 748 (891)
Q Consensus 673 L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s---~~~g~~~l-~sv~~~tT~edI 748 (891)
|.+.|++. ++++. ...+++.+++.+ .....++.+.|.++|++..... ...+...+ ++++..+|++||
T Consensus 320 l~~~L~~~-g~~~~--~~~~~~~~~~~~------~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i 390 (409)
T 3kki_A 320 LRIGLSQL-GLTIR--SESQIIGLETGD------ERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQI 390 (409)
T ss_dssp HHHHHHTT-TCCCC--CSSSEEEEEEES------HHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHH
T ss_pred HHHHHHHc-CCccC--CCCCEEEEEeCC------HHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHH
Confidence 99999886 56655 356788888753 2245678899999998743222 22345677 999989999999
Q ss_pred HHHHHHHHHHHH
Q psy852 749 AYKRSFFVRMLG 760 (891)
Q Consensus 749 d~li~~L~ei~~ 760 (891)
+++++.|++++.
T Consensus 391 ~~~~~~l~~~l~ 402 (409)
T 3kki_A 391 AKIIEVCSDAVN 402 (409)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998763
No 224
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=98.82 E-value=6.7e-08 Score=107.09 Aligned_cols=244 Identities=11% Similarity=0.037 Sum_probs=153.3
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC--CCCc
Q psy852 464 ISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNSL 541 (891)
Q Consensus 464 Vv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~--~G~m 541 (891)
++ +++|+++++..++.+.. .+.-.|+++..+|++...++...|.+++.+|.++ ++.+
T Consensus 90 v~--~~~g~~~a~~~~~~~~~-------------------~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 148 (389)
T 1gd9_A 90 IM--VLLGANQAFLMGLSAFL-------------------KDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRL 148 (389)
T ss_dssp EE--EESSTTHHHHHHHTTTC-------------------CTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCC
T ss_pred EE--EcCChHHHHHHHHHHhC-------------------CCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCC
Confidence 55 68899999988876531 0123588888889999988888899999999875 4679
Q ss_pred CHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----h---------c-----------CCCCc
Q psy852 542 RGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----S---------Q-----------GIEYA 582 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----l---------d-----------Gi~~a 582 (891)
|+++|+++++++. ..++++. ..|.+. |.++ + + +....
T Consensus 149 d~~~l~~~l~~~~----~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 224 (389)
T 1gd9_A 149 NVDELKKYVTDKT----RALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFER 224 (389)
T ss_dssp CHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred CHHHHHHhcCcCc----eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCC
Confidence 9999999997531 1222222 245442 3321 1 1 11245
Q ss_pred cEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH--HHh--
Q psy852 583 DSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY--GLS-- 657 (891)
Q Consensus 583 DSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l--G~~-- 657 (891)
|.+..++||+++.| ..+|+++.+++ +.+.+.....+. .++. ..+.+++....+ +..
T Consensus 225 ~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~l~~~~~~~-----------~~~~------~~~~~~a~~~~l~~~~~~~ 285 (389)
T 1gd9_A 225 TITVNGFSKTFAMTGWRLGFVAAPSW--IIERMVKFQMYN-----------ATCP------VTFIQYAAAKALKDERSWK 285 (389)
T ss_dssp EEEEEESTTTTTCGGGCCEEEECCHH--HHHHHHHHHTTT-----------TCSC------CHHHHHHHHHHHTCHHHHH
T ss_pred EEEEecChhhcCCcccceEEEEECHH--HHHHHHHHHhhh-----------ccCC------CHHHHHHHHHHHhCCCcch
Confidence 78899999998745 45799888642 222221100000 0111 112223333333 233
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeeccc--cCCe
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQ--EQND 734 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~--~g~~ 734 (891)
.+++..++..++++++.+.|++. ++++..+.....+++++.+. +....++.+.|. +.|+.+..+... .+..
T Consensus 286 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 359 (389)
T 1gd9_A 286 AVEEMRKEYDRRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIRDT-----GLTSKKFSELMLKEARVAVVPGSAFGKAGEG 359 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCBTTEECCBCGGG-----TCCHHHHHHHHHHHTCEECEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEeccCC-----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCC
Confidence 67778888889999999999987 77776543333566666421 113567888887 789875544332 2244
Q ss_pred EE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 735 EV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 735 ~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.+ ++++. ++++|+++++.|++.+
T Consensus 360 ~iRi~~~~--~~~~i~~~l~~l~~~~ 383 (389)
T 1gd9_A 360 YVRISYAT--AYEKLEEAMDRMERVL 383 (389)
T ss_dssp BEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred eEEEEecC--CHHHHHHHHHHHHHHH
Confidence 56 88764 8999999999998776
No 225
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.82 E-value=1.9e-07 Score=105.48 Aligned_cols=255 Identities=11% Similarity=0.009 Sum_probs=156.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH-HcCceEEEecCCCC--C
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM-MAFVRLKILEPDDK--N 539 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~-l~gv~v~~Vp~d~~--G 539 (891)
+++ +++|++++|..++.+... +.-.|++....|.+...++. ..|.+++.+|.+++ .
T Consensus 113 ~v~--~~~gg~~a~~~~~~~l~~-------------------~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 171 (435)
T 3piu_A 113 HLV--LTAGATSANETFIFCLAD-------------------PGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGF 171 (435)
T ss_dssp GEE--EEEHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTS
T ss_pred HEE--EcCChHHHHHHHHHHhcC-------------------CCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCC
Confidence 555 788999999988866421 11247788888988888877 68899999998764 5
Q ss_pred CcCHHHHHHHHHhhhhcCCccEEEE-e----cCCccc-----------hhhh-----hcCC---------C---------
Q psy852 540 SLRGATLRQVMQQDETMGYIPFFVS-T----TLGTTS-----------CYRK-----SQGI---------E--------- 580 (891)
Q Consensus 540 ~mD~~~Le~aI~~d~~~g~ip~~Vv-a----taGTT~-----------c~~~-----ldGi---------~--------- 580 (891)
.+|+++|+++|++....+..+-+|+ . ..|++. |.++ +|.+ .
T Consensus 172 ~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~ 251 (435)
T 3piu_A 172 QITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLK 251 (435)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhcc
Confidence 6999999999987544332232222 2 245543 4331 1211 0
Q ss_pred -----------CccEEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHH
Q psy852 581 -----------YADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLW 648 (891)
Q Consensus 581 -----------~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW 648 (891)
..+-+..++||+++ ....+|+++.+++... ..+.....+. + . ..+.++
T Consensus 252 ~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~-~~~~~~~~~~-------------~--~----~~~~~~ 311 (435)
T 3piu_A 252 DRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATKMSSFG-------------L--V----SSQTQH 311 (435)
T ss_dssp C-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH-HHHHHHGGGS-------------C--C----CHHHHH
T ss_pred ccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH-HHHHHHhhcC-------------C--C----CHHHHH
Confidence 01155789999997 4467899988655322 2221100000 0 0 112222
Q ss_pred HHHHHHH-----HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhC-Cc
Q psy852 649 FVIRTYG-----LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINAS-GR 722 (891)
Q Consensus 649 ~~L~~lG-----~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~ 722 (891)
.....+. .+.+.+..++..+++++|.+.|++. +++++.+.....+.+.+.............++.++|.++ |+
T Consensus 312 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi 390 (435)
T 3piu_A 312 LLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHL 390 (435)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCE
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCE
Confidence 2222222 2244566677788899999999886 788775544467788875321110011345788888776 88
Q ss_pred EEEeeccc--cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 723 LHMVPASQ--EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 723 ~~~s~s~~--~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+..+... .+...+ +++... ++++|+++++.|++++.
T Consensus 391 ~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~ 430 (435)
T 3piu_A 391 NISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVG 430 (435)
T ss_dssp ECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHH
T ss_pred EEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHH
Confidence 75544432 345667 888655 99999999999998764
No 226
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=98.82 E-value=7.2e-08 Score=107.51 Aligned_cols=249 Identities=9% Similarity=0.075 Sum_probs=154.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+++ +++|+++++..++.++.. +.-.|++..-+|.+...++...|.+++.+|.+++| +|
T Consensus 100 ~v~--~t~g~t~a~~~~~~~~~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d 157 (407)
T 2zc0_A 100 NIV--ITIGGTGALDLLGRVLID-------------------PGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDG-MR 157 (407)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-EC
T ss_pred eEE--EecCHHHHHHHHHHHhcC-------------------CCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CC
Confidence 455 788999999988877531 11247788888888888888889999999988776 99
Q ss_pred HHHHHHHHHhhhhcC-CccEE-EEec----CCccc-----------hhhh-----hc---------C-----C---C--C
Q psy852 543 GATLRQVMQQDETMG-YIPFF-VSTT----LGTTS-----------CYRK-----SQ---------G-----I---E--Y 581 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g-~ip~~-Vvat----aGTT~-----------c~~~-----ld---------G-----i---~--~ 581 (891)
+++|+++|++....+ ..-++ ++.+ .|+.. |.++ +| | + . .
T Consensus 158 ~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 237 (407)
T 2zc0_A 158 VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEG 237 (407)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSC
T ss_pred HHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCC
Confidence 999999998422121 12222 2222 45432 3331 11 1 0 0 1
Q ss_pred ccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH----
Q psy852 582 ADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL---- 656 (891)
Q Consensus 582 aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~---- 656 (891)
.+-+..+.||+++ | ..+|+++.++ + +.+.+...... ++.. ...+.+++....+..
T Consensus 238 ~~i~~~s~sK~~~-~G~r~G~~~~~~-~-~~~~~~~~~~~-------------~~~~----~~~~~~~~~~~~l~~~~~~ 297 (407)
T 2zc0_A 238 RVIVAGTLSKVLG-TGFRIGWIIAEG-E-ILKKVLMQKQP-------------IDFC----APAISQYIALEYLKRGYFE 297 (407)
T ss_dssp CEEEEEESTTTTC-TTSCCEEEECCH-H-HHHHHHHHHTT-------------TTSS----SCHHHHHHHHHHHHTTHHH
T ss_pred CEEEEcccccccC-CCcceEEEecCH-H-HHHHHHHHHHh-------------hcCC----CCHHHHHHHHHHHHcCCch
Confidence 1235667899999 5 4589998853 2 22222210000 0000 112223333333321
Q ss_pred -hhHHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhC-CcEEEeecccc--
Q psy852 657 -SGLQKYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINAS-GRLHMVPASQE-- 731 (891)
Q Consensus 657 -~G~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~~~s~s~~~-- 731 (891)
..+++..++..+++++|.+.|++ .+++++..+.....++|++++. ....++.+.|.++ |+.+..+....
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~gi~v~~g~~~~~~ 371 (407)
T 2zc0_A 298 KYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEG------ADGISFANELMEREGVVVVPGKPFYTD 371 (407)
T ss_dssp HHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTT------CCHHHHHHHHHHHTCEECBCSGGGCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCC------CCHHHHHHHHHHhCCeEEECchhccCC
Confidence 34556667778889999999987 5777776555556788888531 1356788889888 98755443331
Q ss_pred --CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 --QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 --g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+...+ ++++.. |++||+++++.|++++.
T Consensus 372 ~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~ 402 (407)
T 2zc0_A 372 ESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYK 402 (407)
T ss_dssp SCCTTEEEEECSSS-CTTHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHH
Confidence 34567 988776 89999999999998764
No 227
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.82 E-value=9.9e-08 Score=108.44 Aligned_cols=88 Identities=6% Similarity=0.060 Sum_probs=67.9
Q ss_pred EecCCCC-hHHHHHHHHcCCeEEEEecCC----------CCcccHHHHHHHHHhhhhcCCcceEEEeecccC-ccccccC
Q psy852 146 YCSKEAH-SCVEKAAMMAFVRLKILEPDD----------KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTT-SCCSFDN 213 (891)
Q Consensus 146 ~~S~~~H-~Sv~kaa~~~~~~v~~V~~d~----------~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt-~~GavDp 213 (891)
+++..+| .+...++...|.+++.+++++ ++.+|+++|++++++.+. ..+.+|+++..+| .+|.+-|
T Consensus 116 i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~ 193 (456)
T 2ez2_A 116 YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVS 193 (456)
T ss_dssp EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCC
T ss_pred EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCC
Confidence 3445566 777777777788999999874 278999999999986531 1234666665555 8998876
Q ss_pred ---HHHHHHHHHHcCCceeeecccc
Q psy852 214 ---LAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 214 ---l~~I~~i~~~~~~~lHvDaA~G 235 (891)
+++|+++|+++|++|++|.+|+
T Consensus 194 ~~~l~~i~~la~~~~i~li~De~~~ 218 (456)
T 2ez2_A 194 MANMRAVRELTEAHGIKVFYDATRC 218 (456)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTH
T ss_pred HHHHHHHHHHHHHcCCeEEEEcccc
Confidence 9999999999999999999984
No 228
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=98.81 E-value=7.3e-08 Score=104.51 Aligned_cols=80 Identities=9% Similarity=0.085 Sum_probs=66.9
Q ss_pred EEEecCCCChHHHHHHH----HcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAM----MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~----~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.+...++. ..+.+++.++. +|+++|++.+++. +.+|+++..+|.+|.+.|+++|.+
T Consensus 39 ~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~ 107 (331)
T 1pff_A 39 HLISDDCLYGCTHALFEHQLRKFGVEVDFIDM-----AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVK 107 (331)
T ss_dssp EEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHH
Confidence 37888899999877762 35778888876 4888998887643 457888999999999999999999
Q ss_pred HHHH-cCCceeeeccc
Q psy852 220 VAKE-FDVWLHVDGAY 234 (891)
Q Consensus 220 i~~~-~~~~lHvDaA~ 234 (891)
+|++ +|+++++|.||
T Consensus 108 ~~~~~~~~~li~D~a~ 123 (331)
T 1pff_A 108 QARKQKDILVIVDNTF 123 (331)
T ss_dssp HHTTSSSCEEEEECTT
T ss_pred HHhhhcCCEEEEECCC
Confidence 9999 99999999988
No 229
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.81 E-value=5e-08 Score=108.51 Aligned_cols=247 Identities=9% Similarity=0.022 Sum_probs=155.1
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC------C
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP------D 536 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~------d 536 (891)
+++ +++|+++++..++.+.. .+.-.|+++.-.|.+...++...|.+++.+|. +
T Consensus 104 ~i~--~~~g~~~a~~~~~~~l~-------------------~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (407)
T 3nra_A 104 GLI--ITPGTQGALFLAVAATV-------------------ARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADE 162 (407)
T ss_dssp SEE--EESHHHHHHHHHHHTTC-------------------CTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCC
T ss_pred cEE--EeCCcHHHHHHHHHHhC-------------------CCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccC
Confidence 455 67899999988775531 11235888888999999999999999999998 4
Q ss_pred CCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C----------
Q psy852 537 DKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G---------- 578 (891)
Q Consensus 537 ~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G---------- 578 (891)
.++.+|+++|+++|++.+ ..++++. ..|+.. |.++ +| |
T Consensus 163 ~~~~~d~~~l~~~l~~~~----~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~ 238 (407)
T 3nra_A 163 TRAGLDLTGLEEAFKAGA----RVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEA 238 (407)
T ss_dssp SSCCBCHHHHHHHHHTTC----CEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCT
T ss_pred cCCCcCHHHHHHHHhhCC----cEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcC
Confidence 788999999999998632 1222322 234443 3331 11 1
Q ss_pred --CCCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH-
Q psy852 579 --IEYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY- 654 (891)
Q Consensus 579 --i~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l- 654 (891)
....+-+..++||+++.| ..+|+++...+ +.+.+.....+. .++. ..+.+++....+
T Consensus 239 ~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~--~~~~l~~~~~~~-----------~~~~------~~~~~~a~~~~l~ 299 (407)
T 3nra_A 239 AVDAENVVTIMGPSKTESLSGYRLGVAFGSRA--IIARMEKLQAIV-----------SLRA------AGYSQAVLRGWFD 299 (407)
T ss_dssp TSCGGGEEEEECSSSTTCCGGGCCEEEEECHH--HHHHHHHHHHHH-----------TSSS------CHHHHGGGGGTTC
T ss_pred cccCCcEEEEeCcccccCCCeeeEEEEEcCHH--HHHHHHHHHhhh-----------ccCC------ChHHHHHHHHHHh
Confidence 012346778899999844 67888877432 222221100000 0000 011111222222
Q ss_pred -HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHh-CCcEEEeecccc-
Q psy852 655 -GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINA-SGRLHMVPASQE- 731 (891)
Q Consensus 655 -G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~-~G~~~~s~s~~~- 731 (891)
+...+.+..++..+++++|.+.|++.+++++..+.....+.+.+... +.....+.+.|.+ .|+.+..+....
T Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~~~~ 374 (407)
T 3nra_A 300 EAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKL-----AVAPAEFVKILRLQAGVVVTPGTEFSP 374 (407)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCB-----SSCHHHHHHHHHHHHCEECEEGGGTCT
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCC-----CCCHHHHHHHHHHhCCEEEeCchhhCC
Confidence 22456777888889999999999998888887655545666666432 1245678888865 598755444332
Q ss_pred -CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 -QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 -g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+...+ ++++. ++++|+++++.|++++.
T Consensus 375 ~~~~~iRis~~~--~~~~i~~~~~~l~~~~~ 403 (407)
T 3nra_A 375 HTADSVRLNFSQ--DHEAAVAAARRIVTLVE 403 (407)
T ss_dssp TCTTBEEEECCS--CHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCC--CHHHHHHHHHHHHHHHH
Confidence 34556 88763 89999999999998763
No 230
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=98.80 E-value=7.6e-08 Score=105.33 Aligned_cols=83 Identities=14% Similarity=0.141 Sum_probs=61.1
Q ss_pred EEEecCCCChHHHHH--H-HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc-ccccCHHHH--
Q psy852 144 MAYCSKEAHSCVEKA--A-MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC-CSFDNLAEI-- 217 (891)
Q Consensus 144 ~v~~S~~~H~Sv~ka--a-~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~-GavDpl~~I-- 217 (891)
+|+++...|++.... . ...+.+++.++. +++.+|+++|+++ .++ +.+|+++-.+|.+ |.+.|++++
T Consensus 91 vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~~~------~~~v~~~~p~n~~~G~~~~~~~l~~ 162 (359)
T 3pj0_A 91 RVAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDDIKSL-REP------VSSVLIELPQREIGGQLPAFEELEK 162 (359)
T ss_dssp EEEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-SSC------CSEEEEESSBGGGTSBCCCHHHHHH
T ss_pred EEEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHHHHhc-cCC------ceEEEEEecccCCCcccCCHHHHHH
Confidence 477777888877542 2 345778888887 5789999999987 222 3456665555555 788776655
Q ss_pred -HHHHHHcCCceeeeccc
Q psy852 218 -GPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 218 -~~i~~~~~~~lHvDaA~ 234 (891)
+++|+++|++||+|+|+
T Consensus 163 l~~~~~~~~~~li~D~a~ 180 (359)
T 3pj0_A 163 ISEYCHEQGISLHLDGAR 180 (359)
T ss_dssp HHHHHHHHTCEEEEEETT
T ss_pred HHHHHHHcCCEEEEECcc
Confidence 99999999999999987
No 231
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=98.79 E-value=1.9e-07 Score=103.85 Aligned_cols=135 Identities=13% Similarity=0.052 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCc
Q psy852 54 SCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPF 133 (891)
Q Consensus 54 ~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~ 133 (891)
...++.+.+.+++.+..|.+.+ |+.+ .+++||+...++....+ ..
T Consensus 69 g~~~lr~~ia~~~~~~~g~~~~-------------~~~i--------------~~t~g~~~al~~~~~~l--~~------ 113 (385)
T 1b5p_A 69 GIPELREALAEKFRRENGLSVT-------------PEET--------------IVTVGGSQALFNLFQAI--LD------ 113 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCC-------------GGGE--------------EEESHHHHHHHHHHHHH--CC------
T ss_pred CCHHHHHHHHHHHHHHhCCCCC-------------hHHE--------------EEcCChHHHHHHHHHHh--cC------
Confidence 3568888889999888776432 1111 13567654322222222 11
Q ss_pred cccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC--CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc
Q psy852 134 VDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF 211 (891)
Q Consensus 134 ~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~--~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav 211 (891)
+...|+++.-+|.+...++...|.+++.|++++ ++.+|+++|++++++. +.+|+++..+|.||.+
T Consensus 114 -------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~ 180 (385)
T 1b5p_A 114 -------PGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAV 180 (385)
T ss_dssp -------TTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCC
T ss_pred -------CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCC
Confidence 122377777789999888877788999999985 4589999999888643 3466677789999998
Q ss_pred cC---HHHHHHHHHHcCCceeeeccccC
Q psy852 212 DN---LAEIGPVAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 212 Dp---l~~I~~i~~~~~~~lHvDaA~GG 236 (891)
-| +++|+++|+++|++|++|.+|+.
T Consensus 181 ~~~~~l~~i~~~~~~~~~~li~De~~~~ 208 (385)
T 1b5p_A 181 YPKEVLEALARLAVEHDFYLVSDEIYEH 208 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 55 89999999999999999999954
No 232
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=98.79 E-value=5.6e-08 Score=108.40 Aligned_cols=163 Identities=12% Similarity=-0.036 Sum_probs=108.6
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
..|.+...+...+-+.....|.......++++.+.+++.+.+|++.... +.+ .+
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~------------~~i--------------~~ 90 (410)
T 3e2y_A 37 PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPN------------EEI--------------LV 90 (410)
T ss_dssp CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTT------------TSE--------------EE
T ss_pred CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCC------------CCE--------------EE
Confidence 3455555554444332121222222357889999999999998764310 011 13
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecC-----------CCCcc
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD-----------DKNSL 177 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-----------~~g~i 177 (891)
++||+......+..+ . . +.-.|++..-+|.+....+...+.+++.++.+ .++.+
T Consensus 91 ~~g~~~a~~~~~~~~-~-~-------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~ 155 (410)
T 3e2y_A 91 AVGAYGSLFNSIQGL-V-D-------------PGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTF 155 (410)
T ss_dssp ESHHHHHHHHHHHHH-C-C-------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEEC
T ss_pred eCCcHHHHHHHHHHh-c-C-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcC
Confidence 567654332222222 1 1 11236777778888888887778899999876 35679
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccc---cCHHHHHHHHHHcCCceeeeccccCCc
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
|+++|++++++. +.+|+++..+|.+|.+ +++++|+++|+++|+++++|.+|+++.
T Consensus 156 d~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 213 (410)
T 3e2y_A 156 DPRELESKFSSK------TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLV 213 (410)
T ss_dssp CHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred CHHHHHhhcCCC------ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcc
Confidence 999999888543 4467777889999999 789999999999999999999996544
No 233
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=98.79 E-value=1.2e-07 Score=106.42 Aligned_cols=138 Identities=10% Similarity=-0.015 Sum_probs=97.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCC
Q psy852 53 PSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHP 132 (891)
Q Consensus 53 p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~ 132 (891)
+...++++.+.+++.+.+|.+.+.. +.+ .+++||+......+..+ . .
T Consensus 85 ~g~~~lr~~ia~~~~~~~g~~~~~~------------~~v--------------~~t~G~~~al~~~~~~l-~-~----- 131 (404)
T 2o1b_A 85 HGKEAFKQAIVDFYQRQYNVTLDKE------------DEV--------------CILYGTKNGLVAVPTCV-I-N----- 131 (404)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCTT------------TSE--------------EEESSHHHHHHHHHHHH-C-C-----
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCc------------ccE--------------EEcCCcHHHHHHHHHHh-c-C-----
Confidence 3567899999999999889862200 000 13567654322222222 1 1
Q ss_pred ccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCC-cccHHHHHHHHHhhhhcCCcceEEEeecccCccccc
Q psy852 133 FVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKN-SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF 211 (891)
Q Consensus 133 ~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g-~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav 211 (891)
+...|++..-+|.+...++...+.+++.++.+++| .+|+++|+++++.. +.+|+++..+|.+|.+
T Consensus 132 --------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~ 197 (404)
T 2o1b_A 132 --------PGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGST 197 (404)
T ss_dssp --------TTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCC
T ss_pred --------CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccC------ceEEEEcCCCCCCCcc
Confidence 11236777778888888887778899999998744 58999999998643 3466667788999999
Q ss_pred cC---HHHHHHHHHHcCCceeeeccccCC
Q psy852 212 DN---LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 212 Dp---l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
-| +++|+++|+++|+++++|.+|+++
T Consensus 198 ~~~~~l~~l~~~~~~~~~~li~De~~~~~ 226 (404)
T 2o1b_A 198 ATKEVFDEAIAKFKGTDTKIVHDFAYGAF 226 (404)
T ss_dssp CCHHHHHHHHHHHTTSSCEEEEECTTTTC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhc
Confidence 75 788999999999999999999653
No 234
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.79 E-value=6.5e-08 Score=110.19 Aligned_cols=170 Identities=14% Similarity=0.105 Sum_probs=95.7
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccc
Q psy852 19 RFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIED 98 (891)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~ 98 (891)
.|+++.++... |.+...+...+. .....|..++...++++ ++++++|.+.-
T Consensus 42 ~ylD~~~~~~~-~~v~~a~~~~l~-~~~~~y~~~~~~~~l~~----~la~~~~~~~v----------------------- 92 (467)
T 2oqx_A 42 VFIDLLTDSGT-GAVTQSMQAAMM-RGDEAYSGSRSYYALAE----SVKNIFGYQYT----------------------- 92 (467)
T ss_dssp CSEECSCCSSC-SCCCHHHHHHTT-SCCCCSSSCHHHHHHHH----HHHHHHCCSEE-----------------------
T ss_pred eeEecccCCCc-HHHHHHHHHHhc-cCcceeccCchhHHHHH----HHHHHhCcCcE-----------------------
Confidence 57777655444 555555554432 22223444565556654 56666665321
Q ss_pred cCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHH-HHcCCeEEEE------ec
Q psy852 99 YMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA-MMAFVRLKIL------EP 171 (891)
Q Consensus 99 ~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa-~~~~~~v~~V------~~ 171 (891)
.+++||+.+.+. .+..++..... ..|...++- |+++ ..|+....+. ...+..+... ++
T Consensus 93 --------~~t~~gt~A~~~-al~~~~~~~~~----~~G~~~~d~-Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (467)
T 2oqx_A 93 --------IPTHQGRGAEQI-YIPVLIKKREQ----EKGLDRSKM-VAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDT 157 (467)
T ss_dssp --------EEEC--CCSHHH-HHHHHHHHHHH----HHCCCTTTC-EEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCT
T ss_pred --------EEcCCcHHHHHH-HHHHHhccccc----cCCCCccce-EEec-ccccccchhhhhccCcceeeccccccccC
Confidence 135677654443 33333332000 001000012 4555 5787655444 3444444332 23
Q ss_pred C----CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcc-ccc---cCHHHHHHHHHHcCCceeeeccc
Q psy852 172 D----DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC-CSF---DNLAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 172 d----~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~-Gav---Dpl~~I~~i~~~~~~~lHvDaA~ 234 (891)
+ .+|.+|+++|+++|++.. ...+.+|+++..++.+ |.+ +++++|+++|++||++||+|+|+
T Consensus 158 ~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~ 226 (467)
T 2oqx_A 158 GVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSAR 226 (467)
T ss_dssp TSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchh
Confidence 3 457899999999998631 0124577777777777 654 67899999999999999999887
No 235
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=98.79 E-value=1.5e-07 Score=104.33 Aligned_cols=91 Identities=12% Similarity=0.018 Sum_probs=76.7
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEec--CCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc---cCHHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEP--DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGP 219 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~--d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~ 219 (891)
|++..-+|.+....+...+.+++.++. ++++.+|+++|++.+++.. ..+.+++.+..+|.+|.+ +++++|++
T Consensus 124 vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~ 200 (397)
T 3fsl_A 124 VWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQ---AGSIVLLHPCCHNPTGADLTNDQWDAVIE 200 (397)
T ss_dssp EEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCC---TTCEEEECSSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCC---CCCEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence 778888999998888878889999998 5678999999999997531 224688888899999999 66679999
Q ss_pred HHHHcCCceeeeccccCCc
Q psy852 220 VAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG~~ 238 (891)
+|+++|+++++|.+|+++.
T Consensus 201 ~~~~~~~~li~De~~~~~~ 219 (397)
T 3fsl_A 201 ILKARELIPFLDIAYQGFG 219 (397)
T ss_dssp HHHHTTCEEEEEESCTTSS
T ss_pred HHHhCCEEEEEecCchhhc
Confidence 9999999999999996644
No 236
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=98.78 E-value=1.6e-06 Score=97.94 Aligned_cols=72 Identities=17% Similarity=0.173 Sum_probs=57.2
Q ss_pred cCCeEEEEecCC-CC----cccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeecc
Q psy852 162 AFVRLKILEPDD-KN----SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGA 233 (891)
Q Consensus 162 ~~~~v~~V~~d~-~g----~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA 233 (891)
.+..++.+++|+ +| .+|+++|+++++... ..+.+|+++..+|.+|.+-| +.+|+++|+++|++||+|.+
T Consensus 171 ~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~ 247 (444)
T 3if2_A 171 VLPHIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNA 247 (444)
T ss_dssp CCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred cCceEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECC
Confidence 356788888886 44 799999999854311 12457777778999999999 88899999999999999999
Q ss_pred ccC
Q psy852 234 YAG 236 (891)
Q Consensus 234 ~GG 236 (891)
||.
T Consensus 248 ~~~ 250 (444)
T 3if2_A 248 YGM 250 (444)
T ss_dssp TCT
T ss_pred CCC
Confidence 953
No 237
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.77 E-value=6.1e-08 Score=107.96 Aligned_cols=241 Identities=8% Similarity=0.042 Sum_probs=155.0
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC--CCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~--~G~ 540 (891)
+++ +++|+++++..++.+... +.-.|+++..+|.+...++...|.+++.+|.++ ++.
T Consensus 103 ~v~--~~~g~t~al~~~~~~l~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 161 (389)
T 1o4s_A 103 QVV--VTNGAKQALFNAFMALLD-------------------PGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQ 161 (389)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTC
T ss_pred HEE--EecCHHHHHHHHHHHhCC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCC
Confidence 455 678999999988776411 122478888889999998888899999999875 568
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc-------------------CCCCc
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ-------------------GIEYA 582 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld-------------------Gi~~a 582 (891)
+|+++|+++|++.+ ..++++. ..|++. |.++ +| +....
T Consensus 162 ~d~~~l~~~l~~~~----~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~ 237 (389)
T 1o4s_A 162 PSLEEVEGLLVGKT----KAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDR 237 (389)
T ss_dssp CCHHHHHHTCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTT
T ss_pred CCHHHHHHhcccCc----eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCc
Confidence 99999999987532 1222322 245542 3321 11 11356
Q ss_pred cEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHH
Q psy852 583 DSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQK 661 (891)
Q Consensus 583 DSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~ 661 (891)
|.+..++||+++.| ..+|+++.+++ +.+.+.....+ ..++ ...+.+++++..+.. ++++
T Consensus 238 ~i~~~s~sK~~~~~G~r~G~l~~~~~--~~~~l~~~~~~-----------~~~~------~~~~~~~a~~~~l~~-~~~~ 297 (389)
T 1o4s_A 238 IVYINGFSKSHSMTGWRVGYLISSEK--VATAVSKIQSH-----------TTSC------INTVAQYAALKALEV-DNSY 297 (389)
T ss_dssp EEEEEESTTTTTCGGGCCEEEECCHH--HHHHHHHHHHH-----------HTCS------CCHHHHHHHHHHTTC-CCHH
T ss_pred EEEEeechhhcCCcccceEEEEeCHH--HHHHHHHHhhh-----------cccC------CCHHHHHHHHHHHhc-cHHH
Confidence 88999999999744 34899988543 22222110000 0000 112344555555543 3777
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeeccccCCeEE-EEe
Q psy852 662 YIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQEQNDEV-FEL 739 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~~g~~~l-~sv 739 (891)
..++..++++++.+.|++. ++++..+.....++++++ . ...++.+.|. +.|+.+..+........+ +++
T Consensus 298 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~-------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~ 368 (389)
T 1o4s_A 298 MVQTFKERKNFVVERLKKM-GVKFVEPEGAFYLFFKVR-G-------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSF 368 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCCCCCSBSSEEEEECS-S-------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhc-CCeeecCCcceEEEEeCC-C-------CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEE
Confidence 7888889999999999887 777764433345566664 2 2467888886 789876544433323466 887
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q psy852 740 QERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 740 ~~~tT~edId~li~~L~ei~ 759 (891)
+. ++++|+++++.|++.+
T Consensus 369 ~~--~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 369 AT--SIERLTEALDRIEDFL 386 (389)
T ss_dssp CS--CHHHHHHHHHHHHHHH
T ss_pred eC--CHHHHHHHHHHHHHHH
Confidence 73 8999999999988765
No 238
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=98.77 E-value=5.2e-07 Score=99.53 Aligned_cols=161 Identities=11% Similarity=0.104 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSL 109 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~ 109 (891)
.|.+...+...+-+.....|...+...+++..+.+++.+..|.+.... +.+ .++
T Consensus 40 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~------~~v--------------------~~~ 93 (376)
T 2dou_A 40 PEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPR------REA--------------------LAL 93 (376)
T ss_dssp CHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTT------TSE--------------------EEE
T ss_pred CHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------ccE--------------------EEc
Confidence 455554444433222111222223567888888888888889862210 000 135
Q ss_pred cchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhh
Q psy852 110 GGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQD 189 (891)
Q Consensus 110 ~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~ 189 (891)
+||+.........+ . . +.-.|++..-+|.+...++...|.+++.+|+++...+|+++|++.+++.
T Consensus 94 ~g~~~a~~~~~~~l-~-~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~ 158 (376)
T 2dou_A 94 IGSQEGLAHLLLAL-T-E-------------PEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWRE 158 (376)
T ss_dssp SSHHHHHHHHHHHH-C-C-------------TTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHH
T ss_pred CCcHHHHHHHHHHh-c-C-------------CCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccC
Confidence 67654322222222 1 1 1123777788899998888777889999998444569999999998643
Q ss_pred hhcCCcceEEEeecccCccccccC---HHHHHHHHHHcCCceeeeccccCC
Q psy852 190 ETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 190 ~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+.+|+++..+|.+|.+-| +++|+++|+++|+++++|.+|+++
T Consensus 159 ------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 203 (376)
T 2dou_A 159 ------AKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQ 203 (376)
T ss_dssp ------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred ------ceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhc
Confidence 346666778899999976 678889999999999999999654
No 239
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=98.77 E-value=1.8e-07 Score=104.74 Aligned_cols=248 Identities=8% Similarity=0.018 Sum_probs=154.3
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC--CCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~--~G~ 540 (891)
+++ +++|+++++..++.++.. +.-.|+++..+|.+...++...|.+++.+|.++ ++.
T Consensus 103 ~v~--~t~g~~~al~~~~~~l~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 161 (406)
T 1xi9_A 103 DVR--VTAAVTEALQLIFGALLD-------------------PGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQ 161 (406)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSE
T ss_pred HEE--EcCChHHHHHHHHHHhCC-------------------CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCc
Confidence 455 678999999988876510 122578888899999999988899999999874 567
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hcCC-----------------CCc-c
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQGI-----------------EYA-D 583 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ldGi-----------------~~a-D 583 (891)
+|+++|+++|++.+ ..++++. ..|.+. |.++ +|.+ ... |
T Consensus 162 ~d~~~l~~~l~~~~----~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 237 (406)
T 1xi9_A 162 PDIDDIRKKITDRT----KAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPV 237 (406)
T ss_dssp ECHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCE
T ss_pred CCHHHHHHhhCcCc----eEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceE
Confidence 99999999997531 1222322 345542 3331 1211 123 5
Q ss_pred EEEEcCcccCCcc-cccEEEEE-eCCc---cchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH--HH
Q psy852 584 SFNVNVNKWLLTA-FDSSCLWV-ADRY---KLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY--GL 656 (891)
Q Consensus 584 SIs~d~HK~L~~P-~g~G~llv-R~~~---~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l--G~ 656 (891)
-+..++||+++.| ..+|++++ .++. .+.+.+.....+. ++ ...+.+++....+ +.
T Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~------------~~------~~~~~~~a~~~~l~~~~ 299 (406)
T 1xi9_A 238 IVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR------------LC------PNTPAQFAAIAGLTGPM 299 (406)
T ss_dssp EEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT------------CC------SCSHHHHHHHHHHHSCC
T ss_pred EEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhh------------cC------CCHHHHHHHHHHHhCCc
Confidence 5777999999744 34899884 2330 2222221100000 01 0122333333333 34
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeE-EEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeecccc--C
Q psy852 657 SGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGL-VCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQE--Q 732 (891)
Q Consensus 657 ~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~i-V~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~~--g 732 (891)
+.+++..++..++++++.+.|++.+++++..+ ..+. +.+++... .+....++.+.|. +.|+.+..+.... +
T Consensus 300 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~ 374 (406)
T 1xi9_A 300 DYLKEYMKKLKERRDYIYKRLNEIPGISTTKP-QGAFYIFPKIEVG----PWKNDKEFVLDVLHNAHVLFVHGSGFGEYG 374 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC-CBSSEECCEECSC----SCSSHHHHHHHHHHHHCEECEEGGGGCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC-CeeEEEEEecCcc----CCCCHHHHHHHHHHhCCEEEeCchhcCCCC
Confidence 45777888889999999999999888887644 3343 33466421 0113567888886 7898755444332 2
Q ss_pred CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 733 NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 733 ~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
...+ ++++ +++++|+++++.|+++++
T Consensus 375 ~~~lRis~~--~~~~~i~~~~~~l~~~l~ 401 (406)
T 1xi9_A 375 AGHFRAVFL--PPIEILEEAMDRFEKFMK 401 (406)
T ss_dssp TTBEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 4456 8886 899999999999988763
No 240
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=98.77 E-value=2.6e-07 Score=101.12 Aligned_cols=242 Identities=8% Similarity=-0.016 Sum_probs=145.3
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHH---HHHcCceEEEecCCCCCCcCHHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA---AMMAFVRLKILEPDDKNSLRGAT 545 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Ka---a~l~gv~v~~Vp~d~~G~mD~~~ 545 (891)
.++|++++..++.+....- ++.+|+++...|++.... +.+.+++++.+|. +++.+|+++
T Consensus 68 ~~~G~~a~~~al~~~~~~g-----------------d~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~ 129 (357)
T 3lws_A 68 FPSGTMAQQVALRIWSDET-----------------DNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA-ADRLMTLDE 129 (357)
T ss_dssp ESCHHHHHHHHHHHHHHHH-----------------TCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC-TTSCCCHHH
T ss_pred ecCcHHHHHHHHHHHhhcC-----------------CCcEEEecccceeeeeccchhhhccCcEEEEecC-CCCCcCHHH
Confidence 3678899988876654311 123688888999887662 3466888888885 568899999
Q ss_pred HHHHHHhhhhcCCccEEEEec----CCccc-----------hhh-----hhcC-----------C------CCccEEEEc
Q psy852 546 LRQVMQQDETMGYIPFFVSTT----LGTTS-----------CYR-----KSQG-----------I------EYADSFNVN 588 (891)
Q Consensus 546 Le~aI~~d~~~g~ip~~Vvat----aGTT~-----------c~~-----~ldG-----------i------~~aDSIs~d 588 (891)
|+++.+ ...++++.. .|++. |.+ ++|+ . ..+|.++.+
T Consensus 130 l~~~~~------~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s 203 (357)
T 3lws_A 130 IKALPD------IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYIS 203 (357)
T ss_dssp HHTCCS------CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEE
T ss_pred HhcCcC------cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEe
Confidence 998721 223444433 25443 333 1231 1 447999999
Q ss_pred CcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHH
Q psy852 589 VNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCE 668 (891)
Q Consensus 589 ~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~ 668 (891)
+||++++|.| |+++. +++.+.........+ . .+.... ..-+......++ .+.+.+++..+
T Consensus 204 ~sK~~~~~~g-g~~~~-~~~~~~~~~~~~~~~-~-----------~~~~~~-~~~~~~~~~~l~-----~~~~~~~~~~~ 263 (357)
T 3lws_A 204 FYKGLGGIAG-AILAG-PAAFCQTARIWKRRY-G-----------GDLISL-YPYIVSADYYYE-----LRKDRMGQYYE 263 (357)
T ss_dssp SSSTTCCSSC-EEEEE-CHHHHHHHHHHHHHT-T-----------CCCSCC-HHHHHHHHHHHH-----HHTTCHHHHHH
T ss_pred ccccCCCCce-EEEEc-CHHHHHHHHHHHHHh-c-----------CCcccc-hHHHHHHHHHHH-----HHHHHHHHHHH
Confidence 9999988988 66554 443332211110000 0 000000 000111112222 23344555678
Q ss_pred HHHHHHHHhccCCCcEEe-CCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc-cCCeEE-EEecC---C
Q psy852 669 LAKLFEGKVRRDPRFEIS-NDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ-EQNDEV-FELQE---R 742 (891)
Q Consensus 669 lA~~L~~~L~~~~~~eil-~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~-~g~~~l-~sv~~---~ 742 (891)
+++++.+.|++++++++. .++..+.+++++.... ......+.+.|.++|+++..+... .+...+ ++++. .
T Consensus 264 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~ 339 (357)
T 3lws_A 264 QAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQA----ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGE 339 (357)
T ss_dssp HHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCH----HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGG
T ss_pred HHHHHHHHHHhCCCCeeccCCCcceEEEEEecCCh----HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhh
Confidence 899999999999999984 6677889999986431 123567888898899874433221 233355 77664 3
Q ss_pred CCHHHHHHHHHHHHHH
Q psy852 743 KRKDDLAYKRSFFVRM 758 (891)
Q Consensus 743 tT~edId~li~~L~ei 758 (891)
.+.++++++++.|.+.
T Consensus 340 ~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 340 LDQQTRDAGFARLRQA 355 (357)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHh
Confidence 6888888888877654
No 241
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=98.77 E-value=9.9e-08 Score=105.18 Aligned_cols=88 Identities=10% Similarity=0.076 Sum_probs=74.1
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCC--CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~--~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~ 218 (891)
.|++...+|.+...++...|.+++.++++. .+.+|+++|++++++. +.+|+++..+|.+|.+-| +++|+
T Consensus 107 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~ 180 (375)
T 3op7_A 107 HVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELV 180 (375)
T ss_dssp EEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 477788899998888877788999999874 4558999999998743 346677788899999999 99999
Q ss_pred HHHHHcCCceeeeccccCC
Q psy852 219 PVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG~ 237 (891)
++|+++|+++++|.+|+++
T Consensus 181 ~la~~~~~~li~De~~~~~ 199 (375)
T 3op7_A 181 EIASEVGAYILSDEVYRSF 199 (375)
T ss_dssp HHHHTTTCEEEEECCSCCC
T ss_pred HHHHHcCCEEEEEcccccc
Confidence 9999999999999999653
No 242
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=98.77 E-value=2.5e-07 Score=101.88 Aligned_cols=262 Identities=7% Similarity=-0.003 Sum_probs=161.0
Q ss_pred HHHHHHHhhc--cCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 448 LAKLFEGKVR--RDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 448 lAr~l~~~L~--~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
+++++.+... ..+. +++ +++|+++++..++.+... +.-.|++..-+|.+...++..
T Consensus 68 l~~~l~~~~g~~~~~~-~v~--~~~g~~~a~~~~~~~l~~-------------------~gd~vl~~~~~~~~~~~~~~~ 125 (383)
T 3kax_A 68 ICNWTKKQYNWDIQKE-WIV--FSAGIVPALSTSIQAFTK-------------------ENESVLVQPPIYPPFFEMVTT 125 (383)
T ss_dssp HHHHHHHHHCCCCCGG-GEE--EESCHHHHHHHHHHHHCC-------------------TTCEEEECSSCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCChh-hEE--EcCCHHHHHHHHHHHhCC-------------------CCCEEEEcCCCcHHHHHHHHH
Confidence 4445555443 1222 556 788999999888766411 122588888999999999998
Q ss_pred cCceEEEecCCCC---CCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hcCC----
Q psy852 526 AFVRLKILEPDDK---NSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQGI---- 579 (891)
Q Consensus 526 ~gv~v~~Vp~d~~---G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ldGi---- 579 (891)
.|.+++.+|.+.+ +.+|+++|+++|+.++ ..++++. ..|++. |.++ +|.+
T Consensus 126 ~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~----~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 201 (383)
T 3kax_A 126 NNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGV----KLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDI 201 (383)
T ss_dssp TTCEEEECCCEEETTEEECCHHHHHHHHTTTC----CEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred cCCEEEeccceecCCcEEEcHHHHHHHhCcCC----eEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEcccccc
Confidence 9999999998643 4599999999994322 1223322 245443 3331 1211
Q ss_pred -----------C------CccEEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc
Q psy852 580 -----------E------YADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR 641 (891)
Q Consensus 580 -----------~------~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr 641 (891)
. ..+-+..+.||+++ ....+|+++..+++...........+ +.. .
T Consensus 202 ~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~--------------~~~---~ 264 (383)
T 3kax_A 202 IYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQ--------------GFH---G 264 (383)
T ss_dssp BCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHT--------------TCC---C
T ss_pred ccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhc--------------ccC---C
Confidence 0 12266788999998 44678888875543322111000000 000 0
Q ss_pred ccchHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH
Q psy852 642 FRSLKLWFVIRTY--GLSGLQKYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN 718 (891)
Q Consensus 642 ~~aL~lW~~L~~l--G~~G~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~ 718 (891)
...+.+++....+ +.+.+.+..++..++++++.+.|++ ++++++..+.....+++.++.. .....++.+.|.
T Consensus 265 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~ 339 (383)
T 3kax_A 265 LNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSAL-----NLSQDERTKLLE 339 (383)
T ss_dssp CCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGG-----CCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEcccc-----CCCHHHHHHHHH
Confidence 1122333333333 2344777778888999999999988 7899887554444445666532 124567888887
Q ss_pred -hCCcEEEeecccc--CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 719 -ASGRLHMVPASQE--QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 719 -~~G~~~~s~s~~~--g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.|+.+..+.... +...+ ++++ +++++|+++++.|++++
T Consensus 340 ~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 340 EKGKIIVEPGEKYGLGGEEHIGINIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp HTSCEECEESGGGCTTCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred hhCCEEeECchhhcCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence 6788755544332 34566 8876 58999999999998764
No 243
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=98.76 E-value=2e-07 Score=103.68 Aligned_cols=82 Identities=9% Similarity=0.024 Sum_probs=60.1
Q ss_pred EEEecCCCChHHHHHHHHcCCe------------EEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVR------------LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF 211 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~------------v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav 211 (891)
+|+.+..-|.+...++.+.+.+ +..++. .|+++|++++++. +.+|+++..++.+|.+
T Consensus 133 vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~ 201 (395)
T 1vef_A 133 FVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEE------TAAVILEPVQGEGGVR 201 (395)
T ss_dssp EEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTT------EEEEEECSEETTTTSE
T ss_pred EEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccC------EEEEEEeCccCCCCcc
Confidence 4555555566666566554432 334432 4899999988643 4577777778889998
Q ss_pred cC----HHHHHHHHHHcCCceeeeccccC
Q psy852 212 DN----LAEIGPVAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 212 Dp----l~~I~~i~~~~~~~lHvDaA~GG 236 (891)
.| +++|+++|+++|++|++|.|++|
T Consensus 202 ~~~~~~l~~i~~l~~~~~~~li~Dea~~~ 230 (395)
T 1vef_A 202 PATPEFLRAAREITQEKGALLILDEIQTG 230 (395)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEecccC
Confidence 77 99999999999999999999976
No 244
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.76 E-value=9.7e-07 Score=97.36 Aligned_cols=236 Identities=8% Similarity=-0.019 Sum_probs=152.4
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.++++.+|
T Consensus 94 ~v~--~~~G~~~al~~~~~~l~~-------------------~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d 152 (369)
T 3cq5_A 94 NLW--AANGSNEILQQLLQAFGG-------------------PGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRID 152 (369)
T ss_dssp GEE--EESHHHHHHHHHHHHHCS-------------------TTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCC
T ss_pred hEE--ECCChHHHHHHHHHHhcC-------------------CCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCC
Confidence 455 678888988777655311 11247888888999998888889999999998888999
Q ss_pred HHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhh-----hhcC--------------CCC---ccEEEEcC
Q psy852 543 GATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYR-----KSQG--------------IEY---ADSFNVNV 589 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~-----~ldG--------------i~~---aDSIs~d~ 589 (891)
+++|++++++. ....+++.. ..|... |.. .+|. .+. .+-+..++
T Consensus 153 ~~~l~~~i~~~---~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 229 (369)
T 3cq5_A 153 MDVALEEIRAK---QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTM 229 (369)
T ss_dssp HHHHHHHHHHH---CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEES
T ss_pred HHHHHHHhhcc---CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEec
Confidence 99999999862 111223332 234443 111 0110 111 34778899
Q ss_pred cccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH-hhHHHHHHHHH
Q psy852 590 NKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL-SGLQKYIRRHC 667 (891)
Q Consensus 590 HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~-~G~~~~i~~~~ 667 (891)
||+++.| ..+|+++.+++ +.+.+..... .++ ...+.++++...+.. +.+.+..++..
T Consensus 230 sK~~~~~G~r~G~~~~~~~--~~~~l~~~~~-------------~~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~ 288 (369)
T 3cq5_A 230 SKAFDFAGGRLGYFVANPA--FIDAVMLVRL-------------PYH------LSALSQAAAIVALRHSADTLGTVEKLS 288 (369)
T ss_dssp SSTTSCGGGCCEEEEECTH--HHHHHHTTSC-------------TTC------SCHHHHHHHHHHHHTHHHHHTHHHHHH
T ss_pred hHhcCCcccceEEEEeCHH--HHHHHHHcCC-------------CCC------CCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999755 45799988643 2222221100 011 123344444444432 34667777888
Q ss_pred HHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHH
Q psy852 668 ELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKD 746 (891)
Q Consensus 668 ~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~e 746 (891)
++++++.+.|++ .++++. ++..+.++|++. . ...++.+.|.+.|+.+..+ .....+ ++++ +++
T Consensus 289 ~~~~~l~~~L~~-~g~~~~-~~~~~~~~~~~~-~-------~~~~l~~~l~~~gi~v~~~---~~~~~iRis~~---~~~ 352 (369)
T 3cq5_A 289 VERVRVAARLEE-LGYAVV-PSESNFVFFGDF-S-------DQHAAWQAFLDRGVLIRDV---GIAGHLRTTIG---VPE 352 (369)
T ss_dssp HHHHHHHHHHHH-HTCEEE-CCSSSEEEEECC-S-------SHHHHHHHHHHTTEECBCC---SCTTEEEEECC---CHH
T ss_pred HHHHHHHHHHHh-CCCEEC-CCCCeEEEEECC-C-------CHHHHHHHHHHCCEEEEEC---CCCCeEEEEeC---CHH
Confidence 899999999987 478876 455678888774 2 2457888888889774333 223456 8876 789
Q ss_pred HHHHHHHHHHHHH
Q psy852 747 DLAYKRSFFVRML 759 (891)
Q Consensus 747 dId~li~~L~ei~ 759 (891)
|+++++++|+++.
T Consensus 353 ~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 353 ENDAFLDAAAEII 365 (369)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998775
No 245
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.76 E-value=5e-07 Score=102.61 Aligned_cols=267 Identities=14% Similarity=0.138 Sum_probs=154.1
Q ss_pred HHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccch-HHHHHHHHHcCc
Q psy852 450 KLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAH-SCVEKAAMMAFV 528 (891)
Q Consensus 450 r~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH-~Sv~Kaa~l~gv 528 (891)
+.+++.+.. + +++ +++||++++..++.++.. . ++ +++..+| .+...++...|.
T Consensus 82 ~~la~~~~~-~--~~~--~~~~gt~a~~~al~~l~~--------------~----gd---i~~~~~~~~~~~~~~~~~G~ 135 (456)
T 2ez2_A 82 RTVQELFGF-K--HIV--PTHQGRGAENLLSQLAIK--------------P----GQ---YVAGNMYFTTTRYHQEKNGA 135 (456)
T ss_dssp HHHHHHHCC-S--EEE--EESSHHHHHHHHHHHHCC--------------T----TC---EEEESSCCHHHHHHHHHTTC
T ss_pred HHHHHHhCC-C--cEE--EeCCcHHHHHHHHHHhCC--------------C----CC---EeccccccchhHHHHHHcCC
Confidence 344445543 2 345 678999999988866511 1 22 4455566 787888888899
Q ss_pred eEEEecCCC----------CCCcCHHHHHHHHHhhhhcCCccEEEEe-----cCCccc-----------hhhh-------
Q psy852 529 RLKILEPDD----------KNSLRGATLRQVMQQDETMGYIPFFVST-----TLGTTS-----------CYRK------- 575 (891)
Q Consensus 529 ~v~~Vp~d~----------~G~mD~~~Le~aI~~d~~~g~ip~~Vva-----taGTT~-----------c~~~------- 575 (891)
+++.+|+++ ++.+|+++|+++|++.+. ..+.++++. ..|.+. |.++
T Consensus 136 ~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~-~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~D 214 (456)
T 2ez2_A 136 VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA-ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYD 214 (456)
T ss_dssp EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG-GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEecccccccccccccccCCCCHHHHHHHHHhccc-cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 999998863 278999999999987532 122233322 345432 3321
Q ss_pred -----------------hcCC----------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCC
Q psy852 576 -----------------SQGI----------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGA 628 (891)
Q Consensus 576 -----------------ldGi----------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~ 628 (891)
..|. ...|.+++++||+++.| ..|+++.++++...........+.....
T Consensus 215 e~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~--- 290 (456)
T 2ez2_A 215 ATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELVVVYEGMPS--- 290 (456)
T ss_dssp CTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHHHHHTCCTT---
T ss_pred ccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHHhhccCccc---
Confidence 1222 23689999999998866 4577776555433221111111100000
Q ss_pred ccccCCcccccccccchHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecC--Ccchh
Q psy852 629 IDYRHWGIPLSRRFRSLKLWFVIRTYGLSGL-QKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRS--ENNLI 705 (891)
Q Consensus 629 ~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~-~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~--~~~~~ 705 (891)
. .+.. ++ ++. .+++..+ +.+ .+.+++..++++++.+.|++. +++++.+.....+.+.+.. .+ ..
T Consensus 291 --~--~~~~-~~---~~~-a~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~~~~~~~~-~~ 357 (456)
T 2ez2_A 291 --Y--GGLA-GR---DME-AMAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFCEH-LT 357 (456)
T ss_dssp --T--TTCC-HH---HHH-HHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEEHHHHTTT-SC
T ss_pred --c--cCcc-hh---HHH-HHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEhHHhcCC-CC
Confidence 0 0010 11 111 0011111 223 466677788889999999884 7777665555677777631 11 01
Q ss_pred hhhh-HHHHHHHH-HhCCcEEEe-eccc------------cCCeEE-EEecCC-CCHHHHHHHHHHHHHHHH
Q psy852 706 ADQN-NRKLLEDI-NASGRLHMV-PASQ------------EQNDEV-FELQER-KRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 706 ~d~l-n~~L~~~L-~~~G~~~~s-~s~~------------~g~~~l-~sv~~~-tT~edId~li~~L~ei~~ 760 (891)
.+.+ .+.+...| .+.|+..+. +... .+...+ ++++.. ++++||+++++.|++++.
T Consensus 358 ~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~ 429 (456)
T 2ez2_A 358 QDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQ 429 (456)
T ss_dssp GGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred hhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 1233 56667777 577886433 2211 123566 988776 899999999999998763
No 246
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=98.76 E-value=4.5e-07 Score=99.17 Aligned_cols=243 Identities=9% Similarity=0.019 Sum_probs=145.3
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH---HHcCceEEEecCCCCCCcCHHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA---MMAFVRLKILEPDDKNSLRGAT 545 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa---~l~gv~v~~Vp~d~~G~mD~~~ 545 (891)
.+||++++..++.++...- ++.+|+++...|++..... .+.|.+++.+|. +++.+|+++
T Consensus 69 ~~~g~~a~~~a~~~~~~~g-----------------~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~d~~~ 130 (359)
T 3pj0_A 69 FPSGTMAQQIALRIWADRK-----------------ENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT-ANQLLTIDD 130 (359)
T ss_dssp ESCHHHHHHHHHHHHHHHH-----------------TCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC-TTSCCCHHH
T ss_pred eCCHHHHHHHHHHHHHhcC-----------------CCcEEEEeccceeeehhcchHHHhcCceEEecCC-cCCCcCHHH
Confidence 4678899988877754321 2335778888888775432 456889999988 578999999
Q ss_pred HHHHHHhhhhcCCccEEEEec---C-Cccc-----------hhhh-----hcC-----------C------CCccEEEEc
Q psy852 546 LRQVMQQDETMGYIPFFVSTT---L-GTTS-----------CYRK-----SQG-----------I------EYADSFNVN 588 (891)
Q Consensus 546 Le~aI~~d~~~g~ip~~Vvat---a-GTT~-----------c~~~-----ldG-----------i------~~aDSIs~d 588 (891)
|+++ .+ ....+++++. . |++. |.++ +|+ . ..+|.++++
T Consensus 131 l~~~-~~----~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s 205 (359)
T 3pj0_A 131 IKSL-RE----PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVS 205 (359)
T ss_dssp HHTC-SS----CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEE
T ss_pred HHhc-cC----CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEe
Confidence 9987 22 2223444332 2 4442 3331 232 1 346999999
Q ss_pred CcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHH
Q psy852 589 VNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCE 668 (891)
Q Consensus 589 ~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~ 668 (891)
+||++++|.| |+ ++.+++.+.........+ .. +.. +-...+...+..++. ..+.+++..+
T Consensus 206 ~sK~~~~~~g-g~-~~~~~~l~~~~~~~~~~~--~~----------~~~-~~~~~~~a~~~~l~~-----~~~~~~~~~~ 265 (359)
T 3pj0_A 206 FYKGIGGIAG-AI-LAGNDDFVQEAKIWKRRY--GG----------DLI-SLYPYILSADYYFEK-----RIGKMAEYFE 265 (359)
T ss_dssp SSSTTCCSSC-EE-EEECHHHHHHHHHHHHHT--TC----------CCS-CCHHHHHHHHHHHHH-----HGGGHHHHHH
T ss_pred ccccCCCcce-EE-EECCHHHHHHHHHHHHHh--CC----------Ccc-hhHHHHHHHHHHHHH-----HHHHhHHHHH
Confidence 9999999966 44 444443332211100000 00 000 000011111122222 1245666788
Q ss_pred HHHHHHHHhccCCCcEEe-CCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc--ccCCeEE-EEecC---
Q psy852 669 LAKLFEGKVRRDPRFEIS-NDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS--QEQNDEV-FELQE--- 741 (891)
Q Consensus 669 lA~~L~~~L~~~~~~eil-~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~--~~g~~~l-~sv~~--- 741 (891)
+++++.+.|++++++++. .++..+.+.+++.... ....+.+.+.|.+.|+.+..+.. ..+...+ ++++.
T Consensus 266 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~ 341 (359)
T 3pj0_A 266 AAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA----DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFA 341 (359)
T ss_dssp HHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH----HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGG
T ss_pred HHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc----chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccc
Confidence 899999999999999985 5667888888886431 12356788889999987543322 2233455 76653
Q ss_pred CCCHHHHHHHHHHHHHH
Q psy852 742 RKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 742 ~tT~edId~li~~L~ei 758 (891)
..+.+++++.++.|.+.
T Consensus 342 ~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 342 EIPAKNLELVFRCLEKE 358 (359)
T ss_dssp GSCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhc
Confidence 35788888888877653
No 247
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=98.76 E-value=4.5e-07 Score=99.55 Aligned_cols=247 Identities=11% Similarity=0.056 Sum_probs=158.6
Q ss_pred HHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceE
Q psy852 451 LFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRL 530 (891)
Q Consensus 451 ~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v 530 (891)
.+++.+...+. +++ +++|+++++..++.+... +.-.|+++.-.|.+...++...|.++
T Consensus 73 ~la~~~~~~~~-~v~--~~~g~~~a~~~~~~~l~~-------------------~gd~vl~~~~~~~~~~~~~~~~g~~~ 130 (365)
T 3get_A 73 TLAQKYKVQNE-NII--IGAGSDQVIEFAIHSKLN-------------------SKNAFLQAGVTFAMYEIYAKQCGAKC 130 (365)
T ss_dssp HHHHHHTCCGG-GEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEECSSCCTHHHHHHHHHTCEE
T ss_pred HHHHHhCCCcc-eEE--ECCCHHHHHHHHHHHHhC-------------------CCCEEEEeCCChHHHHHHHHHcCCEE
Confidence 34444443223 556 788999999887765311 12247788889999999998889999
Q ss_pred EEecC-CCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhh----hh-----------cC--
Q psy852 531 KILEP-DDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYR----KS-----------QG-- 578 (891)
Q Consensus 531 ~~Vp~-d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~----~l-----------dG-- 578 (891)
+.+|. ++++ +|+++|++++++++ ..++++ +..|+.. |.+ .+ .+
T Consensus 131 ~~v~~~~~~~-~d~~~l~~~l~~~~----~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~ 205 (365)
T 3get_A 131 YKTQSITHNL-DEFKKLYETHKDEI----KLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKK 205 (365)
T ss_dssp EECSSSSCCH-HHHHHHHHHTTTTE----EEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGG
T ss_pred EEEecCCCCC-CCHHHHHHHhCCCC----CEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcc
Confidence 99998 7778 99999999997432 122332 2245543 211 01 11
Q ss_pred -C--------CCccEEEEcCcccCC-cccccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccccccccchHH
Q psy852 579 -I--------EYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKL 647 (891)
Q Consensus 579 -i--------~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~l 647 (891)
. ...+-+..++||+++ ....+|+++. +++.. +.+. ....| + ...+.+
T Consensus 206 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~-~~~~~~~~~~--------------~------~~~~~~ 263 (365)
T 3get_A 206 HLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANII-SAFYKLRAPF--------------N------VSNLAL 263 (365)
T ss_dssp CCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHH-HHHHHHSCTT--------------C------SCHHHH
T ss_pred cccHhHHhccCCCEEEEeecchHhcCcchheEEEEc-CHHHH-HHHHHhcCCC--------------C------cCHHHH
Confidence 1 122466779999987 4467899888 33322 2221 11111 1 112233
Q ss_pred HHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe
Q psy852 648 WFVIRTYG-LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV 726 (891)
Q Consensus 648 W~~L~~lG-~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s 726 (891)
++....+. .+.+.+..++..++++++.+.|++. ++++. ++..+.+++++++. ....+.+.|.++|+.+..
T Consensus 264 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~ 334 (365)
T 3get_A 264 KAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKII-DSYTNFITYFFDEK-------NSTDLSEKLLKKGIIIRN 334 (365)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECSSS-------CHHHHHHHHHTTTEECEE
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECCCC-------CHHHHHHHHHHCCEEEEE
Confidence 33333332 2567788888899999999999987 78775 34556678887532 456788889999987655
Q ss_pred eccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 727 PASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 727 ~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.... ...+ ++++ +++|+++++++|+++.
T Consensus 335 g~~~~-~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 335 LKSYG-LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp CGGGT-CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred CccCC-CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 54443 4566 8876 8999999999998764
No 248
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=98.76 E-value=1.1e-07 Score=106.80 Aligned_cols=250 Identities=14% Similarity=0.035 Sum_probs=155.7
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH----
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA---- 523 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa---- 523 (891)
+.+.+++.+... +++ +++||++++..++.++.. +.-.|+++...|.+....+
T Consensus 71 l~~~la~~~g~~---~~~--~~~sGt~A~~~al~~~~~-------------------~gd~Vi~~~~~y~~~~~~~~~~~ 126 (392)
T 3qhx_A 71 LEAALAAVEDAA---FGR--AFSSGMAAADCALRAMLR-------------------PGDHVVIPDDAYGGTFRLIDKVF 126 (392)
T ss_dssp HHHHHHHHTTCS---EEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEETTCCHHHHHHHHHTG
T ss_pred HHHHHHHHhCCC---cEE--EECCHHHHHHHHHHHHhC-------------------CCCEEEEeCCCcchHHHHHHHHH
Confidence 334455555432 344 567889999988876411 1225888888988777666
Q ss_pred HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCC--------
Q psy852 524 MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGI-------- 579 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi-------- 579 (891)
...|++++.+|.+ |+++|+++|+++++ .+++. +..|... |+++ +|.+
T Consensus 127 ~~~g~~~~~v~~~-----d~~~l~~~i~~~~~----~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~ 197 (392)
T 3qhx_A 127 TGWNVEYTPVALA-----DLDAVRAAIRPTTR----LIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQ 197 (392)
T ss_dssp GGGTCEEEEECTT-----CHHHHHHHCCTTEE----EEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC
T ss_pred HhcCcEEEEeCCC-----CHHHHHHhhCCCCe----EEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 3457899999886 89999999976321 22222 2344443 4432 2321
Q ss_pred ---CCccEEEEcCcccCCcccc--cEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH
Q psy852 580 ---EYADSFNVNVNKWLLTAFD--SSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY 654 (891)
Q Consensus 580 ---~~aDSIs~d~HK~L~~P~g--~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l 654 (891)
-.+|.++.+.||+++.|.+ .|+++.+++..... +... . ...+.....+..|..++
T Consensus 198 ~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~-l~~~----~-------------~~~g~~~~~~~~~~~~~-- 257 (392)
T 3qhx_A 198 PLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQS-FAFL----Q-------------NGAGAVPGPFDAYLTMR-- 257 (392)
T ss_dssp GGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHH-HHHH----H-------------HHHCCCCCHHHHHHHHH--
T ss_pred hHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHH-HHHH----H-------------HhcCCCCCHHHHHHHHh--
Confidence 2479999999999997753 78877775433221 1100 0 00011223455666655
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc-----------------eeEEEEEecCCcchhhhhhHHHHHHHH
Q psy852 655 GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR-----------------LGLVCFRLRSENNLIADQNNRKLLEDI 717 (891)
Q Consensus 655 G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~-----------------~~iV~Fr~~~~~~~~~d~ln~~L~~~L 717 (891)
+.+.+...+++..++++++.+.|++.+.+.-+..|. .++++|.+++. ....+.+.+.|
T Consensus 258 ~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~-----~~~~~~~~~~l 332 (392)
T 3qhx_A 258 GLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAG-----RTAAEQLCAKT 332 (392)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTC-----HHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCc-----HHHHHHHHHhC
Confidence 455577888889999999999999988875442221 46899999753 23556777777
Q ss_pred HhCCcEEEeecc---------c-----------cCCeEE-EEecCCCCHHHHHHHHHHH
Q psy852 718 NASGRLHMVPAS---------Q-----------EQNDEV-FELQERKRKDDLAYKRSFF 755 (891)
Q Consensus 718 ~~~G~~~~s~s~---------~-----------~g~~~l-~sv~~~tT~edId~li~~L 755 (891)
...|+....+.. . .....+ +|++..+++++|+.+.++|
T Consensus 333 ~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 333 NIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp SSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 665544222211 0 124567 9999888888888777665
No 249
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.75 E-value=2e-08 Score=113.05 Aligned_cols=80 Identities=15% Similarity=0.126 Sum_probs=64.8
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.++...+ ...|.+++.|+++ | ++|++++++. +.+|+++..+|.+|.+.|+++|++
T Consensus 95 ~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~ 162 (393)
T 1n8p_A 95 HAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL-----L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVAD 162 (393)
T ss_dssp EEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH-----H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC-----h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHH
Confidence 3777778888776654 2346788899876 7 8888887643 458888999999999999999999
Q ss_pred HHHHc----CCceeeecccc
Q psy852 220 VAKEF----DVWLHVDGAYA 235 (891)
Q Consensus 220 i~~~~----~~~lHvDaA~G 235 (891)
+|+++ |+++|+|+||+
T Consensus 163 la~~~~~~~~~~livD~a~~ 182 (393)
T 1n8p_A 163 LIKKHAAGQDVILVVDNTFL 182 (393)
T ss_dssp HHHHHTTTTTCEEEEECTTT
T ss_pred HHHHhCCCCCCEEEEeCCcc
Confidence 99999 99999999883
No 250
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=98.75 E-value=9.3e-07 Score=98.55 Aligned_cols=262 Identities=7% Similarity=-0.029 Sum_probs=149.7
Q ss_pred HHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHH---HHHHc-
Q psy852 451 LFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK---AAMMA- 526 (891)
Q Consensus 451 ~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~K---aa~l~- 526 (891)
.+++.+...+ -+|+ +++| ++++..++.+... +.-.|+++..+|.+... .....
T Consensus 79 ~la~~~g~~~-~~i~--~~sG-t~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~~~~g 135 (417)
T 3n0l_A 79 RCKKLFNCKF-ANVQ--PNSG-SQANQGVYAALIN-------------------PGDKILGMDLSHGGHLTHGAKVSSSG 135 (417)
T ss_dssp HHHHHHTCSE-EECC--CSSH-HHHHHHHHHHHSC-------------------TTCEEEEECC----------------
T ss_pred HHHHHhCCCC-cceE--eccH-HHHHHHHHHHhcC-------------------CCCEEEecccccccccchhhhhhhhc
Confidence 3444444322 2354 4555 8998888766411 12247777777876654 22232
Q ss_pred -CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE-ecCCccc--------hhhh-----hcC-------------
Q psy852 527 -FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS-TTLGTTS--------CYRK-----SQG------------- 578 (891)
Q Consensus 527 -gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv-ataGTT~--------c~~~-----ldG------------- 578 (891)
++.++.+++++++.+|+++|+++|++.. ...++++ .+.|+.. |.++ +|.
T Consensus 136 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~---~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~ 212 (417)
T 3n0l_A 136 KMYESCFYGVELDGRIDYEKVREIAKKEK---PKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHP 212 (417)
T ss_dssp CCSEEEEECCCTTSSCCHHHHHHHHHHHC---CSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC
T ss_pred ceeeeEeccCCCCCCcCHHHHHHHHHhcC---CeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCC
Confidence 3467778888889999999999998431 1122222 2346554 4431 222
Q ss_pred --CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccchHHHHHHHHHH
Q psy852 579 --IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRTYG 655 (891)
Q Consensus 579 --i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~lG 655 (891)
+..+|.++.++||++.+|.+ |+++.+++......-.....+. .++-. .....++.++....
T Consensus 213 ~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~aa~~~a~~~~~ 276 (417)
T 3n0l_A 213 SPFPYAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSAIFPGI---------------QGGPLMHVIAAKAVGFKFNL 276 (417)
T ss_dssp CCTTTCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHHHTTTT---------------CSSCCHHHHHHHHHHHHHHT
T ss_pred CccccceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhhhCCcc---------------cCCcHHHHHHHHHHHHHHHH
Confidence 23469999999999988874 7877765433221111100000 00111 11233445555545
Q ss_pred HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCC-CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc-----
Q psy852 656 LSGLQKYIRRHCELAKLFEGKVRRDPRFEISND-VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS----- 729 (891)
Q Consensus 656 ~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~----- 729 (891)
..++.+..++..++++++.+.|++ .++++... ...+.+.+.+.+. ......+.+.|.+.|+.......
T Consensus 277 ~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~v~~~~~~~~~~ 350 (417)
T 3n0l_A 277 SDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDR-----EFSGKDADLALGNAGITANKNTVPGEIR 350 (417)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTS-----SSCHHHHHHHHHHTTEECEECCCTTCCS
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccC-----CCCHHHHHHHHHHcCeEEeccccCCCCc
Confidence 577888899999999999999988 67887652 3456777777543 12345677788888987432211
Q ss_pred -ccCCeEE-EEec----CCCCHHHHHHHHHHHHHHHH
Q psy852 730 -QEQNDEV-FELQ----ERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 730 -~~g~~~l-~sv~----~~tT~edId~li~~L~ei~~ 760 (891)
......+ +++. ...+++||+++++.|++++.
T Consensus 351 ~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~ 387 (417)
T 3n0l_A 351 SPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILD 387 (417)
T ss_dssp CTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 0112234 6643 24789999999999998763
No 251
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.75 E-value=4.7e-07 Score=101.96 Aligned_cols=254 Identities=9% Similarity=-0.001 Sum_probs=154.1
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH-HcCceEEEecCCC--CC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM-MAFVRLKILEPDD--KN 539 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~-l~gv~v~~Vp~d~--~G 539 (891)
.|+ +++|+++++..++.+... +.-.|+++.-+|.+...++. ..|++++.+|.++ ++
T Consensus 110 ~i~--~~~G~~~ai~~~~~~~~~-------------------~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~ 168 (428)
T 1iay_A 110 RVV--MAGGATGANETIIFCLAD-------------------PGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNF 168 (428)
T ss_dssp SCE--EEEHHHHHHHHHHHHHCC-------------------TTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTT
T ss_pred hEE--EccChHHHHHHHHHHhCC-------------------CCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCC
Confidence 455 678889999888776431 11247777788888777553 6788999999864 45
Q ss_pred CcCHHHHHHHHHhhhhcCC-ccEEEEec----CCccc-----------hhhh--------------hcCC---------C
Q psy852 540 SLRGATLRQVMQQDETMGY-IPFFVSTT----LGTTS-----------CYRK--------------SQGI---------E 580 (891)
Q Consensus 540 ~mD~~~Le~aI~~d~~~g~-ip~~Vvat----aGTT~-----------c~~~--------------ldGi---------~ 580 (891)
.+|+++|+++|++....+. +-++++.+ .|++. |.++ ..+- .
T Consensus 169 ~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~ 248 (428)
T 1iay_A 169 KITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILD 248 (428)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHT
T ss_pred cCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhcc
Confidence 7999999999986433332 22222222 45443 3221 1110 1
Q ss_pred C-------cc--EEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 581 Y-------AD--SFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 581 ~-------aD--SIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
. .| -+..+.||+++.| ..+|+++..++..+. .+.....+ ++ ...+.+.+.
T Consensus 249 ~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~-~~~~~~~~-------------~~------~~~~~~~a~ 308 (428)
T 1iay_A 249 EQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVN-CARKMSSF-------------GL------VSTQTQYFL 308 (428)
T ss_dssp SGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHH-HHHHHHTT-------------SC------CCHHHHHHH
T ss_pred ccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHH-HHHHHHhc-------------cc------CCHHHHHHH
Confidence 1 47 5688999999755 457999886554332 22110000 00 012223333
Q ss_pred HHHHHH-----hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhC-CcEE
Q psy852 651 IRTYGL-----SGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINAS-GRLH 724 (891)
Q Consensus 651 L~~lG~-----~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~~ 724 (891)
...+.. +.+++..++..+++++|.+.|++. ++++..+...+.+++++.+.....-......+.+.|.++ |+.+
T Consensus 309 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v 387 (428)
T 1iay_A 309 AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNV 387 (428)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEEC
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEE
Confidence 333322 245667777788999999999887 677654435567788875321000002345788888876 9875
Q ss_pred Eeecccc--CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 725 MVPASQE--QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 725 ~s~s~~~--g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
..+.... +..++ ++++ .+++++++++++.|++++
T Consensus 388 ~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l 424 (428)
T 1iay_A 388 SPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFV 424 (428)
T ss_dssp EEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHH
T ss_pred eCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHH
Confidence 5444332 23566 9887 579999999999998775
No 252
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=98.74 E-value=4.4e-08 Score=110.29 Aligned_cols=265 Identities=7% Similarity=0.012 Sum_probs=158.5
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC-CCc
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-NSL 541 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~-G~m 541 (891)
+|+ +++|+++++..++.+... .. .| .+..|+++.-.|.+...++...|.+++.+|.+++ +.+
T Consensus 107 ~i~--~t~g~t~al~~~~~~l~~-----~~-------~g---d~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 169 (437)
T 3g0t_A 107 ACV--PTVGSMQGCFVSFLVANR-----TH-------KN---REYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEK 169 (437)
T ss_dssp GEE--EESHHHHHHHHHHHHHTT-----SC-------TT---CSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTH
T ss_pred cEE--EeCCHHHHHHHHHHHHhc-----CC-------CC---CccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCcc
Confidence 566 788999999888776530 00 01 1114778888999999999888999999998644 479
Q ss_pred CHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hcC------------C-----------
Q psy852 542 RGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQG------------I----------- 579 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ldG------------i----------- 579 (891)
|+++|+++|+.. +...++++ +..|++. |.++ +|. +
T Consensus 170 d~~~l~~~l~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
T 3g0t_A 170 LREKLESYLQTG---QFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVA 246 (437)
T ss_dssp HHHHHHHHHTTT---CCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGG
T ss_pred CHHHHHHHHhcC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccC
Confidence 999999999432 11122232 2345543 3321 111 1
Q ss_pred --CCccEEEEcCcccCC-cccccEEEEEeCCccchhhhc-cCCCccccCCCCCcc-ccCCcccccccccchHHHHHHHHH
Q psy852 580 --EYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAID-YRHWGIPLSRRFRSLKLWFVIRTY 654 (891)
Q Consensus 580 --~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~-~~~~ti~~SRr~~aL~lW~~L~~l 654 (891)
...+.+..+.||+++ ....+|+++.+++ .+...+. ....+..... ... +........-....+.++++...+
T Consensus 247 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~l 323 (437)
T 3g0t_A 247 NYTDNYILALSSSKAFSYAGQRIGVLMISGK-LYEREYPDLEESFGRLRF--GEALSSSALYALSSGATHSAQWGMAAML 323 (437)
T ss_dssp GTCSCEEEEEESTTTTSCGGGCCEEEEECHH-HHHCBCGGGHHHHSCSBH--HHHHHTTHHHHHHSSSCHHHHHHHHHHH
T ss_pred CCCCcEEEEEcCccCCCCccceeEEEEECHH-Hhhhhhhcccccccccch--hHHHHHHHHhhhcCCCCHHHHHHHHHHH
Confidence 223366789999997 4466899988643 1110100 0000000000 000 000000000011234445555555
Q ss_pred HHhh-----HHHHHHHHHHHHHHHHHHhccCCCcEEe------CC-CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCc
Q psy852 655 GLSG-----LQKYIRRHCELAKLFEGKVRRDPRFEIS------ND-VRLGLVCFRLRSENNLIADQNNRKLLEDINASGR 722 (891)
Q Consensus 655 G~~G-----~~~~i~~~~~lA~~L~~~L~~~~~~eil------~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~ 722 (891)
.... +.+..++..++++++.+.|++. ++++. .+ .....+++++.+. ....+.+.|.++|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~gi 395 (437)
T 3g0t_A 324 KACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGM-------DSSKLIEKFVRYGM 395 (437)
T ss_dssp HHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETTC-------CHHHHHHHHHHTTE
T ss_pred hCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCCC-------CHHHHHHHHHHcCe
Confidence 4332 7888889999999999999998 88887 34 4556778888632 35678889998998
Q ss_pred EEEeeccccCC--eEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 723 LHMVPASQEQN--DEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 723 ~~~s~s~~~g~--~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.+..+...... ..+ ++++ ..+++||+++++.|++++
T Consensus 396 ~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~~ 434 (437)
T 3g0t_A 396 CAITLKTTGSKRNEAMRICTS-LLPESQFPDLEKRLQMLN 434 (437)
T ss_dssp ECEESTTTTCCCTTCEEEECS-SSCGGGHHHHHHHHHHHH
T ss_pred EEeeccccCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHH
Confidence 75544332211 446 9888 449999999999998875
No 253
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=98.74 E-value=9.2e-08 Score=107.20 Aligned_cols=163 Identities=13% Similarity=0.080 Sum_probs=108.8
Q ss_pred CHHHHHHHHHHHhcCCC-CCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCC
Q psy852 29 SYPSVLADMLSDAIGCI-GFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQ 107 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~ 107 (891)
..|.+...+...+-... ...|.......++...+.+++++.+|++.... +.+ .
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~------------~~i--------------~ 95 (422)
T 3fvs_A 42 PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPL------------RNV--------------L 95 (422)
T ss_dssp CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHH------------HHE--------------E
T ss_pred CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCC------------CcE--------------E
Confidence 34555555444433322 12222223456889999999999999763210 001 1
Q ss_pred cccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCC----CC--------
Q psy852 108 SLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD----KN-------- 175 (891)
Q Consensus 108 ~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~----~g-------- 175 (891)
+++||+...+..+..+ . . +.-.|++..-+|.+....+...+.+++.++.+. +|
T Consensus 96 ~~~g~~~a~~~~~~~~-~-~-------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~ 160 (422)
T 3fvs_A 96 VTVGGYGALFTAFQAL-V-D-------------EGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNW 160 (422)
T ss_dssp EESHHHHHHHHHHHHH-C-C-------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGS
T ss_pred EECChHHHHHHHHHHH-c-C-------------CCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCC
Confidence 3567764333222222 1 1 112367777788888888877788999999886 44
Q ss_pred cccHHHHHHHHHhhhhcCCcceEEEeecccCcccccc---CHHHHHHHHHHcCCceeeeccccCCc
Q psy852 176 SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFD---NLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 176 ~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavD---pl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
.+|+++|++.+++. +.+|+++..+|.+|.+- ++++|+++|+++|+++++|.+|+++.
T Consensus 161 ~~d~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 220 (422)
T 3fvs_A 161 QLDPMELAGKFTSR------TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMV 220 (422)
T ss_dssp BCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred CCCHHHHHhhcCCC------ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhc
Confidence 79999999988653 34677778899999998 59999999999999999999996543
No 254
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=98.74 E-value=9.4e-08 Score=109.23 Aligned_cols=88 Identities=11% Similarity=0.121 Sum_probs=71.5
Q ss_pred EEEecC-CCChHHHHHHHH----------cCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeec----ccCcc
Q psy852 144 MAYCSK-EAHSCVEKAAMM----------AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTL----GTTSC 208 (891)
Q Consensus 144 ~v~~S~-~~H~Sv~kaa~~----------~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~----Gtt~~ 208 (891)
.|+++. ..|.+....+.+ .+.+++.++.+++|.+|+++|++++++. +.+|+++. .++.+
T Consensus 109 ~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~ 182 (431)
T 3ht4_A 109 ELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPS 182 (431)
T ss_dssp EEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCC
T ss_pred EEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCc
Confidence 366665 778887766532 4679999999999999999999998754 34666665 78889
Q ss_pred ccccCHHHHHHHHHH--cCCceeeeccccCC
Q psy852 209 CSFDNLAEIGPVAKE--FDVWLHVDGAYAGS 237 (891)
Q Consensus 209 GavDpl~~I~~i~~~--~~~~lHvDaA~GG~ 237 (891)
|.++|+++|+++|++ +|+++++|.||+.+
T Consensus 183 ~~~~~l~~i~~la~~~~~~~~livDea~~~~ 213 (431)
T 3ht4_A 183 FTISQIKEMIAFVKEIKPDVVVFVDNCYGEF 213 (431)
T ss_dssp CCHHHHHHHHHHHHHHCTTCEEEEECTTCTT
T ss_pred CCHHHHHHHHHHHHhhCCCCEEEEeCCChhh
Confidence 999999999999999 99999999988543
No 255
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=98.74 E-value=7.1e-07 Score=103.65 Aligned_cols=270 Identities=9% Similarity=0.001 Sum_probs=147.3
Q ss_pred HHHHhhccCCc-cccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchH------HHHH--
Q psy852 451 LFEGKVRRDPR-FEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHS------CVEK-- 521 (891)
Q Consensus 451 ~l~~~L~~~~~-~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~------Sv~K-- 521 (891)
++++.+...+. +.+.. ++++|+++|+.++.+.-. +.-.|+++..+|. ++..
T Consensus 108 ~~a~l~g~~~~~~~~~v-~~~sGt~An~~al~al~~-------------------pGD~Vl~~~~~h~g~l~h~~~~~~~ 167 (490)
T 2a7v_A 108 RALEAFDLDPAQWGVNV-QPYSGSPANLAVYTALLQ-------------------PHDRIMGLDLPDGGHLTHGYMSDVK 167 (490)
T ss_dssp HHHHHTTCCTTTEEEEC-CCSSHHHHHHHHHHHHCC-------------------SCEECCC------------------
T ss_pred HHHHHcCCCcccCceEE-eCCchHHHHHHHHHHHcC-------------------CCCEecccCccccccccchhhhcch
Confidence 55555554332 21111 345789999988876311 1123555554443 3221
Q ss_pred HHHHcCce--EEEecCC-CCCCcCHHHHHHHHHhhhhcCCccEEEEe-cCCccc--------hhh-----hhcC------
Q psy852 522 AAMMAFVR--LKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVST-TLGTTS--------CYR-----KSQG------ 578 (891)
Q Consensus 522 aa~l~gv~--v~~Vp~d-~~G~mD~~~Le~aI~~d~~~g~ip~~Vva-taGTT~--------c~~-----~ldG------ 578 (891)
.+.+.+.. ++.+++| ++|.+|+++|++++.+... ..+++.. ..|+.. |++ ++|+
T Consensus 168 ~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~---klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~gl 244 (490)
T 2a7v_A 168 RISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRP---RLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGL 244 (490)
T ss_dssp -------------CCBCTTTCSBCHHHHHHHHHHHCC---SEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHH
T ss_pred hHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCC---cEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEcccccccc
Confidence 22344443 3445555 5799999999999975321 1122222 234332 333 1222
Q ss_pred ---------CCCccEEEEcCcccCCcccccEEEEEeCCc-------------cchhhhccCCCccccCCCCCccccCCcc
Q psy852 579 ---------IEYADSFNVNVNKWLLTAFDSSCLWVADRY-------------KLTSALVVDPLYLQHGHEGAIDYRHWGI 636 (891)
Q Consensus 579 ---------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~-------------~L~~~l~~~~~Yl~~~~e~~~~~~~~ti 636 (891)
++.+|.+++++||++.+|.| |++++++.. .+.+.+.. .+. .+.
T Consensus 245 v~~g~~~~~~~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~~-----------~g~ 309 (490)
T 2a7v_A 245 VAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINF---AVF-----------PSL 309 (490)
T ss_dssp HHTTSSCCGGGTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHHH---HHT-----------TTT
T ss_pred ccCCcCCCCCCCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHHH---Hhc-----------ccC
Confidence 24689999999999999987 888888751 11111110 000 011
Q ss_pred ccccccc-chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCC-CceeEEEEEecCCcchhhhhhHHHHH
Q psy852 637 PLSRRFR-SLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND-VRLGLVCFRLRSENNLIADQNNRKLL 714 (891)
Q Consensus 637 ~~SRr~~-aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~ 714 (891)
+++-... ...+..+++..-.+.+.+..++..+++++|.+.|++. +++++.. .+.+++.+.+.+. ......+.
T Consensus 310 qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~-----g~~~~~~~ 383 (490)
T 2a7v_A 310 QGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPK-----GLDGARAE 383 (490)
T ss_dssp CCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTT-----TCCHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCC-----CCCHHHHH
Confidence 1121111 1223334444444567888899999999999999985 8998753 4567888887643 12345677
Q ss_pred HHHHhCCcEEEeecccc-----CCeEE-EE----ecCCCCHHHHHHHHHHHHHHHHHHHH
Q psy852 715 EDINASGRLHMVPASQE-----QNDEV-FE----LQERKRKDDLAYKRSFFVRMLGLVCF 764 (891)
Q Consensus 715 ~~L~~~G~~~~s~s~~~-----g~~~l-~s----v~~~tT~edId~li~~L~ei~~~~~~ 764 (891)
+.|.+.|+.....+... ...-+ ++ .+...+++|++++++.|.+++....+
T Consensus 384 ~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~~~ 443 (490)
T 2a7v_A 384 RVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLE 443 (490)
T ss_dssp HHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhhhh
Confidence 88888898744321111 12234 64 35578999999999999998865443
No 256
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=98.73 E-value=4.9e-07 Score=99.63 Aligned_cols=237 Identities=10% Similarity=0.039 Sum_probs=151.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+... . ++-.|+++.-+|.+...++...|.+++.+|.++++.+|
T Consensus 77 ~v~--~~~G~~~ai~~~~~~~~~----~--------------g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d 136 (356)
T 1fg7_A 77 QVL--VSRGADEGIELLIRAFCE----P--------------GKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLD 136 (356)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC----T--------------TTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCC
T ss_pred HEE--EcCCHHHHHHHHHHHHhC----C--------------CCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 455 678999999887766421 0 11247777888888888888889999999998888999
Q ss_pred HHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhh----hhcC----------C------CCccEEEEc
Q psy852 543 GATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYR----KSQG----------I------EYADSFNVN 588 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~----~ldG----------i------~~aDSIs~d 588 (891)
+++|+++++ ++ ..++++. ..|+.. |.. .+|. + ...+-+..+
T Consensus 137 ~~~l~~~i~-~~----~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s 211 (356)
T 1fg7_A 137 LQGISDKLD-GV----KVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRT 211 (356)
T ss_dssp HHHHHTSCT-TE----EEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEE
T ss_pred HHHHHHHhc-CC----CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEec
Confidence 999998885 21 1233332 245443 211 0111 0 123566779
Q ss_pred CcccCCcc-cccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhh---HHHHH
Q psy852 589 VNKWLLTA-FDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSG---LQKYI 663 (891)
Q Consensus 589 ~HK~L~~P-~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G---~~~~i 663 (891)
.||+++.| ..+|+++.++ +.+ +.+. ....| + ...+.++++...+...+ +++..
T Consensus 212 ~sK~~g~~G~r~G~~~~~~-~~~-~~l~~~~~~~--------------~------~~~~~~~a~~~~l~~~~~~~~~~~~ 269 (356)
T 1fg7_A 212 LSKAFALAGLRCGFTLANE-EVI-NLLMKVIAPY--------------P------LSTPVADIAAQALSPQGIVAMRERV 269 (356)
T ss_dssp SSSTTCCGGGCCEEEEECH-HHH-HHHHHHSCSS--------------C------SCHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred chHhhcCchhhhEEEEeCH-HHH-HHHHHhcCCC--------------C------CCHHHHHHHHHHhcCccHHHHHHHH
Confidence 99998744 4579888843 222 2221 11111 1 12344555555554444 67777
Q ss_pred HHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe-eccccCCeEE-EEecC
Q psy852 664 RRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV-PASQEQNDEV-FELQE 741 (891)
Q Consensus 664 ~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s-~s~~~g~~~l-~sv~~ 741 (891)
++..++++++.+.|++.+++....+...+.+.+++. ...++.+.|.+.|+.+.. +.......++ ++++
T Consensus 270 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~- 339 (356)
T 1fg7_A 270 AQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK---------ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG- 339 (356)
T ss_dssp HHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET---------THHHHHHHHHHTTEECEECTTSTTCTTEEEEECC-
T ss_pred HHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC---------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC-
Confidence 888899999999999887654444556677788874 245788888888987554 3322223456 8876
Q ss_pred CCCHHHHHHHHHHHHHH
Q psy852 742 RKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 742 ~tT~edId~li~~L~ei 758 (891)
+++|+++++++|+++
T Consensus 340 --~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 340 --TREESQRVIDALRAE 354 (356)
T ss_dssp --CHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHHHhh
Confidence 689999999988753
No 257
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=98.73 E-value=3.6e-07 Score=101.88 Aligned_cols=248 Identities=8% Similarity=-0.014 Sum_probs=143.4
Q ss_pred CCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHH-H--HHc--CceEEEecCCCCCCcCHH
Q psy852 470 SSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA-A--MMA--FVRLKILEPDDKNSLRGA 544 (891)
Q Consensus 470 sggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Ka-a--~l~--gv~v~~Vp~d~~G~mD~~ 544 (891)
++|++++..++.+... +.-.|+++...|.+.... . .+. ++..+.+|.+.++.+|++
T Consensus 99 ~sGs~a~~~a~~~~~~-------------------~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 159 (420)
T 3gbx_A 99 HSGSQANFAVYTALLQ-------------------PGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYD 159 (420)
T ss_dssp SSHHHHHHHHHHHHCC-------------------TTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHH
T ss_pred cCcHHHHHHHHHHhcC-------------------CCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHH
Confidence 3458888887655311 123577778888774422 2 222 345666778888999999
Q ss_pred HHHHHHHhhhhcCCccEEE-EecCCccc--------hhhh-----hcC---------------CCCccEEEEcCcccCCc
Q psy852 545 TLRQVMQQDETMGYIPFFV-STTLGTTS--------CYRK-----SQG---------------IEYADSFNVNVNKWLLT 595 (891)
Q Consensus 545 ~Le~aI~~d~~~g~ip~~V-vataGTT~--------c~~~-----ldG---------------i~~aDSIs~d~HK~L~~ 595 (891)
+|+++|++.. ...+++ ..+.|+.. |.++ +|. ++.+|.++.++||++++
T Consensus 160 ~l~~~i~~~~---~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g 236 (420)
T 3gbx_A 160 EMAKLAKEHK---PKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAG 236 (420)
T ss_dssp HHHHHHHHHC---CSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCS
T ss_pred HHHHHHHhcC---CeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCC
Confidence 9999998741 112233 22334433 4431 111 34478999999999988
Q ss_pred ccccEEEEEeCC-ccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy852 596 AFDSSCLWVADR-YKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFE 674 (891)
Q Consensus 596 P~g~G~llvR~~-~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~ 674 (891)
|.| |+++.++. ..+.+.+.. +.... ..+ ..-......++.++.....+++.+..++..++++++.
T Consensus 237 ~~g-g~~~~~~~~~~~~~~~~~---~~~~~--------~~~--~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 302 (420)
T 3gbx_A 237 PRG-GLILAKGGDEELYKKLNS---AVFPS--------AQG--GPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMV 302 (420)
T ss_dssp CSC-EEEEESSCCHHHHHHHHH---HHC------------C--CCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCc-eEEEEcCCcHHHHHHhhh---hcCCC--------CCC--CcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Confidence 876 77766652 112222110 00000 000 0001112234445544445678888999999999999
Q ss_pred HHhccCCCcEEeCC-CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEee------ccccCCeEE-EEecC----C
Q psy852 675 GKVRRDPRFEISND-VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVP------ASQEQNDEV-FELQE----R 742 (891)
Q Consensus 675 ~~L~~~~~~eil~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~------s~~~g~~~l-~sv~~----~ 742 (891)
+.|++ .+++++.+ ...+.+.+.+.+. ......+.+.|.+.|+.+... ....+...+ +++.. .
T Consensus 303 ~~L~~-~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~ 376 (420)
T 3gbx_A 303 EVFLN-RGYKVVSGGTENHLFLLDLVDK-----NLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRG 376 (420)
T ss_dssp HHHHH-TTCEEGGGSCSSSEEEEECGGG-----TCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred HHHHh-cCCeeccCCCCCeEEEEEcCCC-----CCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccC
Confidence 99988 57888753 3566777777542 123456777888889875431 111122235 77543 4
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy852 743 KRKDDLAYKRSFFVRML 759 (891)
Q Consensus 743 tT~edId~li~~L~ei~ 759 (891)
.++++|+++++.|++++
T Consensus 377 ~~~~~i~~~~~~l~~~l 393 (420)
T 3gbx_A 377 FKEAEVKELAGWMCDVL 393 (420)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 67999999999998776
No 258
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.73 E-value=2.4e-07 Score=104.55 Aligned_cols=250 Identities=7% Similarity=-0.008 Sum_probs=155.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.+++| +|
T Consensus 111 ~v~--~t~G~~~al~~~~~~l~~-------------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d 168 (425)
T 1vp4_A 111 NLI--FTVGSQQALDLIGKLFLD-------------------DESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDG-MD 168 (425)
T ss_dssp GEE--EEEHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-EC
T ss_pred cEE--EeccHHHHHHHHHHHhCC-------------------CCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCC-CC
Confidence 455 778999998877765311 11247777788989988888889999999988776 99
Q ss_pred HHHHHHHHHhhhhc--C-CccEE-EEe----cCCccc-----------hhhh-----hc---------CC----------
Q psy852 543 GATLRQVMQQDETM--G-YIPFF-VST----TLGTTS-----------CYRK-----SQ---------GI---------- 579 (891)
Q Consensus 543 ~~~Le~aI~~d~~~--g-~ip~~-Vva----taGTT~-----------c~~~-----ld---------Gi---------- 579 (891)
+++|+++|++..++ + .+-++ ++. ..|++. |.++ +| |-
T Consensus 169 ~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 248 (425)
T 1vp4_A 169 LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGG 248 (425)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHC
T ss_pred HHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCC
Confidence 99999999863211 0 11122 332 245543 3331 11 10
Q ss_pred CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH---
Q psy852 580 EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL--- 656 (891)
Q Consensus 580 ~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~--- 656 (891)
...+-+..+.+|+++.-..+|+++.+++ +.+.+...... ..++ ...+.++++...+..
T Consensus 249 ~~~~i~~~s~sK~~~~G~r~G~~~~~~~--~~~~l~~~~~~-----------~~~~------~~~~~~~a~~~~l~~~~~ 309 (425)
T 1vp4_A 249 PERVVLLNTFSKVLAPGLRIGMVAGSKE--FIRKIVQAKQS-----------ADLC------SPAITHRLAARYLERYDL 309 (425)
T ss_dssp TTTEEEEEESTTTTCGGGCEEEEECCHH--HHHHHHHHHHH-----------HHSS------CCHHHHHHHHHHHHHSCH
T ss_pred CCCEEEEeccccccccccceEEEeeCHH--HHHHHHHHhhh-----------hcCC------CCHHHHHHHHHHHhcCCH
Confidence 1124557789999993245799988633 22222110000 0011 123445555555543
Q ss_pred -hhHHHHHHHHHHHHHHHHHHhccC-C---CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc-
Q psy852 657 -SGLQKYIRRHCELAKLFEGKVRRD-P---RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ- 730 (891)
Q Consensus 657 -~G~~~~i~~~~~lA~~L~~~L~~~-~---~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~- 730 (891)
+.+++..++..++++++.+.|++. + ++++..+...+.++++++.. ....++.+.|.++|+.+..+...
T Consensus 310 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~------~~~~~l~~~l~~~gi~v~~g~~f~ 383 (425)
T 1vp4_A 310 LEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEG------FDTWEMFEYAKRKKVFYVPGRVFK 383 (425)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTT------CCTTTTHHHHHHHTEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCC------CCHHHHHHHHHHCCCEEECchhhc
Confidence 345566666678889999999874 5 68877655566888888531 12345777787789876544433
Q ss_pred ---cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 ---EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 ---~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+...+ ++++.. ++++|+++++.|++++.
T Consensus 384 ~~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~ 416 (425)
T 1vp4_A 384 VYDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVL 416 (425)
T ss_dssp TTCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHH
Confidence 134567 988764 89999999999998764
No 259
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.72 E-value=1.1e-07 Score=108.44 Aligned_cols=88 Identities=7% Similarity=0.023 Sum_probs=72.8
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCC------------CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDD------------KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF 211 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~------------~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav 211 (891)
.|++..-.|.+...++...|.+++.|++++ ++.+|+++|++++++. +.+|+++..+|.+|.+
T Consensus 144 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~ 217 (447)
T 3b46_A 144 EVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAVIINTPHNPIGKV 217 (447)
T ss_dssp EEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEEEEESSCTTTCCC
T ss_pred EEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEEEEeCCCCCCCcc
Confidence 367777788888888877788999999865 3589999999988633 3466777889999998
Q ss_pred ---cCHHHHHHHHHHcCCceeeeccccCC
Q psy852 212 ---DNLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 212 ---Dpl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+++++|+++|+++|+++++|.+|+++
T Consensus 218 ~~~~~l~~i~~l~~~~~~~li~De~~~~~ 246 (447)
T 3b46_A 218 FTREELTTLGNICVKHNVVIISDEVYEHL 246 (447)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTC
T ss_pred cCHHHHHHHHHHHHHcCcEEEEeccchhc
Confidence 67999999999999999999999653
No 260
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.72 E-value=7.5e-07 Score=101.37 Aligned_cols=277 Identities=9% Similarity=0.051 Sum_probs=148.2
Q ss_pred HHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH-HHcC
Q psy852 449 AKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA-MMAF 527 (891)
Q Consensus 449 Ar~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa-~l~g 527 (891)
.+.+++.+.. + +++ +++||+++|..++.+++...... .|...++- |+++ ..|+....+. ...+
T Consensus 80 ~~~la~~~~~-~--~v~--~t~~gt~A~~~al~~~~~~~~~~---------~G~~~~d~-Ii~~-~~h~~t~~~~~~~~~ 143 (467)
T 2oqx_A 80 AESVKNIFGY-Q--YTI--PTHQGRGAEQIYIPVLIKKREQE---------KGLDRSKM-VAFS-NYFFDTTQGHSQING 143 (467)
T ss_dssp HHHHHHHHCC-S--EEE--EEC--CCSHHHHHHHHHHHHHHH---------HCCCTTTC-EEEE-SSCCHHHHHHHHHTT
T ss_pred HHHHHHHhCc-C--cEE--EcCCcHHHHHHHHHHHhcccccc---------CCCCccce-EEec-ccccccchhhhhccC
Confidence 3445555543 2 345 67899999999999987531111 01000012 4555 5785543333 3444
Q ss_pred ceEEEe------cCC----CCCCcCHHHHHHHHHhhhhcCCccEEEEe---cC-Cccc-----------hhh-----hhc
Q psy852 528 VRLKIL------EPD----DKNSLRGATLRQVMQQDETMGYIPFFVST---TL-GTTS-----------CYR-----KSQ 577 (891)
Q Consensus 528 v~v~~V------p~d----~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---ta-GTT~-----------c~~-----~ld 577 (891)
..+... +.+ .+|.+|+++|+++|++........++++. .. |.+. |.+ +.|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D 223 (467)
T 2oqx_A 144 CTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMD 223 (467)
T ss_dssp CEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 444332 233 45789999999999863100112233332 22 4431 443 234
Q ss_pred -------------------CC----------CCccEEEEcCcccCCcccccEEEEEeCC---ccchhhhccCCCccccCC
Q psy852 578 -------------------GI----------EYADSFNVNVNKWLLTAFDSSCLWVADR---YKLTSALVVDPLYLQHGH 625 (891)
Q Consensus 578 -------------------Gi----------~~aDSIs~d~HK~L~~P~g~G~llvR~~---~~L~~~l~~~~~Yl~~~~ 625 (891)
|. +.+|.+++++||+++.|.| |+++.++. +.+.. +. .+.....
T Consensus 224 ~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~-~~---~~~~~~~ 298 (467)
T 2oqx_A 224 SARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTE-CR---TLCVVQE 298 (467)
T ss_dssp CTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHH-HH---HHHHHTT
T ss_pred chhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHH-HH---HhhhccC
Confidence 22 3478999999999998865 55555544 12211 11 0100000
Q ss_pred CCCccccCCcccccccccchHHHHHHHHHH-HhhH-HHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecC--C
Q psy852 626 EGAIDYRHWGIPLSRRFRSLKLWFVIRTYG-LSGL-QKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRS--E 701 (891)
Q Consensus 626 e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG-~~G~-~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~--~ 701 (891)
. ...++ +....++ . ++. .+ .+.+ .+.+++..++++++.+.|++. ++++. +.....++|.+.+ .
T Consensus 299 -~---~~~~~---~~~~~~~--~-al~-~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~ 365 (467)
T 2oqx_A 299 -G---FPTYG---GLEGGAM--E-RLA-VGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLP 365 (467)
T ss_dssp -S---SCCCC---CCCHHHH--H-HHH-HHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHST
T ss_pred -C---ccccc---chhhhHH--H-HHH-HhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcc
Confidence 0 00001 1111111 1 121 11 1112 235566678889999999887 77777 5556677888742 1
Q ss_pred cchhhhhh-HHHHHHHH-HhCCcEEEeeccc-----c--------CCeEE-EEecCC-CCHHHHHHHHHHHHHHHH
Q psy852 702 NNLIADQN-NRKLLEDI-NASGRLHMVPASQ-----E--------QNDEV-FELQER-KRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 702 ~~~~~d~l-n~~L~~~L-~~~G~~~~s~s~~-----~--------g~~~l-~sv~~~-tT~edId~li~~L~ei~~ 760 (891)
+. .-+.. ...+.+.| .+.|+.+..+..+ . +...+ ++++.. +|++||+++++.|++++.
T Consensus 366 ~~-~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~ 440 (467)
T 2oqx_A 366 HI-PADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_dssp TS-CGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHH
T ss_pred cC-CcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence 10 01223 56788888 7889875532221 0 12567 988888 999999999999998763
No 261
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=98.72 E-value=2.7e-07 Score=101.57 Aligned_cols=87 Identities=9% Similarity=0.033 Sum_probs=65.7
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEecCCCCcccH-HHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRG-ATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPV 220 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~-~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i 220 (891)
|++..-+|.+...++...+.+++.++.+.++.+++ +++.+.+.+ .+.+|+++..+|.+|.+-| +++|+++
T Consensus 101 vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~ 174 (364)
T 1lc5_A 101 AMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTP------DLDCLFLCTPNNPTGLLPERPLLQAIADR 174 (364)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhccC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 66667788998888877788999999886333553 444443321 1345666777999999998 8999999
Q ss_pred HHHcCCceeeeccccCC
Q psy852 221 AKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 221 ~~~~~~~lHvDaA~GG~ 237 (891)
|+++|+++++|.+|+++
T Consensus 175 ~~~~~~~li~De~~~~~ 191 (364)
T 1lc5_A 175 CKSLNINLILDEAFIDF 191 (364)
T ss_dssp HHHHTCEEEEECTTGGG
T ss_pred hhhcCcEEEEECcChhh
Confidence 99999999999999543
No 262
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.71 E-value=5.1e-07 Score=101.03 Aligned_cols=254 Identities=9% Similarity=-0.027 Sum_probs=156.5
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC--CC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK--NS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~--G~ 540 (891)
+|+ +++|+++++..++.+... +.-.|+++.-+|.+...++...|.+++.+|.+++ +.
T Consensus 106 ~v~--~~~g~~~al~~~~~~l~~-------------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 164 (416)
T 1bw0_A 106 NVV--LCSGGSHGILMAITAICD-------------------AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWE 164 (416)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTE
T ss_pred eEE--EeCChHHHHHHHHHHhCC-------------------CCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCC
Confidence 455 678999999888766411 1124777778888888888888999999998653 67
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEec----CCccc-----------hhhh-----h---------cCC---------CC-
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVSTT----LGTTS-----------CYRK-----S---------QGI---------EY- 581 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vvat----aGTT~-----------c~~~-----l---------dGi---------~~- 581 (891)
+|+++|++++++.+ .++++.+ .|++. |.++ + .|- ..
T Consensus 165 ~d~~~l~~~l~~~~-----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 239 (416)
T 1bw0_A 165 ADLDEIRRLKDDKT-----KLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF 239 (416)
T ss_dssp ECHHHHHHHCCTTE-----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS
T ss_pred CCHHHHHHHhccCC-----eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHc
Confidence 99999999987532 2233322 34432 3321 1 111 00
Q ss_pred ---c-cEEEEcCcccCCcc-cccEEEEEeCC-ccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH-
Q psy852 582 ---A-DSFNVNVNKWLLTA-FDSSCLWVADR-YKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY- 654 (891)
Q Consensus 582 ---a-DSIs~d~HK~L~~P-~g~G~llvR~~-~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l- 654 (891)
. +-+..++||+++.| ..+|+++.+++ ..+.........+.. ..++ ...+.+++....+
T Consensus 240 ~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~---------~~~~------~~~~~~~a~~~~l~ 304 (416)
T 1bw0_A 240 ETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGM---------LVCG------PCTVVQAALGEALL 304 (416)
T ss_dssp CCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHH---------HHTC------SCHHHHHHHHHHHH
T ss_pred cCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhc---------cccC------CCcHHHHHHHHHHh
Confidence 1 23456899998777 56899998875 332211100000000 0011 1122333333333
Q ss_pred --HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHH-HhCCcEEEeecccc
Q psy852 655 --GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDI-NASGRLHMVPASQE 731 (891)
Q Consensus 655 --G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L-~~~G~~~~s~s~~~ 731 (891)
+.+.+++..++..++++++.+.|++.+++++..+...+.+.+++....-.. ......+.+.| .+.|+.+..+....
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~ 383 (416)
T 1bw0_A 305 NTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRD-IKTDVEFFEKLLEEENVQVLPGTIFH 383 (416)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSS-CCSHHHHHHHHHHHHCEECEEGGGGT
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCC-CCCHHHHHHHHHHHCCEEEecccccC
Confidence 356788888899999999999999988888775544566777774210000 01346777877 47898866555444
Q ss_pred CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
....+ ++++ +++++|+++++.|.+.+.
T Consensus 384 ~~~~iRis~~--~~~e~l~~~l~~l~~~l~ 411 (416)
T 1bw0_A 384 APGFTRLTTT--RPVEVYREAVERIKAFCQ 411 (416)
T ss_dssp CTTEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 34566 8884 689999999999987763
No 263
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.71 E-value=6e-07 Score=100.21 Aligned_cols=249 Identities=9% Similarity=0.000 Sum_probs=144.0
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH-HHHHHH--HcCc--eEEEecCC-CCCCc
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC-VEKAAM--MAFV--RLKILEPD-DKNSL 541 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S-v~Kaa~--l~gv--~v~~Vp~d-~~G~m 541 (891)
+++||++++..++.++.. +.-.|+++..+|.+ +...+. +.+. +.+.++.+ +++.+
T Consensus 99 ~~~~Gs~a~~~al~~~~~-------------------~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 159 (425)
T 3ecd_A 99 QPHSGAQANGAVMLALAK-------------------PGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLI 159 (425)
T ss_dssp CCSSHHHHHHHHHHHHCC-------------------TTCEEEEECC------------------CEEEEECCCTTTSSC
T ss_pred ecCchHHHHHHHHHHccC-------------------CCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCcc
Confidence 367889998887765410 12247777888877 323333 3343 55566766 45899
Q ss_pred CHHHHHHHHHhhhhcCCccEEEE-ecCCccc--------hhhh-----hcC---------------CCCccEEEEcCccc
Q psy852 542 RGATLRQVMQQDETMGYIPFFVS-TTLGTTS--------CYRK-----SQG---------------IEYADSFNVNVNKW 592 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vv-ataGTT~--------c~~~-----ldG---------------i~~aDSIs~d~HK~ 592 (891)
|+++|+++|.+.. ...++++ .+.|+.. |.++ +|. ++.+|.++.++||+
T Consensus 160 d~~~l~~~i~~~~---~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~ 236 (425)
T 3ecd_A 160 DYDQVEALAQQHK---PSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKT 236 (425)
T ss_dssp CHHHHHHHHHHHC---CSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGG
T ss_pred CHHHHHHHHhhcC---CcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcc
Confidence 9999999997531 1233333 3345443 4331 111 23479999999999
Q ss_pred CCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccc-cccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy852 593 LLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSR-RFRSLKLWFVIRTYGLSGLQKYIRRHCELAK 671 (891)
Q Consensus 593 L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SR-r~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~ 671 (891)
+.+|. .|+++.+++... +.+.. +...+ ..++- ......++.++.....+++.+..++..++++
T Consensus 237 l~g~~-~g~~~~~~~~~~-~~~~~---~~~~~-----------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 300 (425)
T 3ecd_A 237 LRGPR-GGFVLTNDEEIA-KKINS---AVFPG-----------LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQ 300 (425)
T ss_dssp GCCCS-CEEEEESCHHHH-HHHHH---HHC----------------CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred cCCCC-cEEEEeCCHHHH-HHHHh---hhCcc-----------ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 98776 477777654322 21111 00000 00010 1122344555555555778888999999999
Q ss_pred HHHHHhccCCCcEEeCC-CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec------cccCCeEE-EEe----
Q psy852 672 LFEGKVRRDPRFEISND-VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA------SQEQNDEV-FEL---- 739 (891)
Q Consensus 672 ~L~~~L~~~~~~eil~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s------~~~g~~~l-~sv---- 739 (891)
++.+.|++ .++++..+ ...+++.+.+.+. ....+.+.+.|.+.|+.+.... .......+ +++
T Consensus 301 ~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~ 374 (425)
T 3ecd_A 301 ALGDVLKA-GGVDLVTGGTDNHLLLVDLRPK-----GLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGT 374 (425)
T ss_dssp HHHHHHHH-TTCEEGGGSCSSSEEEEECGGG-----TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHH
T ss_pred HHHHHHHh-CCCeeccCCCCceEEEEEeCCC-----CCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhhe
Confidence 99999988 47888753 3567788877542 1234577788888898754322 01112345 773
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q psy852 740 QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 740 ~~~tT~edId~li~~L~ei~~ 760 (891)
....++++|+++++.|++++.
T Consensus 375 ~~~~~~e~i~~~~~~l~~~l~ 395 (425)
T 3ecd_A 375 TRGFGAAEFREVGRLILEVFE 395 (425)
T ss_dssp HTTCCHHHHHHHHHHHHHHHH
T ss_pred eccCCHHHHHHHHHHHHHHHh
Confidence 335579999999999998874
No 264
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=98.71 E-value=3.1e-07 Score=104.91 Aligned_cols=71 Identities=18% Similarity=0.209 Sum_probs=57.9
Q ss_pred HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeec----ccCccccccCHHHHHHHHHH--cCCceeeecc
Q psy852 160 MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTL----GTTSCCSFDNLAEIGPVAKE--FDVWLHVDGA 233 (891)
Q Consensus 160 ~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~----Gtt~~GavDpl~~I~~i~~~--~~~~lHvDaA 233 (891)
...|.+++.|+. ++|.+|+++|++++++. ..|-+|+++. .++.+|.+.|+++|+++|++ +|+++++|.|
T Consensus 146 ~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a 220 (427)
T 3hvy_A 146 REYGVKYKMVDL-KDGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNC 220 (427)
T ss_dssp GGGTCEEEECCC-BTTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECT
T ss_pred HHcCCEEEEecC-CCCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 335778999998 78999999999999841 0134666666 78999999999999999999 7888888888
Q ss_pred cc
Q psy852 234 YA 235 (891)
Q Consensus 234 ~G 235 (891)
++
T Consensus 221 ~~ 222 (427)
T 3hvy_A 221 YG 222 (427)
T ss_dssp TC
T ss_pred cc
Confidence 74
No 265
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=98.71 E-value=3.7e-07 Score=102.84 Aligned_cols=91 Identities=14% Similarity=-0.018 Sum_probs=76.4
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEec--CCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc---cCHHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEP--DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGP 219 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~--d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~ 219 (891)
|+++.-+|.+....+...+.+++.++. ++++.+|+++|++.+++.. ..+.+++.+..+|.||.+ +++++|++
T Consensus 146 Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~l~~i~~ 222 (420)
T 4f4e_A 146 VAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYE---PGTIVVLHACCHNPTGVDLNDAQWAQVVE 222 (420)
T ss_dssp EEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 777788899998888888889999998 4578999999999997431 224688888999999999 55778999
Q ss_pred HHHHcCCceeeeccccCCc
Q psy852 220 VAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG~~ 238 (891)
+|+++|+++++|.+|+++.
T Consensus 223 ~~~~~~~~li~De~y~~~~ 241 (420)
T 4f4e_A 223 VVKARRLVPFLDIAYQGFG 241 (420)
T ss_dssp HHHHHTCEEEEEESCTTSS
T ss_pred HHHHCCcEEEEcccccccc
Confidence 9999999999999997654
No 266
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=98.70 E-value=3.3e-07 Score=101.81 Aligned_cols=137 Identities=9% Similarity=0.025 Sum_probs=99.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCC
Q psy852 53 PSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHP 132 (891)
Q Consensus 53 p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~ 132 (891)
+...++.+.+.+++++.+|++.+. +.+ .+++||+......+..+ ..
T Consensus 76 ~g~~~lr~~la~~l~~~~g~~~~~-------------~~i--------------~~~~g~~~al~~~~~~l-~~------ 121 (398)
T 3ele_A 76 QGDVETRAAIAEFLNNTHGTHFNA-------------DNL--------------YMTMGAAASLSICFRAL-TS------ 121 (398)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EEESSHHHHHHHHHHHH-CC------
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCh-------------HHE--------------EEccCHHHHHHHHHHHH-cC------
Confidence 344789999999999999975331 111 13567764332222222 11
Q ss_pred ccccccccCC-eEEEecCCCChHHHHHHHHcCCeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCcccc
Q psy852 133 FVDEGVLLSK-LMAYCSKEAHSCVEKAAMMAFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCS 210 (891)
Q Consensus 133 ~~~~g~~~~~-~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Ga 210 (891)
+. ..|++..-+|.+...++...+.+++.+|.++ ++.+|+++|++++++. +.+|+++..+|.+|.
T Consensus 122 --------~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~ 187 (398)
T 3ele_A 122 --------DAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINAH------TRGVIINSPNNPSGT 187 (398)
T ss_dssp --------STTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTT------EEEEEECSSCTTTCC
T ss_pred --------CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcC------CCEEEEcCCCCCCCC
Confidence 11 2477777889999888887888999999986 4689999999988653 346677788999999
Q ss_pred ccC---HHHHHHHHHH------cCCceeeeccccCC
Q psy852 211 FDN---LAEIGPVAKE------FDVWLHVDGAYAGS 237 (891)
Q Consensus 211 vDp---l~~I~~i~~~------~~~~lHvDaA~GG~ 237 (891)
+-| +.+|+++|++ +|+++++|.+|+++
T Consensus 188 ~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~ 223 (398)
T 3ele_A 188 VYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREI 223 (398)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTC
T ss_pred CCCHHHHHHHHHHHHhhhhccCCCeEEEEecccccc
Confidence 988 6777789998 89999999999654
No 267
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=98.70 E-value=4.7e-07 Score=101.47 Aligned_cols=236 Identities=13% Similarity=0.072 Sum_probs=142.7
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH----HHcCceEEEecCCCCCCcCH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRG 543 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa----~l~gv~v~~Vp~d~~G~mD~ 543 (891)
+.++|++++..++.+... +.-.|+++...|.+....+ ...|++++.+|.+ |+
T Consensus 85 ~~~sG~~a~~~~l~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~ 140 (398)
T 1gc0_A 85 ALASGMGAITSTLWTLLR-------------------PGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DL 140 (398)
T ss_dssp EESSHHHHHHHHHHHHCC-------------------TTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CH
T ss_pred EECCHHHHHHHHHHHHhc-------------------CCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CH
Confidence 345668999988877511 1225888888998887776 3467888888874 89
Q ss_pred HHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCC-----------CCccEEEEcCcccCCcc
Q psy852 544 ATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGI-----------EYADSFNVNVNKWLLTA 596 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi-----------~~aDSIs~d~HK~L~~P 596 (891)
++|+++|++++ ..+++.. ..|... |+++ +|.+ ..+|.+..++||++++|
T Consensus 141 ~~l~~~i~~~~----~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~ 216 (398)
T 1gc0_A 141 QALEAAMTPAT----RVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGH 216 (398)
T ss_dssp HHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCS
T ss_pred HHHHHhcCCCC----eEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCC
Confidence 99999987532 1222222 234433 4331 2221 24899999999999999
Q ss_pred cc--cEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy852 597 FD--SSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFE 674 (891)
Q Consensus 597 ~g--~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~ 674 (891)
.+ .|+++.+++. +...+.....++ + +-....+..|..++. .+.+...+++..++++++.
T Consensus 217 ~~~~~G~l~~~~~~-~~~~~~~~~~~~------------~----~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~l~ 277 (398)
T 1gc0_A 217 GDITAGIVVGSQAL-VDRIRLQGLKDM------------T----GAVLSPHDAALLMRG--IKTLNLRMDRHCANAQVLA 277 (398)
T ss_dssp SSCCCEEEEECHHH-HHHHHHTHHHHH------------T----CCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEChHH-HHHHHHHHhhcc------------C----CCCCCHHHHHHHHhc--cchHHHHHHHHHHHHHHHH
Confidence 87 6888776542 221111100000 0 001223455655543 3556777778888888888
Q ss_pred HHhccCCCcE--------------EeCC---CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe---e-------
Q psy852 675 GKVRRDPRFE--------------ISND---VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV---P------- 727 (891)
Q Consensus 675 ~~L~~~~~~e--------------il~~---~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s---~------- 727 (891)
+.|++.+.++ +..+ ...++++|.+.+. .+.....|.+.|+.... +
T Consensus 278 ~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~l~~~~i~~~~~s~G~~~sl~~ 349 (398)
T 1gc0_A 278 EFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGG--------IGAGRRFMNALQLFSRAVSLGDAESLAQ 349 (398)
T ss_dssp HHHHTCTTEEEEEEC----------------CCTTEEEEEETTH--------HHHHHHHHHHCSSSEECSCCSCSSCEEE
T ss_pred HHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCC--------HHHHHHHHHhCCCceeccCCCCcceeee
Confidence 8887765443 2222 2468999998531 22344445555554332 1
Q ss_pred -cc-------------ccC--CeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 728 -AS-------------QEQ--NDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 728 -s~-------------~~g--~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
+. ..+ ...+ +|++..+++++|+.+.++|+++
T Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 350 HPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp CGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 10 001 3567 9999999999999999998864
No 268
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=98.70 E-value=2.5e-07 Score=103.06 Aligned_cols=90 Identities=11% Similarity=0.041 Sum_probs=72.4
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHH---HHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLA---EIGPV 220 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~---~I~~i 220 (891)
.|++..-+|.+....+...+.+++.++.+++| +|+++|++.+++.. .-++++.+..+|.+|.+-|.+ +|+++
T Consensus 117 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~~~----~~~v~~~~~~~nptG~~~~~~~l~~l~~~ 191 (397)
T 2zyj_A 117 PVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEG-PDLDALEEVLKRER----PRFLYLIPSFQNPTGGLTPLPARKRLLQM 191 (397)
T ss_dssp EEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHCC----CSCEEECCBSCTTTCCBCCHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHcCCEEEecCcCCCC-CCHHHHHHHHhhcC----CeEEEECCCCcCCCCCcCCHHHHHHHHHH
Confidence 36777788999988887778899999998776 99999999997621 113335677789999998765 89999
Q ss_pred HHHcCCceeeeccccCCc
Q psy852 221 AKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 221 ~~~~~~~lHvDaA~GG~~ 238 (891)
|+++|+++++|.+|+++.
T Consensus 192 ~~~~~~~li~De~~~~~~ 209 (397)
T 2zyj_A 192 VMERGLVVVEDDAYRELY 209 (397)
T ss_dssp HHHHTCCEEEECTTTTCB
T ss_pred HHHcCCEEEEeCCccccc
Confidence 999999999999996643
No 269
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=98.70 E-value=6.4e-07 Score=104.02 Aligned_cols=94 Identities=12% Similarity=0.008 Sum_probs=76.6
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCC--CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc---cCHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDK--NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~--g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~ 218 (891)
.|+++.-+|.+...++...+.+++.+++|++ +.+|+++|++.+++... +..+.+|+++..+|.||.+ +++++|+
T Consensus 183 ~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~ 261 (498)
T 3ihj_A 183 GVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVI 261 (498)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHH
Confidence 5888888999999888888889999999865 48999999999987532 1234566666889999999 5577799
Q ss_pred HHHHHcCCceeeeccccCCc
Q psy852 219 PVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG~~ 238 (891)
++|+++++++++|-+|+.+.
T Consensus 262 ~la~~~~~~li~De~y~~~~ 281 (498)
T 3ihj_A 262 HFAWEEKLFLLADEVYQDNV 281 (498)
T ss_dssp HHHHHHTCEEEEECTTTTCB
T ss_pred HHHHHcCcEEEEEcCccccc
Confidence 99999999999999996543
No 270
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=98.70 E-value=4.6e-07 Score=99.59 Aligned_cols=244 Identities=8% Similarity=-0.054 Sum_probs=153.1
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+++ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.+++ +|
T Consensus 83 ~i~--~t~g~~~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~d 139 (377)
T 3fdb_A 83 WIF--PIPDVVRGLYIAIDHFTP-------------------AQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG--IN 139 (377)
T ss_dssp GEE--EESCHHHHHHHHHHHHSC-------------------TTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS--CC
T ss_pred HEE--EeCChHHHHHHHHHHhcC-------------------CCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC--CC
Confidence 556 788999999888765421 1123777888899998888888999999999876 99
Q ss_pred HHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C------CCC-----cc
Q psy852 543 GATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G------IEY-----AD 583 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G------i~~-----aD 583 (891)
+++|++++++.+ ..++++. ..|++. |.++ +| | +.. .+
T Consensus 140 ~~~l~~~l~~~~----~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 215 (377)
T 3fdb_A 140 LHDVEKGFQAGA----RSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVC 215 (377)
T ss_dssp HHHHHHHHHTTC----CEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHE
T ss_pred HHHHHHHhccCC----CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcE
Confidence 999999998742 2223322 245543 3331 11 2 001 12
Q ss_pred EEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH--HhhHH
Q psy852 584 SFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG--LSGLQ 660 (891)
Q Consensus 584 SIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG--~~G~~ 660 (891)
-+..+.||+++.| ..+|++++.++.... .+.....+. .+ ....+.+++....+. .+.++
T Consensus 216 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~-~~~~~~~~~-----------~~------~~~~~~~~a~~~~l~~~~~~~~ 277 (377)
T 3fdb_A 216 ITITAPSKAWNIAGLKCAQIIFSNPSDAE-HWQQLSPVI-----------KD------GASTLGLIAAEAAYRYGTDFLN 277 (377)
T ss_dssp EEEECSTTTTTCGGGCCEEEECCSHHHHH-HHHHSCHHH-----------HC------CCCHHHHHHHHHHHHHCHHHHH
T ss_pred EEEEeChHhccCcchhheEEEeCCHHHHH-HHHHHHHhh-----------cC------CCCHHHHHHHHHHHhccHHHHH
Confidence 5577899999644 668877776554332 221110000 00 011233333333332 35577
Q ss_pred HHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhC-CcEEEeecccc--CCeEE
Q psy852 661 KYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINAS-GRLHMVPASQE--QNDEV 736 (891)
Q Consensus 661 ~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~~~s~s~~~--g~~~l 736 (891)
+..++..++++++.+.|++ .|++++..+....++++.++..+ ...++.+.|.++ |+.+..+.... +...+
T Consensus 278 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~ 351 (377)
T 3fdb_A 278 QEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTT------IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFC 351 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSC------CCSCHHHHHHHHHCEECEEGGGGCGGGTTEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccC------CCHHHHHHHHHhCCEEecCChhccCCCCCEE
Confidence 8888889999999999988 78998876544445567775421 123456666654 88755444332 34566
Q ss_pred -EEecCCCCHHHHHHHHHHHHHHH
Q psy852 737 -FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 737 -~sv~~~tT~edId~li~~L~ei~ 759 (891)
++++ +++++|+++++.|++++
T Consensus 352 Ris~~--~~~e~i~~~l~~l~~~l 373 (377)
T 3fdb_A 352 RLNFA--TSREVLEEAIDRMAKAV 373 (377)
T ss_dssp EEECC--SCHHHHHHHHHHHHHHH
T ss_pred EEEeC--CCHHHHHHHHHHHHHHH
Confidence 8876 48999999999998776
No 271
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=98.69 E-value=1.8e-07 Score=104.67 Aligned_cols=91 Identities=14% Similarity=0.025 Sum_probs=73.0
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEec-CC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEP-DD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGP 219 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~-d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~ 219 (891)
|+++.-+|.+....+...|.+++.++. ++ ++.+|+++|++.+++.. ....+++.+..+|.||.+-+ +++|++
T Consensus 127 Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~p~nPtG~~~~~~~l~~l~~ 203 (412)
T 1yaa_A 127 VYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVD 203 (412)
T ss_dssp EEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 667777888888888777889999998 53 78899999999997531 12356666889999999955 667889
Q ss_pred HHHHcCCceeeeccccCCc
Q psy852 220 VAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG~~ 238 (891)
+|+++|+++++|.+|+++.
T Consensus 204 ~~~~~~~~li~De~~~~~~ 222 (412)
T 1yaa_A 204 AIASKNHIALFDTAYQGFA 222 (412)
T ss_dssp HHHHTTCEEEEEESCTTTS
T ss_pred HHHHCCCEEEEeccccccc
Confidence 9999999999999996543
No 272
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=98.69 E-value=2.3e-07 Score=103.78 Aligned_cols=239 Identities=12% Similarity=0.180 Sum_probs=143.1
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH----HHcCceEEEecCCCCCCcCH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRG 543 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa----~l~gv~v~~Vp~d~~G~mD~ 543 (891)
++++|++++..++.+... +.-.|+++..+|.+...++ ...|++++.+|.+ |+
T Consensus 84 ~~~sG~~a~~~~l~~~~~-------------------~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~ 139 (398)
T 2rfv_A 84 ATASGISAITTTLLTLCQ-------------------QGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KP 139 (398)
T ss_dssp EESSHHHHHHHHHHHHCC-------------------TTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SH
T ss_pred EECCHHHHHHHHHHHHhC-------------------CCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CH
Confidence 355678999988876511 1235888888999888776 5678899999885 89
Q ss_pred HHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCC-----------CCccEEEEcCcccCCcc
Q psy852 544 ATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGI-----------EYADSFNVNVNKWLLTA 596 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi-----------~~aDSIs~d~HK~L~~P 596 (891)
++|+++|++++ ..+++.. ..|... |+++ +|.+ ..+|.+..++||++++|
T Consensus 140 ~~l~~~i~~~~----~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~ 215 (398)
T 2rfv_A 140 EEIRAAMRPET----KVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGH 215 (398)
T ss_dssp HHHHHHCCTTE----EEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCS
T ss_pred HHHHHhcCCCC----eEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCC
Confidence 99999987532 1222222 234433 4431 2221 13799999999999999
Q ss_pred cc--cEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy852 597 FD--SSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFE 674 (891)
Q Consensus 597 ~g--~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~ 674 (891)
.+ +|+++.+++. +...+.. +.. .+ . +-....+.+|+.++.+ +.+...+++..++++++.
T Consensus 216 g~~~~G~~~~~~~~-~~~~~~~---~~~----------~~--~-~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~ 276 (398)
T 2rfv_A 216 GDVIGGIIVGKQEF-IDQARFV---GLK----------DI--T-GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIA 276 (398)
T ss_dssp SCCCCEEEEECHHH-HHHHHHT---HHH----------HT--T-CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEECHHH-HHHHHHH---HHH----------hC--C-CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHH
Confidence 87 6888887542 2211110 000 00 0 0011234556665544 345556666677777777
Q ss_pred HHhccCCC--------------cEEeCC---CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc--------
Q psy852 675 GKVRRDPR--------------FEISND---VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS-------- 729 (891)
Q Consensus 675 ~~L~~~~~--------------~eil~~---~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~-------- 729 (891)
+.|++.+. +++..+ ...++++|.+.+. +.....+.+.+...|+....+..
T Consensus 277 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~ 351 (398)
T 2rfv_A 277 RFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG-----LEAGRRMINSVELCLLAVSLGDTETLIQHPA 351 (398)
T ss_dssp HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH-----HHHHHHHHTTCSSSEECSCCSSSSCEEECHH
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC-----HHHHHHHHHhCCcceeccCCCCcceeeeccc
Confidence 77776543 333221 2468999988632 22344455555444443222210
Q ss_pred -------------ccC--CeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 730 -------------QEQ--NDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 730 -------------~~g--~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
..+ ...+ ++++..+++++|++++++|+++
T Consensus 352 ~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 352 SMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 012 4567 9999999999999999998764
No 273
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=98.68 E-value=1.4e-07 Score=108.73 Aligned_cols=80 Identities=10% Similarity=0.054 Sum_probs=66.8
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.+...++ ...|.+++.++.+ |+++|++++++. +.+|+++..+|.+|.+.|+++|++
T Consensus 173 ~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~ 241 (464)
T 1ibj_A 173 EIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISE 241 (464)
T ss_dssp EEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHH
T ss_pred EEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHH
Confidence 4777888899887653 3357788898875 899999988643 458888999999999999999999
Q ss_pred HHHHcCCceeeeccc
Q psy852 220 VAKEFDVWLHVDGAY 234 (891)
Q Consensus 220 i~~~~~~~lHvDaA~ 234 (891)
+|+++|+++++|.+|
T Consensus 242 la~~~gi~livDea~ 256 (464)
T 1ibj_A 242 MAHAQGALVLVDNSI 256 (464)
T ss_dssp HHHTTTCEEEEECTT
T ss_pred HHHHcCCEEEEECCC
Confidence 999999888888888
No 274
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.68 E-value=1.2e-06 Score=97.54 Aligned_cols=250 Identities=11% Similarity=0.065 Sum_probs=150.9
Q ss_pred HHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH----H
Q psy852 449 AKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA----M 524 (891)
Q Consensus 449 Ar~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa----~ 524 (891)
.+.+++.+... . .++ ++ +|++++..++.++.. +.-.|+++..+|.+...+. .
T Consensus 58 ~~~la~~~~~~-~-~i~--~~-sGt~a~~~~~~~~~~-------------------~g~~vl~~~~~~~~~~~~~~~~~~ 113 (386)
T 1cs1_A 58 QRALAELEGGA-G-AVL--TN-TGMSAIHLVTTVFLK-------------------PGDLLVAPHDCYGGSYRLFDSLAK 113 (386)
T ss_dssp HHHHHHHHTCS-E-EEE--ES-SHHHHHHHHHHHHCC-------------------TTCEEEEETTCCHHHHHHHHHHHT
T ss_pred HHHHHHHhCCC-c-EEE--eC-CHHHHHHHHHHHHhC-------------------CCCEEEEecCCcHhHHHHHHHHHH
Confidence 34555555432 2 333 34 448999888776510 1124777788888765543 4
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------hhhh-----hcCC---------
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------CYRK-----SQGI--------- 579 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c~~~-----ldGi--------- 579 (891)
..|.+++.+|.+ |+++|+++|++++ ..+++... .|... |+++ +|.+
T Consensus 114 ~~g~~~~~~~~~-----d~~~l~~~i~~~~----~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~ 184 (386)
T 1cs1_A 114 RGCYRVLFVDQG-----DEQALRAALAEKP----KLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNP 184 (386)
T ss_dssp TTSCEEEEECTT-----CHHHHHHHHHTCC----SEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCG
T ss_pred hcCCEEEEeCCC-----CHHHHHHhhccCC----cEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 467888888874 8999999997532 22333322 24433 4431 2211
Q ss_pred --CCccEEEEcCcccCCccccc--EEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH
Q psy852 580 --EYADSFNVNVNKWLLTAFDS--SCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG 655 (891)
Q Consensus 580 --~~aDSIs~d~HK~L~~P~g~--G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG 655 (891)
..+|.+..++||++++|.+. |+++.++++.... +.. +.. .++ -....+..|..++ +
T Consensus 185 ~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~-l~~---~~~----------~~~----~~~~~~~~~~~~~--~ 244 (386)
T 1cs1_A 185 LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTE-LAW---WAN----------NIG----VTGGAFDSYLLLR--G 244 (386)
T ss_dssp GGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHH-HHH---HHH----------HHT----CBCCHHHHHHHHH--H
T ss_pred cccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHH-HHH---HHH----------hcC----CCCCHHHHHHHHh--c
Confidence 24799999999999999874 8888876432221 110 000 000 0011233444433 3
Q ss_pred HhhHHHHHHHHHHHHHHHHHHhccCCCcEEe-CC----------------CceeEEEEEecCCcchhhhhhHHHHHHHHH
Q psy852 656 LSGLQKYIRRHCELAKLFEGKVRRDPRFEIS-ND----------------VRLGLVCFRLRSENNLIADQNNRKLLEDIN 718 (891)
Q Consensus 656 ~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil-~~----------------~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~ 718 (891)
.+.+.+..++..++++++.+.|++.+.+.-. .+ ...++++|.+.+. .+.+...|.
T Consensus 245 l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~ 316 (386)
T 1cs1_A 245 LRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD--------EQTLRRFLG 316 (386)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC--------HHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC--------HHHHHHHHH
Confidence 4456667777888899999998887665432 11 1267899998531 456777788
Q ss_pred hCCcEEEe---e--------cc---------------ccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 719 ASGRLHMV---P--------AS---------------QEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 719 ~~G~~~~s---~--------s~---------------~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.|++... + +. -....++ ++++..+++++|+.+.++|+++.
T Consensus 317 ~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 317 GLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAAN 384 (386)
T ss_dssp TCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHT
T ss_pred hCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 88986541 1 00 0113567 99999999999999999888653
No 275
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=98.67 E-value=1.6e-07 Score=104.49 Aligned_cols=250 Identities=9% Similarity=-0.057 Sum_probs=153.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC-CCC--
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKN-- 539 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d-~~G-- 539 (891)
+|+ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.+ ++|
T Consensus 91 ~v~--~t~g~~~a~~~~~~~l~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 149 (399)
T 1c7n_A 91 WII--NTAGVVPAVFNAVREFTK-------------------PGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYY 149 (399)
T ss_dssp GEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEE
T ss_pred hEE--EcCCHHHHHHHHHHHhcC-------------------CCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCE
Confidence 455 788999999888765421 12247778888989888888888999999985 443
Q ss_pred CcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C--------CC---
Q psy852 540 SLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G--------IE--- 580 (891)
Q Consensus 540 ~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G--------i~--- 580 (891)
.+|+++|+++|++. ....++++. ..|+.. |.++ +| | +.
T Consensus 150 ~~d~~~l~~~l~~~---~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 226 (399)
T 1c7n_A 150 TIDFQKLEKLSKDK---NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQL 226 (399)
T ss_dssp ECCHHHHHHHHTCT---TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHH
T ss_pred EEcHHHHHHHhccC---CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccc
Confidence 69999999999732 111222222 234432 3331 11 1 11
Q ss_pred -CccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH--HH
Q psy852 581 -YADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY--GL 656 (891)
Q Consensus 581 -~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l--G~ 656 (891)
..+-+..+.||+++.| ..+|++++++++.+.........+ +.. ....+.++++...+ +.
T Consensus 227 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~--------------~~~---~~~~~~~~a~~~~l~~~~ 289 (399)
T 1c7n_A 227 ADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDAT--------------SGM---PFTTLGYKACEICYKECG 289 (399)
T ss_dssp HTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHT--------------TCC---CCCHHHHHHHHHHHHHCH
T ss_pred cCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhc--------------ccC---CCCHHHHHHHHHHHhCCh
Confidence 1234567899999855 458999987653332211110000 000 01123334333333 24
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeecccc--C
Q psy852 657 SGLQKYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQE--Q 732 (891)
Q Consensus 657 ~G~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~~--g 732 (891)
+.+++..++..++++++.+.|++ +|++++..+....+++++++.. +.....+.+.|. +.|+.+..+.... +
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~ 364 (399)
T 1c7n_A 290 KWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRAL-----KMDHKAMEEFMIHKAQIFFDEGYIFGDGG 364 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGG-----CCCHHHHHHHHHHTTCCCCEEGGGGCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccC-----CCCHHHHHHHHHHhCCEEEeCccccCCCC
Confidence 56777778888999999999988 7888776543333445777531 113567888886 6898765444332 3
Q ss_pred CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 733 NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 733 ~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
...+ ++++.. +++|+++++.|++.++
T Consensus 365 ~~~iRis~~~~--~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 365 IGFERINLAAP--SSVIQESLERLNKALK 391 (399)
T ss_dssp TTEEEEECCSC--HHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeccC--HHHHHHHHHHHHHHHH
Confidence 4566 887654 7899999999988764
No 276
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=98.66 E-value=2.3e-07 Score=104.75 Aligned_cols=82 Identities=9% Similarity=0.117 Sum_probs=67.9
Q ss_pred EEEecCCCChHHHHHH----HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa----~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~ 219 (891)
.|+++..+|.+....+ ...|.+++.++.+ |+++|++.+++. +.+|+++..+|.+|.+.|+++|++
T Consensus 107 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~ 175 (403)
T 3cog_A 107 QIICMDDVYGGTNRYFRQVASEFGLKISFVDCS-----KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAH 175 (403)
T ss_dssp EEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT-----SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred EEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHH
Confidence 4888888999876654 2357789999876 899999988653 357888899999999999999999
Q ss_pred HHHHcC-CceeeeccccC
Q psy852 220 VAKEFD-VWLHVDGAYAG 236 (891)
Q Consensus 220 i~~~~~-~~lHvDaA~GG 236 (891)
+|+++| +++++|.+|++
T Consensus 176 la~~~g~~~livD~~~~~ 193 (403)
T 3cog_A 176 IVHKHGDIILVVDNTFMS 193 (403)
T ss_dssp HHTSSSCCEEEEECTTTC
T ss_pred HHHHcCCCEEEEECCCcc
Confidence 999999 98999988844
No 277
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=98.66 E-value=1.2e-06 Score=99.98 Aligned_cols=91 Identities=14% Similarity=0.021 Sum_probs=75.6
Q ss_pred EEecCCCChHHHHHHH----HcCCeEEEEec-CCC--CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCH---
Q psy852 145 AYCSKEAHSCVEKAAM----MAFVRLKILEP-DDK--NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNL--- 214 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~----~~~~~v~~V~~-d~~--g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl--- 214 (891)
|+++.-+|.+....+. ..|.+++.++. |++ +.+|+++|++.+++.. ..+.+++.+..+|.||.+-+.
T Consensus 148 Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~---~~~~~v~~~~p~NPtG~~~~~~~l 224 (448)
T 3meb_A 148 FYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAP---EKSIFLFHACAHNPSGIDFTEAQW 224 (448)
T ss_dssp EEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHH
T ss_pred EEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCC---CCcEEEEeCCCCCCCCcCCCHHHH
Confidence 8888888999888887 77889999998 665 8999999999998631 124688888889999998775
Q ss_pred HHHHHHHHHcCCceeeeccccCCc
Q psy852 215 AEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 215 ~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
++|+++|+++|+++++|.||+++.
T Consensus 225 ~~i~~l~~~~~~~li~Deay~~~~ 248 (448)
T 3meb_A 225 KELLPIMKEKKHIAFFDSAYQGFA 248 (448)
T ss_dssp HHHHHHHHHHTCEEEEEESCTTTS
T ss_pred HHHHHHHHHCCCEEEEeccccccc
Confidence 459999999999999999997644
No 278
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=98.66 E-value=1e-06 Score=97.98 Aligned_cols=222 Identities=11% Similarity=0.019 Sum_probs=141.4
Q ss_pred EEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------hhhh-
Q psy852 508 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------CYRK- 575 (891)
Q Consensus 508 vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c~~~- 575 (891)
.|+++...|.+...++...|.+++.+|.+ |+++|++++++........+++... .|+.. |+++
T Consensus 134 ~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~ 208 (401)
T 2bwn_A 134 IIYSDSLNHASMIEGIKRNAGPKRIFRHN-----DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFG 208 (401)
T ss_dssp EEEEETTCCHHHHHHHHHSCCCEEEECTT-----CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHT
T ss_pred EEEECchhhHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcC
Confidence 58888899999999998889999999985 8999999997532111122222222 34443 4331
Q ss_pred ----hc-----------C--------C-CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-CCCccccCCCCCcc
Q psy852 576 ----SQ-----------G--------I-EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAID 630 (891)
Q Consensus 576 ----ld-----------G--------i-~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~ 630 (891)
+| | + +..|-+..+.+|.++.|- |+++.. ++ +.+.+.. ...|..
T Consensus 209 ~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~~-~~-~~~~l~~~~~~~~~-------- 276 (401)
T 2bwn_A 209 ALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAAS-AR-MVDAVRSYAPGFIF-------- 276 (401)
T ss_dssp CEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEEC-HH-HHHHHHHHCHHHHT--------
T ss_pred CEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC--CEEecC-HH-HHHHHHHhCcCcee--------
Confidence 11 1 1 124777779999998754 666653 32 2222211 111100
Q ss_pred ccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhH
Q psy852 631 YRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNN 710 (891)
Q Consensus 631 ~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln 710 (891)
+. ++-......+..+++.+...|+.+..++..++++++.+.|++. +++++. +..++++|++.. +...
T Consensus 277 ----~~-~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~------~~~~ 343 (401)
T 2bwn_A 277 ----ST-SLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID-HGSHIVPVVIGD------PVHT 343 (401)
T ss_dssp ----SB-CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC-CSSSCEEEECCC------HHHH
T ss_pred ----cC-CCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCCeEEEEeCC------hHHH
Confidence 00 0111223344566666666677888899999999999999887 777764 455788888752 2245
Q ss_pred HHHHHHHH-hCCcEEEeecc--c-cCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 711 RKLLEDIN-ASGRLHMVPAS--Q-EQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 711 ~~L~~~L~-~~G~~~~s~s~--~-~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
..+.+.|. +.|+.+..... . .+...+ ++++.++|++||+++++.|+++.
T Consensus 344 ~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~ 397 (401)
T 2bwn_A 344 KAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLW 397 (401)
T ss_dssp HHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHH
Confidence 67888885 67877432221 1 133467 99998899999999999998775
No 279
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.64 E-value=8e-07 Score=98.51 Aligned_cols=88 Identities=8% Similarity=0.029 Sum_probs=73.4
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCC-cccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHH---HHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKN-SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAE---IGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g-~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~---I~~ 219 (891)
.|+++.-+|.+...++...+.+++.++.+++| .+|+++|++++.+. +.+|+++..+|.+|.+-|.++ |++
T Consensus 122 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~ 195 (396)
T 3jtx_A 122 AIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKR------TKLVFVCSPNNPSGSVLDLDGWKEVFD 195 (396)
T ss_dssp EEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHT------EEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccC------cEEEEEECCCCCCCCcCCHHHHHHHHH
Confidence 47777788999988888788899999997665 68999999999764 346666678999999977666 889
Q ss_pred HHHHcCCceeeeccccCC
Q psy852 220 VAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG~ 237 (891)
+|+++|+++++|.+|+++
T Consensus 196 ~~~~~~~~li~De~~~~~ 213 (396)
T 3jtx_A 196 LQDKYGFIIASDECYSEI 213 (396)
T ss_dssp HHHHHCCEEEEECTTTTC
T ss_pred HHHHcCCEEEEEcccccc
Confidence 999999999999999654
No 280
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=98.64 E-value=6.1e-07 Score=99.57 Aligned_cols=243 Identities=10% Similarity=0.004 Sum_probs=149.3
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCC--C
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKN--S 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G--~ 540 (891)
+|+ +++|+++++..++.+... +.-.|++..-.|.+...++...|.+++.+|.++++ .
T Consensus 93 ~v~--~t~g~~~al~~~~~~l~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 151 (391)
T 3h14_A 93 RVV--ITPGSSGGFLLAFTALFD-------------------SGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQ 151 (391)
T ss_dssp GEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTS
T ss_pred HEE--EecChHHHHHHHHHHhcC-------------------CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence 566 789999999888765421 11247788888999999888899999999998654 7
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hcC----------------CCCccEE
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQG----------------IEYADSF 585 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ldG----------------i~~aDSI 585 (891)
+|+++|+++ + ...++++. ..|++. |.++ +|. ....+-+
T Consensus 152 ~d~~~l~~~---~----~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~ 224 (391)
T 3h14_A 152 PVPADFAGL---D----LAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYV 224 (391)
T ss_dssp CCHHHHTTS---C----CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEE
T ss_pred CCHHHHHhc---C----CeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEE
Confidence 899999876 1 11223322 245443 3331 111 1123455
Q ss_pred EEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH-HHhhHHHHH
Q psy852 586 NVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY-GLSGLQKYI 663 (891)
Q Consensus 586 s~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l-G~~G~~~~i 663 (891)
..+.+|+++ ....+|+++..++ +.+.+.....+ ..++ ...+.+++.+..+ +.+.+.+..
T Consensus 225 ~~s~sK~~g~~G~r~G~~~~~~~--~~~~~~~~~~~-----------~~~~------~~~~~~~a~~~~l~~~~~~~~~~ 285 (391)
T 3h14_A 225 INSFSKYFSMTGWRVGWMVVPED--QVRVVERIAQN-----------MFIC------APHASQVAALAALDCDAELQANL 285 (391)
T ss_dssp EEESSSTTCCTTSCCEEEECCGG--GHHHHHHHHHH-----------TTCC------CCHHHHHHHHHHTTCHHHHHHHH
T ss_pred EEechhccCCccceeEEEEeCHH--HHHHHHHHHhh-----------hccC------CCHHHHHHHHHHhCChHHHHHHH
Confidence 668999997 5567888887544 22222100000 0001 1122223332222 456678888
Q ss_pred HHHHHHHHHHHHHhccCCCcEEeCCCce-eEEEEEecCCcchhhhhhHHHHHHHHHhC-CcEEEeecccc---CCeEE-E
Q psy852 664 RRHCELAKLFEGKVRRDPRFEISNDVRL-GLVCFRLRSENNLIADQNNRKLLEDINAS-GRLHMVPASQE---QNDEV-F 737 (891)
Q Consensus 664 ~~~~~lA~~L~~~L~~~~~~eil~~~~~-~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~~~s~s~~~---g~~~l-~ 737 (891)
++..++++++.+.|++.+ +....++.. ..+.+.+... .....++.+.|.++ |+.+..+..+. +...+ +
T Consensus 286 ~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRi 359 (391)
T 3h14_A 286 DVYKANRKLMLERLPKAG-FTRIAPPDGAFYVYADVSDL-----TDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRF 359 (391)
T ss_dssp HHHHHHHHHHHHHHHHHT-CCCBCCCCBTTEEEEECTTT-----CSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHcC-CCcccCCCeeEEEEEecCcc-----CCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEE
Confidence 888999999999998874 333333333 4555666532 12456788887765 98765554432 24566 8
Q ss_pred EecCCCCHHHHHHHHHHHHHHHH
Q psy852 738 ELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 738 sv~~~tT~edId~li~~L~ei~~ 760 (891)
+++. ++++|+++++.|+++..
T Consensus 360 s~~~--~~~~i~~~l~~l~~~~~ 380 (391)
T 3h14_A 360 SYAR--ATADIEEGLDRLEAFMQ 380 (391)
T ss_dssp ECCS--CHHHHHHHHHHHHHHHH
T ss_pred EecC--CHHHHHHHHHHHHHHHH
Confidence 8775 78999999999998874
No 281
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=98.63 E-value=2.5e-06 Score=92.25 Aligned_cols=84 Identities=13% Similarity=-0.002 Sum_probs=71.3
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|++..-+|.+....+...|.+++.+++++++.+|+++|++.. .+.+|+++..+|.+|.+-|++++.++|++
T Consensus 92 ~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 163 (337)
T 3p1t_A 92 RFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQVS--------RDDCVVLANPSNPTGQALSAGELDQLRQR 163 (337)
T ss_dssp EEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTCC--------TTEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 3778888999998888777889999999999999999998751 13588888889999999999999999999
Q ss_pred cCCceeeeccccC
Q psy852 224 FDVWLHVDGAYAG 236 (891)
Q Consensus 224 ~~~~lHvDaA~GG 236 (891)
+++ +.+|.||++
T Consensus 164 ~~~-~ivDea~~~ 175 (337)
T 3p1t_A 164 AGK-LLIDETYVD 175 (337)
T ss_dssp CSE-EEEECTTGG
T ss_pred CCc-EEEECCChh
Confidence 986 555998854
No 282
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=98.63 E-value=1.1e-06 Score=96.93 Aligned_cols=86 Identities=10% Similarity=-0.023 Sum_probs=68.9
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++.-+|.+...++...|.+++.++.++++.+|+++|+++++ . +.+|+++..+|.||.+-|.+++.++++.
T Consensus 102 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~ 174 (356)
T 1fg7_A 102 AILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLEL 174 (356)
T ss_dssp EEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 47777889999988887777899999998888999999998775 2 3466667889999999887666555444
Q ss_pred --cCCceeeeccccC
Q psy852 224 --FDVWLHVDGAYAG 236 (891)
Q Consensus 224 --~~~~lHvDaA~GG 236 (891)
+|+++++|.+|++
T Consensus 175 ~~~~~~li~De~~~~ 189 (356)
T 1fg7_A 175 TRGKAIVVADEAYIE 189 (356)
T ss_dssp HTTTCEEEEECTTGG
T ss_pred CCCCCEEEEEccchh
Confidence 8899999999854
No 283
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=98.63 E-value=9.7e-07 Score=99.79 Aligned_cols=255 Identities=11% Similarity=0.043 Sum_probs=157.7
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC--CCCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD--DKNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d--~~G~ 540 (891)
+++ +++|+++++..++.+... +.-.|+++.-+|......+...|++++.+|.+ .++.
T Consensus 120 ~v~--~t~g~t~al~~~~~~l~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 178 (427)
T 3dyd_A 120 DVI--LTSGCSQAIDLCLAVLAN-------------------PGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWE 178 (427)
T ss_dssp GEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTE
T ss_pred HEE--EecCcHHHHHHHHHHhcC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCC
Confidence 455 788999999888776521 12247777888888888888889999998875 4578
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------CC---------CCcc
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------GI---------EYAD 583 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------Gi---------~~aD 583 (891)
+|+++|+++|++.+ ..++++. ..|+.. |.++ +| |- ...+
T Consensus 179 ~d~~~l~~~l~~~~----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~ 254 (427)
T 3dyd_A 179 IDLKQLEYLIDEKT----ACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVP 254 (427)
T ss_dssp ECHHHHHSSCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCC
T ss_pred CCHHHHHHHhccCC----CEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCc
Confidence 99999999986532 1222222 234433 3321 11 10 1112
Q ss_pred EE-EEcCcccCCcc-cccEEEEEeCCcc-----chhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH
Q psy852 584 SF-NVNVNKWLLTA-FDSSCLWVADRYK-----LTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL 656 (891)
Q Consensus 584 SI-s~d~HK~L~~P-~g~G~llvR~~~~-----L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~ 656 (891)
.| ..+.||.++.| ..+|+++++++.. +...+.. +... .++. -.+....+..+|+....
T Consensus 255 vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~---~~~~---------~~~~---~~~~~~a~~~~L~~~~~ 319 (427)
T 3dyd_A 255 ILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVK---LSQR---------ILGP---CTIVQGALKSILCRTPG 319 (427)
T ss_dssp EEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHH---HHHH---------HCCS---CHHHHHHHHHHHHHSCH
T ss_pred EEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHH---HHhc---------cCCC---CHHHHHHHHHHHHhcCH
Confidence 34 44999975544 5689999987521 1111110 0000 0000 01111222333333336
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeeccccCCeE
Q psy852 657 SGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQEQNDE 735 (891)
Q Consensus 657 ~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~~g~~~ 735 (891)
+.+.++.++..++++++.+.|+++++++++.+.....+.+++......+ .....++.++|. +.|+++..+.......+
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~ 398 (427)
T 3dyd_A 320 EFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPE-FENDVEFTERLVAEQSVHCLPATCFEYPNF 398 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTT-CSSHHHHHHHHHHHHCEECEEGGGGTCTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCC-CCCHHHHHHHHHHHCCEEEECCcccCCCCe
Confidence 6788888899999999999999999998876655566666764210000 123456777774 68988666655555566
Q ss_pred E-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 736 V-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 736 l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+ +++. +++++|+++++.|.++++
T Consensus 399 iRis~~--~~~e~i~~~l~~l~~~l~ 422 (427)
T 3dyd_A 399 IRVVIT--VPEVMMLEACSRIQEFCE 422 (427)
T ss_dssp EEEESC--SCHHHHHHHHHHHHHHHH
T ss_pred EEEEEC--CCHHHHHHHHHHHHHHHH
Confidence 7 8875 789999999999988763
No 284
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=98.62 E-value=7.1e-08 Score=108.11 Aligned_cols=248 Identities=11% Similarity=0.041 Sum_probs=153.1
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC---CC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD---KN 539 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~---~G 539 (891)
+|+ +++|+++++..++.+... +.-.|+++..+|.+...++...|.+++.+|.++ ++
T Consensus 88 ~v~--~t~g~~~al~~~~~~~~~-------------------~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 146 (411)
T 2o0r_A 88 EVL--VTVGATEAIAAAVLGLVE-------------------PGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGF 146 (411)
T ss_dssp SEE--EEEHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEE
T ss_pred eEE--EeCCHHHHHHHHHHHhcC-------------------CCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCC
Confidence 455 678999999988766421 112478888889998888888899999999865 36
Q ss_pred CcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh--------------hcC--------C---C
Q psy852 540 SLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK--------------SQG--------I---E 580 (891)
Q Consensus 540 ~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~--------------ldG--------i---~ 580 (891)
.+|+++|+++|++.. ..++++ +..|.+. |.++ .+| + .
T Consensus 147 ~~d~~~l~~~l~~~~----~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 222 (411)
T 2o0r_A 147 ALDADALRRAVTPRT----RALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMA 222 (411)
T ss_dssp ECCHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTG
T ss_pred CCCHHHHHHhhccCc----eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCC
Confidence 799999999996421 122333 2345442 3321 111 1 2
Q ss_pred CccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhH
Q psy852 581 YADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGL 659 (891)
Q Consensus 581 ~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~ 659 (891)
..|.+..++||+++.| ..+|+++.+++ +.+.+.....+. .++. + ......+..+|+. +.+.+
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~l~~~~~~~-----------~~~~--~-~~~~~a~~~~l~~-~~~~~ 285 (411)
T 2o0r_A 223 ERTITISSAAKMFNCTGWKIGWACGPAE--LIAGVRAAKQYL-----------SYVG--G-APFQPAVALALDT-EDAWV 285 (411)
T ss_dssp GGEEEEEEHHHHTTCTTTCEEEEECCHH--HHHHHHHHHHHH-----------TSCC--C-TTHHHHHHHHHHH-CHHHH
T ss_pred CCEEEEeechhhcCCccceEEEEeeCHH--HHHHHHHHHhhc-----------cCCC--C-hHHHHHHHHHHhC-ChHHH
Confidence 4688999999988744 33899887532 222221100000 0111 1 1111122233332 35567
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeecccc-------
Q psy852 660 QKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQE------- 731 (891)
Q Consensus 660 ~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~~------- 731 (891)
++..++..+++++|.+.|++. ++++..+.....+++++.+.. +....++.+.|. +.|+.+..+....
T Consensus 286 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~ 360 (411)
T 2o0r_A 286 AALRNSLRARRDRLAAGLTEI-GFAVHDSYGTYFLCADPRPLG----YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQA 360 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TCEECCCCBSSEEEEECGGGT----CCCHHHHHHHHHHHHSEECEEGGGGSCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCEecCCCeeEEEEEecCCCC----CCCHHHHHHHHHHhCCEEEcChhhhCCCccccc
Confidence 778888889999999999886 788765433347888885310 013467888776 5798765544331
Q ss_pred ------CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 732 ------QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 732 ------g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+...+ +++. +++++|+++++.|+++.
T Consensus 361 ~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~~ 393 (411)
T 2o0r_A 361 SQQADVWNHLVRFTFC--KRDDTLDEAIRRLSVLA 393 (411)
T ss_dssp ----CCGGGCEEEECC--SCHHHHHHHHHHHGGGG
T ss_pred cccccCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 23456 8875 38999999999887654
No 285
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=98.62 E-value=2.1e-07 Score=103.08 Aligned_cols=244 Identities=8% Similarity=0.019 Sum_probs=152.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC-CCCc
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD-KNSL 541 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~-~G~m 541 (891)
+++ +++|+++++..++.+... +.-.|+++.-+|.+...++...|.+++.+|.++ ++.+
T Consensus 93 ~v~--~~~g~~~a~~~~~~~~~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 151 (386)
T 1u08_A 93 DIT--VTAGATEALYAAITALVR-------------------NGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRV 151 (386)
T ss_dssp TEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCC
T ss_pred CEE--EcCChHHHHHHHHHHhCC-------------------CCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcC
Confidence 455 678999999888766410 112477778888888888888899999999976 5889
Q ss_pred CHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C--------C---CCc
Q psy852 542 RGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G--------I---EYA 582 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G--------i---~~a 582 (891)
|+++|+++|++.. ..++++. ..|.+. |.++ +| | + ...
T Consensus 152 d~~~l~~~l~~~~----~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 227 (386)
T 1u08_A 152 DWQEFAALLSERT----RLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRER 227 (386)
T ss_dssp CHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTT
T ss_pred CHHHHHHhhcccC----EEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCc
Confidence 9999999986421 1223322 245442 3321 11 1 1 135
Q ss_pred cEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH--HHhhH
Q psy852 583 DSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY--GLSGL 659 (891)
Q Consensus 583 DSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l--G~~G~ 659 (891)
|.+..++||+++.| ..+|+++++++ +.+.+.....+ ..++. ..+.+++....+ +.+.+
T Consensus 228 ~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~l~~~~~~-----------~~~~~------~~~~~~a~~~~l~~~~~~~ 288 (386)
T 1u08_A 228 AVAVSSFGKTYHMTGWKVGYCVAPAP--ISAEIRKVHQY-----------LTFSV------NTPAQLALADMLRAEPEHY 288 (386)
T ss_dssp EEEEEEHHHHTTCGGGCCEEEECCHH--HHHHHHHHHHH-----------HTSSC------CHHHHHHHHHHHHHCTHHH
T ss_pred EEEEecchhhcCCcccceEEEEcCHH--HHHHHHHHHHh-----------hccCC------ChHHHHHHHHHHhCCcHHH
Confidence 78899999999844 34899887643 22222110000 00111 112222222222 24567
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeeccc----cCCe
Q psy852 660 QKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQ----EQND 734 (891)
Q Consensus 660 ~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~----~g~~ 734 (891)
++..++..+++++|.+.|++. ++++..+.....+++++++.. .....++.+.|. +.|+.+..+... .+..
T Consensus 289 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~ 363 (386)
T 1u08_A 289 LALPDFYRQKRDILVNALNES-RLEILPCEGTYFLLVDYSAVS----TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHK 363 (386)
T ss_dssp HTHHHHHHHHHHHHHHHTTSS-SCEECCCCBSSEEEEECTTTC----CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCeecCCCceEEEEEecCCCC----CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCC
Confidence 777888889999999999887 788765544567888885320 013467788776 579876544433 2445
Q ss_pred EE-EEecCCCCHHHHHHHHHHHHH
Q psy852 735 EV-FELQERKRKDDLAYKRSFFVR 757 (891)
Q Consensus 735 ~l-~sv~~~tT~edId~li~~L~e 757 (891)
.+ +++. +++++|+++++.|++
T Consensus 364 ~iRis~~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 364 LIRLCFA--KKESTLLAAAERLRQ 385 (386)
T ss_dssp EEEEECC--SCHHHHHHHHHHHTT
T ss_pred EEEEEEc--CCHHHHHHHHHHHhh
Confidence 66 8876 489999999988753
No 286
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=98.62 E-value=6.7e-07 Score=98.42 Aligned_cols=137 Identities=13% Similarity=-0.002 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCcc
Q psy852 55 CTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFV 134 (891)
Q Consensus 55 ~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~ 134 (891)
..++++.+.+++.+.+|.+.+. +.+ .+++||+...+..+..+ ....
T Consensus 61 ~~~lr~~la~~l~~~~g~~~~~-------------~~i--------------~~t~g~~~al~~~~~~~-~~~~------ 106 (376)
T 3ezs_A 61 EESLRAAQRGFFKRRFKIELKE-------------NEL--------------ISTLGSREVLFNFPSFV-LFDY------ 106 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCG-------------GGE--------------EEESSSHHHHHHHHHHH-TTTC------
T ss_pred CHHHHHHHHHHHHHHhCCCCCH-------------HHE--------------EECcCcHHHHHHHHHHH-cCCC------
Confidence 4689999999999999984221 111 14567764333222222 1110
Q ss_pred ccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC-
Q psy852 135 DEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN- 213 (891)
Q Consensus 135 ~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp- 213 (891)
....|++..-+|.+...++...+.+++.++.++++.+++ +|++.+.+.. .+|+++..+|.+|.+-|
T Consensus 107 ------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~~~------~~v~~~~p~nptG~~~~~ 173 (376)
T 3ezs_A 107 ------QNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQEV------DLVILNSPNNPTGRTLSL 173 (376)
T ss_dssp ------SSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHHHC------SEEEECSSCTTTCCCCCH
T ss_pred ------CCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch-hHHhhhccCC------CEEEEcCCCCCcCCCCCH
Confidence 012477778889999988887888999999998776777 7877776543 36666778999999977
Q ss_pred --HHHHHHHHHHcCCceeeeccccCCc
Q psy852 214 --LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 214 --l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+.+|+++|+++|+++++|.+|+++.
T Consensus 174 ~~l~~i~~~~~~~~~~li~De~~~~~~ 200 (376)
T 3ezs_A 174 EELISWVKLALKHDFILINDECYSEIY 200 (376)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred HHHHHHHHHHHHcCcEEEEEccchhhc
Confidence 6677778999999999999997643
No 287
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.61 E-value=5.6e-07 Score=99.82 Aligned_cols=249 Identities=12% Similarity=-0.001 Sum_probs=151.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC---C
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK---N 539 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~---G 539 (891)
+|+ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.+.+ +
T Consensus 89 ~v~--~t~g~~~al~~~~~~l~~-------------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 147 (390)
T 1d2f_A 89 TVV--YGPSVIYMVSELIRQWSE-------------------TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGW 147 (390)
T ss_dssp GEE--EESCHHHHHHHHHHHSSC-------------------TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSE
T ss_pred HEE--EcCCHHHHHHHHHHHhcC-------------------CCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCcc
Confidence 455 788999999887765421 1124777778888998888888999999998654 3
Q ss_pred CcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C--------CC-C-
Q psy852 540 SLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G--------IE-Y- 581 (891)
Q Consensus 540 ~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G--------i~-~- 581 (891)
.+|+++|+++|++. ....++++. ..|++. |.++ +| | +. .
T Consensus 148 ~~d~~~l~~~l~~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 224 (390)
T 1d2f_A 148 FCDMGKLEAVLAKP---ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGD 224 (390)
T ss_dssp ECCHHHHHHHHTST---TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSS
T ss_pred ccCHHHHHHHhccC---CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhh
Confidence 69999999999752 111222222 235442 3331 11 1 11 1
Q ss_pred ccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH--HHhh
Q psy852 582 ADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY--GLSG 658 (891)
Q Consensus 582 aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l--G~~G 658 (891)
.|. ..++||+++.| ..+|++++++++... .+.....+ ..+.. ....+.+++....+ +.+.
T Consensus 225 ~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~-~~~~~~~~------------~~~~~---~~~~~~~~a~~~~l~~~~~~ 287 (390)
T 1d2f_A 225 WAL-LTSGSKSFNIPALTGAYGIIENSSSRD-AYLSALKG------------RDGLS---SPSVLALTAHIAAYQQGAPW 287 (390)
T ss_dssp EEE-EECSHHHHTCGGGCCEEEEECSHHHHH-HHHHHHHT------------TSCCC---SCCHHHHHHHHHHHHHCHHH
T ss_pred Hhh-ccCccHhhcccChhheEEEECCHHHHH-HHHHHHhh------------hcccC---CCCHHHHHHHHHHHhcCHHH
Confidence 155 88999999744 468999987543322 12110000 00000 01123333333333 2445
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeeccc--cCCe
Q psy852 659 LQKYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQ--EQND 734 (891)
Q Consensus 659 ~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~--~g~~ 734 (891)
+++..++..++++++.+.|++ .|++++..+....++++++++. +....++.+.|. +.|+.+..+... .+..
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~ 362 (390)
T 1d2f_A 288 LDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPL-----NIDDNALQKALIEQEKVAIMPGYTYGEEGRG 362 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGG-----CCCHHHHHHHHHHTTCEECEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEcccc-----CCCHHHHHHHHHHHcCEEeeCccccCCCCCC
Confidence 677777888899999999988 7888775443333456777531 013567888888 579876554433 2345
Q ss_pred EE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 735 EV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 735 ~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.+ ++++. ++++++++++.|++++
T Consensus 363 ~~Ris~~~--~~~~l~~~l~~l~~~l 386 (390)
T 1d2f_A 363 FVRLNAGC--PRSKLEKGVAGLINAI 386 (390)
T ss_dssp EEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred eEEEEecC--CHHHHHHHHHHHHHHH
Confidence 66 88775 4789999998888776
No 288
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=98.61 E-value=1.1e-06 Score=94.94 Aligned_cols=245 Identities=9% Similarity=0.029 Sum_probs=153.9
Q ss_pred HHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCce
Q psy852 450 KLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVR 529 (891)
Q Consensus 450 r~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~ 529 (891)
+.+++.+...+. +|+ +++|+++++..++.+. + .-.|++..-.|.+...++...|++
T Consensus 58 ~~la~~~~~~~~-~i~--~t~G~~~~l~~~~~~~-----~----------------gd~vl~~~p~~~~~~~~~~~~g~~ 113 (337)
T 3p1t_A 58 RKLAEHFSCPED-NLM--LVRGIDECFDRISAEF-----S----------------SMRFVTAWPGFDGYRARIAVSGLR 113 (337)
T ss_dssp HHHHHHHTSCGG-GEE--EESHHHHHHHHHHHHS-----T----------------TSEEEEESSSCSHHHHHHTTSCCE
T ss_pred HHHHHHhCcCHH-HEE--EeCCHHHHHHHHHHhc-----C----------------CCeEEEeCCCcHHHHHHHHHcCCE
Confidence 344444544333 566 6889899888776653 1 114778888999998888888999
Q ss_pred EEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh----hc--------------CCC
Q psy852 530 LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK----SQ--------------GIE 580 (891)
Q Consensus 530 v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~----ld--------------Gi~ 580 (891)
++.+|.++++.+|+++|+++.+ ...++++ +..|++. |.++ +| +..
T Consensus 114 ~~~v~~~~~~~~d~~~l~~~~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~ivDea~~~~~~~~~~~~~~~ 187 (337)
T 3p1t_A 114 HFEIGLTDDLLLDPNDLAQVSR------DDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRARGLAYG 187 (337)
T ss_dssp EEEECBCTTSSBCHHHHTTCCT------TEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTGGGSSCSSSCCCCB
T ss_pred EEEecCCCCCCCCHHHHHhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCcEEEECCChhhccccccccccC
Confidence 9999999999999999987621 1222322 2245554 2210 11 112
Q ss_pred CccEEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH-Hhh
Q psy852 581 YADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG-LSG 658 (891)
Q Consensus 581 ~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG-~~G 658 (891)
..+-+..+.||+++ ....+|+++..++ .+ +.+..... .++ ...+.+.+....+. ...
T Consensus 188 ~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~-~~l~~~~~-------------~~~------~~~~~~~a~~~~l~~~~~ 246 (337)
T 3p1t_A 188 ENELVFRSFSKSYGLAGLRLGALFGPSE-LI-AAMKRKQW-------------FCN------VGTLDLHALEAALDNDRA 246 (337)
T ss_dssp TTEEEEEESSSTTCCTTTCCEEEECCHH-HH-HHHHTTSC-------------TTC------SCHHHHHHHHHHHTCHHH
T ss_pred CCEEEEeeCchhccCcchheEEEEeCHH-HH-HHHHhhcC-------------CCC------CCHHHHHHHHHHhCCHHH
Confidence 34677889999997 4567788776432 22 22211000 000 01122223333332 234
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-E
Q psy852 659 LQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-F 737 (891)
Q Consensus 659 ~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~ 737 (891)
+.+.+++..++++++.+.|++. ++++. ++..+.+.|.... ...+.+.|.+.|+.+..+........+ +
T Consensus 247 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~~~~~~l~~~gi~v~~g~~~~~~~~iRi 315 (337)
T 3p1t_A 247 REAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLVENAA---------GERTLRFLRERGIQVKDAGQFGLHHHIRI 315 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCBC-CCSSSEEEEECTT---------THHHHHHHHHTTEECEEGGGGTCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-cCEEC-CCCCeEEEEEcCC---------HHHHHHHHHHCCeEEEECccCCCCCeEEE
Confidence 6777788888899999999887 67654 4556777777642 245677888899886655555444566 8
Q ss_pred EecCCCCHHHHHHHHHHHHHHH
Q psy852 738 ELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 738 sv~~~tT~edId~li~~L~ei~ 759 (891)
+++ +++|+++++++|+++.
T Consensus 316 s~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 316 SIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp ECC---CHHHHHHHHHHHHHHT
T ss_pred ecC---CHHHHHHHHHHHHHHh
Confidence 876 7999999999998764
No 289
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=98.61 E-value=1.1e-06 Score=96.84 Aligned_cols=261 Identities=8% Similarity=-0.011 Sum_probs=155.1
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+.+.+++.+...+.=.++ +++|+++++..++.+... +.-.|++....|.+...++...|
T Consensus 68 l~~~la~~~~~~~~~~v~--~~~g~~~a~~~~~~~l~~-------------------~gd~Vl~~~~~~~~~~~~~~~~g 126 (375)
T 3op7_A 68 FKKSVSQLYTGVKPEQIL--QTNGATGANLLVLYSLIE-------------------PGDHVISLYPTYQQLYDIPKSLG 126 (375)
T ss_dssp HHHHHHTTSSSCCGGGEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESSCTHHHHHHHHTT
T ss_pred HHHHHHHHhccCChhhEE--EcCChHHHHHHHHHHhcC-------------------CCCEEEEeCCCchhHHHHHHHcC
Confidence 334444544322222455 678999999988765411 12357888888988888888889
Q ss_pred ceEEEecCCC--CCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hcCC-------
Q psy852 528 VRLKILEPDD--KNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQGI------- 579 (891)
Q Consensus 528 v~v~~Vp~d~--~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ldGi------- 579 (891)
.+++.+|.+. ++.+|+++|++++++.+ ..++++ +..|.+. |.++ +|.+
T Consensus 127 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~ 202 (375)
T 3op7_A 127 AEVDLWQIEEENGWLPDLEKLRQLIRPTT----KMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL 202 (375)
T ss_dssp CEEEEEEEEGGGTTEECHHHHHHHCCTTC----CEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred CEEEEEeccccCCCCCCHHHHHHhhccCC----eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence 9999998863 45699999999997532 223333 2344443 3331 2221
Q ss_pred --------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 580 --------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 580 --------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
...+-...+.+|.++.| ..+|+++. +++ +.+.+.....+ ++.. . ..+.+++.
T Consensus 203 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~-l~~~~~~~~~~-------------~~~~-~---~~~~~~~~ 263 (375)
T 3op7_A 203 DVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQ-VTDILRDYRDY-------------TMIC-A---GVFDDLVA 263 (375)
T ss_dssp CCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEEC-CHH-HHHHHTTTGGG-------------TTSC-C---CHHHHHHH
T ss_pred CCCchhhhcCCEEEEeEChhhcCCcccceEEEEe-CHH-HHHHHHHHHhh-------------hccC-C---CcHHHHHH
Confidence 11235677899999845 56788887 333 22222211110 0110 0 12222333
Q ss_pred HHHHH--HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHH-HhCCcEEEee
Q psy852 651 IRTYG--LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDI-NASGRLHMVP 727 (891)
Q Consensus 651 L~~lG--~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L-~~~G~~~~s~ 727 (891)
...+. ...+++..+...++++++.+.|++.+++++..+.....+.+.+... ....++.+.| .+.|+.+..+
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~gi~v~~g 337 (375)
T 3op7_A 264 QLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD------MPMEDFCLQLLQEHGVLLVPG 337 (375)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS------SCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC------CCHHHHHHHHHHhCCEEEeCh
Confidence 32222 2334555666688899999999988888877554444445555321 2345677777 5789886555
Q ss_pred ccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 728 ASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 728 s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
........+ ++++. +.++|+++++.|++.+.
T Consensus 338 ~~~~~~~~iRi~~~~--~~~~i~~~l~~l~~~l~ 369 (375)
T 3op7_A 338 NRFERDGYVRLGFAC--EQETLIKGLEKLSQFLR 369 (375)
T ss_dssp GGGTCTTEEEECCCS--CHHHHHHHHHHHHHHHG
T ss_pred hhhCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 544444556 77653 45899999999988763
No 290
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=98.60 E-value=9.7e-07 Score=98.62 Aligned_cols=91 Identities=15% Similarity=0.134 Sum_probs=73.5
Q ss_pred EEecCCCChHHHHHHHHcCCe-EEEEecC--CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc---cCHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVR-LKILEPD--DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIG 218 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~-v~~V~~d--~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~ 218 (891)
|++..-+|.+....+...+.+ ++.++.+ +++.+|+++|++.+++. +..+.+|+.+..+|.||.+ +++++|+
T Consensus 133 Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~ 209 (412)
T 1ajs_A 133 VYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIA 209 (412)
T ss_dssp EEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred EEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHH
Confidence 667777888888888777788 9999984 56889999999999753 1124677788899999999 4566899
Q ss_pred HHHHHcCCceeeeccccCCc
Q psy852 219 PVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG~~ 238 (891)
++|+++|+++++|.+|.++.
T Consensus 210 ~~~~~~~~~li~De~y~~~~ 229 (412)
T 1ajs_A 210 SVMKRRFLFPFFDSAYQGFA 229 (412)
T ss_dssp HHHHHHTCEEEEEESCTTTT
T ss_pred HHHHHCCCEEEEEccccccc
Confidence 99999999999999986543
No 291
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=98.57 E-value=7.7e-07 Score=97.97 Aligned_cols=235 Identities=8% Similarity=0.088 Sum_probs=147.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+++ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+| +|
T Consensus 91 ~v~--~~~g~~~a~~~~~~~~~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~------~d 143 (370)
T 2z61_A 91 NII--ITGGSSLGLFFALSSIID-------------------DGDEVLIQNPCYPCYKNFIRFLGAKPVFCD------FT 143 (370)
T ss_dssp GEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEESSCCTHHHHHHHHTTCEEEEEC------SS
T ss_pred hEE--ECCChHHHHHHHHHHhcC-------------------CCCEEEEeCCCchhHHHHHHHcCCEEEEeC------CC
Confidence 455 788999999988876521 112578888889999998888888988888 89
Q ss_pred HHHHHHHHHhhhhcCCccEEEE---ecCCccc-------hhhh--------------hc----------CCCCccEEEEc
Q psy852 543 GATLRQVMQQDETMGYIPFFVS---TTLGTTS-------CYRK--------------SQ----------GIEYADSFNVN 588 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-------c~~~--------------ld----------Gi~~aDSIs~d 588 (891)
+++|++++++.. ..++++ +..|.+. |.++ .+ +....|.+..+
T Consensus 144 ~~~l~~~l~~~~----~~v~~~~p~nptG~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s 219 (370)
T 2z61_A 144 VESLEEALSDKT----KAIIINSPSNPLGEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILING 219 (370)
T ss_dssp HHHHHHHCCSSE----EEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEE
T ss_pred HHHHHHhcccCc----eEEEEcCCCCCcCcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEec
Confidence 999999886521 122333 2245442 3321 11 12245788999
Q ss_pred CcccCCcc-cccEEEEEeCCccchhhhcc-CCCccccCCCCCccccCCcccccccccchHHHHHHHHH---HHhhHHHHH
Q psy852 589 VNKWLLTA-FDSSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY---GLSGLQKYI 663 (891)
Q Consensus 589 ~HK~L~~P-~g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l---G~~G~~~~i 663 (891)
+||+++.| ..+|+++.+++ +.+.+.. ...+ .++ ...+.++++...+ +.+.+++..
T Consensus 220 ~sK~~~~~G~r~G~~~~~~~--~~~~~~~~~~~~------------~~~------~~~~~~~a~~~~l~~~~~~~~~~~~ 279 (370)
T 2z61_A 220 FSKLYAMTGWRIGYVISNDE--IIEAILKLQQNL------------FIS------APTISQYAALKAFEKETEREINSMI 279 (370)
T ss_dssp STTTTTCGGGCCEEEECCHH--HHHHHHHHHHHH------------TSS------SCHHHHHHHGGGGSHHHHHHHHHHH
T ss_pred ChhccCCccceEEEEEECHH--HHHHHHHHHhhc------------ccC------CCHHHHHHHHHHHhccCHHHHHHHH
Confidence 99999744 34888887663 2222211 0000 001 1122233333333 455677778
Q ss_pred HHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeecccc--CCeEE-EEe
Q psy852 664 RRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQE--QNDEV-FEL 739 (891)
Q Consensus 664 ~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~~--g~~~l-~sv 739 (891)
++..++++++.+.|++. ++++..+.....+.+++.+ ...++.+.|. +.|+.+..+.... +...+ +++
T Consensus 280 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~ 350 (370)
T 2z61_A 280 KEFDRRRRLVLKYVKDF-GWEVNNPIGAYYVFPNIGE--------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISY 350 (370)
T ss_dssp HHHHHHHHHHHHHHHHT-TCBCCCCCBTTEECCBCSS--------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEEC
T ss_pred HHHHHHHHHHHHHHHHc-CCeecCCCcceEEEEecCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEE
Confidence 88889999999999887 7776543333344455532 3457888886 6798755443322 24456 888
Q ss_pred cCCCCHHHHHHHHHHHHHHH
Q psy852 740 QERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 740 ~~~tT~edId~li~~L~ei~ 759 (891)
+ +++++|+++++.|++..
T Consensus 351 ~--~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 351 A--NSYENIKEGLERIKEFL 368 (370)
T ss_dssp C--SCHHHHHHHHHHHHHHH
T ss_pred e--CCHHHHHHHHHHHHHHH
Confidence 7 69999999999988764
No 292
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=98.57 E-value=4.8e-06 Score=93.80 Aligned_cols=91 Identities=10% Similarity=-0.094 Sum_probs=64.8
Q ss_pred EEEecCCCChHHHHHHHHcC-------------CeEEEEecC------CCCcccHHHHHHHHHhhhhcCCcceEEEeecc
Q psy852 144 MAYCSKEAHSCVEKAAMMAF-------------VRLKILEPD------DKNSLRGATLRQVMQQDETMGYIPFFVSTTLG 204 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~-------------~~v~~V~~d------~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~G 204 (891)
+++....-|.+..-++.+.+ ..+..++++ ..+.+|+++|++.+++.. ..+.+|+++-.
T Consensus 137 vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~ 213 (429)
T 1s0a_A 137 FLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR---HEIAAVIIEPI 213 (429)
T ss_dssp EEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT---TTEEEEEECSS
T ss_pred EEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC---CCEEEEEEeec
Confidence 44455566766554443321 145667664 235799999999997521 12457777777
Q ss_pred -cCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 205 -TTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 205 -tt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
++.+|.+.| +++|+++|+++|++||+|.+|.|+
T Consensus 214 ~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 251 (429)
T 1s0a_A 214 VQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGF 251 (429)
T ss_dssp EECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC
Confidence 889998777 999999999999999999999664
No 293
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=98.56 E-value=2.2e-06 Score=94.22 Aligned_cols=55 Identities=15% Similarity=0.144 Sum_probs=47.0
Q ss_pred ccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 177 LRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 177 id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+|+++|+++++++ +.+|+++..++.+|.+.| +++|+++|+++|+++++|.+++|+
T Consensus 160 ~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 218 (375)
T 2eh6_A 160 NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGI 218 (375)
T ss_dssp TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCC
Confidence 4899999887643 457777888999999988 999999999999999999999763
No 294
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=98.56 E-value=8.3e-07 Score=98.58 Aligned_cols=244 Identities=11% Similarity=0.024 Sum_probs=149.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccc-eEEEecccchHHHHHHHHHcCceEEEecCCC-CCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSK-LMAYCSKEAHSCVEKAAMMAFVRLKILEPDD-KNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~-~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~-~G~ 540 (891)
+|+ +++|+++++..++.+... +. -.|++..-.|.+...++...|.+++.+|.++ ++.
T Consensus 101 ~i~--~~~g~~~al~~~~~~l~~-------------------~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~ 159 (398)
T 3ele_A 101 NLY--MTMGAAASLSICFRALTS-------------------DAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQ 159 (398)
T ss_dssp GEE--EESSHHHHHHHHHHHHCC-------------------STTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSS
T ss_pred HEE--EccCHHHHHHHHHHHHcC-------------------CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCc
Confidence 566 788999999988776411 11 3477778889999999888999999999975 468
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhh------h-----hc---------C--------
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYR------K-----SQ---------G-------- 578 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~------~-----ld---------G-------- 578 (891)
+|+++|++++++.++ .++++ +..|++. |.+ + +| |
T Consensus 160 ~d~~~l~~~l~~~~~----~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 235 (398)
T 3ele_A 160 IDFDALEERINAHTR----GVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTK 235 (398)
T ss_dssp CCHHHHHHTCCTTEE----EEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred CCHHHHHHHhCcCCC----EEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHh
Confidence 999999999875321 22222 2245443 433 2 11 1
Q ss_pred CCCccEEEEcCcccCC-cccccEEEEEeCCccc----hhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHH
Q psy852 579 IEYADSFNVNVNKWLL-TAFDSSCLWVADRYKL----TSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRT 653 (891)
Q Consensus 579 i~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L----~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~ 653 (891)
....+-+..+.||+++ ....+|+++.++.... ...+.. +.... ...+ ...+.+++....
T Consensus 236 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~------~~~~~~~a~~~~ 299 (398)
T 3ele_A 236 YYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCG---AGRAL-------GYVC------APSLFQKMIVKC 299 (398)
T ss_dssp TCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHH---HHHHT-------TCCC------SCHHHHHHHTTC
T ss_pred hcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHH---Hhhhc-------cccC------CCHHHHHHHHHH
Confidence 1112466778999997 4577899988766211 111100 00000 0000 001222222222
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCC
Q psy852 654 YGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQN 733 (891)
Q Consensus 654 lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~ 733 (891)
+.... ..++..++++++.+.|++. ++++..+.....+++++++. ....+.+.|.+.|+.+..+......
T Consensus 300 l~~~~---~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~~~~~ 368 (398)
T 3ele_A 300 QGATG---DINAYKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKALED-------DSNAFCEKAKEEDVLIVAADGFGCP 368 (398)
T ss_dssp TTCCC---CHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECSSS-------CHHHHHHHHHTTTEECEESGGGTCT
T ss_pred hcCHH---HHHHHHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEcCCC-------CHHHHHHHHHHCCEEEeCccccCCC
Confidence 21111 2345566778888888775 66766544444477777532 3567888888899886655555445
Q ss_pred eEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 734 DEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 734 ~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..+ ++++ +++++|+++++.|++++.
T Consensus 369 ~~iRis~~--~~~e~i~~~l~~l~~~l~ 394 (398)
T 3ele_A 369 GWVRISYC--VDREMIKHSMPAFEKIYK 394 (398)
T ss_dssp TEEEEECC--SCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 566 8875 699999999999998763
No 295
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=98.56 E-value=7.6e-07 Score=96.46 Aligned_cols=248 Identities=9% Similarity=0.050 Sum_probs=140.7
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH---
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM--- 524 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~--- 524 (891)
+.+.+++.+.. + +.+ +.++|++++..++.+.. + +...|+++..+|.+...++.
T Consensus 3 l~~~la~~~g~-~--~~i--~~~sG~~a~~~~~~~~~----~---------------~g~~v~~~~~~~~~~~~~~~~~~ 58 (331)
T 1pff_A 3 LEGKIAKLEHA-E--ACA--ATASGMGAIAASVWTFL----K---------------AGDHLISDDCLYGCTHALFEHQL 58 (331)
T ss_dssp HHHHHHHHHTC-S--EEE--EESSHHHHHHHHHHHHC----C---------------TTCEEEEESCCCHHHHHHHHTHH
T ss_pred HHHHHHHHhCC-C--eEE--EeCChHHHHHHHHHHhc----C---------------CCCEEEEcCCCcchHHHHHHHHH
Confidence 33455555554 2 222 33455899888876541 0 12247888889988877653
Q ss_pred -HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhh-h-----hcCC-------
Q psy852 525 -MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYR-K-----SQGI------- 579 (891)
Q Consensus 525 -l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~-~-----ldGi------- 579 (891)
..|++++.+|. +|+++|+++|++++ ..+++.. ..|... |.+ + +|.+
T Consensus 59 ~~~g~~~~~~~~-----~d~~~l~~~i~~~~----~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~ 129 (331)
T 1pff_A 59 RKFGVEVDFIDM-----AVPGNIEKHLKPNT----RIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILT 129 (331)
T ss_dssp HHTTCEEEEECT-----TSTTHHHHTCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHC
T ss_pred HhcCCEEEEeCC-----CCHHHHHHhhcCCC----eEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccC
Confidence 46888888876 47888988886432 1222222 234443 544 3 2221
Q ss_pred ----CCccEEEEcCcccCCcccc--cEEEEEeCCccchhhhcc-CCCccccCCCCCccccCCcccccccccchHHHHHHH
Q psy852 580 ----EYADSFNVNVNKWLLTAFD--SSCLWVADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIR 652 (891)
Q Consensus 580 ----~~aDSIs~d~HK~L~~P~g--~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~ 652 (891)
..+|.+..++||++++|.+ +|+++.++++.+. .+.. ...| ++ -....+..|..+.
T Consensus 130 ~~~~~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~-~l~~~~~~~-------------~~----~~~~~~~~~~~~~ 191 (331)
T 1pff_A 130 NPLDLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAK-VKSQGIKDI-------------TG----AIISPHDAWLITR 191 (331)
T ss_dssp CGGGGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHH-HHHTCCCCC-------------CC----CCCCHHHHHHHHH
T ss_pred ChhhcCCcEEEEECccccCCCCCceEEEEEeCcHHHHH-HHHHHHHhh-------------cC----CCCCHHHHHHHHc
Confidence 2479999999999999987 7888887633222 2211 1110 00 0111233444333
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHhccC--------------CCcEEeCC---CceeEEEEEecCCcchhhhhhHHHHHH
Q psy852 653 TYGLSGLQKYIRRHCELAKLFEGKVRRD--------------PRFEISND---VRLGLVCFRLRSENNLIADQNNRKLLE 715 (891)
Q Consensus 653 ~lG~~G~~~~i~~~~~lA~~L~~~L~~~--------------~~~eil~~---~~~~iV~Fr~~~~~~~~~d~ln~~L~~ 715 (891)
.+ +.+....++..++++.+.+.|++. +++++..+ ...++++|.+.+ .+.+..
T Consensus 192 ~l--~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 260 (331)
T 1pff_A 192 GT--LTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG---------LEKAKK 260 (331)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS---------HHHHHH
T ss_pred Cc--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---------HHHHHH
Confidence 22 223333444444555555544432 33333221 135789999851 245677
Q ss_pred HHHhCCcEEEeec-----------c-------------c--cCCeEE-EEecCCCCHHHHHHHHHHHHH
Q psy852 716 DINASGRLHMVPA-----------S-------------Q--EQNDEV-FELQERKRKDDLAYKRSFFVR 757 (891)
Q Consensus 716 ~L~~~G~~~~s~s-----------~-------------~--~g~~~l-~sv~~~tT~edId~li~~L~e 757 (891)
.|.+.|++....+ . . .....+ ++++..+|+++|+.++++|++
T Consensus 261 ~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 261 VLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp HHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred HHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 7888888543221 0 0 113567 999999999999999998875
No 296
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.55 E-value=9.4e-07 Score=100.14 Aligned_cols=232 Identities=12% Similarity=0.129 Sum_probs=131.7
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH----
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA---- 523 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa---- 523 (891)
+.+.+++.+... . .++ .++|++++..++.+.. + +.-.|+++..+|.+...++
T Consensus 63 l~~~la~~~g~~-~-~v~---~~sGt~A~~~~l~~~~----~---------------~gd~vi~~~~~~~~~~~~~~~~~ 118 (421)
T 2ctz_A 63 LEKRLAALEGGK-A-ALA---TASGHAAQFLALTTLA----Q---------------AGDNIVSTPNLYGGTFNQFKVTL 118 (421)
T ss_dssp HHHHHHHHHTCS-E-EEE---ESSHHHHHHHHHHHHC----C---------------TTCEEEECSCCCHHHHHHHHTHH
T ss_pred HHHHHHHHhCCC-c-eEE---ecCHHHHHHHHHHHHh----C---------------CCCEEEEeCCCchHHHHHHHHHH
Confidence 334455555442 2 233 3456999988876641 0 1235888999999888776
Q ss_pred HHcCceEEEe-cCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------hhhh-----hcCC-------
Q psy852 524 MMAFVRLKIL-EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------CYRK-----SQGI------- 579 (891)
Q Consensus 524 ~l~gv~v~~V-p~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c~~~-----ldGi------- 579 (891)
...|++++.+ |.+ |+++|+++|++.++ .+++... .|... |+++ +|++
T Consensus 119 ~~~g~~~~~~~~~~-----d~~~l~~~i~~~~~----~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~ 189 (421)
T 2ctz_A 119 KRLGIEVRFTSREE-----RPEEFLALTDEKTR----AWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYL 189 (421)
T ss_dssp HHTTCEEEECCTTC-----CHHHHHHHCCTTEE----EEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTS
T ss_pred HHcCCEEEEECCCC-----CHHHHHHhhccCCe----EEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccc
Confidence 4578899998 775 89999999876321 2222222 34333 4331 2221
Q ss_pred -----CCccEEEEcCcccCCcccc-cEEEEEeCC-ccc----hhhhc-cCCCccccCCCCCccccCC-------c-cccc
Q psy852 580 -----EYADSFNVNVNKWLLTAFD-SSCLWVADR-YKL----TSALV-VDPLYLQHGHEGAIDYRHW-------G-IPLS 639 (891)
Q Consensus 580 -----~~aDSIs~d~HK~L~~P~g-~G~llvR~~-~~L----~~~l~-~~~~Yl~~~~e~~~~~~~~-------t-i~~S 639 (891)
..+|.+.+++||++++|.+ +|.++++++ ..+ .+.+. ....|........+....+ . ...+
T Consensus 190 ~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g 269 (421)
T 2ctz_A 190 LRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQG 269 (421)
T ss_dssp CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHC
T ss_pred CCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcC
Confidence 1379999999999999874 788888632 111 11111 1111110000000000000 0 0011
Q ss_pred ccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCC------------------CceeEEEEEecCC
Q psy852 640 RRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISND------------------VRLGLVCFRLRSE 701 (891)
Q Consensus 640 Rr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~------------------~~~~iV~Fr~~~~ 701 (891)
-....+..|+.++ |.+.+..++++..++++++.+.|++.|+++++.. ...++++|.+.+.
T Consensus 270 ~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~ 347 (421)
T 2ctz_A 270 QALGPFEAWVVLL--GMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGG 347 (421)
T ss_dssp CCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTH
T ss_pred CCCCHHHHHHHHc--CcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCC
Confidence 1223445555543 5666777888888999999999999999987631 2357999999642
Q ss_pred cchhhhhhHHHHHHHHHh
Q psy852 702 NNLIADQNNRKLLEDINA 719 (891)
Q Consensus 702 ~~~~~d~ln~~L~~~L~~ 719 (891)
......+.+.|..
T Consensus 348 -----~~~~~~~~~~l~~ 360 (421)
T 2ctz_A 348 -----YEAAKRFISRLKL 360 (421)
T ss_dssp -----HHHHHHHHHTCSS
T ss_pred -----HHHHHHHHHhCCc
Confidence 1233455555543
No 297
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=98.54 E-value=1.1e-06 Score=96.56 Aligned_cols=83 Identities=14% Similarity=-0.004 Sum_probs=67.4
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|++..-+|.+....+...|.+++.++.++++.+ ++|++.+ .+-+|+++..+|.+|.+-|+++|.++|++
T Consensus 108 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 177 (360)
T 3hdo_A 108 EIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--AGFPERY--------EGKVFFLTTPNAPLGPSFPLEYIDELARR 177 (360)
T ss_dssp EEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--TTCCSSB--------CSSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--HHHHhhc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHH
Confidence 3777788999998888777889999999888776 4443221 12367777889999999999999999999
Q ss_pred cCCceeeeccccC
Q psy852 224 FDVWLHVDGAYAG 236 (891)
Q Consensus 224 ~~~~lHvDaA~GG 236 (891)
+|+++++|.+|++
T Consensus 178 ~~~~li~De~~~~ 190 (360)
T 3hdo_A 178 CAGMLVLDETYAE 190 (360)
T ss_dssp BSSEEEEECTTGG
T ss_pred CCCEEEEECChHh
Confidence 9999999999964
No 298
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=98.53 E-value=1.5e-06 Score=96.44 Aligned_cols=244 Identities=10% Similarity=0.003 Sum_probs=148.5
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC--CCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD--KNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~--~G~ 540 (891)
+|+ +++|+++++..++.+.-. +.-.|+++.-.|.+...++...|.+++.+|.++ ++.
T Consensus 93 ~i~--~t~g~~~al~~~~~~l~~-------------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 151 (385)
T 1b5p_A 93 ETI--VTVGGSQALFNLFQAILD-------------------PGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFV 151 (385)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTC
T ss_pred HEE--EcCChHHHHHHHHHHhcC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCC
Confidence 455 788999999888765411 122477777788888888888899999999975 468
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hcCC--------C---------CccE
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQGI--------E---------YADS 584 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ldGi--------~---------~aDS 584 (891)
+|+++|+++|++.+ ..++++. ..|++. |.++ .|.+ + ..+-
T Consensus 152 ~d~~~l~~~l~~~~----~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i 227 (385)
T 1b5p_A 152 PDPERVRRAITPRT----KALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTL 227 (385)
T ss_dssp CCHHHHHTTCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEE
T ss_pred CCHHHHHHhcCCCC----EEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEE
Confidence 99999999886531 1223322 256653 3331 1110 1 1234
Q ss_pred EEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH-----HHhh
Q psy852 585 FNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY-----GLSG 658 (891)
Q Consensus 585 Is~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l-----G~~G 658 (891)
+..+++|+++.| ..+|+++.+++ +.+.+.....+ ..++ ...+.++++...+ +.+.
T Consensus 228 ~~~s~SK~~~~~G~RiG~~~~~~~--~~~~l~~~~~~-----------~~~~------~~~~~~~a~~~~l~~~~~~~~~ 288 (385)
T 1b5p_A 228 TVNGAAKAFAMTGWRIGYACGPKE--VIKAMASVSRQ-----------STTS------PDTIAQWATLEALTNQEASRAF 288 (385)
T ss_dssp EEEESTTTTTCGGGCCEEEECCHH--HHHHHHHHHHT-----------TTCS------CCHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEechhhcCCcccceEEEEeCHH--HHHHHHHHHhh-----------ccCC------CCHHHHHHHHHHHhCCCcchHH
Confidence 566899998755 33899887542 22222110000 0000 1123344443333 3455
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-E
Q psy852 659 LQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-F 737 (891)
Q Consensus 659 ~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~ 737 (891)
+++..++..+.++++.+.|++. ++++..+.....+...+... +....++.+.|.+.|+.+..+........+ +
T Consensus 289 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRi 362 (385)
T 1b5p_A 289 VEMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPI-----APDEVRAAERLLEAGVAVVPGTDFAAFGHVRL 362 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSBTTEEEEECTTT-----CSSHHHHHHHHHHTTEECEESGGGTCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecCCC-----CCCHHHHHHHHHHCCeEEecccccCCCCeEEE
Confidence 6677778888899999999887 77765443333444555321 123567888888889886655544324456 8
Q ss_pred EecCCCCHHHHHHHHHHHHHH
Q psy852 738 ELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 738 sv~~~tT~edId~li~~L~ei 758 (891)
++. +++++|+++++.|++.
T Consensus 363 s~~--~~~~~i~~~l~~l~~~ 381 (385)
T 1b5p_A 363 SYA--TSEENLRKALERFARV 381 (385)
T ss_dssp ECC--SCHHHHHHHHHHGGGG
T ss_pred Eec--CCHHHHHHHHHHHHHH
Confidence 876 7888999888877654
No 299
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.52 E-value=2.9e-06 Score=94.07 Aligned_cols=54 Identities=15% Similarity=-0.010 Sum_probs=47.3
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
|+++|++++++. +.+|+++..+|.+|.+.| +++|+++|+++|+++++|.+++|+
T Consensus 171 d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~ 228 (392)
T 3ruy_A 171 DLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGL 228 (392)
T ss_dssp CHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT
T ss_pred cHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCC
Confidence 799999988743 457788779999999999 999999999999999999999654
No 300
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=98.51 E-value=1.3e-06 Score=97.17 Aligned_cols=257 Identities=15% Similarity=0.123 Sum_probs=148.6
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++.+++.+.. + +++ +++||++++..++.+++...... . ..++-+|+.+...|.+...++.+
T Consensus 85 ~~l~~~la~~~g~-~--~v~--~~~gg~~a~~~al~~~~~~~~~~-~----------~~~~~vi~~~~~yh~~~~~~~~~ 148 (397)
T 2ord_A 85 MELAELLSKNTFG-G--KVF--FANTGTEANEAAIKIARKYGKKK-S----------EKKYRILSAHNSFHGRTLGSLTA 148 (397)
T ss_dssp HHHHHHHHHTTTS-C--EEE--EESSHHHHHHHHHHHHHHHHHHH-C----------TTCCEEEEEBTCCCCSSHHHHHH
T ss_pred HHHHHHHHHhcCC-C--eEE--EeCCHHHHHHHHHHHHHHHhhcC-C----------CCCceEEEEcCCcCCCchhhhhc
Confidence 3445556655542 2 445 67899999999988876532210 0 00123566666777777767666
Q ss_pred cCce------------EEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEE---EecCCc-cc-----------hhhh---
Q psy852 526 AFVR------------LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFV---STTLGT-TS-----------CYRK--- 575 (891)
Q Consensus 526 ~gv~------------v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~V---vataGT-T~-----------c~~~--- 575 (891)
.+.+ ++.+|.+ |+++|+++|++.++ .+++ .+..|+ +. |.++
T Consensus 149 ~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~~~----~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~ 219 (397)
T 2ord_A 149 TGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSEDVC----AVFLEPIQGESGIVPATKEFLEEARKLCDEYDAL 219 (397)
T ss_dssp SBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTTEE----EEEECSEECTTTCEECCHHHHHHHHHHHHHHTCE
T ss_pred cCChhhccccCCCCCCeeEecCC-----CHHHHHHHhhcCeE----EEEEecccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 5543 6777763 89999998874211 1222 234576 21 4331
Q ss_pred --hc----CC-------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcc
Q psy852 576 --SQ----GI-------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGI 636 (891)
Q Consensus 576 --ld----Gi-------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti 636 (891)
+| |+ ...|.+++ +|++++++.+|+++.+++. . .+.. . .. ...++
T Consensus 220 li~De~~~~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~r~G~~~~~~~~-~--~l~~--~--~~-------~~~~~- 282 (397)
T 2ord_A 220 LVFDEVQCGMGRTGKLFAYQKYGVVPDVLTT--AKGLGGGVPIGAVIVNERA-N--VLEP--G--DH-------GTTFG- 282 (397)
T ss_dssp EEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECSTT-C--CCCT--T--SS-------CCSST-
T ss_pred EEEEecccCCccCccchhhhhhCCCCCeeee--ccccCCCcCeEEEEEchHh-c--ccCC--C--Cc-------CCCCC-
Confidence 11 11 12577766 7999977889999987652 1 1210 0 00 00111
Q ss_pred cccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC-CcEEe--CCCceeEEEEEecCCcchhhhhhHHHH
Q psy852 637 PLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDP-RFEIS--NDVRLGLVCFRLRSENNLIADQNNRKL 713 (891)
Q Consensus 637 ~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~-~~eil--~~~~~~iV~Fr~~~~~~~~~d~ln~~L 713 (891)
. -.+....+..+|+.+.. ++..++..++++++.+.|++.+ ++.++ .++..++++|++.+. ....++
T Consensus 283 -~-~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~l 351 (397)
T 2ord_A 283 -G-NPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREE------VSNREV 351 (397)
T ss_dssp -T-CHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTT------SCHHHH
T ss_pred -C-CHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECCh------HHHHHH
Confidence 0 01112223334444332 3456677778888888887642 12211 123446788888532 135678
Q ss_pred HHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 714 LEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 714 ~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.+.|.+.|+.+..+ +...+ ++++..++++|++++++.|++++
T Consensus 352 ~~~l~~~gi~v~~~----~~~~iRis~~~~~~~e~i~~~~~~l~~~l 394 (397)
T 2ord_A 352 ATKCFENKLLVVPA----GNNTIRFLPPLTVEYGEIDLAVETLKKVL 394 (397)
T ss_dssp HHHHHHTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEccC----CCCEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence 88888899874433 24456 88877889999999999998775
No 301
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=98.50 E-value=4.1e-06 Score=95.46 Aligned_cols=265 Identities=9% Similarity=-0.006 Sum_probs=148.8
Q ss_pred HHH-HHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH-HHHHH-
Q psy852 447 ELA-KLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC-VEKAA- 523 (891)
Q Consensus 447 elA-r~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S-v~Kaa- 523 (891)
+++ +++++.+.. +...+ ++++|+++|..++.+++. +.-.|+++..+|.+ +....
T Consensus 94 ~~a~~~la~~~g~-~~~~v---~~~sGs~a~~~a~~~~~~-------------------~Gd~Vl~~~~~~~~~~~~~~~ 150 (447)
T 3h7f_A 94 NLARDRAKALFGA-EFANV---QPHSGAQANAAVLHALMS-------------------PGERLLGLDLANGGHLTHGMR 150 (447)
T ss_dssp HHHHHHHHHHHTC-SEEEC---CCSSHHHHHHHHHHHHCC-------------------TTCEEEEECGGGTCCGGGTCT
T ss_pred HHHHHHHHHHcCC-CceEE---EeCCHHHHHHHHHHHhcC-------------------CCCEEEecCcccccccchhhh
Confidence 345 455555543 22222 256778999887766422 11246666666655 21111
Q ss_pred -HH--cCceEEEecCC-CCCCcCHHHHHHHHHhhhhcCCccEEEE-ecCCccc--------hhhh-----hcC-------
Q psy852 524 -MM--AFVRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVS-TTLGTTS--------CYRK-----SQG------- 578 (891)
Q Consensus 524 -~l--~gv~v~~Vp~d-~~G~mD~~~Le~aI~~d~~~g~ip~~Vv-ataGTT~--------c~~~-----ldG------- 578 (891)
.+ ....++.+|.+ +++.+|+++|++++++... ..+++. ...++.. |.++ +|.
T Consensus 151 ~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~---~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~ 227 (447)
T 3h7f_A 151 LNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRP---KVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLV 227 (447)
T ss_dssp TSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCC---SEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHH
T ss_pred hhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCC---eEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhh
Confidence 12 23456677776 5689999999999976321 122332 2223332 4431 121
Q ss_pred --------CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCccccccc-ccchHHH
Q psy852 579 --------IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLW 648 (891)
Q Consensus 579 --------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW 648 (891)
++.+|.++.++||++++|.+ |+++.++. +.+.+. ....+.. ++-. .....+.
T Consensus 228 ~~g~~~~~~~~~di~~~s~sK~l~G~~g-G~i~~~~~--~~~~l~~~~~~~~~---------------~~~~~~~~~a~~ 289 (447)
T 3h7f_A 228 AAGLHPSPVPHADVVSTTVHKTLGGGRS-GLIVGKQQ--YAKAINSAVFPGQQ---------------GGPLMHVIAGKA 289 (447)
T ss_dssp HTTSSCCSTTTCSEEEEESSGGGCCCSC-EEEEECGG--GHHHHHHHHTTTTC---------------SSCCHHHHHHHH
T ss_pred cCCCCCCCCCCCcEEEecCCcCCCCCCe-EEEEECHH--HHHHHhhhcCCccc---------------CCccHHHHHHHH
Confidence 34579999999999988876 77776553 222221 1001100 0000 1122333
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC----CCcEEeCC-CceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcE
Q psy852 649 FVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD----PRFEISND-VRLGLVCFRLRSENNLIADQNNRKLLEDINASGRL 723 (891)
Q Consensus 649 ~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~----~~~eil~~-~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~ 723 (891)
.++.....+++.+..++..++++++.+.|++. ++++++.. ...+.+.+.+.+.+ .....+.+.|.+.|++
T Consensus 290 ~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~ 364 (447)
T 3h7f_A 290 VALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSP-----LDGQAAEDLLHEVGIT 364 (447)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSS-----CCHHHHHHHHHHTTEE
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeE
Confidence 34444444577888899999999999999876 57888753 34566767765431 1234556667777877
Q ss_pred EEe---ec---cccCCeEE-EEecC----CCCHHHHHHHHHHHHHHHH
Q psy852 724 HMV---PA---SQEQNDEV-FELQE----RKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 724 ~~s---~s---~~~g~~~l-~sv~~----~tT~edId~li~~L~ei~~ 760 (891)
... +. .......+ +++.. .++++|++++++.|++++.
T Consensus 365 v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~ 412 (447)
T 3h7f_A 365 VNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALA 412 (447)
T ss_dssp CBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred EecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHh
Confidence 431 10 01111224 65432 4789999999999998764
No 302
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.49 E-value=2.7e-06 Score=95.51 Aligned_cols=269 Identities=9% Similarity=-0.022 Sum_probs=150.7
Q ss_pred HHHHhhccCCccccccCCCCCcchhHH--HHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCc
Q psy852 451 LFEGKVRRDPRFEISNDVRSSASECIF--VCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFV 528 (891)
Q Consensus 451 ~l~~~L~~~~~~eVv~~itsggsean~--~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv 528 (891)
.+++.+...+. +|+ +++|+++++. .++.+..... ... ..++ ....-.|++..-+|......+...|.
T Consensus 78 ~ia~~~~~~~~-~i~--~t~G~~~al~~~~~~~~l~~~~--~g~-~~~~-----~~~gd~Vlv~~p~y~~~~~~~~~~g~ 146 (423)
T 3ez1_A 78 LFAGYLDVKAE-NVL--VWNNSSLELQGLVLTFALLHGV--RGS-TGPW-----LSQTPKMIVTVPGYDRHFLLLQTLGF 146 (423)
T ss_dssp HHHHHTTSCGG-GEE--ECSSCHHHHHHHHHHHHHHTCC--TTC-SSCG-----GGGCCEEEEEESCCHHHHHHHHHHTC
T ss_pred HHHHHhCCChh-hEE--EeCCcHHHHHHHHHHHHHhccC--CCc-cccc-----cCCCCEEEEcCCCcHHHHHHHHHcCC
Confidence 33444443344 666 7889999986 5554432100 000 0000 00023577888889888888888899
Q ss_pred eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE----ecCCccc-----------h-hhh-----hcC---------
Q psy852 529 RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS----TTLGTTS-----------C-YRK-----SQG--------- 578 (891)
Q Consensus 529 ~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv----ataGTT~-----------c-~~~-----ldG--------- 578 (891)
+++.+|.+++| +|+++|+++|++.. +...++++ +..|++. | .++ +|.
T Consensus 147 ~~~~v~~~~~g-~d~~~l~~~l~~~~--~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~ 223 (423)
T 3ez1_A 147 ELLTVDMQSDG-PDVDAVERLAGTDP--SVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVE 223 (423)
T ss_dssp EEEEEEEETTE-ECHHHHHHHHHSCT--TEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCS
T ss_pred EEEeccCCCCC-CCHHHHHHHHhhCC--CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCC
Confidence 99999998776 99999999996211 11122222 2245543 5 432 111
Q ss_pred -----------------CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc
Q psy852 579 -----------------IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR 641 (891)
Q Consensus 579 -----------------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr 641 (891)
....+-+..+.+|+++....+|+++..++ +.+.+.....+ . .-.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~--~~~~~~~~~~~-------------~----~~~ 284 (423)
T 3ez1_A 224 EDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSED--NIRWLSKYLGA-------------Q----SIG 284 (423)
T ss_dssp SSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHH--HHHHHHHHHHH-------------S----CSC
T ss_pred CCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHH--HHHHHHHHHhh-------------h----ccC
Confidence 01123556789998777788898887643 22222110000 0 001
Q ss_pred ccchHHHHHHHHHHH--hhHHHHHH----HHHHH----HHHHHHHhccCC-CcEEeCCCceeEEEEEecCCcchhhhhhH
Q psy852 642 FRSLKLWFVIRTYGL--SGLQKYIR----RHCEL----AKLFEGKVRRDP-RFEISNDVRLGLVCFRLRSENNLIADQNN 710 (891)
Q Consensus 642 ~~aL~lW~~L~~lG~--~G~~~~i~----~~~~l----A~~L~~~L~~~~-~~eil~~~~~~iV~Fr~~~~~~~~~d~ln 710 (891)
...+.+++....+.. ..+.+.++ ...+. .+.|.+.|...+ .+++..+...+.+++++.+. ..
T Consensus 285 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-------~~ 357 (423)
T 3ez1_A 285 PNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-------VA 357 (423)
T ss_dssp CCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-------CH
T ss_pred CCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-------cH
Confidence 122334444444443 33333332 22223 344444454454 46666555566778888642 35
Q ss_pred HHHHHHHHhCCcEEEe-eccc-----cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 711 RKLLEDINASGRLHMV-PASQ-----EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 711 ~~L~~~L~~~G~~~~s-~s~~-----~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+.+.+.|.+.|+.+.. +... .+...+ +++... ++++|+++++.|++++.
T Consensus 358 ~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~ 413 (423)
T 3ez1_A 358 DRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIR 413 (423)
T ss_dssp HHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHH
Confidence 6788888889987544 2222 234566 888655 99999999999998874
No 303
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=98.48 E-value=3.5e-06 Score=94.82 Aligned_cols=92 Identities=13% Similarity=0.004 Sum_probs=75.1
Q ss_pred EEEecCCCChHHHHHHHH-cCCeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMM-AFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~-~~~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~ 218 (891)
.|++..-+|.+....+.. .+.+++.+++++ ++.+|+++|++.+++. +..+.+|+++..+|.+|.+-| +++|+
T Consensus 139 ~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 215 (430)
T 2x5f_A 139 TILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIV 215 (430)
T ss_dssp EEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred EEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHH
Confidence 377778889999888877 788999999876 4689999999999762 122456666777999999998 88999
Q ss_pred HHHHH-----cCCceeeeccccCCc
Q psy852 219 PVAKE-----FDVWLHVDGAYAGSS 238 (891)
Q Consensus 219 ~i~~~-----~~~~lHvDaA~GG~~ 238 (891)
++|++ +|+++++|.+|+++.
T Consensus 216 ~~~~~~~~~~~~~~li~De~~~~~~ 240 (430)
T 2x5f_A 216 EAIKALANKGTKVIAVVDDAYYGLF 240 (430)
T ss_dssp HHHHHHHHTTCEEEEEEECTTTTCB
T ss_pred HHHHhhhhccCCEEEEEehhccccc
Confidence 99999 999999999996543
No 304
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=98.48 E-value=2.4e-06 Score=93.79 Aligned_cols=246 Identities=12% Similarity=0.064 Sum_probs=150.2
Q ss_pred HHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCce
Q psy852 450 KLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVR 529 (891)
Q Consensus 450 r~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~ 529 (891)
+.+++.+...+. +++ +++|+++++..++.+... +.-.|++..-.|.+...++...|.+
T Consensus 72 ~~la~~~g~~~~-~i~--~t~g~~~al~~~~~~l~~-------------------~gd~Vl~~~p~~~~~~~~~~~~g~~ 129 (360)
T 3hdo_A 72 EVAGELYGFDPS-WII--MANGSDEVLNNLIRAFAA-------------------EGEEIGYVHPSYSYYGTLAEVQGAR 129 (360)
T ss_dssp HHHHHHHTCCGG-GEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEESSSCTHHHHHHHHHTCE
T ss_pred HHHHHHhCcCcc-eEE--EcCCHHHHHHHHHHHHhC-------------------CCCEEEEcCCChHHHHHHHHHCCCE
Confidence 344444443233 566 788999999988765311 1124777888888888888888999
Q ss_pred EEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCC--------------
Q psy852 530 LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGI-------------- 579 (891)
Q Consensus 530 v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi-------------- 579 (891)
++.+|.++++.+ ++|++.++ ...++++. ..|++. |.++ +|.+
T Consensus 130 ~~~v~~~~~~~~--~~l~~~~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~ 201 (360)
T 3hdo_A 130 VRTFGLTGDFRI--AGFPERYE------GKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVR 201 (360)
T ss_dssp EEEECBCTTSSB--TTCCSSBC------SSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHH
T ss_pred EEEeeCCCCCCH--HHHHhhcC------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhc
Confidence 999999887766 33332211 11222222 235443 3221 1111
Q ss_pred -CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH-
Q psy852 580 -EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG- 655 (891)
Q Consensus 580 -~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG- 655 (891)
...+-+..++||+++.| ..+|+++.. ++ +.+.+. .... ++ ...+.+++....+.
T Consensus 202 ~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~-~~~~~~~~~~~--------------~~------~~~~~~~a~~~~l~~ 259 (360)
T 3hdo_A 202 RHENVVVTRTLSKSYSLAGMRIGLAIAR-PE-VIAALDKIRDH--------------YN------LDRLAQAACVAALRD 259 (360)
T ss_dssp HCSSEEEEEESTTTTSCTTSCCEEEECC-HH-HHHHHHHHSCS--------------CC------SCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecchHhhcCCccceeeEeeC-HH-HHHHHHHhCCC--------------CC------CCHHHHHHHHHHhcC
Confidence 11235567999998744 668888773 32 222221 1110 11 12233334333333
Q ss_pred HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeE
Q psy852 656 LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDE 735 (891)
Q Consensus 656 ~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~ 735 (891)
.+.+.+..++..++++++.+.|++. ++++. ++..+.+.|++.+. ...++.+.|.+.|+.+..+........
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~~~~ 330 (360)
T 3hdo_A 260 QAYLSECCRRIRETREWFTTELRSI-GYDVI-PSQGNYLFATPPDR-------DGKRVYDGLYARKVLVRHFSDPLLAHG 330 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECTTC-------CHHHHHHHHHHTTEECBCCCSTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-CCCccEEEEECCCC-------CHHHHHHHHHHCCEEEEECCCCCCCCE
Confidence 3346788888899999999999987 78775 45666777877533 356788889999987443332223345
Q ss_pred E-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 736 V-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 736 l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+ ++++ +++|+|+++++|+++.
T Consensus 331 iRis~~---~~~e~~~l~~al~~~~ 352 (360)
T 3hdo_A 331 MRISIG---TREEMEQTLAALKEIG 352 (360)
T ss_dssp EEEECC---CHHHHHHHHHHHHHHH
T ss_pred EEEEcC---CHHHHHHHHHHHHHHh
Confidence 5 8876 8999999999999875
No 305
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.48 E-value=1.8e-06 Score=95.58 Aligned_cols=91 Identities=10% Similarity=-0.010 Sum_probs=73.9
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEecC--CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEPD--DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGP 219 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~d--~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~ 219 (891)
|++..-+|++....+...+.+++.++.+ +++.+|+++|++.+++.. ..+.+++.+..+|.||.+-| +++|++
T Consensus 123 Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~ 199 (396)
T 2q7w_A 123 VWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQ---AGDVVLFHGCCHNPTGIDPTLEQWQTLAQ 199 (396)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 6667778888888887778899999986 678899999999987531 12467888899999999865 557999
Q ss_pred HHHHcCCceeeeccccCCc
Q psy852 220 VAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG~~ 238 (891)
+|+++|+++++|.+|+++.
T Consensus 200 ~~~~~~~~li~De~~~~~~ 218 (396)
T 2q7w_A 200 LSVEKGWLPLFDFAYQGFA 218 (396)
T ss_dssp HHHHHTCEEEEEESCTTSS
T ss_pred HHHHCCCEEEEeccccccc
Confidence 9999999999999996543
No 306
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=98.48 E-value=2.5e-05 Score=87.01 Aligned_cols=143 Identities=14% Similarity=0.157 Sum_probs=86.2
Q ss_pred cccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCcccchhHHHHHHHHHHHHhcc
Q psy852 49 WAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQK 128 (891)
Q Consensus 49 ~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~ 128 (891)
|...+...++.+.+.+++.+..|++.+. +.+ .+|+||+...++.+..+ ...
T Consensus 71 y~~~~g~~~lr~~ia~~~~~~~g~~~~~-------------~~i--------------~~t~G~t~al~~~~~~l-~~~- 121 (417)
T 3g7q_A 71 YDGPQGKTALLNALAVLLRETLGWDIEP-------------QNI--------------ALTNGSQSAFFYLFNLF-AGR- 121 (417)
T ss_dssp TTCTTSHHHHHHHHHHHHHHHHCCCCCG-------------GGE--------------EEESCHHHHHHHHHHHH-SBC-
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCCc-------------ccE--------------EEeCCcHHHHHHHHHHH-cCC-
Confidence 3334456688888999998888876431 111 14567764433332222 111
Q ss_pred ccCCccccccccCCeEEEec-CCCChHHHHHHH-H-----cCCeEEEEecCC-CCcccHHHHHHHHHhhhhcCCcceEEE
Q psy852 129 KIHPFVDEGVLLSKLMAYCS-KEAHSCVEKAAM-M-----AFVRLKILEPDD-KNSLRGATLRQVMQQDETMGYIPFFVS 200 (891)
Q Consensus 129 ~~~~~~~~g~~~~~~~v~~S-~~~H~Sv~kaa~-~-----~~~~v~~V~~d~-~g~id~~~L~~~l~~~~~~g~~p~~V~ 200 (891)
+. .| .+-.|+++ .-+|.....++. . .+..+..++.+. .+.+|+++|+ +.+. +.+|+
T Consensus 122 gd-----~~---~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~------~~~v~ 185 (417)
T 3g7q_A 122 RA-----DG---STKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGEE------TGMIC 185 (417)
T ss_dssp ------------CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTT------EEEEE
T ss_pred Cc-----cC---CcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cccC------ceEEE
Confidence 00 00 01136665 555555544442 1 123445555442 4578999988 3322 45788
Q ss_pred eecccCccccccC---HHHHHHHHHHcCCceeeeccccC
Q psy852 201 TTLGTTSCCSFDN---LAEIGPVAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 201 ~t~Gtt~~GavDp---l~~I~~i~~~~~~~lHvDaA~GG 236 (891)
++..+|.+|.+-| +++|+++|+++|+++++|.+|+.
T Consensus 186 ~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~ 224 (417)
T 3g7q_A 186 VSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGV 224 (417)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCT
T ss_pred ECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence 8888999999988 88999999999999999999953
No 307
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=98.47 E-value=1.7e-06 Score=97.28 Aligned_cols=253 Identities=10% Similarity=0.026 Sum_probs=152.9
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC-----
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD----- 537 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~----- 537 (891)
+|+ +++|+++++..++.+... +.-.|++..-.|.+...++...|.+++.+|.+.
T Consensus 103 ~v~--~~~g~~~a~~~~~~~~~~-------------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (429)
T 1yiz_A 103 EVL--VTVGAYEALYATIQGHVD-------------------EGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGG 161 (429)
T ss_dssp SEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSS
T ss_pred CEE--EecChHHHHHHHHHHhcC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccc
Confidence 455 678999999988776521 112477777788888888888899999999865
Q ss_pred -----CCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C------
Q psy852 538 -----KNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G------ 578 (891)
Q Consensus 538 -----~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G------ 578 (891)
++.+|+++|+++|++.+ ..++++. ..|... |.++ +| |
T Consensus 162 ~~~~~~~~~d~~~l~~~l~~~~----~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~ 237 (429)
T 1yiz_A 162 TISSADWVLDNNELEALFNEKT----KMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRI 237 (429)
T ss_dssp SEEGGGCBCCHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCG
T ss_pred cccccCcccCHHHHHHHhccCc----eEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcCh
Confidence 46899999999986421 1223322 234432 3321 11 1
Q ss_pred --C---CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHH
Q psy852 579 --I---EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIR 652 (891)
Q Consensus 579 --i---~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~ 652 (891)
+ ...|.+..++||+++.| ..+|+++.+++ +.+.+.....+ ..++. + ......+..+|+
T Consensus 238 ~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~--~~~~l~~~~~~-----------~~~~~--~-~~~~~a~~~~l~ 301 (429)
T 1yiz_A 238 CTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEA--LLKNLQMVHQN-----------CVYTC--A-TPIQEAIAVGFE 301 (429)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHH--HHHHHHHHHHT-----------TTCCC--C-HHHHHHHHHHHH
T ss_pred hhccCCcCceEEEecchhccCCCCcceEEEEeCHH--HHHHHHHHHhh-----------cccCC--C-hHHHHHHHHHHh
Confidence 1 23688899999988744 34899988643 22222110000 00111 1 111112223333
Q ss_pred HH----H--HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcc------hhhhhhHHHHHHHHH-h
Q psy852 653 TY----G--LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENN------LIADQNNRKLLEDIN-A 719 (891)
Q Consensus 653 ~l----G--~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~------~~~d~ln~~L~~~L~-~ 719 (891)
.. + .+.+++..++..+++++|.+.|++. ++++..+.....+++++.+... ..-.....++.+.|. +
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 380 (429)
T 1yiz_A 302 TELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKS 380 (429)
T ss_dssp HHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHh
Confidence 31 3 3446777778888999999999886 6777655445588888864200 000013467888776 6
Q ss_pred CCcEEEeecccc-------CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 720 SGRLHMVPASQE-------QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 720 ~G~~~~s~s~~~-------g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.|+.+..+.... +...+ +++. +++++|+++++.|++++
T Consensus 381 ~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 381 VGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDENLQKAAEILRKWK 426 (429)
T ss_dssp TSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHS
T ss_pred CCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHHHHHHHHHHHHhc
Confidence 898754443321 24566 8876 48999999999998754
No 308
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=98.47 E-value=1.1e-05 Score=90.41 Aligned_cols=271 Identities=10% Similarity=0.066 Sum_probs=151.4
Q ss_pred HHHHHHHHhhcc-CCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 447 ELAKLFEGKVRR-DPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 447 elAr~l~~~L~~-~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
++.+.+++.+.. .+. +++ +++|+++++..++..||... + +.-+++.+..-|.+...++.+
T Consensus 88 ~l~~~la~~~~~~~~~-~v~--~~~g~~~a~~~~~~~a~~~~-~---------------~~~vi~~~p~y~~~~~~~~~~ 148 (426)
T 1sff_A 88 ELCEIMNQKVPGDFAK-KTL--LVTTGSEAVENAVKIARAAT-K---------------RSGTIAFSGAYHGRTHYTLAL 148 (426)
T ss_dssp HHHHHHHHHSSCSSCE-EEE--EESSHHHHHHHHHHHHHHHH-T---------------CCEEEEETTCCCCSSHHHHHH
T ss_pred HHHHHHHHhCCccccc-EEE--EeCchHHHHHHHHHHHHHhh-C---------------CCeEEEECCCcCCCchHhhhh
Confidence 444556666632 212 455 78899999999988776421 1 123566677778777666666
Q ss_pred cCc-------------eEEEecCCC-----CCCcCHHHHHHHHHhhhhcCCccEEEE-e---cCCccc------------
Q psy852 526 AFV-------------RLKILEPDD-----KNSLRGATLRQVMQQDETMGYIPFFVS-T---TLGTTS------------ 571 (891)
Q Consensus 526 ~gv-------------~v~~Vp~d~-----~G~mD~~~Le~aI~~d~~~g~ip~~Vv-a---taGTT~------------ 571 (891)
.+. +++.+|.+. ++.+|+++|+++|++......+-++++ . +.|+..
T Consensus 149 ~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l 228 (426)
T 1sff_A 149 TGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRAL 228 (426)
T ss_dssp SSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHH
T ss_pred cCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHH
Confidence 543 277788753 346899999999974210011222333 1 245322
Q ss_pred hhhh-----hc---------C-------C-CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCc
Q psy852 572 CYRK-----SQ---------G-------I-EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAI 629 (891)
Q Consensus 572 c~~~-----ld---------G-------i-~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~ 629 (891)
|.++ +| | . ..+|.+++ +|+++.-+.+|+++.+++ +.+.+.. . ..
T Consensus 229 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~--sK~~~~GlriG~~~~~~~--~~~~l~~--~--~~------ 294 (426)
T 1sff_A 229 CDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTF--AKSIAGGFPLAGVTGRAE--VMDAVAP--G--GL------ 294 (426)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEE--CGGGGTSSCCEEEEEEHH--HHTTSCT--T--SB------
T ss_pred HHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEE--cccccCCCceEEEEEcHH--HHhhhcc--C--Cc------
Confidence 3321 11 1 0 12576654 699885344799998764 2222110 0 00
Q ss_pred cccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc----CCCcEEeCCCceeEEEEEecCCcch-
Q psy852 630 DYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR----DPRFEISNDVRLGLVCFRLRSENNL- 704 (891)
Q Consensus 630 ~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~----~~~~eil~~~~~~iV~Fr~~~~~~~- 704 (891)
..+.. .-.+....+..+|+.+..+ +..++..++++++.++|++ .+.+... ++..++++|++.+....
T Consensus 295 ---~~~~~-~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~ 366 (426)
T 1sff_A 295 ---GGTYA-GNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDGDHN 366 (426)
T ss_dssp ---CCSSS-SCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEEBGGGCTT
T ss_pred ---CcCCC-CCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCcccc
Confidence 00110 1112223344445554443 3455666777777777765 3333322 23456888888531000
Q ss_pred -hhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 705 -IADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 705 -~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.......++.+.|.+.|+++..+.. ....+ ++++..++++|++++++.|++++.
T Consensus 367 ~~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 422 (426)
T 1sff_A 367 KPDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIISQCFD 422 (426)
T ss_dssp SBCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 0023456788889889987544432 23456 888888999999999999998763
No 309
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=98.46 E-value=2.8e-06 Score=93.66 Aligned_cols=242 Identities=11% Similarity=-0.003 Sum_probs=148.3
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.+.+..+|
T Consensus 89 ~v~--~~~g~~~a~~~~~~~l~~-------------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d 147 (376)
T 2dou_A 89 EAL--ALIGSQEGLAHLLLALTE-------------------PEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLAD 147 (376)
T ss_dssp SEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBC
T ss_pred cEE--EcCCcHHHHHHHHHHhcC-------------------CCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 455 778999999888765421 11247777888888888888889999999985455799
Q ss_pred HHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----h---------cC-----C-----CCccE
Q psy852 543 GATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----S---------QG-----I-----EYADS 584 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----l---------dG-----i-----~~aDS 584 (891)
+++|+++|++..+ .++++ +..|+.. |.++ + +| + ...+-
T Consensus 148 ~~~l~~~l~~~~~----~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 223 (376)
T 2dou_A 148 LKAVPEGVWREAK----VLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVV 223 (376)
T ss_dssp GGGSCHHHHHHEE----EEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEE
T ss_pred HHHHHHhhccCce----EEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEE
Confidence 9999999964321 22222 1235442 3321 1 11 1 12345
Q ss_pred EEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH--HhhHHH
Q psy852 585 FNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG--LSGLQK 661 (891)
Q Consensus 585 Is~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG--~~G~~~ 661 (891)
+..++||+++.| ..+|+++.+++ +.+.+.....+ ..++. ..+.++++...+. .+.+++
T Consensus 224 ~~~s~sK~~~~~G~r~G~~~~~~~--~~~~l~~~~~~-----------~~~~~------~~~~~~a~~~~l~~~~~~~~~ 284 (376)
T 2dou_A 224 ELFSLSKSYNLAGFRLGFALGSEE--ALARLERVKGV-----------IDFNQ------YAGVLRMGVEALKTPKEVVRG 284 (376)
T ss_dssp EEEEHHHHHTCGGGCCEEEEECHH--HHHHHHHHHHH-----------HCCCS------CHHHHHHHHHHHTSCHHHHHH
T ss_pred EEecchhhcCChhheeEEEecCHH--HHHHHHHHHHh-----------cccCC------CHHHHHHHHHHHhCcHHHHHH
Confidence 677899999754 46888876432 22222110000 00000 1222333333332 355677
Q ss_pred HHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecccc--CCeEE-EE
Q psy852 662 YIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQE--QNDEV-FE 738 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~--g~~~l-~s 738 (891)
..++..+++++|.+.|++. +++..+.....++++++.. ....++.+.|.++|+.+..+.... +...+ ++
T Consensus 285 ~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris 356 (376)
T 2dou_A 285 YARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEG------VDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIA 356 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTT------CCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCC------CCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEE
Confidence 7778888999999999886 7765443334677887521 134678889988898755443332 24566 88
Q ss_pred ecCCCCHHHHHHHHHHHHHH
Q psy852 739 LQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 739 v~~~tT~edId~li~~L~ei 758 (891)
++. ++++|+++++.|+++
T Consensus 357 ~~~--~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 357 LVR--PLEELLEAAKRIREA 374 (376)
T ss_dssp CCS--CHHHHHHHHHHHHHT
T ss_pred ecC--CHHHHHHHHHHHHHH
Confidence 764 789999999988764
No 310
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=98.46 E-value=9.6e-07 Score=98.29 Aligned_cols=184 Identities=11% Similarity=-0.067 Sum_probs=115.5
Q ss_pred CCCCCccccccCCCCCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCc
Q psy852 13 THWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDI 92 (891)
Q Consensus 13 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~ 92 (891)
.+..-..|+++..++...+.+...+....-+.....|.......++-+.+.+++.+-.|++-+ |+++
T Consensus 31 i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------------~~~i 97 (401)
T 7aat_A 31 MNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFK-------------SGRY 97 (401)
T ss_dssp EECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH-------------TTCE
T ss_pred eeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccc-------------cCce
Confidence 444445566666666666666665544433222223332233445555666666554443211 1111
Q ss_pred cccccccCCCCCCCCc--ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEe
Q psy852 93 DMNIEDYMTPANQPQS--LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILE 170 (891)
Q Consensus 93 ~~~~~~~~t~~~~~~~--~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~ 170 (891)
.+ |+||+...++.+..+..... +.-.|+++.-+|.+....+...|.+++.++
T Consensus 98 --------------~~v~t~G~~~al~~~~~~l~~~~~------------~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~ 151 (401)
T 7aat_A 98 --------------VTVQGISGTGSLRVGANFLQRFFK------------FSRDVYLPKPSWGNHTPIFRDAGLQLQAYR 151 (401)
T ss_dssp --------------EEEEEEHHHHHHHHHHHHHHHHCT------------TCCEEEEEESCCTTHHHHHHHTTCEEEEEE
T ss_pred --------------EEEecCcchHHHHHHHHHHHHhcc------------CCCEEEEcCCCchhHHHHHHHcCCeeEeee
Confidence 12 57887544433333321111 112377777888888888877788999999
Q ss_pred cC--CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc---cCHHHHHHHHHHcCCceeeeccccCCc
Q psy852 171 PD--DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 171 ~d--~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
.+ +++.+|++.|++.+++. ...+.+|+.+..+|.||.+ +++++|+++|+++|+++++|-||+++.
T Consensus 152 ~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~ 221 (401)
T 7aat_A 152 YYDPKTCSLDFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFA 221 (401)
T ss_dssp CEETTTTEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTT
T ss_pred eeccccCccCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEcccccccc
Confidence 75 47899999999988762 1235688888999999955 568899999999999999999996554
No 311
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=98.45 E-value=2.4e-06 Score=98.10 Aligned_cols=234 Identities=14% Similarity=0.143 Sum_probs=140.7
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH----HHcCceEEEecCCCCCCcCHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGA 544 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa----~l~gv~v~~Vp~d~~G~mD~~ 544 (891)
.++|++++..++.+.-. +.-.|+++...|.+....+ ...|++++.+|.+ |++
T Consensus 135 ~~sG~~Ai~~al~~l~~-------------------~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~ 190 (445)
T 1qgn_A 135 MASGMCASTVMLLALVP-------------------AGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA-----DVG 190 (445)
T ss_dssp ESCHHHHHHHHHHHHSC-------------------SSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS-----CHH
T ss_pred eCCHHHHHHHHHHHHhC-------------------CCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHH
Confidence 34556998888765310 1124777888888877653 3468899999875 899
Q ss_pred HHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcCC-----------CCccEEEEcCcccCCccc
Q psy852 545 TLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQGI-----------EYADSFNVNVNKWLLTAF 597 (891)
Q Consensus 545 ~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldGi-----------~~aDSIs~d~HK~L~~P~ 597 (891)
+|+++|++++- ..+++. +..|+.. |+++ +|.+ ..+|.+..++||+++.+.
T Consensus 191 ~l~~ai~~~tv---~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~g 267 (445)
T 1qgn_A 191 ALELALNQKKV---NLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHN 267 (445)
T ss_dssp HHHHHHHHSCE---EEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSS
T ss_pred HHHHHhccCCC---CEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccc
Confidence 99999986420 122222 2234433 4331 2221 248999999999998553
Q ss_pred --ccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q psy852 598 --DSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEG 675 (891)
Q Consensus 598 --g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~ 675 (891)
..|+++.+++ .+ +.+.. +.. .++ -....+..|..++ +.+.+..++++..++++++.+
T Consensus 268 d~~~G~l~~~~~-l~-~~l~~---~~~----------~~g----~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~ 326 (445)
T 1qgn_A 268 DVLAGCISGPLK-LV-SEIRN---LHH----------ILG----GALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAE 326 (445)
T ss_dssp SCCCEEEEECHH-HH-HHHHH---HHH----------HHC----CCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEECHH-HH-HHHHH---HHH----------HhC----CCCCHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHH
Confidence 2888887653 22 21110 000 000 0012334465543 556677788888899999999
Q ss_pred HhccCCCc-EEeCC-----C-----------ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc---------
Q psy852 676 KVRRDPRF-EISND-----V-----------RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS--------- 729 (891)
Q Consensus 676 ~L~~~~~~-eil~~-----~-----------~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~--------- 729 (891)
.|++.|++ ++..+ | ..++++|.+.+. ......+++.|...++....+..
T Consensus 327 ~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~-----~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~ 401 (445)
T 1qgn_A 327 ILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD-----LLTTAKFVDALKIPYIAPSFGGCESIVDQPAI 401 (445)
T ss_dssp HHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC-----HHHHHHHHHHCSSSEECSCCCSSSCEEECHHH
T ss_pred HHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC-----HHHHHHHHHhCCCceEeccCCCCceeeecccc
Confidence 99999888 44433 1 357999999752 22345666666533332111110
Q ss_pred ------------ccC--CeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 730 ------------QEQ--NDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 730 ------------~~g--~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
..+ ...+ +|++ .||+|.++++|++..
T Consensus 402 ~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al 442 (445)
T 1qgn_A 402 MSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQAL 442 (445)
T ss_dssp HHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHH
T ss_pred cccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHH
Confidence 011 2466 9887 468999999998876
No 312
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=98.45 E-value=1.9e-06 Score=96.54 Aligned_cols=247 Identities=12% Similarity=0.023 Sum_probs=151.2
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC-C-C
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-N-S 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~-G-~ 540 (891)
+++ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.+++ | .
T Consensus 101 ~v~--~t~g~~~a~~~~~~~~~~-------------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 159 (412)
T 2x5d_A 101 EAI--VTIGSKEGLAHLMLATLD-------------------HGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFF 159 (412)
T ss_dssp SEE--EESCHHHHHHHHHHHHCC-------------------TTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHH
T ss_pred CEE--EcCChHHHHHHHHHHhCC-------------------CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCC
Confidence 455 678999999988776411 1225788888899998888888899999998765 3 4
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh--------------hcC--------C---CC
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK--------------SQG--------I---EY 581 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~--------------ldG--------i---~~ 581 (891)
+|+++|++++++.+ ..++++. ..|+.. |.++ .+| + ..
T Consensus 160 ~d~~~l~~~i~~~~----~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 235 (412)
T 2x5d_A 160 NELERAIRESIPKP----RMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKD 235 (412)
T ss_dssp HHHHHHHHTEESCC----SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGG
T ss_pred CCHHHHHHhcccCc----eEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccC
Confidence 89999999886421 2233322 245442 3321 111 1 23
Q ss_pred ccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH--Hhh
Q psy852 582 ADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG--LSG 658 (891)
Q Consensus 582 aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG--~~G 658 (891)
.|-+..++||+++.| ..+|+++.+++ +.+.+.....+ ..++ ...+.++++...+. .+.
T Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~l~~~~~~-----------~~~~------~~~~~~~a~~~~l~~~~~~ 296 (412)
T 2x5d_A 236 IAVEFFTLSKSYNMAGWRIGFMVGNPE--LVSALARIKSY-----------HDYG------TFTPLQVAAIAALEGDQQC 296 (412)
T ss_dssp TEEEEEECC-CCSCTTSCCEEEEECHH--HHHHHHHHHHH-----------HCCC------CCHHHHHHHHHHHHSCSHH
T ss_pred cEEEEecCccccCCcccceEEEEcCHH--HHHHHHHHHhh-----------hccC------CCHHHHHHHHHHHhCCHHH
Confidence 567789999999744 45899988533 22222110000 0011 11233344444442 345
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcEEeCCCcee-EEEEEecCCcchhhhhhHHHHHHHHHh-CCcEEEeeccc--cCCe
Q psy852 659 LQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLG-LVCFRLRSENNLIADQNNRKLLEDINA-SGRLHMVPASQ--EQND 734 (891)
Q Consensus 659 ~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-iV~Fr~~~~~~~~~d~ln~~L~~~L~~-~G~~~~s~s~~--~g~~ 734 (891)
+++..++..++++++.+.|++. ++++.. +..+ .++++++... . ......+.+.|.+ .|+.+..+... .+..
T Consensus 297 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~g~~~~~~~~~~~-~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~ 371 (412)
T 2x5d_A 297 VRDIARQYQQRRDVLVKGLREA-GWMVEN-PKASMYVWAKIPEPY-A--HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDD 371 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCCCC-CSBSSEEEEECCTTT-G--GGCHHHHHHHHHHHHCEECEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCEecC-CCeeeEEEEEcCCcc-C--CCCHHHHHHHHHHHCCEEEeCchhhCCCCCC
Confidence 7777788888999999999886 666653 3434 6777774210 0 0135678888865 69876544433 2345
Q ss_pred EE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 735 EV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 735 ~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+ ++++. ++++|+++++.|++++.
T Consensus 372 ~iRis~~~--~~~~l~~~l~~l~~~l~ 396 (412)
T 2x5d_A 372 HVRFALIE--NRDRLRQAVRGIKAMFR 396 (412)
T ss_dssp EEEEECCS--CHHHHHHHHHHHHHHHH
T ss_pred eEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 66 88875 78999999999988763
No 313
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=98.44 E-value=1.4e-05 Score=89.95 Aligned_cols=270 Identities=10% Similarity=-0.016 Sum_probs=151.3
Q ss_pred HHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 445 HCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
..++++.+++.+...+. +|+ +++|++|+|..++.+++.....+. ..++-+|+.....|.+..-++.
T Consensus 88 ~~~l~~~la~~~~~~~~-~v~--~~~ggtea~~~ai~~~~~~~~~~g-----------~~~~~vi~~~~~yh~~~~~~~~ 153 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLE-CVF--LADSGSVAVEVAMKMALQYWQAKG-----------EARQRFLTFRNGYHGDTFGAMS 153 (429)
T ss_dssp HHHHHHHHHHHSCTTCC-EEE--EESSHHHHHHHHHHHHHHHHHHHT-----------CCCCEEEEETTCCCCSSHHHHT
T ss_pred HHHHHHHHHHhCCCCCC-EEE--EeCCHHHHHHHHHHHHHHHhcccC-----------CCCCeEEEECCCCCCCchhhhh
Confidence 35666777777753233 566 789999999999988775322110 0012345555567765544443
Q ss_pred HcC-------------ceEEEecCC------CCCCcCHHHHHHHHHhhhhcCCccEEEEe-----cCCccc---------
Q psy852 525 MAF-------------VRLKILEPD------DKNSLRGATLRQVMQQDETMGYIPFFVST-----TLGTTS--------- 571 (891)
Q Consensus 525 l~g-------------v~v~~Vp~d------~~G~mD~~~Le~aI~~d~~~g~ip~~Vva-----taGTT~--------- 571 (891)
+.+ .+++.+|++ ..+.+|+++|+++|++.. ..+.++++. ..|+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~~~~vi~~p~~~n~tG~~~~~~~~l~~i 231 (429)
T 1s0a_A 154 VCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR--HEIAAVIIEPIVQGAGGMRMYHPEWLKRI 231 (429)
T ss_dssp TSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT--TTEEEEEECSSEECTTTCEEBCTHHHHHH
T ss_pred hcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC--CCEEEEEEeecccCCCCcccCCHHHHHHH
Confidence 321 135556653 235799999999997521 122233332 245422
Q ss_pred ---hhhh-----hc---------C----C----CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccC-CCccccC
Q psy852 572 ---CYRK-----SQ---------G----I----EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVD-PLYLQHG 624 (891)
Q Consensus 572 ---c~~~-----ld---------G----i----~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~-~~Yl~~~ 624 (891)
|.++ +| | + ...|.++++ |+++++ +++|+++.+++ +.+.+... ...+..
T Consensus 232 ~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~s--K~l~~G~~~iG~~~~~~~--~~~~l~~~~~~~~~~- 306 (429)
T 1s0a_A 232 RKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLG--KALTGGTMTLSATLTTRE--VAETISNGEAGCFMH- 306 (429)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTSSSCCEEEEECHH--HHHHHHTSTTSSCSC-
T ss_pred HHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEec--ccccCCCccceEEEeCHH--HHHHhhcCCCccccc-
Confidence 3331 11 1 0 125777766 988877 88999998753 22322211 000000
Q ss_pred CCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC---CCcEEeCCCceeEEEEEecCC
Q psy852 625 HEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD---PRFEISNDVRLGLVCFRLRSE 701 (891)
Q Consensus 625 ~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~---~~~eil~~~~~~iV~Fr~~~~ 701 (891)
..+... -.+.....-.+++.+..+ +..++..+++++|.++|+++ +.+..+ ++..+++.|.+.+.
T Consensus 307 --------~~t~~~-n~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~~~~~~~ 373 (429)
T 1s0a_A 307 --------GPTFMG-NPLACAAANASLAILESG---DWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVVETTHP 373 (429)
T ss_dssp --------CCTTTT-CHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEEEESSC
T ss_pred --------CCCCCC-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeEEEEEEECCc
Confidence 001100 011112223334433333 34566677888999988774 455432 22335777877531
Q ss_pred cchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 702 NNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 702 ~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.....+.+.|.++|+++ .+. + ..+ ++++..+|++|++++++.|++++
T Consensus 374 ------~~~~~l~~~l~~~Gi~v-~~~---~-~~iRis~~~~~t~e~i~~~~~~l~~~~ 421 (429)
T 1s0a_A 374 ------VNMAALQKFFVEQGVWI-RPF---G-KLIYLMPPYIILPQQLQRLTAAVNRAV 421 (429)
T ss_dssp ------BCHHHHHHHHHHTTEEC-CCB---T-TEEEECCCTTCCHHHHHHHHHHHHHHT
T ss_pred ------ccHHHHHHHHHHCCCEE-ecc---C-CEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 13457888888889773 221 2 456 99888899999999999998775
No 314
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=98.44 E-value=2.8e-06 Score=94.50 Aligned_cols=83 Identities=17% Similarity=0.096 Sum_probs=64.8
Q ss_pred EEEecCCCChHHHHHHHHcCCe------------EEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcccc-
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVR------------LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCS- 210 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~------------v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Ga- 210 (891)
+|+.+..-|.+...++...+.+ ++.++.+ |+++|++.+++. +.+|+++..+|.+|.
T Consensus 131 vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~nptG~~ 199 (397)
T 2ord_A 131 ILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRRKMSED------VCAVFLEPIQGESGIV 199 (397)
T ss_dssp EEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHHHCCTT------EEEEEECSEECTTTCE
T ss_pred EEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC-----CHHHHHHHhhcC------eEEEEEecccCCCCcc
Confidence 4556667787777666554433 7777763 899999988643 457788889999999
Q ss_pred ---ccCHHHHHHHHHHcCCceeeeccccCC
Q psy852 211 ---FDNLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 211 ---vDpl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
.+++++|+++|+++|+++++|.+++|+
T Consensus 200 ~~~~~~l~~l~~l~~~~~~~li~De~~~~~ 229 (397)
T 2ord_A 200 PATKEFLEEARKLCDEYDALLVFDEVQCGM 229 (397)
T ss_dssp ECCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 489999999999999999999999663
No 315
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=98.44 E-value=4.3e-06 Score=92.85 Aligned_cols=252 Identities=12% Similarity=0.070 Sum_probs=144.6
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++.+.+++.+...+. +++ +++|+++++..++.+++... + ++-+|+.+...|.+...++.+
T Consensus 90 ~~l~~~la~~~~~~~~-~v~--~~~gg~~a~~~al~~~~~~~-~---------------~~~vi~~~~~y~~~~~~~~~~ 150 (395)
T 1vef_A 90 GEFYRTLTAILPPELN-RVF--PVNSGTEANEAALKFARAHT-G---------------RKKFVAAMRGFSGRTMGSLSV 150 (395)
T ss_dssp HHHHHHHHHTSCTTEE-EEE--EESSHHHHHHHHHHHHHHHH-S---------------CCEEEEETTCCCCSSHHHHHT
T ss_pred HHHHHHHHHhcCCCcC-EEE--EcCcHHHHHHHHHHHHHHHh-C---------------CCeEEEEcCCcCCCchhhhhh
Confidence 3455566666532222 455 67899999999988775311 0 123455555566666656555
Q ss_pred cCce------------EEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc------------hhhh---
Q psy852 526 AFVR------------LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS------------CYRK--- 575 (891)
Q Consensus 526 ~gv~------------v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~------------c~~~--- 575 (891)
.+.+ +..+|. .|+++|+++|++.+ ..++++ +..|+.. |.++
T Consensus 151 ~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~~----~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~ 221 (395)
T 1vef_A 151 TWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEET----AAVILEPVQGEGGVRPATPEFLRAAREITQEKGAL 221 (395)
T ss_dssp CCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTTE----EEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCE
T ss_pred cCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccCE----EEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCE
Confidence 4432 333432 48899988886421 112221 2245432 3321
Q ss_pred --hcC----C-------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcc
Q psy852 576 --SQG----I-------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGI 636 (891)
Q Consensus 576 --ldG----i-------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti 636 (891)
+|+ + ..+|.+++ ||+++++.++|+++++++ +.+.+... .+ ...++.
T Consensus 222 li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~g~~~G~~~~~~~--~~~~l~~~-~~----------~~~~~~ 286 (395)
T 1vef_A 222 LILDEIQTGMGRTGKRFAFEHFGIVPDILTL--AKALGGGVPLGVAVMREE--VARSMPKG-GH----------GTTFGG 286 (395)
T ss_dssp EEEECTTTTTTTTSSSSTHHHHTCCCSEEEE--CGGGGTTSSCEEEEEEHH--HHHTSCTT-SS----------CCSSTT
T ss_pred EEEEecccCCccCCchhHhhhcCCCCCEEEE--cccccCCCceEEEEehHH--HHhhhccC-Cc----------CCCcCC
Confidence 111 1 12577755 999998899999999865 32222110 00 001110
Q ss_pred cccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEe--CCCceeEEEEEecCCcchhhhhhHHHHH
Q psy852 637 PLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEIS--NDVRLGLVCFRLRSENNLIADQNNRKLL 714 (891)
Q Consensus 637 ~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil--~~~~~~iV~Fr~~~~~~~~~d~ln~~L~ 714 (891)
-.+....+..+++.+.. .+..++..++++++.+.|++.+. .++ .++..++++|++.+. ...+.
T Consensus 287 ---~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~~~~~~~~~~--------~~~l~ 351 (395)
T 1vef_A 287 ---NPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGLMVGLELKEK--------AAPYI 351 (395)
T ss_dssp ---CHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETTEEEEEESSC--------SHHHH
T ss_pred ---CHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEEEEEEEEcCh--------HHHHH
Confidence 01222233444554433 34566777889999999987643 111 122346888887531 35678
Q ss_pred HHHH-hCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 715 EDIN-ASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 715 ~~L~-~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.|. +.|+.+..+ +...+ ++++..++++|++++++.|+++.
T Consensus 352 ~~l~~~~gi~v~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 352 ARLEKEHRVLALQA----GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp HHHHHHHCEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 8888 889774332 34566 88888899999999999998764
No 316
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=98.44 E-value=5.4e-06 Score=93.35 Aligned_cols=246 Identities=8% Similarity=-0.042 Sum_probs=149.4
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH-cCceEEEecCCC-CCCc
Q psy852 464 ISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM-AFVRLKILEPDD-KNSL 541 (891)
Q Consensus 464 Vv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l-~gv~v~~Vp~d~-~G~m 541 (891)
++ +++|+++++..++.+... +.-.|++..-.|......+.. .|.+++.+|.++ ++.+
T Consensus 116 i~--~t~g~~~al~~~~~~l~~-------------------~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~ 174 (430)
T 2x5f_A 116 PI--VTNALTHGLSLVGDLFVN-------------------QDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHY 174 (430)
T ss_dssp CE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCB
T ss_pred EE--EcCCchHHHHHHHHHHhC-------------------CCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCc
Confidence 55 678999999888776421 112477778888888888888 899999999875 4789
Q ss_pred CHHHHHHHHHhhhhcCCccEEEEe----cCCccc-----------hhh-----h-----hc---------CC--------
Q psy852 542 RGATLRQVMQQDETMGYIPFFVST----TLGTTS-----------CYR-----K-----SQ---------GI-------- 579 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vva----taGTT~-----------c~~-----~-----ld---------Gi-------- 579 (891)
|+++|+++|++.. ....++++. ..|++. |.+ + +| |-
T Consensus 175 d~~~l~~~l~~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 252 (430)
T 2x5f_A 175 TTDSLVEALQSYN--KDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTA 252 (430)
T ss_dssp CSHHHHHHHHHCC--SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHH
T ss_pred CHHHHHHHHHhcC--CCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHH
Confidence 9999999998621 112222322 245443 444 3 11 10
Q ss_pred ----CCc---cEEEEcCcccCCcc-cccEEEEE--eCCccchhhhcc-CCCccccCCCCCccccCCcccccccccchHHH
Q psy852 580 ----EYA---DSFNVNVNKWLLTA-FDSSCLWV--ADRYKLTSALVV-DPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLW 648 (891)
Q Consensus 580 ----~~a---DSIs~d~HK~L~~P-~g~G~llv--R~~~~L~~~l~~-~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW 648 (891)
... +-+..+.||+++.| ..+|++++ +++..+ +.+.. .....+.. .++ ...+.++
T Consensus 253 ~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~-~~l~~~~~~~~~~~--------~~~------~~~~~~~ 317 (430)
T 2x5f_A 253 LTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTK-EVLEAKVKGLIRSN--------ISS------GPLPTQS 317 (430)
T ss_dssp HHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHH-HHHHHHHHHHHHTT--------TSS------CCHHHHH
T ss_pred HhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHH-HHHHHHHhhhhhcc--------cCC------CChHHHH
Confidence 111 34467899999756 34799988 233322 22211 00000000 001 1223444
Q ss_pred HHHHHHH-----HhhHHHHHHHHHHHHHHHHHHhc----cCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHh
Q psy852 649 FVIRTYG-----LSGLQKYIRRHCELAKLFEGKVR----RDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINA 719 (891)
Q Consensus 649 ~~L~~lG-----~~G~~~~i~~~~~lA~~L~~~L~----~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~ 719 (891)
++...+. .+.+.+..++..++++++.+.|+ +. ++++..+.....+++++++. ...++.+.|.+
T Consensus 318 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~~~~g~~~~~~~~~~-------~~~~~~~~l~~ 389 (430)
T 2x5f_A 318 AVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYDFNSGYFMAIKVHDV-------DPEALRKHLID 389 (430)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECCCCBSSEEEEEESSS-------CHHHHHHHHHH
T ss_pred HHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeCCCceEEEEeCCCCC-------CHHHHHHHHHH
Confidence 4444443 22233366677788899999998 43 67765433333577787522 34678888887
Q ss_pred -CCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 720 -SGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 720 -~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.|+.+..+ +...+ ++++. +++++|+++++.|++++.
T Consensus 390 ~~gi~v~~g----~~~~iRis~~~-~~~e~i~~~~~~l~~~l~ 427 (430)
T 2x5f_A 390 KYSIGVIAL----NATDIRIAFSC-VEKDDIPHVFDSIAKAID 427 (430)
T ss_dssp HHCEECEEC----SSSEEEEEGGG-SCGGGHHHHHHHHHHHHH
T ss_pred hCCEEEecC----CCCeEEEEEec-CCHHHHHHHHHHHHHHHH
Confidence 89875443 34556 98885 599999999999998763
No 317
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=98.44 E-value=9.4e-06 Score=88.52 Aligned_cols=251 Identities=10% Similarity=0.027 Sum_probs=149.5
Q ss_pred HHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCc
Q psy852 449 AKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFV 528 (891)
Q Consensus 449 Ar~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv 528 (891)
.+.+++.+...+. +++ +++|+++++..++.+.. . -.|+++.-.|.+...++...|.
T Consensus 56 r~~la~~~~~~~~-~i~--~t~g~~~al~~~~~~l~-----g----------------d~Vi~~~p~~~~~~~~~~~~g~ 111 (350)
T 3fkd_A 56 RQMLAKRNSVDNN-AIL--VTNGPTAAFYQIAQAFR-----G----------------SRSLIAIPSFAEYEDACRMYEH 111 (350)
T ss_dssp HHHHHHHTTCCGG-GEE--EESHHHHHHHHHHHHTT-----T----------------CEEEEEESCCHHHHHHHHHTTC
T ss_pred HHHHHHHhCcCHH-HEE--EcCCHHHHHHHHHHHHC-----C----------------CEEEEeCCCcHHHHHHHHHcCC
Confidence 3444445543333 566 78899999988876643 1 1377788889988888888888
Q ss_pred eEEEecC-CCCCCcCH---------------------HHHHHHHHhhhhcCCccEEEEecCCccc-----hhhhhcCCCC
Q psy852 529 RLKILEP-DDKNSLRG---------------------ATLRQVMQQDETMGYIPFFVSTTLGTTS-----CYRKSQGIEY 581 (891)
Q Consensus 529 ~v~~Vp~-d~~G~mD~---------------------~~Le~aI~~d~~~g~ip~~VvataGTT~-----c~~~ldGi~~ 581 (891)
+++.+|. ++.+.+++ +.|++.++...+ .++++....+... ....++ ...
T Consensus 112 ~~~~v~~~~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~---~~li~Dea~~~~~~~~~~~~~~~~-~~~ 187 (350)
T 3fkd_A 112 EVCFYPSNEDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPD---TTFVLDQSYVSFTTEEVIRPADIK-GRK 187 (350)
T ss_dssp EEEEEETTSCGGGSCCTTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTT---SEEEEECTTTTSCSSCCCCGGGGT-TCS
T ss_pred eEEEEecCCccccCccCCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCC---CEEEEECchhhhccCcchhhHHhh-cCC
Confidence 8888888 65344433 333333332110 1222222111000 000111 112
Q ss_pred ccEEEEcCcccCCc-ccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhh-H
Q psy852 582 ADSFNVNVNKWLLT-AFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSG-L 659 (891)
Q Consensus 582 aDSIs~d~HK~L~~-P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G-~ 659 (891)
.+-+..+++|+++. ...+|+++. +++.. +.+..... .+ ....+.++++...+.... +
T Consensus 188 ~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~-~~~~~~~~-------------~~------~~~~~~~~~~~~~l~~~~~~ 246 (350)
T 3fkd_A 188 NLVMVYSFSHAYGIPGLRIGYIVA-NKDFM-KRVAAFST-------------PW------AVNALAIEAAKFILIHPAQF 246 (350)
T ss_dssp SEEEEEESHHHHSCGGGCCEEEEC-CHHHH-HHHHTTCC-------------TT------CSCHHHHHHHHHHHHCTTTT
T ss_pred CEEEEecCchhccCcchheEeEEe-CHHHH-HHHHHhCC-------------CC------CCCHHHHHHHHHHHhCHHHH
Confidence 34667789999984 477898887 33322 22211000 00 112344555555554333 4
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHh-CCcEEEeeccc--cCCeEE
Q psy852 660 QKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINA-SGRLHMVPASQ--EQNDEV 736 (891)
Q Consensus 660 ~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~-~G~~~~s~s~~--~g~~~l 736 (891)
.+.+++..++++++.+.|++.+++++. ++..+.+.++++.. ...++.+.|.+ .|+.+..+... .+...+
T Consensus 247 ~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~i 318 (350)
T 3fkd_A 247 TLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKKG-------TAAELKKYMLEEYNMLIRDASNFRGLDESYV 318 (350)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESSS-------CHHHHHHHHHHTTCEECEECTTSTTCCTTEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCCC-------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEE
Confidence 455556668999999999988899875 45566777888532 45678889988 89876555433 224566
Q ss_pred -EEecCCCCHHHHHHHHHHHHHHH
Q psy852 737 -FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 737 -~sv~~~tT~edId~li~~L~ei~ 759 (891)
++++ +.+++|+++++|+++.
T Consensus 319 Ris~~---~~~~~~~l~~al~~~~ 339 (350)
T 3fkd_A 319 RITTQ---RPAQNQLFIKALETFL 339 (350)
T ss_dssp EEECC---CHHHHHHHHHHHHHHH
T ss_pred EEEcC---CHHHHHHHHHHHHHHH
Confidence 8875 8899999999998776
No 318
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=98.43 E-value=2e-05 Score=88.23 Aligned_cols=93 Identities=9% Similarity=-0.011 Sum_probs=65.4
Q ss_pred EEEecCCCChHHHHHHHHcCC-------------eEEEEecCC-----CCcccHHHHHHHHHhhhhcCCcceEEEeeccc
Q psy852 144 MAYCSKEAHSCVEKAAMMAFV-------------RLKILEPDD-----KNSLRGATLRQVMQQDETMGYIPFFVSTTLGT 205 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~-------------~v~~V~~d~-----~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gt 205 (891)
+++.+..-|.+...++.+.+. .++.++.+. .+.+|+++|++.+++.. .+..+.+|+++...
T Consensus 131 vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~ 209 (426)
T 1sff_A 131 TIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQ 209 (426)
T ss_dssp EEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBC
T ss_pred EEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEeccc
Confidence 455666777777666655432 277788763 34689999999997421 11124466665433
Q ss_pred CccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 206 TSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 206 t~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+.+|.+.| +++|+++|+++|++|++|.+|+|+
T Consensus 210 ~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~ 245 (426)
T 1sff_A 210 GEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGA 245 (426)
T ss_dssp TTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhcc
Confidence 33997777 999999999999999999999763
No 319
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=98.43 E-value=1.3e-05 Score=90.53 Aligned_cols=164 Identities=7% Similarity=-0.086 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCC-CCCCCCCCCCCCCCCCCccccccccCCCCCCCC
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPE-KFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQ 107 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~-~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~ 107 (891)
..|.+...+...+-.....++..++ .+...++.++|+++++... +.. .
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~~~~--~~~~~~l~~~la~~~~~~~~~~v-----------------------------~ 108 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANPAGATILSAS--NAPAVTLAERLLASFPGEGTHKI-----------------------------W 108 (439)
T ss_dssp SCHHHHHHHHHHHHSCSCSCSSSSE--EHHHHHHHHHHHHTTTCTTTEEE-----------------------------E
T ss_pred CCHHHHHHHHHHHHhccCccccccC--CHHHHHHHHHHHHhCCCCCCCEE-----------------------------E
Confidence 4566666665554332222222222 3556667788899885432 110 1
Q ss_pred cccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCe--------------EEEEecCC
Q psy852 108 SLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVR--------------LKILEPDD 173 (891)
Q Consensus 108 ~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~--------------v~~V~~d~ 173 (891)
+++||+... ...+.++|.... ++-+|++...-|.+...++.+.+.. +..++.+.
T Consensus 109 ~~~ggsea~-~~al~~~~~~~~-----------~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (439)
T 3dxv_A 109 FGHSGSDAN-EAAYRAIVKATG-----------RSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP 176 (439)
T ss_dssp EESSHHHHH-HHHHHHHHHHHS-----------CCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC
T ss_pred EeCCHHHHH-HHHHHHHHHHhC-----------CCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc
Confidence 457887654 444444543211 1234556666677766665443321 23455443
Q ss_pred CCcc-----cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 174 KNSL-----RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 174 ~g~i-----d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
.+.- |+++|++.+++. ....+.+|++.-.++.+|.+.| +++|+++|++||++|++|-+|+|+
T Consensus 177 ~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~ 247 (439)
T 3dxv_A 177 YRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGL 247 (439)
T ss_dssp BTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred ccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 3333 899999999521 1123567777778888999999 999999999999999999999764
No 320
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=98.43 E-value=3.2e-06 Score=92.27 Aligned_cols=78 Identities=12% Similarity=0.004 Sum_probs=64.0
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEec-CCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEP-DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~-d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
|+++.-+|.+...++...+.+++.+++ ++.+.+++ +. +.+|+++..+|.+|.+-|+++|.++++.
T Consensus 92 Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~--------~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~ 157 (350)
T 3fkd_A 92 SLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF--------SN------MDFCWLCNPNNPDGRLLQRTEILRLLND 157 (350)
T ss_dssp EEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC--------TT------CSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc--------CC------CCEEEEeCCCCCcCCCCCHHHHHHHHHh
Confidence 777788999999888878889999999 76566665 11 3467778889999999999999999998
Q ss_pred cC-CceeeeccccC
Q psy852 224 FD-VWLHVDGAYAG 236 (891)
Q Consensus 224 ~~-~~lHvDaA~GG 236 (891)
++ .++++|.||++
T Consensus 158 ~~~~~li~Dea~~~ 171 (350)
T 3fkd_A 158 HPDTTFVLDQSYVS 171 (350)
T ss_dssp CTTSEEEEECTTTT
T ss_pred CCCCEEEEECchhh
Confidence 86 68888888854
No 321
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=98.42 E-value=6.2e-06 Score=90.58 Aligned_cols=249 Identities=11% Similarity=0.020 Sum_probs=149.5
Q ss_pred HHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceE
Q psy852 451 LFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRL 530 (891)
Q Consensus 451 ~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v 530 (891)
.+++.+...+. +|+ +++|+++++..++.+. +. -.|++..-+|.+...++...|.++
T Consensus 67 ~la~~~~~~~~-~v~--~~~g~~~al~~~~~~~-----~g----------------d~vl~~~p~y~~~~~~~~~~g~~~ 122 (364)
T 1lc5_A 67 ALARHHQVPAS-WIL--AGNGETESIFTVASGL-----KP----------------RRAMIVTPGFAEYGRALAQSGCEI 122 (364)
T ss_dssp HHHHHHTSCGG-GEE--EESSHHHHHHHHHHHH-----CC----------------SEEEEEESCCTHHHHHHHHTTCEE
T ss_pred HHHHHHCcCHH-HEE--ECCCHHHHHHHHHHHc-----CC----------------CeEEEeCCCcHHHHHHHHHcCCeE
Confidence 34444433222 455 7889999999887765 11 136667778888888888889999
Q ss_pred EEecCCCCCCcCH-HHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C---
Q psy852 531 KILEPDDKNSLRG-ATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G--- 578 (891)
Q Consensus 531 ~~Vp~d~~G~mD~-~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G--- 578 (891)
+.+|.+++..+++ +++.+.+.+ ....++++. ..|+.. |.++ +| +
T Consensus 123 ~~v~~~~~~~~~~l~~~~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 198 (364)
T 1lc5_A 123 RRWSLREADGWQLTDAILEALTP----DLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGF 198 (364)
T ss_dssp EEEECCGGGTTCCCTTHHHHCCT----TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS
T ss_pred EEEeCCcccccchhHHHHHhccC----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccch
Confidence 9999875333443 434343322 111223322 245443 3321 11 1
Q ss_pred C-----CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHH
Q psy852 579 I-----EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIR 652 (891)
Q Consensus 579 i-----~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~ 652 (891)
+ ...|-+..+.||+++.| ..+|++++.+++.+......... ++ ...+.+++...
T Consensus 199 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~--------------~~------~~~~~~~~~~~ 258 (364)
T 1lc5_A 199 IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP--------------WS------VNALAALAGEV 258 (364)
T ss_dssp GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCT--------------TC------SCHHHHHHHHH
T ss_pred hhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCC--------------CC------CCHHHHHHHHH
Confidence 1 12466788999999855 45788883444332221111100 11 12334444444
Q ss_pred HHHH-hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc-
Q psy852 653 TYGL-SGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ- 730 (891)
Q Consensus 653 ~lG~-~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~- 730 (891)
.+.. +.+++..++..++++++.+.|++.+++++. ++..+.++|++... ..++.+.|.++|+.+..+...
T Consensus 259 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~~~~~--------~~~l~~~l~~~gi~v~~g~~~~ 329 (364)
T 1lc5_A 259 ALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCERE--------DIDLQRRLLTQRILIRSCANYP 329 (364)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESCT--------TCCHHHHHHTTTEECEECTTST
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCeEEEEECCCc--------HHHHHHHHHHCCcEEeeCcccC
Confidence 4432 456677777888899999999988888876 45566777877421 235778888889875544433
Q ss_pred -cCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 731 -EQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 731 -~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.+...+ ++++ +.+|+++++++|+++.
T Consensus 330 ~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 357 (364)
T 1lc5_A 330 GLDSRYYRVAIR---SAAQNERLLAALRNVL 357 (364)
T ss_dssp TCCTTEEEEECC---CHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 224566 8864 6899999999998775
No 322
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=98.42 E-value=1.2e-05 Score=90.95 Aligned_cols=85 Identities=12% Similarity=0.017 Sum_probs=63.1
Q ss_pred EEecCCCChHHHHHHHHcCCe----------EEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC-
Q psy852 145 AYCSKEAHSCVEKAAMMAFVR----------LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN- 213 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~----------v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp- 213 (891)
|++..-+|.+...++...+.+ ++.+++++++.++.+. ++. ..+.+|+++..+|.+|.+-+
T Consensus 158 Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~v~l~~p~NPtG~~~~~ 228 (449)
T 3qgu_A 158 VAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDL-SKA--------KRTDIIFFCSPNNPTGAAATR 228 (449)
T ss_dssp EEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCG-GGC--------CCCSEEEEESSCTTTCCCCCH
T ss_pred EEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCCh-hHc--------CCCCEEEEeCCCCCCCCcCCH
Confidence 777788999999888766666 9999998765443321 110 12346666678999999865
Q ss_pred --HHHHHHHHHHcCCceeeeccccCCc
Q psy852 214 --LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 214 --l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+++|+++|+++|+++++|.+|+++.
T Consensus 229 ~~l~~l~~l~~~~~~~li~Dea~~~~~ 255 (449)
T 3qgu_A 229 AQLTELVNFARKNGSILVYDAAYALYI 255 (449)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTGGGC
T ss_pred HHHHHHHHHHHHCCcEEEEEcchHhhh
Confidence 7888889999999999999997643
No 323
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=98.41 E-value=1.7e-06 Score=97.03 Aligned_cols=244 Identities=9% Similarity=-0.043 Sum_probs=148.9
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC-CCc
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-NSL 541 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~-G~m 541 (891)
+|+ +++|+++++..++.+... +.-.|++..-.|.+...++...|.+++.+|.+++ ..+
T Consensus 111 ~v~--~t~G~~~al~~~~~~l~~-------------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 169 (404)
T 2o1b_A 111 EVC--ILYGTKNGLVAVPTCVIN-------------------PGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLP 169 (404)
T ss_dssp SEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCC
T ss_pred cEE--EcCCcHHHHHHHHHHhcC-------------------CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcC
Confidence 455 788999999888776421 1124777777888888888888999999999764 468
Q ss_pred CHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C-------CC---Ccc
Q psy852 542 RGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G-------IE---YAD 583 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G-------i~---~aD 583 (891)
|+++|++++++.++ .++++. ..|++. |.++ +| | +. ..|
T Consensus 170 d~~~l~~~l~~~~~----~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 245 (404)
T 2o1b_A 170 DWSKVDSQIIDKTK----LIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVA 245 (404)
T ss_dssp CGGGSCHHHHHHEE----EEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHE
T ss_pred CHHHHHHhhccCce----EEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCE
Confidence 99999999964321 222221 245442 3321 11 1 10 134
Q ss_pred EEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH--HhhHH
Q psy852 584 SFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG--LSGLQ 660 (891)
Q Consensus 584 SIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG--~~G~~ 660 (891)
-+..++||+++.| ..+|+++.+++ .+ +.+.....+ ..++ ...+.++++...+. .+.++
T Consensus 246 i~~~s~sK~~g~~G~r~G~~~~~~~-~~-~~l~~~~~~-----------~~~~------~~~~~~~a~~~~l~~~~~~~~ 306 (404)
T 2o1b_A 246 IEIYSLSKGYNMSGFRVGFAVGNKD-MI-QALKKYQTH-----------TNAG------MFGALQDAAIYALNHYDDFLE 306 (404)
T ss_dssp EEEEESTTTTTCGGGCCEEEEECHH-HH-HHHHHHHHH-----------HCCC------CCHHHHHHHHHHHHHCHHHHH
T ss_pred EEEEecchhccCchhheEeEecCHH-HH-HHHHHHHhh-----------ccCC------CCHHHHHHHHHHHhcCHHHHH
Confidence 6788999999755 46898877432 22 222110000 0001 11233444444443 35567
Q ss_pred HHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeecccc--CCeEE-
Q psy852 661 KYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQE--QNDEV- 736 (891)
Q Consensus 661 ~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~~--g~~~l- 736 (891)
+..++..++++++.+.|++. ++++..+.....+++++... ....++.+.|. +.|+.+..+.... +...+
T Consensus 307 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iR 379 (404)
T 2o1b_A 307 EQSNVFKTRRDRFEAMLAKA-DLPFVHAKGGIYVWLETPPG------YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVR 379 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCCEECCCBSSEEEEECCTT------CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCeecCCCcceEEEEeCCCC------CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEE
Confidence 77777888999999999887 67776433333477777521 13457788876 5798765444332 24566
Q ss_pred EEecCCCCHHHHHHHHHHHHHHH
Q psy852 737 FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 737 ~sv~~~tT~edId~li~~L~ei~ 759 (891)
++++. ++++|+++++.|++++
T Consensus 380 is~~~--~~e~l~~~l~~l~~~l 400 (404)
T 2o1b_A 380 ISLAL--DDQKLDEAAIRLTELA 400 (404)
T ss_dssp EECCS--CTTHHHHHHHHHHGGG
T ss_pred EEEcC--CHHHHHHHHHHHHHHH
Confidence 88875 6789999998887654
No 324
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=98.41 E-value=2.9e-06 Score=94.49 Aligned_cols=77 Identities=12% Similarity=0.063 Sum_probs=60.3
Q ss_pred EEecCC---CChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceE-EEeecccCccc-cccCHHHHHH
Q psy852 145 AYCSKE---AHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFF-VSTTLGTTSCC-SFDNLAEIGP 219 (891)
Q Consensus 145 v~~S~~---~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~-V~~t~Gtt~~G-avDpl~~I~~ 219 (891)
|+++.. .|+++...+...|.+++.| +|+++|++. .+ .+.+ |+++..+|.+| ...|+++|++
T Consensus 101 Vl~~~~~y~~~~~~~~~~~~~g~~~~~v-------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~ 166 (374)
T 2aeu_A 101 VIHYLPELPGHPSIERSCKIVNAKYFES-------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVIN 166 (374)
T ss_dssp EEEECSSSSCCTHHHHHHHHTTCEEEEE-------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHH
T ss_pred EEEecCCCCccHHHHHHHHHcCcEEEEe-------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHH
Confidence 555555 5778766666667788777 388888876 32 2456 77778899999 9999999999
Q ss_pred HHHHcCCceeeecccc
Q psy852 220 VAKEFDVWLHVDGAYA 235 (891)
Q Consensus 220 i~~~~~~~lHvDaA~G 235 (891)
+|+++|+++++|.++|
T Consensus 167 l~~~~~~~li~De~~~ 182 (374)
T 2aeu_A 167 TAKNKEAIVFVDDASG 182 (374)
T ss_dssp HHHHHTCCEEEECTTH
T ss_pred HHHHcCCEEEEECCcc
Confidence 9999999999999984
No 325
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=98.41 E-value=2.7e-05 Score=90.21 Aligned_cols=257 Identities=10% Similarity=0.012 Sum_probs=149.4
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC--CC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK--NS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~--G~ 540 (891)
+|+ +++|+++++..++.+... .+.-.|+++.-.|.+...++...|.+++.+|++++ +.
T Consensus 159 ~i~--~t~G~~~al~~~~~~l~~------------------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 218 (500)
T 3tcm_A 159 DIF--LTDGASPGVHLMMQLLIR------------------NEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWG 218 (500)
T ss_dssp GEE--EESSSHHHHHHHHHHHCC------------------STTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSB
T ss_pred cEE--EcCCHHHHHHHHHHHHcC------------------CCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCC
Confidence 566 788999999887766310 02235888899999999999999999999998765 48
Q ss_pred cCHHHHHHHHHhhhhcCCcc-EEEEec----CCccc-----------hhhh-----hc----------CC----------
Q psy852 541 LRGATLRQVMQQDETMGYIP-FFVSTT----LGTTS-----------CYRK-----SQ----------GI---------- 579 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip-~~Vvat----aGTT~-----------c~~~-----ld----------Gi---------- 579 (891)
+|+++|+++|++....+..+ ++++.+ .|++. |.++ +| +.
T Consensus 219 ~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~ 298 (500)
T 3tcm_A 219 LETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVR 298 (500)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHH
Confidence 99999999998865444333 222222 34432 3321 11 10
Q ss_pred ------CCccEEEE-cCcccC-Ccc-cccEEEEEe--CCccchhhhccCCCccccCCCCCccccCCcccccccccchHHH
Q psy852 580 ------EYADSFNV-NVNKWL-LTA-FDSSCLWVA--DRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLW 648 (891)
Q Consensus 580 ------~~aDSIs~-d~HK~L-~~P-~g~G~llvR--~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW 648 (891)
...+.|++ +.+|.+ +.| ..+|++++. +++.+.........+. + ...+.++
T Consensus 299 ~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~----------------~---~~~~~q~ 359 (500)
T 3tcm_A 299 SLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNL----------------C---SNITGQI 359 (500)
T ss_dssp HTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTC----------------C---CCHHHHH
T ss_pred HhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhccc----------------C---CCHHHHH
Confidence 11123443 899988 333 447888874 3332222111100000 0 0112222
Q ss_pred HHHHHH------------HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEE-EecCCcc-----hhhhhh-
Q psy852 649 FVIRTY------------GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCF-RLRSENN-----LIADQN- 709 (891)
Q Consensus 649 ~~L~~l------------G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~F-r~~~~~~-----~~~d~l- 709 (891)
++...+ -...+.++.++..+++++|.+.|++++++++.. ++.++..| ++..... ...+..
T Consensus 360 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~lp~~~~~~~~~~g~~~ 438 (500)
T 3tcm_A 360 LASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNE-AEGAMYVFPQICLPQKAIEAAKAANKAP 438 (500)
T ss_dssp HHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCC-CCBTTEECCEECCCHHHHHHHHHHTSCH
T ss_pred HHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEec-CCeEEEEeeeecCchhhHHHHHhcCCCc
Confidence 222222 113345566677888999999999998998864 44444333 3321100 000001
Q ss_pred HHH-HHHHHHhCCcEEEeeccc---cCCeEE-EEecCCCCHHHHHHHHHHHHHHHHH
Q psy852 710 NRK-LLEDINASGRLHMVPASQ---EQNDEV-FELQERKRKDDLAYKRSFFVRMLGL 761 (891)
Q Consensus 710 n~~-L~~~L~~~G~~~~s~s~~---~g~~~l-~sv~~~tT~edId~li~~L~ei~~~ 761 (891)
... +...|.+.|++++.++.. .+...+ +++. +++++|+++++.|.++...
T Consensus 439 ~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 439 DAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp HHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence 122 235566779886655443 334456 8887 7889999999999988753
No 326
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=98.40 E-value=2.5e-05 Score=88.01 Aligned_cols=249 Identities=8% Similarity=0.044 Sum_probs=148.0
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+... +.-.|++..-.|......+...|.+++.+|.+++| +|
T Consensus 110 ~i~--~t~G~~~al~~~~~~l~~-------------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d 167 (425)
T 2r2n_A 110 DLC--VTSGSQQGLCKVFEMIIN-------------------PGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESG-IV 167 (425)
T ss_dssp EEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEESSCCHHHHHHHGGGTCEEEEECEETTE-EC
T ss_pred cEE--EeCcHHHHHHHHHHHhCC-------------------CCCEEEEeCCCcHHHHHHHHHcCCEEEEeCcCCCC-CC
Confidence 566 788999999888766411 11247777788888888888889999999998765 99
Q ss_pred HHHHHHHHHhhh--------hcCCccEEEE----ecCCccc-----------hhhh--------------hcC-------
Q psy852 543 GATLRQVMQQDE--------TMGYIPFFVS----TTLGTTS-----------CYRK--------------SQG------- 578 (891)
Q Consensus 543 ~~~Le~aI~~d~--------~~g~ip~~Vv----ataGTT~-----------c~~~--------------ldG------- 578 (891)
+++|++++++.. ......++++ +..|++. |.++ ..|
T Consensus 168 ~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~ 247 (425)
T 2r2n_A 168 PDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFL 247 (425)
T ss_dssp HHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTG
T ss_pred HHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCcc
Confidence 999999997321 0111122232 2346553 3321 112
Q ss_pred -CC--CccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHH---H
Q psy852 579 -IE--YADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV---I 651 (891)
Q Consensus 579 -i~--~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~---L 651 (891)
+. ..+-+..+.+|+++ | .-+|+++..++ +.+.+.....+ ..++ ...+.++++ |
T Consensus 248 ~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~--l~~~l~~~~~~-----------~~~~------~~~~~q~a~~~~l 307 (425)
T 2r2n_A 248 SMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKP--LIERVILHIQV-----------STLH------PSTFNQLMISQLL 307 (425)
T ss_dssp GGCTTSCEEEEEESTTTTC-STTCCEEEEEEHH--HHHHHHHHHHT-----------TTCS------SCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEccchhhcc-CccceEEEecCHH--HHHHHHHHHHH-----------hcCC------CCHHHHHHHHHHH
Confidence 11 12345668999997 5 34799988754 22222110000 0011 112233333 3
Q ss_pred HHHHHhh----HHHHHHHHHHHHHHHHHHhcc-CCCcE-EeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEE
Q psy852 652 RTYGLSG----LQKYIRRHCELAKLFEGKVRR-DPRFE-ISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHM 725 (891)
Q Consensus 652 ~~lG~~G----~~~~i~~~~~lA~~L~~~L~~-~~~~e-il~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~ 725 (891)
+.++..+ ++++.++..++++++.+.|++ .+++. +..+.....+++++++.. + ..+.+.+.|.+.|+.+.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~----~-~~~~~~~~l~~~gv~v~ 382 (425)
T 2r2n_A 308 HEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN----D-VKELIEEKAVKMGVLML 382 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS----C-CHHHHHTHHHHTTEECE
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC----C-HHHHHHHHHHHCCcEEe
Confidence 3332223 344445566788888888887 57764 444444567778885421 1 12235777888898865
Q ss_pred eecccc-----CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 726 VPASQE-----QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 726 s~s~~~-----g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.+.... +...+ ++++. .++++|+++++.|++++
T Consensus 383 pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l 421 (425)
T 2r2n_A 383 PGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLI 421 (425)
T ss_dssp EGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHH
T ss_pred chhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHH
Confidence 544332 23566 88774 59999999999998876
No 327
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=98.40 E-value=7.4e-06 Score=91.00 Aligned_cols=84 Identities=8% Similarity=-0.016 Sum_probs=59.7
Q ss_pred CeEEEecCCCChHHHHHHHHcC------------CeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccc
Q psy852 142 KLMAYCSKEAHSCVEKAAMMAF------------VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCC 209 (891)
Q Consensus 142 ~~~v~~S~~~H~Sv~kaa~~~~------------~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~G 209 (891)
+-+++.+..-|.+...+...++ .++..++.+ |+++|++.+++. +.+|+++ .++.+|
T Consensus 129 ~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~-p~np~g 196 (406)
T 4adb_A 129 SGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYN-----DINSASALIDDS------TCAVIVE-PIQGEG 196 (406)
T ss_dssp CEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTT-----CHHHHHTTCSTT------EEEEEEC-SEETTT
T ss_pred cEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCC-----cHHHHHHHhcCC------eEEEEEe-CCcCCC
Confidence 3456667777777666665543 244555443 799999888643 4577777 455555
Q ss_pred -----cccCHHHHHHHHHHcCCceeeeccccCC
Q psy852 210 -----SFDNLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 210 -----avDpl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
..+++++|+++|+++|++|++|.+++|+
T Consensus 197 ~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~ 229 (406)
T 4adb_A 197 GVVPASNAFLQGLRELCNRHNALLIFDEVQTGV 229 (406)
T ss_dssp TSEECCHHHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 4468999999999999999999999764
No 328
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=98.39 E-value=7.6e-06 Score=90.92 Aligned_cols=262 Identities=12% Similarity=0.067 Sum_probs=148.0
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++.+++.+.. + +++ +++||++++..++.+++.....+.. ..++.+|+.+...|.+...+..+
T Consensus 84 ~~l~~~la~~~~~-~--~v~--~~~gg~~a~~~al~~~~~~~~~~~~----------~g~~~vi~~~~~y~~~~~~~~~~ 148 (406)
T 4adb_A 84 LRLAKKLIDATFA-D--RVF--FCNSGAEANEAALKLARKFAHDRYG----------SHKSGIVAFKNAFHGRTLFTVSA 148 (406)
T ss_dssp HHHHHHHHHHSSC-S--EEE--EESSHHHHHHHHHHHHHHHHHHHTC----------TTCCEEEEETTCCCCSSHHHHHH
T ss_pred HHHHHHHHhhCCC-C--eEE--EeCcHHHHHHHHHHHHHHHHHhcCC----------CCCcEEEEECCCcCCCcHHHhhc
Confidence 3455566666542 2 566 7889999999999888765433211 11245677777777776666555
Q ss_pred cC------------ceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEE---EecCCcc--c----------hhhh---
Q psy852 526 AF------------VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFV---STTLGTT--S----------CYRK--- 575 (891)
Q Consensus 526 ~g------------v~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~V---vataGTT--~----------c~~~--- 575 (891)
++ .++..+|. .|+++|+++|+++++ .+++ +.+.|.. . |.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~----~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~ 219 (406)
T 4adb_A 149 GGQPAYSQDFAPLPADIRHAAY-----NDINSASALIDDSTC----AVIVEPIQGEGGVVPASNAFLQGLRELCNRHNAL 219 (406)
T ss_dssp SSCGGGTGGGCSCCSSEEEECT-----TCHHHHHTTCSTTEE----EEEECSEETTTTSEECCHHHHHHHHHHHHHTTCE
T ss_pred cCCccccccCCCCCCCceEeCC-----CcHHHHHHHhcCCeE----EEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 43 23444444 268888887764321 1111 2222321 1 3331
Q ss_pred --hcC----C-------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcc
Q psy852 576 --SQG----I-------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGI 636 (891)
Q Consensus 576 --ldG----i-------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti 636 (891)
+|. + ...|.+++ ||+++....+|+++.+++ +.+.+.. . .. ..+.
T Consensus 220 li~De~~~~~~~~g~~~~~~~~~~~~d~~t~--sK~~~~G~r~G~~~~~~~--~~~~~~~---~-~~---------~~~~ 282 (406)
T 4adb_A 220 LIFDEVQTGVGRTGELYAYMHYGVTPDLLTT--AKALGGGFPVGALLATEE--CARVMTV---G-TH---------GTTY 282 (406)
T ss_dssp EEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHH--HHHTCCT---T-SS---------CCSS
T ss_pred EEEeccccCCCccchhHHHHhcCCCCCEEEe--chhhcCCCCeEEEEEcHH--HHhhhcc---C-Cc---------CCCC
Confidence 111 1 12577876 999985566899877654 2111110 0 00 0011
Q ss_pred cccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC-CcEEeCC--CceeEEEEEecCCcchhhhhhHHHH
Q psy852 637 PLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDP-RFEISND--VRLGLVCFRLRSENNLIADQNNRKL 713 (891)
Q Consensus 637 ~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~-~~eil~~--~~~~iV~Fr~~~~~~~~~d~ln~~L 713 (891)
....+.+++.+..+......+..++..++++++.+.|++.. .+.++.+ ...+++.|.+.... .....++
T Consensus 283 ----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~ 354 (406)
T 4adb_A 283 ----GGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADY----AGQAKQI 354 (406)
T ss_dssp ----TTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTT----TTCHHHH
T ss_pred ----CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCc----HHHHHHH
Confidence 11123333333333221125667777888888888887642 1111111 12357778875421 1246788
Q ss_pred HHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 714 LEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 714 ~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+.|.++|+.+..+ +...+ ++++..+|++||+++++.|++++.
T Consensus 355 ~~~l~~~gi~v~~~----~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 398 (406)
T 4adb_A 355 SQEAAKAGVMVLIA----GGNVVRFAPALNVSEEEVTTGLDRFAAACE 398 (406)
T ss_dssp HHHHHHTTEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCcEEeec----CCCeEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 89999999874332 34566 888888999999999999998874
No 329
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.38 E-value=3.8e-06 Score=94.28 Aligned_cols=88 Identities=8% Similarity=-0.086 Sum_probs=71.1
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEE-eecccCccccccCHH---HHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS-TTLGTTSCCSFDNLA---EIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~-~t~Gtt~~GavDpl~---~I~~ 219 (891)
.|++..-+|.+....+...|.+++.|+++++| +|+++|++++++. ..+.+|. ....+|.||.+-|.+ +|++
T Consensus 126 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 200 (423)
T 3ez1_A 126 KMIVTVPGYDRHFLLLQTLGFELLTVDMQSDG-PDVDAVERLAGTD----PSVKGILFVPTYSNPGGETISLEKARRLAG 200 (423)
T ss_dssp EEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHHSC----TTEEEEEECSSSCTTTCCCCCHHHHHHHHT
T ss_pred EEEEcCCCcHHHHHHHHHcCCEEEeccCCCCC-CCHHHHHHHHhhC----CCceEEEECCCCCCCCCcCCCHHHHHHHHH
Confidence 47777888999888887778899999998876 9999999999621 1134554 447899999998888 8888
Q ss_pred HH-HHcCCceeeeccccC
Q psy852 220 VA-KEFDVWLHVDGAYAG 236 (891)
Q Consensus 220 i~-~~~~~~lHvDaA~GG 236 (891)
+| +++|+++++|.+|+.
T Consensus 201 ~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 201 LQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp CCCSSTTCEEEEECTTSS
T ss_pred HHHhccCCEEEEECCcch
Confidence 88 899999999999953
No 330
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=98.38 E-value=1e-05 Score=91.17 Aligned_cols=233 Identities=12% Similarity=0.098 Sum_probs=141.2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHH----HHHHcCceEEEecCCCCCCcCH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK----AAMMAFVRLKILEPDDKNSLRG 543 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~K----aa~l~gv~v~~Vp~d~~G~mD~ 543 (891)
+++||++++..++.+.- + +.-.|+++...|.+... .+...|++++.+|.+ |+
T Consensus 82 ~~~~g~~ai~~~~~~l~----~---------------~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~ 137 (404)
T 1e5e_A 82 ATSSGMGAIAATVLTIL----K---------------AGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-----IP 137 (404)
T ss_dssp EESSHHHHHHHHHHHHC----C---------------TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----ST
T ss_pred EeCChHHHHHHHHHHHh----C---------------CCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CH
Confidence 45677888887776531 0 12247888889988877 566788999999886 88
Q ss_pred HHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhh-h-----hcC-----C------CCccEEEEcCcccCCc
Q psy852 544 ATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYR-K-----SQG-----I------EYADSFNVNVNKWLLT 595 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~-~-----ldG-----i------~~aDSIs~d~HK~L~~ 595 (891)
++|+++|++.+ ..++++. ..|... |.+ + +|. . -.+|.+..++||++++
T Consensus 138 ~~l~~~i~~~t----~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~ 213 (404)
T 1e5e_A 138 GEVKKHMKPNT----KIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYING 213 (404)
T ss_dssp THHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTC
T ss_pred HHHHHhcCCCC----cEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCC
Confidence 89999887532 1233332 234443 555 3 222 1 1479999999999999
Q ss_pred ccc--cEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q psy852 596 AFD--SSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLF 673 (891)
Q Consensus 596 P~g--~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L 673 (891)
|.+ +|+++.+++ .+.+.+.....+. ++. ....+.+|+.++.+ +.+...+++..++++++
T Consensus 214 ~g~ri~G~~~~~~~-~~~~~l~~~~~~~------------~g~----~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l 274 (404)
T 1e5e_A 214 HTDVVAGLICGKAD-LLQQIRMVGIKDI------------TGS----VISPHDAWLITRGL--STLNIRMKAESENAMKV 274 (404)
T ss_dssp SSCCCCEEEEECHH-HHHHHHHTCCCCC------------CCC----CCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEECHH-HHHHHHHHHHHhC------------CCC----CCCHHHHHHHHHhH--hHHHHHHHHHHHHHHHH
Confidence 987 688888764 2221222111110 010 11234566665544 34566677778888888
Q ss_pred HHHhccCCCcE-EeCC------------C----ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc------
Q psy852 674 EGKVRRDPRFE-ISND------------V----RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ------ 730 (891)
Q Consensus 674 ~~~L~~~~~~e-il~~------------~----~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~------ 730 (891)
.+.|++.+.++ ++.+ + ..++++|++.+. .+.+.+.|.+.|++.. +.+.
T Consensus 275 ~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~l~~~~i~~~-~~s~G~~~sl 345 (404)
T 1e5e_A 275 AEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSG--------FEGAKKLLDNLKLITL-AVSLGGCESL 345 (404)
T ss_dssp HHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTH--------HHHHHHHHHTCSSSEE-SSCCCSSSCE
T ss_pred HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCC--------HHHHHHHHHhCCCcee-ccCCCCccee
Confidence 88887765443 1111 1 267899988531 2334455666776322 2110
Q ss_pred -------------------cC--CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 -------------------EQ--NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 -------------------~g--~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+ ...+ ++++. ||++.+++.|+++..
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~ 393 (404)
T 1e5e_A 346 IQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLD 393 (404)
T ss_dssp EECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred eecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence 12 3566 98876 889999999988763
No 331
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=98.37 E-value=2.7e-05 Score=87.71 Aligned_cols=256 Identities=9% Similarity=-0.007 Sum_probs=148.2
Q ss_pred HHHHHHHHHhhccC-CccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 446 CELAKLFEGKVRRD-PRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 446 lelAr~l~~~L~~~-~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
.++++.+++.+... ++ +|+ +++|++|+|..++.+++... ++-+|+....-|.+...++.
T Consensus 89 ~~l~~~la~~~~~~~~~-~v~--~~~gg~ea~~~ai~~~~~~~-----------------~~~vi~~~p~yh~~~~~~~~ 148 (419)
T 2eo5_A 89 LELAKKLVTYSPGNFQK-KVF--FSNSGTEAIEASIKVVKNTG-----------------RKYIIAFLGGFHGRTFGSIS 148 (419)
T ss_dssp HHHHHHHHHHSSCSSCE-EEE--EESSHHHHHHHHHHHHHTTS-----------------CCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHhCCCCcCC-EEE--EeCchHHHHHHHHHHHHHhh-----------------CCcEEEECCCcCCCCHhhHh
Confidence 45666677766532 33 566 78999999999998876411 12345555667765555554
Q ss_pred HcC-------------ceEEEecCCCCCC----------------cCHHHHH-HHHHhhhhcCCccEEEEe----cCCcc
Q psy852 525 MAF-------------VRLKILEPDDKNS----------------LRGATLR-QVMQQDETMGYIPFFVST----TLGTT 570 (891)
Q Consensus 525 l~g-------------v~v~~Vp~d~~G~----------------mD~~~Le-~aI~~d~~~g~ip~~Vva----taGTT 570 (891)
+.+ .+++.+|.+.+.+ +|+++|+ ++|++......+.++++. +.|+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~ 228 (419)
T 2eo5_A 149 LTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYV 228 (419)
T ss_dssp HCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSB
T ss_pred hcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCc
Confidence 321 2577888765433 4788999 888742100112233332 24542
Q ss_pred c------------hhhh-----hc---------C----C----CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhc
Q psy852 571 S------------CYRK-----SQ---------G----I----EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALV 615 (891)
Q Consensus 571 ~------------c~~~-----ld---------G----i----~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~ 615 (891)
. |.++ +| | + ...|.++++ |.++.+ .++|+++.+++. . .+.
T Consensus 229 ~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~s--K~~~~G~~riG~~~~~~~~-~--~~~ 303 (419)
T 2eo5_A 229 IPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLA--KALGGGIMPIGATIFRKDL-D--FKP 303 (419)
T ss_dssp CCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCEEEEEEGGG-C--CC-
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEec--ccccCCccceEEEEEchHh-h--cCC
Confidence 2 3321 11 1 0 124777655 888877 889999987652 1 111
Q ss_pred cCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEE
Q psy852 616 VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVC 695 (891)
Q Consensus 616 ~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~ 695 (891)
.. . ..+.. ...+.+.+++..+.. +.+..++..+++++|.+.|++. +..+ ++..+++.
T Consensus 304 ---~~-~----------~~t~~----~n~~~~~aa~aal~~--~~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~g~~~~ 360 (419)
T 2eo5_A 304 ---GM-H----------SNTFG----GNALACAIGSKVIDI--VKDLLPHVNEIGKIFAEELQGL--ADDV-RGIGLAWG 360 (419)
T ss_dssp -------------------CCC----CCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTS--SSEE-EEETTEEE
T ss_pred ---cc-c----------CCCCC----CCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHh--hhhe-EeeeEEEE
Confidence 00 0 00110 112333333333321 2236677788899999999875 2222 23446777
Q ss_pred EEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 696 FRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 696 Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
|.+.+. ..... +.+.|.+.|+++.... ...+ ++++..+|++|++++++.|++++
T Consensus 361 i~~~~~-----~~~~~-~~~~l~~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~~l 415 (419)
T 2eo5_A 361 LEYNEK-----KVRDR-IIGESFKRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKKVI 415 (419)
T ss_dssp EECSCH-----HHHHH-HHHHHHHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEecC-----ccHHH-HHHHHHHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 777431 12355 8888888998754332 3456 98888899999999999999876
No 332
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=98.37 E-value=3.6e-06 Score=94.13 Aligned_cols=249 Identities=10% Similarity=0.051 Sum_probs=152.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC----C
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD----K 538 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~----~ 538 (891)
+|+ +++|+++++..++.+... +.-.|++..-.|.+...++...|.+++.+|.+. +
T Consensus 93 ~i~--~~~g~~~a~~~~~~~~~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 151 (422)
T 3fvs_A 93 NVL--VTVGGYGALFTAFQALVD-------------------EGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQN 151 (422)
T ss_dssp HEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCS
T ss_pred cEE--EECChHHHHHHHHHHHcC-------------------CCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccc
Confidence 455 688999999888766411 122477777788888888888899999999876 3
Q ss_pred --------CCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C----
Q psy852 539 --------NSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G---- 578 (891)
Q Consensus 539 --------G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G---- 578 (891)
+.+|+++|++++++++ ..++++. ..|++. |.++ +| |
T Consensus 152 G~~~~~~~~~~d~~~l~~~~~~~~----~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 227 (422)
T 3fvs_A 152 GELGSSSNWQLDPMELAGKFTSRT----KALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHI 227 (422)
T ss_dssp SSCCBGGGSBCCHHHHHTTCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCC
T ss_pred cccccccCCCCCHHHHHhhcCCCc----eEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCC
Confidence 4799999999987532 1223322 245443 3321 11 1
Q ss_pred ----CC---CccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 579 ----IE---YADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 579 ----i~---~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
+. ..+-+..+.||.++.| ..+|+++.+++ +.+.+.....+ ..++ ...+.+++.
T Consensus 228 ~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~--~~~~~~~~~~~-----------~~~~------~~~~~~~a~ 288 (422)
T 3fvs_A 228 SIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDH--IMKHLRTVHQN-----------SVFH------CPTQSQAAV 288 (422)
T ss_dssp CGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHH--HHHHHHHHHHT-----------TTCC------CCHHHHHHH
T ss_pred ChhhcccccCcEEEEecchhccCCccceEEEEEeCHH--HHHHHHHHHhh-----------ccCC------CCcHHHHHH
Confidence 00 1235566889999755 67888877543 22211100000 0011 112333344
Q ss_pred HHHHH---------HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhh--------hhHHHH
Q psy852 651 IRTYG---------LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIAD--------QNNRKL 713 (891)
Q Consensus 651 L~~lG---------~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d--------~ln~~L 713 (891)
...+. ...+++..++..++++++.+.|++. ++++..+.....+++.+..... ..+ ....++
T Consensus 289 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 366 (422)
T 3fvs_A 289 AESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDISDFKR-KMPDLPGAVDEPYDRRF 366 (422)
T ss_dssp HHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHH-HCCCCCCCTTCCHHHHH
T ss_pred HHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEechhhcc-cccccccccccccHHHH
Confidence 44432 3456777788889999999999987 7887766556667777643100 000 004466
Q ss_pred HHHH-HhCCcEEEeeccc-------cCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 714 LEDI-NASGRLHMVPASQ-------EQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 714 ~~~L-~~~G~~~~s~s~~-------~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
...| .+.|+++..+..+ .+...+ +++.. ++++|+++++.|+++.
T Consensus 367 ~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~l 419 (422)
T 3fvs_A 367 VKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--DEATLQAMDEKLRKWK 419 (422)
T ss_dssp HHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC--CHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 6665 4579876655543 245666 88765 9999999999998765
No 333
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=98.37 E-value=4e-06 Score=92.09 Aligned_cols=251 Identities=12% Similarity=0.076 Sum_probs=140.0
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+.. +. +++ +++|+++++..++.++|.... +.. .| .+-+++.+..-|.+...+..++
T Consensus 74 ~l~~~la~~~g~-~~-~v~--~~~g~t~a~~~~~~~~~~~~~-~~~-------~g---~~~vl~~~~~y~~~~~~~~~~~ 138 (375)
T 2eh6_A 74 ELAHKLVKHFWT-EG-KVF--FANSGTESVEAAIKLARKYWR-DKG-------KN---KWKFISFENSFHGRTYGSLSAT 138 (375)
T ss_dssp HHHHHHHHTSSS-CE-EEE--EESSHHHHHHHHHHHHHHHHH-HTT-------CC---CCEEEEEBTCCCCSSHHHHHHC
T ss_pred HHHHHHHhhcCC-CC-eEE--EeCchHHHHHHHHHHHHHHhc-cCC-------CC---CCEEEEECCCcCCCchhhhhhc
Confidence 444555555533 32 455 788999999999887654221 000 01 1223444444466555554443
Q ss_pred Cce------------EEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEE---EecCCccc------------hhhh----
Q psy852 527 FVR------------LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFV---STTLGTTS------------CYRK---- 575 (891)
Q Consensus 527 gv~------------v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~V---vataGTT~------------c~~~---- 575 (891)
+.. +..+|. +|+++|+++|+++++ .+++ .+..|+.. |.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~----~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~l 209 (375)
T 2eh6_A 139 GQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDEETA----GIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLL 209 (375)
T ss_dssp BCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCTTEE----EEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEE
T ss_pred CCccccCCCCCCCCCceeCCC-----chHHHHHHHhcCCeE----EEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEE
Confidence 211 344443 478888887764211 1222 22335542 3221
Q ss_pred -hc---------C----C----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccc
Q psy852 576 -SQ---------G----I----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIP 637 (891)
Q Consensus 576 -ld---------G----i----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~ 637 (891)
+| + + ..+|.++++ |+++++.++|+++++++ +.+.+... .+ . ..++
T Consensus 210 i~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~~--~~~~~~~~-~~---~-------~~~~-- 272 (375)
T 2eh6_A 210 IIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILAREE--VAQSFTPG-SH---G-------STFG-- 272 (375)
T ss_dssp EEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEHH--HHTTCCTT-SC---C-------CSST--
T ss_pred EEeccccCCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcHH--HHhhhcCC-CC---C-------CCCC--
Confidence 11 1 0 127888888 88888899999999764 22222110 00 0 0111
Q ss_pred ccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHH
Q psy852 638 LSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDI 717 (891)
Q Consensus 638 ~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L 717 (891)
...+.++..+..+... .+..++..++++++.+.|++.+...+ ++..++++|++.. ...++.+.|
T Consensus 273 ----~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~~~~~~~--------~~~~~~~~l 336 (375)
T 2eh6_A 273 ----GNPLACRAGTVVVDEV--EKLLPHVREVGNYFKEKLKELGKGKV--KGRGLMLGLELER--------ECKDYVLKA 336 (375)
T ss_dssp ----TCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSSEE--EEETTEEEEECSS--------CCHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEEEEEEEcC--------cHHHHHHHH
Confidence 1123333333222221 16677788899999999988654222 2344677887742 135677888
Q ss_pred HhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 718 NASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 718 ~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
.++|+....+ +...+ ++++..++++|++++++.|+++
T Consensus 337 ~~~gi~~~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 337 LEKGLLINCT----AGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp HHTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 8889774322 34456 8888889999999999999864
No 334
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=98.37 E-value=2.6e-05 Score=89.81 Aligned_cols=283 Identities=10% Similarity=0.030 Sum_probs=149.4
Q ss_pred HHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 445 HCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
..++++.+.+.+..... +++ ++.||+|+|..++.++|.....+. ...++-+|.....-|-...-+..
T Consensus 101 ~~~lae~l~~~~~~~~~-~v~--~~~sGseA~~~aik~a~~~~~~~g----------~~~~~~ii~~~~~yHg~t~~~~~ 167 (472)
T 3hmu_A 101 AIALAQKLAELAPGDLN-HVF--FAGGGSEANDTNIRMVRTYWQNKG----------QPEKTVIISRKNAYHGSTVASSA 167 (472)
T ss_dssp HHHHHHHHHHHSCTTEE-EEE--EESSHHHHHHHHHHHHHHHHHHTT----------CTTCCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHHhCCCCCC-EEE--EeCCHHHHHHHHHHHHHHHHHhcC----------CCCCCEEEEEcCcCCCccHHhhh
Confidence 34566666666532112 455 778999999999999998654221 11123345445555544333333
Q ss_pred HcCc-----------eEEEecCCC-----CCCcC--------HHHHHHHHHhhhhcCCccEEEE-e---cCCccc-----
Q psy852 525 MAFV-----------RLKILEPDD-----KNSLR--------GATLRQVMQQDETMGYIPFFVS-T---TLGTTS----- 571 (891)
Q Consensus 525 l~gv-----------~v~~Vp~d~-----~G~mD--------~~~Le~aI~~d~~~g~ip~~Vv-a---taGTT~----- 571 (891)
+.+. .+..+|... ++ +| +++|+++|++... ..+.++++ . +.|...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~-~~~aavi~epv~~~gG~~~~~~~~ 245 (472)
T 3hmu_A 168 LGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE-NRVAAFIAEPVQGAGGVIVAPDSY 245 (472)
T ss_dssp HSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG-GGEEEEEECSSBSTTTCBCCCTTH
T ss_pred ccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC-CCEEEEEEcCccCCCCcccCCHHH
Confidence 3221 344555322 22 44 7888888864211 11222232 1 223222
Q ss_pred -------hhhh-----hc----CC-------------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCcc
Q psy852 572 -------CYRK-----SQ----GI-------------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYL 621 (891)
Q Consensus 572 -------c~~~-----ld----Gi-------------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl 621 (891)
|.++ +| |+ -..|-++++ |.++.. .+.|+++.+++ +.+.+. ...+
T Consensus 246 l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~s--K~l~gg~~plG~v~~~~~--i~~~~~--~~~~ 319 (472)
T 3hmu_A 246 WPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIA--KGLSSGYAPIGGSIVCDE--VAHVIG--KDEF 319 (472)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTTTSSCCEEEEEEHH--HHHHHT--TSCB
T ss_pred HHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeec--hhhhcCCcceEEEEECHH--HHHhcc--cCCc
Confidence 3331 11 11 125788776 988876 57788888654 323331 1111
Q ss_pred ccCCCCCccccCCcccccccccchHHHH---HHHHHHHhhHHHHHHHHH-HHHHHHHHHhccC---CCcEEeCCCceeEE
Q psy852 622 QHGHEGAIDYRHWGIPLSRRFRSLKLWF---VIRTYGLSGLQKYIRRHC-ELAKLFEGKVRRD---PRFEISNDVRLGLV 694 (891)
Q Consensus 622 ~~~~e~~~~~~~~ti~~SRr~~aL~lW~---~L~~lG~~G~~~~i~~~~-~lA~~L~~~L~~~---~~~eil~~~~~~iV 694 (891)
.+. .+.. ...+.+.+ +|+.+..+. .+++.. ++.+++.+.|+++ +.+..+. ..-+++
T Consensus 320 ~~~---------~t~~----~np~a~aAa~aaL~~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr-~~G~~~ 382 (472)
T 3hmu_A 320 NHG---------YTYS----GHPVAAAVALENLRILEEEN---ILDHVRNVAAPYLKEKWEALTDHPLVGEAK-IVGMMA 382 (472)
T ss_dssp CCC---------CTTT----TCHHHHHHHHHHHHHHHHTT---HHHHHHHTHHHHHHHHHHGGGGSTTEEEEE-EETTEE
T ss_pred ccc---------CCCC----CCHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-ecCceE
Confidence 110 1111 12233333 344333333 344455 5666666666543 4333321 233566
Q ss_pred EEEecCCcch--hh----hhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q psy852 695 CFRLRSENNL--IA----DQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLGLVCFRLR 767 (891)
Q Consensus 695 ~Fr~~~~~~~--~~----d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~~~~~~l~ 767 (891)
.|.+.+.... .. ......+.+.|.++|+++... + ..+ |++....|++|||++++.|++.+..+.+.+.
T Consensus 383 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~~~~~ 457 (472)
T 3hmu_A 383 SIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV----G-DRMIISPPLVITPAEIDEMFVRIRKSLDEAQAEIE 457 (472)
T ss_dssp EEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE----T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777532110 00 223667889999999874432 2 556 8888889999999999999998865554444
Q ss_pred ccC
Q psy852 768 SEN 770 (891)
Q Consensus 768 ~~~ 770 (891)
.+.
T Consensus 458 ~~~ 460 (472)
T 3hmu_A 458 KQG 460 (472)
T ss_dssp HHT
T ss_pred HHh
Confidence 443
No 335
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.37 E-value=6.4e-06 Score=92.73 Aligned_cols=223 Identities=7% Similarity=-0.086 Sum_probs=130.6
Q ss_pred eEEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE----ecCCccc-----------
Q psy852 507 LMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS----TTLGTTS----------- 571 (891)
Q Consensus 507 ~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv----ataGTT~----------- 571 (891)
-.|++..-+|.+...++...|.+++.+|++++| +|+++|+++|+.. ....++++ +..|++.
T Consensus 134 d~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~---~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~ 209 (427)
T 3ppl_A 134 VKWICPVPGYDRHFSITERFGFEMISVPMNEDG-PDMDAVEELVKNP---QVKGMWVVPVFSNPTGFTVTEDVAKRLSAM 209 (427)
T ss_dssp CEEEEEESCCHHHHHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTST---TEEEEEECCSSCTTTCCCCCHHHHHHHHHC
T ss_pred CEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhcC---CCeEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 357788888999988999999999999998887 9999999999421 11122222 2245553
Q ss_pred h-hhh-----hcC-------------------------CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCc
Q psy852 572 C-YRK-----SQG-------------------------IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLY 620 (891)
Q Consensus 572 c-~~~-----ldG-------------------------i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Y 620 (891)
| .++ .|. ....+-+..+.+|+++....+|+++...+ +.+.+.....+
T Consensus 210 a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~--l~~~~~~~~~~ 287 (427)
T 3ppl_A 210 ETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAE--NRKWYTGHAGI 287 (427)
T ss_dssp CCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHH--HHHHHHHHHHH
T ss_pred HhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHH--HHHHHHHHhhc
Confidence 5 431 111 11224556789999666678887776532 22222110000
Q ss_pred cccCCCCCccccCCcccccccccchHHHHHHHHHHH-h----hHHHHHHHHHHHHHHHHHHh----ccCCCcEEeCCCce
Q psy852 621 LQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL-S----GLQKYIRRHCELAKLFEGKV----RRDPRFEISNDVRL 691 (891)
Q Consensus 621 l~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~-~----G~~~~i~~~~~lA~~L~~~L----~~~~~~eil~~~~~ 691 (891)
. .-....+.++.....+.. . .+.+..+...+..+++.+.| ...+++++..+...
T Consensus 288 ~-----------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g 350 (427)
T 3ppl_A 288 R-----------------GIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGG 350 (427)
T ss_dssp H-----------------CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBS
T ss_pred c-----------------cCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCcc
Confidence 0 001122334444444332 1 22333333334444454444 33445776655556
Q ss_pred eEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc-c-----cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 692 GLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS-Q-----EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 692 ~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~-~-----~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..+++++++. ....+.+.|.+.|+.+..+.. . .+...+ +++... ++++|+++++.|.+++.
T Consensus 351 ~~~~~~~~~~-------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~ 418 (427)
T 3ppl_A 351 YFISLDVVPG-------TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVL 418 (427)
T ss_dssp SCEEEECSTT-------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCcc-------hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHH
Confidence 6778888542 356788888889987544221 1 234566 888655 99999999999998874
No 336
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.36 E-value=1.2e-05 Score=89.86 Aligned_cols=94 Identities=13% Similarity=-0.029 Sum_probs=70.7
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEec-CCCCcccHHHHHHHHHhhhhcCCcceEEEeecc-cCccccccCHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEP-DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLG-TTSCCSFDNLAEIGPVA 221 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~-d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~G-tt~~GavDpl~~I~~i~ 221 (891)
.|+++.-.|.+....+...|.+++.++. ++++.+|+++|++.+++....+ ...+++++.. +|.+|.+-|.+++.+++
T Consensus 127 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~ 205 (413)
T 3t18_A 127 PLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDS-DRIASLINSPGNNPTGYSLSDEEWDEVI 205 (413)
T ss_dssp EEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred EEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcC-CCEEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 3777777898888888777889999998 5567999999999998632111 1235555555 89999998877666555
Q ss_pred H---------HcCCceeeeccccCCc
Q psy852 222 K---------EFDVWLHVDGAYAGSS 238 (891)
Q Consensus 222 ~---------~~~~~lHvDaA~GG~~ 238 (891)
+ ++|++|++|.+|+++.
T Consensus 206 ~~~~~~~~~~~~~~~li~De~y~~~~ 231 (413)
T 3t18_A 206 TFLKEKAEDKDKKITLIVDVAYLEFA 231 (413)
T ss_dssp HHHHHHTTSTTCEEEEEEECTTGGGS
T ss_pred HHHHHHhhccCCcEEEEEeccccccc
Confidence 4 8999999999986544
No 337
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=98.36 E-value=2.2e-05 Score=88.54 Aligned_cols=261 Identities=13% Similarity=0.066 Sum_probs=149.4
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++.+++.+.. + +++ +++||+|++..++.+++.....+.. ..+.-+|+....-|.+...++.+
T Consensus 102 ~~l~~~la~~~g~-~--~v~--~~~ggteA~~~al~~~~~~~~~~~~----------~g~~~vi~~~~~yh~~~~~~~~~ 166 (420)
T 2pb2_A 102 LRLGRKLIDATFA-E--RVL--FMNSGTEANETAFKLARHYACVRHS----------PFKTKIIAFHNAFHGRSLFTVSV 166 (420)
T ss_dssp HHHHHHHHHHSSC-S--EEE--EESSHHHHHHHHHHHHHHHHHHHTC----------TTCCEEEEETTCCCCSSHHHHHH
T ss_pred HHHHHHHHhhCCC-C--eEE--EeCCHHHHHHHHHHHHHHHhhhccC----------CCCCEEEEEeCCcCCcCHHHHHh
Confidence 4455566665531 2 455 7789999999999998875432210 01123555666777766666555
Q ss_pred cCc------------eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEE---EecCCccc------------hhhh---
Q psy852 526 AFV------------RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFV---STTLGTTS------------CYRK--- 575 (891)
Q Consensus 526 ~gv------------~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~V---vataGTT~------------c~~~--- 575 (891)
.+. ++..+|.+ |+++|+++|++.++ .+++ .++.|... |.++
T Consensus 167 ~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~~~~----~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~ 237 (420)
T 2pb2_A 167 GGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDDHTC----AVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQAL 237 (420)
T ss_dssp SSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCTTEE----EEEECSEETTTTSEECCHHHHHHHHHHHHHTTCE
T ss_pred cCCccccccCCCCCCCeEEecCC-----CHHHHHHHhccCce----EEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCE
Confidence 442 25666652 79999998875321 1122 22334311 3331
Q ss_pred --hc----CC-------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcc
Q psy852 576 --SQ----GI-------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGI 636 (891)
Q Consensus 576 --ld----Gi-------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti 636 (891)
+| |+ -..|.+++ +|+++..+++|+++.+++ +.+.+.. . .. ..+.
T Consensus 238 lI~Dev~~g~~~~g~~~~~~~~~~~~diit~--sK~l~~G~~iG~~~~~~~--l~~~l~~--~--~~---------~~t~ 300 (420)
T 2pb2_A 238 LVFDEVQCGMGRTGDLFAYMHYGVTPDILTS--AKALGGGFPVSAMLTTQE--IASAFHV--G--SH---------GSTY 300 (420)
T ss_dssp EEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSCCEEEEECHH--HHTTCC-----------------CCEE
T ss_pred EEEEcCCcCcccCCcHHHHHhcCCCCCeEEe--cccccCCCceEEEEEhHH--HHHhhcC--C--Cc---------Cccc
Confidence 11 11 12587765 799997788999999764 3222211 0 00 0111
Q ss_pred cccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC----CCcEEeCCCceeEEEEEecCCcchhhhhhHHH
Q psy852 637 PLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD----PRFEISNDVRLGLVCFRLRSENNLIADQNNRK 712 (891)
Q Consensus 637 ~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~----~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~ 712 (891)
. .-++.......+|+.+.. .+..++..+++++|.+.|++. +.+..+ ++..+++.|.+.+.. .....+
T Consensus 301 ~-~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~~----~~~~~~ 371 (420)
T 2pb2_A 301 G-GNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPKY----KGRARD 371 (420)
T ss_dssp C-CCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGGG----TTCHHH
T ss_pred C-cCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEECCCc----hHHHHH
Confidence 1 111222233344444433 456677778888888888764 332222 234467778775320 113567
Q ss_pred HHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 713 LLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 713 L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+.+.|.+.|+++..+ +...+ +++...+|++|++++++.|++++.
T Consensus 372 l~~~l~~~Gi~v~~~----~~~~iRl~~~~~~t~eei~~~~~~l~~~l~ 416 (420)
T 2pb2_A 372 FLYAGAEAGVMVLNA----GADVMRFAPSLVVEEADIHEGMQRFAQAVG 416 (420)
T ss_dssp HHHHHHHTTEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEeC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 888998899874332 24456 888778999999999999998764
No 338
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=98.35 E-value=2.9e-05 Score=88.13 Aligned_cols=261 Identities=10% Similarity=0.060 Sum_probs=139.1
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCcccccccccc-ceEEEecccchHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLS-KLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~-~~vI~~S~~aH~Sv~Kaa~ 524 (891)
.++++.+++.+. .+ +++ +++||+|+|..++.++|...... .|...+ +-+|+....-|.+...++.
T Consensus 110 ~~l~~~la~~~g-~~--~v~--~~~sGseA~~~al~~a~~~~~~~---------~g~~~gr~~vi~~~~~yhg~~~~~~~ 175 (433)
T 1z7d_A 110 GICERYLTNLLG-YD--KVL--MMNTGAEANETAYKLCRKWGYEV---------KKIPENMAKIVVCKNNFSGRTLGCIS 175 (433)
T ss_dssp HHHHHHHHHHHT-CS--EEE--EESSHHHHHHHHHHHHHHHHHHT---------SCCCTTCCEEEEETTC----------
T ss_pred HHHHHHHHhhcC-CC--eEE--EeCCHHHHHHHHHHHHHHHhhhc---------cCCCCCCCeEEEEeCCcCCcchhhhc
Confidence 445555555553 12 455 67899999999999988643211 111112 3345555566766655544
Q ss_pred HcC------------ceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe----cCCccc------------hhhh-
Q psy852 525 MAF------------VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST----TLGTTS------------CYRK- 575 (891)
Q Consensus 525 l~g------------v~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva----taGTT~------------c~~~- 575 (891)
+.+ .++..+|.+ |+++|+++|+.. .+-++++. +.|... |.++
T Consensus 176 ~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g 246 (433)
T 1z7d_A 176 ASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKDP----NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYN 246 (433)
T ss_dssp ----------------CEEEECTT-----CHHHHHHHHTST----TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTT
T ss_pred ccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCCC----CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcC
Confidence 433 245566653 899999999521 12222222 235432 4331
Q ss_pred ----hc----CC-------------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccC
Q psy852 576 ----SQ----GI-------------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRH 633 (891)
Q Consensus 576 ----ld----Gi-------------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~ 633 (891)
+| |+ -..|.+++ .|++++. +..|+++.+++ +.+.+.. .. ..
T Consensus 247 ~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~--sK~l~~G~~~~G~v~~~~~--~~~~l~~--~~-----------~~ 309 (433)
T 1z7d_A 247 VLFVADEVQTGLGRTGKLLCVHHYNVKPDVILL--GKALSGGHYPISAVLANDD--IMLVIKP--GE-----------HG 309 (433)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTSSCCEEEEECHH--HHTTCCT--TC-----------CC
T ss_pred CEEEEecCccCCCcCCcchhhHhcCCCCCEEEE--CccccCCCCCeEEEEECHH--HHhhhcc--cc-----------cc
Confidence 11 11 12577755 5999865 56899998754 2222111 00 01
Q ss_pred CcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC----CCcEEeCCCceeEEEEEecCCcchhhhhh
Q psy852 634 WGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD----PRFEISNDVRLGLVCFRLRSENNLIADQN 709 (891)
Q Consensus 634 ~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~----~~~eil~~~~~~iV~Fr~~~~~~~~~d~l 709 (891)
.+.. .-+........+|+.+..+ +..++..+++++|.+.|++. +.+..+ +...+++.|.+.+. ...
T Consensus 310 ~t~~-~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~~-----~~~ 379 (433)
T 1z7d_A 310 STYG-GNPLAASICVEALNVLINE---KLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKNE-----LVN 379 (433)
T ss_dssp CTTT-TCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECTT-----TCC
T ss_pred ccCC-CCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEccC-----hhH
Confidence 1111 1122223334455544433 34566677888888888654 322221 22346778887532 023
Q ss_pred HHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 710 NRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 710 n~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..++.+.|.++|+++. +. +...+ ++++..+|++|||++++.|++++.
T Consensus 380 ~~~~~~~l~~~Gv~v~-~~---~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 380 VLDICLKLKENGLITR-DV---HDKTIRLTPPLCITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp HHHHHHHHHHTTEECC-EE---TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEe-cC---CCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 5678889988998743 22 34566 888888999999999999998764
No 339
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.34 E-value=9.2e-06 Score=90.96 Aligned_cols=93 Identities=9% Similarity=-0.043 Sum_probs=70.1
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecC-CCCcccHHHHHHHHHhhhhcCCcceEEEeecc-cCccccccCHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLG-TTSCCSFDNLAEIGPVA 221 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~G-tt~~GavDpl~~I~~i~ 221 (891)
.|+++.-+|.+....+...|.+++.++++ +++.+|+++|++.+++....+ ...+|+++.. +|.+|.+-|.+++.+++
T Consensus 128 ~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~ 206 (418)
T 3rq1_A 128 EVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGYSIEDKDWDSIL 206 (418)
T ss_dssp EEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred EEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 37777788988888888888899999984 567999999999998632111 1235555555 89999998877666554
Q ss_pred ---H------HcCCceeeeccccCC
Q psy852 222 ---K------EFDVWLHVDGAYAGS 237 (891)
Q Consensus 222 ---~------~~~~~lHvDaA~GG~ 237 (891)
+ ++|+++++|.+|.++
T Consensus 207 ~~~~~~~~~~~~~~~li~De~y~~~ 231 (418)
T 3rq1_A 207 NFLKDLVAIGRNNVIIGIDVAYLDY 231 (418)
T ss_dssp HHHHHHHHTSSCEEEEEEECTTGGG
T ss_pred HHHHHhhhccCCCeEEEEecccccc
Confidence 4 889999999998553
No 340
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=98.34 E-value=1.6e-05 Score=87.28 Aligned_cols=238 Identities=11% Similarity=-0.024 Sum_probs=147.1
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+... . ...-.|++..-+|.+...++...|.+++.+|.++++.++
T Consensus 84 ~i~--~t~g~~~al~~~~~~~~~----~-------------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 144 (376)
T 3ezs_A 84 ELI--STLGSREVLFNFPSFVLF----D-------------YQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFT 144 (376)
T ss_dssp GEE--EESSSHHHHHHHHHHHTT----T-------------CSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSC
T ss_pred HEE--ECcCcHHHHHHHHHHHcC----C-------------CCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcc
Confidence 566 789999999988766421 0 002257788888999999988899999999998776677
Q ss_pred HHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hcC------------------------C
Q psy852 543 GATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQG------------------------I 579 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ldG------------------------i 579 (891)
+ +|++++.++.+ .++++ +..|++. |.++ +|. .
T Consensus 145 ~-~l~~~~~~~~~----~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (376)
T 3ezs_A 145 P-SLNEKELQEVD----LVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEA 219 (376)
T ss_dssp C-CCCHHHHHHCS----EEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTT
T ss_pred h-hHHhhhccCCC----EEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccc
Confidence 7 77787765321 22222 2245543 3331 111 1
Q ss_pred CCccEEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH-Hh
Q psy852 580 EYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG-LS 657 (891)
Q Consensus 580 ~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG-~~ 657 (891)
...+-+..+.||+++ ....+|+++...+ +.+.+.....+ ..++ ...+.+++....+. .+
T Consensus 220 ~~~~i~~~s~sK~~g~~G~r~G~~~~~~~--~~~~~~~~~~~-----------~~~~------~~~~~~~a~~~~l~~~~ 280 (376)
T 3ezs_A 220 FKNVLVIHSLSKRSSAPGLRSGFIAGDSR--LLEKYKAFRAY-----------LGYT------SANAIQKASEAAWLDDR 280 (376)
T ss_dssp CTTEEEEEESTTTTTCGGGCCEEEEECHH--HHHHHHHHHTT-----------TCCC------CCHHHHHHHHHHHHCSH
T ss_pred cCcEEEEecchhccCCccceeEEEeeCHH--HHHHHHHHHhh-----------hcCC------CChHHHHHHHHHHhCcH
Confidence 234567789999996 4567888876432 22222110000 0011 11233333333333 23
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHh-CCcEEEeecccc----C
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINA-SGRLHMVPASQE----Q 732 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~-~G~~~~s~s~~~----g 732 (891)
.+++..++..++.+++.+.|+ ++. .+.....++++++ ...++.+.|.+ .|+.+..+.... +
T Consensus 281 ~~~~~~~~~~~~~~~l~~~l~---~~~--~~~~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 346 (376)
T 3ezs_A 281 HAEFFRNIYANNLKLARKIFK---NTL--IYPYSFYVYLPVQ---------NGENFAKTLYQNEGIITLPALYLGRNRIG 346 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHST---TCC--CCSBSSEEEEECS---------CHHHHHHHHHHHHCCBCEEGGGGCSTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhc---CCC--CCCcceEEEEECC---------CHHHHHHHHHHhCCEEEeCcHHhCCCCCC
Confidence 367777778888899999887 443 3334456677764 24577888877 798865544332 4
Q ss_pred CeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 733 NDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 733 ~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
...+ ++++. ++++|+++++.|++++
T Consensus 347 ~~~iRis~~~--~~~~i~~~l~~l~~~l 372 (376)
T 3ezs_A 347 ADYVRLALVY--DTPLLEKPLEIIETYR 372 (376)
T ss_dssp TTEEEEECCS--CHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcC--CHHHHHHHHHHHHHHH
Confidence 4566 88763 8999999999998775
No 341
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=98.34 E-value=1.3e-05 Score=90.44 Aligned_cols=83 Identities=11% Similarity=-0.001 Sum_probs=59.7
Q ss_pred EEEecCCCChHHHHHHHHcCC------------eEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcccc-
Q psy852 144 MAYCSKEAHSCVEKAAMMAFV------------RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCS- 210 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~------------~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Ga- 210 (891)
+|+.+..-|.+...++.+.+. .+..++.+ |+++|++.+++. +.+|+++..++..|.
T Consensus 149 vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~le~~i~~~------~~~vi~~p~~~~gG~~ 217 (420)
T 2pb2_A 149 IIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN-----DLHAVKAVMDDH------TCAVVVEPIQGEGGVQ 217 (420)
T ss_dssp EEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT-----CHHHHHHHCCTT------EEEEEECSEETTTTSE
T ss_pred EEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCC-----CHHHHHHHhccC------ceEEEEeCCcCCCCee
Confidence 455556667776666554332 26666643 899999988643 446666666666665
Q ss_pred ---ccCHHHHHHHHHHcCCceeeeccccCC
Q psy852 211 ---FDNLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 211 ---vDpl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
.+++++|+++|+++|++|++|.++.|+
T Consensus 218 ~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~ 247 (420)
T 2pb2_A 218 AATPEFLKGLRDLCDEHQALLVFDEVQCGM 247 (420)
T ss_dssp ECCHHHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEEcCCcCc
Confidence 488999999999999999999999664
No 342
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=98.33 E-value=6.3e-06 Score=92.18 Aligned_cols=231 Identities=10% Similarity=0.029 Sum_probs=134.8
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHH----HHHcCceEEEecCCCCCCcCH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKA----AMMAFVRLKILEPDDKNSLRG 543 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Ka----a~l~gv~v~~Vp~d~~G~mD~ 543 (891)
++++|++++..++.+.. .+.-.|+++...|.+.... +...|++++.+|. .|+
T Consensus 79 ~~~sG~~ai~~~~~~~~-------------------~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-----~d~ 134 (389)
T 3acz_A 79 AFGSGMGAISSSTLAFL-------------------QKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDT-----SDV 134 (389)
T ss_dssp EESSHHHHHHHHHTTTC-------------------CTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECT-----TCH
T ss_pred EeCCHHHHHHHHHHHHh-------------------CCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC-----CCH
Confidence 35567899887765531 0122578888889887666 3557889999987 389
Q ss_pred HHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcC-----C------CCccEEEEcCcccCCcc
Q psy852 544 ATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQG-----I------EYADSFNVNVNKWLLTA 596 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldG-----i------~~aDSIs~d~HK~L~~P 596 (891)
++|+++|+++++ .+++.. ..|... |+++ +|. . ..+|.+..++||++++|
T Consensus 135 ~~l~~~i~~~~~----~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~ 210 (389)
T 3acz_A 135 EKVKAAWKPNTK----MVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGH 210 (389)
T ss_dssp HHHHHTCCTTEE----EEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCS
T ss_pred HHHHHhcCCCCe----EEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCC
Confidence 999998875321 222221 233333 4331 221 1 24799999999999999
Q ss_pred cc--cEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy852 597 FD--SSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFE 674 (891)
Q Consensus 597 ~g--~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~ 674 (891)
.+ +|+++.++.+.+. .+.....+ ++. ....+..|..++.+ +.+...+++..++++++.
T Consensus 211 ~~~~~G~v~~~~~~~~~-~l~~~~~~-------------~g~----~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~ 270 (389)
T 3acz_A 211 GDVIGGVSSAKTAEDIA-TIKFYRKD-------------AGS----LMAPMDAFLCARGM--KTLPIRMQIHMENGLKVA 270 (389)
T ss_dssp SCCCCEEEEESSHHHHH-HHHHHHHH-------------HCC----CCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHH
T ss_pred CCceeEEEEECcHHHHH-HHHHHHHh-------------cCC----CCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHH
Confidence 88 6888887623222 11100000 000 01234456555543 456666777778888888
Q ss_pred HHhccCCCcEEeC-----------------CCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe---e------c
Q psy852 675 GKVRRDPRFEISN-----------------DVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV---P------A 728 (891)
Q Consensus 675 ~~L~~~~~~eil~-----------------~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s---~------s 728 (891)
+.|++.+.++-+. +...++++|.+.+ .+.+...|.+.|++... + +
T Consensus 271 ~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~---------~~~~~~~l~~~~i~~~~~s~G~~~sl~~ 341 (389)
T 3acz_A 271 KFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS---------FEAAKKLMEHLKVCTLAVSLGCVDTLIE 341 (389)
T ss_dssp HHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---------HHHHHHHHTTCSSSEEBSCCCCSSCEEE
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC---------HHHHHHHHHhCCCcEECcCCCCcccEee
Confidence 8887765443211 0125789999853 23444555566765433 1 1
Q ss_pred cc---------------cC--CeEE-EEecCCCCHHHHHHHHHHH
Q psy852 729 SQ---------------EQ--NDEV-FELQERKRKDDLAYKRSFF 755 (891)
Q Consensus 729 ~~---------------~g--~~~l-~sv~~~tT~edId~li~~L 755 (891)
.+ .+ ...+ +|++...++++|+.+.++|
T Consensus 342 ~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al 386 (389)
T 3acz_A 342 HPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQAL 386 (389)
T ss_dssp CTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHH
Confidence 00 11 3567 9998876666666665554
No 343
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=98.32 E-value=9.2e-05 Score=83.29 Aligned_cols=163 Identities=9% Similarity=-0.123 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCC-CCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 30 YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLP-EKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~-~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
.|.++..+...+-..........+. ....+..+.+++++|.+ .+.. .+
T Consensus 61 ~p~v~~a~~~~~~~~~~~~~~~~~~--~~~~~l~~~la~~~~~~~~~~v-----------------------------~~ 109 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKLAHAAANDFYN--IPQLELAKKLVTYSPGNFQKKV-----------------------------FF 109 (419)
T ss_dssp CHHHHHHHHHHHTTSCCCSCSCSCC--HHHHHHHHHHHHHSSCSSCEEE-----------------------------EE
T ss_pred CHHHHHHHHHHHhhCccccccccCC--HHHHHHHHHHHHhCCCCcCCEE-----------------------------EE
Confidence 5777776666543221111111221 22334457788888875 2211 14
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcC-------------CeEEEEecCCCC
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF-------------VRLKILEPDDKN 175 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~-------------~~v~~V~~d~~g 175 (891)
++||+...+ .++.+++... ++-+|+....-|.+...++.+.+ ..++.|+.+++.
T Consensus 110 ~~gg~ea~~-~ai~~~~~~~------------~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 176 (419)
T 2eo5_A 110 SNSGTEAIE-ASIKVVKNTG------------RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPY 176 (419)
T ss_dssp ESSHHHHHH-HHHHHHHTTS------------CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSS
T ss_pred eCchHHHHH-HHHHHHHHhh------------CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccc
Confidence 578876543 3343444321 12245555566766655553321 267888886653
Q ss_pred c----------------ccHHHHH-HHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccc
Q psy852 176 S----------------LRGATLR-QVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAY 234 (891)
Q Consensus 176 ~----------------id~~~L~-~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~ 234 (891)
+ +|+++|+ +.+++.. ....+.+|+++-.++.+|.+-| +++|+++|+++|++||+|.+|
T Consensus 177 ~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~ 255 (419)
T 2eo5_A 177 RNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQ 255 (419)
T ss_dssp SCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTT
T ss_pred cccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 3 5789999 8887421 0012456777766777898777 999999999999999999999
Q ss_pred cCC
Q psy852 235 AGS 237 (891)
Q Consensus 235 GG~ 237 (891)
.|+
T Consensus 256 ~~~ 258 (419)
T 2eo5_A 256 MGL 258 (419)
T ss_dssp TTT
T ss_pred cCC
Confidence 664
No 344
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=98.32 E-value=3.3e-05 Score=87.02 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=72.5
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhh------hcCCcceEE-EeecccCccccccCHH-
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDE------TMGYIPFFV-STTLGTTSCCSFDNLA- 215 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~------~~g~~p~~V-~~t~Gtt~~GavDpl~- 215 (891)
.|++..-+|.+....+...|.+++.|+++++| +|+++|++.+++.. ..+..+.+| +....+|.||.+-|.+
T Consensus 134 ~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~ 212 (425)
T 2r2n_A 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSER 212 (425)
T ss_dssp EEEEESSCCHHHHHHHGGGTCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHH
T ss_pred EEEEeCCCcHHHHHHHHHcCCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHH
Confidence 37777888999888887778899999998765 99999999987321 001123455 4467889999998866
Q ss_pred --HHHHHHHHcCCceeeeccccCC
Q psy852 216 --EIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 216 --~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+|+++|+++|++|++|.+|+++
T Consensus 213 l~~l~~~a~~~~~~li~De~~~~~ 236 (425)
T 2r2n_A 213 KKEIYELARKYDFLIIEDDPYYFL 236 (425)
T ss_dssp HHHHHHHHHHTTCEEEEECTTGGG
T ss_pred HHHHHHHHHHcCCEEEEECCcccc
Confidence 9999999999999999999653
No 345
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=98.32 E-value=2.6e-06 Score=95.66 Aligned_cols=236 Identities=11% Similarity=0.062 Sum_probs=136.9
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH----HHcCceEEEecCCCCCCcCHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGA 544 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa----~l~gv~v~~Vp~d~~G~mD~~ 544 (891)
.++|++++..++. . .+ +.-.|+++...|.+..... ...|++++.+|.+ | +
T Consensus 76 ~~sGt~a~~~al~-~----~~---------------~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d-~ 129 (393)
T 1n8p_A 76 FSSGSATTATILQ-S----LP---------------QGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL-----L-N 129 (393)
T ss_dssp ESCHHHHHHHHHH-T----SC---------------SSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH-----H-H
T ss_pred ECChHHHHHHHHH-H----cC---------------CCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC-----h-H
Confidence 4455899887765 2 10 1124677777887665543 3457788888875 6 7
Q ss_pred HHHHHHHhhhhcCCccEEE---EecCCccc--------hhhh---------hcCC-----------CCccEEEEcCcccC
Q psy852 545 TLRQVMQQDETMGYIPFFV---STTLGTTS--------CYRK---------SQGI-----------EYADSFNVNVNKWL 593 (891)
Q Consensus 545 ~Le~aI~~d~~~g~ip~~V---vataGTT~--------c~~~---------ldGi-----------~~aDSIs~d~HK~L 593 (891)
+|+++|++.+ ..+++ ++..|+.. |+++ +|++ -.+|.+..++||++
T Consensus 130 ~l~~~i~~~t----~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~ 205 (393)
T 1n8p_A 130 DLPQLIKENT----KLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYI 205 (393)
T ss_dssp HHHHHSCSSE----EEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTT
T ss_pred HHHHhcccCc----eEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccc
Confidence 8888876421 11222 12345543 4333 1221 14799999999988
Q ss_pred Cccc-cc-EEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHH
Q psy852 594 LTAF-DS-SCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAK 671 (891)
Q Consensus 594 ~~P~-g~-G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~ 671 (891)
+.|- .. |+++.++++.+......... + +-....+..|..++ +.+.+...+++..++++
T Consensus 206 g~~G~rigG~~~~~~~~~~~~l~~~~~~--------------~----g~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~ 265 (393)
T 1n8p_A 206 NGHSDVVLGVLATNNKPLYERLQFLQNA--------------I----GAIPSPFDAWLTHR--GLKTLHLRVRQAALSAN 265 (393)
T ss_dssp TCSSCCCCEEEEESCHHHHHHHHHHHHH--------------H----CCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHH
T ss_pred cCCCCceeEEEEeCCHHHHHHHHHHHHh--------------c----CCCCCHHHHHHHHh--ccchHHHHHHHHHHHHH
Confidence 8543 15 77777654433221111000 0 00112334454433 34556777788888889
Q ss_pred HHHHHhccCCC-cEEe-CC-----C------------c-eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec---
Q psy852 672 LFEGKVRRDPR-FEIS-ND-----V------------R-LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA--- 728 (891)
Q Consensus 672 ~L~~~L~~~~~-~eil-~~-----~------------~-~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s--- 728 (891)
++.+.|++.+. +.-+ .+ + . .++++|.+.+. ....+.+++.|...++....++
T Consensus 266 ~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-----~~~~~~~l~~l~~~~~~~s~G~~~s 340 (393)
T 1n8p_A 266 KIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG-----AEAASKFASSTRLFTLAESLGGIES 340 (393)
T ss_dssp HHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC-----HHHHHHHHHHCSSSEECSCCCCSSC
T ss_pred HHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc-----HHHHHHHHhhCCcceECCCCCCCcc
Confidence 99999988765 5422 11 1 2 57999999643 2345566666654333221110
Q ss_pred --------cc----------cC--CeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 729 --------SQ----------EQ--NDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 729 --------~~----------~g--~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.. .+ ...+ +|++..+++++|+.+.++|+++.
T Consensus 341 ~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 341 LLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp EEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred eeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 10 11 3567 99999999999999999998753
No 346
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.32 E-value=2.2e-05 Score=87.03 Aligned_cols=87 Identities=16% Similarity=0.204 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHhccC--CCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-
Q psy852 660 QKYIRRHCELAKLFEGKVRRD--PRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV- 736 (891)
Q Consensus 660 ~~~i~~~~~lA~~L~~~L~~~--~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l- 736 (891)
++..++..++++++.+.|++. +.+... ++..+++.|.+.+ ...++.+.|.+.|+.+..+ +...+
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~--------~~~~l~~~l~~~gi~v~~~----~~~~iR 368 (392)
T 3ruy_A 302 EKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGIELNE--------PARPYCEQLKAAGLLCKET----HENVIR 368 (392)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEEEESS--------CSHHHHHHHHTTTEECCCB----TTTEEE
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEEEEcc--------hHHHHHHHHHHCCcEEecC----CCCEEE
Confidence 566777888999999999886 233332 2345677777643 3457888888899773322 24566
Q ss_pred EEecCCCCHHHHHHHHHHHHHHH
Q psy852 737 FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 737 ~sv~~~tT~edId~li~~L~ei~ 759 (891)
++++..+|++|++++++.|++++
T Consensus 369 i~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 369 IAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHh
Confidence 98888899999999999998764
No 347
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.32 E-value=1.8e-05 Score=87.56 Aligned_cols=246 Identities=9% Similarity=-0.026 Sum_probs=147.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCC-Cc
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKN-SL 541 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G-~m 541 (891)
+|+ +++|+++++..++.+.... |....+..|+++.-.|.+...++...|.+++.+|.+++| .+
T Consensus 93 ~i~--~t~g~~~al~~~~~~~~~~--------------g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~ 156 (396)
T 3jtx_A 93 EIL--PVLGSREALFSFVQTVLNP--------------VSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNP 156 (396)
T ss_dssp SEE--EESSHHHHHHHHHHHHCCC-----------------CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCC
T ss_pred eEE--EcCCcHHHHHHHHHHHhCC--------------CCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCcc
Confidence 455 6889999998887765220 000012357788888999988888899999999996655 68
Q ss_pred CHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C---------------
Q psy852 542 RGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G--------------- 578 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G--------------- 578 (891)
|+++|++++.+.+ ..++++. ..|++. |.++ +| |
T Consensus 157 d~~~l~~~~~~~~----~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 232 (396)
T 3jtx_A 157 DWRSISEEVWKRT----KLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGR 232 (396)
T ss_dssp CGGGSCHHHHHTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTC
T ss_pred CHHHHHHhhccCc----EEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhccc
Confidence 9999999998632 2233322 245543 3331 11 1
Q ss_pred CCCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH-H
Q psy852 579 IEYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG-L 656 (891)
Q Consensus 579 i~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG-~ 656 (891)
-...+-+..+.+|.++.| ..+|+++.. ++.+ +.+.....+ ..++ ...+.+++....+. .
T Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~-~~~~~~~~~-----------~~~~------~~~~~~~a~~~~l~~~ 293 (396)
T 3jtx_A 233 SRQKLLMFTSLSKRSNVPGLRSGFVAGD-AELL-KNFLLYRTY-----------HGSA------MSIPVQRASIAAWDDE 293 (396)
T ss_dssp CCTTEEEEEESTTTSSCGGGCCEEEEEC-HHHH-HHHHHHHHH-----------HTCC------CCHHHHHHHHHHHHCC
T ss_pred ccCcEEEEeccccccCCcccceEEEEeC-HHHH-HHHHHHHhh-----------cccC------CCHHHHHHHHHHhCCH
Confidence 023456778899965444 678887653 3222 222110000 0001 11233333333332 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeeccc-----
Q psy852 657 SGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQ----- 730 (891)
Q Consensus 657 ~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~----- 730 (891)
+.+.+..++..++.+++.+.|++. +.+..+.....+++++... ....+.+.|. +.|+.+..+...
T Consensus 294 ~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 364 (396)
T 3jtx_A 294 QHVIDNRRLYQEKFERVIPILQQV--FDVKLPDASFYIWLKVPDG-------DDLAFARNLWQKAAIQVLPGRFLARDTE 364 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT--SCCCCCSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--CCccCCCeeEEEEEECCCC-------CHHHHHHHHHHHCCEEEeCChHhCCccc
Confidence 446667777788888999999875 3343333445677777532 3457777774 469876554432
Q ss_pred ---cCCeEE-EEecCCCCHHHHHHHHHHHHHH
Q psy852 731 ---EQNDEV-FELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 731 ---~g~~~l-~sv~~~tT~edId~li~~L~ei 758 (891)
.+...+ ++++. ++++|+++++.|+++
T Consensus 365 ~~~~~~~~iRis~~~--~~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 365 QGNPGEGYVRIALVA--DVATCVKAAEDIVSL 394 (396)
T ss_dssp TCCTTTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred ccCCCCCeEEEEEcC--CHHHHHHHHHHHHHH
Confidence 234566 88765 899999999998865
No 348
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=98.31 E-value=1.3e-05 Score=91.21 Aligned_cols=273 Identities=13% Similarity=0.073 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHhcCCC-----CCcc-ccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCcccccccc-CCC
Q psy852 30 YPSVLADMLSDAIGCI-----GFSW-AASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDY-MTP 102 (891)
Q Consensus 30 ~~~~~~~~l~~~~n~~-----~~~~-~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~-~t~ 102 (891)
-|.++..+-+.+.|-. +--| ..+-...++|..+++...+|||.+... |+. +-|
T Consensus 67 S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~--------------------w~VNVQP 126 (490)
T 3ou5_A 67 SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQ--------------------WGVNVQP 126 (490)
T ss_dssp CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTT--------------------EEEECCC
T ss_pred CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccc--------------------cCCCCCc
Confidence 3555555555555543 2222 345678899999999999999998652 111 111
Q ss_pred CCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEe---cCCCChHHH-----HHHHHcC--CeEEEEecC
Q psy852 103 ANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYC---SKEAHSCVE-----KAAMMAF--VRLKILEPD 172 (891)
Q Consensus 103 ~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~---S~~~H~Sv~-----kaa~~~~--~~v~~V~~d 172 (891)
.+|+.+|.+....+ -+.+. .|+. +.-.|.|-- +.....+ .+...-++|
T Consensus 127 -------~SGs~AN~avy~Al--l~PGD-------------~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd 184 (490)
T 3ou5_A 127 -------YSGSPANLAVYTAL--LQPHD-------------RIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 184 (490)
T ss_dssp -------SSHHHHHHHHHHHH--CC-CC-------------CEECBC----------------------------CBCEE
T ss_pred -------CCHHHHHHHHHHHH--cCCCC-------------EEEecccCCCCcccccccCCCcccccccccccccccccC
Confidence 35654332222222 21110 1111 122233321 1111112 244445667
Q ss_pred -CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHcCCceeeeccccCCccccCCCCccCCCC
Q psy852 173 -DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGK 251 (891)
Q Consensus 173 -~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~~~~lHvDaA~GG~~~~~~~~~~~~~g~ 251 (891)
++|.||.+++++...+.+ |-+|++ |.+..--.-|++++.+||++.|.++++|.|+ +.|+
T Consensus 185 ~~t~~IDyd~~~~~A~~~k-----PklIi~--G~SaY~r~id~~~~reIAd~vGA~Lm~DmAH-------------iaGL 244 (490)
T 3ou5_A 185 PKTGLIDYNQLALTARLFR-----PRLIIA--GTSAYARLIDYARMREVCDEVKAHLLADMAH-------------ISGL 244 (490)
T ss_dssp TTTTEECHHHHHHHHHHHC-----CSEEEE--CCSSCCSCCCHHHHHHHHHHHTCEEEEECGG-------------GHHH
T ss_pred CCCCcccHHHHHHHHhhcC-----CCeEEE--CCccCccccCHHHHHHHHhhcccEEEechhh-------------hhhh
Confidence 569999999999888764 666654 5566677789999999999999999999998 0110
Q ss_pred cccccCCCCcccccCCCCcchhHHHHhhhhHHHHHhhhcccCCccchhhHHHHhhhhhcccccccccccccccccccccc
Q psy852 252 TSFDNLHLSPIWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVETRGHIQSYRDAIF 331 (891)
Q Consensus 252 ~~~d~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (891)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T 3ou5_A 245 -------------------------------------------------------------------------------- 244 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEeeccccCccccCccccccccCCCcccEEEEeCCCcCCccCCceEEEEeccccchhhcccCccccCCCCCCccccc
Q psy852 332 DVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYR 411 (891)
Q Consensus 332 ~~~~~~d~~~~~~~~~~~~~~~~~~gi~~~ds~~~~~HK~~~~p~~~g~~~~r~~~~~~~~~~~~~~y~~~~~~~~~~~~ 411 (891)
-+++.+-+| +++||.+|.+.||.+-+|-+ |++++|+...-.. .....-+.......+|..
T Consensus 245 ---------VA~g~~psP--------~~~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~~~--~k~~~~~~~~~~kkin~a 304 (490)
T 3ou5_A 245 ---------VAAKVIPSP--------FKHADIVTTTTHKTLRGARS-GLIFYRKGVKAVD--PKTGREIPYTFEDRINFA 304 (490)
T ss_dssp ---------HHTTSSCCG--------GGTCSEEEEESSSTTCSCSC-EEEEEECSEEEEC--C--CCEEECCCHHHHHHH
T ss_pred ---------hcccccCCc--------cccceEEeccccccccCCCc-eEEEecccccccc--ccccchhHHHHHHHHHhh
Confidence 011222222 24689999999999999987 8999887532100 000000000000111111
Q ss_pred -ccccCCCCChhH-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhhccCCccccc
Q psy852 412 -HWGIPLSRRFRS-LKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEIS 465 (891)
Q Consensus 412 -~~~~~~sr~~~~-l~~w~~l~~~g~~G~~~ii~~~lelAr~l~~~L~~~~~~eVv 465 (891)
-.+++++-.... .+.-.+++.--...+.+..++.+++|+.|++.|.+ .||.|+
T Consensus 305 VFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~-~G~~vv 359 (490)
T 3ou5_A 305 VFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE-RGYSLV 359 (490)
T ss_dssp HTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEG
T ss_pred cCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh-CCCeee
Confidence 123444444433 23334455545566788999999999999999977 588887
No 349
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=98.30 E-value=2.2e-05 Score=87.24 Aligned_cols=62 Identities=10% Similarity=0.070 Sum_probs=50.4
Q ss_pred eEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 165 RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 165 ~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
++..++.+ |+++|++++++. +.+|++...++.+|.+.| +++|+++|++||++||+|.++.|+
T Consensus 160 ~~~~~~~~-----d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~ 225 (395)
T 3nx3_A 160 GVKFAKYN-----DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGM 225 (395)
T ss_dssp CEEEECTT-----CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CcEEeCCC-----CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 55666643 699999888643 357777778888899988 999999999999999999999764
No 350
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.29 E-value=5.6e-06 Score=93.21 Aligned_cols=88 Identities=7% Similarity=-0.065 Sum_probs=72.5
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEee-cccCccccccCHH---HHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT-LGTTSCCSFDNLA---EIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t-~Gtt~~GavDpl~---~I~~ 219 (891)
.|++..-+|.+....+...|.+++.||+|++| +|+++|+++++... +.+|+++ ..+|.||.+-|.+ +|++
T Consensus 135 ~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~-----~~~v~~~p~~~NPtG~~~~~~~~~~l~~ 208 (427)
T 3ppl_A 135 KWICPVPGYDRHFSITERFGFEMISVPMNEDG-PDMDAVEELVKNPQ-----VKGMWVVPVFSNPTGFTVTEDVAKRLSA 208 (427)
T ss_dssp EEEEEESCCHHHHHHHHHTTCEEEEEEEETTE-ECHHHHHHHTTSTT-----EEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEcCCCcHHHHHHHHHcCCEEEEeCCCCCC-CCHHHHHHHHhcCC-----CeEEEECCCCCCCCCccCCHHHHHHHHH
Confidence 47777888999988888888899999999887 99999999884221 3355544 7899999998888 8888
Q ss_pred HH-HHcCCceeeeccccCC
Q psy852 220 VA-KEFDVWLHVDGAYAGS 237 (891)
Q Consensus 220 i~-~~~~~~lHvDaA~GG~ 237 (891)
+| +++|++|++|.+|+++
T Consensus 209 ~a~~~~~~~ii~De~y~~~ 227 (427)
T 3ppl_A 209 METAAPDFRVVWDNAYAVH 227 (427)
T ss_dssp CCCSSTTCEEEEECTTTTC
T ss_pred HHhhcCCCEEEEECCCccc
Confidence 88 8999999999999653
No 351
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=98.29 E-value=3.5e-05 Score=85.50 Aligned_cols=258 Identities=13% Similarity=0.079 Sum_probs=139.8
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++++++.+. +. +++ +++||+|+|..++.+++...... | ..++-+|+....-|-+...+..+
T Consensus 81 ~~l~~~la~~~~--~~-~v~--~~~gg~ea~~~al~~~~~~~~~~----------g-~~~~~vi~~~~~yhg~~~~~~~~ 144 (395)
T 3nx3_A 81 AAAAKNLAKASA--LE-RVF--FTNSGTESIEGAMKTARKYAFNK----------G-VKGGQFIAFKHSFHGRTLGALSL 144 (395)
T ss_dssp HHHHHHHHHHHT--CS-EEE--EESSHHHHHHHHHHHHHHHHHHT----------T-CTTCEEEEETTCCCCSSHHHHTT
T ss_pred HHHHHHHHHhcC--CC-eEE--EeCCHHHHHHHHHHHHHHHhhcc----------C-CCCCEEEEEcCCcCCCCHHHHhh
Confidence 345555555554 22 455 78899999999999888654322 1 11233555555555444333322
Q ss_pred c------------CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEE---EecCCccc------------hhhh---
Q psy852 526 A------------FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFV---STTLGTTS------------CYRK--- 575 (891)
Q Consensus 526 ~------------gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~V---vataGTT~------------c~~~--- 575 (891)
. +.++..+|.+ |+++|+++|+++++ -+++ .++.|+.. |.++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~----~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 215 (395)
T 3nx3_A 145 TANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVNEKTC----AIILESVQGEGGINPANKDFYKALRKLCDEKDIL 215 (395)
T ss_dssp CCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCTTEE----EEEEESEECTTSCEECCHHHHHHHHHHHHHHTCE
T ss_pred cCCcccccccCCCCCCcEEeCCC-----CHHHHHHhccCCeE----EEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence 2 2345555543 68888888764321 1222 22334432 3331
Q ss_pred --hcC----C-------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcc
Q psy852 576 --SQG----I-------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGI 636 (891)
Q Consensus 576 --ldG----i-------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti 636 (891)
+|. + -..|.++++ |.++.++++|+++.+++.. .+.+.. . . . ..+.
T Consensus 216 li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~s--K~~~~G~~~G~~~~~~~~~-~~~~~~--~-~-~---------~~~~ 279 (395)
T 3nx3_A 216 LIADEIQCGMGRSGKFFAYEHAQILPDIMTSA--KALGCGLSVGAFVINQKVA-SNSLEA--G-D-H---------GSTY 279 (395)
T ss_dssp EEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGTTTSCCEEEEECHHHH-HHHSCT--T-C-C---------SSCB
T ss_pred EEEEecccCCCcCCcchhHHhcCCCCCEEEec--ccccCCCceEEEEEchhhh-hhhcCC--c-c-c---------CCCC
Confidence 111 0 124777775 8887778899998876520 222210 0 0 0 0011
Q ss_pred cccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc----CCCcEEeCCCceeEEEEEecCCcchhhhhhHHH
Q psy852 637 PLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR----DPRFEISNDVRLGLVCFRLRSENNLIADQNNRK 712 (891)
Q Consensus 637 ~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~----~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~ 712 (891)
. ...+.+.+.+..+....-++.+++..++.+++.+.|++ .+.+... +...+++.|.+.+. .....
T Consensus 280 ~----~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~------~~~~~ 348 (395)
T 3nx3_A 280 G----GNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDKS------VKVAK 348 (395)
T ss_dssp S----CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTT------SCHHH
T ss_pred C----CCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCCc------chHHH
Confidence 1 12233333333332111123344455555555555543 4444332 22346777887542 24567
Q ss_pred HHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 713 LLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 713 L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.+.|.++|+++..+ +...+ ++++..+|++|++++++.|++++
T Consensus 349 ~~~~l~~~Gi~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 392 (395)
T 3nx3_A 349 VIQKCQENALLLISC----GENDLRFLPPLILQKEHIDEMSEKLRKAL 392 (395)
T ss_dssp HHHHHHHTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 888899999875433 24566 98888999999999999999876
No 352
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.29 E-value=8.7e-06 Score=90.18 Aligned_cols=91 Identities=9% Similarity=0.009 Sum_probs=74.0
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEecC--CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEPD--DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGP 219 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~d--~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~ 219 (891)
|++..-+|++....+...+.+++.++.+ +++.+|+++|++.+++.. ..+.+++.+..+|.||.+-| +++|++
T Consensus 120 vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~~~nptG~~~~~~~l~~i~~ 196 (394)
T 2ay1_A 120 VFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAK---KGDMVLLHGCCHNPTGANLTLDQWAEIAS 196 (394)
T ss_dssp EEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCC---TTCEEEEESSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 6677788999888887677789999986 678899999999997531 12457777889999999976 557899
Q ss_pred HHHHcCCceeeeccccCCc
Q psy852 220 VAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 220 i~~~~~~~lHvDaA~GG~~ 238 (891)
+|+++|+++++|.+|+++.
T Consensus 197 ~~~~~~~~li~De~~~~~~ 215 (394)
T 2ay1_A 197 ILEKTGALPLIDLAYQGFG 215 (394)
T ss_dssp HHHHHTCEEEEEECCTTSS
T ss_pred HHHHCCCEEEEecCccccc
Confidence 9999999999999997654
No 353
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.29 E-value=2.6e-05 Score=87.77 Aligned_cols=278 Identities=12% Similarity=0.047 Sum_probs=135.6
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++++++.+...+. +|+ +++||+|+|..++.+++.....+.. ..+..+|+....-|....-+..+
T Consensus 75 ~~l~~~la~~~~~~~~-~v~--~~~gg~ea~~~al~~~~~~~~~~g~----------~~~~~vi~~~~~yhg~~~~~~~~ 141 (430)
T 3i4j_A 75 EEYAGRLARFVGLPTF-RFW--AVSGGSEATESAVKLARQYHVERGE----------PGRFKVITRVPSYHGASLGSLAA 141 (430)
T ss_dssp HHHHHHHHHHTTCTTC-EEE--EESSHHHHHHHHHHHHHHHHHHTTC----------TTCCEEEEETTC-----------
T ss_pred HHHHHHHHHhCCCCCC-EEE--EeCcHHHHHHHHHHHHHHHHHhcCC----------CCCcEEEEEeCCcCCCCcccccc
Confidence 4556666666643333 566 7889999999999998876543211 11234455555555544333333
Q ss_pred cCc--------------eEEEecCCCC---CCcCHHHHHHHHHhhhhcCCccEEEE-ecCC-ccc---------------
Q psy852 526 AFV--------------RLKILEPDDK---NSLRGATLRQVMQQDETMGYIPFFVS-TTLG-TTS--------------- 571 (891)
Q Consensus 526 ~gv--------------~v~~Vp~d~~---G~mD~~~Le~aI~~d~~~g~ip~~Vv-ataG-TT~--------------- 571 (891)
.+. ++..+|.+.. +..|+++|+++|++... ..+.++++ ...| .+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~-~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l 220 (430)
T 3i4j_A 142 SGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGP-ETVAAFMAEPVVGASDAALAPAPGYYERVRDI 220 (430)
T ss_dssp --------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCG-GGEEEEEECSSCCGGGTTCCCCTTHHHHHHHH
T ss_pred cCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCC-CCEEEEEEcCcccCcCCcccCCHHHHHHHHHH
Confidence 221 3344555443 55788999999975311 11222332 2234 222
Q ss_pred hhhh-----hc-------------------CCCCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCC-CccccCC
Q psy852 572 CYRK-----SQ-------------------GIEYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDP-LYLQHGH 625 (891)
Q Consensus 572 c~~~-----ld-------------------Gi~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~-~Yl~~~~ 625 (891)
|.++ +| ++ ..|.++++ |.++.- ..+|+++.+++ +.+.+.... .+..
T Consensus 221 ~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~s--K~l~~G~~r~G~~~~~~~--i~~~~~~~~~~~~~--- 292 (430)
T 3i4j_A 221 CDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVLG--KGLAAGYAPLAGLLAAPQ--VYETVMGGSGAFMH--- 292 (430)
T ss_dssp HHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEEC--GGGTTTSSCCEEEEECHH--HHHHHHHTTCBCCC---
T ss_pred HHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEEc--ccccCCccccEEEEECHH--HHHHHhccCCcccc---
Confidence 3331 11 11 14677765 988754 55788887443 222222111 0110
Q ss_pred CCCccccCCcccccccccchHHHH---HHHHHHHhhHHHHHHHHHHHHHHHHHHhc----cCCCcEEeCCCceeEEEEEe
Q psy852 626 EGAIDYRHWGIPLSRRFRSLKLWF---VIRTYGLSGLQKYIRRHCELAKLFEGKVR----RDPRFEISNDVRLGLVCFRL 698 (891)
Q Consensus 626 e~~~~~~~~ti~~SRr~~aL~lW~---~L~~lG~~G~~~~i~~~~~lA~~L~~~L~----~~~~~eil~~~~~~iV~Fr~ 698 (891)
..+. ....+.+.+ +|+.+..+.+ +++..++.+++.+.|+ ..+.+..+. +..+.+.|.+
T Consensus 293 -------~~t~----~~~~~~~aaa~aal~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~ 357 (430)
T 3i4j_A 293 -------GFTY----AGHPVSVAAGLSVLDIVEREDL---TGAAKERGAQLLAGLQALQARFPQMMQVR-GTGLLLGVVL 357 (430)
T ss_dssp -------CCTT----TTCHHHHHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHHHHCTTEEEEE-EETTEEEEEE
T ss_pred -------cCCC----CCCHHHHHHHHHHHHHHHcccH---HHHHHHHHHHHHHHHHHHHHhCCCeEEEE-EEEEEEEEEe
Confidence 0011 111233333 3333333333 3444444555554443 455554432 2345666776
Q ss_pred cCCcchhh---hhhHHHHHHHHHhCCcEEEeec-c--ccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 699 RSENNLIA---DQNNRKLLEDINASGRLHMVPA-S--QEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 699 ~~~~~~~~---d~ln~~L~~~L~~~G~~~~s~s-~--~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+...... +....++.+.|.++|+++..+. . ..+...+ ++++...|+++++++++.|+++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 426 (430)
T 3i4j_A 358 GDLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALE 426 (430)
T ss_dssp C------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 42210000 1234678889999998743221 1 1124456 888888899999999999998764
No 354
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=98.27 E-value=1.1e-05 Score=91.63 Aligned_cols=237 Identities=15% Similarity=0.094 Sum_probs=139.2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH----HcCceEEEecCCCCCCcCH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM----MAFVRLKILEPDDKNSLRG 543 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~----l~gv~v~~Vp~d~~G~mD~ 543 (891)
+++||++++..++.+. . .+.-.|+++...|.+....+. ..|++++.++.+ |+
T Consensus 102 ~~ssGt~Ai~~al~~l----~---------------~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~-----d~ 157 (415)
T 2fq6_A 102 LFPCGAAAVANSILAF----I---------------EQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL-----IG 157 (415)
T ss_dssp EESSHHHHHHHHHHTT----C---------------CTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT-----CG
T ss_pred EeCCHHHHHHHHHHHH----h---------------CCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC-----CH
Confidence 3468899988776542 0 012257788888888776652 357788888764 77
Q ss_pred HHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhh--h-----hcCC-----------CCccEEEEcCcccCC
Q psy852 544 ATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYR--K-----SQGI-----------EYADSFNVNVNKWLL 594 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~--~-----ldGi-----------~~aDSIs~d~HK~L~ 594 (891)
++|+++|+++++ .+++. +..|+.. |++ + +|+. -.+|.+..++||+++
T Consensus 158 ~~le~ai~~~tk----lV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg 233 (415)
T 2fq6_A 158 ADIVKHLQPNTK----IVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLV 233 (415)
T ss_dssp GGGGGGCCTTEE----EEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTT
T ss_pred HHHHHhhccCCc----EEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccC
Confidence 788877765321 12211 2234433 444 3 2221 247999999999999
Q ss_pred cccc--cEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q psy852 595 TAFD--SSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKL 672 (891)
Q Consensus 595 ~P~g--~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~ 672 (891)
.|-+ .|+++.++. .+. .+... .. ..+. ....+..|..++ +.+.+...+++..+++++
T Consensus 234 ~~g~~~~G~l~~~~~-~~~-~l~~~---~~----------~~G~----~~~~~~a~~~~~--~l~~l~~r~~~~~~n~~~ 292 (415)
T 2fq6_A 234 GHSDAMIGTAVCNAR-CWE-QLREN---AY----------LMGQ----MVDADTAYITSR--GLRTLGVRLRQHHESSLK 292 (415)
T ss_dssp CSSSCCCEEEEECTT-THH-HHHHH---HH----------HTTC----CCCHHHHHHHHH--HHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCHH-HHH-HHHHH---HH----------hcCC----CCCHHHHHHHHh--hhhHHHHHHHHHHHHHHH
Confidence 8765 677777654 222 22110 00 0000 011234455444 445667778888889999
Q ss_pred HHHHhccCCCcEEe-CC----------------CceeEEEEEecCC-cchhhhhhHHHHHHHHHhCCcEEEee-------
Q psy852 673 FEGKVRRDPRFEIS-ND----------------VRLGLVCFRLRSE-NNLIADQNNRKLLEDINASGRLHMVP------- 727 (891)
Q Consensus 673 L~~~L~~~~~~eil-~~----------------~~~~iV~Fr~~~~-~~~~~d~ln~~L~~~L~~~G~~~~s~------- 727 (891)
+.+.|++.+.++-+ -+ ...++++|.+++. . ......+++.|...++....+
T Consensus 293 l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~----~~~~~~~l~~l~~~~~a~s~G~~~s~~~ 368 (415)
T 2fq6_A 293 VAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLN----NEELANYLDNFSLFSMAYSWGGYESLIL 368 (415)
T ss_dssp HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCC----HHHHHHHHTTCSSCEECSCCCSSSCEEE
T ss_pred HHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCC----HHHHHHHHHhCCcCeEeccCCCCceeEE
Confidence 99999887765432 11 1357999999752 0 123455555554323221111
Q ss_pred -------ccc-----c--CCeEE-EEecCCCCHHHHHHHHHHHHH
Q psy852 728 -------ASQ-----E--QNDEV-FELQERKRKDDLAYKRSFFVR 757 (891)
Q Consensus 728 -------s~~-----~--g~~~l-~sv~~~tT~edId~li~~L~e 757 (891)
+.. . ....+ +|++..+++++|+.+.++|++
T Consensus 369 ~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 369 ANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp EECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred ecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 100 1 13567 999999999999999988874
No 355
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=98.27 E-value=2.5e-05 Score=88.86 Aligned_cols=85 Identities=9% Similarity=0.010 Sum_probs=61.5
Q ss_pred eEEEecCCCChHHHHHHHHcC------------CeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcccc
Q psy852 143 LMAYCSKEAHSCVEKAAMMAF------------VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCS 210 (891)
Q Consensus 143 ~~v~~S~~~H~Sv~kaa~~~~------------~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Ga 210 (891)
-+|+....-|.+...++.+.+ ..+..+|.+ |+++|++.++.. .+.+|+++-.++++|.
T Consensus 169 ~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~-----~~~~vi~ep~~~~~G~ 238 (439)
T 2oat_A 169 KIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQDP-----NVAAFMVEPIQGEAGV 238 (439)
T ss_dssp EEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTST-----TEEEEEECSSBTTTTS
T ss_pred eEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCCC-----CEEEEEEECCCCCCCC
Confidence 345555566777666654433 356677653 899999988521 2456666666677887
Q ss_pred cc----CHHHHHHHHHHcCCceeeeccccCC
Q psy852 211 FD----NLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 211 vD----pl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+- ++++|.++|++||+++++|.++.|+
T Consensus 239 ~~~~~~~l~~l~~l~~~~gillI~DEv~~g~ 269 (439)
T 2oat_A 239 VVPDPGYLMGVRELCTRHQVLFIADEIQTGL 269 (439)
T ss_dssp BCCCTTHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 76 8999999999999999999999663
No 356
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.26 E-value=2.8e-05 Score=86.99 Aligned_cols=246 Identities=7% Similarity=-0.026 Sum_probs=144.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC-CCCCc
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD-DKNSL 541 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d-~~G~m 541 (891)
+++ +++|+++++..++.+... +.-.|+++.-.|.+...++...|.+++.+|.+ +++.+
T Consensus 104 ~i~--~t~g~~~al~~~~~~l~~-------------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 162 (418)
T 3rq1_A 104 RSI--ATAGGTGGIHHLIHNYTE-------------------PGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNF 162 (418)
T ss_dssp EEE--EESHHHHHHHHHHHHHSC-------------------TTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSB
T ss_pred cEE--ECCchHHHHHHHHHHhcC-------------------CCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCc
Confidence 455 688999999888764311 12247778888888888888899999999984 56799
Q ss_pred CHHHHHHHHHhhhhcCCc-cEEEEec----CCccc-----------hh------hh-----hcCC---------------
Q psy852 542 RGATLRQVMQQDETMGYI-PFFVSTT----LGTTS-----------CY------RK-----SQGI--------------- 579 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~i-p~~Vvat----aGTT~-----------c~------~~-----ldGi--------------- 579 (891)
|+++|+++|++....+.. .++++.. .|++. |. ++ +|.+
T Consensus 163 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 242 (418)
T 3rq1_A 163 NHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFF 242 (418)
T ss_dssp CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGG
T ss_pred CHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHH
Confidence 999999999864222222 2333322 35543 44 31 1111
Q ss_pred ---CC--cc---EEEEcCcccCCcc-cccEEEEE--eCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHH
Q psy852 580 ---EY--AD---SFNVNVNKWLLTA-FDSSCLWV--ADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLW 648 (891)
Q Consensus 580 ---~~--aD---SIs~d~HK~L~~P-~g~G~llv--R~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW 648 (891)
.. -| -+..+.||.++.| ..+|+++. ++++... .+.....+... ..+. ....+.++
T Consensus 243 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~-----~~~~~~~~ 308 (418)
T 3rq1_A 243 NKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIAD-EFFEVNKSTSR--------ATWS-----NICRPAMR 308 (418)
T ss_dssp GGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHH-HHHHHHHHHHH--------HHTS-----SCCHHHHH
T ss_pred HHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHH-HHHHHHHHHHh--------hccC-----CCchHHHH
Confidence 00 12 3445899988755 56788876 2443222 22110000000 0000 01123333
Q ss_pred HHHHHHHH--------hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCcee-EEEEEecCCcchhhhhhHHHHHHHHHh
Q psy852 649 FVIRTYGL--------SGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLG-LVCFRLRSENNLIADQNNRKLLEDINA 719 (891)
Q Consensus 649 ~~L~~lG~--------~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-iV~Fr~~~~~~~~~d~ln~~L~~~L~~ 719 (891)
+....+.. +.+.++.++..++++++.+.|++. ++++..+ ..+ .+++... ...++.+.|.+
T Consensus 309 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~---------~~~~~~~~l~~ 377 (418)
T 3rq1_A 309 TMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPY-RGGFFITIPTD---------SANAICEELKK 377 (418)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCC-CSSSEEEEECT---------THHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCC-CceEEEEcCCC---------CHHHHHHHHHh
Confidence 34333322 123344556677788888888876 6766543 333 3333332 24567788888
Q ss_pred CCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 720 SGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 720 ~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.|+.+..+ ...+ +++. .+++++|+++++.|++++.
T Consensus 378 ~gi~v~~g-----~~~iRis~~-~~~~~~i~~~~~~l~~~l~ 413 (418)
T 3rq1_A 378 EHIYVIAL-----ANGIRIAAC-GIPKCQMTGLAEKIYNAMK 413 (418)
T ss_dssp TTEECEEC-----SSEEEEEGG-GSCHHHHTTHHHHHHHHHH
T ss_pred CCEEEecC-----CCCeEEEEe-cCCHHHHHHHHHHHHHHHH
Confidence 99875433 2346 8876 5699999999999998763
No 357
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=98.26 E-value=3.8e-05 Score=87.32 Aligned_cols=260 Identities=12% Similarity=0.118 Sum_probs=148.7
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCcccccccccc-ceEEEecccchHHHHHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLS-KLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~-~~vI~~S~~aH~Sv~Kaa~l 525 (891)
++++++++.+. .+ +++ +++||+|+|..++.++|.....+ .|...+ +-+|+....-|.+...++.+
T Consensus 122 ~l~~~la~~~g-~~--~v~--~~~sGseA~~~al~~~~~~~~~~---------~g~~~g~~~vi~~~~~yhg~~~~~~~~ 187 (439)
T 2oat_A 122 EYEEYITKLFN-YH--KVL--PMNTGVEAGETACKLARKWGYTV---------KGIQKYKAKIVFAAGNFWGRTLSAISS 187 (439)
T ss_dssp HHHHHHHHHHT-CS--EEE--EESSHHHHHHHHHHHHHHHHHHT---------TCCCTTCCEEEEETTCCCCSSHHHHTT
T ss_pred HHHHHHHHhcC-CC--EEE--EeCCHHHHHHHHHHHHHHHhhhc---------cCCCCCCCeEEEEcCCCCCCCHhHhhc
Confidence 44455555543 12 455 67899999999999988643211 111112 23555556677766666554
Q ss_pred cC------------ceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe----cCCccc------------hhhh--
Q psy852 526 AF------------VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST----TLGTTS------------CYRK-- 575 (891)
Q Consensus 526 ~g------------v~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva----taGTT~------------c~~~-- 575 (891)
.+ .++..+|.+ |+++|+++|+.+ .+-++++. +.|... |.++
T Consensus 188 ~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gi 258 (439)
T 2oat_A 188 STDPTSYDGFGPFMPGFDIIPYN-----DLPALERALQDP----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQV 258 (439)
T ss_dssp CCCHHHHTTSCSCCTTEEEECSS-----CHHHHHHHTTST----TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTC
T ss_pred CCChhcccCCCCCCCCeEEeCCC-----CHHHHHHHhCCC----CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 33 356677753 899999998521 12223322 234322 4331
Q ss_pred ---hc----CC-------------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCC
Q psy852 576 ---SQ----GI-------------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHW 634 (891)
Q Consensus 576 ---ld----Gi-------------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ 634 (891)
+| |+ -..|.++ .+|++++. +..|+++.+++ +.+.+.. . .+ ..
T Consensus 259 llI~DEv~~g~g~~g~~~~~~~~~~~~Di~t--~sK~l~~G~~~~G~v~~~~~--~~~~l~~---~-~~---------~~ 321 (439)
T 2oat_A 259 LFIADEIQTGLARTGRWLAVDYENVRPDIVL--LGKALSGGLYPVSAVLCDDD--IMLTIKP---G-EH---------GS 321 (439)
T ss_dssp EEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGGTTSSCCEEEEECHH--HHTTSCT---T-SS---------CC
T ss_pred EEEEeccccCCccCCcchhHHHhCCCCcEEE--ecccccCCCCCeEEEEECHH--HHhccCC---C-Cc---------cc
Confidence 11 11 0257664 46998875 56899998754 2222211 0 00 11
Q ss_pred cccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeC--CCceeEEEEEecCCcchhhhhhHHH
Q psy852 635 GIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN--DVRLGLVCFRLRSENNLIADQNNRK 712 (891)
Q Consensus 635 ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~--~~~~~iV~Fr~~~~~~~~~d~ln~~ 712 (891)
+.. .-++.......+++.+..+ +..++..+++++|.+.|++. ++.++. +...+++.+.+.+.. +....+
T Consensus 322 t~~-~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~----~~~~~~ 392 (439)
T 2oat_A 322 TYG-GNPLGCRVAIAALEVLEEE---NLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK----DWDAWK 392 (439)
T ss_dssp SST-TCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS----SCCHHH
T ss_pred CCC-cCHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc----cHHHHH
Confidence 111 1122233444555555443 45667788899999999876 233221 223457777775321 023567
Q ss_pred HHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 713 LLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 713 L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.+.|.++|+++. + .+...+ ++++..+|++||+++++.|++++
T Consensus 393 l~~~l~~~Gv~v~-~---~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 436 (439)
T 2oat_A 393 VCLRLRDNGLLAK-P---THGDIIRFAPPLVIKEDELRESIEIINKTI 436 (439)
T ss_dssp HHHHHHHTTEECC-B---SSSSEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCeEEe-c---CCCCEEEEECccCCCHHHHHHHHHHHHHHH
Confidence 8889988998732 2 234566 88888899999999999998875
No 358
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.26 E-value=1.2e-05 Score=87.45 Aligned_cols=78 Identities=13% Similarity=0.065 Sum_probs=65.6
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|++. -+|.+....+...|.+++.++.++++.+|+++| +. +.+|+++..+|.+|.+-|.+++.++++..
T Consensus 100 Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l-----~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 167 (335)
T 1uu1_A 100 VFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV-----GE------GDVVFIPNPNNPTGHVFEREEIERILKTG 167 (335)
T ss_dssp EECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC-----CT------TEEEEEESSCTTTCCCCCHHHHHHHHHTT
T ss_pred EEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc-----CC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 7777 889998888876778999999988888999887 11 34666677799999999999999999988
Q ss_pred CCceeeecccc
Q psy852 225 DVWLHVDGAYA 235 (891)
Q Consensus 225 ~~~lHvDaA~G 235 (891)
| ++++|.+|+
T Consensus 168 ~-~li~De~~~ 177 (335)
T 1uu1_A 168 A-FVALDEAYY 177 (335)
T ss_dssp C-EEEEECTTH
T ss_pred C-EEEEECcch
Confidence 8 899999994
No 359
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=98.26 E-value=2.8e-06 Score=94.31 Aligned_cols=281 Identities=12% Similarity=0.044 Sum_probs=184.4
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH--HHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S--v~Kaa~ 524 (891)
++.+.+++.+...+...++ +++|+++++..++.+.- . +.-.|+++..+|++ ...++.
T Consensus 50 ~~~~~la~~~~~~~~~~v~--~~~sgt~al~~~~~~~~----~---------------~gd~Vl~~~~~~~~~~~~~~~~ 108 (411)
T 3nnk_A 50 EVMALYRGVFRTENRWTML--VDGTSRAGIEAILVSAI----R---------------PGDKVLVPVFGRFGHLLCEIAR 108 (411)
T ss_dssp HHHHHHHHHHTCCCSEEEE--EESCHHHHHHHHHHHHC----C---------------TTCEEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEE--ECCCcHHHHHHHHHHhc----C---------------CCCEEEEecCCchHHHHHHHHH
Confidence 3344556666544432344 56788999988876651 0 12357888888987 777778
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCC---------
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGI--------- 579 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi--------- 579 (891)
..|.+++.+|.+.++.+|+++|+++|++.. ...++++. ..|+.. |+++ +|++
T Consensus 109 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~ 185 (411)
T 3nnk_A 109 RCRAEVHTIEVPWGEVFTPDQVEDAVKRIR---PRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLE 185 (411)
T ss_dssp HTTCEEEEEECCTTCCCCHHHHHHHHHHHC---CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCC
T ss_pred HcCCeEEEEecCCCCCCCHHHHHHHHhhCC---CeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccc
Confidence 889999999999999999999999998631 12233332 455544 5442 2321
Q ss_pred ---CCccEEEEcCcccCCcccccEEEEEeCCccchhhhc----cCCCccccCCCCC--ccccC--------------Ccc
Q psy852 580 ---EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALV----VDPLYLQHGHEGA--IDYRH--------------WGI 636 (891)
Q Consensus 580 ---~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~----~~~~Yl~~~~e~~--~~~~~--------------~ti 636 (891)
..+|.+++++|||+++|.|+|+++++++. .+.+. ..+.|........ ..... ...
T Consensus 186 ~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~--~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 263 (411)
T 3nnk_A 186 TDVWGLDAVSAGMQKCLGGPSGTSPITLSARM--EEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERL 263 (411)
T ss_dssp TTTTTCSEEECCSTTTTCCCSSEEEEEECHHH--HHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCC
T ss_pred hhccCCcEEEecCccccCCCCceEEEEECHHH--HHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccC
Confidence 14799999999999999999999987652 11111 1122221110000 00000 000
Q ss_pred -ccccc-ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc---eeEEEEEecCCcchhhhhhHH
Q psy852 637 -PLSRR-FRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR---LGLVCFRLRSENNLIADQNNR 711 (891)
Q Consensus 637 -~~SRr-~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~---~~iV~Fr~~~~~~~~~d~ln~ 711 (891)
.++.. .....++.+++.+...|+++..++..++++++.+.|++. ++++..++. .++++|+++.. ....
T Consensus 264 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 336 (411)
T 3nnk_A 264 NHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQG------INGD 336 (411)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTT------CCHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCC------CCHH
Confidence 11111 223456677787788889999999999999999999986 787765543 57889988521 1356
Q ss_pred HHHHHHHhC-CcEEEeeccccCCeEE-EEe-cCCCCHHHHHHHHHHHHHHHH
Q psy852 712 KLLEDINAS-GRLHMVPASQEQNDEV-FEL-QERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 712 ~L~~~L~~~-G~~~~s~s~~~g~~~l-~sv-~~~tT~edId~li~~L~ei~~ 760 (891)
++.+.|.++ |+.+..+........+ +++ +..+|++||+++++.|+++..
T Consensus 337 ~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~ 388 (411)
T 3nnk_A 337 QARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLN 388 (411)
T ss_dssp HHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHH
Confidence 788888776 9876554433344566 997 667799999999999998874
No 360
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=98.25 E-value=4.4e-05 Score=92.31 Aligned_cols=255 Identities=11% Similarity=0.017 Sum_probs=147.2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC-----CCc-
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK-----NSL- 541 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~-----G~m- 541 (891)
+++|++.+|..++.+.- .+.-.|++...+|.|+..++.+.|.+++.++++.+ +.+
T Consensus 216 v~nGts~An~~ai~al~-------------------~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~~~i~ 276 (715)
T 3n75_A 216 VTNGTSTANKIVGMYSA-------------------PAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIP 276 (715)
T ss_dssp ESSHHHHHHHHHHHHHC-------------------CTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCCBCCCC
T ss_pred ECcHHHHHHHHHHHHhC-------------------CCCCEEEECCCccHHHHHHHHHcCCEEEEEeccccccccccCcc
Confidence 35566788877766531 12336999999999999999999999999987533 224
Q ss_pred ----CHHHHHHHHHhhhhcCCcc-EEEEec---CCccc--------hhh--------h---------h---cCCC---Cc
Q psy852 542 ----RGATLRQVMQQDETMGYIP-FFVSTT---LGTTS--------CYR--------K---------S---QGIE---YA 582 (891)
Q Consensus 542 ----D~~~Le~aI~~d~~~g~ip-~~Vvat---aGTT~--------c~~--------~---------l---dGi~---~a 582 (891)
|+++|+++|++..... .| ++|+.+ .|... |.. | . .++. .+
T Consensus 277 ~~~~d~e~Le~~l~~~~~~k-~p~~vivt~pn~~G~v~dl~~I~ela~~~~livDEAH~~~~~f~~~~~~~~al~~g~~a 355 (715)
T 3n75_A 277 QSEFQHATIAKRVKETPNAT-WPVHAVITNSTYDGLLYNTDFIKKTLDVKSIHFDSAWVPYTNFSPIYEGKCGMSGGRVE 355 (715)
T ss_dssp GGGGSHHHHHHHHHHSTTCC-SCSEEEEESSCTTSEEECHHHHHHHCCCSEEEEECTTCTTGGGSGGGTTSSTTSSSCCT
T ss_pred cccCCHHHHHHHHhhCcCcc-CceEEEEECCCCCCccCCHHHHHHHhCcCcEEEccccccccccCCccccccccccCcCC
Confidence 8999999998743211 12 223222 23332 211 1 1 1222 26
Q ss_pred cEE---EEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhH
Q psy852 583 DSF---NVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGL 659 (891)
Q Consensus 583 DSI---s~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~ 659 (891)
|.+ +.++||+|++|-++|++++++.... ..+.....++.+. ++.. .....+=.+++.+-...-
T Consensus 356 D~vii~~~S~hKtL~gltqgs~i~v~~~i~~-~~~~~~~~~~~ST----------Spsy---~~~AsldaA~~~~~~~~g 421 (715)
T 3n75_A 356 GKVIYETQSTHKLLAAFSQASMIHVKGDVNE-ETFNEAYMMHTTT----------SPHY---GIVASTETAAAMMKGNAG 421 (715)
T ss_dssp TCEEEEEECHHHHSSCCTTCEEEEEESCCCH-HHHHHHHHHTSCS----------SCCH---HHHHHHHHHHHHHSHHHH
T ss_pred CEEEEEEecccccccCCCCeeEEEeCchhhH-HHHHHHHHhhcCC----------CchH---HHHHHHHHHHHHHHhhcc
Confidence 776 8999999999999999999876211 1111111111100 0000 000111112222221122
Q ss_pred HHHHHHHHHHHHHHHHHhccCCC------cEEeCCCc-----------------------------eeEEEEEecCCcc-
Q psy852 660 QKYIRRHCELAKLFEGKVRRDPR------FEISNDVR-----------------------------LGLVCFRLRSENN- 703 (891)
Q Consensus 660 ~~~i~~~~~lA~~L~~~L~~~~~------~eil~~~~-----------------------------~~iV~Fr~~~~~~- 703 (891)
.+..++..+++++|.++|+++++ |+++.+.. ..-+.+..++.+.
T Consensus 422 ~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~ 501 (715)
T 3n75_A 422 KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKD 501 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCC
Confidence 44678889999999999987753 56665431 1223333322110
Q ss_pred ---hhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 704 ---LIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 704 ---~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+..--...+.+.|.+.|+. ....+.+.+ +.++...|++++++++++|.++..
T Consensus 502 G~~~~~Gi~g~~~~~~L~~~~I~----~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~ 558 (715)
T 3n75_A 502 GTMSDFGIPASIVAKYLDEHGIV----VEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (715)
T ss_dssp SCBCSSCCCHHHHHHHHHHTTCC----CSEEETTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CccccCCCcHHHHHHHHHHCCCE----EEecCCCcEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 00011123566677777876 444445555 778888899999999999998864
No 361
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=97.55 E-value=1.5e-07 Score=104.88 Aligned_cols=89 Identities=9% Similarity=0.016 Sum_probs=69.8
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEecC-CC--CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEPD-DK--NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIG 218 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~d-~~--g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~ 218 (891)
|++..-+|++...++...+.+++.++.+ ++ +.+|+++|++.+++.. +.+|+++..+|.+|.+-| +++|+
T Consensus 116 vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~l~ 190 (392)
T 3b1d_A 116 VLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVEND-----VKLYLLCNPHNPGGRVWEREVLEQIG 190 (392)
Confidence 6677778888888776667788888885 33 4599999999887321 235556778899999865 89999
Q ss_pred HHHHHcCCceeeeccccCCc
Q psy852 219 PVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG~~ 238 (891)
++|+++|+++++|.+|+++.
T Consensus 191 ~~~~~~~~~li~De~~~~~~ 210 (392)
T 3b1d_A 191 HLCQKHHVILVSDEIHQDLT 210 (392)
Confidence 99999999999999996543
No 362
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=98.22 E-value=2.2e-05 Score=88.73 Aligned_cols=271 Identities=11% Similarity=-0.019 Sum_probs=142.4
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++++++.+.....=+++ +++||+++|..++.++|... + +.-+|+.....|.+...++.+
T Consensus 89 ~~l~~~la~~~~~~~~~~v~--~~~ggsea~~~al~~~~~~~-~---------------~~~vi~~~~~yhg~~~~~~~~ 150 (439)
T 3dxv_A 89 VTLAERLLASFPGEGTHKIW--FGHSGSDANEAAYRAIVKAT-G---------------RSGVIAFAGAYHGCTVGSMAF 150 (439)
T ss_dssp HHHHHHHHHTTTCTTTEEEE--EESSHHHHHHHHHHHHHHHH-S---------------CCEEEEETTCCCCSSHHHHCC
T ss_pred HHHHHHHHHhCCCCCCCEEE--EeCCHHHHHHHHHHHHHHHh-C---------------CCEEEEECCCCCCCcHHHHhh
Confidence 45566666665321101556 78899999999999887532 1 223566667777766666544
Q ss_pred cCce--------------EEEecCCCCCCc-----CHHHHHHHHHhhhhcCCccEEEE-ec---CCccc-----------
Q psy852 526 AFVR--------------LKILEPDDKNSL-----RGATLRQVMQQDETMGYIPFFVS-TT---LGTTS----------- 571 (891)
Q Consensus 526 ~gv~--------------v~~Vp~d~~G~m-----D~~~Le~aI~~d~~~g~ip~~Vv-at---aGTT~----------- 571 (891)
.+.. +..+|.+..+.- |+++|+++|++... ..+.++++ .. .|...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~ 229 (439)
T 3dxv_A 151 SGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPA-GSIGAAFIEPIQSDGGLIVPPDGFLRKFAD 229 (439)
T ss_dssp -------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCT-TCEEEEEECSSBSTTTSBCCCTTHHHHHHH
T ss_pred cCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCC-CCEEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 3321 234555433333 79999999952111 12222332 22 23322
Q ss_pred -hhhh-----hc----CC-------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCC
Q psy852 572 -CYRK-----SQ----GI-------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGA 628 (891)
Q Consensus 572 -c~~~-----ld----Gi-------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~ 628 (891)
|.+| +| |+ ...|.+++ .|.+++-+.+|+++.+.+ +.+.+... .
T Consensus 230 l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~--sK~~~~G~riG~~~~~~~--~~~~~~~~----~------ 295 (439)
T 3dxv_A 230 ICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVL--GKGLGGGLPLSAVIAPAE--ILDCASAF----A------ 295 (439)
T ss_dssp HHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEE--CGGGGTTSCCEEEEEEHH--HHTSCSSS----S------
T ss_pred HHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEE--cchhcCCcceEEEEECHH--HHhhhcCC----C------
Confidence 3331 11 11 11466655 588876556788887653 21111100 0
Q ss_pred ccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc----CCCcEEeCCCceeEEEEEecCCc--
Q psy852 629 IDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR----DPRFEISNDVRLGLVCFRLRSEN-- 702 (891)
Q Consensus 629 ~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~----~~~~eil~~~~~~iV~Fr~~~~~-- 702 (891)
...+. ...+.+.+++..+....-.+.+++..++.+++.+.|++ .+.+... ++..+++.|.+.+..
T Consensus 296 ---~~~t~-----~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~ 366 (439)
T 3dxv_A 296 ---MQTLH-----GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGLACGMELVCDRQS 366 (439)
T ss_dssp ---CCTTT-----TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTT
T ss_pred ---cCCCc-----ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccc
Confidence 00111 12233333333332111133455556666666666654 3444332 223456666663210
Q ss_pred chhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 703 NLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 703 ~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
...-......+.+.|.++|+++..+. .....+ ++++..+|+++++++++.|++++.
T Consensus 367 ~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 423 (439)
T 3dxv_A 367 REPARAETAKLIYRAYQLGLVVYYVG--MNGNVLEFTPPLTITETDIHKALDLLDRAFS 423 (439)
T ss_dssp TEECHHHHHHHHHHHHHHTEECEEES--TTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHCCcEEeecC--CCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 00013345678888888898754332 123556 888888899999999999998874
No 363
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.21 E-value=7.8e-05 Score=83.91 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=54.7
Q ss_pred eEEEEecCCC---CcccHHHHHHHHHhhhhcCCcceEEEeecccC-ccccccC----HHHHHHHHHHcCCceeeeccccC
Q psy852 165 RLKILEPDDK---NSLRGATLRQVMQQDETMGYIPFFVSTTLGTT-SCCSFDN----LAEIGPVAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 165 ~v~~V~~d~~---g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt-~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG 236 (891)
.+..++.+.. +..|+++|++.+++.. ...+.+|+++-.++ .+|.+-+ +++|+++|++||++|++|-+|.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~ 236 (430)
T 3i4j_A 159 AWPKLPKPDPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSG 236 (430)
T ss_dssp GSCEECCCCTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred CceEcCCCcccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 4455665544 5678999999997521 02246777777777 8898888 99999999999999999999966
Q ss_pred Cc
Q psy852 237 SS 238 (891)
Q Consensus 237 ~~ 238 (891)
+.
T Consensus 237 ~~ 238 (430)
T 3i4j_A 237 MG 238 (430)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 364
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.21 E-value=2.5e-05 Score=87.99 Aligned_cols=221 Identities=10% Similarity=-0.026 Sum_probs=128.4
Q ss_pred EEEecccchHHHHHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe----cCCccc-----------h
Q psy852 508 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST----TLGTTS-----------C 572 (891)
Q Consensus 508 vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva----taGTT~-----------c 572 (891)
.|++..-+|.....++...|.+++.+|.+++| +|+++|++++++. ....++++. ..|++. |
T Consensus 133 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~---~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~ 208 (422)
T 3d6k_A 133 KWLCPVPGYDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKDP---QVKGMWTVPVFGNPTGVTFSEQTCRELAEMS 208 (422)
T ss_dssp EEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTST---TEEEEEECCSSCTTTCCCCCHHHHHHHHHCC
T ss_pred EEEEeCCccHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhcC---CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHH
Confidence 47777788888888888889999999998777 9999999999642 111222222 245543 4
Q ss_pred h-hh-----hcCC-------------------------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCc
Q psy852 573 Y-RK-----SQGI-------------------------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLY 620 (891)
Q Consensus 573 ~-~~-----ldGi-------------------------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Y 620 (891)
. ++ .|.+ ...+-+..+++|+ +.| ..+|+++...+ +.+.+.....+
T Consensus 209 ~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~~~--l~~~l~~~~~~ 285 (422)
T 3d6k_A 209 TAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASSKE--NIEWYASHANV 285 (422)
T ss_dssp CSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECCHH--HHHHHHHHHHH
T ss_pred hhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeCHH--HHHHHHHHHHh
Confidence 4 31 1110 0123446678998 555 55898887632 22222110000
Q ss_pred cccCCCCCccccCCcccccccccchHHHHHHHHHHH-hh----HHHHHHHHHHHHHHHHHHhcc----CCCcEEeCCCce
Q psy852 621 LQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL-SG----LQKYIRRHCELAKLFEGKVRR----DPRFEISNDVRL 691 (891)
Q Consensus 621 l~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~-~G----~~~~i~~~~~lA~~L~~~L~~----~~~~eil~~~~~ 691 (891)
..++ ...+.++++...+.. .. +++..+...+..+++.+.|++ .+++++..+...
T Consensus 286 -----------~~~~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g 348 (422)
T 3d6k_A 286 -----------RGIG------PNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGG 348 (422)
T ss_dssp -----------HCSC------CCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBS
T ss_pred -----------hcCC------CCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcc
Confidence 0001 112344444444433 22 233333334455555555543 344666555455
Q ss_pred eEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc-c-----cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 692 GLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS-Q-----EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 692 ~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~-~-----~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+.+++++++. ..+.+.+.|.+.|+.+..+.. . .+...+ ++++. +++++++++++.|+++..
T Consensus 349 ~~~~~~~~~~-------~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~ 416 (422)
T 3d6k_A 349 YFISVDVVPG-------TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVL 416 (422)
T ss_dssp SCEEEEESTT-------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCC-------CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHH
Confidence 6778888532 245677888889987544222 2 134566 88887 899999999999998864
No 365
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=98.21 E-value=9.5e-05 Score=83.78 Aligned_cols=283 Identities=11% Similarity=0.031 Sum_probs=148.9
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++.+++.+...+. +++ +++||+|++..++.+++.....+ |...++-+|+.+..-|.+...++.+
T Consensus 96 ~~l~~~la~~~~~~~~-~v~--~~~ggsea~~~al~~~~~~~~~~----------g~~~~~~vi~~~~~yhg~~~~~~~~ 162 (449)
T 3a8u_X 96 FQLAEKITDLTPGNLN-HVF--FTDSGSECALTAVKMVRAYWRLK----------GQATKTKMIGRARGYHGVNIAGTSL 162 (449)
T ss_dssp HHHHHHHHTTSSTTEE-EEE--EESSHHHHHHHHHHHHHHHHHHT----------TCTTCCEEEEETTCCCCSSHHHHHH
T ss_pred HHHHHHHHHhCCCCCC-EEE--EcCcHHHHHHHHHHHHHHHHHhc----------CCCCCCEEEEECCCcCCCChhhhhc
Confidence 3555666666542222 455 78999999999999887643211 1111234566677777666555544
Q ss_pred cC------------ceEEEecCCCCC-----CcC--------HHHHHHHHHhhhhcCCccEEEEe----cCCccc-----
Q psy852 526 AF------------VRLKILEPDDKN-----SLR--------GATLRQVMQQDETMGYIPFFVST----TLGTTS----- 571 (891)
Q Consensus 526 ~g------------v~v~~Vp~d~~G-----~mD--------~~~Le~aI~~d~~~g~ip~~Vva----taGTT~----- 571 (891)
.+ ..++.+|++... .+| +++|+++|++... ..+-++++. ..|...
T Consensus 163 ~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~-~~~~~vi~~p~~~~tG~~~~~~~~ 241 (449)
T 3a8u_X 163 GGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDA-SNIAAVFVEPLAGSAGVLVPPEGY 241 (449)
T ss_dssp CCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCG-GGEEEEEECSSBTTTTCBCCCTTH
T ss_pred cCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCC-CCEEEEEEcCccCCCCCccCCHHH
Confidence 32 135556553221 256 9999999975310 112223322 235322
Q ss_pred -------hhhh-----hc----CC-------------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCcc
Q psy852 572 -------CYRK-----SQ----GI-------------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYL 621 (891)
Q Consensus 572 -------c~~~-----ld----Gi-------------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl 621 (891)
|.++ +| |+ -..|.+++ .|++++- +.+|+++++++ +.+.+.....
T Consensus 242 l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~--sK~l~~G~~~~G~~~~~~~--~~~~l~~~~~-- 315 (449)
T 3a8u_X 242 LKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCI--AKQVTNGAIPMGAVIASTE--IYQTFMNQPT-- 315 (449)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTTSSCCEEEEEEHH--HHHHHHTCSS--
T ss_pred HHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEE--cccccCCCCceEEEEECHH--HHHHhhccCc--
Confidence 3331 11 11 12477755 4988742 34899988753 2233321100
Q ss_pred ccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeC--CCceeEEEEEec
Q psy852 622 QHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN--DVRLGLVCFRLR 699 (891)
Q Consensus 622 ~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~--~~~~~iV~Fr~~ 699 (891)
...+... ....+... -++.......+++.+..+ +..++..++.+++.+.|++++.+.++. ++..+++++.+.
T Consensus 316 -~~~~~~~-~~~~t~~~-~~~~~aa~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~ 389 (449)
T 3a8u_X 316 -PEYAVEF-PHGYTYSA-HPVACAAGLAALCLLQKE---NLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIA 389 (449)
T ss_dssp -CTTSCSS-CCCCTTTT-CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEEC
T ss_pred -ccccccc-cccCCCcc-cHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEe
Confidence 0000000 00011111 111122223344433333 356667778888888887754332221 223467888885
Q ss_pred CCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 700 SENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 700 ~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+..... ......+.+.|.++|+++..+ + ..+ ++++..+|++||+++++.|++++.
T Consensus 390 ~~~~~~-~~~~~~~~~~l~~~Gv~v~~~----g-~~iRis~~~~~t~~~i~~~l~~l~~~l~ 445 (449)
T 3a8u_X 390 PRDGDA-IVRPFEAGMALWKAGFYVRFG----G-DTLQFGPTFNSKPQDLDRLFDAVGEVLN 445 (449)
T ss_dssp CBTTBS-SHHHHHHHHHHHHHTEECEEE----T-TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCcccc-cccHHHHHHHHHHCCcEEecC----C-CEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 431000 001235888888889874433 2 456 888888999999999999998763
No 366
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=98.21 E-value=1.5e-05 Score=89.93 Aligned_cols=215 Identities=10% Similarity=0.074 Sum_probs=124.3
Q ss_pred EEEecccchHHHHHHH----HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------h
Q psy852 508 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------C 572 (891)
Q Consensus 508 vI~~S~~aH~Sv~Kaa----~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c 572 (891)
.|+++...|.+..... ...|++++.+|.+ |+++|+++|++.+ ..+++. +..|... |
T Consensus 107 ~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~t----~~v~~~~p~nptG~~~~l~~i~~la 177 (403)
T 3cog_A 107 QIICMDDVYGGTNRYFRQVASEFGLKISFVDCS-----KIKLLEAAITPET----KLVWIETPTNPTQKVIDIEGCAHIV 177 (403)
T ss_dssp EEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT-----SHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCcCC----eEEEEECCCCCCCeeeCHHHHHHHH
Confidence 5788888888765543 3468899999886 8999998887532 122222 2234333 3
Q ss_pred hhh------hcC----------C-CCccEEEEcCcccCCcccc--cEEEEEeCCccchhhhccCCCccccCCCCCccccC
Q psy852 573 YRK------SQG----------I-EYADSFNVNVNKWLLTAFD--SSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRH 633 (891)
Q Consensus 573 ~~~------ldG----------i-~~aDSIs~d~HK~L~~P~g--~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~ 633 (891)
+++ +|. + -.+|.+..++||++++|.+ +|+++.+++..... +.. +.. .
T Consensus 178 ~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~-l~~---~~~----------~ 243 (403)
T 3cog_A 178 HKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNR-LRF---LQN----------S 243 (403)
T ss_dssp TSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHH-HHH---HHH----------H
T ss_pred HHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHH-HHH---HHH----------h
Confidence 321 111 1 2479999999999999987 48888876543221 110 000 0
Q ss_pred CcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC--------------CcEEeCC---CceeEEEE
Q psy852 634 WGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDP--------------RFEISND---VRLGLVCF 696 (891)
Q Consensus 634 ~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~--------------~~eil~~---~~~~iV~F 696 (891)
++. ....+.+|+.++. .+.+...+++..++++.+.+.|++.+ ++++..+ ...++++|
T Consensus 244 ~g~----~~~~~~~~~~~~~--l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~ 317 (403)
T 3cog_A 244 LGA----VPSPIDCYLCNRG--LKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTF 317 (403)
T ss_dssp HCC----CCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEE
T ss_pred cCC----CCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEE
Confidence 000 0123455665543 34455566666666666666665543 3333221 12679999
Q ss_pred EecCCcchhhhhhHHHHHHHHHhCCcEEEe---e---------c--c-c---------cC--CeEE-EEecCCCCHHHHH
Q psy852 697 RLRSENNLIADQNNRKLLEDINASGRLHMV---P---------A--S-Q---------EQ--NDEV-FELQERKRKDDLA 749 (891)
Q Consensus 697 r~~~~~~~~~d~ln~~L~~~L~~~G~~~~s---~---------s--~-~---------~g--~~~l-~sv~~~tT~edId 749 (891)
.+++. . +.+...|.+.|++... + . . . .+ ...+ +|++..+++++|+
T Consensus 318 ~l~~~-----~---~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~ 389 (403)
T 3cog_A 318 YIKGT-----L---QHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLE 389 (403)
T ss_dssp EESSC-----H---HHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHH
T ss_pred EecCC-----H---HHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHH
Confidence 98642 1 3344455556664321 1 0 0 0 02 4567 9999988999999
Q ss_pred HHHHHHHHHH
Q psy852 750 YKRSFFVRML 759 (891)
Q Consensus 750 ~li~~L~ei~ 759 (891)
.+.++|+++.
T Consensus 390 ~l~~al~~~~ 399 (403)
T 3cog_A 390 DLDQALKAAH 399 (403)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9988887653
No 367
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=98.20 E-value=8e-06 Score=90.84 Aligned_cols=247 Identities=11% Similarity=0.002 Sum_probs=147.9
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC------
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD------ 536 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d------ 536 (891)
+|+ +++|+++++..++.+... +.-.|++..-.|......+...|.+++.+|.+
T Consensus 87 ~i~--~~~g~~~a~~~~~~~~~~-------------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g 145 (410)
T 3e2y_A 87 EIL--VAVGAYGSLFNSIQGLVD-------------------PGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145 (410)
T ss_dssp SEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCS
T ss_pred CEE--EeCCcHHHHHHHHHHhcC-------------------CCCEEEEeCCCchhhHHHHHHcCCEEEEEecccccccc
Confidence 555 678999999888766411 11247777788888888888889999998876
Q ss_pred -----CCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hc---------C-----
Q psy852 537 -----DKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQ---------G----- 578 (891)
Q Consensus 537 -----~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ld---------G----- 578 (891)
.++.+|+++|++++++.+ ..++++ +..|+.. |.++ +| |
T Consensus 146 ~~~~~~~~~~d~~~l~~~~~~~~----~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~ 221 (410)
T 3e2y_A 146 MKWTSSDWTFDPRELESKFSSKT----KAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVK 221 (410)
T ss_dssp SCCBGGGEECCHHHHHTTCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC
T ss_pred ccccccCCcCCHHHHHhhcCCCc----eEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCC
Confidence 456799999999886431 122332 2345542 3331 11 1
Q ss_pred ---C---CCccEEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHH
Q psy852 579 ---I---EYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVI 651 (891)
Q Consensus 579 ---i---~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L 651 (891)
+ ...+-+..+.+|.++ .-..+|+++.+++ +.+.+.. +... ..++ ...+.+++..
T Consensus 222 ~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~--~~~~~~~---~~~~--------~~~~------~~~~~~~a~~ 282 (410)
T 3e2y_A 222 IATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAH--LIKHLQT---VQQN--------SFYT------CATPLQAALA 282 (410)
T ss_dssp GGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHH--HHHHHHH---HHHT--------TTCC------CCHHHHHHHH
T ss_pred HHHcCCccCeEEEEecchhhcCCCCceEEEEEECHH--HHHHHHH---HHHh--------hccC------CChHHHHHHH
Confidence 0 012255667899997 4467888876543 2221110 0000 0011 1122333333
Q ss_pred HHHH---------HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhh------hhHHHHHHH
Q psy852 652 RTYG---------LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIAD------QNNRKLLED 716 (891)
Q Consensus 652 ~~lG---------~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d------~ln~~L~~~ 716 (891)
..+. .+.+++..++..+++++|.+.|++. ++++..+.....+++.+..... .++ ....++...
T Consensus 283 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 360 (410)
T 3e2y_A 283 EAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKW 360 (410)
T ss_dssp HHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHH
T ss_pred HHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEchhhhc-ccccccccccCHHHHHHH
Confidence 3332 4456777788889999999999987 7887766555667777653210 001 112356665
Q ss_pred H-HhCCcEEEeecccc-------CCeEE-EEecCCCCHHHHHHHHHHHHH
Q psy852 717 I-NASGRLHMVPASQE-------QNDEV-FELQERKRKDDLAYKRSFFVR 757 (891)
Q Consensus 717 L-~~~G~~~~s~s~~~-------g~~~l-~sv~~~tT~edId~li~~L~e 757 (891)
| .+.|+++..+.... +...+ +++.. ++++|+++++.|++
T Consensus 361 ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 361 MTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp HHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC--CHHHHHHHHHHHHT
T ss_pred HHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHh
Confidence 5 56788766555442 24566 88654 99999999988864
No 368
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=98.19 E-value=2.8e-05 Score=88.66 Aligned_cols=209 Identities=11% Similarity=0.105 Sum_probs=124.0
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHH----HHHHcCceEEEecCCCCCCcCHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEK----AAMMAFVRLKILEPDDKNSLRGA 544 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~K----aa~l~gv~v~~Vp~d~~G~mD~~ 544 (891)
.++|++++..++.+. . .+.-.|+++...|.+... .+...|++++.+|.+ |++
T Consensus 103 ~~sG~~Ai~~al~al----~---------------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~-----d~~ 158 (430)
T 3ri6_A 103 LGSGMAAISTAILTL----A---------------RAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM-----DSL 158 (430)
T ss_dssp ESCHHHHHHHHHHHH----C---------------CTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT-----CHH
T ss_pred ECCHHHHHHHHHHHH----h---------------CCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHH
Confidence 456688888777654 1 022357888888887777 445678899999886 899
Q ss_pred HHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcCC-----------CCccEEEEcCcccCCcc-
Q psy852 545 TLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQGI-----------EYADSFNVNVNKWLLTA- 596 (891)
Q Consensus 545 ~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldGi-----------~~aDSIs~d~HK~L~~P- 596 (891)
+|+++|++.++ .+++.. ..|... |+++ +|.. .++|.+..++||++++|
T Consensus 159 ~l~~ai~~~t~----~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g 234 (430)
T 3ri6_A 159 AVEHACDETTK----LLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGG 234 (430)
T ss_dssp HHHHHCCTTEE----EEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTE
T ss_pred HHHHhhCCCCe----EEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCC
Confidence 99999875321 222222 234332 3331 2221 24799999999999987
Q ss_pred -cccEEEEEeCCccchh-----hh---ccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHH
Q psy852 597 -FDSSCLWVADRYKLTS-----AL---VVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHC 667 (891)
Q Consensus 597 -~g~G~llvR~~~~L~~-----~l---~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~ 667 (891)
.-.|+++.+....... .+ .....|+... ...+....+-....+..|..++ |.+.+..++++..
T Consensus 235 ~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~------~~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~ 306 (430)
T 3ri6_A 235 TSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKA------RKEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSC 306 (430)
T ss_dssp EECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHH------HHTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CceEEEEEECChHHhhhccchhhhhhhhchhhHHHHH------HHHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHH
Confidence 3456665554422210 00 0000000000 0000000111123445565544 7778888899999
Q ss_pred HHHHHHHHHhccCCCcEEeCCCc----------------ee-EEEEEecCCcchhhhhhHHHHHHHHHh
Q psy852 668 ELAKLFEGKVRRDPRFEISNDVR----------------LG-LVCFRLRSENNLIADQNNRKLLEDINA 719 (891)
Q Consensus 668 ~lA~~L~~~L~~~~~~eil~~~~----------------~~-iV~Fr~~~~~~~~~d~ln~~L~~~L~~ 719 (891)
++++++.+.|++.|.++-+..|. -+ +++|.+++ .....++++.|..
T Consensus 307 ~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~------~~~~~~~~~~l~~ 369 (430)
T 3ri6_A 307 QNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES------KEASYRFMDALKL 369 (430)
T ss_dssp HHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS------HHHHHHHHHHCSS
T ss_pred HHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC------HHHHHHHHHhCCc
Confidence 99999999999999988654443 34 99999963 2345666666654
No 369
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=98.19 E-value=1.8e-05 Score=89.18 Aligned_cols=84 Identities=11% Similarity=-0.005 Sum_probs=59.8
Q ss_pred EEecCCCChHHHHHHHHcC------------CeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCcccccc
Q psy852 145 AYCSKEAHSCVEKAAMMAF------------VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFD 212 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~------------~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavD 212 (891)
|++..-+|.++..++...+ .+++.++++.++.++.+ |++ . ..+.+|+++..+|.+|.+-
T Consensus 145 Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~----~----~~~~~v~l~~p~NPtG~~~ 215 (432)
T 3ei9_A 145 IAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPD-LST----V----GRTDIIFFCSPNNPTGAAA 215 (432)
T ss_dssp EEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCC-GGG----C----CCCSEEEEESSCTTTCCCC
T ss_pred EEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCC-hhh----C----CCCCEEEEeCCCCCCCCCC
Confidence 7788889999988886533 36888998765433322 221 1 1134566667899999885
Q ss_pred C---HHHHHHHHHHcCCceeeeccccCC
Q psy852 213 N---LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 213 p---l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+ +.+|+++|+++|+++++|.||+++
T Consensus 216 ~~~~l~~l~~la~~~~~~li~Dea~~~~ 243 (432)
T 3ei9_A 216 TREQLTQLVEFAKKNGSIIVYDSAYAMY 243 (432)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTGGG
T ss_pred CHHHHHHHHHHHHHcCcEEEEccchHhh
Confidence 4 667777899999999999999654
No 370
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.18 E-value=6.7e-06 Score=93.56 Aligned_cols=252 Identities=8% Similarity=0.005 Sum_probs=149.3
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCC-----
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDD----- 537 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~----- 537 (891)
+|+ +++|+++++..++.+... +.-.|++..-.|.+...++...|.+++.+|.++
T Consensus 120 ~v~--~t~G~~~al~~~~~~l~~-------------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 178 (447)
T 3b46_A 120 NVT--VTTGANEGILSCLMGLLN-------------------AGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELD 178 (447)
T ss_dssp GEE--EESHHHHHHHHHHHHHCC-------------------TTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGG
T ss_pred hEE--EeCCHHHHHHHHHHHHcC-------------------CCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccc
Confidence 565 788999999988776421 112477777788888888888899999998754
Q ss_pred -------CCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh--------------hcC----
Q psy852 538 -------KNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK--------------SQG---- 578 (891)
Q Consensus 538 -------~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~--------------ldG---- 578 (891)
++.+|+++|+++|++.+ ..++++. ..|.+. |.++ .+|
T Consensus 179 ~~~~~~~~~~~d~~~l~~~l~~~~----~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~ 254 (447)
T 3b46_A 179 QRNTRGEEWTIDFEQFEKAITSKT----KAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTR 254 (447)
T ss_dssp TSCBCSTTSEECHHHHHTTCCTTE----EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCC
T ss_pred cccccccCcccCHHHHHHhhccCC----eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcC
Confidence 46899999999886421 1233332 245542 3331 111
Q ss_pred ---C----CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 579 ---I----EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 579 ---i----~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
+ ...|-+..++||+++.| ..+|+++.++++.+.. +.....+ ..++. + ......+..+
T Consensus 255 ~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~-l~~~~~~-----------~~~~~--~-~~~~~a~~~a 319 (447)
T 3b46_A 255 IATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSY-AAKAHTR-----------ICFAS--P-SPLQEACANS 319 (447)
T ss_dssp GGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHH-HHHHHHH-----------HTSSC--C-HHHHHHHHHH
T ss_pred HHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHH-HHHHHhh-----------ccCCC--C-hHHHHHHHHH
Confidence 1 13577788999998744 4589988844433322 1100000 00111 1 0111122223
Q ss_pred HHHHH-HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCc-chhh--------hhhHHHHHHHHH-h
Q psy852 651 IRTYG-LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSEN-NLIA--------DQNNRKLLEDIN-A 719 (891)
Q Consensus 651 L~~lG-~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~-~~~~--------d~ln~~L~~~L~-~ 719 (891)
|+... ...+++..++..+++++|.+.|++. ++++..+.....+++++++.. +... .....++.+.|. +
T Consensus 320 L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 398 (447)
T 3b46_A 320 INDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINE 398 (447)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHH
T ss_pred HhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHh
Confidence 33222 2346667778888999999999886 677765544556777775320 0000 123457888776 5
Q ss_pred CCcEEEeecccc-------CCeEE-EEecCCCCHHHHHHHHHHHHH
Q psy852 720 SGRLHMVPASQE-------QNDEV-FELQERKRKDDLAYKRSFFVR 757 (891)
Q Consensus 720 ~G~~~~s~s~~~-------g~~~l-~sv~~~tT~edId~li~~L~e 757 (891)
.|+++..+.... +...+ +++.. ++++|+++++.|++
T Consensus 399 ~gV~v~pg~~f~~~~~~~~~~~~iRls~~~--~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 399 LGVVAIPPTEFYIKEHEKAAENLLRFAVCK--DDAYLENAVERLKL 442 (447)
T ss_dssp TCEECBCGGGGSCGGGGGGGTTEEEEECCS--CHHHHHHHHHHGGG
T ss_pred CCEEEECchHhCCCCccCCCCCEEEEEEeC--CHHHHHHHHHHHHH
Confidence 788754443221 24556 88763 79999999988865
No 371
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=98.16 E-value=0.0001 Score=83.53 Aligned_cols=93 Identities=12% Similarity=-0.011 Sum_probs=64.5
Q ss_pred eEEEecCCCChHHHHHHHHcC------------CeEEEEecCCCCc-----cc--------HHHHHHHHHhhhhcCCcce
Q psy852 143 LMAYCSKEAHSCVEKAAMMAF------------VRLKILEPDDKNS-----LR--------GATLRQVMQQDETMGYIPF 197 (891)
Q Consensus 143 ~~v~~S~~~H~Sv~kaa~~~~------------~~v~~V~~d~~g~-----id--------~~~L~~~l~~~~~~g~~p~ 197 (891)
-+|+.+..-|.+...++.+.+ ..+..|+++...+ +| +++|++.|++.. ...+.
T Consensus 144 ~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~ 221 (449)
T 3a8u_X 144 KMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIA 221 (449)
T ss_dssp EEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEE
T ss_pred EEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEE
Confidence 345556777876665554432 2456666543211 46 999999997521 01245
Q ss_pred EEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 198 FVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 198 ~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+|+++-.++.+|.+-| +++|+++|++||++|++|.++.|+
T Consensus 222 ~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~ 265 (449)
T 3a8u_X 222 AVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGF 265 (449)
T ss_dssp EEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCc
Confidence 7777766677999888 999999999999999999999654
No 372
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=98.16 E-value=8e-05 Score=84.47 Aligned_cols=84 Identities=10% Similarity=0.059 Sum_probs=51.8
Q ss_pred EEEecCCCChHHHHHHHHcC------------CeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc
Q psy852 144 MAYCSKEAHSCVEKAAMMAF------------VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF 211 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~------------~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav 211 (891)
+|+....-|.+...++.+.+ ..+..+|.+ |+++|++.++.. .+.+|+++-.++.+|.+
T Consensus 159 vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l~~~-----~~~~vi~ep~~~~~G~~ 228 (433)
T 1z7d_A 159 IVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEELKDP-----NVCAFIVEPIQGEAGVI 228 (433)
T ss_dssp EEEETTC--------------------------CEEEECTT-----CHHHHHHHHTST-----TEEEEEECSSBSTTTSB
T ss_pred EEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCCC-----CEEEEEEECCCCCCCcc
Confidence 44454556766655544322 245556543 899999998521 14566776666678876
Q ss_pred c----CHHHHHHHHHHcCCceeeeccccCC
Q psy852 212 D----NLAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 212 D----pl~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
- ++++|.++|++||++|++|.++.|+
T Consensus 229 ~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 258 (433)
T 1z7d_A 229 VPSDNYLQGVYDICKKYNVLFVADEVQTGL 258 (433)
T ss_dssp CCCTTHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEecCccCC
Confidence 5 8999999999999999999999764
No 373
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=98.15 E-value=2.1e-05 Score=89.13 Aligned_cols=205 Identities=11% Similarity=0.074 Sum_probs=124.7
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH----HcCceEEEecCCCCCCcCH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM----MAFVRLKILEPDDKNSLRG 543 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~----l~gv~v~~Vp~d~~G~mD~ 543 (891)
++++|++++..++.+.. .+.-.|+++...|.+....+. ..|++++.+|.+ |+
T Consensus 101 ~~~sG~~Ai~~al~~l~-------------------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-----d~ 156 (414)
T 3ndn_A 101 ATASGMAAVFTSLGALL-------------------GAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD-----DL 156 (414)
T ss_dssp EESSHHHHHHHHHHTTC-------------------CTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-----CH
T ss_pred EECCHHHHHHHHHHHHh-------------------CCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-----CH
Confidence 56778999877765531 112347778888887766664 378899999886 89
Q ss_pred HHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcC----------C-CCccEEEEcCcccCCcc
Q psy852 544 ATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQG----------I-EYADSFNVNVNKWLLTA 596 (891)
Q Consensus 544 ~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldG----------i-~~aDSIs~d~HK~L~~P 596 (891)
++|+++|++.+ ..+++.. ..|... |.++ +|. + .++|.+..++||+++.+
T Consensus 157 ~~l~~ai~~~t----~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~ 232 (414)
T 3ndn_A 157 SQWERALSVPT----QAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQ 232 (414)
T ss_dssp HHHHHHTSSCC----SEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCS
T ss_pred HHHHHhcCCCC----eEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCC
Confidence 99999987532 2233322 234433 4331 222 1 24799999999999876
Q ss_pred cc--cEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q psy852 597 FD--SSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFE 674 (891)
Q Consensus 597 ~g--~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~ 674 (891)
-. .|+++.+++. +.+.+...... + +-....+..|..++ +.+.+...+++..++++++.
T Consensus 233 G~~~~G~vv~~~~~-~~~~l~~~~~~-------------~----g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~ 292 (414)
T 3ndn_A 233 GRVLGGAILGDREY-IDGPVQKLMRH-------------T----GPAMSAFNAWVLLK--GLETLAIRVQHSNASAQRIA 292 (414)
T ss_dssp SCCCCEEEEECHHH-HTTHHHHHHHH-------------H----CCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEECHHH-HHHHHHHHHHH-------------c----CCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 43 6777776542 22111100000 0 11123345565554 66778888999999999999
Q ss_pred HHhccCCCcEEeCCCc-----------------eeEEEEEecCCcchhhhhhHHHHHHHHHhCC
Q psy852 675 GKVRRDPRFEISNDVR-----------------LGLVCFRLRSENNLIADQNNRKLLEDINASG 721 (891)
Q Consensus 675 ~~L~~~~~~eil~~~~-----------------~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G 721 (891)
+.|++.|.++.+..|. -++++|.+++... .....+.++++.|...+
T Consensus 293 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~-~~~~~~~~~~~~l~~~~ 355 (414)
T 3ndn_A 293 EFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED-VAKQRAFEVLDKMRLID 355 (414)
T ss_dssp HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG-GHHHHHHHHHHHCSSSE
T ss_pred HHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc-ccHHHHHHHHHhCccce
Confidence 9999988876543222 3689999964200 00124556777776544
No 374
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=98.14 E-value=9.1e-05 Score=80.66 Aligned_cols=269 Identities=13% Similarity=0.111 Sum_probs=179.2
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH-
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM- 525 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l- 525 (891)
++.+.+++.+...+. +++ +++|+++++..++.+......+ +.-.|+++..+|++...++.+
T Consensus 47 ~~~~~la~~~~~~~~-~i~--~~~g~~~a~~~~~~~~~~~~~~---------------~gd~vi~~~~~~~~~~~~~~~~ 108 (382)
T 4hvk_A 47 EAREKVAKLVNGGGG-TVV--FTSGATEANNLAIIGYAMRNAR---------------KGKHILVSAVEHMSVINPAKFL 108 (382)
T ss_dssp HHHHHHHHHTTCTTE-EEE--EESSHHHHHHHHHHHHHHHHGG---------------GCCEEEEETTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcC-eEE--EECCchHHHHHHHHHhhhhhcC---------------CCCEEEECCCCcHHHHHHHHHH
Confidence 344466666655333 466 6889999999988776542211 223689999999999888764
Q ss_pred --cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec-----CCccc--------hhhh----hcCC-------
Q psy852 526 --AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT-----LGTTS--------CYRK----SQGI------- 579 (891)
Q Consensus 526 --~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat-----aGTT~--------c~~~----ldGi------- 579 (891)
.|++++.+|+++++.+|+++|+++|++.+ .+|+.+ .|+.. |+++ +|++
T Consensus 109 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~~~~i~~l~~~~~~li~D~a~~~~~~~ 182 (382)
T 4hvk_A 109 QKQGFEVEYIPVGKYGEVDVSFIDQKLRDDT------ILVSVQHANNEIGTIQPVEEISEVLAGKAALHIDATASVGQIE 182 (382)
T ss_dssp HHTTCEEEEECBCTTSCBCHHHHHHHCCTTE------EEEECCSBCTTTCBBCCHHHHHHHHSSSSEEEEECTTTBTTBC
T ss_pred HhcCCEEEEeccCCCCCcCHHHHHHHhccCc------eEEEEECCCCCceeeCCHHHHHHHHHHcCEEEEEhHHhcCCCC
Confidence 58899999999999999999999997532 233222 34443 3332 3331
Q ss_pred -----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCccccccc-ccchHHHHHHHH
Q psy852 580 -----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRR-FRSLKLWFVIRT 653 (891)
Q Consensus 580 -----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr-~~aL~lW~~L~~ 653 (891)
..+|.+++++||++ +|.|+|+++++++..+.+.+ ...... ..... ++-. .....+..+++
T Consensus 183 ~~~~~~~~d~~~~s~~K~~-g~~g~g~~~~~~~~~~~~~~------~~~~~~--~~~~~----~~~~~~~~~~~~~al~- 248 (382)
T 4hvk_A 183 VDVEKIGADMLTISSNDIY-GPKGVGALWIRKEAKLQPVI------LGGGQE--NGLRS----GSENVPSIVGFGKAAE- 248 (382)
T ss_dssp CCHHHHTCSEEEEESGGGT-SCTTCEEEEEETTCCCCCSS------CSSCTG--GGTSC----SCCCHHHHHHHHHHHH-
T ss_pred CCchhcCCCEEEEeHHHhc-CCCceEEEEEcCccCcCccc------ccCCCc--Ccccc----CCcCHHHHHHHHHHHH-
Confidence 13699999999975 58899999999875332211 100000 00000 0101 11223333444
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc---eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 654 YGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR---LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 654 lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~---~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
+..+++++..++..++++++.+.|++++++++..++. .++++|++.+. ....+.+.|.+.|+.+..+..+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~~ 321 (382)
T 4hvk_A 249 ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLSLDMAGIQASTGSAC 321 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC-------CHHHHHHHHHHTTCBCBCC---
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC-------CHHHHHHHHHHCCEEEeeCCcc
Confidence 3346888999999999999999999999999876543 36899998643 3567888898899875433211
Q ss_pred cC-------------------CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 EQ-------------------NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 ~g-------------------~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.. ...+ ++++..+|++|++++++.|+++..
T Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~ 371 (382)
T 4hvk_A 322 SSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIE 371 (382)
T ss_dssp -----CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 10 3456 999999999999999999998874
No 375
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=98.13 E-value=1.2e-05 Score=92.73 Aligned_cols=213 Identities=12% Similarity=0.045 Sum_probs=117.9
Q ss_pred EEEecccchHHHHHHH----HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------h
Q psy852 508 MAYCSKEAHSCVEKAA----MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------C 572 (891)
Q Consensus 508 vI~~S~~aH~Sv~Kaa----~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c 572 (891)
.|+++...|.+...++ ...|++++.+|.+ |+++|+++|++.+ ..++++.. .|... |
T Consensus 173 ~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-----d~~~l~~~i~~~t----k~v~l~~p~NptG~v~~l~~i~~la 243 (464)
T 1ibj_A 173 EIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-----KLDEVAAAIGPQT----KLVWLESPTNPRQQISDIRKISEMA 243 (464)
T ss_dssp EEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-----SHHHHHHHCCSSE----EEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred EEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHHhccCc----eEEEEeCCCCCCCEeecHHHHHHHH
Confidence 4777778888876643 4568899999875 8999999986432 12222221 34433 4
Q ss_pred hhh-----h-----cCC------CCccEEEEcCcccCCccccc--EEEEEeCCccchhhhccCCCccccCCCCCccccCC
Q psy852 573 YRK-----S-----QGI------EYADSFNVNVNKWLLTAFDS--SCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHW 634 (891)
Q Consensus 573 ~~~-----l-----dGi------~~aDSIs~d~HK~L~~P~g~--G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ 634 (891)
+++ + .|. -.+|.+..++||++++|.|+ |+++.+++.... .+.....+ .+.
T Consensus 244 ~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~-~l~~~~~~-----------~g~ 311 (464)
T 1ibj_A 244 HAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAK-EVYFLQNS-----------EGS 311 (464)
T ss_dssp HTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHH-HHHHHHHH-----------TTC
T ss_pred HHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHH-HHHHHHHh-----------cCC
Confidence 331 1 221 24799999999999999876 999887643222 11100000 000
Q ss_pred cccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH--------------hccCCCcEEeCCC---ceeEEEEE
Q psy852 635 GIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGK--------------VRRDPRFEISNDV---RLGLVCFR 697 (891)
Q Consensus 635 ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~--------------L~~~~~~eil~~~---~~~iV~Fr 697 (891)
+ ...+.+|+.++.+ +.+...+++..++++.+.+. |+++|++++..+. ..++++|.
T Consensus 312 ~------~~~~~~~a~~~al--~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~ 383 (464)
T 1ibj_A 312 G------LAPFDCWLCLRGI--KTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFI 383 (464)
T ss_dssp B------CCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEE
T ss_pred C------CCHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEE
Confidence 1 1234556655543 23333333333333333333 3344555555432 24799999
Q ss_pred ecCCcchhhhhhHHHHHHHHHhCCcEEEeec-----------cc------------cCCeEE-EEecCCCCHHHHHHHHH
Q psy852 698 LRSENNLIADQNNRKLLEDINASGRLHMVPA-----------SQ------------EQNDEV-FELQERKRKDDLAYKRS 753 (891)
Q Consensus 698 ~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s-----------~~------------~g~~~l-~sv~~~tT~edId~li~ 753 (891)
+.+ ......+.+.|...|+.+..+. .. .+...+ ++++. ||++++++
T Consensus 384 l~~------~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~ 453 (464)
T 1ibj_A 384 TGS------VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLIS 453 (464)
T ss_dssp CSC------HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHH
T ss_pred ECC------HHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHH
Confidence 842 1123456777665554432221 00 112456 88875 89999999
Q ss_pred HHHHHH
Q psy852 754 FFVRML 759 (891)
Q Consensus 754 ~L~ei~ 759 (891)
.|++..
T Consensus 454 ~L~~al 459 (464)
T 1ibj_A 454 DLDIAF 459 (464)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998775
No 376
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.13 E-value=0.00035 Score=79.66 Aligned_cols=281 Identities=14% Similarity=0.055 Sum_probs=144.6
Q ss_pred HHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 445 HCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
..++++++.+.+..... +++ +++||+|+|..++.++|.....+. ......+|.....-|-...-+..
T Consensus 97 ~~~la~~l~~~~~~~~~-~v~--~~~gGseA~~~al~~~~~~~~~~g----------~~~~~~vi~~~~~yhg~~~~~~~ 163 (460)
T 3gju_A 97 SITLAKMIIDRAPKGMS-RVY--FGLSGSDANETNIKLIWYYNNVLG----------RPEKKKIISRWRGYHGSGVMTGS 163 (460)
T ss_dssp HHHHHHHHHHHSCTTEE-EEE--EESSHHHHHHHHHHHHHHHHHHTT----------CTTCCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHhhCCCCcC-EEE--EeCchHHHHHHHHHHHHHHHHhcC----------CCCCCEEEEECCCcCCCCHHHhh
Confidence 34566666666432222 455 788999999999999987653221 11123445555555654444433
Q ss_pred HcC------------ceEEEecCCC-----CCCcC--------HHHHHHHHHhhhhcCCccEEEEe----cCCccc----
Q psy852 525 MAF------------VRLKILEPDD-----KNSLR--------GATLRQVMQQDETMGYIPFFVST----TLGTTS---- 571 (891)
Q Consensus 525 l~g------------v~v~~Vp~d~-----~G~mD--------~~~Le~aI~~d~~~g~ip~~Vva----taGTT~---- 571 (891)
+.+ ..+..+|... +..++ +++|+++|++... ..+-++++. +.|...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~-~~~aaii~ep~~~~~G~~~~~~~ 242 (460)
T 3gju_A 164 LTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGP-ETIAAFIGEPILGTGGIVPPPAG 242 (460)
T ss_dssp HCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCG-GGEEEEEECSSBSTTTSBCCCTT
T ss_pred ccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCC-CCEEEEEECCccCCCCCccCCHH
Confidence 322 1355555321 22233 5888888875211 112222222 223222
Q ss_pred --------hhhh-----hc----CC-------------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccC---
Q psy852 572 --------CYRK-----SQ----GI-------------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVD--- 617 (891)
Q Consensus 572 --------c~~~-----ld----Gi-------------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~--- 617 (891)
|.+| +| |+ -..|-++++ |.++.. ...|+++.+++ +.+.+...
T Consensus 243 ~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~l~gG~~~lg~v~~~~~--i~~~~~~~~~~ 318 (460)
T 3gju_A 243 YWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIA--KGLTSAYAPLSGVIVADR--VWQVLVQGSDK 318 (460)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTTTSSCCEEEEEEHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeee--hhhcCCCCCeEEEEECHH--HHHHHhccccc
Confidence 4331 11 11 124777765 998776 57898888754 22222110
Q ss_pred CCccccCCCCCccccCCcccccccccchHHHH---HHHHHHHhhHHHHHHHH-HHHHHHHHHHhccCCCcEEeCCCceeE
Q psy852 618 PLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWF---VIRTYGLSGLQKYIRRH-CELAKLFEGKVRRDPRFEISNDVRLGL 693 (891)
Q Consensus 618 ~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~---~L~~lG~~G~~~~i~~~-~~lA~~L~~~L~~~~~~eil~~~~~~i 693 (891)
...+.+. .+. ....+.+.+ +|+.+..+.+.+.+++. ..+.+.|.+.+++.+.+..+. +...+
T Consensus 319 ~~~~~~~---------~t~----~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~g~~ 384 (460)
T 3gju_A 319 LGSLGHG---------WTY----SAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVR-GDGML 384 (460)
T ss_dssp HCSCSCC---------CTT----TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEE-EETTE
T ss_pred ccccccC---------CCC----CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe-eeeEE
Confidence 0000100 011 112233333 34433344433333322 333444445555555544332 23346
Q ss_pred EEEEecCCcch-----hhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 694 VCFRLRSENNL-----IADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 694 V~Fr~~~~~~~-----~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+.|.+.+.... ........+.+.|.++|+++.... ....+ +++....|+++|+++++.|++++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 454 (460)
T 3gju_A 385 AAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAPPLCLTREQADIVVSKTADAVK 454 (460)
T ss_dssp EEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 66776532110 012346688899999998743322 33556 988888999999999999998875
No 377
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=98.12 E-value=0.00015 Score=82.44 Aligned_cols=280 Identities=10% Similarity=0.029 Sum_probs=134.7
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++++.+.+..... +++ +++||+|+|..++.++|..+.... ...++-+|+....-|-+..-+..+
T Consensus 90 ~~la~~l~~~~~~~~~-~v~--~~~sGseA~~~al~~~~~~~~~~G----------~~~~~~vi~~~~~yhg~~~~~~~~ 156 (448)
T 3dod_A 90 TQLAETLIDISPKKLT-RVF--YSDSGAEAMEIALKMAFQYWKNIG----------KPEKQKFIAMKNGYHGDTIGAVSV 156 (448)
T ss_dssp HHHHHHHHHHSCTTEE-EEE--EESSHHHHHHHHHHHHHHHHHHTT----------CTTCCEEEEEC-------------
T ss_pred HHHHHHHHHhCCCCCC-EEE--EeCchHHHHHHHHHHHHHHHHhhC----------CCCCCEEEEECCCCCCccHHHHHh
Confidence 3556666666532112 455 788999999999999997643221 011233444444445444333322
Q ss_pred cC------------ceEEEecCCCCCCc-----------CHHHHHHHHHhhhhcCCccEEE-EecC-Ccc---c------
Q psy852 526 AF------------VRLKILEPDDKNSL-----------RGATLRQVMQQDETMGYIPFFV-STTL-GTT---S------ 571 (891)
Q Consensus 526 ~g------------v~v~~Vp~d~~G~m-----------D~~~Le~aI~~d~~~g~ip~~V-vata-GTT---~------ 571 (891)
.+ ..+..+|.+...+. |+++|+++|++... .+-+++ .... +.+ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~--~~a~vi~ep~~~~~~G~~~~~~~~l 234 (448)
T 3dod_A 157 GSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHE--EIAALSIESMVQGASGMIVMPEGYL 234 (448)
T ss_dssp ----------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGG--GEEEEEEESSEESTTTCEECCTTHH
T ss_pred cCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCC--CEEEEEEeCcccCCCCeecCCHHHH
Confidence 22 23455666554444 58999999983211 122222 2222 322 1
Q ss_pred ------hhhh-----hc---------CC--------CCccEEEEcCcccCCccc-ccEEEEEeCCccchhhhccCCCccc
Q psy852 572 ------CYRK-----SQ---------GI--------EYADSFNVNVNKWLLTAF-DSSCLWVADRYKLTSALVVDPLYLQ 622 (891)
Q Consensus 572 ------c~~~-----ld---------Gi--------~~aDSIs~d~HK~L~~P~-g~G~llvR~~~~L~~~l~~~~~Yl~ 622 (891)
|.+| +| |- -..|.++++ |.++..+ ++|+++.+++ +.+.+... +-.
T Consensus 235 ~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~s--K~l~~G~~~ig~v~~~~~--~~~~~~~~--~~~ 308 (448)
T 3dod_A 235 AGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAG--KGITGGYLPIAVTFATED--IYKAFYDD--YEN 308 (448)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSCCEEEEEEHH--HHHTTCSC--GGG
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEec--ccccCCcCceEEEEECHH--HHHHhhhc--ccc
Confidence 4331 11 10 114777765 9887763 7888888654 22222110 000
Q ss_pred cCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc---CCCcEEeCCCceeEEEEEec
Q psy852 623 HGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR---DPRFEISNDVRLGLVCFRLR 699 (891)
Q Consensus 623 ~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~---~~~~eil~~~~~~iV~Fr~~ 699 (891)
.. .. ....+... -++.....-.+|+.+..++ .+++..++.+++.+.|++ .+.+..+ +....++.+.+.
T Consensus 309 ~~---~~-~~~~t~~~-~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~~g~~~~~~~~ 379 (448)
T 3dod_A 309 LK---TF-FHGHSYTG-NQLGCAVALENLALFESEN---IVEQVAEKSKKLHFLLQDLHALPHVGDI-RQLGFMCGAELV 379 (448)
T ss_dssp CC---CC-CCCCTTTT-CHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEEC
T ss_pred CC---cc-cccCCCCc-CHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-EeeeEEEEEEEc
Confidence 00 00 00011111 1111222223333333333 344445555555555543 3333222 122346677775
Q ss_pred CCcch--hh---hhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 700 SENNL--IA---DQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 700 ~~~~~--~~---d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..... .. ......+.+.|.++|+++. +. + ..+ ++++...|+++|+++++.|++.+.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~~---~-~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 441 (448)
T 3dod_A 380 RSKETKEPYPADRRIGYKVSLKMRELGMLTR-PL---G-DVIAFLPPLASTAEELSEMVAIMKQAIH 441 (448)
T ss_dssp SBTTTTBCCCGGGCHHHHHHHHHHHTTEECC-EE---T-TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhHHHHHHHHHHHHCCcEEe-cc---C-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 32100 00 0114678888999997742 22 3 456 888888999999999999998874
No 378
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=98.12 E-value=7.5e-05 Score=87.33 Aligned_cols=164 Identities=10% Similarity=0.043 Sum_probs=106.1
Q ss_pred CHHHHHHHHHHHhcCCCCCccc-cChhHHHHHHHHHHHHHHHcC--CCCCCCCCCCCCCCCCCCCCccccccccCCCCCC
Q psy852 29 SYPSVLADMLSDAIGCIGFSWA-ASPSCTELETIVLDWLGKAIG--LPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQ 105 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~~E~~~~~~l~~l~g--~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~ 105 (891)
..|.++..+...+.+. .|. ......++++.+.+++++..| .+... |+.+
T Consensus 116 ~~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~------------~~~i------------- 167 (533)
T 3f6t_A 116 NRDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAE------------QTDL------------- 167 (533)
T ss_dssp CHHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG------------GEEE-------------
T ss_pred CCcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC------------cceE-------------
Confidence 3566666666665532 222 233456888888888876633 33210 0011
Q ss_pred CCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCCeEEEEecC----CCCcccHHH
Q psy852 106 PQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD----DKNSLRGAT 181 (891)
Q Consensus 106 ~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d----~~g~id~~~ 181 (891)
.+|+||+...++....+..... ..+...|+++.-+|.+...++...+.+++.++++ .++.+|+++
T Consensus 168 -~~t~G~t~al~~~~~~l~~~~l----------~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~ 236 (533)
T 3f6t_A 168 -FPTEGGTAAIVYAFHSLAENHL----------LKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNE 236 (533)
T ss_dssp -EEEEHHHHHHHHHHHHHHHTTS----------SCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHH
T ss_pred -EEECCHHHHHHHHHHHhhhhhc----------cCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHH
Confidence 1356775433222222211110 1122358888999999988777777788888885 468899999
Q ss_pred HHHHHHhhhhcCCcceEEEeecccCccccccCHH---HHHHHHH-HcCCceeeeccccCC
Q psy852 182 LRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLA---EIGPVAK-EFDVWLHVDGAYAGS 237 (891)
Q Consensus 182 L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~---~I~~i~~-~~~~~lHvDaA~GG~ 237 (891)
|++.+++. +.+|+++..+|.+|.+-|.+ +|+++|+ ++++++++|.+|+++
T Consensus 237 l~~~l~~~------~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~ 290 (533)
T 3f6t_A 237 IEKLKDPS------IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAF 290 (533)
T ss_dssp HHHHSCTT------EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGG
T ss_pred HHHHhCCC------CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcccc
Confidence 99988643 34677778899999997777 7778888 689999999999653
No 379
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.09 E-value=7.4e-05 Score=81.05 Aligned_cols=222 Identities=13% Similarity=0.096 Sum_probs=137.3
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+. . -.|++. -+|.+....+...|.+++.+|.++++.+|
T Consensus 78 ~v~--~~~G~~~al~~~~~~~-----g-----------------d~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d 132 (335)
T 1uu1_A 78 NVS--VGNGADEIIYVMMLMF-----D-----------------RSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIP 132 (335)
T ss_dssp GEE--EESSHHHHHHHHHHHS-----S-----------------EEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCC
T ss_pred HEE--EcCChHHHHHHHHHHh-----C-----------------CcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCC
Confidence 455 7889999998887664 1 136677 78888888888888899999998778888
Q ss_pred HHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhh--h--hc---------C-C-----CCccEEEEcCccc
Q psy852 543 GATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYR--K--SQ---------G-I-----EYADSFNVNVNKW 592 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~--~--ld---------G-i-----~~aDSIs~d~HK~ 592 (891)
+++| +. ...++++. ..|+.. |.. . +| . + ...+-+..+.||+
T Consensus 133 ~~~l-----~~----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 203 (335)
T 1uu1_A 133 EVNV-----GE----GDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKA 203 (335)
T ss_dssp CCCC-----CT----TEEEEEESSCTTTCCCCCHHHHHHHHHTTCEEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTT
T ss_pred HHHc-----CC----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCEEEEECcchhhcchhHHHHhhhCCCEEEEecchhh
Confidence 8777 11 11222222 244443 110 0 01 0 1 1235677899999
Q ss_pred CCcc-cccEEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH-hhHHHHHHHHHHH
Q psy852 593 LLTA-FDSSCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL-SGLQKYIRRHCEL 669 (891)
Q Consensus 593 L~~P-~g~G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~-~G~~~~i~~~~~l 669 (891)
++.| ..+|+++.++ +.+ +.+. .... ++ ...+.++++...+.. +.+++..++..++
T Consensus 204 ~g~~G~r~G~~~~~~-~~~-~~l~~~~~~--------------~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 261 (335)
T 1uu1_A 204 FSLAAQRVGYVVASE-KFI-DAYNRVRLP--------------FN------VSYVSQMFAKVALDHREIFEERTKFIVEE 261 (335)
T ss_dssp TTCGGGCCEEEEECH-HHH-HHHHHHSCT--------------TC------SCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCcccCeEEEEeCH-HHH-HHHHHhcCC--------------CC------cCHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 8744 4589998843 322 2221 1110 11 112333344333332 3577778888899
Q ss_pred HHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHH
Q psy852 670 AKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDL 748 (891)
Q Consensus 670 A~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edI 748 (891)
++++.+.|++. ++++. ++..+.+.+++++ ....++.+.|.+.|+.+.. ....+ ++++ +.+|+
T Consensus 262 ~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-------~~~~~~~~~l~~~gi~v~~-----~~~~iRis~~---~~~~i 324 (335)
T 1uu1_A 262 RERMKSALREM-GYRIT-DSRGNFVFVFMEK-------EEKERLLEHLRTKNVAVRS-----FREGVRITIG---KREEN 324 (335)
T ss_dssp HHHHHHHHHHH-TCCBC-CCCSSEEEEECCT-------HHHHHHHHHHHHHTEEEEE-----ETTEEEEECC---CHHHH
T ss_pred HHHHHHHHHHC-CcEEc-CCCCeEEEEECCC-------CCHHHHHHHHHHCCEEEEE-----CCCeEEEEeC---CHHHH
Confidence 99999999886 56653 4455677787742 1345788888888987443 23456 8874 46889
Q ss_pred HHHHHHHHH
Q psy852 749 AYKRSFFVR 757 (891)
Q Consensus 749 d~li~~L~e 757 (891)
+++++.|++
T Consensus 325 ~~~~~~l~~ 333 (335)
T 1uu1_A 325 DMILRELEV 333 (335)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999988875
No 380
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.08 E-value=0.00012 Score=83.84 Aligned_cols=268 Identities=14% Similarity=0.005 Sum_probs=145.4
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMM 525 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l 525 (891)
.++++.+++.+..... +++ +++||+|+|..++..+|..+..+.. ....-+|.....-|-...-+..+
T Consensus 121 ~~L~e~la~~~~~~~~-~v~--~~~sGseA~~~Alk~a~~~~~~~g~----------~g~~~ii~~~~~yhg~~~~~~~~ 187 (457)
T 3tfu_A 121 ARLAKLLVDITPAGLD-TVF--FSDSGSVSVEVAAKMALQYWRGRGL----------PGKRRLMTWRGGYHGDTFLAMSI 187 (457)
T ss_dssp HHHHHHHHHHSSTTEE-EEE--EESSHHHHHHHHHHHHHHHHHHTTC----------TTCCEEEEETTCCCCSSHHHHTT
T ss_pred HHHHHHHHHhCCCCcC-EEE--EeCcHHHHHHHHHHHHHHHHHhcCC----------CCCceEEEEcCCcCCccHHhhcc
Confidence 4666677766642222 455 7889999999999999986643311 11223444444444433222222
Q ss_pred ---------------cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE-----ecCCccc------------hh
Q psy852 526 ---------------AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS-----TTLGTTS------------CY 573 (891)
Q Consensus 526 ---------------~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv-----ataGTT~------------c~ 573 (891)
.++....+|.+..+..|+++|+++|++... .+-++++ +..|... |.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~--~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~ 265 (457)
T 3tfu_A 188 CDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG--ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICR 265 (457)
T ss_dssp SCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG--GEEEEEECSSEECTTTCEECCTHHHHHHHHHHH
T ss_pred cCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC--CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHH
Confidence 122333344444445789999999985311 1222222 2234332 43
Q ss_pred hh-----hcC----C-------------CCccEEEEcCcccCCccc-ccEEEEEeCCccchhhhcc-CCCccccCCCCCc
Q psy852 574 RK-----SQG----I-------------EYADSFNVNVNKWLLTAF-DSSCLWVADRYKLTSALVV-DPLYLQHGHEGAI 629 (891)
Q Consensus 574 ~~-----ldG----i-------------~~aDSIs~d~HK~L~~P~-g~G~llvR~~~~L~~~l~~-~~~Yl~~~~e~~~ 629 (891)
++ +|. + -..|-++++ |.+++.+ +.|+++.+++ +.+.+.. .+.-+.+
T Consensus 266 ~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~s--K~l~gG~~~lG~v~~~~~--i~~~~~~~~~~~~~~------ 335 (457)
T 3tfu_A 266 RYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVG--KALTGGYLSLAATLCTAD--VAHTISAGAAGALMH------ 335 (457)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--GGGGTTSSCCEEEEEEHH--HHHHHHHSSSCSCCC------
T ss_pred HcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEC--hhhhCCCcceEEEEEcHH--HHHHhhccCCCceeE------
Confidence 31 111 1 125777664 8887763 7899988765 2222221 1110000
Q ss_pred cccCCcccccccccchHHHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHhccC---CCcEEeCCCceeEEEEEecCCcc
Q psy852 630 DYRHWGIPLSRRFRSLKLWFV---IRTYGLSGLQKYIRRHCELAKLFEGKVRRD---PRFEISNDVRLGLVCFRLRSENN 703 (891)
Q Consensus 630 ~~~~~ti~~SRr~~aL~lW~~---L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~---~~~eil~~~~~~iV~Fr~~~~~~ 703 (891)
..+. ....+.+.+. |+.+..+ +..++..++.+++.+.|+++ +.+..+. ...+++.|.+...
T Consensus 336 ---~~t~----~~n~~a~aaa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr-~~G~~~~i~l~~~-- 402 (457)
T 3tfu_A 336 ---GPTF----MANPLACAVSVASVELLLGQ---DWRTRITELAAGLTAGLDTARALPAVTDVR-VCGAIGVIECDRP-- 402 (457)
T ss_dssp ---CCTT----TTCHHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHGGGGGSTTEEEEE-ECSSCEEEEESSC--
T ss_pred ---ecCC----CcCHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhcCCCeeeee-cCCeEEEEEECCc--
Confidence 0111 1122333333 3333333 34556667777888877764 3333221 2334667777532
Q ss_pred hhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 704 LIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 704 ~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
....++.+.|.++|+++ .+ .+ ..+ +++...+|++||+++++.|++++.
T Consensus 403 ----~~~~~~~~~l~~~Gv~v-~~---~~-~~lRi~p~~~~t~eei~~~l~~L~~~l~ 451 (457)
T 3tfu_A 403 ----VDLAVATPAALDRGVWL-RP---FR-NLVYAMPPYICTPAEITQITSAMVEVAR 451 (457)
T ss_dssp ----CCHHHHHHHHHHTTEEC-CC---BT-TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHCCeEE-Ee---cC-CEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 12567888999999773 22 12 356 888888899999999999998874
No 381
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.08 E-value=0.0002 Score=82.47 Aligned_cols=281 Identities=10% Similarity=0.027 Sum_probs=143.8
Q ss_pred HHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 445 HCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
..++++++.+.+..... +++ ++.||+|+|..++.++|..+..+.. ....-+|.....-|-...-+..
T Consensus 99 ~~~la~~l~~~~~~~~~-~v~--~~~sGseA~~~Aik~a~~~~~~~g~----------~~~~~vi~~~~~yHg~~~~~~~ 165 (476)
T 3i5t_A 99 AARLAEKIATLTPGDLN-RIF--FTTGGSTAVDSALRFSEFYNNVLGR----------PQKKRIIVRYDGYHGSTALTAA 165 (476)
T ss_dssp HHHHHHHHHTTSSTTCC-EEE--EESSHHHHHHHHHHHHHHHHHHTTC----------TTCCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHhcCCCCcC-EEE--EeCchHHHHHHHHHHHHHHHHhcCC----------CCCCEEEEEcCCcCcCChhhcc
Confidence 34566666666532122 455 7889999999999999987643311 1123345555555644433333
Q ss_pred HcC------------ceEEEecCCC--CC-CcC--------HHHHHHHHHhhhhcCCccEEEE-ec---CCccc------
Q psy852 525 MAF------------VRLKILEPDD--KN-SLR--------GATLRQVMQQDETMGYIPFFVS-TT---LGTTS------ 571 (891)
Q Consensus 525 l~g------------v~v~~Vp~d~--~G-~mD--------~~~Le~aI~~d~~~g~ip~~Vv-at---aGTT~------ 571 (891)
+.+ ..+..++... .+ ..| +++|+++|++... ..+-++++ .. .|...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~-~~~aavi~ep~~~~~G~~~~~~~~L 244 (476)
T 3i5t_A 166 CTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP-DTIAAFLAEPILASGGVIIPPAGYH 244 (476)
T ss_dssp TCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG-GGEEEEEECSSBTTTTSBCCCTTHH
T ss_pred ccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC-CCEEEEEECCccCCCCcccCCHHHH
Confidence 222 1233444211 11 122 6788888864211 11222222 22 22211
Q ss_pred ------hhhh------------------------hcCCCCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCC--
Q psy852 572 ------CYRK------------------------SQGIEYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDP-- 618 (891)
Q Consensus 572 ------c~~~------------------------ldGi~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~-- 618 (891)
|.++ ..|+ ..|.++++ |.+++. .+.|+++.+++ +.+.+....
T Consensus 245 ~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~~--i~~~~~~~~~~ 319 (476)
T 3i5t_A 245 ARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGGLAISEA--VLARISGENAK 319 (476)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECHH--HHHTTSGGGCT
T ss_pred HHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEEEEECHH--HHHHHhcCCcc
Confidence 3321 1122 24777765 988876 67788888654 222221110
Q ss_pred -CccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEE
Q psy852 619 -LYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLV 694 (891)
Q Consensus 619 -~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV 694 (891)
..+.+ ..+.. .-++.......+|+.+..+ +.+++..++.+++.+.|+.+. .+..+ +..-.++
T Consensus 320 ~~~~~~---------~~t~~-~np~a~aAa~aaL~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~~~G~~~ 385 (476)
T 3i5t_A 320 GSWFTN---------GYTYS-NQPVACAAALANIELMERE---GIVDQAREMADYFAAALASLRDLPGVAET-RSVGLVG 385 (476)
T ss_dssp TCEECC---------CCTTT-TCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEETTEE
T ss_pred cccccc---------cCCCC-cCHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCcee
Confidence 00000 01111 1112222223334433333 345566667777777776543 33222 1233466
Q ss_pred EEEecCCcc--hh---hhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHHHHH
Q psy852 695 CFRLRSENN--LI---ADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLGLVC 763 (891)
Q Consensus 695 ~Fr~~~~~~--~~---~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~~~~ 763 (891)
.|.+..... .. .......+.+.|.++|+++.. .+ ..+ +++...+|+++|+++++.|++.+..+.
T Consensus 386 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~----~g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~ 455 (476)
T 3i5t_A 386 CVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRP----LG-DLCVISPPLIISRAQIDEMVAIMRQAITEVS 455 (476)
T ss_dssp EEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEE----ET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCccccccccchhHHHHHHHHHHHHCCCEEEe----cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 677653210 00 112456788889999977433 13 456 888888999999999999999875443
No 382
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=98.07 E-value=0.00014 Score=81.80 Aligned_cols=276 Identities=11% Similarity=0.019 Sum_probs=146.2
Q ss_pred HHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 445 HCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
..++++.+++.+...+. +|+ +++||+|++..++..+|... . ++-+|+....-|.+..-+..
T Consensus 87 ~~~l~~~la~~~~~~~~-~v~--~~~gg~ea~~~a~~~~~~~~-~---------------~~~vi~~~~~yhg~~~~~~~ 147 (433)
T 1zod_A 87 VVDLATRLANITPPGLD-RAL--LLSTGAESNEAAIRMAKLVT-G---------------KYEIVGFAQSWHGMTGAAAS 147 (433)
T ss_dssp HHHHHHHHHHHSCTTCC-EEE--EESCHHHHHHHHHHHHHHHH-T---------------CCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHHhCCCCcC-EEE--EeCchHHHHHHHHHHHHHhh-C---------------CCeEEEECCCcCCCChhHHh
Confidence 34566666666643232 455 78899999999998877421 0 12245555566655544443
Q ss_pred Hc-----------CceEEEecCCC------------CCCcCHHHHHHHHHhhhhcCCccEEEE----ecCCccc------
Q psy852 525 MA-----------FVRLKILEPDD------------KNSLRGATLRQVMQQDETMGYIPFFVS----TTLGTTS------ 571 (891)
Q Consensus 525 l~-----------gv~v~~Vp~d~------------~G~mD~~~Le~aI~~d~~~g~ip~~Vv----ataGTT~------ 571 (891)
+. ...++.++++. .+.+|+++|+++|++... ..+.++++ +..|+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~~vi~~p~~~~~G~~~~~~~~l 226 (433)
T 1zod_A 148 ATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSS-GNLAAFIAEPILSSGGIIELPDGYM 226 (433)
T ss_dssp TCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCC-SCEEEEEECSEETTTTCEECCTTHH
T ss_pred hcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCC-CCeEEEEEccccCCCCcccCCHHHH
Confidence 21 11345555422 123579999999975210 12223333 2245432
Q ss_pred ------hhhh-----hc---------CC--------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCcccc
Q psy852 572 ------CYRK-----SQ---------GI--------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQH 623 (891)
Q Consensus 572 ------c~~~-----ld---------Gi--------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~ 623 (891)
|.++ +| |- ...|.++++ |+++..+++|+++.+++ +.+.+... .+..
T Consensus 227 ~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~s--K~~~~G~~ig~~~~~~~--~~~~~~~~-~~~~- 300 (433)
T 1zod_A 227 AALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLS--KTLGAGLPLAAIVTSAA--IEERAHEL-GYLF- 300 (433)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--HHHHTTSSCEEEEECHH--HHHHHHHT-TCCC-
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEec--ccccCCCCeeEEEEhHH--HHHhhccC-CCCC-
Confidence 4331 11 10 124666655 98887788999998763 22222211 0100
Q ss_pred CCCCCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC----CCcEEeCCCceeEEEEEec
Q psy852 624 GHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD----PRFEISNDVRLGLVCFRLR 699 (891)
Q Consensus 624 ~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~----~~~eil~~~~~~iV~Fr~~ 699 (891)
..+... -++.....-.+++.+..++ ..++..++++++.++|+++ +.+... ++..+++.|.+.
T Consensus 301 ---------~~t~~~-~~~~~~a~~aal~~~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~i~~~ 366 (433)
T 1zod_A 301 ---------YTTHVS-DPLPAAVGLRVLDVVQRDG---LVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGLLLGVEIV 366 (433)
T ss_dssp ---------CCTTTT-CHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEE
T ss_pred ---------CCCCCc-CHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEe
Confidence 011111 1111122223444333333 4455666777777777653 433322 233456677764
Q ss_pred CCcch--hhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 700 SENNL--IADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 700 ~~~~~--~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+.... .-.....++.+.|.+.|+++..+........+ ++++..+|+++|+++++.|++++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~ 430 (433)
T 1zod_A 367 KDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIE 430 (433)
T ss_dssp EETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred cCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 31000 00123567888888899874433322222566 888888999999999999988763
No 383
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=98.06 E-value=0.00032 Score=81.22 Aligned_cols=261 Identities=10% Similarity=-0.019 Sum_probs=149.5
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCC--CC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDK--NS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~--G~ 540 (891)
+|+ +++|+++++..++.+... .| ..++-.|+++.-.|.+...++.+.|.+++.+|.+++ ..
T Consensus 155 ~i~--~t~G~~~ai~~~~~~l~~--------------~g-d~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~ 217 (498)
T 3ihj_A 155 NIY--LTTGASDGISTILKILVS--------------GG-GKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWA 217 (498)
T ss_dssp GEE--EESSHHHHHHHHHHHHCC--------------CC-GGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTB
T ss_pred cEE--EcCCHHHHHHHHHHHHcC--------------CC-CCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCC
Confidence 566 688999998877764311 00 001236888888999999999999999999998765 48
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEEec----CCccc-----------hhhh-----hc---------CC-C----------
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVSTT----LGTTS-----------CYRK-----SQ---------GI-E---------- 580 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vvat----aGTT~-----------c~~~-----ld---------Gi-~---------- 580 (891)
+|+++|+++|++.......-++++.+ .|++. |.++ .| +- .
T Consensus 218 ~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~ 297 (498)
T 3ihj_A 218 LNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYE 297 (498)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHH
T ss_pred CCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHH
Confidence 99999999998753221122233223 45443 3321 11 10 0
Q ss_pred -------CccEEEE-cCcccCC--cccccEEEEE--eCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHH
Q psy852 581 -------YADSFNV-NVNKWLL--TAFDSSCLWV--ADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLW 648 (891)
Q Consensus 581 -------~aDSIs~-d~HK~L~--~P~g~G~llv--R~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW 648 (891)
.+..|++ +++|.+. .-.-.|++++ .++............++ ....+.++
T Consensus 298 ~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~-------------------~~~~~~q~ 358 (498)
T 3ihj_A 298 MGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRL-------------------CPPVSGQA 358 (498)
T ss_dssp TCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSC-------------------CCCHHHHH
T ss_pred hcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccC-------------------CCCHHHHH
Confidence 0113444 8999983 3355787775 34432221111100000 01122333
Q ss_pred HHHHHHH------------HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEE-EecCCcc-----hhhhhhH
Q psy852 649 FVIRTYG------------LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCF-RLRSENN-----LIADQNN 710 (891)
Q Consensus 649 ~~L~~lG------------~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~F-r~~~~~~-----~~~d~ln 710 (891)
+....+. .....++.++..++++++.+.|++++++++.. ++.++..| ++..... ...+...
T Consensus 359 a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-p~gg~~~~~~l~~p~~~~~~~~~~g~~~ 437 (498)
T 3ihj_A 359 AMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNP-LQGAMYAFPRIFIPAKAVEAAQAHQMAP 437 (498)
T ss_dssp HHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCC-CCBSSEECCEECCCHHHHHHHHHTTSCH
T ss_pred HHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecC-CCeEEEEEEeccCchhhhHHHHhcCCCc
Confidence 3333221 12234555677888999999999988988764 45554444 4431100 0001122
Q ss_pred HH--HHHHHHhCCcEEEeeccc---cCCeEE-EEecCCCCHHHHHHHHHHHHHHHHHH
Q psy852 711 RK--LLEDINASGRLHMVPASQ---EQNDEV-FELQERKRKDDLAYKRSFFVRMLGLV 762 (891)
Q Consensus 711 ~~--L~~~L~~~G~~~~s~s~~---~g~~~l-~sv~~~tT~edId~li~~L~ei~~~~ 762 (891)
.. +.+.|.+.|++++.++.. .+...+ +++. .++++++.+++.|.+....+
T Consensus 438 ~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~--~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 438 DMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL--PPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp HHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHH
Confidence 33 345566789886655543 234456 8874 68999999999999887533
No 384
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.06 E-value=0.00021 Score=79.78 Aligned_cols=92 Identities=14% Similarity=0.027 Sum_probs=74.7
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEec--CCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHH---HHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEP--DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLA---EIG 218 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~--d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~---~I~ 218 (891)
.|++..-+|.+....+...|.+++.++. ++++.+|+++|++.+++.. ..+.+++.+..+|.||.+-+.+ +|+
T Consensus 133 ~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~p~NPtG~~~~~~~l~~i~ 209 (409)
T 4eu1_A 133 RIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAP---EGSVILVHACAHNPTGVDPTHDDWRQVC 209 (409)
T ss_dssp EEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHHH
Confidence 4777888999998888888889999998 4568999999999997531 1245677677799999997755 599
Q ss_pred HHHHHcCCceeeeccccCCc
Q psy852 219 PVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG~~ 238 (891)
++|+++|+++++|.+|+++.
T Consensus 210 ~~~~~~~~~li~De~y~~~~ 229 (409)
T 4eu1_A 210 DVIKRRNHIPFVDMAYQGFA 229 (409)
T ss_dssp HHHHHTTCEEEEEESCTTTT
T ss_pred HHHHhCCcEEEEeccccccc
Confidence 99999999999999996643
No 385
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.05 E-value=1.3e-05 Score=87.79 Aligned_cols=277 Identities=15% Similarity=0.090 Sum_probs=179.6
Q ss_pred HHHHHHHHhhccCCc-cccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH--HHHHH
Q psy852 447 ELAKLFEGKVRRDPR-FEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAA 523 (891)
Q Consensus 447 elAr~l~~~L~~~~~-~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S--v~Kaa 523 (891)
++.+.+++.+...+. -+++ +++|+++++. ++... ..+.-.|+++...|++ +...+
T Consensus 39 ~~~~~la~~~~~~~~~~~v~--~~~g~t~al~-~~~~~-------------------~~~gd~vi~~~~~~~~~~~~~~~ 96 (384)
T 3zrp_A 39 YSLKGLRYVMGASKNYQPLI--IPGGGTSAME-SVTSL-------------------LKPNDKILVVSNGVFGDRWEQIF 96 (384)
T ss_dssp HHHHHHHHHHTCCTTSEEEE--EESCHHHHHH-HGGGG-------------------CCTTCEEEEECSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcEEE--EcCCcHHHHH-HHHhh-------------------cCCCCEEEEecCCcchHHHHHHH
Confidence 344455666654431 2455 6889999998 66432 1122357777778865 44555
Q ss_pred HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-----hcC---------
Q psy852 524 MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-----SQG--------- 578 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-----ldG--------- 578 (891)
...|.+++.+|.+.++.+|+++|+++|++.. ...++++ +..|+.. |+++ +|+
T Consensus 97 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~ 173 (384)
T 3zrp_A 97 KRYPVNVKVLRPSPGDYVKPGEVEEEVRKSE---YKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEV 173 (384)
T ss_dssp TTSSCEEEEECCSTTCCCCHHHHHHHHHHSC---EEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCC
T ss_pred HHcCCcEEEecCCCCCCCCHHHHHHHHHhCC---CcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccc
Confidence 6778999999999999999999999998731 1122222 2245544 4442 232
Q ss_pred -CC--CccEEEEcCcccCCcccccEEEEEeCCccchhhh-c---cCCCccccCCCCCccccC----Cccc-cccc-ccch
Q psy852 579 -IE--YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSAL-V---VDPLYLQHGHEGAIDYRH----WGIP-LSRR-FRSL 645 (891)
Q Consensus 579 -i~--~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l-~---~~~~Yl~~~~e~~~~~~~----~ti~-~SRr-~~aL 645 (891)
+. .+|.+++++|||+++|.|+|+++++++. + +.+ . ....|+...... ..... .... ++-. ...+
T Consensus 174 ~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~ 250 (384)
T 3zrp_A 174 KAEEWNVDVYLTASQKALGSAAGLGLLLLSPKA-L-SILDSQNSIAGYYLDLRNWL-PVMRGAEEGKAAYFATPPVHVIL 250 (384)
T ss_dssp CTTTTTCSEEEEETTSTTCCCSSEEEEEECHHH-H-HHHHHCCCSCCSTTCHHHHH-HHHHHHHTTCCCCSSCCCHHHHH
T ss_pred cccccCCCEEEecCcccccCCCceEEEEECHHH-H-HHhcCCCCCCcccccHHHHH-HHHHhhcccCCCcCCCCCHHHHH
Confidence 12 4799999999999999999999997652 2 112 1 001111000000 00000 0000 1111 2234
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC----ceeEEEEEecCCcchhhhhhHHHHHHHHHhCC
Q psy852 646 KLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV----RLGLVCFRLRSENNLIADQNNRKLLEDINASG 721 (891)
Q Consensus 646 ~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~----~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G 721 (891)
.++.+++.+...++++..++..++++++.+.|++. +++++.++ ..++++|++.+. ...++.+.|.++|
T Consensus 251 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~g 322 (384)
T 3zrp_A 251 QLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKVA-------DPQKVLAGTVNEG 322 (384)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSSS-------CHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCCC-------CHHHHHHHHHHCC
Confidence 56677787778889999999999999999999998 88877654 357888998642 4567889999999
Q ss_pred cEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 722 RLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 722 ~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+.+..+..... ..+ ++++..+|++||+++++.|+++..
T Consensus 323 i~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~ 361 (384)
T 3zrp_A 323 VEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLR 361 (384)
T ss_dssp CCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHH
Confidence 87553332222 556 998888999999999999998874
No 386
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.04 E-value=0.00011 Score=82.70 Aligned_cols=57 Identities=9% Similarity=-0.005 Sum_probs=47.9
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
|+++|++.+++.. ..+.+|++.-.++.+|.+.| +++|.++|++||++|++|.++.|+
T Consensus 188 d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~ 248 (434)
T 3l44_A 188 NVETLKEALDKWG---HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF 248 (434)
T ss_dssp CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT
T ss_pred cHHHHHHHHHhCC---CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce
Confidence 8999999997531 12467777777888899998 999999999999999999999775
No 387
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=98.04 E-value=2.3e-05 Score=85.93 Aligned_cols=282 Identities=8% Similarity=0.006 Sum_probs=182.6
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH--HHHHH
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAA 523 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S--v~Kaa 523 (891)
.++++++++.+...+.-.++ +++|+++++..++.+... +.-.|+++..+|++ ...++
T Consensus 56 ~~~~~~la~~~g~~~~~~v~--~~~g~t~a~~~~~~~l~~-------------------~gd~vl~~~~~~~~~~~~~~~ 114 (386)
T 2dr1_A 56 MDTVERLREFLEVEKGEVLL--VPSSGTGIMEASIRNGVS-------------------KGGKVLVTIIGAFGKRYKEVV 114 (386)
T ss_dssp HHHHHHHHHHHTCSSSEEEE--ESSCHHHHHHHHHHHHSC-------------------TTCEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcEEE--EeCChHHHHHHHHHHhhc-------------------CCCeEEEEcCCchhHHHHHHH
Confidence 34455666666543122355 688999999988876411 12257888888988 77777
Q ss_pred HHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh-----hcC---------
Q psy852 524 MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK-----SQG--------- 578 (891)
Q Consensus 524 ~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~-----ldG--------- 578 (891)
...|.+++.+|.+.++.+|+++|+++|++.. ....++++. ..|... |.++ +|+
T Consensus 115 ~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~--~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~ 192 (386)
T 2dr1_A 115 ESNGRKAVVLEYEPGKAVKPEDLDDALRKNP--DVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADI 192 (386)
T ss_dssp HHTTCEEEEEECCTTCCCCHHHHHHHHHHCT--TCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCC
T ss_pred HHhCCceEEEecCCCCCCCHHHHHHHHhcCC--CCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccc
Confidence 8889999999999999999999999997521 112223322 235443 4431 221
Q ss_pred -C--CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc---CCCccccCCCCCcccc-CCccccccc-ccchHHHHH
Q psy852 579 -I--EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV---DPLYLQHGHEGAIDYR-HWGIPLSRR-FRSLKLWFV 650 (891)
Q Consensus 579 -i--~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~---~~~Yl~~~~e~~~~~~-~~ti~~SRr-~~aL~lW~~ 650 (891)
+ ..+|.++.++||++++|.|+|+++++++ +.+.+.. ...|+.-... ..... .....++.. .....++.+
T Consensus 193 ~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~ 269 (386)
T 2dr1_A 193 KFDKWGLDVVFSSSQKAFGVPPGLAIGAFSER--FLEIAEKMPERGWYFDIPLY-VKYLKEKESTPSTPPMPQVFGINVA 269 (386)
T ss_dssp CTTTTTCSEEEEETTSTTCCCSSCEEEEECHH--HHHHHTTCTTCCSTTCHHHH-HHHHHHHSSCSSCCCHHHHHHHHHH
T ss_pred cccccCCcEEEEeccccccCCCceEEEEECHH--HHHHHhcCCCCceEEeHHHH-HHhhccCCCCCCCCCHHHHHHHHHH
Confidence 1 1479999999999999999999999764 2222210 0011000000 00000 000011111 223455666
Q ss_pred HHHHHHh-hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC---ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe
Q psy852 651 IRTYGLS-GLQKYIRRHCELAKLFEGKVRRDPRFEISNDV---RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV 726 (891)
Q Consensus 651 L~~lG~~-G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~---~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s 726 (891)
++.+... ++.+..++..++++++.+.|++. ++++..+. ..++++|+++.. ....++.+.|.++|+.+..
T Consensus 270 l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~gi~v~~ 342 (386)
T 2dr1_A 270 LRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTPPG------IKGDEVYEAMRKRGFELAK 342 (386)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECCTT------CCHHHHHHHHHHTTEECEE
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcCCC------CCHHHHHHHHHHCCeEEec
Confidence 7766666 78899999999999999999987 78876543 357888988521 2356788899888987554
Q ss_pred eccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 727 PASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 727 ~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+........+ ++++.++|++|++++++.|+++.+
T Consensus 343 ~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 377 (386)
T 2dr1_A 343 GYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVIN 377 (386)
T ss_dssp CCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred CccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 4433344567 999988999999999999998864
No 388
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.04 E-value=0.00031 Score=78.97 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=47.8
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
|+++|++.+++.. ..+.+|++.-.++..|.+.| +++|.++|+++|++|++|.+++|+
T Consensus 186 d~~~le~~l~~~~---~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~ 246 (429)
T 4e77_A 186 DLASVRQAFEQYP---QEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF 246 (429)
T ss_dssp CHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT
T ss_pred CHHHHHHHHHhcC---CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc
Confidence 8999999987531 22567777777788899998 999999999999999999999765
No 389
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.03 E-value=4.3e-05 Score=85.94 Aligned_cols=57 Identities=12% Similarity=-0.002 Sum_probs=48.8
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
|+++|++.+++.. ..+.+|+++-.++.+|.+.| +++|+++|++||++|++|.+++|+
T Consensus 185 d~~~le~~l~~~~---~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~ 245 (427)
T 3fq8_A 185 DLEAVKALFAENP---GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF 245 (427)
T ss_dssp CHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT
T ss_pred CHHHHHHHHHhCC---CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc
Confidence 8999999997631 23568888888888999999 999999999999999999999765
No 390
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.02 E-value=7.3e-05 Score=84.08 Aligned_cols=86 Identities=10% Similarity=-0.020 Sum_probs=69.8
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEE-eecccCccccccCHH---HHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS-TTLGTTSCCSFDNLA---EIGP 219 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~-~t~Gtt~~GavDpl~---~I~~ 219 (891)
.|++..-+|......+...|.+++.||+|++| +|+++|++.+++.. +-+|+ .+..+|.||.+-|.+ +|++
T Consensus 133 ~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~-----~~~v~~~~~~~NPtG~~~~~~~l~~l~~ 206 (422)
T 3d6k_A 133 KWLCPVPGYDRHFTITEHFGFEMINVPMTDEG-PDMGVVRELVKDPQ-----VKGMWTVPVFGNPTGVTFSEQTCRELAE 206 (422)
T ss_dssp EEEEEESCCHHHHHHHHHHTCEEEEEEEETTE-ECHHHHHHHHTSTT-----EEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHcCCEEEecCCCCCC-CCHHHHHHHHhcCC-----CeEEEEcCCCCCCCCCCCCHHHHHHHHH
Confidence 36777778988888887778899999998877 99999999986421 33444 677899999998887 7777
Q ss_pred HHH-HcCCceeeecccc
Q psy852 220 VAK-EFDVWLHVDGAYA 235 (891)
Q Consensus 220 i~~-~~~~~lHvDaA~G 235 (891)
+|+ ++|++|++|.+|+
T Consensus 207 ~~~~~~~~~li~De~y~ 223 (422)
T 3d6k_A 207 MSTAAPDFRIVWDNAYA 223 (422)
T ss_dssp CCCSSTTCEEEEECTTT
T ss_pred HHhhccCCEEEEECCcc
Confidence 777 8999999999994
No 391
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.02 E-value=8.1e-05 Score=83.89 Aligned_cols=57 Identities=12% Similarity=-0.015 Sum_probs=47.8
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
|+++|++.+++.. ..+.+|++.-.++..|.+.| +++|.++|++||++|++|-++.|+
T Consensus 186 d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~ 246 (429)
T 3k28_A 186 DLESVKYAFEQFG---DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF 246 (429)
T ss_dssp CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CHHHHHHHHHhCC---CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc
Confidence 7999999987532 12467777778888899999 999999999999999999999765
No 392
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=98.02 E-value=0.00017 Score=82.17 Aligned_cols=89 Identities=12% Similarity=0.131 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHhcc----CCC-cEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccCCeE
Q psy852 661 KYIRRHCELAKLFEGKVRR----DPR-FEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQNDE 735 (891)
Q Consensus 661 ~~i~~~~~lA~~L~~~L~~----~~~-~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~ 735 (891)
+..++..+++++|.+.|++ .+. +..+ ++..+++.|.+.+ ......+.+.|.++|+++..+ +...
T Consensus 352 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~g~~~~~~~~~------~~~~~~~~~~l~~~Gv~v~~~----g~~~ 420 (449)
T 2cjg_A 352 GLFERAVQHGKYLRARLDELAADFPAVVLDP-RGRGLMCAFSLPT------TADRDELIRQLWQRAVIVLPA----GADT 420 (449)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEETTEEEEECSS------HHHHHHHHHHHHHTTEECEEE----TTTE
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eeccEEEEEEECC------hHHHHHHHHHHHHCCeEEecC----CCCE
Confidence 3456667788888888865 344 4333 2345577787753 123567888888899874332 3456
Q ss_pred E-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 736 V-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 736 l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+ ++++..+|++||+++++.|++.+.
T Consensus 421 iRi~~~~~~t~e~i~~~l~~l~~~l~ 446 (449)
T 2cjg_A 421 VRFRPPLTVSTAEIDAAIAAVRSALP 446 (449)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 6 988888999999999999998763
No 393
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.01 E-value=0.00073 Score=76.61 Aligned_cols=56 Identities=11% Similarity=-0.002 Sum_probs=44.0
Q ss_pred HHHHHHHHHhhhhcCCcceEEEeecc-cCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 179 GATLRQVMQQDETMGYIPFFVSTTLG-TTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 179 ~~~L~~~l~~~~~~g~~p~~V~~t~G-tt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
+++|++.+++. .+..+.+|++.-. ++ +|.+-| +++|+++|++||++|++|-++.|+
T Consensus 201 ~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~ 261 (452)
T 3n5m_A 201 VKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGF 261 (452)
T ss_dssp HHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred HHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCC
Confidence 89999998721 1122456666666 67 998887 999999999999999999999764
No 394
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.01 E-value=0.00058 Score=77.40 Aligned_cols=278 Identities=13% Similarity=0.084 Sum_probs=140.3
Q ss_pred HHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 445 HCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
..++++++.+.+... .+++ +++||+|+|..++.++|...... |...++-+|+....-|-...-+..
T Consensus 93 ~~~la~~l~~~~~~~--~~v~--~~~ggseA~~~al~~~~~~~~~~----------g~~~~~~vi~~~~~yhg~~~~~~~ 158 (452)
T 3n5m_A 93 AIKLAEKLNEWLGGE--YVIF--FSNSGSEANETAFKIARQYYAQK----------GEPHRYKFMSRYRGYHGNTMATMA 158 (452)
T ss_dssp HHHHHHHHHHHHTSC--EEEE--EESSHHHHHHHHHHHHHHHHHTT----------TCTTCCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHHhCCCC--ceEE--EeCchHHHHHHHHHHHHHHHHhc----------CCCCCCEEEEECCCcCCCCHHHHh
Confidence 345666666665432 2355 78999999999999998654321 101123455555555644333332
Q ss_pred HcC------------ceEEEecCCCCCC------------cCHHHHHHHHHhhhhcCCccEEEEecC--C--ccc-----
Q psy852 525 MAF------------VRLKILEPDDKNS------------LRGATLRQVMQQDETMGYIPFFVSTTL--G--TTS----- 571 (891)
Q Consensus 525 l~g------------v~v~~Vp~d~~G~------------mD~~~Le~aI~~d~~~g~ip~~Vvata--G--TT~----- 571 (891)
+.+ ..+..+|.....+ .++++|+++|++... ..+.++++... + ...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~-~~~~~vi~ep~~~n~G~~~~~~~~ 237 (452)
T 3n5m_A 159 ATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELS-ETIAAFIMEPIITGGGILMAPQDY 237 (452)
T ss_dssp SCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCG-GGEEEEEECSSBTTTTCBCCCTTH
T ss_pred cCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCC-CCEEEEEEccccCCCCeeeCCHHH
Confidence 222 1344555422111 228999999973111 12233333332 3 221
Q ss_pred -------hhhh-----hc---------CC--------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhcc---CC
Q psy852 572 -------CYRK-----SQ---------GI--------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVV---DP 618 (891)
Q Consensus 572 -------c~~~-----ld---------Gi--------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~---~~ 618 (891)
|.+| +| |- -..|.++++ |.++.. .+.|+++.+++ +.+.+.. ..
T Consensus 238 l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~s--K~l~~G~~~ig~~~~~~~--i~~~~~~~~~~~ 313 (452)
T 3n5m_A 238 MKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMA--KGITSAYLPLSATAVKRE--IYEAFKGKGEYE 313 (452)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCCEEEEEEHH--HHGGGCSSSTTC
T ss_pred HHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeec--ccccCCCcceEEEEECHH--HHHHHhhccCCC
Confidence 3331 11 10 125777765 777655 77899888654 3232221 00
Q ss_pred CccccCCCCCccccCCcccccccccchHHHHH---HHHHHHhhHHHHHHHHHHHHHHHHHHhc----cCCCcEEeCCCce
Q psy852 619 LYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV---IRTYGLSGLQKYIRRHCELAKLFEGKVR----RDPRFEISNDVRL 691 (891)
Q Consensus 619 ~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~---L~~lG~~G~~~~i~~~~~lA~~L~~~L~----~~~~~eil~~~~~ 691 (891)
.++. ..+. ....+.+.++ |+.+..++ .+++..++.+++.+.|+ ..+.+..+. ..-
T Consensus 314 ~~~~----------~~t~----~~~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g 375 (452)
T 3n5m_A 314 FFRH----------INTF----GGNPAACALALKNLEIIENEN---LIERSAQMGSLLLEQLKEEIGEHPLVGDIR-GKG 375 (452)
T ss_dssp SCCC----------CCSS----TTCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTTCTTEEEEE-ESS
T ss_pred Cccc----------cCCC----CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-EEE
Confidence 1100 0111 1122333333 33333333 34444555555555554 444443332 222
Q ss_pred eEEEEEecCCc--chhh-hhhHHHHHHHHHhCCcEEEeecc--ccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 692 GLVCFRLRSEN--NLIA-DQNNRKLLEDINASGRLHMVPAS--QEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 692 ~iV~Fr~~~~~--~~~~-d~ln~~L~~~L~~~G~~~~s~s~--~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.++.|.+.+.. .... ......+.+.|.++|+++..... ......+ ++++..+|+++|+++++.|++++
T Consensus 376 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 449 (452)
T 3n5m_A 376 LLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAM 449 (452)
T ss_dssp SCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 34445542210 0000 12345788888999987543321 1124556 88888899999999999998875
No 395
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.00 E-value=0.00028 Score=80.45 Aligned_cols=154 Identities=13% Similarity=0.053 Sum_probs=83.4
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQK 661 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~ 661 (891)
.|.++++ |.++..+.+|+++.+++ +.+.+.. . .+ ..+. ....+.+++.+..+....-.+
T Consensus 289 pdi~t~s--K~l~~G~~iG~v~~~~~--~~~~~~~---~-~~---------~~t~----~~~~~~~aaa~aal~~~~~~~ 347 (451)
T 3oks_A 289 PDLIVTA--KGIAGGLPLSAVTGRAE--IMDSPHV---S-GL---------GGTY----GGNPIACAAALATIETIESEG 347 (451)
T ss_dssp CSEEEEC--GGGGTTSSCEEEEEEHH--HHTCSCT---T-SB---------CCSS----SSCHHHHHHHHHHHHHHHHTT
T ss_pred CCeeeeh--hhhhCCcceEEEEECHH--HHhhhcC---C-Cc---------CCCC----CCCHHHHHHHHHHHHHHhhhh
Confidence 4777665 99887778898887654 2111110 0 00 0111 112333434433332111123
Q ss_pred HHHHHHHHHHHHHHHhcc----CCCcEEeCCCceeEEEEEecCCc-chhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE
Q psy852 662 YIRRHCELAKLFEGKVRR----DPRFEISNDVRLGLVCFRLRSEN-NLIADQNNRKLLEDINASGRLHMVPASQEQNDEV 736 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~~----~~~~eil~~~~~~iV~Fr~~~~~-~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l 736 (891)
.+++..++.+++.+.|++ .+.+..+. ..-.++.|.+.... ...-......+.+.|.++|+++..+. .. ...+
T Consensus 348 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~~-~~~i 424 (451)
T 3oks_A 348 LVARAQQIEKIMKDRLGRLQAEDDRIGDVR-GRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCG-TY-GNVV 424 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-EETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEEC-TT-SCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-EeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCC-CC-CCEE
Confidence 444455555566555543 44443321 22346667664310 00013356688899999998754332 22 2456
Q ss_pred -EEecCCCCHHHHHHHHHHHHHHH
Q psy852 737 -FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 737 -~sv~~~tT~edId~li~~L~ei~ 759 (891)
++++..+|+++|+++++.|++++
T Consensus 425 Ri~~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 425 RFLPPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHH
Confidence 88888889999999999998876
No 396
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=98.00 E-value=5.5e-05 Score=85.31 Aligned_cols=178 Identities=13% Similarity=0.105 Sum_probs=108.0
Q ss_pred EEEecccchHHHHHHHH-H----cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------
Q psy852 508 MAYCSKEAHSCVEKAAM-M----AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-------- 571 (891)
Q Consensus 508 vI~~S~~aH~Sv~Kaa~-l----~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-------- 571 (891)
.|+++...|.+....+. + .|++++.+|.+ |+++|+++|++.+ ..+++.. ..|...
T Consensus 107 ~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~----~~v~~e~~~np~G~~~~l~~i~~l 177 (400)
T 3nmy_A 107 HVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLT-----DPAAFKAAIRADT----KMVWIETPTNPMLKLVDIAAIAVI 177 (400)
T ss_dssp EEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTT-----SHHHHHHHCCTTE----EEEEEESSCTTTCCCCCHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCC-----CHHHHHHHhccCC----CEEEEECCCCCCCeeecHHHHHHH
Confidence 57778888876655543 3 58888888875 8999999987532 1222222 223332
Q ss_pred hhhh-----hcCC-----------CCccEEEEcCcccCCccc-cc-E-EEEEeCCccchhhhccCCCccccCCCCCcccc
Q psy852 572 CYRK-----SQGI-----------EYADSFNVNVNKWLLTAF-DS-S-CLWVADRYKLTSALVVDPLYLQHGHEGAIDYR 632 (891)
Q Consensus 572 c~~~-----ldGi-----------~~aDSIs~d~HK~L~~P~-g~-G-~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~ 632 (891)
|+++ +|.+ -.+|.+..+.||++++|. .. | ++++++++.. +.+.....+
T Consensus 178 a~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~-~~l~~~~~~------------ 244 (400)
T 3nmy_A 178 ARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELA-EQMAFLQNS------------ 244 (400)
T ss_dssp HHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHH-HHHHHHHHH------------
T ss_pred HHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHH-HHHHHHHHh------------
Confidence 4332 2221 248999999999999883 33 4 4554454322 222110000
Q ss_pred CCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCc-----------------eeEEE
Q psy852 633 HWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVR-----------------LGLVC 695 (891)
Q Consensus 633 ~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~-----------------~~iV~ 695 (891)
.+-....+..|..++ +.+.+..++++..++++++.+.|++.|.++-+..|. -++++
T Consensus 245 -----~g~~~~~~~a~~~l~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~ 317 (400)
T 3nmy_A 245 -----IGGVQGPFDSFLALR--GLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVS 317 (400)
T ss_dssp -----HCCBCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEE
T ss_pred -----cCCCCCHHHHHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEE
Confidence 011223455676665 566788889999999999999999998887553322 35999
Q ss_pred EEecCCcchhhhhhHHHHHHHHHh
Q psy852 696 FRLRSENNLIADQNNRKLLEDINA 719 (891)
Q Consensus 696 Fr~~~~~~~~~d~ln~~L~~~L~~ 719 (891)
|.+++. .....++.+.|..
T Consensus 318 ~~l~~~-----~~~~~~~~~~l~~ 336 (400)
T 3nmy_A 318 IVLKGG-----FDAAKRFCEKTEL 336 (400)
T ss_dssp EEETTH-----HHHHHHHHHHCSS
T ss_pred EEeCCc-----HHHHHHHHHcCCc
Confidence 999642 1234455665543
No 397
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=97.99 E-value=0.00021 Score=81.41 Aligned_cols=280 Identities=12% Similarity=0.040 Sum_probs=143.3
Q ss_pred HHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 445 HCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
..++++++.+.+..... +|+ +++||+|+|..++.+++.....+. ...+.-+|.....-|-...-+..
T Consensus 96 ~~~la~~l~~~~~~~~~-~v~--~~~ggseA~~~al~~~~~~~~~~g----------~~~~~~vi~~~~~yhg~~~~~~~ 162 (459)
T 4a6r_A 96 VVELSSLLAEVTPAGFD-RVF--YTNSGSESVDTMIRMVRRYWDVQG----------KPEKKTLIGRWNGYHGSTIGGAS 162 (459)
T ss_dssp HHHHHHHHHHHSCTTCC-EEE--EESSHHHHHHHHHHHHHHHHHHTT----------CTTCCEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHHhCCCCCC-EEE--EeCchHHHHHHHHHHHHHHHHhcC----------CCCCCEEEEECCCcCCccHHHHh
Confidence 34566666666543222 555 788999999999999998654321 11123345555555543333332
Q ss_pred HcC------------ceEEEecCC-----CCCCcC--------HHHHHHHHHhhhhcCCccEEEE-e---cCCccc----
Q psy852 525 MAF------------VRLKILEPD-----DKNSLR--------GATLRQVMQQDETMGYIPFFVS-T---TLGTTS---- 571 (891)
Q Consensus 525 l~g------------v~v~~Vp~d-----~~G~mD--------~~~Le~aI~~d~~~g~ip~~Vv-a---taGTT~---- 571 (891)
+.+ ..+..+|.. .+. +| +++|+++|++.... .+.++++ . +.|...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~-~~~~vi~ep~~~~~G~~~~~~~ 240 (459)
T 4a6r_A 163 LGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGAD-KVAAFVGEPIQGAGGVIVPPAT 240 (459)
T ss_dssp HSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGG-GEEEEEECSSBTTTTCBCCCTT
T ss_pred hcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCC-CEEEEEECCccCCCCcccCCHH
Confidence 221 134445532 122 56 78888888752111 1222232 1 223222
Q ss_pred --------hhhh-----hc----CC-------------CCccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCc
Q psy852 572 --------CYRK-----SQ----GI-------------EYADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLY 620 (891)
Q Consensus 572 --------c~~~-----ld----Gi-------------~~aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Y 620 (891)
|.+| +| |+ -..|.++++ |.++.. .++|+++.+++ +.+.+.....+
T Consensus 241 ~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~s--K~l~gg~~~lg~v~~~~~--i~~~~~~~~~~ 316 (459)
T 4a6r_A 241 YWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAA--KGLSSGYLPIGAVFVGKR--VAEGLIAGGDF 316 (459)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEEC--GGGGTTSSCCEEEEECHH--HHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehh--hhhcCCCCCccceeeCHH--HHHHhhcCCCc
Confidence 4331 11 11 124778775 987765 57888888554 22222110000
Q ss_pred cccCCCCCccccCCcccccccccchHHHHH---HHHHHHhhHHHHHH--HHHHHHHHHHHHhccCCCcEEeCCCceeEEE
Q psy852 621 LQHGHEGAIDYRHWGIPLSRRFRSLKLWFV---IRTYGLSGLQKYIR--RHCELAKLFEGKVRRDPRFEISNDVRLGLVC 695 (891)
Q Consensus 621 l~~~~e~~~~~~~~ti~~SRr~~aL~lW~~---L~~lG~~G~~~~i~--~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~ 695 (891)
. + ..+.. ...+.+.++ |+.+..+.+.+.++ ....+.+.|.+.|...+.+..+. +.-+++.
T Consensus 317 ~-~---------~~t~~----~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~g~~~~ 381 (459)
T 4a6r_A 317 N-H---------GFTYS----GHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVR-GVGMVQA 381 (459)
T ss_dssp H-H---------HHHHC----SCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEE-EETTEEE
T ss_pred c-c---------CCCCC----CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-EEEEEEE
Confidence 0 0 00111 112333333 33333344433333 22233333334445555444332 2334666
Q ss_pred EEecCCcch-----hhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHHHHH
Q psy852 696 FRLRSENNL-----IADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLGLVC 763 (891)
Q Consensus 696 Fr~~~~~~~-----~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~~~~ 763 (891)
|.+...... ........+.+.|.++|+++... + ..+ ++++..+|+++++++++.|++.+..+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 382 FTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC----G-DHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp EEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE----T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCccccccccchHHHHHHHHHHHHHCCeEEecC----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 776532100 01223667888999999874432 2 456 888888999999999999998876444
No 398
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=97.96 E-value=0.00022 Score=80.99 Aligned_cols=57 Identities=12% Similarity=0.035 Sum_probs=45.9
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
|+++|++.+++.. ..+.+|+++-..+.+|.+-| +++|.++|++||++|++|.+++|+
T Consensus 187 d~~~le~~l~~~~---~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~ 247 (453)
T 2cy8_A 187 DIEGMREVFANHG---SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF 247 (453)
T ss_dssp CHHHHHHHHHHHG---GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CHHHHHHHHHhcC---CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc
Confidence 8999999997531 12456666666666898877 999999999999999999999764
No 399
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=97.96 E-value=0.00043 Score=78.59 Aligned_cols=58 Identities=17% Similarity=0.105 Sum_probs=44.5
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeeccc-CccccccC----HHHHHHHHHHcCCceeeeccccCCc
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGT-TSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gt-t~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
|+++|++.++... ..+.+|++.-.. +..|.+-| +++|+++|++||++|++|-++.|+.
T Consensus 196 d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g 258 (448)
T 3dod_A 196 CLRELAQLLEEHH---EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFG 258 (448)
T ss_dssp HHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred HHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCC
Confidence 6899999997321 124566666655 67787766 9999999999999999999997643
No 400
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=97.95 E-value=0.00079 Score=76.66 Aligned_cols=178 Identities=13% Similarity=0.053 Sum_probs=100.8
Q ss_pred ccccccCCC------CCCHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCC
Q psy852 18 PRFHAYFPS------GNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPND 91 (891)
Q Consensus 18 p~~~~~~~~------~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~ 91 (891)
.+|+++..+ +-..|.+...+...+-.....+....+ .+...+..++|+++++.+... -+
T Consensus 61 ~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~~~--------~v----- 125 (451)
T 3oks_A 61 NRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTP--YEGYVAVCEQLNRLTPVRGDK--------RS----- 125 (451)
T ss_dssp CEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSC--CHHHHHHHHHHHHHSSCCSSE--------EE-----
T ss_pred CEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccC--CHHHHHHHHHHHHhCCcCCCC--------EE-----
Confidence 346665532 224677766665554322111211222 244556778889888633110 00
Q ss_pred ccccccccCCCCCCCCcccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcC--------
Q psy852 92 IDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF-------- 163 (891)
Q Consensus 92 ~~~~~~~~~t~~~~~~~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~-------- 163 (891)
.+++||+.. +...+.++|...+ .+.+|.....-|-...-++.+.+
T Consensus 126 ---------------~~~~sGseA-~~~Alk~a~~~~g-----------~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 178 (451)
T 3oks_A 126 ---------------ALFNSGSEA-VENAVKIARSHTH-----------KPAVVAFDHAYHGRTNLTMALTAKVMPYKDG 178 (451)
T ss_dssp ---------------EEESSHHHH-HHHHHHHHHHHHC-----------CCEEEEETTCCCCSSHHHHHHCCCCTTTTTT
T ss_pred ---------------EEeCcHHHH-HHHHHHHHHHhcC-----------CCeEEEEcCCcCCccHHHHHhcCCCcccccC
Confidence 146788764 4445556665321 12234444455654444443322
Q ss_pred -----CeEEEEecCCC-------------CcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHH
Q psy852 164 -----VRLKILEPDDK-------------NSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVA 221 (891)
Q Consensus 164 -----~~v~~V~~d~~-------------g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~ 221 (891)
..+..++.... +.-+++.+++.|++.. .+..+.+|++.-.+++.|.+-| +++|+++|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~ 257 (451)
T 3oks_A 179 FGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQI-GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWC 257 (451)
T ss_dssp CCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred CCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhc-CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHH
Confidence 15677776521 1124566666665432 1233567777777778888877 99999999
Q ss_pred HHcCCceeeeccccCCc
Q psy852 222 KEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 222 ~~~~~~lHvDaA~GG~~ 238 (891)
++||++|++|-+|.|+.
T Consensus 258 ~~~g~~lI~DEv~~g~g 274 (451)
T 3oks_A 258 RKNDVVFIADEVQTGFA 274 (451)
T ss_dssp HHTTCEEEEECTTTTTT
T ss_pred HHcCCEEEEEecccCCC
Confidence 99999999999997643
No 401
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=97.93 E-value=0.00022 Score=81.60 Aligned_cols=64 Identities=14% Similarity=0.079 Sum_probs=50.2
Q ss_pred CCCCcccHHHHHHHHHhhhhcCCcceEEEeec-ccCccccccC----HHHHHHHHHHcCCceeeeccccCCc
Q psy852 172 DDKNSLRGATLRQVMQQDETMGYIPFFVSTTL-GTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 172 d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~-Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+..+..|+++|++.|++.. ..+.+|++.- .++++|.+-| +++|.++|++||++|++|-++.|+.
T Consensus 213 ~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g 281 (457)
T 3tfu_A 213 RDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFG 281 (457)
T ss_dssp SSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCc
Confidence 3344579999999998531 1245666666 7888998877 9999999999999999999997643
No 402
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=97.93 E-value=0.00016 Score=81.68 Aligned_cols=246 Identities=10% Similarity=0.026 Sum_probs=140.4
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCce----------EEE
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVR----------LKI 532 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~----------v~~ 532 (891)
+|+ +++|+++++..+ .+ ... +.-.|++..-.|.+...++...|.+ ++.
T Consensus 134 ~i~--~t~G~~~al~~~-~~----l~~---------------~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~ 191 (449)
T 3qgu_A 134 EIF--ISDGSKCDIARI-QM----MFG---------------SKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEY 191 (449)
T ss_dssp GEE--EESCHHHHHHHH-HH----HHC---------------SSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEE
T ss_pred HEE--EccCHHHHHHHH-HH----HhC---------------CCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEE
Confidence 566 678888887765 22 111 1224778888898888888877776 888
Q ss_pred ecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----------------------
Q psy852 533 LEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK----------------------- 575 (891)
Q Consensus 533 Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~----------------------- 575 (891)
+|.++++.++++ ++ +. .....++++. ..|+.. |.++
T Consensus 192 ~~~~~~~~~~~~-~~----~~--~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~ 264 (449)
T 3qgu_A 192 MVCNPDNHFFPD-LS----KA--KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTI 264 (449)
T ss_dssp EECCGGGTTCCC-GG----GC--CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSG
T ss_pred EecccccCCcCC-hh----Hc--CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCH
Confidence 888765433322 11 10 1112223321 134432 3221
Q ss_pred --hcCCCCccEEEEcCcccCC-cccccEEEEEeCCccchh-hhccCCCccccCCCCCccccCCcccccccccchHHHHHH
Q psy852 576 --SQGIEYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTS-ALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVI 651 (891)
Q Consensus 576 --ldGi~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~-~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L 651 (891)
+++....+-+..+++|+++ ....+|+++.+++. +.. .......+.. ....+.. ....+.++++.
T Consensus 265 ~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~a~~ 332 (449)
T 3qgu_A 265 YEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKAL-KYANGEPVHADWNR--------VMTTCFN---GASNIVQAGGL 332 (449)
T ss_dssp GGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTC-BCTTSCBHHHHHHH--------HHHHSCC---CCCHHHHHHHH
T ss_pred hhccCCCCcEEEEecchhhcCCccceeEEEecCHHH-HhhhhhhHHHHHHH--------HhhcccC---CCCHHHHHHHH
Confidence 1111234577889999997 44778998876542 110 0000000000 0000000 01123334444
Q ss_pred HHH---HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhC-CcEEEee
Q psy852 652 RTY---GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINAS-GRLHMVP 727 (891)
Q Consensus 652 ~~l---G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~-G~~~~s~ 727 (891)
..+ +.+.+.++.++..+++++|.+.|++. ++++..+.....+.+.+.+. ...++.+.|.++ |+++..+
T Consensus 333 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gI~v~pg 404 (449)
T 3qgu_A 333 ACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFPGK-------PSWDVFAEILERCNIVTTPG 404 (449)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEG
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECCCC-------CHHHHHHHHHHHCCEEEecc
Confidence 433 34567788888899999999999887 77777555566777877522 346777777765 8775544
Q ss_pred ccc--cCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 728 ASQ--EQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 728 s~~--~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
... .+...+ +++. .++++|+++++.|++++
T Consensus 405 ~~f~~~~~~~iRis~~--~~~e~i~~~l~~l~~~~ 437 (449)
T 3qgu_A 405 SGYGPAGEGFVRASAF--GSRENILEAVRRFKEAY 437 (449)
T ss_dssp GGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred hHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 322 334566 8853 48999999999998776
No 403
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=97.93 E-value=4.3e-05 Score=84.51 Aligned_cols=243 Identities=9% Similarity=-0.052 Sum_probs=137.4
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC--CCCCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP--DDKNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~--d~~G~ 540 (891)
+|+ +++|+++++..++..... .. +.-.|++..-.|.+....+...|.+++.+|. ++++.
T Consensus 97 ~i~--~t~g~~~a~~~~~~~~~~--~~---------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (397)
T 3fsl_A 97 ATI--QTLGGSGALKVGADFLKR--YF---------------PESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNG 157 (397)
T ss_dssp EEE--EESHHHHHHHHHHHHHHH--HC---------------TTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTE
T ss_pred EEE--EcCCcHHHHHHHHHHHHh--cC---------------CCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCc
Confidence 455 788999999888643321 11 1124778888999998888888999999998 56899
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEE----ecCCccc-----------hhhh-----hcC---------------------C
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVS----TTLGTTS-----------CYRK-----SQG---------------------I 579 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vv----ataGTT~-----------c~~~-----ldG---------------------i 579 (891)
+|+++|++++++... ..-++++ +..|++. |.++ +|. .
T Consensus 158 ~d~~~l~~~l~~~~~--~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (397)
T 3fsl_A 158 VRFNDLLATLKTLQA--GSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASA 235 (397)
T ss_dssp ECHHHHHHHHTTCCT--TCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHT
T ss_pred CcHHHHHHHHHhCCC--CCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhc
Confidence 999999999985311 1122222 3355553 3321 111 1
Q ss_pred CCccEEEEcCcccCCcc-cccEEEEEe--CCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH-
Q psy852 580 EYADSFNVNVNKWLLTA-FDSSCLWVA--DRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG- 655 (891)
Q Consensus 580 ~~aDSIs~d~HK~L~~P-~g~G~llvR--~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG- 655 (891)
..-+-+..+.+|.++.| ..+|+++.. +...+.........+.+... .. ...+.+......+.
T Consensus 236 ~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-----~~~~~~~~~~~~l~~ 301 (397)
T 3fsl_A 236 GLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNY---------SS-----PPNFGAQVVAAVLND 301 (397)
T ss_dssp TCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTT---------SS-----CCSHHHHHHHHHHTS
T ss_pred CCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhcc---------CC-----CCHHHHHHHHHHhcC
Confidence 11235556789988744 458888763 33222211111000000000 00 00122222222221
Q ss_pred -------HhhHHHHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEE
Q psy852 656 -------LSGLQKYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHM 725 (891)
Q Consensus 656 -------~~G~~~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~ 725 (891)
.+.+++..++..++++++.+.|++.+ ++++..+.....+...+ ..+.+...|.+.|+...
T Consensus 302 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~ 371 (397)
T 3fsl_A 302 EALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGL----------SAAQVDRLREEFGVYLI 371 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCC----------CHHHHHHHHHTTCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCC----------CHHHHHHHHHhCCEEEC
Confidence 45567777788889999999998764 55544322222222222 12446666777887743
Q ss_pred eeccccCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy852 726 VPASQEQNDEVFELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 726 s~s~~~g~~~l~sv~~~tT~edId~li~~L~ei 758 (891)
.+. .+++... ++++|+++++.|+++
T Consensus 372 ~g~-------Ris~~~~-~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 372 ASG-------RMCVAGL-NTANVQRVAKAFAAV 396 (397)
T ss_dssp TTC-------EEEGGGC-CTTTHHHHHHHHHHH
T ss_pred CCC-------eEEEEec-CHhhHHHHHHHHHhh
Confidence 221 4666544 446799999998764
No 404
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=97.91 E-value=6.8e-05 Score=83.56 Aligned_cols=84 Identities=13% Similarity=0.024 Sum_probs=61.7
Q ss_pred EEecCCCChHHHHHHHHcCCe-EEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVR-LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAEIGPV 220 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~-v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~I~~i 220 (891)
|++..-+|.+...++...|.+ ++.++.++++.++.+ +++ + ..+.+|+++..+|.+|.+-| +++|+++
T Consensus 121 Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-l~~-~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~ 191 (400)
T 3asa_A 121 VAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPE-FPE-D-------THIDILCLCSPNNPTGTVLNKDQLRAIVHY 191 (400)
T ss_dssp EEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCC-CCT-T-------CCCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCcceEecccchhcCcccC-hhh-c-------cCccEEEEeCCCCCCCCcCCHHHHHHHHHH
Confidence 666777898888887766777 999998865444322 221 1 12346666678999999987 5678889
Q ss_pred HHHcCCceeeeccccCC
Q psy852 221 AKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 221 ~~~~~~~lHvDaA~GG~ 237 (891)
|+++|+++++|.+|+++
T Consensus 192 ~~~~~~~li~De~~~~~ 208 (400)
T 3asa_A 192 AIEHEILILFDAAYSTF 208 (400)
T ss_dssp HHHTTCEEEEECTTGGG
T ss_pred HHHcCCEEEEEchhhhh
Confidence 99999999999999653
No 405
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=97.89 E-value=2.7e-05 Score=86.48 Aligned_cols=241 Identities=8% Similarity=-0.023 Sum_probs=133.4
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC--CCCCcCHHHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD--DKNSLRGATL 546 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d--~~G~mD~~~L 546 (891)
|+|+++++..++.+.+... + +.-.|+++.-.|.+....+...|.+++.+|.+ +++.+|+++|
T Consensus 102 t~G~~~al~~~~~~l~~~~-~---------------~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 165 (401)
T 7aat_A 102 GISGTGSLRVGANFLQRFF-K---------------FSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGA 165 (401)
T ss_dssp EEHHHHHHHHHHHHHHHHC-T---------------TCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHH
T ss_pred cCcchHHHHHHHHHHHHhc-c---------------CCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHH
Confidence 8899999998876654321 0 12247777888888888888889999999974 4799999999
Q ss_pred HHHHHhhhhcCCccEEEE----ecCCccc-----------hhhh--------------hcC-------------CCCccE
Q psy852 547 RQVMQQDETMGYIPFFVS----TTLGTTS-----------CYRK--------------SQG-------------IEYADS 584 (891)
Q Consensus 547 e~aI~~d~~~g~ip~~Vv----ataGTT~-----------c~~~--------------ldG-------------i~~aDS 584 (891)
++.+++. ..+ .-++++ +..|++. |.++ ..+ ...-.-
T Consensus 166 ~~~l~~~-~~~-~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i 243 (401)
T 7aat_A 166 MEDISKI-PEK-SIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVV 243 (401)
T ss_dssp HHHHTTS-CTT-CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCE
T ss_pred HHHHHhC-CCC-cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEE
Confidence 9998762 212 223332 2356543 3321 011 011234
Q ss_pred EEEcCcccCCcc-cccEEEEEe--CCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH------
Q psy852 585 FNVNVNKWLLTA-FDSSCLWVA--DRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG------ 655 (891)
Q Consensus 585 Is~d~HK~L~~P-~g~G~llvR--~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG------ 655 (891)
+..++||.++.| .-+|+++.. ++............+.+.. +... .++.++.+...+.
T Consensus 244 ~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~----~~~~~~~~~~~l~~~~~~~ 309 (401)
T 7aat_A 244 LSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPM----------YSNP----PMNGARIASLILNTPELRK 309 (401)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHH----------HSSC----CHHHHHHHHHHHHCHHHHH
T ss_pred EEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhc----------cCCC----ChHHHHHHHHHhCCHHHHH
Confidence 668899988755 337888863 2221100000000000000 0000 0122222322221
Q ss_pred --HhhHHHHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 656 --LSGLQKYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 656 --~~G~~~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
.+.+.+..++..+++++|.+.|++.. ++++.. ++.+.+.| .+. ..+.+...+.+.|+.+. +.
T Consensus 310 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-~~~~~~~~--~~~-------~~~~~~~ll~~~gi~v~-~~-- 376 (401)
T 7aat_A 310 EWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHIT-DQIGMFCF--TGL-------KPEQVERLTKEFSIYMT-KD-- 376 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHH-HCCSSEEE--CCC-------CHHHHHHHHHHHCEECC-TT--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceec-CCcceEEe--cCC-------CHHHHHHHHHhCCEecc-CC--
Confidence 33456666777888999999998752 344332 23333333 222 12334333466787632 11
Q ss_pred cCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy852 731 EQNDEVFELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 731 ~g~~~l~sv~~~tT~edId~li~~L~ei~ 759 (891)
..++++..++++ ||++++.|++++
T Consensus 377 ----~Ris~~~~~~~~-i~~~~~~l~~~~ 400 (401)
T 7aat_A 377 ----GRISVAGVASSN-VGYLAHAIHQVT 400 (401)
T ss_dssp ----CEEEGGGCCTTT-HHHHHHHHHHHH
T ss_pred ----CeEEeccCChhh-HHHHHHHHHHHh
Confidence 137777665555 999999998764
No 406
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=97.89 E-value=0.00016 Score=82.61 Aligned_cols=155 Identities=8% Similarity=-0.044 Sum_probs=82.7
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQK 661 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~ 661 (891)
.|-++++ |.++..+..|+++.+++ +.+.+.. . .+ ..+.. ...+.+.+.+..+....-.+
T Consensus 287 pdi~t~s--K~~~~G~~~G~~~~~~~--i~~~~~~---~-~~---------~~t~~----~~~~~~aaa~aal~~~~~~~ 345 (453)
T 4ffc_A 287 PDIVTMA--KGIAGGMPLSAVTGRAE--LMDAVYA---G-GL---------GGTYG----GNPVTCAAAVAALGVMRELD 345 (453)
T ss_dssp CSEEEEC--GGGGTTSSCEEEEEEHH--HHTTSCT---T-SS---------CCSSS----SCHHHHHHHHHHHHHHHHTT
T ss_pred cchHhhh--hhhcCCcCeEEEEECHH--HHhhhcc---c-Cc---------CCCCC----cCHHHHHHHHHHHHHhhhhh
Confidence 4777765 98877677899887654 2111110 0 00 01111 12233333333332111123
Q ss_pred HHHHHHHHHHHHHHHhc----cCCCcEEeCCCceeEEEEEecCCc-chhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE
Q psy852 662 YIRRHCELAKLFEGKVR----RDPRFEISNDVRLGLVCFRLRSEN-NLIADQNNRKLLEDINASGRLHMVPASQEQNDEV 736 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~----~~~~~eil~~~~~~iV~Fr~~~~~-~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l 736 (891)
.+++..++.+++.+.|+ ..+.+..+. ..-.++.|.+.... ...-......+.+.|.++|+++..+ ... ...+
T Consensus 346 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-~~~-~~~i 422 (453)
T 4ffc_A 346 LPARARAIEASVTSRLSALAEEVDIIGEVR-GRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTC-GTF-GNVI 422 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSEEEEE-EETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEE-CTT-SCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-eeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecC-CCC-CCEE
Confidence 34444455555555554 345443321 22346667664310 0011335678888999999874332 222 2456
Q ss_pred -EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 737 -FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 737 -~sv~~~tT~edId~li~~L~ei~~ 760 (891)
++++...|+++|+++++.|++++.
T Consensus 423 Ri~~~~~~t~e~i~~~l~~l~~~l~ 447 (453)
T 4ffc_A 423 RLLPPLVIGDDLLDEGITALSDIIR 447 (453)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHH
Confidence 888888899999999999998874
No 407
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=97.89 E-value=0.00025 Score=79.76 Aligned_cols=154 Identities=10% Similarity=0.007 Sum_probs=80.1
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccC-CCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD-PLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQ 660 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~-~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~ 660 (891)
.|.++++ |.+++++++|+++.+++ +.+.+... ..+. ..+. ....+.+.+.+..+....-+
T Consensus 263 ~di~t~s--K~~~~G~~iG~~~~~~~--i~~~~~~~~~~~~-----------~~t~----~~~~~a~aaa~aal~~~~~~ 323 (434)
T 3l44_A 263 PDLTALG--KVIGGGLPIGAYGGKKE--IMEQVAPLGPAYQ-----------AGTM----AGNPASMASGIACLEVLQQE 323 (434)
T ss_dssp CSEEEEE--GGGGTTSSCEEEEECHH--HHTTBTTTSSBCC-----------CCTT----TTCHHHHHHHHHHHHHHTST
T ss_pred CCeeehh--hhhcCCcCeeeEEEcHH--HHHhhccCCCccc-----------CCCC----CcCHHHHHHHHHHHHHHHcc
Confidence 4666665 88888888999877543 22211110 0000 0011 11223333333333211113
Q ss_pred HHHHHHHHHHHHHHHHhccC----CCcEEeCCCceeEEEEEecCCcch-------hhhhhHHHHHHHHHhCCcEEEeecc
Q psy852 661 KYIRRHCELAKLFEGKVRRD----PRFEISNDVRLGLVCFRLRSENNL-------IADQNNRKLLEDINASGRLHMVPAS 729 (891)
Q Consensus 661 ~~i~~~~~lA~~L~~~L~~~----~~~eil~~~~~~iV~Fr~~~~~~~-------~~d~ln~~L~~~L~~~G~~~~s~s~ 729 (891)
+.+++..++.+++.+.|++. +.+..+ +...+++.|.+...... .-......+.+.|.++|+++..+
T Consensus 324 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-- 400 (434)
T 3l44_A 324 GLYEKLDELGATLEKGILEQAAKHNIDITL-NRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPS-- 400 (434)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSS--
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeec--
Confidence 45556666777777776552 322221 22345777777432100 01223467888899999773322
Q ss_pred ccCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy852 730 QEQNDEVFELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 730 ~~g~~~l~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+...+ .++..+|++|++++++.|++++.
T Consensus 401 --~~~~~-rl~~~~t~e~i~~~l~~l~~~l~ 428 (434)
T 3l44_A 401 --KYEAW-FLTTEHTKEDIEYTIEAVGRAFA 428 (434)
T ss_dssp --TTCCE-ECCTTCCHHHHHHHHHHHHHHHH
T ss_pred --CCCcE-EEecccCHHHHHHHHHHHHHHHH
Confidence 11223 23457799999999999998874
No 408
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=97.89 E-value=2.3e-05 Score=86.73 Aligned_cols=239 Identities=9% Similarity=0.030 Sum_probs=136.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC--CCCCcCHHHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD--DKNSLRGATL 546 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d--~~G~mD~~~L 546 (891)
++|+++++..++.+++... +.-.|++..-+|.+...++...|.+++.+|.+ +++.+|+++|
T Consensus 97 ~~g~~~a~~~~~~~~~~~~-----------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 159 (394)
T 2ay1_A 97 TVGGTGALRQALELARMAN-----------------PDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGM 159 (394)
T ss_dssp EEHHHHHHHHHHHHHHHHC-----------------TTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHH
T ss_pred cCCchhHHHHHHHHHHhcC-----------------CCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHH
Confidence 7899999998887765311 01136677778888888888888899999985 6788999999
Q ss_pred HHHHHhhhhcCCccEEEEe----cCCccc-----------hhhh-----hcC---------------CC-----CccE-E
Q psy852 547 RQVMQQDETMGYIPFFVST----TLGTTS-----------CYRK-----SQG---------------IE-----YADS-F 585 (891)
Q Consensus 547 e~aI~~d~~~g~ip~~Vva----taGTT~-----------c~~~-----ldG---------------i~-----~aDS-I 585 (891)
++++++.. ....++++. ..|+.. |.++ +|. +. ..|. +
T Consensus 160 ~~~l~~~~--~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (394)
T 2ay1_A 160 KADLAAAK--KGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLI 237 (394)
T ss_dssp HHHHHTCC--TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEE
T ss_pred HHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEE
Confidence 99997631 111223322 245543 3321 111 10 1233 3
Q ss_pred EEcCcccCCcc-cccEEEEE--eCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH-------
Q psy852 586 NVNVNKWLLTA-FDSSCLWV--ADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG------- 655 (891)
Q Consensus 586 s~d~HK~L~~P-~g~G~llv--R~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG------- 655 (891)
..+.||+++.| ..+|++++ ++++.+......-....+.. ++ . ...+.++++...+.
T Consensus 238 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~--~---~~~~~~~a~~~~l~~~~l~~~ 303 (394)
T 2ay1_A 238 AASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQT---------YS--F---PPFHGAKIVSTVLTTPELRAD 303 (394)
T ss_dssp EEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTT---------TS--S---CCCHHHHHHHHHHHSHHHHHH
T ss_pred EEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhh---------cC--C---CChHHHHHHHHHhcChHHHHH
Confidence 55899999744 45799987 33322111110000000000 00 0 01233333333332
Q ss_pred -HhhHHHHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecccc
Q psy852 656 -LSGLQKYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQE 731 (891)
Q Consensus 656 -~~G~~~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~ 731 (891)
.+.+++..++..++++++.+.|++.. ++++..+.....+.+.+. .+.+...|.+.|+++. +
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~~~~~l~~~gi~v~-~---- 368 (394)
T 2ay1_A 304 WMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT----------PEQVKRIKEEFGIYMV-G---- 368 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC----------HHHHHHHHHHHCEECC-T----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC----------HHHHHHHHHhCCEEec-C----
Confidence 24566777777888899999888753 355543222333333331 1356666777887632 2
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy852 732 QNDEVFELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 732 g~~~l~sv~~~tT~edId~li~~L~ei 758 (891)
...++++ .+++++++++++.|+++
T Consensus 369 --~~Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 369 --DSRINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp --TCEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred --CCeEEee-cCCHhhHHHHHHHHHHc
Confidence 1137777 47899999999999875
No 409
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=97.10 E-value=1.8e-06 Score=96.09 Aligned_cols=248 Identities=9% Similarity=0.026 Sum_probs=142.1
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC-CC--C
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD-DK--N 539 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d-~~--G 539 (891)
+|+ +++|+++++..++.+.... .-.|++..-+|.+...++...|.+++.+|.+ ++ +
T Consensus 91 ~v~--~~~g~~~a~~~~~~~~~~~-------------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 149 (392)
T 3b1d_A 91 DIV--FVEGVVPAISIAIQAFTKE-------------------GEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLF 149 (392)
Confidence 455 7889999998887765221 1136777778888888888778888888884 33 4
Q ss_pred CcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hc---------C--------C----
Q psy852 540 SLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQ---------G--------I---- 579 (891)
Q Consensus 540 ~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ld---------G--------i---- 579 (891)
.+|+++|++++++... ..+++. +..|+.. |.++ +| | +
T Consensus 150 ~~d~~~l~~~l~~~~~---~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 226 (392)
T 3b1d_A 150 QIDFEQLENDIVENDV---KLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDF 226 (392)
Confidence 6999999999973211 112222 2345442 3221 11 1 0
Q ss_pred CCccEEEEcCcccCC-cccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH--HH
Q psy852 580 EYADSFNVNVNKWLL-TAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY--GL 656 (891)
Q Consensus 580 ~~aDSIs~d~HK~L~-~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l--G~ 656 (891)
...+-+..+.+|+++ ....+|+++..++............+ ++.. ...+.++++...+ +.
T Consensus 227 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~--------------~~~~---~~~~~~~a~~~~l~~~~ 289 (392)
T 3b1d_A 227 KDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVN--------------NHHE---VSSLGYIATETAYRYGK 289 (392)
Confidence 011234567899997 44578888887653332111110000 0000 0112222222222 33
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcc-CCCcEEeCCCceeEE-EEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeecccc--
Q psy852 657 SGLQKYIRRHCELAKLFEGKVRR-DPRFEISNDVRLGLV-CFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPASQE-- 731 (891)
Q Consensus 657 ~G~~~~i~~~~~lA~~L~~~L~~-~~~~eil~~~~~~iV-~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s~~~-- 731 (891)
+.+++..++..++++++.+.|++ .+++++.. +..+.+ ++++... +.....+.+.|. +.|+.+..+....
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~i~~~~~-----~~~~~~l~~~l~~~~gi~v~~g~~f~~~ 363 (392)
T 3b1d_A 290 PWLVALKAVLEENIQFAVEYFAQEAPRLKVMK-PQGTYLIWLDFSDY-----GLTDDALFTLLHDQAKVILNRGSDYGSE 363 (392)
Confidence 45666777778888999999987 67887654 344443 4566421 113456778885 6788754433222
Q ss_pred CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 732 QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 732 g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+...+ +++.. ++++|+++++.|++.+
T Consensus 364 ~~~~iRi~~~~--~~e~i~~~l~~l~~~l 390 (392)
T 3b1d_A 364 GELHARLNIAA--PKSLVEEICKRIVCCL 390 (392)
Confidence 33455 77654 5788999998887654
No 410
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=97.88 E-value=0.00081 Score=75.53 Aligned_cols=60 Identities=10% Similarity=-0.058 Sum_probs=46.5
Q ss_pred cccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 176 SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 176 ~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
.+|+++|++.+++.. ...+.+|+++-.++.+|.+-| +++|+++|++||++|++|.+++|+
T Consensus 186 ~~d~~~le~~l~~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~ 249 (433)
T 1zod_A 186 LAELDYAFDLIDRQS--SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGV 249 (433)
T ss_dssp HHHHHHHHHHHHHHC--CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred HHHHHHHHHHHHhcC--CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCC
Confidence 468999999997521 112456666665677898766 999999999999999999999764
No 411
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=97.87 E-value=0.00017 Score=80.36 Aligned_cols=243 Identities=7% Similarity=0.001 Sum_probs=135.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC-CCCCCc
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP-DDKNSL 541 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~-d~~G~m 541 (891)
+++ +++|+++++..++.+... +.-.|+++.-.|.+...++...|.+++.+|. ++++.+
T Consensus 103 ~i~--~t~g~~~al~~~~~~~~~-------------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (413)
T 3t18_A 103 SAI--ATPGGTGAIRSAIFSYLD-------------------EGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDDFAF 161 (413)
T ss_dssp EEE--EESHHHHHHHHHHHHHCC-------------------SSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTTSSB
T ss_pred cEE--EcCccHHHHHHHHHHhcC-------------------CCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCCCCc
Confidence 455 788999999888764310 1224777777888888888888999999998 566799
Q ss_pred CHHHHHHHHHhhhhcCCc-cEEEEec----CCccc-----------hh------hh-----hcCC---------------
Q psy852 542 RGATLRQVMQQDETMGYI-PFFVSTT----LGTTS-----------CY------RK-----SQGI--------------- 579 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~i-p~~Vvat----aGTT~-----------c~------~~-----ldGi--------------- 579 (891)
|+++|+++|++....+.. .++++.. .|++. |. ++ +|.+
T Consensus 162 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 241 (413)
T 3t18_A 162 NIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFF 241 (413)
T ss_dssp CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGG
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHH
Confidence 999999999863222222 2333322 35543 44 42 1111
Q ss_pred ---CC--cc---EEEEcCcccCCcc-cccEEEEEe--CCccchhhhccCCCccccCCCCCccccCCcccccccccchHHH
Q psy852 580 ---EY--AD---SFNVNVNKWLLTA-FDSSCLWVA--DRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLW 648 (891)
Q Consensus 580 ---~~--aD---SIs~d~HK~L~~P-~g~G~llvR--~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW 648 (891)
.. -| -+..+++|.++.| ..+|+++.. +++.. +.+.....+... ..+. ....+.+.
T Consensus 242 ~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~-----~~~~~~~~ 307 (413)
T 3t18_A 242 EKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEII-EEFEASLAHSAR--------CNWS-----NGTHAAQN 307 (413)
T ss_dssp GGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHH-HHHHHHHHHHHH--------HHTS-----SCCHHHHH
T ss_pred HHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHH-HHHHHHHHHhhh--------cccc-----CCChHHHH
Confidence 00 12 2334899999855 558888873 33322 222110000000 0000 01123333
Q ss_pred HHHHHHHH-------hhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCcee-EEEEEecCCcchhhhhhHHHHHHHHHhC
Q psy852 649 FVIRTYGL-------SGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLG-LVCFRLRSENNLIADQNNRKLLEDINAS 720 (891)
Q Consensus 649 ~~L~~lG~-------~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-iV~Fr~~~~~~~~~d~ln~~L~~~L~~~ 720 (891)
+....+.. +.+++..++..++++++.+.|++. ++++..+ +.+ .+++... ...++.+.|.+.
T Consensus 308 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~-~~~~~~~~~~~---------~~~~~~~~l~~~ 376 (413)
T 3t18_A 308 ILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMIPY-FGGFFTFIPTD---------KAFDIVKDLEKE 376 (413)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCC-CSSSCEEEECS---------CHHHHHHHHHHT
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCccCC-CceEEEEeCCC---------CHHHHHHHHHhC
Confidence 33333322 223345556677888888888886 6776543 333 3333331 345777888889
Q ss_pred CcEEEeeccccCCeEE-EEecCCCCHHHHHHHHHHHH
Q psy852 721 GRLHMVPASQEQNDEV-FELQERKRKDDLAYKRSFFV 756 (891)
Q Consensus 721 G~~~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ 756 (891)
|+++..+ ...+ +++...++++.++++.++++
T Consensus 377 gv~v~~g-----~~~iRis~~~~~~~~~l~~l~~~l~ 408 (413)
T 3t18_A 377 NIFTIPS-----AKGIRVAICGVGEEKIPKLVQRLAF 408 (413)
T ss_dssp TEECEEC-----SSEEEECTTTSCGGGHHHHHHHHHH
T ss_pred CEEEecC-----CCceEEEEeeCCHHHHHHHHHHHHH
Confidence 9875433 3456 88775444444444444443
No 412
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=97.87 E-value=0.00032 Score=79.06 Aligned_cols=65 Identities=14% Similarity=-0.008 Sum_probs=51.2
Q ss_pred eEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 165 RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 165 ~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
++..++. .|+++|++.+++.. ..+.+|+++-.++.+|.+-| +++|.++|++||++|++|.+++|+
T Consensus 181 ~~~~~~~-----~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~ 249 (434)
T 2epj_A 181 LTLVTPY-----NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF 249 (434)
T ss_dssp TEEEEET-----TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT
T ss_pred ceEecCC-----CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce
Confidence 3555654 28999999997531 12567777777777999888 999999999999999999999764
No 413
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=97.85 E-value=0.0006 Score=77.77 Aligned_cols=167 Identities=14% Similarity=0.046 Sum_probs=91.5
Q ss_pred CHHHHHHHHHHHhcCCCCCccccChhHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCc
Q psy852 29 SYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQS 108 (891)
Q Consensus 29 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~g~~~~~~~~~~~~~g~~tp~~~~~~~~~~~t~~~~~~~ 108 (891)
..|.++..+...+-......+...+ .+...+..++|+++++.+... -+ .+
T Consensus 81 ~~p~v~~A~~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~~~--------~v--------------------~~ 130 (453)
T 4ffc_A 81 SHPAVAAAIADQATHFTHTCFMVTP--YEQYVQVAELLNALTPGDHDK--------RT--------------------AL 130 (453)
T ss_dssp TCHHHHHHHHHHHHHCSCCTTTTSC--CHHHHHHHHHHHHHSSCSSCE--------EE--------------------EE
T ss_pred CCHHHHHHHHHHHHhccccccCcCC--CHHHHHHHHHHHHhCCCCCCc--------EE--------------------EE
Confidence 3566666655544221111111122 345556678889988643210 00 14
Q ss_pred ccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcC-------------CeEEEEecC---
Q psy852 109 LGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF-------------VRLKILEPD--- 172 (891)
Q Consensus 109 ~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~-------------~~v~~V~~d--- 172 (891)
++||+.. +...+.++|...+ .+.+|.....-|-...-++.+.+ ..+..++..
T Consensus 131 ~~sGseA-~~~alk~a~~~~g-----------~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (453)
T 4ffc_A 131 FNSGAEA-VENAIKVARLATG-----------RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPL 198 (453)
T ss_dssp ESSHHHH-HHHHHHHHHHHHC-----------CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTT
T ss_pred eCcHHHH-HHHHHHHHHHhcC-----------CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence 6788765 4445556665321 12234455555655544443322 156677764
Q ss_pred --CCCcccHHHHHH---HHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCCc
Q psy852 173 --DKNSLRGATLRQ---VMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 173 --~~g~id~~~L~~---~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+.|....+.++. .+++.. ....+.+|++.-.+++.|.+-| +++|+++|++||++|++|-+|.|+.
T Consensus 199 ~~~~g~~~~~~~~~~~~~l~~~i-~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g 272 (453)
T 4ffc_A 199 RDEPGLTGEEAARRAISRIETQI-GAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFA 272 (453)
T ss_dssp TSCTTCCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred cCccccchHHHHHHHHHHHHHhc-CCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCC
Confidence 223222233332 222211 1123567777777777788876 9999999999999999999997653
No 414
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=97.84 E-value=0.00042 Score=78.93 Aligned_cols=71 Identities=11% Similarity=-0.062 Sum_probs=54.7
Q ss_pred eEEEEecCC--CC--------cccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceee
Q psy852 165 RLKILEPDD--KN--------SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHV 230 (891)
Q Consensus 165 ~v~~V~~d~--~g--------~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHv 230 (891)
.+..+|.++ .. ..++++|++.+++. +..+.+|+++-.++++|.+-| +++|+++|++||+++++
T Consensus 194 ~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 270 (449)
T 2cjg_A 194 PRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIF 270 (449)
T ss_dssp CEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEE
Confidence 567777655 22 47888899988642 122567777777788998777 99999999999999999
Q ss_pred eccccCCc
Q psy852 231 DGAYAGSS 238 (891)
Q Consensus 231 DaA~GG~~ 238 (891)
|.+|.|+.
T Consensus 271 DEv~~g~g 278 (449)
T 2cjg_A 271 DEVQTGCG 278 (449)
T ss_dssp ECTTTTTT
T ss_pred eccccCCC
Confidence 99997643
No 415
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=97.82 E-value=0.00028 Score=79.47 Aligned_cols=153 Identities=8% Similarity=-0.055 Sum_probs=85.0
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQK 661 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~ 661 (891)
.|.++++ |.+++...+|+++.+++ +.+.+....... + .. +-....+.+.+.+..+.... ++
T Consensus 261 ~di~t~s--K~~~~G~~iG~~~~~~~--~~~~~~~~~~~~-~---------~~----t~~~~~~a~aaa~aal~~~~-~~ 321 (429)
T 3k28_A 261 PDLTCLG--KVIGGGLPVGAYGGKAE--IMRQVAPSGPIY-Q---------AG----TLSGNPLAMAAGYETLVQLT-PE 321 (429)
T ss_dssp CSEEEEC--GGGGTTSCCEEEEECHH--HHTTBTTTSSBC-C---------CC----TTTTCHHHHHHHHHHHHTCC-HH
T ss_pred Cceehhh--hhhcCCCCeEEEEEcHH--HHhhhccCCCcc-c---------cC----CCCCChHHHHHHHHHHHHHH-HH
Confidence 4677665 98887788899887653 222221100000 0 00 11122344555555554322 66
Q ss_pred HHHHHHHHHHHHHHHhccC----CCcEEeCCCceeEEEEEecCCcch-------hhhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 662 YIRRHCELAKLFEGKVRRD----PRFEISNDVRLGLVCFRLRSENNL-------IADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~~~----~~~eil~~~~~~iV~Fr~~~~~~~-------~~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
.+++..++.+++.+.|++. +.+..+ +...+.+.|.+...... .-......+.+.|.++|+++.. .
T Consensus 322 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~-~-- 397 (429)
T 3k28_A 322 SYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQGVFLPP-S-- 397 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCS-S--
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEecCCcccccccccccHHHHHHHHHHHHHCCeEEec-C--
Confidence 7777788888888888663 322111 12335667776432100 0022346788889999977432 2
Q ss_pred cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 ~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+...+ + +..+|++|++++++.|++++.
T Consensus 398 -~~~~~r~--~~~~t~e~i~~~l~~l~~~l~ 425 (429)
T 3k28_A 398 -QFEGLFL--STVHSDADIEATIAAAEIAMS 425 (429)
T ss_dssp -TTSCBCC--CTTCCHHHHHHHHHHHHHHHH
T ss_pred -CCCCEEE--ECCCCHHHHHHHHHHHHHHHH
Confidence 12223 4 346799999999999998763
No 416
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=97.82 E-value=3.2e-06 Score=95.21 Aligned_cols=278 Identities=11% Similarity=0.043 Sum_probs=172.2
Q ss_pred HHHHHHHHH-HHHHhhccCCccccccCC-CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHH
Q psy852 442 IRRHCELAK-LFEGKVRRDPRFEISNDV-RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCV 519 (891)
Q Consensus 442 i~~~lelAr-~l~~~L~~~~~~eVv~~i-tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv 519 (891)
..+.++.++ .+++.|...+..+|+ + |+|+|+++..++... .+ .| ..-.++.++..+|.++
T Consensus 70 ~~~~~~~ar~~la~ll~~~~~~evi--f~t~~~T~a~n~ai~~l----~~----------~g--d~v~~~~~~~~~~~~~ 131 (386)
T 3qm2_A 70 FIQVAEEAEQDFRDLLNIPSNYKVL--FCHGGGRGQFAGVPLNL----LG----------DK--TTADYVDAGYWAASAI 131 (386)
T ss_dssp ---CCHHHHHHHHHHHTCCTTEEEE--EEESCTTHHHHHHHHHH----CT----------TC--CEEEEEESSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEE--EEcCCchHHHHHHHHhc----cC----------CC--CeEEEEeCCHHHHHHH
Confidence 345555665 566666663345777 6 689999998887543 11 01 0112455666667555
Q ss_pred HHHHHHcCceEEEecCC--CCCC-cCHHHHHHHHHhhhhcCCccEEEEec--CCcc-c-----h---hhhhcCC------
Q psy852 520 EKAAMMAFVRLKILEPD--DKNS-LRGATLRQVMQQDETMGYIPFFVSTT--LGTT-S-----C---YRKSQGI------ 579 (891)
Q Consensus 520 ~Kaa~l~gv~v~~Vp~d--~~G~-mD~~~Le~aI~~d~~~g~ip~~Vvat--aGTT-~-----c---~~~ldGi------ 579 (891)
..+.+. | +++.||++ ++|. +++++++++|+++++ ..+++.++ .|+. . + .-++|++
T Consensus 132 ~~a~~~-G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~---lV~~~h~et~tG~~i~pi~~i~~g~~~~vDa~qs~g~~ 206 (386)
T 3qm2_A 132 KEAKKY-C-APQIIDAKITVDGKRAVKPMREWQLSDNAA---YLHYCPNETIDGIAIDETPDFGPEVVVTADFSSTILSA 206 (386)
T ss_dssp HHHTTT-S-EEEEEECEEEETTEEEECCGGGCCCCTTCS---CEEECSEETTTTEECCCCCCCCTTCCEEEECTTTTTSS
T ss_pred HHHHHh-C-CeEEEecCcccCCCCCCchHHHhhcCCCCc---EEEEECCcCCcCEecCchhhhcCCCEEEEEcccccCCC
Confidence 443333 5 89999998 7886 899888887776533 23333333 3774 3 2 1134543
Q ss_pred ----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccc----c-ccchHHHHH
Q psy852 580 ----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSR----R-FRSLKLWFV 650 (891)
Q Consensus 580 ----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SR----r-~~aL~lW~~ 650 (891)
+..|-+.+++|||++ |.|+|++++|++.. ...-...+.++. +....-...| . ...+.+-.+
T Consensus 207 pidv~~~~~~~~s~hK~lG-P~G~g~l~v~~~~~-~~~~~~~p~~~~--------~~~~~~~~~~~gTp~v~~i~~l~~A 276 (386)
T 3qm2_A 207 PLDVSRYGVIYAGAQKNIG-PAGLTLVIVREDLL-GKAHESCPSILD--------YTVLNDNDSMFNTPPTFAWYLSGLV 276 (386)
T ss_dssp CCCGGGCSEEEEETTTTTC-CTTEEEEEEEGGGC-SCCCTTSCGGGC--------HHHHHHC-------CCSHHHHHHHH
T ss_pred CCCccccCEEEEecccccC-CCccEEEEECHHHH-hhhcccCCcHHH--------HHHHhhcCCCCCCCcHHHHHHHHHH
Confidence 223678899999996 99999999997731 111001111211 0000000111 1 123456667
Q ss_pred HHHHHHh-hHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC--c-eeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe
Q psy852 651 IRTYGLS-GLQKYIRRHCELAKLFEGKVRRDPRFEISNDV--R-LGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV 726 (891)
Q Consensus 651 L~~lG~~-G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~--~-~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s 726 (891)
++.+-.. |++++.++..+++++|.+.|++++-+....++ . .++|+|.+++. .....+...|.+.|+....
T Consensus 277 l~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~------~~~~~~~~~L~~~gI~~~~ 350 (386)
T 3qm2_A 277 FKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADN------TLDKVFLEESFAAGLHALK 350 (386)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSG------GGHHHHHHHHHHTTEECCB
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCc------cccHHHHHHHHHCCCEEeC
Confidence 7777777 89999999999999999999987422333222 2 36999999742 1235677778889987444
Q ss_pred eccccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 727 PASQEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 727 ~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+-...+ .+ +|+++++|++|||+++++|+++.+
T Consensus 351 g~~~~~--~iRiS~~~~~t~edId~l~~~l~~~~~ 383 (386)
T 3qm2_A 351 GHRVVG--GMRASIYNAMPIEGVKALTDFMIDFER 383 (386)
T ss_dssp CCTTTC--SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCcC--eEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 333222 26 999999999999999999998763
No 417
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=97.81 E-value=0.00012 Score=82.03 Aligned_cols=245 Identities=9% Similarity=0.003 Sum_probs=138.0
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC--CCCCC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP--DDKNS 540 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~--d~~G~ 540 (891)
+|+ +|+|+++++..++..... .. +.-.|+++.-.|.+....+...|.+++.+|. ++++.
T Consensus 119 ~i~--~t~G~t~al~~~~~~~~~--~~---------------~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 179 (420)
T 4f4e_A 119 VTA--QALGGTGALKIGADFLRT--LN---------------PKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNG 179 (420)
T ss_dssp EEE--EEEHHHHHHHHHHHHHHH--HC---------------TTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTE
T ss_pred EEE--ECCccHHHHHHHHHHHHH--hC---------------CCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCc
Confidence 556 788999999888543221 11 1124778888899998888889999999998 45799
Q ss_pred cCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hc---------------------CCC
Q psy852 541 LRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQ---------------------GIE 580 (891)
Q Consensus 541 mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ld---------------------Gi~ 580 (891)
+|+++|+++|++... +...+++. +..|++. |.++ +| +..
T Consensus 180 ~d~~~l~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 258 (420)
T 4f4e_A 180 VNFDGMLAALNGYEP-GTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAAN 258 (420)
T ss_dssp ECHHHHHHHHTTCCT-TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTT
T ss_pred cCHHHHHHHHHhCCC-CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcC
Confidence 999999999975311 11222221 3356553 3321 11 112
Q ss_pred CccEEEEcCcccCCcc-cccEEEEEe--CCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH--
Q psy852 581 YADSFNVNVNKWLLTA-FDSSCLWVA--DRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG-- 655 (891)
Q Consensus 581 ~aDSIs~d~HK~L~~P-~g~G~llvR--~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG-- 655 (891)
.-+-+..+.+|.++.| ..+|++++. +++.+......-..+.+... .. ...+.++.+...+.
T Consensus 259 ~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-----~~~~~~~~~~~~l~~~ 324 (420)
T 4f4e_A 259 LNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNY---------SN-----PPTHGGAIVAAVLASP 324 (420)
T ss_dssp CCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTT---------SS-----CCSHHHHHHHHHHHCH
T ss_pred CCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhccc---------CC-----CCHHHHHHHHHHhcCH
Confidence 2345667899998843 558888752 33222111110000000000 00 01122222222222
Q ss_pred ------HhhHHHHHHHHHHHHHHHHHHhccC---CCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe
Q psy852 656 ------LSGLQKYIRRHCELAKLFEGKVRRD---PRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV 726 (891)
Q Consensus 656 ------~~G~~~~i~~~~~lA~~L~~~L~~~---~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s 726 (891)
.+.++++.++..++++++.+.|++. +++++..+ ..+..+| .+. ..+.+...|.+.|+++..
T Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~--~~~-------~~~~~~~~l~~~gI~v~~ 394 (420)
T 4f4e_A 325 ELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINA-QRGMFSY--SGL-------TSAQVDRLREEFGIYAVS 394 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHH-SCSSEEE--CCC-------CHHHHHHHHHHHCEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECC-CccEEEE--eCC-------CHHHHHHHHHhCCEEecC
Confidence 2345677777888999999999886 35655432 2333322 221 123456667778876332
Q ss_pred eccccCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy852 727 PASQEQNDEVFELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 727 ~s~~~g~~~l~sv~~~tT~edId~li~~L~ei~ 759 (891)
+ + .+++... ++++|+++++.|++++
T Consensus 395 ~----~---Ris~~~~-~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 395 T----G---RICVAAL-NTRNLDVVANAIAAVL 419 (420)
T ss_dssp T----S---EEEGGGC-CTTTHHHHHHHHHHHH
T ss_pred C----C---eEEEecC-CHHHHHHHHHHHHHHh
Confidence 1 1 3666533 5667999999998764
No 418
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=97.77 E-value=0.00049 Score=78.44 Aligned_cols=219 Identities=9% Similarity=0.037 Sum_probs=126.9
Q ss_pred HHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecc-cchHHHH---------
Q psy852 451 LFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSK-EAHSCVE--------- 520 (891)
Q Consensus 451 ~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~-~aH~Sv~--------- 520 (891)
.+++.+.... .++.+.+++|+++|..++.+. .+ +.-.|+++. ..|....
T Consensus 81 ~lA~l~g~e~--alv~p~~~sGt~Ai~~al~al----l~---------------pGD~Vl~~~~~~y~~~~~~~g~~~~~ 139 (427)
T 3i16_A 81 VYARVFNTES--ALVRPHFVNGTHALGAALFGN----LR---------------PGNTMLSVCGEPYDTLHDVIGITENS 139 (427)
T ss_dssp HHHHHHTCSE--EEEETTCCSHHHHHHHHHHHH----CC---------------TTCEEEESSSSCCGGGHHHHTCSCCC
T ss_pred HHHHHhCCcc--eEEeCCCccHHHHHHHHHHHH----hC---------------CCCEEEEeCCCccHHHHHHHhccccc
Confidence 4555554422 244332678899988777652 10 112356665 5565444
Q ss_pred --HHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCC-------ccc--------hhh--h-----h
Q psy852 521 --KAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLG-------TTS--------CYR--K-----S 576 (891)
Q Consensus 521 --Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataG-------TT~--------c~~--~-----l 576 (891)
+.+...|++++.+|.+++|.+|+++|+++|++.. +...+++..+.| +.. |++ + +
T Consensus 140 ~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~--~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~liv 217 (427)
T 3i16_A 140 NMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDE--SITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFV 217 (427)
T ss_dssp SSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCT--TEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred hHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCC--CCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEE
Confidence 3344568899999999999999999999998310 112333333222 211 444 2 2
Q ss_pred c-----CC-------CCccEEEEcCcccCCccc--ccEEEEEeCCccchhhhcc--CCCccccCCCCCccccCCcccccc
Q psy852 577 Q-----GI-------EYADSFNVNVNKWLLTAF--DSSCLWVADRYKLTSALVV--DPLYLQHGHEGAIDYRHWGIPLSR 640 (891)
Q Consensus 577 d-----Gi-------~~aDSIs~d~HK~L~~P~--g~G~llvR~~~~L~~~l~~--~~~Yl~~~~e~~~~~~~~ti~~SR 640 (891)
| +. ..+|.++.++||+++++- ..|+++.+ ++.+. .+.. ....+ +...+
T Consensus 218 D~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~-~l~~~~~~~~~-------------g~~~~- 281 (427)
T 3i16_A 218 DNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIE-KTSYRLTVPGI-------------GGECG- 281 (427)
T ss_dssp ECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHH-HHHHHHSCTTT-------------GGGCC-
T ss_pred ECCCccccccCCccccCCeEEEecCcccCCCCCCceEEEEEEC-HHHHH-HHHHhcccCcc-------------CccCC-
Confidence 2 22 248999999999998742 22666654 33322 2211 11110 10000
Q ss_pred cccchH-HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCcee-----EEEEEecCCcchhhhhhHHHHH
Q psy852 641 RFRSLK-LWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLG-----LVCFRLRSENNLIADQNNRKLL 714 (891)
Q Consensus 641 r~~aL~-lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-----iV~Fr~~~~~~~~~d~ln~~L~ 714 (891)
+ .+. .|..++ |..-+..++++..++++++++.|++++ +++... ... +++|.+.+ ++...++.
T Consensus 282 ~--~~~~a~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~g-~~V~p~-~~~~~~~~i~~i~l~~------~~~~~~f~ 349 (427)
T 3i16_A 282 S--TFGVVRSMYQ--GLFLAPHISMEALKGAILCSRIMELAG-FEVMPK-YDEKRSDIIQSIKFND------KDKLIEFC 349 (427)
T ss_dssp C--CTTCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEESC-TTSCCSSSCEEEECSS------HHHHHHHH
T ss_pred c--cHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCC-CeecCC-CCCCCccEEEEEEECC------HHHHHHHH
Confidence 1 011 355544 455567888999999999999999875 476422 333 88899852 34566788
Q ss_pred HHHHhC
Q psy852 715 EDINAS 720 (891)
Q Consensus 715 ~~L~~~ 720 (891)
+.|+..
T Consensus 350 ~~l~~~ 355 (427)
T 3i16_A 350 KGIQTG 355 (427)
T ss_dssp HHHHHT
T ss_pred HHHhhc
Confidence 888775
No 419
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=97.70 E-value=0.00059 Score=79.73 Aligned_cols=280 Identities=7% Similarity=0.025 Sum_probs=149.2
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC----CC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD----DK 538 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d----~~ 538 (891)
+|+ +++|+++++..++.+...+. ...+.-.|+++.-.|.+...++.+.+.+++.+|++ .+
T Consensus 166 ~i~--~t~G~t~al~~~~~~l~~~~--------------l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 229 (533)
T 3f6t_A 166 DLF--PTEGGTAAIVYAFHSLAENH--------------LLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKND 229 (533)
T ss_dssp EEE--EEEHHHHHHHHHHHHHHHTT--------------SSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTT
T ss_pred eEE--EECCHHHHHHHHHHHhhhhh--------------ccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccC
Confidence 566 68899999988876532211 11223468889999999988888888888888874 46
Q ss_pred CCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hh-hh-----hcC---------------CCCcc
Q psy852 539 NSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CY-RK-----SQG---------------IEYAD 583 (891)
Q Consensus 539 G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~-~~-----ldG---------------i~~aD 583 (891)
+.+|+++|++++++.+ ..++++. ..|++. |. ++ +|. ....+
T Consensus 230 ~~~d~~~l~~~l~~~~----k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 305 (533)
T 3f6t_A 230 WEIEPNEIEKLKDPSI----KALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNT 305 (533)
T ss_dssp SEECHHHHHHHSCTTE----EEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGE
T ss_pred CCCCHHHHHHHhCCCC----eEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCE
Confidence 8999999999986532 1223322 245543 43 21 111 11234
Q ss_pred EEEEcCcccCCcc-cccEEEEEeCCccchhhhccCC---------CccccCCCC-Ccc--------ccCCcccccccccc
Q psy852 584 SFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDP---------LYLQHGHEG-AID--------YRHWGIPLSRRFRS 644 (891)
Q Consensus 584 SIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~---------~Yl~~~~e~-~~~--------~~~~ti~~SRr~~a 644 (891)
-+..+.+|.++.| .-+|+++.++...+.+.+..-+ .|-.-..++ ... ........+-....
T Consensus 306 i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~ 385 (533)
T 3f6t_A 306 MLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLST 385 (533)
T ss_dssp EEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCH
T ss_pred EEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCCh
Confidence 7788899988844 3389998887744332221110 010000000 000 00000000000111
Q ss_pred hHHHH----HHHHH--------HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCcee-EEEEEecCCcchhh-----
Q psy852 645 LKLWF----VIRTY--------GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLG-LVCFRLRSENNLIA----- 706 (891)
Q Consensus 645 L~lW~----~L~~l--------G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-iV~Fr~~~~~~~~~----- 706 (891)
..+.+ ++..+ ...-+++..+...+.+++|.+.|. . ++.+. .++.+ .+...+........
T Consensus 386 ~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~-~~~~g~~~~~~l~~~~~~~~g~~~~ 462 (533)
T 3f6t_A 386 PQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A-PKDET-DTNTHYYSLIDIYRLAEKIYGKEFR 462 (533)
T ss_dssp HHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCS-TTBCCSEEEEEHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C-Ccccc-CCCceEEEEEehHhhhhhccchHHH
Confidence 22222 33333 123455566667778888999986 4 34433 33333 34444432100000
Q ss_pred -----hhhHHHHHHHH-HhCCcEEEeecccc-CCeEE-EEecCCCCHHHHHHHHHHHHHHHHHHHHhh
Q psy852 707 -----DQNNRKLLEDI-NASGRLHMVPASQE-QNDEV-FELQERKRKDDLAYKRSFFVRMLGLVCFRL 766 (891)
Q Consensus 707 -----d~ln~~L~~~L-~~~G~~~~s~s~~~-g~~~l-~sv~~~tT~edId~li~~L~ei~~~~~~~l 766 (891)
+....++..+| .+.|+++..+..+. +...+ +++.. .++++|+++++.|.+++..+...+
T Consensus 463 ~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~-~~~e~i~~~i~~L~~~l~~~~~~~ 529 (533)
T 3f6t_A 463 DYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQAN-LPTEDYALIGKQVLELLKEYYEEF 529 (533)
T ss_dssp HHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSS-SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEee-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 01223444444 56788754333221 23456 88854 478899999999998886544333
No 420
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=97.67 E-value=0.00036 Score=78.43 Aligned_cols=151 Identities=7% Similarity=0.012 Sum_probs=93.4
Q ss_pred ccEEEEcCcccCC-cccccEEEEEeCCccc------hhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH
Q psy852 582 ADSFNVNVNKWLL-TAFDSSCLWVADRYKL------TSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY 654 (891)
Q Consensus 582 aDSIs~d~HK~L~-~P~g~G~llvR~~~~L------~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l 654 (891)
.+-+..+++|.++ ....+|+++.++.... ...+.....+ ... ....+.+.+++..+
T Consensus 261 ~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~---~~~~~~~~a~~~~l 323 (432)
T 3ei9_A 261 VAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICT--------------CFN---GASNISQAGALACL 323 (432)
T ss_dssp TEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHH--------------SCC---CSCHHHHHHHHHHS
T ss_pred eEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhcc--------------ccC---CCCHHHHHHHHHHH
Confidence 4567789999997 4466898888765310 1111100000 000 01123333333333
Q ss_pred ---HHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHh-CCcEEEeeccc
Q psy852 655 ---GLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINA-SGRLHMVPASQ 730 (891)
Q Consensus 655 ---G~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~-~G~~~~s~s~~ 730 (891)
+.+.+.+..++..++++++.+.|++. ++++..+.....+++.+.+. ...++.+.|.+ .|+++..+...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ll~~~gv~v~~g~~f 395 (432)
T 3ei9_A 324 TPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHFPNQ-------SSWDVFAEILEKTHVVTTPGSGF 395 (432)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGG
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEEECCCC-------CHHHHHHHHHHHCCEEEeCchHh
Confidence 34556778888889999999999887 78777655666788888632 34567777765 48875544432
Q ss_pred --cCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 731 --EQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 731 --~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
.+...+ +++ .+++++|+++++.|++.-
T Consensus 396 ~~~~~~~iRis~--~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 396 GPGGEGFVRVSA--FGHRENILEACRRFKQLY 425 (432)
T ss_dssp CGGGTTEEEEEC--CSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEe--cCCHHHHHHHHHHHHHHh
Confidence 234566 886 458999999999888654
No 421
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=97.65 E-value=0.0012 Score=74.17 Aligned_cols=264 Identities=11% Similarity=0.046 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHH
Q psy852 444 RHCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAA 523 (891)
Q Consensus 444 ~~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa 523 (891)
...++++.+.+.+.. +. +++ +++||+|+|..++..+|... + +.-+|.....-|-....++
T Consensus 94 ~~~~la~~l~~~~~~-~~-~v~--~~~sGsea~~~al~~a~~~~-~---------------~~~ii~~~~~yhg~~~~~~ 153 (429)
T 4e77_A 94 MEVKMAQLVTDLVPT-MD-MVR--MVNSGTEATMSAIRLARGYT-G---------------RDKIIKFEGCYHGHADCLL 153 (429)
T ss_dssp HHHHHHHHHHHHSTT-CS-EEE--EESSHHHHHHHHHHHHHHHH-C---------------CCEEEEETTCCCC------
T ss_pred HHHHHHHHHHhhCCC-CC-EEE--EeCcHHHHHHHHHHHHHHhh-C---------------CCEEEEEcCccCCCChhhh
Confidence 445667777776652 22 455 78899999999999887532 0 1223444444554443222
Q ss_pred HHcC-------------c------eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec----CCccc---------
Q psy852 524 MMAF-------------V------RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT----LGTTS--------- 571 (891)
Q Consensus 524 ~l~g-------------v------~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat----aGTT~--------- 571 (891)
...+ + .+..+|.+ |+++|+++|++... .+.++++.. .|...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~--~~~~vi~ep~~~~~g~~~~~~~~l~~l 226 (429)
T 4e77_A 154 VKAGSGALTLGQPNSPGVPTDFAKHTLTCTYN-----DLASVRQAFEQYPQ--EVACIIVEPVAGNMNCIPPLPEFLPGL 226 (429)
T ss_dssp ------------CCCTTSCGGGGTTEEEECTT-----CHHHHHHHHHHSTT--TEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred hhcCCcccccCCCCcCCCCCccCCceeecCCC-----CHHHHHHHHHhcCC--CEEEEEECCccCCCCCcCCCHHHHHHH
Confidence 1111 0 12222221 78899988875311 122233221 22221
Q ss_pred ---hhhh-----hcC----C------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccC-CCccccCCC
Q psy852 572 ---CYRK-----SQG----I------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD-PLYLQHGHE 626 (891)
Q Consensus 572 ---c~~~-----ldG----i------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~-~~Yl~~~~e 626 (891)
|.++ +|. + -..|.++++ |.+++.++.|+++.+++ +.+.+... ..+..
T Consensus 227 ~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~--~~~~l~~~~~~~~~---- 298 (429)
T 4e77_A 227 RALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLTCLG--KIIGGGMPVGAFGGRRE--VMNALAPTGPVYQA---- 298 (429)
T ss_dssp HHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEEEEE--GGGGTTSCCEEEEECHH--HHTTBTTTSSBCC-----
T ss_pred HHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCeeeec--ccccCCCCeEEEEECHH--HHHHhccCCCcccc----
Confidence 3321 111 0 113766665 98887778898877543 22211110 00000
Q ss_pred CCccccCCcccccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC----CCcEEeCCCceeEEEEEecCCc
Q psy852 627 GAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD----PRFEISNDVRLGLVCFRLRSEN 702 (891)
Q Consensus 627 ~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~----~~~eil~~~~~~iV~Fr~~~~~ 702 (891)
..+ ....+.+.+.+..+....-.+.+++..++.+++.+.|++. +.... .+...+++.|.+.+..
T Consensus 299 -----~t~------~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~~~~~~~~~~~ 366 (429)
T 4e77_A 299 -----GTL------SGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLV-VNHVGGMFGLFFTNAD 366 (429)
T ss_dssp ------CC------CCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCE-EEEETTEEEEECCSSS
T ss_pred -----CCC------CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceE-EEEeeeEEEEEEccCc
Confidence 001 1122333333333321111344555666666666666542 22111 1123457777775431
Q ss_pred c-h-------hhhhhHHHHHHHHHhCCcEEEeeccccCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy852 703 N-L-------IADQNNRKLLEDINASGRLHMVPASQEQNDEVFELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 703 ~-~-------~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l~sv~~~tT~edId~li~~L~ei~ 759 (891)
. . .-......+.+.|.++|+++..+. ... +.++..+|++|++++++.|++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~-~~~~~~~t~e~i~~~l~~l~~~l 426 (429)
T 4e77_A 367 TVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA----FEA-GFMSLAHSNEDIQKTVNAARRCF 426 (429)
T ss_dssp CCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST----TSC-EECCTTCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHHHHCCeEEeecC----CCC-EEEeccCCHHHHHHHHHHHHHHH
Confidence 0 0 001234678889999998743221 111 34456789999999999999876
No 422
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=97.65 E-value=0.00027 Score=78.71 Aligned_cols=245 Identities=11% Similarity=0.040 Sum_probs=136.7
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCce-EEEecCC--CCCCcCHHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVR-LKILEPD--DKNSLRGAT 545 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~-v~~Vp~d--~~G~mD~~~ 545 (891)
++|+++++..++..++.. .. |.....-.|++..-+|.+...++...|.+ ++.+|.+ .++.+|+++
T Consensus 105 t~gg~~a~~~~~~~~~~~--~~----------g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 172 (412)
T 1ajs_A 105 SLGGTGALRIGAEFLARW--YN----------GTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQG 172 (412)
T ss_dssp EEHHHHHHHHHHHHHHHH--SS----------SSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHH
T ss_pred CCCcHHHHHHHHHHHHHh--Cc----------CcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHH
Confidence 889999999886544321 10 00000024677777888888888888888 9999984 668899999
Q ss_pred HHHHHHhhhhcCCccEEEEe----cCCccc-----------hhhh-----h---------cC-------CC----Ccc--
Q psy852 546 LRQVMQQDETMGYIPFFVST----TLGTTS-----------CYRK-----S---------QG-------IE----YAD-- 583 (891)
Q Consensus 546 Le~aI~~d~~~g~ip~~Vva----taGTT~-----------c~~~-----l---------dG-------i~----~aD-- 583 (891)
|++++++.. ....++++. ..|+.. |.++ + .| +. ..|
T Consensus 173 l~~~l~~~~--~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (412)
T 1ajs_A 173 FLSDLENAP--EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFEL 250 (412)
T ss_dssp HHHHHHHSC--TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCE
T ss_pred HHHHHHhCC--CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcE
Confidence 999997631 112233222 245542 3321 1 11 10 123
Q ss_pred EEEEcCcccCCcc-cccEEEEEe--CCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH-----
Q psy852 584 SFNVNVNKWLLTA-FDSSCLWVA--DRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG----- 655 (891)
Q Consensus 584 SIs~d~HK~L~~P-~g~G~llvR--~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG----- 655 (891)
-+..+.||.++.| ..+|++++. +++.+......-..+... +... ...+.+++....+.
T Consensus 251 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~---~~~~~~~a~~~~l~~~~~~ 316 (412)
T 1ajs_A 251 FCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRV-----------TWSN---PPAQGARIVARTLSDPELF 316 (412)
T ss_dssp EEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHT-----------TTSS---CCSHHHHHHHHHHHSHHHH
T ss_pred EEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhc-----------ccCC---CChHHHHHHHHHHcCcchh
Confidence 5578999987752 347999883 433211111000000000 0000 01223333333332
Q ss_pred ---HhhHHHHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc
Q psy852 656 ---LSGLQKYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS 729 (891)
Q Consensus 656 ---~~G~~~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~ 729 (891)
.+.+++..++..++++++.+.|++.. ++++.. +..+...|. +. + .+.+...|.+.|+++. +.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~-----~--~~~~~~~l~~~gv~v~-~~- 384 (412)
T 1ajs_A 317 HEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHIT-DQIGMFSFT--GL-----N--PKQVEYLINQKHIYLL-PS- 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHH-HCCSSEEEC--CC-----C--HHHHHHHHHTTCEECC-TT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEc-CCCceEEEe--CC-----C--HHHHHHHHHhCCEEec-CC-
Confidence 23567777788889999999998864 465543 233333321 21 1 2344555667887632 21
Q ss_pred ccCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy852 730 QEQNDEVFELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 730 ~~g~~~l~sv~~~tT~edId~li~~L~ei~ 759 (891)
..++++. +++++++++++.|++++
T Consensus 385 -----~Ris~~~-~~~~~i~~~~~~l~~~l 408 (412)
T 1ajs_A 385 -----GRINMCG-LTTKNLDYVATSIHEAV 408 (412)
T ss_dssp -----SEEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred -----cEEEeee-CCHHHHHHHHHHHHHHH
Confidence 1377763 48999999999998876
No 423
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=97.64 E-value=0.001 Score=76.39 Aligned_cols=122 Identities=11% Similarity=0.098 Sum_probs=74.2
Q ss_pred cccchhHHHHHHHHHHHHhccccCCccccccccCCeEEEecCCCChHHHHHHHHcCC-----------eEEEEecCC---
Q psy852 108 SLGGGVIQSVQNIIVLTRGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFV-----------RLKILEPDD--- 173 (891)
Q Consensus 108 ~~~gGt~~~~~~~~~~ar~~~~~~~~~~~g~~~~~~~v~~S~~~H~Sv~kaa~~~~~-----------~v~~V~~d~--- 173 (891)
++.||++. +...+.++|..... .|.-..+-+|.....=|-+..-++.+++. .+..++...
T Consensus 121 ~~~sGseA-~~~aik~a~~~~~~-----~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~ 194 (472)
T 3hmu_A 121 FAGGGSEA-NDTNIRMVRTYWQN-----KGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWA 194 (472)
T ss_dssp EESSHHHH-HHHHHHHHHHHHHH-----TTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHH
T ss_pred EeCCHHHH-HHHHHHHHHHHHHh-----cCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCcccc
Confidence 45688754 55555666653110 01101223444444556554444433321 455666422
Q ss_pred --CCccc--------HHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCCc
Q psy852 174 --KNSLR--------GATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 174 --~g~id--------~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
++ +| +++|++.|++.. ...+.+|++.-.++..|.+-| +++|.++|+++|++|.+|-++.|+.
T Consensus 195 ~~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfg 270 (472)
T 3hmu_A 195 EGGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFG 270 (472)
T ss_dssp HCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred CCcc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCc
Confidence 22 34 788888887421 122567777777788899988 9999999999999999999997754
No 424
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.64 E-value=8.6e-05 Score=80.28 Aligned_cols=273 Identities=12% Similarity=0.069 Sum_probs=171.2
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHH--HHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVE--KAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~--Kaa~ 524 (891)
++.+.+++.+...+. +++ +++|+++++..++.+... +.-.|+++..+|++.. +.+.
T Consensus 38 ~l~~~la~~~g~~~~-~i~--~~~g~t~a~~~~~~~~~~-------------------~gd~vl~~~~~~~~~~~~~~~~ 95 (352)
T 1iug_A 38 KARGLLREAFRTEGE-VLI--LTGSGTLAMEALVKNLFA-------------------PGERVLVPVYGKFSERFYEIAL 95 (352)
T ss_dssp HHHHHHHHHHTCSSE-EEE--EESCHHHHHHHHHHHHCC-------------------TTCEEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCc-eEE--EcCchHHHHHHHHHhccC-------------------CCCeEEEEeCCchhHHHHHHHH
Confidence 344455555554332 455 678999999988876521 1125888888898865 3334
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc--------hhhh-------hcCC-------
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS--------CYRK-------SQGI------- 579 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~--------c~~~-------ldGi------- 579 (891)
..|.+++.+|.+.++.+|+++|++ + +...++++ +..|+.. |+++ +|++
T Consensus 96 ~~g~~~~~v~~~~~~~~d~~~l~~---~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~ 168 (352)
T 1iug_A 96 EAGLVVERLDYPYGDTPRPEDVAK---E----GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGE 168 (352)
T ss_dssp HTTCEEEEEECCTTCCCCTTTSCC---S----SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBC
T ss_pred HcCCceEEEeCCCCCCCCHHHHhc---c----CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcc
Confidence 468899999999889999998876 2 11122222 2235543 4443 2321
Q ss_pred ---C--CccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCcc-ccCCccccccc-ccchHHHHHHH
Q psy852 580 ---E--YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAID-YRHWGIPLSRR-FRSLKLWFVIR 652 (891)
Q Consensus 580 ---~--~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~-~~~~ti~~SRr-~~aL~lW~~L~ 652 (891)
. .+|.+++++|||+++|.|+|+++++++. + +.+.....|+.-. .... .......++-. .....+..+++
T Consensus 169 ~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~-~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~al~ 244 (352)
T 1iug_A 169 VALEAMGVDAAASGSQKGLMCPPGLGFVALSPRA-L-ERLKPRGYYLDLA--RELKAQKEGESAWTPAINLVLAVAAVLE 244 (352)
T ss_dssp CCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHH-H-HTCCCCSSTTCHH--HHHHHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred eeccccCeeEEEecCcccccCCCceeEEEECHHH-H-HHhhCCCceeeHH--HHHhhcccCCCCCCCCHHHHHHHHHHHH
Confidence 1 3799999999999999999999987652 1 1111100010000 0000 00000001111 11123445555
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecccc
Q psy852 653 TYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV-RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQE 731 (891)
Q Consensus 653 ~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~ 731 (891)
.+... +++..++..++++++.+.|++. +++++.+. ..++++|++++. ....++.+.|.++|+.+..+....
T Consensus 245 ~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~gi~v~~~~~~~ 316 (352)
T 1iug_A 245 EVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEG------VPYARVKEAFAQRGAVIAGGQGPL 316 (352)
T ss_dssp HHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTT------CCHHHHHHHHHTTTEECEECCGGG
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCC------CCHHHHHHHHHHCCEEEEeCCCcc
Confidence 54444 8888899999999999999987 88887654 457888988521 134678889988998755444333
Q ss_pred CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+...+ ++++..+|++|++++++.|+++..
T Consensus 317 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 346 (352)
T 1iug_A 317 KGKVFRLSLMGAYDRYEALGVAGMFREVLE 346 (352)
T ss_dssp TTTEEEECCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEccccCCHHHHHHHHHHHHHHHH
Confidence 44567 999988999999999999998763
No 425
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=97.61 E-value=0.00031 Score=78.93 Aligned_cols=155 Identities=8% Similarity=-0.056 Sum_probs=78.8
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQK 661 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~ 661 (891)
.|.++++ |.+++-+..|+++.+++ +.+.+.....+.. ..+. ....+.+.+.+..+....-++
T Consensus 260 ~di~t~s--K~~~~G~~~G~~~~~~~--~~~~~~~~~~~~~----------~~t~----~~~~~~~aa~~aal~~~~~~~ 321 (427)
T 3fq8_A 260 PDLTTLG--KIIGGGLPVGAYGGKRE--IMQLVAPAGPMYQ----------AGTL----SGNPLAMTAGIKTLELLRQPG 321 (427)
T ss_dssp CSEEEEC--GGGGTTSSCEEEEECHH--HHTTBTTTSSBCC----------CCTT----TTCHHHHHHHHHHHHHHTSTT
T ss_pred CChhhhh--hhhhCCcceEEEEEcHH--HHHhhccCCCccc----------cCCC----CcCHHHHHHHHHHHHHHHhcC
Confidence 4777776 98886566898877543 2222211000000 0011 112233333333332111134
Q ss_pred HHHHHHHHHHHHHHHhccC----CCcEEeCCCceeEEEEEecCCcch-------hhhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 662 YIRRHCELAKLFEGKVRRD----PRFEISNDVRLGLVCFRLRSENNL-------IADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~~~----~~~eil~~~~~~iV~Fr~~~~~~~-------~~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
..++..++.+++.+.|++. +..... +....++.|.+...... .-......+.+.|.++|+++..+..
T Consensus 322 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~- 399 (427)
T 3fq8_A 322 TYEYLDQITKRLSDGLLAIAQETGHAACG-GQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF- 399 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEE-EEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC-
Confidence 4555566666666666542 211111 12234677776532100 0122346788889999987432211
Q ss_pred cCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 EQNDEVFELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 ~g~~~l~sv~~~tT~edId~li~~L~ei~~ 760 (891)
. .++++..+|++||+++++.|++++.
T Consensus 400 ---~-r~~~~~~~t~e~i~~~l~~l~~~l~ 425 (427)
T 3fq8_A 400 ---E-AGFTSLAHTEEDIDATLAAARTVMS 425 (427)
T ss_dssp ---S-CEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ---C-CEEeeCcCCHHHHHHHHHHHHHHHH
Confidence 0 1555667899999999999998763
No 426
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=97.60 E-value=0.00017 Score=79.64 Aligned_cols=236 Identities=10% Similarity=0.025 Sum_probs=135.0
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCC--CCCCcCHHHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPD--DKNSLRGATL 546 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d--~~G~mD~~~L 546 (891)
++|+++++..++.+++.. . +.-.|++..-+|.+...++...|.+++.+|.+ +++.+|+++|
T Consensus 100 ~~g~~~a~~~~~~~~~~~--~---------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 162 (396)
T 2q7w_A 100 TPGGTGALRVAADFLAKN--T---------------SVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDAL 162 (396)
T ss_dssp ESHHHHHHHHHHHHHHHH--S---------------CCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHH
T ss_pred cccchhhHHHHHHHHHHh--C---------------CCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHH
Confidence 789999999888665421 0 11246777778888888888889999999985 6788999999
Q ss_pred HHHHHhhhhcCCccEEEEe----cCCccc-----------hhhh-----hcC---------------C------CCccEE
Q psy852 547 RQVMQQDETMGYIPFFVST----TLGTTS-----------CYRK-----SQG---------------I------EYADSF 585 (891)
Q Consensus 547 e~aI~~d~~~g~ip~~Vva----taGTT~-----------c~~~-----ldG---------------i------~~aDSI 585 (891)
++++++... ...++++. ..|++. |.++ +|. + ..-+-+
T Consensus 163 ~~~l~~~~~--~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (396)
T 2q7w_A 163 INSLNEAQA--GDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHTTCCT--TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred HHHHHhCCC--CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEE
Confidence 999975311 12223322 245543 3321 111 0 112345
Q ss_pred EEcCcccCCcc-cccEEEEE--eCCc---cchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH----
Q psy852 586 NVNVNKWLLTA-FDSSCLWV--ADRY---KLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG---- 655 (891)
Q Consensus 586 s~d~HK~L~~P-~g~G~llv--R~~~---~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG---- 655 (891)
..+.||.++.| ..+|++++ .+++ .+.+.+.. +.+. .+. . ...+.++++...+.
T Consensus 241 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~---~~~~---------~~~--~---~~~~~~~a~~~~l~~~~l 303 (396)
T 2q7w_A 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKA---AIRA---------NYS--N---PPAHGASVVATILSNDAL 303 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHH---HHHT---------TTS--S---CCHHHHHHHHHHHTSHHH
T ss_pred EEeccccccccccccceEEEEcCCHHHHHHHHHHHHH---HHhh---------ccC--C---CCcHHHHHHHHHhcChhh
Confidence 77899988743 34799887 2332 12211110 0000 000 0 01233333434332
Q ss_pred ----HhhHHHHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeec
Q psy852 656 ----LSGLQKYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPA 728 (891)
Q Consensus 656 ----~~G~~~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s 728 (891)
.+.+++..++..++++++.+.|++.. ++++.. +..+.+.|- +. + .+.+...|.+.|+++. +
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~-----~--~~~~~~~l~~~gv~v~-~- 371 (396)
T 2q7w_A 304 RAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFII-KQNGMFSFS--GL-----T--KEQVLRLREEFGVYAV-A- 371 (396)
T ss_dssp HHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHH-HCCSSEEEC--CC-----C--HHHHHHHHHHHCEECC-T-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceec-CCCceEEEe--cC-----C--HHHHHHHHHhcCeeec-C-
Confidence 23556666677888999999998864 355543 233333221 11 1 1345566677887632 2
Q ss_pred cccCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy852 729 SQEQNDEVFELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 729 ~~~g~~~l~sv~~~tT~edId~li~~L~ei 758 (891)
...++++.. |+++++++++.|+++
T Consensus 372 -----~~Ris~~~~-~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 372 -----SGRVNVAGM-TPDNMAPLCEAIVAV 395 (396)
T ss_dssp -----TCEEEGGGC-CTTTHHHHHHHHHHH
T ss_pred -----CceEEEeec-CHHHHHHHHHHHHhc
Confidence 123777643 899999999998764
No 427
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=97.60 E-value=0.00028 Score=78.23 Aligned_cols=284 Identities=11% Similarity=0.045 Sum_probs=181.6
Q ss_pred HHHHHHHHHHhhcc-CCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH----H
Q psy852 445 HCELAKLFEGKVRR-DPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC----V 519 (891)
Q Consensus 445 ~lelAr~l~~~L~~-~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S----v 519 (891)
..++.+.+++.+.. .+. +++ +++|+++++..++.+++.... .+...|+++..+|++ +
T Consensus 74 ~~~l~~~la~~~~~~~~~-~v~--~~~g~t~a~~~~~~~~~~~~~---------------~~gd~Vl~~~~~~~~~~~~~ 135 (420)
T 1t3i_A 74 YEAVRNKVAKFINARSPR-EIV--YTRNATEAINLVAYSWGMNNL---------------KAGDEIITTVMEHHSNLVPW 135 (420)
T ss_dssp HHHHHHHHHHHTTCSCGG-GEE--EESSHHHHHHHHHHHTHHHHC---------------CTTCEEEEETTCCGGGTHHH
T ss_pred HHHHHHHHHHHcCCCCCC-eEE--EcCChHHHHHHHHHHhhhccc---------------CCCCEEEECcchhHHHHHHH
Confidence 34455577777765 233 555 678999999999988753211 012357788888887 4
Q ss_pred HHHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------hhhh-----hcCC----
Q psy852 520 EKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------CYRK-----SQGI---- 579 (891)
Q Consensus 520 ~Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c~~~-----ldGi---- 579 (891)
...+...|.+++.+|.++++.+|+++|+++|++++ ..++++.. .|... |+++ +|++
T Consensus 136 ~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~----~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~ 211 (420)
T 1t3i_A 136 QMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKT----KLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAP 211 (420)
T ss_dssp HHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCTTE----EEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred HHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCCCc----eEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccC
Confidence 56666778899999999999999999999997532 12223222 35443 4431 2221
Q ss_pred --C------CccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-CCCcc--ccCCCCC--ccccCCccc-cccc-ccc
Q psy852 580 --E------YADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYL--QHGHEGA--IDYRHWGIP-LSRR-FRS 644 (891)
Q Consensus 580 --~------~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~~~Yl--~~~~e~~--~~~~~~ti~-~SRr-~~a 644 (891)
. .+|.+++++|| +++|.|+|+++++++ +.+.+.. ...+. ....... +......+. ++.. ...
T Consensus 212 ~~~~~~~~~~~di~~~s~sK-~~~~~g~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (420)
T 1t3i_A 212 HYPLDVQLIDCDWLVASGHK-MCAPTGIGFLYGKEE--ILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEA 288 (420)
T ss_dssp TSCCCHHHHTCSEEEEEGGG-TTSCTTCEEEEECHH--HHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHH
T ss_pred CccCchhhcCCCEEEEehhh-hcCCCceEEEEEchH--HHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHH
Confidence 1 37999999999 556888999988753 2222211 11100 0000000 000000111 1111 122
Q ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-----ceeEEEEEecCCcchhhhhhHHHHHHHHHh
Q psy852 645 LKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV-----RLGLVCFRLRSENNLIADQNNRKLLEDINA 719 (891)
Q Consensus 645 L~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-----~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~ 719 (891)
+.++.+++.+...++.+..++..++++++.+.|++.++++++.+. ..++++|.+++. ...++.+.|.+
T Consensus 289 ~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~ 361 (420)
T 1t3i_A 289 IALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGL-------HASDVATMVDQ 361 (420)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTB-------CHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCC-------CHHHHHHHHHH
Confidence 344446777776788899999999999999999998899988764 378899987532 34567888888
Q ss_pred CCcEEEeecc-------ccC-CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 720 SGRLHMVPAS-------QEQ-NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 720 ~G~~~~s~s~-------~~g-~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.|+.+..+.. ..+ ...+ ++++..++++|+++++++|+++.+
T Consensus 362 ~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~ 411 (420)
T 1t3i_A 362 DGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIR 411 (420)
T ss_dssp TTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 9987543321 112 4456 999988999999999999998874
No 428
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=97.58 E-value=0.00049 Score=77.97 Aligned_cols=220 Identities=7% Similarity=-0.031 Sum_probs=126.5
Q ss_pred HHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecc-cchHHHHHH-------
Q psy852 451 LFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSK-EAHSCVEKA------- 522 (891)
Q Consensus 451 ~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~-~aH~Sv~Ka------- 522 (891)
.+++.+.. +. .++.+.+++|+++|..++.+.- + +.-.|+++. ..|......
T Consensus 67 ~lA~l~g~-e~-alv~p~~~sGt~Ai~~al~all----~---------------~GD~Vl~~~~~~y~~~~~~~~~~g~~ 125 (409)
T 3jzl_A 67 VYATVFKT-EA-ALVRPQIISGTHAISTVLFGIL----R---------------PDDELLYITGQPYDTLEEIVGIRKQG 125 (409)
T ss_dssp HHHHHHTC-SE-EEEETTSCSHHHHHHHHHHHHC----C---------------TTCEEEECSSSCCTTHHHHHTSSSSS
T ss_pred HHHHHhCC-Cc-EEEECCCccHHHHHHHHHHHhc----C---------------CCCEEEEeCCCCcHhHHHHHhcccch
Confidence 44445544 22 2332226788999887776531 0 112466665 666666543
Q ss_pred ---HHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecC-------Cccc--------hhh--h-----hc
Q psy852 523 ---AMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTL-------GTTS--------CYR--K-----SQ 577 (891)
Q Consensus 523 ---a~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvata-------GTT~--------c~~--~-----ld 577 (891)
+...|++++.+|.+++|.+|+++|+++|++.+ ..+++..+. |+.. |++ + +|
T Consensus 126 ~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~t----klV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD 201 (409)
T 3jzl_A 126 QGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKT----KMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVD 201 (409)
T ss_dssp SSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTE----EEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred hhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCC----eEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEe
Confidence 34468899999999999999999999997532 223333322 2222 444 2 22
Q ss_pred C-----C-------CCccEEEEcCcccCCcccc-c-EEEEEeCCccchhhhc-cCCCccccCCCCCccccCCcccccccc
Q psy852 578 G-----I-------EYADSFNVNVNKWLLTAFD-S-SCLWVADRYKLTSALV-VDPLYLQHGHEGAIDYRHWGIPLSRRF 642 (891)
Q Consensus 578 G-----i-------~~aDSIs~d~HK~L~~P~g-~-G~llvR~~~~L~~~l~-~~~~Yl~~~~e~~~~~~~~ti~~SRr~ 642 (891)
. + ..+|.+..++||+++++.. . |+++. +++.+..... ....++.. ..+. ..
T Consensus 202 ~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~---------~~g~----~~ 267 (409)
T 3jzl_A 202 NCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLCGYRLTTPGIGR---------EAGA----SL 267 (409)
T ss_dssp CTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTGG---------GCCC----CT
T ss_pred CCcccccccCCccccCCeEEEECccccCCccCCceEEEEEe-CHHHHHHHHHHhccccccc---------cccc----cH
Confidence 1 1 2379999999999987642 2 55554 4443322211 11111110 0000 00
Q ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCcee-----EEEEEecCCcchhhhhhHHHHHHHH
Q psy852 643 RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLG-----LVCFRLRSENNLIADQNNRKLLEDI 717 (891)
Q Consensus 643 ~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-----iV~Fr~~~~~~~~~d~ln~~L~~~L 717 (891)
. ..|..++ |..-+..++++..++++++.+.|++++ +++... ... +++|.+.+ +....++.+.|
T Consensus 268 ~--~~~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~g-~~v~p~-~~~~~~~~i~~i~l~~------~~~~~~~~~~L 335 (409)
T 3jzl_A 268 Y--SLLEMYQ--GFFLAPHVTAQAIKGARFTAAMLAEFG-VEADPV-WDAPRTDLIQSVSFHN------KEKMVAFAQAI 335 (409)
T ss_dssp T--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEESC-TTSCCSSSCCEEECSC------HHHHHHHHHHH
T ss_pred H--HHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhCC-CcccCC-CCCCCccEEEEEEeCC------HHHHHHHHHHH
Confidence 0 1244433 445567788899999999999999974 577422 222 78888852 34556778888
Q ss_pred HhCC
Q psy852 718 NASG 721 (891)
Q Consensus 718 ~~~G 721 (891)
+...
T Consensus 336 ~~~~ 339 (409)
T 3jzl_A 336 QAAS 339 (409)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 7753
No 429
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=97.58 E-value=0.0017 Score=72.78 Aligned_cols=56 Identities=16% Similarity=0.107 Sum_probs=44.8
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
|+++|++.+++.. ..+.+|+++-.++.+|.+-| +++|.++ ++||++|.+|-+++|+
T Consensus 185 d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~ 244 (424)
T 2e7u_A 185 DPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF 244 (424)
T ss_dssp CHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT
T ss_pred CHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc
Confidence 8999999987531 12456666666666898877 9999999 9999999999999765
No 430
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=97.51 E-value=0.004 Score=71.48 Aligned_cols=97 Identities=13% Similarity=0.089 Sum_probs=63.8
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC----CC-cEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcE
Q psy852 649 FVIRTYGLSGLQKYIRRHCELAKLFEGKVRRD----PR-FEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRL 723 (891)
Q Consensus 649 ~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~----~~-~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~ 723 (891)
.+|+.+-.++ ..++..+++++|.++|+++ +. +.-+ ++...++.|.+.+ +.....+.++|.+.|++
T Consensus 366 aal~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~------~~~~~~~~~~l~~~Gv~ 435 (472)
T 1ohv_A 366 EVINIIKRED---LLSNAAHAGKVLLTGLLDLQARYPQFISRV-RGRGTFCSFDTPD------ESIRNKLISIARNKGVM 435 (472)
T ss_dssp HHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EEETTEEEEECSS------HHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cCCceEEEEEeCC------hhHHHHHHHHHHHCCeE
Confidence 4444443333 4566677788888887653 32 3222 1234566776642 23456788889889987
Q ss_pred EEeeccccCCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 724 HMVPASQEQNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 724 ~~s~s~~~g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+.. .+...+ ++++..+|++|||++++.|++++
T Consensus 436 ~~~----~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l 468 (472)
T 1ohv_A 436 LGG----CGDKSIRFRPTLVFRDHHAHLFLNIFSDIL 468 (472)
T ss_dssp CEE----ETTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred Eec----CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 432 134567 99999999999999999999876
No 431
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=97.51 E-value=0.0012 Score=75.29 Aligned_cols=220 Identities=7% Similarity=-0.037 Sum_probs=124.5
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecc-cchHHHHHHHHH-
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSK-EAHSCVEKAAMM- 525 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~-~aH~Sv~Kaa~l- 525 (891)
+.+.+++.+..... ++....++|+++|..++.+.. .+.-.|+++. ..|.+....+.+
T Consensus 70 l~~~la~~~g~~~~--~~~i~~~sGt~Ai~~al~al~-------------------~~Gd~Vl~~~~~~y~~~~~~~~l~ 128 (431)
T 3ht4_A 70 LEKVYADVFGAEAG--LVRPQIISGTHAISTALFGIL-------------------RPGDELLYITGKPYDTLEEIVGVR 128 (431)
T ss_dssp HHHHHHHHTTCSEE--CCBTTSCSHHHHHHHHHHTTC-------------------CTTCEEEECSSSCCTTHHHHTTSS
T ss_pred HHHHHHHHhCCCcc--cccceeeCHHHHHHHHHHHhC-------------------CCCCEEEEeCCCCchhHHHHHhhc
Confidence 44455555543222 111223467899888875421 1112456665 778887766533
Q ss_pred ---------cCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe----cCCccc-----------hhh--h----
Q psy852 526 ---------AFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST----TLGTTS-----------CYR--K---- 575 (891)
Q Consensus 526 ---------~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva----taGTT~-----------c~~--~---- 575 (891)
.|++++.+|.+++|.+|+++|+++|++.+ ..+++.. ..|.+. |++ +
T Consensus 129 g~~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~~~t----k~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~l 204 (431)
T 3ht4_A 129 GKGVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIHSNT----KMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVV 204 (431)
T ss_dssp SCSSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCCTTE----EEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEE
T ss_pred ccccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcCCCC----eEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEE
Confidence 57899999999999999999999997532 2233332 223332 444 2
Q ss_pred -hcC-----C-------CCccEEEEcCcccCCc---ccccEEEEEeCCccchhhhcc--CCCccccCCCCCccccCCccc
Q psy852 576 -SQG-----I-------EYADSFNVNVNKWLLT---AFDSSCLWVADRYKLTSALVV--DPLYLQHGHEGAIDYRHWGIP 637 (891)
Q Consensus 576 -ldG-----i-------~~aDSIs~d~HK~L~~---P~g~G~llvR~~~~L~~~l~~--~~~Yl~~~~e~~~~~~~~ti~ 637 (891)
+|. . -.+|.+..++||++++ |.| |+++.++ +.+. .+.. ....+. ..
T Consensus 205 ivDea~~~~~~~~~~~~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~-~li~-~l~~~~~~~~~g-------------~~ 268 (431)
T 3ht4_A 205 FVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVKTG-GYIVGKE-QYVE-ACAYRLTSPGIG-------------AE 268 (431)
T ss_dssp EEECTTCTTSSSCCGGGTTCSEEEEETTSGGGTTTCSSC-EEEEECH-HHHH-HHHHHHSCTTTT-------------TS
T ss_pred EEeCCChhhccCCCccccCCeEEEcCccccCCCCCCCce-EEEEecH-HHHH-HHHHHhccCCcc-------------cc
Confidence 221 1 1379999999999765 666 7776653 3222 2211 111110 00
Q ss_pred ccccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCcee-----EEEEEecCCcchhhhhhHHH
Q psy852 638 LSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLG-----LVCFRLRSENNLIADQNNRK 712 (891)
Q Consensus 638 ~SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-----iV~Fr~~~~~~~~~d~ln~~ 712 (891)
.+-.+.. .|..+ -+...+..++++..++++++.+.|++.+ +++... ... ++.|.+.. +....+
T Consensus 269 ~~~~~~~--~~~~~--~~l~~~~~~~~~~~~~a~~l~~~L~~~g-~~v~p~-~~~~~~~li~~i~l~~------~~~~~~ 336 (431)
T 3ht4_A 269 AGASLYS--LQEMY--QGFFLAPHVAGQALKGAIFTAAFLEKLG-MNTSPA-WNAPRTDLIQSVQFDD------KDRMIA 336 (431)
T ss_dssp CSCCCSC--SHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHT-CCEESC-TTSCCSSSCCEEECCC------HHHHHH
T ss_pred cCccHHH--HHHHH--hHhhhHHHHHHHHHHHHHHHHHHHHhCc-CEecCC-CCCCCccEEEEEEeCC------HHHHHH
Confidence 0000110 12222 2445567788889999999999998864 455322 222 77788752 234557
Q ss_pred HHHHHHhC
Q psy852 713 LLEDINAS 720 (891)
Q Consensus 713 L~~~L~~~ 720 (891)
+.+.|...
T Consensus 337 ~~~~l~~~ 344 (431)
T 3ht4_A 337 FCQAIQYA 344 (431)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 77777764
No 432
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=97.49 E-value=0.00023 Score=80.95 Aligned_cols=238 Identities=8% Similarity=0.025 Sum_probs=132.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH----HcCceEEEecC-CCC--CCc
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM----MAFVRLKILEP-DDK--NSL 541 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~----l~gv~v~~Vp~-d~~--G~m 541 (891)
|+|+++++..++...+. .. +.-.|+++.-.|.+....+. ..|.+++.+|. |++ +.+
T Consensus 125 t~ggt~al~l~~~~~~~--~~---------------~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~ 187 (448)
T 3meb_A 125 SLSGTGSLHIGFEFLHL--WM---------------PKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEI 187 (448)
T ss_dssp ESHHHHHHHHHHHHHHH--HC---------------TTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSB
T ss_pred CCcHHHHHHHHHHHHHH--hC---------------CCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCc
Confidence 88999999775432221 10 11247888888888888888 78899999998 765 899
Q ss_pred CHHHHHHHHHhhhhcCCccEEEE----ecCCccc-----------hhhh-----hcC----C-----------------C
Q psy852 542 RGATLRQVMQQDETMGYIPFFVS----TTLGTTS-----------CYRK-----SQG----I-----------------E 580 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vv----ataGTT~-----------c~~~-----ldG----i-----------------~ 580 (891)
|+++|+++|++... + ..++++ +..|+.. |.++ +|. + .
T Consensus 188 d~e~l~~~l~~~~~-~-~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~ 265 (448)
T 3meb_A 188 DFSNTKKDIQSAPE-K-SIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDA 265 (448)
T ss_dssp CHHHHHHHHHHSCT-T-CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHT
T ss_pred CHHHHHHHHHhCCC-C-cEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhc
Confidence 99999999986311 1 223332 3355553 3321 111 0 0
Q ss_pred Ccc-EEEEcCcccCCcc-cccEEE--EE--------eCCc---cchhhhccCCCccccCCCCCccccCCcccccccccch
Q psy852 581 YAD-SFNVNVNKWLLTA-FDSSCL--WV--------ADRY---KLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSL 645 (891)
Q Consensus 581 ~aD-SIs~d~HK~L~~P-~g~G~l--lv--------R~~~---~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL 645 (891)
..+ -+..++||.++.| ..+|++ +. .++. .+...+.. ..+.... ....+
T Consensus 266 ~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~--------------~~~~~ 328 (448)
T 3meb_A 266 GVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL---QIRKTWS--------------MSAIH 328 (448)
T ss_dssp TCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH---HHHTTTS--------------SCCHH
T ss_pred CCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHH---HHhcccC--------------CccHH
Confidence 112 3477899988855 447887 44 3331 11111110 0000000 00122
Q ss_pred HHHHHHHHHHH--------hhHHHHHHHHHHHHHHHHHHhccC--CC------cEEeCCCceeEEEEEecCCcchhhhhh
Q psy852 646 KLWFVIRTYGL--------SGLQKYIRRHCELAKLFEGKVRRD--PR------FEISNDVRLGLVCFRLRSENNLIADQN 709 (891)
Q Consensus 646 ~lW~~L~~lG~--------~G~~~~i~~~~~lA~~L~~~L~~~--~~------~eil~~~~~~iV~Fr~~~~~~~~~d~l 709 (891)
.++++...+.. +.++++.++..+++++|.+.|++. ++ +.... ++.+..+ +.+.
T Consensus 329 ~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~-~~~g~~~--~~~~-------- 397 (448)
T 3meb_A 329 GAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHIL-TAIGMFT--FTGL-------- 397 (448)
T ss_dssp HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHH-HCCSSEE--ECCC--------
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeC-CCceEEE--ecCC--------
Confidence 33333333322 446677778888999999999876 44 43322 2223322 2222
Q ss_pred HHHHHHHH-HhCCcEEEeeccccCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy852 710 NRKLLEDI-NASGRLHMVPASQEQNDEVFELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 710 n~~L~~~L-~~~G~~~~s~s~~~g~~~l~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..++...| .+.|+++..++ + .+++... +.++|+++++.|++++.
T Consensus 398 ~~~~~~~ll~~~gV~v~~G~---g---Ris~a~~-~~~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 398 TPEHVDYLKEKWSIYLVKAG---G---RMSMCGL-TESNCDYVAEAIHDAVT 442 (448)
T ss_dssp CHHHHHHHHHHHCEEECSGG---G---EEEGGGC-CTTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEEeCCC---c---EEEEecC-CHHHHHHHHHHHHHHHH
Confidence 12444555 55687744333 1 4666544 44569999999998763
No 433
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=97.48 E-value=0.0087 Score=68.25 Aligned_cols=218 Identities=10% Similarity=0.056 Sum_probs=127.9
Q ss_pred eEEEecCC-CCCCcCHHHHHHHHHhhhhcCCccEEEEecCCccc-----------hhh----------hhcC--------
Q psy852 529 RLKILEPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTS-----------CYR----------KSQG-------- 578 (891)
Q Consensus 529 ~v~~Vp~d-~~G~mD~~~Le~aI~~d~~~g~ip~~VvataGTT~-----------c~~----------~ldG-------- 578 (891)
+....++| ++|.+|.+.|++...+. .|-+|++..-... |.+ |+.|
T Consensus 177 ~~~~Y~vd~~t~~IDyd~~~~~A~~~-----kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p 251 (490)
T 3ou5_A 177 ESMPYKLNPKTGLIDYNQLALTARLF-----RPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp ---CBCEETTTTEECHHHHHHHHHHH-----CCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC
T ss_pred cccccccCCCCCcccHHHHHHHHhhc-----CCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccC
Confidence 44445566 56999999999998874 2556655443322 221 3333
Q ss_pred --CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCC---CccccCCCCCcccc-CCcccccccccc-hHHHHHH
Q psy852 579 --IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDP---LYLQHGHEGAIDYR-HWGIPLSRRFRS-LKLWFVI 651 (891)
Q Consensus 579 --i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~---~Yl~~~~e~~~~~~-~~ti~~SRr~~a-L~lW~~L 651 (891)
+++||-+|.+-||.|-+|-| |++++++...-...-.... .|-. ..+.. -.+++++=-... .+...++
T Consensus 252 sP~~~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~~~~k~~~~~~~~~~k-----kin~aVFPg~qggp~~h~IAAkAVaf 325 (490)
T 3ou5_A 252 SPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFED-----RINFAVFPSLQGGPHNHAIAAVAVAL 325 (490)
T ss_dssp CGGGTCSEEEEESSSTTCSCSC-EEEEEECSEEEECC--CCEEECCCHH-----HHHHHHTTTTCSSCCHHHHHHHHHHH
T ss_pred CccccceEEeccccccccCCCc-eEEEeccccccccccccchhHHHHHH-----HHHhhcCccccccchHHHHHHHHHHH
Confidence 57899999999999999985 7888887521000000000 0000 00000 012222211222 2233445
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeC-CCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc-
Q psy852 652 RTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISN-DVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS- 729 (891)
Q Consensus 652 ~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~-~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~- 729 (891)
+..-...+++..++.+++|+.|++.|.+ .+|.+++ -.+..+|...+.+. +-.....-..|.+.|+..---+.
T Consensus 326 ~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~-~G~~vvsGgTdnHlvLvDl~~~-----g~tG~~ae~~Le~agItvNkN~iP 399 (490)
T 3ou5_A 326 KQACTPMFREYSLQVLKNARAMADALLE-RGYSLVSGGTDNHLVLVDLRPK-----GLDGARAERVLELVSITANKNTCP 399 (490)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECGGG-----TCCHHHHHHHHHHTTEECEEECCT
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHh-CCCeeecCCCCceEEEEecccc-----CCCHHHHHHHHHHcCcEECCCCCC
Confidence 5555667888899999999999999988 4899875 35667787777654 22344556667778876221110
Q ss_pred -----ccCCeEEEE----ecCCCCHHHHHHHHHHHHHHHHHHH
Q psy852 730 -----QEQNDEVFE----LQERKRKDDLAYKRSFFVRMLGLVC 763 (891)
Q Consensus 730 -----~~g~~~l~s----v~~~tT~edId~li~~L~ei~~~~~ 763 (891)
..-.++.+. +.+...++|++++.+.|.+++..-.
T Consensus 400 ~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~~~~ 442 (490)
T 3ou5_A 400 GDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGL 442 (490)
T ss_dssp TCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHHhhh
Confidence 111122344 4557899999999999988875433
No 434
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=97.47 E-value=0.01 Score=68.09 Aligned_cols=58 Identities=9% Similarity=-0.065 Sum_probs=45.0
Q ss_pred HHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCCc
Q psy852 179 GATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 179 ~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+++|++.+++.. ...+.+|++.-.++..|.+-| +++|+++|++||++|++|-++.|+.
T Consensus 207 ~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~g 268 (476)
T 3i5t_A 207 VQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFG 268 (476)
T ss_dssp HHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred HHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCc
Confidence 788998887421 122457777777778887666 9999999999999999999997653
No 435
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=97.46 E-value=0.0014 Score=73.88 Aligned_cols=156 Identities=12% Similarity=0.015 Sum_probs=82.4
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQK 661 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~ 661 (891)
.|.+++ +|+++..+..|+++.+++ +.+.+...... ....+.. .-++.......+|+.+.. .+
T Consensus 264 ~di~s~--sK~l~~G~~~G~v~~~~~--~~~~l~~~~~~----------~~~~t~~-~~~~~~aa~~a~l~~~~~---~~ 325 (434)
T 2epj_A 264 GDIIVL--GKIIGGGFPVGAVAGSRE--VMSLLTPQGKV----------FNAGTFN-AHPITMAAGLATLKALEE---EP 325 (434)
T ss_dssp CSEEEE--EGGGGTTSSCEEEEECHH--HHTTBTTTSSB----------CCCCTTT-TCHHHHHHHHHHHHHHHH---SC
T ss_pred CCeeee--cchhcCCcceeeeeecHH--HHHhhccCCCc----------ccCCCCC-cCHHHHHHHHHHHHHHHh---cC
Confidence 576655 599887567899988753 22222110000 0000111 111122222334444333 23
Q ss_pred HHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchhh-------hhhHHHHHHHHHhCCcEEEeecccc
Q psy852 662 YIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLIA-------DQNNRKLLEDINASGRLHMVPASQE 731 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~~-------d~ln~~L~~~L~~~G~~~~s~s~~~ 731 (891)
..++..+++++|.+.|++.. ++....+...+++.|.+.+.....+ .....++.+.|.++|+++. +..
T Consensus 326 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~-~~~-- 402 (434)
T 2epj_A 326 VYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIA-PSN-- 402 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECC-SST--
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEe-ccC--
Confidence 45666677788888876641 2211112234577888754100000 1245678888988997633 221
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy852 732 QNDEVFELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 732 g~~~l~sv~~~tT~edId~li~~L~ei~~ 760 (891)
... +.++..+|++|++++++.|++.+.
T Consensus 403 -~~~-~~~~~~~t~e~i~~~l~~l~~~l~ 429 (434)
T 2epj_A 403 -LEA-VFTGLPHQGEALEIAVEGLRSSLK 429 (434)
T ss_dssp -TSC-EECCTTCSHHHHHHHHHHHHHHHH
T ss_pred -CCc-EEEeccCCHHHHHHHHHHHHHHHH
Confidence 111 345567899999999999998764
No 436
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=97.43 E-value=0.0013 Score=73.21 Aligned_cols=242 Identities=10% Similarity=-0.049 Sum_probs=132.0
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCce-EEEecCCCCCCc
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVR-LKILEPDDKNSL 541 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~-v~~Vp~d~~G~m 541 (891)
+|+ +++|+++++..++.. .. +.-.|++..-+|.+...++...|.+ ++.+|.++++.+
T Consensus 97 ~v~--~~~G~~~al~~~~~~-----~~---------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 154 (400)
T 3asa_A 97 EIF--ISDGAKVDLFRLLSF-----FG---------------PNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAF 154 (400)
T ss_dssp GEE--EESCHHHHHHHHHHH-----HC---------------SSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTT
T ss_pred HEE--EccChHHHHHHHHHH-----cC---------------CCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCc
Confidence 455 678888887764321 11 1124666777888888888777887 888988754433
Q ss_pred CHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------hhhh-----hc---------C--------CCC-cc-
Q psy852 542 RGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------CYRK-----SQ---------G--------IEY-AD- 583 (891)
Q Consensus 542 D~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c~~~-----ld---------G--------i~~-aD- 583 (891)
+.+ |++. .....++++. ..|++. |.++ +| + ++. .|
T Consensus 155 ~~~-l~~~------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 227 (400)
T 3asa_A 155 FPE-FPED------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFC 227 (400)
T ss_dssp CCC-CCTT------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGT
T ss_pred ccC-hhhc------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCc
Confidence 321 2210 1111233322 234442 3221 01 1 111 23
Q ss_pred -EEEEcCcccCCcc-cccEEEEEeCCcc------chhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH
Q psy852 584 -SFNVNVNKWLLTA-FDSSCLWVADRYK------LTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG 655 (891)
Q Consensus 584 -SIs~d~HK~L~~P-~g~G~llvR~~~~------L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG 655 (891)
-+..+++|+++.| ..+|+++.+++.. +........ ..+.. ....+.+.++...+.
T Consensus 228 ~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~---~~~~~~~~a~~~~l~ 290 (400)
T 3asa_A 228 AIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFL--------------STTFN---GASIPAQEAGVAGLS 290 (400)
T ss_dssp EEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHH--------------HHHCC---CCCHHHHHHHHHHHH
T ss_pred eEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHh--------------ccCcc---CCChHHHHHHHHHhC
Confidence 5578899999744 4589988765431 111100000 00000 011223333333332
Q ss_pred HhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEE-ecCCcchhhhhhHHHHHHHHHh-CCcEEEeeccc--c
Q psy852 656 LSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFR-LRSENNLIADQNNRKLLEDINA-SGRLHMVPASQ--E 731 (891)
Q Consensus 656 ~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr-~~~~~~~~~d~ln~~L~~~L~~-~G~~~~s~s~~--~ 731 (891)
...+++..++..+++++|.+.|++. ++++..+...+.++++ ++.. ....++.+.|.+ .|+.+..+... .
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~gv~v~~g~~f~~~ 363 (400)
T 3asa_A 291 ILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKPTQAN------ISDRDLFDFFLREYHIAITPGIGFGRS 363 (400)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEECCCTT------CCTTTHHHHHHHHHSEECEEGGGGCGG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEeccCCC------CCHHHHHHHHHHhCCEEEeChhHhCCC
Confidence 2246667777788899999999886 7887755456678888 5421 112356677764 58875544332 2
Q ss_pred CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 732 QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 732 g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+...+ +++ .+++++|+++++.|+++.
T Consensus 364 ~~~~iRis~--~~~~e~i~~~l~~l~~~~ 390 (400)
T 3asa_A 364 GSGFVRFSS--LGKREDILAACERLQMAP 390 (400)
T ss_dssp GTTCEEEEC--CSCHHHHHHHHHHHHC--
T ss_pred CCCEEEEEe--eCCHHHHHHHHHHHHHHH
Confidence 33445 773 578999999999998765
No 437
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=97.42 E-value=0.0057 Score=69.61 Aligned_cols=58 Identities=16% Similarity=0.079 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCCc
Q psy852 179 GATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 179 ~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+++|++.+++.. ...+.+|++.-.++..|.+-| +++|+++|++||++|++|-++.|+.
T Consensus 207 ~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g 268 (460)
T 3gju_A 207 ADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFG 268 (460)
T ss_dssp HHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred HHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 688998887421 123467777777888888776 9999999999999999999997653
No 438
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=97.42 E-value=0.0079 Score=68.06 Aligned_cols=264 Identities=12% Similarity=0.082 Sum_probs=130.0
Q ss_pred HHHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHH
Q psy852 445 HCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAM 524 (891)
Q Consensus 445 ~lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~ 524 (891)
..++++++.+.... +. +++ +++||+|++..++.+||... + ++-+|+....-|....-+..
T Consensus 99 ~~~la~~l~~~~~~-~~-~v~--~~~gg~eA~~~al~~ar~~~-~---------------~~~vi~~~~~yhg~~~~~~~ 158 (453)
T 2cy8_A 99 EVRWAERIVAAFPS-IR-KLR--FTGSGTETTLLALRVARAFT-G---------------RRMILRFEGHYHGWHDFSAS 158 (453)
T ss_dssp HHHHHHHHHHHCTT-CS-EEE--EESCHHHHHHHHHHHHHHHH-C---------------CCEEEEECC-----------
T ss_pred HHHHHHHHHhhCCC-CC-EEE--EeCCHHHHHHHHHHHHHHhh-C---------------CCEEEEEcCCcCCCchhhHh
Confidence 34555666555432 22 455 78899999999999987521 1 11234444444532221111
Q ss_pred ----------HcCc------eEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec----CCccc------------h
Q psy852 525 ----------MAFV------RLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT----LGTTS------------C 572 (891)
Q Consensus 525 ----------l~gv------~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat----aGTT~------------c 572 (891)
..++ .+..+|. .|+++|+++|++.. ..+-++++.. .|... |
T Consensus 159 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~d~~~le~~l~~~~--~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~ 231 (453)
T 2cy8_A 159 GYNSHFDGQPAPGVLPETTANTLLIRP-----DDIEGMREVFANHG--SDIAAFIAEPVGSHFGVTPVSDSFLREGAELA 231 (453)
T ss_dssp -----------------CGGGEEEECT-----TCHHHHHHHHHHHG--GGEEEEEECSSEHHHHTEECCHHHHHHHHHHH
T ss_pred hcCCccCCCcCCCCCccccCceeecCC-----CCHHHHHHHHHhcC--CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHH
Confidence 1122 2444443 38999999997531 1122333322 34322 3
Q ss_pred hhh-----hc----CC------------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccc
Q psy852 573 YRK-----SQ----GI------------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDY 631 (891)
Q Consensus 573 ~~~-----ld----Gi------------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~ 631 (891)
.++ +| |+ -..|.+++ .|+++..+++|+++.+++ +.+.+.... .. ...
T Consensus 232 ~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~s~--sK~l~~G~~~G~v~~~~~--~~~~l~~~~----~~--~~~-- 299 (453)
T 2cy8_A 232 RQYGALFILDEVISGFRVGNHGMQALLDVQPDLTCL--AKASAGGLPGGILGGRED--VMGVLSRGS----DR--KVL-- 299 (453)
T ss_dssp HHTTCEEEEECTTTTTTTCTTHHHHHHTCCCSEEEE--EGGGGTTSSCEEEEECHH--HHTTSSSCC-------------
T ss_pred HHcCCEEEEecCccccccCchhhhHHhCCCCcEEEE--ChhhhCCcceEEEechHH--HHHHhcccc----CC--Cce--
Confidence 331 11 11 02476654 599987778999998753 222221100 00 000
Q ss_pred cCCcccccccccchHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHhccC----CCcEEeCCCceeEEEEEecC-----C
Q psy852 632 RHWGIPLSRRFRSLKLWFVIRT-YGLSGLQKYIRRHCELAKLFEGKVRRD----PRFEISNDVRLGLVCFRLRS-----E 701 (891)
Q Consensus 632 ~~~ti~~SRr~~aL~lW~~L~~-lG~~G~~~~i~~~~~lA~~L~~~L~~~----~~~eil~~~~~~iV~Fr~~~-----~ 701 (891)
...+.. .-++.......+|+. + . .+..++..++++++.+.|++. +....+ ++..+++.+.+.+ .
T Consensus 300 ~~~t~~-~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~ 373 (453)
T 2cy8_A 300 HQGTFT-GNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHLFARKGLNWLA-YGRFSGFHLMPGLPPNTTD 373 (453)
T ss_dssp ----CC-CCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-ECCTTEEEEEETSCTTCCC
T ss_pred eCCCCC-CCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEE-EEeeeEEEEEEeccccccc
Confidence 000110 011112222334443 3 2 344566677778888777653 322222 3344577888753 1
Q ss_pred c-chhh-------hhhHHHHHHHHHhCCcEEEeeccccCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy852 702 N-NLIA-------DQNNRKLLEDINASGRLHMVPASQEQNDEVFELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 702 ~-~~~~-------d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l~sv~~~tT~edId~li~~L~ei~~ 760 (891)
. ...+ .....++.+.|.++|+++ .+ ... + .++...+++||+++++.|++.+.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v-~~----~~~-~-~l~~~~t~~~i~~~l~~l~~~l~ 433 (453)
T 2cy8_A 374 TGSITRAEVARPDVKMIAAMRMALILEGVDI-GG----RGS-V-FLSAQHEREHVEHLVTTFDRVLD 433 (453)
T ss_dssp CHHHHTTCSCCCCHHHHHHHHHHHHHTTEEC-BT----TTE-E-ECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHHCCeEE-eC----CCC-E-EeeccCCHHHHHHHHHHHHHHHH
Confidence 0 0000 123567888888899874 22 112 3 34567899999999999998874
No 439
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=97.41 E-value=0.0032 Score=71.67 Aligned_cols=219 Identities=8% Similarity=0.055 Sum_probs=122.9
Q ss_pred HHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecc-cchHHHH--------
Q psy852 450 KLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSK-EAHSCVE-------- 520 (891)
Q Consensus 450 r~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~-~aH~Sv~-------- 520 (891)
+.+++.+... . .++.+.+++|+++|..++.+. . .+.-.|+++. ..|....
T Consensus 81 ~~lA~l~g~e-~-alv~p~~~sGt~A~~~al~al----l---------------~pGD~Vl~~~~~~y~~~~~~~g~~~~ 139 (427)
T 3hvy_A 81 RVYANIFNTE-S-AFVRPHFVNGTHAIGAALFGN----L---------------RPNDTMMSICGMPYDTLHDIIGMDDS 139 (427)
T ss_dssp HHHHHHHTCS-E-EEEETTCCSHHHHHHHHHHHT----C---------------CTTCEEEECSSSCCGGGHHHHTCCTT
T ss_pred HHHHHHhCCC-c-eEEeCCCCcHHHHHHHHHHHh----c---------------CCCCEEEEeCCCCchhHHHHhccccc
Confidence 3444444432 2 244332678899988776652 1 1122355554 4454333
Q ss_pred ---HHHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEecCC----ccc-----------hhh--h-----
Q psy852 521 ---KAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLG----TTS-----------CYR--K----- 575 (891)
Q Consensus 521 ---Kaa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~VvataG----TT~-----------c~~--~----- 575 (891)
..+...|++++.+|. ++|.+|+++|+++|++.. +...+++..+.| .|. |++ +
T Consensus 140 ~~~~~l~~~G~~~~~v~~-~~~~~d~e~l~~~i~~~~--~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~li 216 (427)
T 3hvy_A 140 KKVGSLREYGVKYKMVDL-KDGKVDINTVKEELKKDD--SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVF 216 (427)
T ss_dssp CCSCCTGGGTCEEEECCC-BTTBCCHHHHHHHHHHCT--TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEE
T ss_pred hhhhHHHHcCCEEEEecC-CCCCcCHHHHHHHhhCCC--CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEE
Confidence 333446889999999 789999999999998410 112334444222 221 444 2
Q ss_pred hcC-----C-------CCccEEEEcCcccCCc---ccccEEEEEeCCccchhhhcc--CCCccccCCCCCccccCCcccc
Q psy852 576 SQG-----I-------EYADSFNVNVNKWLLT---AFDSSCLWVADRYKLTSALVV--DPLYLQHGHEGAIDYRHWGIPL 638 (891)
Q Consensus 576 ldG-----i-------~~aDSIs~d~HK~L~~---P~g~G~llvR~~~~L~~~l~~--~~~Yl~~~~e~~~~~~~~ti~~ 638 (891)
+|. + ..+|.++.+.||++++ |.| |+++.+ ++.+.. +.. ....+ +...
T Consensus 217 vD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~G-G~i~~~-~~li~~-l~~~~~~~~~-------------g~~~ 280 (427)
T 3hvy_A 217 VDNCYGEFVEEKEPTDVGADIIAGSLIKNIGGGIATTG-GYIAGK-EEYVTQ-ATFRVTVPGI-------------GGEC 280 (427)
T ss_dssp EECTTCTTTSSSCGGGGTCSEEEEETTSGGGTTTCCSC-EEEEEC-HHHHHH-HHHHHSCTTT-------------GGGC
T ss_pred EECCccccccCCCCcccCCeEEEECCcccccccccceE-EEEEEC-HHHHHH-HHHHhhcCCc-------------cccc
Confidence 221 1 1389999999999987 443 666654 333322 211 11111 0000
Q ss_pred cccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCcee-----EEEEEecCCcchhhhhhHHHH
Q psy852 639 SRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLG-----LVCFRLRSENNLIADQNNRKL 713 (891)
Q Consensus 639 SRr~~aL~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-----iV~Fr~~~~~~~~~d~ln~~L 713 (891)
+-.+. ..|..++ |..-...++++..++++++++.|++.+ +++... ... +++|.+.+ ++...++
T Consensus 281 ~~~~~--~a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~g-~~V~p~-~~~~~~~li~~~~l~~------~~~~~~f 348 (427)
T 3hvy_A 281 GSTFG--VMRSLYE--GLFMAPHVTIEAVKGAVFCARIMELAG-FDVLPK-YNDKRTDIIQAIKFND------EKKLIDF 348 (427)
T ss_dssp CCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEESC-TTSCCSSSEEEEECSS------HHHHHHH
T ss_pred CCCHH--HHHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhCC-CeecCC-CCCCCceEEEEEeCCC------HHHHHHH
Confidence 00011 1344444 445556788899999999999999875 576432 233 88898852 3455677
Q ss_pred HHHHHhC
Q psy852 714 LEDINAS 720 (891)
Q Consensus 714 ~~~L~~~ 720 (891)
.+.|...
T Consensus 349 ~~~l~~~ 355 (427)
T 3hvy_A 349 IKGIQTA 355 (427)
T ss_dssp HHHHHHT
T ss_pred HHHhccc
Confidence 7777764
No 440
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=97.40 E-value=0.0038 Score=71.05 Aligned_cols=58 Identities=14% Similarity=0.042 Sum_probs=46.0
Q ss_pred HHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCCc
Q psy852 179 GATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 179 ~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~ 238 (891)
+++|++.+++.. ...+.+|++.-.++..|.+-| +++|+++|++||++|++|-++.|+.
T Consensus 205 ~~~le~~i~~~~--~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g 266 (459)
T 4a6r_A 205 ARWLEEKILEIG--ADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFG 266 (459)
T ss_dssp HHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred HHHHHHHHHHcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 788998887421 122467777777788888888 9999999999999999999997643
No 441
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=97.37 E-value=0.00043 Score=76.21 Aligned_cols=284 Identities=12% Similarity=0.062 Sum_probs=178.5
Q ss_pred HHHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHH----H
Q psy852 446 CELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVE----K 521 (891)
Q Consensus 446 lelAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~----K 521 (891)
.++.+.+++.+...+.-+++ +++|+++++..++.+++.... .+.-.|+++..+|++.. .
T Consensus 70 ~~l~~~la~~~~~~~~~~v~--~~~g~t~a~~~~~~~~~~~~~---------------~~gd~vl~~~~~~~~~~~~~~~ 132 (406)
T 1kmj_A 70 ENVRKRASLFINARSAEELV--FVRGTTEGINLVANSWGNSNV---------------RAGDNIIISQMEHHANIVPWQM 132 (406)
T ss_dssp HHHHHHHHHHTTCSCGGGEE--EESSHHHHHHHHHHHTHHHHC---------------CTTCEEEEETTCCGGGTHHHHH
T ss_pred HHHHHHHHHHcCCCCCCeEE--EeCChhHHHHHHHHHhhhhcC---------------CCCCEEEEecccchHHHHHHHH
Confidence 44555666666551222555 678999999999988763211 01234777777877653 3
Q ss_pred HHHHcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEec---CCccc--------hhhh-----hcCC------
Q psy852 522 AAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTT---LGTTS--------CYRK-----SQGI------ 579 (891)
Q Consensus 522 aa~l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vvat---aGTT~--------c~~~-----ldGi------ 579 (891)
.+...|.+++.+|.++++.+|+++|+++|++.+ ..+++... .|... |+++ +|++
T Consensus 133 ~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~----~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~ 208 (406)
T 1kmj_A 133 LCARVGAELRVIPLNPDGTLQLETLPTLFDEKT----RLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHH 208 (406)
T ss_dssp HHHHHTCEEEEECBCTTSCBCGGGHHHHCCTTE----EEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTS
T ss_pred HHHhCCCEEEEEecCCCCCcCHHHHHHHhccCC----eEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCC
Confidence 345678899999999899999999999997532 12223222 24443 4431 2221
Q ss_pred ------CCccEEEEcCcccCCcccccEEEEEeCCccchhhhcc-CCCcc--ccCCCC---CccccCCccc-ccccc-cch
Q psy852 580 ------EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV-DPLYL--QHGHEG---AIDYRHWGIP-LSRRF-RSL 645 (891)
Q Consensus 580 ------~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~-~~~Yl--~~~~e~---~~~~~~~ti~-~SRr~-~aL 645 (891)
-.+|.++.++||++ +|.|+|+++++++ +.+.+.. ...+. ...... .+......+. ++... ..+
T Consensus 209 ~~~~~~~~~d~~~~s~~K~~-g~~G~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (406)
T 1kmj_A 209 PVDVQALDCDFYVFSGHKLY-GPTGIGILYVKEA--LLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGII 285 (406)
T ss_dssp CCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECHH--HHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHH
T ss_pred CCcccccCCCEEEEEchhcc-CCCCcEEEEEeHH--HHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHH
Confidence 13799999999977 6888999998743 2222211 00000 000000 0000000111 11111 122
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEE
Q psy852 646 KLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV-RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLH 724 (891)
Q Consensus 646 ~lW~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~ 724 (891)
.+..+++.+...++.+..++..++++++.+.|++.++++++.+. ..++++|.+++. ....+.+.|.+.|+.+
T Consensus 286 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v 358 (406)
T 1kmj_A 286 GLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKH-------HAYDVGSFLDNYGIAV 358 (406)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTC-------CHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCC-------CHHHHHHHHhhCCcEE
Confidence 33355666666688888999999999999999998899988653 678889987532 2456788888899876
Q ss_pred Eeecc--------ccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 725 MVPAS--------QEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 725 ~s~s~--------~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..+.. ......+ ++++..+|++|+++++++|+++..
T Consensus 359 ~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~ 403 (406)
T 1kmj_A 359 RTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR 403 (406)
T ss_dssp EEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 54432 1123567 999999999999999999998864
No 442
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=97.34 E-value=0.001 Score=71.93 Aligned_cols=132 Identities=11% Similarity=0.001 Sum_probs=85.4
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHH--HHHHHH
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSC--VEKAAM 524 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~S--v~Kaa~ 524 (891)
++.+.+++.+...+.-+++ +++|+++++..++.+... + .+++....|++ ....+.
T Consensus 47 ~~~~~la~~~g~~~~~~v~--~~~g~t~al~~~~~~l~~-------------------~--~~i~~~~~~~~~~~~~~~~ 103 (362)
T 3ffr_A 47 TASDNLKTLLELPSNYEVL--FLASATEIWERIIQNCVE-------------------K--KSFHCVNGSFSKRFYEFAG 103 (362)
T ss_dssp HHHHHHHHHTTCCTTEEEE--EESCHHHHHHHHHHHHCS-------------------S--EEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcEEE--EeCCchHHHHHHHHhccC-------------------C--cEEEEcCcHHHHHHHHHHH
Confidence 3444556666443333566 678999999888765321 1 34445555655 233455
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc--------hhhh------hcC---------
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS--------CYRK------SQG--------- 578 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~--------c~~~------ldG--------- 578 (891)
..|.+++.+|.+.++.+|+++|+ +++. ...++++. ..|+.. |+++ +|+
T Consensus 104 ~~g~~~~~v~~~~~~~~d~~~l~--~~~~----~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~ 177 (362)
T 3ffr_A 104 ELGREAYKEEAAFGKGFYPADIT--VPAD----AEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKF 177 (362)
T ss_dssp HTTCEEEEEECCTTCCCCGGGCC--CCTT----CCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCC
T ss_pred HhCCCeEEEecCCCCCCCHHHHh--ccCC----ccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCccc
Confidence 67889999999989999999998 3322 12233332 345543 5443 232
Q ss_pred -CCCccEEEEcCcccCCcccccEEEEEeCC
Q psy852 579 -IEYADSFNVNVNKWLLTAFDSSCLWVADR 607 (891)
Q Consensus 579 -i~~aDSIs~d~HK~L~~P~g~G~llvR~~ 607 (891)
+..+|.+++++|||+++|.|+|+++++++
T Consensus 178 ~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~ 207 (362)
T 3ffr_A 178 DWTKIDSVFFSVQKCFGLPAGLGVWILNDR 207 (362)
T ss_dssp CTTSCSEEEEETTSTTCCCSCCEEEEEEHH
T ss_pred ChhHCcEEEEecccccCCCCceEEEEECHH
Confidence 23389999999999999999999888764
No 443
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=97.34 E-value=0.0004 Score=77.43 Aligned_cols=237 Identities=9% Similarity=0.041 Sum_probs=134.5
Q ss_pred CCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC-CC-CCCcCHHHH
Q psy852 469 RSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP-DD-KNSLRGATL 546 (891)
Q Consensus 469 tsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~-d~-~G~mD~~~L 546 (891)
++|+++++..++..++.. . +.-.|+++.-.|.+....+...|.+++.+|. ++ ++.+|+++|
T Consensus 104 t~g~~~a~~~~~~~~~~~--~---------------~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 166 (412)
T 1yaa_A 104 SLSGTGALHISAKFFSKF--F---------------PDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGF 166 (412)
T ss_dssp EEHHHHHHHHHHHHHHHH--C---------------TTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHH
T ss_pred ccchHhHHHHHHHHHHHh--C---------------CCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHH
Confidence 788999988875443321 0 1113677777888888888888899999998 53 688999999
Q ss_pred HHHHHhhhhcCCccEEEEe----cCCccc-----------hhhh-----h---------cC-------C-----CCc---
Q psy852 547 RQVMQQDETMGYIPFFVST----TLGTTS-----------CYRK-----S---------QG-------I-----EYA--- 582 (891)
Q Consensus 547 e~aI~~d~~~g~ip~~Vva----taGTT~-----------c~~~-----l---------dG-------i-----~~a--- 582 (891)
++++++.. ....++++. ..|+.. |.++ + .+ + ...
T Consensus 167 ~~~l~~~~--~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (412)
T 1yaa_A 167 LNAIQKAP--EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVS 244 (412)
T ss_dssp HHHHHHSC--TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTC
T ss_pred HHHHHhCC--CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCc
Confidence 99997631 111233322 245542 3321 1 11 1 011
Q ss_pred -cEEEEcCcccCCcccc--cEEEE--E----eCCcc---chhhhccCCCccccCCCCCccccCCcccccccccchHHHHH
Q psy852 583 -DSFNVNVNKWLLTAFD--SSCLW--V----ADRYK---LTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFV 650 (891)
Q Consensus 583 -DSIs~d~HK~L~~P~g--~G~ll--v----R~~~~---L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~ 650 (891)
+-+..+.||.++ |.| +|+++ . ++++. +.+.+.. ..+.. + + ....+.++++
T Consensus 245 ~~i~~~s~sK~~~-~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~---------~----~-~~~~~~~~a~ 306 (412)
T 1yaa_A 245 PVFVCQSFAKNAG-MYGERVGCFHLALTKQAQNKTIKPAVTSQLAK---IIRSE---------V----S-NPPAYGAKIV 306 (412)
T ss_dssp CEEEEEECTTTSC-CGGGCEEEEEEECCSCTTHHHHHHHHHHHHHH---HHHTT---------T----S-SCCHHHHHHH
T ss_pred ceEEEeccCCCCC-CcCCcceEEEEEecCCCCCHHHHHHHHHHHHH---HHhhc---------c----C-CCChHHHHHH
Confidence 234668999887 545 78887 4 24331 2121111 00000 0 0 0011223333
Q ss_pred HHHHH--------HhhHHHHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHh
Q psy852 651 IRTYG--------LSGLQKYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINA 719 (891)
Q Consensus 651 L~~lG--------~~G~~~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~ 719 (891)
...+. .+.+++..++..++++++.+.|++.+ ++++.. +..+.+.|. +. + .+.+...+.+
T Consensus 307 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~-----~--~~~~~~~l~~ 376 (412)
T 1yaa_A 307 AKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIV-NQCGMFSFT--GL-----T--PQMVKRLEET 376 (412)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHH-HCCSSEEEC--CC-----C--HHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeec-cCceEEEee--CC-----C--HHHHHHHHHh
Confidence 33332 23567777788889999999998764 366543 333433332 22 1 2345445556
Q ss_pred CCcEEEeeccccCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy852 720 SGRLHMVPASQEQNDEVFELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 720 ~G~~~~s~s~~~g~~~l~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.|+.+. + .+.++++. .++++++++++.|+++..
T Consensus 377 ~gi~v~-~------~~Ris~~~-~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 377 HAVYLV-A------SGRASIAG-LNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp HCEECC-T------TSEEEGGG-CCTTTHHHHHHHHHHHHH
T ss_pred CCEEec-c------CcEEEEcc-CCHhHHHHHHHHHHHHHH
Confidence 787632 2 12277764 589999999999998763
No 444
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=97.06 E-value=0.0037 Score=69.23 Aligned_cols=124 Identities=10% Similarity=-0.029 Sum_probs=71.1
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEeccc---chHHHHHHHH
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKE---AHSCVEKAAM 524 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~---aH~Sv~Kaa~ 524 (891)
+++.+++.+...+.=+++ +++||++++..++.+. +. + .|+++.. .|+++..++.
T Consensus 63 ~~~~~a~~~g~~~~~~~~--~~~ggt~a~~~~~~~~-----~g---------------d-~Vl~~~~~y~~~~~~~~~~~ 119 (374)
T 2aeu_A 63 VNEYGLKHLGGDENDKCV--GFNRTSSAILATILAL-----KP---------------K-KVIHYLPELPGHPSIERSCK 119 (374)
T ss_dssp HHHHHHHHHTCCTTEEEE--EESSHHHHHHHHHHHH-----CC---------------S-EEEEECSSSSCCTHHHHHHH
T ss_pred HHHHHHHHhCCCCcceEE--EEcChHHHHHHHHHhC-----CC---------------C-EEEEecCCCCccHHHHHHHH
Confidence 333444555432111444 6789999999888764 11 1 2455544 5667666667
Q ss_pred HcCceEEEecCCCCCCcCHHHHHHHHHhhhhcCCcc-EEEEe---cCC-ccc--------hhhh-------------h--
Q psy852 525 MAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIP-FFVST---TLG-TTS--------CYRK-------------S-- 576 (891)
Q Consensus 525 l~gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip-~~Vva---taG-TT~--------c~~~-------------l-- 576 (891)
..|.+++.+ +|+++|+++ +++ ... ++++. ..| +.. |+++ .
T Consensus 120 ~~g~~~~~v-------~d~~~l~~~-~~~----~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~ 187 (374)
T 2aeu_A 120 IVNAKYFES-------DKVGEILNK-IDK----DTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRL 187 (374)
T ss_dssp HTTCEEEEE-------SCHHHHHTT-CCT----TEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHH
T ss_pred HcCcEEEEe-------CCHHHHHhc-CCC----ccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCccccccc
Confidence 778888777 388888876 321 112 22222 224 222 3321 1
Q ss_pred cCCC------CccEEEEcCcccCCcccccEEEEEeCC
Q psy852 577 QGIE------YADSFNVNVNKWLLTAFDSSCLWVADR 607 (891)
Q Consensus 577 dGi~------~aDSIs~d~HK~L~~P~g~G~llvR~~ 607 (891)
.... .+|.+..++||++.+| ..|+++.+++
T Consensus 188 ~~~~~~~~~~~~di~~~S~sK~l~g~-~~G~~~~~~~ 223 (374)
T 2aeu_A 188 LFNQPPALKLGADLVVTSTDKLMEGP-RGGLLAGKKE 223 (374)
T ss_dssp HTTCCCHHHHTCSEEEEETTSSSSSC-SCEEEEEEHH
T ss_pred ccccCCccccCCcEEEecCcccccCc-ceEEEEECHH
Confidence 0111 3689999999998765 8898887653
No 445
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=97.03 E-value=0.01 Score=68.13 Aligned_cols=160 Identities=8% Similarity=-0.018 Sum_probs=80.9
Q ss_pred CCCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHh
Q psy852 578 GIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLS 657 (891)
Q Consensus 578 Gi~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~ 657 (891)
|+. .|-+++. |.++.-++.|++..+.+ +.+.+........+ ..|+. +-+..+...-++|+.+-.+
T Consensus 277 gv~-PDi~t~g--K~lggG~Piga~~~~~e--i~~~~~~~~~~~~h---------~~T~~-gnPla~AAala~L~~l~~~ 341 (454)
T 4ao9_A 277 GIR-SDLTTLG--KYIGGGMSFGAFGGRAD--VMALFDPRTGPLAH---------SGTFN-NNVMTMAAGYAGLTKLFTP 341 (454)
T ss_dssp TCC-CSEEEEE--GGGGTTSSCEEEEECHH--HHGGGCTTTCSCCC---------CCTTT-TCHHHHHHHHHHHHHTSCH
T ss_pred CCC-CcEEEec--cccCCCCcceeeeeHHH--HHHHHhhccCCccc---------cCCCC-CCHHHHHHHHHHHHHHhcc
Confidence 443 5887765 66655567799988865 22322211111101 11221 1122222333445544433
Q ss_pred hHHHHHHHHHHHHHHHHHHhccC-CCcEEeCCC-c-eeEEEEEecCCc---ch---hh-hhhHHHHHHHHHhCCcEEEee
Q psy852 658 GLQKYIRRHCELAKLFEGKVRRD-PRFEISNDV-R-LGLVCFRLRSEN---NL---IA-DQNNRKLLEDINASGRLHMVP 727 (891)
Q Consensus 658 G~~~~i~~~~~lA~~L~~~L~~~-~~~eil~~~-~-~~iV~Fr~~~~~---~~---~~-d~ln~~L~~~L~~~G~~~~s~ 727 (891)
+.+++..++.++|.++|+++ ....+..+. . -.++.+.+.... .. .. ..+...+...|.++|++ +.+
T Consensus 342 ---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~-~~p 417 (454)
T 4ao9_A 342 ---EAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIY-SSP 417 (454)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEE-CCT
T ss_pred ---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEE-EcC
Confidence 34555666777777777653 111111111 1 135555554321 11 11 23445677788889976 222
Q ss_pred ccccCCeEEEEecCCCCHHHHHHHHHHHHHHHHHH
Q psy852 728 ASQEQNDEVFELQERKRKDDLAYKRSFFVRMLGLV 762 (891)
Q Consensus 728 s~~~g~~~l~sv~~~tT~edId~li~~L~ei~~~~ 762 (891)
. .. +.+....|++|||+++++|++++...
T Consensus 418 ~----~~--~~~s~~~T~~dId~~l~al~~~l~~~ 446 (454)
T 4ao9_A 418 R----GF--VVLSLPLTDADIDRYVAAIGSFIGGH 446 (454)
T ss_dssp T----CE--EECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred C----CC--EEEeCCCCHHHHHHHHHHHHHHHHhc
Confidence 1 11 22334468999999999999987543
No 446
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=97.02 E-value=0.0051 Score=68.38 Aligned_cols=241 Identities=10% Similarity=0.016 Sum_probs=132.4
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC--CCCCCcCHHH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP--DDKNSLRGAT 545 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~--d~~G~mD~~~ 545 (891)
.+.++++++..+...++.. ..+.-.|++..-.|.+....+...|.+++.+|. ++++.+|+++
T Consensus 109 ~~~~g~ga~~~~~~~~~~~----------------~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 172 (409)
T 4eu1_A 109 QTLGGTGALRIGGDLLNRF----------------VANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAG 172 (409)
T ss_dssp EESHHHHHHHHHHHHGGGT----------------SSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHH
T ss_pred ecccchHHHHHHHHHHHHh----------------cCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHH
Confidence 3677788877655443221 112235788888899998888899999999998 4568999999
Q ss_pred HHHHHHhhhhcCCccEEEE----ecCCccc-----------hhhh-----hc---------C-----C-------CCccE
Q psy852 546 LRQVMQQDETMGYIPFFVS----TTLGTTS-----------CYRK-----SQ---------G-----I-------EYADS 584 (891)
Q Consensus 546 Le~aI~~d~~~g~ip~~Vv----ataGTT~-----------c~~~-----ld---------G-----i-------~~aDS 584 (891)
|++++++... ...++++ +..|++. |.++ +| + . ...+.
T Consensus 173 l~~~l~~~~~--~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (409)
T 4eu1_A 173 MLECLDKAPE--GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNL 250 (409)
T ss_dssp HHHHHHHSCT--TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCC
T ss_pred HHHHHHhCCC--CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcE
Confidence 9999975311 1223332 2355553 3321 01 0 0 11233
Q ss_pred E-EEcCcccCCcc-cccEEE--EEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH-----
Q psy852 585 F-NVNVNKWLLTA-FDSSCL--WVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG----- 655 (891)
Q Consensus 585 I-s~d~HK~L~~P-~g~G~l--lvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG----- 655 (891)
| ..+.+|.++.| ..+|++ ++.+++........-..+.+.. +. ....+.++++...+.
T Consensus 251 i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~----------~~----~~~~~~~~~~~~~l~~~~~~ 316 (409)
T 4eu1_A 251 IVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPM----------YN----NPPLYGAWVVSSILKDPQLT 316 (409)
T ss_dssp EEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHH----------HS----SCCHHHHHHHHHHHHCHHHH
T ss_pred EEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhh----------cC----CCChHHHHHHHHHhCCHHHH
Confidence 3 44788988755 457887 6665542111100000000000 00 001233444444333
Q ss_pred ---HhhHHHHHHHHHHHHHHHHHHhccCCC---cEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHH-hCCcEEEeec
Q psy852 656 ---LSGLQKYIRRHCELAKLFEGKVRRDPR---FEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDIN-ASGRLHMVPA 728 (891)
Q Consensus 656 ---~~G~~~~i~~~~~lA~~L~~~L~~~~~---~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~-~~G~~~~s~s 728 (891)
.+.+.+..++..++++++.+.|++.+. +++.. ++.+.+.| .+. +..+...|. +.|+++. +.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~--~~~--------~~~~~~~ll~~~gv~v~-p~ 384 (409)
T 4eu1_A 317 ALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIE-RQVGMMAY--TGL--------TREQVELLRSEYHIYMT-LN 384 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHH-HSCSSEEE--CCC--------CHHHHHHHHHHHCEECC-TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceec-CCceEEEE--eCC--------CHHHHHHHHHcCCEEEc-CC
Confidence 344667777888899999999987631 44432 33344333 221 123344544 5687632 21
Q ss_pred cccCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy852 729 SQEQNDEVFELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 729 ~~~g~~~l~sv~~~tT~edId~li~~L~ei~ 759 (891)
..+++... ++++|++++++|+++.
T Consensus 385 ------~Ri~~~~~-~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 385 ------GRAAVSGL-NSTNVEYVSQAIHNVT 408 (409)
T ss_dssp ------CEEEGGGC-CTTTHHHHHHHHHHHH
T ss_pred ------CEEEEEec-CHhhHHHHHHHHHHHh
Confidence 13666544 4566999999998764
No 447
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=96.86 E-value=0.014 Score=65.30 Aligned_cols=154 Identities=7% Similarity=-0.007 Sum_probs=81.4
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccCC-CccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDP-LYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQ 660 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~-~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~ 660 (891)
.|-+| .+|+++..+.+|+++.+++ +.+.+.... .+. ..+... -++.......+++.+.. ..
T Consensus 259 ~di~s--~sK~l~~G~~~G~~~~~~~--~~~~~~~~~~~~~-----------~~t~~~-~~~~~aaa~aal~~~~~--~~ 320 (424)
T 2e7u_A 259 PDLVT--LGKILGGGLPAAAYAGRRE--IMEKVAPLGPVYQ-----------AGTLSG-NPLAMAAGLATLELLEE--NP 320 (424)
T ss_dssp CSEEE--ECGGGGTTSSCEEEEECHH--HHTTBTTTSSBCC-----------CCTTCS-CHHHHHHHHHHHHHHHH--CT
T ss_pred cchhh--hhhhhhCCcceEEEEEcHH--HHhhhcccCCccc-----------CCCCCC-CHHHHHHHHHHHHHHHh--cc
Confidence 57664 4699987678899988753 222221100 000 001111 01112222333443322 24
Q ss_pred HHHHHHHHHHHHHHHHhccCC---CcEEeCCCceeEEEEEecCCcchh-------hhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 661 KYIRRHCELAKLFEGKVRRDP---RFEISNDVRLGLVCFRLRSENNLI-------ADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 661 ~~i~~~~~lA~~L~~~L~~~~---~~eil~~~~~~iV~Fr~~~~~~~~-------~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
+..++..++++++.+.|++.. ++....++..+++.+.+.+..... -.....++.+.|.+.|+++..+. .
T Consensus 321 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~-~ 399 (424)
T 2e7u_A 321 GYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSN-F 399 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSS-S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccC-C
Confidence 566677778888888887641 221111233457778775311000 01245678888888897743221 1
Q ss_pred cCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy852 731 EQNDEVFELQERKRKDDLAYKRSFFVRM 758 (891)
Q Consensus 731 ~g~~~l~sv~~~tT~edId~li~~L~ei 758 (891)
.. +.++...|++|++++++.|++.
T Consensus 400 --~~--~~~~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 400 --EA--AFLSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp --SC--EECCTTCCHHHHHHHHHHHHHH
T ss_pred --Cc--eEeeccCCHHHHHHHHHHHHHh
Confidence 11 3445678999999999999864
No 448
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=96.81 E-value=0.016 Score=66.43 Aligned_cols=61 Identities=5% Similarity=-0.036 Sum_probs=48.5
Q ss_pred ccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCC
Q psy852 177 LRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGS 237 (891)
Q Consensus 177 id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~ 237 (891)
.|+++|++.|++....+..+.+|++....+++|.+-| +++|+++|++||++||+|.+|.|+
T Consensus 240 ~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~ 304 (472)
T 1ohv_A 240 RCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGG 304 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCC
Confidence 4789999999763221113567777777888999888 999999999999999999999763
No 449
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=96.65 E-value=0.0064 Score=68.77 Aligned_cols=246 Identities=8% Similarity=-0.076 Sum_probs=137.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+.... . . .+...+.-.|+++.-.|......+...|.+++. ..+|
T Consensus 125 ~iv--~t~G~~~al~~~~~~l~~~---~-~-------~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~------~~~d 185 (427)
T 2hox_A 125 YIV--FGVGVTQLIHGLVISLSPN---M-T-------ATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV------WAGN 185 (427)
T ss_dssp EEE--EESHHHHHHHHHHHHHSCC---T-T-------TCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE------EEEE
T ss_pred EEE--EeCCHHHHHHHHHHHHhhc---c-c-------cccCCCCCEEEEeCCCcccHHHHHHHcCCeeee------ecCC
Confidence 566 6788899988777654100 0 0 000112235788888899998888887766542 4577
Q ss_pred HHHHHHHHHhhhhcCCccEEEE---ecCCccc---hhh--------hhc------CC-CCccEEEEcCcccCCcc-cccE
Q psy852 543 GATLRQVMQQDETMGYIPFFVS---TTLGTTS---CYR--------KSQ------GI-EYADSFNVNVNKWLLTA-FDSS 600 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~---c~~--------~ld------Gi-~~aDSIs~d~HK~L~~P-~g~G 600 (891)
+++|++++++.+ ..++++ +-.|++. |.. ..+ .+ ...|-+..++||.++.| .-+|
T Consensus 186 ~~~l~~~~~~~~----k~v~l~~p~NPtG~~~~~~l~~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG 261 (427)
T 2hox_A 186 AANYVNVSNPEQ----YIEMVTSPNNPEGLLRHAVIKGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFG 261 (427)
T ss_dssp GGGGTTCSCGGG----EEEEEESSCTTTCCCCCCSSTTCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCE
T ss_pred HHHHHHhhcCCc----eEEEEcCCCCCcccccHHHHcCCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEE
Confidence 888887775421 122332 1245432 110 001 11 23578888999988755 3389
Q ss_pred EEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH-------------hhHHHHHHHHH
Q psy852 601 CLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL-------------SGLQKYIRRHC 667 (891)
Q Consensus 601 ~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~-------------~G~~~~i~~~~ 667 (891)
+++.++++.+........ +. .+ ....+.++++...+.. +-+++..+...
T Consensus 262 ~~~~~~~~l~~~l~~~~~-~~-----------~~------~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~ 323 (427)
T 2hox_A 262 WALIKDESVYNNLLNYMT-KN-----------TE------GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLR 323 (427)
T ss_dssp EEEECCHHHHHHHHHHHH-HH-----------TS------SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHH-hc-----------CC------CCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHH
Confidence 998875543322111100 00 00 0112333333333321 12334456667
Q ss_pred HHHHHHHHHhccCCCcEE--eC-C----------Cc-eeEEEEEecCCcchhhhhhHHHHHHHH-HhCCcEEEeecccc-
Q psy852 668 ELAKLFEGKVRRDPRFEI--SN-D----------VR-LGLVCFRLRSENNLIADQNNRKLLEDI-NASGRLHMVPASQE- 731 (891)
Q Consensus 668 ~lA~~L~~~L~~~~~~ei--l~-~----------~~-~~iV~Fr~~~~~~~~~d~ln~~L~~~L-~~~G~~~~s~s~~~- 731 (891)
+..++|.+.|++.+++++ +. + |+ ...+++++.+ ...++.+.| .+.|+.+..+....
T Consensus 324 ~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~--------~~~~~~~~ll~~~gI~v~pg~~f~~ 395 (427)
T 2hox_A 324 ERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW--------EEDKDCYQTFQNGRINTQNGVGFEA 395 (427)
T ss_dssp HHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS--------GGGCSHHHHHHHTTEECEEGGGGTS
T ss_pred HHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCC--------cHHHHHHHHHHHCCEEEcCCCccCC
Confidence 788999999998888876 22 1 11 3456667743 123455555 46788765554443
Q ss_pred CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 732 QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 732 g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
+...+ +++.. ++++++++++.|.+++
T Consensus 396 ~~~~~Ris~~~--~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 396 SSRYVRLSLIK--TQDDFDQLMYYLKDMV 422 (427)
T ss_dssp CTTEEEEECSS--CHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 34566 88874 8889999998888765
No 450
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=96.61 E-value=0.023 Score=63.22 Aligned_cols=238 Identities=11% Similarity=-0.011 Sum_probs=132.8
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +|+|+++++..++.+... . | ......|+++.-.|.+...++...|.+++.+|.|.++-..
T Consensus 93 ~i~--~t~G~~~al~~~~~~l~~----~----------G-d~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~ 155 (391)
T 3bwn_A 93 YIV--VGTGSTQLCQAAVHALSS----L----------A-RSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAWGFDK 155 (391)
T ss_dssp EEE--EEEHHHHHHHHHHHHHHH----T----------S-SSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEESTTCCC
T ss_pred eEE--EeCChHHHHHHHHHHhcC----C----------C-CCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHHHcCC
Confidence 566 688999998877765421 1 1 0011258888889999988888877777777766543210
Q ss_pred HHHHHHHHHhhhhcCCccEEEEe---cCCccc---hhh-h-------------------hcCCCCccEEEEcCcccCCcc
Q psy852 543 GATLRQVMQQDETMGYIPFFVST---TLGTTS---CYR-K-------------------SQGIEYADSFNVNVNKWLLTA 596 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g~ip~~Vva---taGTT~---c~~-~-------------------ldGi~~aDSIs~d~HK~L~~P 596 (891)
+ +...+++++ -.|++. |.+ + +......+-+..++||.++.|
T Consensus 156 ---------~----~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~~~~~l~~~~~~~i~~~S~SK~~g~~ 222 (391)
T 3bwn_A 156 ---------K----GPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWPHYTPITRRQDHDIMLFTFSKITGHA 222 (391)
T ss_dssp ---------C----SCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCSTTTSCCCCCBCCSEEEEEHHHHHSCG
T ss_pred ---------C----CCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCCCCCccccCCCCeEEEEechhhcCCC
Confidence 0 111122221 133332 211 0 111122356677899987755
Q ss_pred -cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHH------------HhhHHHHH
Q psy852 597 -FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYG------------LSGLQKYI 663 (891)
Q Consensus 597 -~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG------------~~G~~~~i 663 (891)
.-+|++++.++..+. .+.....+. .+ ....+.++++...+. ...+++..
T Consensus 223 GlRiG~~~~~~~~l~~-~l~~~~~~~-----------~~------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 284 (391)
T 3bwn_A 223 GSRIGWALVKDKEVAK-KMVEYIIVN-----------SI------GVSKESQVRTAKILNVLKETCKSESESENFFKYGR 284 (391)
T ss_dssp GGCEEEEEECCHHHHH-HHHHHHHHH-----------HS------SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHH
T ss_pred ccceEEEEecCHHHHH-HHHHHhccc-----------cc------CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHH
Confidence 336888875443322 121100000 00 011233333333332 23466677
Q ss_pred HHHHHHHHHHHHHhccCCCcEEeCCCce-------------eEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc
Q psy852 664 RRHCELAKLFEGKVRRDPRFEISNDVRL-------------GLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ 730 (891)
Q Consensus 664 ~~~~~lA~~L~~~L~~~~~~eil~~~~~-------------~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~ 730 (891)
+...++++++.+.|++.+++++..+... ..+++++... +.+...|.+.|+.+..+...
T Consensus 285 ~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~---------~~~~~~l~~~gV~v~pg~~f 355 (391)
T 3bwn_A 285 EMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE---------TDLVSELRRHKVMSRAGERC 355 (391)
T ss_dssp HHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS---------CCHHHHHHHTTEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH---------HHHHHHHHHCCEEEccCCCC
Confidence 7778889999999998877776543211 1466666421 24556677889886655544
Q ss_pred c-CCeEE-EEecCCCCHHHHHHHHHHHHHHH
Q psy852 731 E-QNDEV-FELQERKRKDDLAYKRSFFVRML 759 (891)
Q Consensus 731 ~-g~~~l-~sv~~~tT~edId~li~~L~ei~ 759 (891)
. +...+ ++++. ++++++++++.|++++
T Consensus 356 g~~~~~iRis~~~--~~e~i~~~~~~L~~~~ 384 (391)
T 3bwn_A 356 GSDKKHVRVSMLS--REDVFNVFLERLANMK 384 (391)
T ss_dssp TCCTTEEEEESCS--CHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 2 24456 88873 8999999999887654
No 451
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=96.17 E-value=0.31 Score=55.81 Aligned_cols=156 Identities=12% Similarity=0.041 Sum_probs=85.6
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQK 661 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~ 661 (891)
-|-+++. |.+++-++.|+++.|++. .+.+ .+... ..|+. +-+..+...-++|+.+-.+++.+
T Consensus 288 PDivt~g--K~lggg~P~~av~~~~~i--~~~~--~~~~~-----------~~Tf~-gnpla~aaala~L~~i~~~~l~~ 349 (456)
T 4atq_A 288 PDIITMA--KGIAGGLPLSAITGRADL--LDAV--HPGGL-----------GGTYG-GNPVACAAALAAIDTMEQHDLNG 349 (456)
T ss_dssp CSEEEEC--GGGGTTSSCEEEEEEHHH--HTTS--CTTSS-----------CCSSS-SCHHHHHHHHHHHHHHHHTTHHH
T ss_pred Cchhhhh--hcccCcCCceeeEecHHH--Hhcc--cccCC-----------CCCCC-CChHHHHhhHHHHHHHhhccHHH
Confidence 6988886 667666788999998762 1111 11110 11221 22333344445666666666544
Q ss_pred HHHHHHHHHHHHHHHhccC----CC--cEEeCCCc-e-eEEEEEecCCc-chhhhhhHHHHHHHHHhCCcEEEeeccccC
Q psy852 662 YIRRHCELAKLFEGKVRRD----PR--FEISNDVR-L-GLVCFRLRSEN-NLIADQNNRKLLEDINASGRLHMVPASQEQ 732 (891)
Q Consensus 662 ~i~~~~~lA~~L~~~L~~~----~~--~eil~~~~-~-~iV~Fr~~~~~-~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g 732 (891)
.+ .++.++|.++|+++ +. ..++.+.+ . .++.+.+.... .+.......++...+.++|++.... .. .
T Consensus 350 ~~---~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~-g~-~ 424 (456)
T 4atq_A 350 RA---RHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTC-GT-Y 424 (456)
T ss_dssp HH---HHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEE-CT-T
T ss_pred HH---HHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEec-CC-C
Confidence 44 44555555555442 11 12222211 1 24555554321 1112345678899999999874322 11 2
Q ss_pred CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 733 NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 733 ~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..++ +.+..-+|+++||++++.|++.++
T Consensus 425 ~~~irl~PpL~it~~~id~~l~~l~~al~ 453 (456)
T 4atq_A 425 GNVIRLLPPLVISDELLIDGLEVLAAAIK 453 (456)
T ss_dssp SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 2355 776667899999999999988763
No 452
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=96.12 E-value=0.13 Score=58.83 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=42.3
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccC
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAG 236 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG 236 (891)
|++++++.+++.. .....|++--.-.+.|.+-| +++|.++|++||+++.+|=++.|
T Consensus 206 d~~~l~~~l~~~~---~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG 265 (454)
T 4ao9_A 206 DAQTARAQIERHG---PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS 265 (454)
T ss_dssp CHHHHHHHHHHTG---GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG
T ss_pred hHHHHHHHHhhcC---CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC
Confidence 6889999887642 22445555444555688888 99999999999999999988743
No 453
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=95.97 E-value=0.84 Score=52.44 Aligned_cols=160 Identities=10% Similarity=0.011 Sum_probs=83.9
Q ss_pred ccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHH
Q psy852 582 ADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQ 660 (891)
Q Consensus 582 aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~ 660 (891)
-|-+++. |.++.= ++.|+++.+++. .+.+......... ...+.|.. +-+..+...-.+|+.+-.+++.
T Consensus 298 PDi~t~~--K~l~gG~~Pl~av~~~~~i--~~~~~~~~~~~~~------~~hg~T~~-Gnpla~Aaala~L~~i~~~~l~ 366 (473)
T 4e3q_A 298 PDAIISS--KNLTAGFFPMGAVILGPEL--SKRLETAIEAIEE------FPHGFTAS-GHPVGCAIALKAIDVVMNEGLA 366 (473)
T ss_dssp CSEEEEC--GGGGTTSSCCEEEEECHHH--HHHHHHHHHHHSC------CCCCCTTT-TCHHHHHHHHHHHHHHHHSSHH
T ss_pred CChHHhc--ccccCCCCCcccccccHHH--HHHhccccccccc------cccCCCCC-CCcchhhhhhhhhhhhccccHH
Confidence 5877764 766443 677999998762 2222110000000 00011121 1233333334556666666654
Q ss_pred HHHHHHHHHHHHHHHHhccCCCcEEeCCC-ce-eEEEEEecCCcc-----hhhhhhHHHHHHHHHhCCcEEEeeccccCC
Q psy852 661 KYIRRHCELAKLFEGKVRRDPRFEISNDV-RL-GLVCFRLRSENN-----LIADQNNRKLLEDINASGRLHMVPASQEQN 733 (891)
Q Consensus 661 ~~i~~~~~lA~~L~~~L~~~~~~eil~~~-~~-~iV~Fr~~~~~~-----~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~ 733 (891)
+. ..++.++|.++|+++..-..+.+. .. .++.+.+..... ..-.....++...+.+.|++.. + .+
T Consensus 367 ~~---~~~~g~~l~~~L~~l~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~-~---~g- 438 (473)
T 4e3q_A 367 EN---VRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICR-P---LG- 438 (473)
T ss_dssp HH---HHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECE-E---ET-
T ss_pred HH---HHHHHHHHHHHHHHHhcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEE-e---cC-
Confidence 44 455677777777653211111111 11 244555532210 1112356688899999998732 2 23
Q ss_pred eEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 734 DEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 734 ~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..+ +++...+|++|||++++.|++.+.
T Consensus 439 ~~i~l~PPL~it~~eid~~~~~l~~al~ 466 (473)
T 4e3q_A 439 QSVVLCPPFILTEAQMDEMFDKLEKALD 466 (473)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 345 766667899999999999998874
No 454
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=95.93 E-value=0.065 Score=60.26 Aligned_cols=90 Identities=13% Similarity=-0.007 Sum_probs=68.0
Q ss_pred EEecCCCChHHHHHHHHcCCeEEEEec-CC-CCcccHHHHHHHHHhhhhcCCcceEEEeec-ccCccccccC---HHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVRLKILEP-DD-KNSLRGATLRQVMQQDETMGYIPFFVSTTL-GTTSCCSFDN---LAEIG 218 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~v~~V~~-d~-~g~id~~~L~~~l~~~~~~g~~p~~V~~t~-Gtt~~GavDp---l~~I~ 218 (891)
|++.+-+-......+...|.+++.||. ++ ++.+|+++|++.+++.. .+.++.++. .+|.||.+-+ +++|+
T Consensus 125 Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~i~l~~~~~NPTG~~~s~~~~~~l~ 200 (405)
T 3k7y_A 125 LYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIP----NGSSVILQISCYNPCSVNIEEKYFDEII 200 (405)
T ss_dssp EEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSC----SSCEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred EEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCC----CCeEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 666666666666666778889999998 44 58899999999997531 123555544 5899999855 56778
Q ss_pred HHHHHcCCceeeeccccCCc
Q psy852 219 PVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG~~ 238 (891)
++|+++++++..|-+|+++.
T Consensus 201 ~~~~~~~~~vi~De~Y~~l~ 220 (405)
T 3k7y_A 201 EIVLHKKHVIIFDIAYQGFG 220 (405)
T ss_dssp HHHHHHCCEEEEEESCTTTS
T ss_pred HHHHHCCeEEEEecCccccc
Confidence 89999999999999996643
No 455
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=94.83 E-value=0.0014 Score=75.38 Aligned_cols=154 Identities=7% Similarity=-0.091 Sum_probs=80.1
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhcc---CCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhh
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVV---DPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSG 658 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~---~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G 658 (891)
.|-++ ..|+++..+.+|+++.+++ +.+.+.. ...+. ..|+.+ -+........+|+.+-.+
T Consensus 293 pDi~t--~sK~lg~G~piG~v~~~~~--i~~~l~~~~~g~~~~-----------~~T~~~-npla~aAa~aaL~~l~~~- 355 (465)
T 2yky_A 293 ADLTT--LGKYIGGGMSFGAFGGRRD--LMERFDPARDGAFAH-----------AGTFNN-NILTMSAGHAALTQIYTR- 355 (465)
Confidence 45554 5699998777888887765 2222211 00010 011111 111111222334444333
Q ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcEEeC--CCceeEEEEEecCCcchh-------hhhhHHHHHHHHHhCCcEEEeec
Q psy852 659 LQKYIRRHCELAKLFEGKVRRD-PRFEISN--DVRLGLVCFRLRSENNLI-------ADQNNRKLLEDINASGRLHMVPA 728 (891)
Q Consensus 659 ~~~~i~~~~~lA~~L~~~L~~~-~~~eil~--~~~~~iV~Fr~~~~~~~~-------~d~ln~~L~~~L~~~G~~~~s~s 728 (891)
...++..++.++|.++|++. ..+.+.. +..-.++.|.+.+....+ -......+.+.|.++|+++...
T Consensus 356 --~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~- 432 (465)
T 2yky_A 356 --QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPR- 432 (465)
Confidence 35566777888888888764 1222221 223456777664310000 0123557888888899874322
Q ss_pred cccCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy852 729 SQEQNDEVFELQERKRKDDLAYKRSFFVRMLGL 761 (891)
Q Consensus 729 ~~~g~~~l~sv~~~tT~edId~li~~L~ei~~~ 761 (891)
... . ++...|++|||+++++|++.+..
T Consensus 433 ~~~---~---~s~~~t~edid~~l~~l~~~l~~ 459 (465)
T 2yky_A 433 GMY---A---LSLEIADAGRDAFAEALADFIGE 459 (465)
Confidence 111 1 33356999999999999987643
No 456
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=95.63 E-value=0.048 Score=59.68 Aligned_cols=260 Identities=10% Similarity=-0.005 Sum_probs=163.8
Q ss_pred HHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcC
Q psy852 448 LAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAF 527 (891)
Q Consensus 448 lAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~g 527 (891)
+.+.+++.+.. +. .++ .++|++++..++.+.. .+...|+++...|.+...++.+.+
T Consensus 93 l~~~la~~~~~-~~-~i~---~~sGt~a~~~~l~~~~-------------------~~gd~v~~~~~~~~~~~~~~~~~g 148 (399)
T 3tqx_A 93 LEKDISEFLGT-DD-TIL---YSSCFDANGGLFETLL-------------------GPEDAIISDELNHASIIDGIRLCK 148 (399)
T ss_dssp HHHHHHHHHTC-SE-EEE---ESCHHHHHHTTHHHHC-------------------CTTCEEEEETTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHCC-Cc-EEE---ECchHHHHHHHHHHhc-------------------CCCCEEEECCcccHHHHHHHHHcC
Confidence 33445555543 32 333 3456888887765421 123368899999999999999989
Q ss_pred ceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEE--e---cCCccc--------hhhh-----hc------------
Q psy852 528 VRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVS--T---TLGTTS--------CYRK-----SQ------------ 577 (891)
Q Consensus 528 v~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vv--a---taGTT~--------c~~~-----ld------------ 577 (891)
.+++.+|. +|+++|+++|++....+..+.+|+ . ..|++. |.++ +|
T Consensus 149 ~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~ 223 (399)
T 3tqx_A 149 AQRYRYKN-----NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENG 223 (399)
T ss_dssp SEEEEECT-----TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTS
T ss_pred CceeEeCC-----CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCC
Confidence 99998886 578899999987544322222222 2 344443 4331 11
Q ss_pred -------C-CCCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHH
Q psy852 578 -------G-IEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWF 649 (891)
Q Consensus 578 -------G-i~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~ 649 (891)
+ ....|.+..++||++++|.| |+++.+++ .+.........|.... +. -......+..
T Consensus 224 ~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~-~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~~ 288 (399)
T 3tqx_A 224 RGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHKE-IIEWLRNRSRPYLFSN----------TV---APVIVATSLK 288 (399)
T ss_dssp CCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECHH-HHHHHHHHCHHHHSSC----------CC---CHHHHHHHHH
T ss_pred CchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCHH-HHHHHHHhCcceeccC----------CC---cHHHHHHHHH
Confidence 1 13568999999999996655 77666543 2222111111221100 00 0111223334
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeecc
Q psy852 650 VIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPAS 729 (891)
Q Consensus 650 ~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~ 729 (891)
+++.+. +++.+..++..++++++.+.|++. ++++. ++..++++|.+.+ .....++.+.|.++|+.+.....
T Consensus 289 ~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~------~~~~~~~~~~l~~~gi~v~~~~~ 359 (399)
T 3tqx_A 289 VLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLGD------AQLATNMADHLLQEGIYVVGFSY 359 (399)
T ss_dssp HHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEEC------HHHHHHHHHHHHHTTEECCEECT
T ss_pred HHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC------HHHHHHHHHHHHHCCCEEeeeCC
Confidence 444333 567888889999999999999886 66665 5667788888753 23567888999999987442211
Q ss_pred ---ccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 730 ---QEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 730 ---~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
..+...+ ++++..+|++|++++++.|++++.
T Consensus 360 ~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 394 (399)
T 3tqx_A 360 PVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGK 394 (399)
T ss_dssp TTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 2344577 999989999999999999998764
No 457
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=95.49 E-value=0.099 Score=58.51 Aligned_cols=258 Identities=10% Similarity=0.045 Sum_probs=161.7
Q ss_pred HHHHHHHHhhccCCccccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc
Q psy852 447 ELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA 526 (891)
Q Consensus 447 elAr~l~~~L~~~~~~eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~ 526 (891)
++.+.+++.+.. +. .+ +.++|+++|..++.+. .+ +.-.|+++...|.++..++.+.
T Consensus 113 ~l~~~la~~~g~-~~--~i--~~~sGs~a~~~al~~l----~~---------------~gd~vl~~~~~h~~~~~~~~~~ 168 (427)
T 2w8t_A 113 EVEQALRDFYGT-TG--AI--VFSTGYMANLGIISTL----AG---------------KGEYVILDADSHASIYDGCQQG 168 (427)
T ss_dssp HHHHHHHHHHTC-SE--EE--EESCHHHHHHHHHHHH----SC---------------TTCEEEEETTCCHHHHHHHHHS
T ss_pred HHHHHHHHHhCC-Cc--eE--EecCcHHHHHHHHHHh----cC---------------CCCEEEECCcccHHHHHHHHHc
Confidence 344555555533 32 23 3557788888776552 11 1235888999999999999988
Q ss_pred CceEEEecCCCCCCcCHHHHHHHHHhhhhcCCccEEEEe----cCCccc--------hhhh--------------h----
Q psy852 527 FVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVST----TLGTTS--------CYRK--------------S---- 576 (891)
Q Consensus 527 gv~v~~Vp~d~~G~mD~~~Le~aI~~d~~~g~ip~~Vva----taGTT~--------c~~~--------------l---- 576 (891)
+.+++.+|. +|+++|+++|++... +.+.++++. ..|... |.++ +
T Consensus 169 g~~~~~~~~-----~d~~~le~~l~~~~~-~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g 242 (427)
T 2w8t_A 169 NAEIVRFRH-----NSVEDLDKRLGRLPK-EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNG 242 (427)
T ss_dssp CSEEEEECT-----TCHHHHHHHHHTSCS-SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTS
T ss_pred CCeeEEeCC-----CCHHHHHHHHHhccC-CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCC
Confidence 988888874 699999999986321 122222222 234433 4331 1
Q ss_pred ------cCC-CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccC-CCccccCCCCCccccCCcccccccccchHHH
Q psy852 577 ------QGI-EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD-PLYLQHGHEGAIDYRHWGIPLSRRFRSLKLW 648 (891)
Q Consensus 577 ------dGi-~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~-~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW 648 (891)
-++ +.+|.+..++||+++. .| |+++.++. .+ +.+... ..|... .+. -......+.
T Consensus 243 ~~~~~~~~~~~~~di~~~s~sK~~g~-~g-G~v~~~~~-l~-~~l~~~~~~~~~~----------~~~---~~~~~aa~~ 305 (427)
T 2w8t_A 243 RGVYEAQGLEGQIDFVVGTFSKSVGT-VG-GFVVSNHP-KF-EAVRLACRPYIFT----------ASL---PPSVVATAT 305 (427)
T ss_dssp CCHHHHTTCTTCCSEEEEESSSTTCS-CC-EEEEECCT-TG-GGGGGTCHHHHSS----------CCC---CHHHHHHHH
T ss_pred CchHhhcCCCcCCcEEEecchhhhcc-CC-CEEEeCHH-HH-HHHHHhccccccc----------CCC---CHHHHHHHH
Confidence 111 3579999999999984 34 77777543 22 222211 111110 000 012222233
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCcEEeCCC-ceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEee
Q psy852 649 FVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDV-RLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVP 727 (891)
Q Consensus 649 ~~L~~lG~~G~~~~i~~~~~lA~~L~~~L~~~~~~eil~~~-~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~ 727 (891)
.+++.+. .+.+..++..+++++|.+.|++. ++++..++ ..++++|.+.+ .....++.+.|.++|+++..+
T Consensus 306 ~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~L~~~Gi~v~~~ 376 (427)
T 2w8t_A 306 TSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED------QEQAAMMWQALLDGGLYVNMA 376 (427)
T ss_dssp HHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS------HHHHHHHHHHHHHTTEECEEE
T ss_pred HHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC------HHHHHHHHHHHHHCCeEEeee
Confidence 4444432 24677888899999999999887 78887455 67888898853 234668889999999875433
Q ss_pred cc---ccCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 728 AS---QEQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 728 s~---~~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.. ..+...+ ++++..+|++||+++++.|+++..
T Consensus 377 ~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~ 413 (427)
T 2w8t_A 377 RPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGR 413 (427)
T ss_dssp CTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 21 1234567 999988999999999999998763
No 458
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=95.44 E-value=0.017 Score=67.78 Aligned_cols=89 Identities=8% Similarity=0.013 Sum_probs=67.1
Q ss_pred EEEecCCCChHHHHHHHHc--CCeEEEEecCCCC--cccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC---HHH
Q psy852 144 MAYCSKEAHSCVEKAAMMA--FVRLKILEPDDKN--SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN---LAE 216 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~--~~~v~~V~~d~~g--~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp---l~~ 216 (891)
.|++..-+|+....++.+. +.+++.|++++++ .+|+++|++.+... +-+|+++..+|.||.+-+ +++
T Consensus 196 ~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~~~~l~~ 269 (546)
T 2zy4_A 196 KVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPA------IKIFFCVNPSNPPSVKMDQRSLER 269 (546)
T ss_dssp EEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTT------EEEEEEESSCSSSCBCCCHHHHHH
T ss_pred EEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCC------CeEEEEECCCCCCCccCCHHHHHH
Confidence 4677777888888776543 5788999987654 69999998765332 346666678999999976 556
Q ss_pred HHHHH--HHcCCceeeeccccCCc
Q psy852 217 IGPVA--KEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 217 I~~i~--~~~~~~lHvDaA~GG~~ 238 (891)
|+++| +++|++|.+|.+|+.+.
T Consensus 270 l~~~a~~~~~~~~ii~De~y~~~~ 293 (546)
T 2zy4_A 270 VRNIVAEHRPDLMILTDDVYGTFA 293 (546)
T ss_dssp HHHHHHHTCTTCEEEEECTTGGGS
T ss_pred HHHHHHhccCCcEEEEeCcchhhc
Confidence 77888 78899999999997543
No 459
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=95.35 E-value=0.14 Score=56.86 Aligned_cols=72 Identities=13% Similarity=-0.041 Sum_probs=49.1
Q ss_pred EEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHH
Q psy852 144 MAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKE 223 (891)
Q Consensus 144 ~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~ 223 (891)
.|+++.-+|.+....+...|.+++.+++|.++-- . ..+-+|+++..+|.||.+-+ +|++ ++
T Consensus 121 ~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~----------~-----~~~k~v~l~~p~NPtG~~~~--~l~~--~~ 181 (391)
T 3bwn_A 121 SVVAAAPFYSTYVEETTYVRSGMYKWEGDAWGFD----------K-----KGPYIELVTSPNNPDGTIRE--TVVN--RP 181 (391)
T ss_dssp EEEECSSCCTHHHHHHHTTCBTTEEEEEESTTCC----------C-----CSCEEEEEESSCTTTCCCCC--CCC-----
T ss_pred eEEEcCCCchhHHHHHHHcCCeEEEecCCHHHcC----------C-----CCCEEEEECCCCCCCchhHH--HHHH--Hh
Confidence 4888888999998888877778888888765321 0 12446667888999999986 4544 22
Q ss_pred cC--Cceeeeccc
Q psy852 224 FD--VWLHVDGAY 234 (891)
Q Consensus 224 ~~--~~lHvDaA~ 234 (891)
++ ++|++|.+|
T Consensus 182 ~~~~~~ii~De~y 194 (391)
T 3bwn_A 182 DDDEAKVIHDFAY 194 (391)
T ss_dssp --CCCEEEEECTT
T ss_pred hcCCCEEEEeCCC
Confidence 44 777777777
No 460
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=94.10 E-value=0.23 Score=56.20 Aligned_cols=249 Identities=9% Similarity=0.040 Sum_probs=154.6
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecCCCCCCcC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLR 542 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~d~~G~mD 542 (891)
+|+ +++|+++++..++.+... +.-.|++..-+|.+...++...|.+++.+|.|++| +|
T Consensus 142 ~v~--~t~G~~~al~~~~~~l~~-------------------~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d 199 (448)
T 3aow_A 142 DIM--ITSGSQQALDLIGRVFLN-------------------PGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MK 199 (448)
T ss_dssp EEE--EESSHHHHHHHHHHHHCC-------------------TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-EC
T ss_pred hEE--EeCcHHHHHHHHHHHHcC-------------------CCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CC
Confidence 566 789999999888766411 11247777888889888888889999999998876 99
Q ss_pred HHHHHHHHHhhhhcC-CccE-EEEec----CCccc-----------hhhh-----hc---------C--------CC--C
Q psy852 543 GATLRQVMQQDETMG-YIPF-FVSTT----LGTTS-----------CYRK-----SQ---------G--------IE--Y 581 (891)
Q Consensus 543 ~~~Le~aI~~d~~~g-~ip~-~Vvat----aGTT~-----------c~~~-----ld---------G--------i~--~ 581 (891)
+++|+++|+.+...+ .+-+ +++.+ .|++. |.++ .| | ++ .
T Consensus 200 ~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~ 279 (448)
T 3aow_A 200 VEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEG 279 (448)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTS
T ss_pred HHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCC
Confidence 999999997321111 2222 23322 45543 3331 11 1 11 1
Q ss_pred ccEEEEcCcccCCcc-cccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHH----
Q psy852 582 ADSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGL---- 656 (891)
Q Consensus 582 aDSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~---- 656 (891)
.+-...+.+|+++ | ..+|+++.+++ +.+.+.....+ ..++ ...+.++++...+..
T Consensus 280 ~vi~~~S~SK~~~-~GlriG~v~~~~~--l~~~l~~~~~~-----------~~~~------~~~~~q~a~~~~L~~~~~~ 339 (448)
T 3aow_A 280 RVIYLGTFSKILA-PGFRIGWMVGDPG--IIRKMEIAKQS-----------TDLC------TNVFGQVVAWRYVDGGYLE 339 (448)
T ss_dssp CEEEEEESTTTTC-GGGCCEEEEECHH--HHHHHHHHHHH-----------HHSS------CCHHHHHHHHHHHHTTHHH
T ss_pred CEEEEccchhhcc-ccccEEEEEeCHH--HHHHHHHHHHH-----------hcCC------CCHHHHHHHHHHHHhCCHH
Confidence 2346667899998 5 34899988643 22222110000 0000 012333444444432
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcc-CC-CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccc----
Q psy852 657 SGLQKYIRRHCELAKLFEGKVRR-DP-RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQ---- 730 (891)
Q Consensus 657 ~G~~~~i~~~~~lA~~L~~~L~~-~~-~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~---- 730 (891)
+.+.+..+...++++++.+.|++ .| ++++..+.....++++++.. ....++.++|.++|+++..+...
T Consensus 340 ~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~------~~~~~l~~~l~~~gV~v~pg~~f~~~~ 413 (448)
T 3aow_A 340 KHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDG------IDSKKMLERAIKKGVAYVPGEAFYAHR 413 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTT------CCHHHHHHHHHHTTEECEEGGGGSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCC------CCHHHHHHHHHHCCcEEEcchhhcCCC
Confidence 23445555566788999999986 56 68876555556778887531 13567888898889886655433
Q ss_pred cCCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 731 EQNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 731 ~g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
.+...+ ++++.. ++++|+++++.|.+++.
T Consensus 414 ~~~~~iRls~~~~-~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 414 DVKNTMRLNFTYV-DEDKIMEGIKRLAETIK 443 (448)
T ss_dssp CCCSEEEEECSSS-CTHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCC-CHHHHHHHHHHHHHHHH
Confidence 234566 888764 89999999999988763
No 461
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=93.94 E-value=1.5 Score=51.16 Aligned_cols=276 Identities=7% Similarity=-0.017 Sum_probs=136.5
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHc--CceEEEecCCCC--
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMA--FVRLKILEPDDK-- 538 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~--gv~v~~Vp~d~~-- 538 (891)
+|+ ++.|+++++..++.+...+. +..+...|++..-.++....++.+. +.+++.+|++++
T Consensus 167 ~I~--~t~G~~eal~~~~~~l~~~~--------------l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~ 230 (546)
T 2zy4_A 167 NLF--AVEGGTAAMAYIFESLKLNG--------------LLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLN 230 (546)
T ss_dssp EEE--EEEHHHHHHHHHHHHHHHTT--------------SSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGT
T ss_pred eEE--EECCHHHHHHHHHHHhhhhh--------------cCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccC
Confidence 566 67899999887776532110 0112234677777787777776653 578899998654
Q ss_pred CCcCHHHHHHHHHhhhhcCCccEEEEe---cCCccc-----------h--hhh-----hcC---------C------CCc
Q psy852 539 NSLRGATLRQVMQQDETMGYIPFFVST---TLGTTS-----------C--YRK-----SQG---------I------EYA 582 (891)
Q Consensus 539 G~mD~~~Le~aI~~d~~~g~ip~~Vva---taGTT~-----------c--~~~-----ldG---------i------~~a 582 (891)
+.+|+++|+++++.. ...+++++ -.|++. | .++ .|. . ...
T Consensus 231 ~~~d~~~l~~~~~~~----~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~ 306 (546)
T 2zy4_A 231 WQYPDSELDKLKDPA----IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPEN 306 (546)
T ss_dssp TBCCHHHHGGGGSTT----EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGG
T ss_pred CCCCHHHHHHhhCCC----CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCC
Confidence 469999998876432 12333332 245543 4 221 111 0 123
Q ss_pred cEEEEcCcccCCcc-cccEEEEEeCCccchhhhccC---------CCccccCCCCCccc----------cCCcccccccc
Q psy852 583 DSFNVNVNKWLLTA-FDSSCLWVADRYKLTSALVVD---------PLYLQHGHEGAIDY----------RHWGIPLSRRF 642 (891)
Q Consensus 583 DSIs~d~HK~L~~P-~g~G~llvR~~~~L~~~l~~~---------~~Yl~~~~e~~~~~----------~~~ti~~SRr~ 642 (891)
+-+..+.+|+++.| .-+|+++..+.+.+....... ..|..-.. ..+.. .......+-..
T Consensus 307 ~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 385 (546)
T 2zy4_A 307 TLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLP-DVRSLKFIDRLVADSRAVALNHTAGL 385 (546)
T ss_dssp EEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCS-CGGGCCHHHHHHHHTTTTTTGGGCSS
T ss_pred EEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccc-cccchhhhhhhhhhhHHHHhhccCCC
Confidence 45677899999766 448999887753332211100 01100000 00000 00000000001
Q ss_pred cchHHHH----HH-HHH-HHhhHHH-HHHHHHHHHHHHHHHhccCCCcEEeCCCcee-EEEEEecCC-----cchhh---
Q psy852 643 RSLKLWF----VI-RTY-GLSGLQK-YIRRHCELAKLFEGKVRRDPRFEISNDVRLG-LVCFRLRSE-----NNLIA--- 706 (891)
Q Consensus 643 ~aL~lW~----~L-~~l-G~~G~~~-~i~~~~~lA~~L~~~L~~~~~~eil~~~~~~-iV~Fr~~~~-----~~~~~--- 706 (891)
..+.+.. ++ ..+ ..+.+.+ ..+...+..+.+.+.|. . .+.+ .+++.+ .+.+++... +....
T Consensus 386 s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~wl 462 (546)
T 2zy4_A 386 STPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-M-PPLR-DENAVDYYTLIDLQDVTAKLYGEAFSEWA 462 (546)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-S-SCCC-CTTBCCSEEEEEHHHHHHHHHCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-C-Cccc-CCCCeeEEEEEEHHHhhcccccHHHHHHh
Confidence 1111111 11 111 1133333 33334445666777774 2 2322 234444 456665321 00000
Q ss_pred --h-hhHHHHHHHHHhCCcEEEeecccc-CCeEE-EEecCCCCHHHHHHHHHHHHHHHHHHH
Q psy852 707 --D-QNNRKLLEDINASGRLHMVPASQE-QNDEV-FELQERKRKDDLAYKRSFFVRMLGLVC 763 (891)
Q Consensus 707 --d-~ln~~L~~~L~~~G~~~~s~s~~~-g~~~l-~sv~~~tT~edId~li~~L~ei~~~~~ 763 (891)
+ .....+.+.+.+.|+.+.-+.... +...+ +++. ..++++++++++.|+++...+.
T Consensus 463 ~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 463 VKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp HHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHH
Confidence 0 012346677778898865544332 23456 8886 3478999999999998875443
No 462
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=93.09 E-value=14 Score=42.07 Aligned_cols=75 Identities=11% Similarity=-0.054 Sum_probs=46.2
Q ss_pred eEEEEecCC------CCcccHHHHHHHHHhhhh--cCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeec
Q psy852 165 RLKILEPDD------KNSLRGATLRQVMQQDET--MGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDG 232 (891)
Q Consensus 165 ~v~~V~~d~------~g~id~~~L~~~l~~~~~--~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDa 232 (891)
.+..+|... ...-+.+.+++.++...+ .+..+..|++=-.-.+.|.+-| +++|.++|++||+.+.+|=
T Consensus 188 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DE 267 (456)
T 4atq_A 188 EVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADE 267 (456)
T ss_dssp SEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEEC
T ss_pred cceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecc
Confidence 566676431 122345555555543211 2233455554434445577755 8999999999999999999
Q ss_pred cccCCcc
Q psy852 233 AYAGSSF 239 (891)
Q Consensus 233 A~GG~~~ 239 (891)
.+-|+..
T Consensus 268 V~tG~GR 274 (456)
T 4atq_A 268 VQSGFCR 274 (456)
T ss_dssp TTTTTTT
T ss_pred cccccCC
Confidence 9977653
No 463
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=91.26 E-value=0.028 Score=64.58 Aligned_cols=55 Identities=9% Similarity=-0.038 Sum_probs=41.8
Q ss_pred cHHHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeecccc
Q psy852 178 RGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYA 235 (891)
Q Consensus 178 d~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~G 235 (891)
|+++|++.+++. +..+.+|++.-..+.+|.+-| +++|.++|+++|+++.+|-++.
T Consensus 219 d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~ 277 (465)
T 2yky_A 219 DVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT 277 (465)
Confidence 789999988742 112345555444445897777 9999999999999999999996
No 464
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=89.36 E-value=0.98 Score=50.99 Aligned_cols=91 Identities=13% Similarity=0.044 Sum_probs=61.9
Q ss_pred EEecCCCChHHHHHHHHcCCe-EEEEec--CCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccc---cCHHHHH
Q psy852 145 AYCSKEAHSCVEKAAMMAFVR-LKILEP--DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSF---DNLAEIG 218 (891)
Q Consensus 145 v~~S~~~H~Sv~kaa~~~~~~-v~~V~~--d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~Gav---Dpl~~I~ 218 (891)
|++++-+-.+-.......|.+ +...+. ++...+|.+.+.+.+.... ....++..+..+|.||.+ +.+++|+
T Consensus 140 V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~---~~~~vll~~~p~NPtG~~~~~~~~~~i~ 216 (420)
T 4h51_A 140 IYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAP---DGSVFILHQCAHNPTGVDPSQEQWNEIA 216 (420)
T ss_dssp EEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSC---SSCEEEEESSSCTTTCCCCCHHHHHHHH
T ss_pred EEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccC---CCcEEEEeCCCCCCCCCCCCHHHHHHHH
Confidence 555543322222233444544 433332 3457789999998887643 224677778889999998 5567888
Q ss_pred HHHHHcCCceeeeccccCCc
Q psy852 219 PVAKEFDVWLHVDGAYAGSS 238 (891)
Q Consensus 219 ~i~~~~~~~lHvDaA~GG~~ 238 (891)
++|+++++++..|-+|.|+.
T Consensus 217 ~~~~~~~~~~~~D~~Y~~~~ 236 (420)
T 4h51_A 217 SLMLAKHHQVFFDSAYQGYA 236 (420)
T ss_dssp HHHHHHTCEEEEEESCTTTT
T ss_pred HHHHhcCceEeeehhhhhhc
Confidence 99999999999999997754
No 465
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=88.37 E-value=1.4 Score=49.31 Aligned_cols=59 Identities=5% Similarity=-0.102 Sum_probs=43.9
Q ss_pred eEEEecCCCChHHHHHHHHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC
Q psy852 143 LMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN 213 (891)
Q Consensus 143 ~~v~~S~~~H~Sv~kaa~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp 213 (891)
..|+++.-.|.+....+...+.+++. ..+|+++|++.+++. +.+|+++..+|.||.+-+
T Consensus 156 d~Vlv~~P~y~~~~~~~~~~g~~~~~------~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~ 214 (427)
T 2hox_A 156 SKVVAHAPFYPVFREQTKYFDKKGYV------WAGNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH 214 (427)
T ss_dssp EEEEECSSCCHHHHHHHHHSCBTTEE------EEEEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC
T ss_pred CEEEEeCCCcccHHHHHHHcCCeeee------ecCCHHHHHHhhcCC------ceEEEEcCCCCCcccccH
Confidence 35888888999988888766655542 457888888776543 346677788999999988
No 466
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=87.99 E-value=8.6 Score=43.98 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=38.0
Q ss_pred HHHHHHHHhhhhcCCcceEEEeecccCccccccC----HHHHHHHHHHcCCceeeeccccCCcc
Q psy852 180 ATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSSF 239 (891)
Q Consensus 180 ~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~~ 239 (891)
++|++.+.+.. ...+..|++=-.-.+-|.+-| +++|.++|++||+.+.+|=.+-|+..
T Consensus 223 ~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGR 284 (473)
T 4e3q_A 223 RELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGR 284 (473)
T ss_dssp HHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSST
T ss_pred HHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCc
Confidence 44555554321 122444554444445566654 88999999999999999999977653
No 467
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=86.14 E-value=10 Score=46.49 Aligned_cols=81 Identities=11% Similarity=0.064 Sum_probs=48.3
Q ss_pred HHHHhccCCCcEEeCCCceeEEEEEecCCc-c-hhhhhhHHHHHHHHHhCCcEEEeeccccCCeEE-EEecCCCCHHHHH
Q psy852 673 FEGKVRRDPRFEISNDVRLGLVCFRLRSEN-N-LIADQNNRKLLEDINASGRLHMVPASQEQNDEV-FELQERKRKDDLA 749 (891)
Q Consensus 673 L~~~L~~~~~~eil~~~~~~iV~Fr~~~~~-~-~~~d~ln~~L~~~L~~~G~~~~s~s~~~g~~~l-~sv~~~tT~edId 749 (891)
+.+.+++.+.+.-+.. .-.++.+.+.... . ..-+.....+.+.|.++|++.. +. + ..+ +++...+|++|||
T Consensus 742 l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~-p~---g-~~lrl~pp~~~t~e~id 815 (831)
T 4a0g_A 742 LVQQISSHSAVQRVVV-IGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTR-PL---G-NVIYLMCGPCTSPEICR 815 (831)
T ss_dssp HHHHHHHSTTEEEEEE-ETTEEEEEEC---------CHHHHHHHHHHHHTTEECC-CB---T-TEEEEECCTTCCHHHHH
T ss_pred HHHHHhhCCCceeEee-cccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEE-ec---C-CEEEEECCCCCCHHHHH
Confidence 4455555555433321 1234555553220 0 0012345678889999998732 21 2 456 8888888999999
Q ss_pred HHHHHHHHHH
Q psy852 750 YKRSFFVRML 759 (891)
Q Consensus 750 ~li~~L~ei~ 759 (891)
++++.|++.+
T Consensus 816 ~~~~~l~~~l 825 (831)
T 4a0g_A 816 RLLTKLYKRL 825 (831)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998876
No 468
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=82.75 E-value=0.49 Score=52.72 Aligned_cols=264 Identities=8% Similarity=0.017 Sum_probs=136.5
Q ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccc-eEEEecccchHHHHHHH----H--HcCceEEEecC
Q psy852 463 EISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSK-LMAYCSKEAHSCVEKAA----M--MAFVRLKILEP 535 (891)
Q Consensus 463 eVv~~itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~-~vI~~S~~aH~Sv~Kaa----~--l~gv~v~~Vp~ 535 (891)
+|+ +|+|+++++..++.+... .........+.+ .... -+|++..-+|.....++ . -.+..++.+|+
T Consensus 108 ~i~--~t~G~t~al~~~~~~l~~----~gd~~~~~~~~~-~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (444)
T 3if2_A 108 NIA--LTNGSQNAFFYLFNLFGG----AFVNEHSQDKES-KSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTH 180 (444)
T ss_dssp GEE--EESSHHHHHHHHHHHSSE----EEECC--------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEE
T ss_pred HEE--EecCcHHHHHHHHHHHhC----CCcccccccccc-ccccceEEEeCCCCccchhhcccccchhhccCceEEeccc
Confidence 566 789999999988766421 000000000000 0001 23443244444443322 1 23567888888
Q ss_pred CC-CC----CcCHHHHHHHHHhhhhcCCccEEEE---ecCCccc-----------hhhh-----hcCC------------
Q psy852 536 DD-KN----SLRGATLRQVMQQDETMGYIPFFVS---TTLGTTS-----------CYRK-----SQGI------------ 579 (891)
Q Consensus 536 d~-~G----~mD~~~Le~aI~~d~~~g~ip~~Vv---ataGTT~-----------c~~~-----ldGi------------ 579 (891)
|+ +| .+|+++|+++++.... +...++++ +..|++. |.++ +|.+
T Consensus 181 ~~~~g~~~~~~d~~~l~~~l~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 259 (444)
T 3if2_A 181 DGEEGFFKYRVDFEALENLPALKEG-RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSD 259 (444)
T ss_dssp TTEEEEEEEECCHHHHHTCHHHHTT-CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC
T ss_pred ccccCccccCCCHHHHHHHHHhcCC-CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccc
Confidence 76 44 7999999998643211 11122332 2356554 3331 1211
Q ss_pred -----CCccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHH
Q psy852 580 -----EYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTY 654 (891)
Q Consensus 580 -----~~aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~l 654 (891)
...+-...++||+++....+|+++...+ +.+.+.....+ .+. ....+.++++...+
T Consensus 260 ~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~--l~~~~~~~~~~-------------~~~----~~~~~~~~a~~~~l 320 (444)
T 3if2_A 260 AHLNWDNNTILCFSLSKIGLPGMRTGIIVADAK--VIEAVSAMNAV-------------VNL----APTRFGAAIATPLV 320 (444)
T ss_dssp CCCCCCTTEEEEEESTTTTCGGGCCEEEECCHH--HHHHHHHHHHH-------------HHS----SCCCHHHHHHHHHH
T ss_pred ccccCCCCEEEEechhhccCCCCceEEEEECHH--HHHHHHHHHHh-------------ccC----CCChHHHHHHHHHH
Confidence 2345678899998655577887765432 22222110000 000 01123333333333
Q ss_pred HHhhHHH-----HHHHHHHHHHHHHHHhcc-CC--CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEe
Q psy852 655 GLSGLQK-----YIRRHCELAKLFEGKVRR-DP--RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMV 726 (891)
Q Consensus 655 G~~G~~~-----~i~~~~~lA~~L~~~L~~-~~--~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s 726 (891)
....+.+ ..++..++.+++.+.|++ ++ ++++..+.....+++++... ....+.+.+.|.+.|+.+..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~l~~~l~~~gi~v~~ 395 (444)
T 3if2_A 321 ANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDL-----PISTLDLYERLKAKGTLIVP 395 (444)
T ss_dssp HTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTC-----SSCHHHHHHHHHHTTEECEE
T ss_pred HcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCC-----CCCHHHHHHHHHHCCeEEec
Confidence 3222222 222334455566666654 34 35565555556777777532 12356788889889988665
Q ss_pred ecccc----------CCeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 727 PASQE----------QNDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 727 ~s~~~----------g~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
+..+. ....+ ++++. ++++|+++++.|++++.
T Consensus 396 g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~ 438 (444)
T 3if2_A 396 SEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVR 438 (444)
T ss_dssp GGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHH
Confidence 54431 12456 88876 99999999999998774
No 469
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=50.97 E-value=36 Score=29.13 Aligned_cols=70 Identities=17% Similarity=0.230 Sum_probs=43.2
Q ss_pred CCeEEEecCCCChHH-----HHHH---HHcCCeEEEEecCCCCcccHHHHHHHHHhhhh--cCCcceEEEeecccCcccc
Q psy852 141 SKLMAYCSKEAHSCV-----EKAA---MMAFVRLKILEPDDKNSLRGATLRQVMQQDET--MGYIPFFVSTTLGTTSCCS 210 (891)
Q Consensus 141 ~~~~v~~S~~~H~Sv-----~kaa---~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~--~g~~p~~V~~t~Gtt~~Ga 210 (891)
.++++|++..+++|- .++- .-.++.+..++++.+ .++++.+.+... ....|.+++ +....|.
T Consensus 2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~-----~~~~~~l~~~~g~~~~~vP~ifi---~g~~igG 73 (93)
T 1t1v_A 2 SGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQD-----NALRDEMRTLAGNPKATPPQIVN---GNHYCGD 73 (93)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC-----HHHHHHHHHHTTCTTCCSCEEEE---TTEEEEE
T ss_pred CCEEEEEcCCCCCchhhHHHHHHHHHHHHCCCceEEEECCCC-----HHHHHHHHHHhCCCCCCCCEEEE---CCEEEeC
Confidence 357899999999993 2333 235677888888754 234444544432 124565543 4567788
Q ss_pred ccCHHHHH
Q psy852 211 FDNLAEIG 218 (891)
Q Consensus 211 vDpl~~I~ 218 (891)
.|++.++.
T Consensus 74 ~d~l~~l~ 81 (93)
T 1t1v_A 74 YELFVEAV 81 (93)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877654
No 470
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.35 E-value=71 Score=28.47 Aligned_cols=69 Identities=13% Similarity=0.185 Sum_probs=42.6
Q ss_pred CeEEEecCCCChHHH-----HHHH---HcCCeEEEEecCCCCcccHHHHHHHHHhhhh------cCC--cceEEEeeccc
Q psy852 142 KLMAYCSKEAHSCVE-----KAAM---MAFVRLKILEPDDKNSLRGATLRQVMQQDET------MGY--IPFFVSTTLGT 205 (891)
Q Consensus 142 ~~~v~~S~~~H~Sv~-----kaa~---~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~------~g~--~p~~V~~t~Gt 205 (891)
+++||++..+++|.. ++.. -.++.+..++++.+ . ++++.+.+... .|. .|.+++ +.
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~~----~-~~~~~l~~~~~~~~~~~~g~~tvP~vfi---~g 80 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEANKIEFEEVDITMS----E-EQRQWMYKNVPPEKKPTQGNPLPPQIFN---GD 80 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTTC----H-HHHHHHHHSCCTTTCCSSSSCCSCEEEE---TT
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHHcCCCEEEEECCCC----H-HHHHHHHHHhcccccccCCCCCCCEEEE---CC
Confidence 578999999999984 3432 35678888888763 2 34444444320 133 454432 34
Q ss_pred CccccccCHHHHH
Q psy852 206 TSCCSFDNLAEIG 218 (891)
Q Consensus 206 t~~GavDpl~~I~ 218 (891)
...|.+|++.++.
T Consensus 81 ~~iGG~d~l~~l~ 93 (111)
T 2ct6_A 81 RYCGDYDSFFESK 93 (111)
T ss_dssp EEEEEHHHHHHHH
T ss_pred EEEeCHHHHHHHH
Confidence 5778888776654
No 471
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=35.25 E-value=26 Score=37.68 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=42.5
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~ 73 (309)
T 3fkr_A 19 TFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEH 73 (309)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHH
Confidence 5588999999999999999888886667777777766666666666777766554
No 472
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=32.63 E-value=29 Score=37.00 Aligned_cols=55 Identities=13% Similarity=0.119 Sum_probs=38.8
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 72 (297)
T 3flu_A 18 PMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKH 72 (297)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHH
Confidence 4588999999999999999888775555655555555555555555666665554
No 473
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=32.03 E-value=29 Score=37.18 Aligned_cols=55 Identities=20% Similarity=0.088 Sum_probs=38.5
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...+.|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 26 Pf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~ 80 (304)
T 3l21_A 26 PFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEA 80 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHH
Confidence 5588999999999999999888775555555555555554555555666655554
No 474
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=31.98 E-value=32 Score=36.90 Aligned_cols=55 Identities=11% Similarity=0.080 Sum_probs=40.8
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...+.|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 25 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~ 79 (307)
T 3s5o_A 25 PFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQA 79 (307)
T ss_dssp CBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHT
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHH
Confidence 4588999999999999999888775556666666666555566666677766664
No 475
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=31.66 E-value=31 Score=36.70 Aligned_cols=55 Identities=7% Similarity=-0.100 Sum_probs=37.0
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...+.|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 14 PFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4578999999999999998888775455555555444444444455555555554
No 476
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=31.42 E-value=33 Score=36.68 Aligned_cols=55 Identities=15% Similarity=0.076 Sum_probs=37.4
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 27 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 81 (304)
T 3cpr_A 27 PFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREE 81 (304)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4578999999999999998887775555555555555444445555566655543
No 477
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=31.34 E-value=32 Score=36.51 Aligned_cols=55 Identities=20% Similarity=0.258 Sum_probs=38.3
Q ss_pred ecCCCCcccHHHHHHHHHhhhh-cCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDET-MGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~-~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...+ +|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 14 Pf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 69 (293)
T 1f6k_A 14 SFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDE 69 (293)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHH
Confidence 4578999999999999998887 775555665555555555555555666655543
No 478
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=31.32 E-value=36 Score=41.70 Aligned_cols=60 Identities=8% Similarity=-0.116 Sum_probs=36.4
Q ss_pred HHHHHHHHhhh--hcCCcceEEEeecc-cCccccccC----HHHHHHHHHHcCCceeeeccccCCcc
Q psy852 180 ATLRQVMQQDE--TMGYIPFFVSTTLG-TTSCCSFDN----LAEIGPVAKEFDVWLHVDGAYAGSSF 239 (891)
Q Consensus 180 ~~L~~~l~~~~--~~g~~p~~V~~t~G-tt~~GavDp----l~~I~~i~~~~~~~lHvDaA~GG~~~ 239 (891)
+.|++.|++.. ..+..+..|++=-. ..+.|.+-| +++|.++|++||+++++|=++.|+..
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGR 643 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWR 643 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTT
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCcccccc
Confidence 56666665321 11222333333222 345566655 99999999999999999988877653
No 479
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=31.13 E-value=27 Score=37.59 Aligned_cols=55 Identities=11% Similarity=-0.029 Sum_probs=39.7
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 35 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~ 89 (315)
T 3na8_A 35 PFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKT 89 (315)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4588999999999999999888876556666665555555555556666666554
No 480
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=30.72 E-value=29 Score=36.82 Aligned_cols=55 Identities=11% Similarity=0.062 Sum_probs=38.0
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 66 (291)
T 3tak_A 12 PMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRV 66 (291)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHH
Confidence 4588999999999999998887775555555555554444555555666655554
No 481
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=30.66 E-value=32 Score=36.99 Aligned_cols=55 Identities=9% Similarity=0.048 Sum_probs=39.3
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 19 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~ 73 (313)
T 3dz1_A 19 PFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKR 73 (313)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHH
Confidence 4588999999999999999888876555665665555555555555666665554
No 482
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=30.08 E-value=34 Score=36.60 Aligned_cols=55 Identities=20% Similarity=0.253 Sum_probs=36.3
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 22 PF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 76 (303)
T 2wkj_A 22 PFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEE 76 (303)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHH
Confidence 4578999999999999998887775455555444444444444445555555443
No 483
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=29.92 E-value=29 Score=37.44 Aligned_cols=55 Identities=15% Similarity=0.102 Sum_probs=38.2
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 33 Pf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~ 87 (315)
T 3si9_A 33 PFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQ 87 (315)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHH
Confidence 4588999999999999999888775555555555555444555555666655554
No 484
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=29.83 E-value=1.2e+02 Score=26.90 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=46.3
Q ss_pred CCeEEEecCCCChHHHHHH--HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHH
Q psy852 141 SKLMAYCSKEAHSCVEKAA--MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIG 218 (891)
Q Consensus 141 ~~~~v~~S~~~H~Sv~kaa--~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~ 218 (891)
.+.++|+...+.+|..--. .-.+.....+.+|... |..++++.+.+.......|.+++ +....|..|++.++.
T Consensus 17 ~~v~vy~~~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~--~~~~~~~~l~~~~g~~tvP~vfi---~g~~igG~d~l~~l~ 91 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTRVKELFSSLGVECNVLELDQVD--DGARVQEVLSEITNQKTVPNIFV---NKVHVGGCDQTFQAY 91 (114)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHTTCCCEEEETTTST--THHHHHHHHHHHHSCCSSCEEEE---TTEEEESHHHHHHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHcCCCcEEEEecCCC--ChHHHHHHHHHHhCCCccCEEEE---CCEEEeCHHHHHHHH
Confidence 4577899899999863322 2356677778777532 34556666654443445565544 556788888887665
No 485
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=29.74 E-value=30 Score=36.75 Aligned_cols=55 Identities=16% Similarity=0.257 Sum_probs=36.0
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 12 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 66 (292)
T 2ojp_A 12 PMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDL 66 (292)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHH
Confidence 4578999999999999998877775445555554444444444445555555443
No 486
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=29.67 E-value=31 Score=37.18 Aligned_cols=55 Identities=11% Similarity=0.074 Sum_probs=38.9
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 34 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~ 88 (314)
T 3qze_A 34 PFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQ 88 (314)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4588999999999999998887775555665665555555555555666655554
No 487
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=29.55 E-value=28 Score=36.93 Aligned_cols=50 Identities=18% Similarity=0.066 Sum_probs=33.6
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHH
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAK 222 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~ 222 (891)
|.+++|++|.+.|++.++...++|-.-+++ .|||-.+..-..+|=.++.+
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v---~GtTGE~~~Ls~eEr~~v~~ 59 (288)
T 2nuw_A 10 PFDKQGKVNVDALKTHAKNLLEKGIDAIFV---NGTTGLGPALSKDEKRQNLN 59 (288)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCCEEEE---TSTTTTGGGSCHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEE---CccccChhhCCHHHHHHHHH
Confidence 457899999999999999888777544444 45555555544444444443
No 488
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=29.50 E-value=35 Score=36.44 Aligned_cols=55 Identities=11% Similarity=0.019 Sum_probs=35.0
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...+.|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 23 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 77 (301)
T 1xky_A 23 PFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSV 77 (301)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4578999999999999998887775444444444443333334444555555443
No 489
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=29.11 E-value=33 Score=36.45 Aligned_cols=55 Identities=16% Similarity=0.072 Sum_probs=35.0
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 10 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 10 PFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4578999999999999998887775444444444443333334444555555443
No 490
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=28.71 E-value=1.1e+02 Score=33.77 Aligned_cols=67 Identities=10% Similarity=-0.035 Sum_probs=48.4
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhhhccCccccccccccceEEEecccchHHHHHHHHHcCceEEEecC-CC-CCCcCHHH
Q psy852 468 VRSSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP-DD-KNSLRGAT 545 (891)
Q Consensus 468 itsggsean~~al~aAR~~~~~~~~~~~~~~~~g~~~~~~vI~~S~~aH~Sv~Kaa~l~gv~v~~Vp~-d~-~G~mD~~~ 545 (891)
+|.|+++++..++.+.... .+ -.|++.+-.-.....++...|.+++.+|. ++ ++.+|+++
T Consensus 102 ~t~G~~~al~~~~~~l~~~-----------------~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 163 (405)
T 3k7y_A 102 QCIGGTGAIFVLLEFLKML-----------------NV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDL 163 (405)
T ss_dssp EEEHHHHHHHHHHHHHHTT-----------------TC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHH
T ss_pred EcCchHHHHHHHHHHHHhc-----------------CC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHH
Confidence 5788888877766543220 02 24666666666777777888999999998 44 58999999
Q ss_pred HHHHHHh
Q psy852 546 LRQVMQQ 552 (891)
Q Consensus 546 Le~aI~~ 552 (891)
|++++.+
T Consensus 164 l~~~l~~ 170 (405)
T 3k7y_A 164 FLNDLRN 170 (405)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999986
No 491
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=28.03 E-value=43 Score=36.18 Aligned_cols=153 Identities=9% Similarity=0.007 Sum_probs=86.7
Q ss_pred ccEEEEcCcccCCcccccEEEEEeCCccchhhhccCCCccccCCCCCccccCCcccccccccchHHHHHHHHHHHhhHHH
Q psy852 582 ADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQK 661 (891)
Q Consensus 582 aDSIs~d~HK~L~~P~g~G~llvR~~~~L~~~l~~~~~Yl~~~~e~~~~~~~~ti~~SRr~~aL~lW~~L~~lG~~G~~~ 661 (891)
.+-+..+++|+++....+|+++...+ +.+.+.....+ ++. ....+.++.....+....+.+
T Consensus 241 ~~i~~~s~sK~~~~G~r~G~~~~~~~--~~~~~~~~~~~-------------~~~----~~~~~~~~~~~~~l~~~~~~~ 301 (417)
T 3g7q_A 241 NIILCMSLSKLGLPGSRCGIIIANDK--TITAIANMNGI-------------ISL----APGGMGPAMMCEMIKRNDLLR 301 (417)
T ss_dssp TEEEEEESGGGTCTTSCCEEEECCHH--HHHHHHHHHHH-------------HCC----CCCSHHHHHHHHHHHTTCHHH
T ss_pred CEEEEEechhccCCCcceEEEEeCHH--HHHHHHHhhcc-------------eee----CCCcHHHHHHHHHHcCcchHH
Confidence 35567889997665567887766332 22222110000 000 011233333333333333332
Q ss_pred -----HHHHHHHHHHHHHHHhcc-CC--CcEEeCCCceeEEEEEecCCcchhhhhhHHHHHHHHHhCCcEEEeeccccC-
Q psy852 662 -----YIRRHCELAKLFEGKVRR-DP--RFEISNDVRLGLVCFRLRSENNLIADQNNRKLLEDINASGRLHMVPASQEQ- 732 (891)
Q Consensus 662 -----~i~~~~~lA~~L~~~L~~-~~--~~eil~~~~~~iV~Fr~~~~~~~~~d~ln~~L~~~L~~~G~~~~s~s~~~g- 732 (891)
+.++..++.+++.+.|++ .+ ++++..+.....++++++.. +.....+.+.|.+.|+.+..+..+..
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~l~~~l~~~gi~v~~g~~f~~~ 376 (417)
T 3g7q_A 302 LSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDL-----PITTELLYQRLKARGVLMVPGHYFFPG 376 (417)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTC-----SSCHHHHHHHHHHTTEECEEGGGGCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCC-----CCCHHHHHHHHHHCCEEEECchhhCCC
Confidence 223345566667777765 44 36766555556777777532 12456788889889988665443311
Q ss_pred --------CeEE-EEecCCCCHHHHHHHHHHHHHHHH
Q psy852 733 --------NDEV-FELQERKRKDDLAYKRSFFVRMLG 760 (891)
Q Consensus 733 --------~~~l-~sv~~~tT~edId~li~~L~ei~~ 760 (891)
...+ ++++. ++++|+++++.|++++.
T Consensus 377 ~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~ 411 (417)
T 3g7q_A 377 LDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEIE 411 (417)
T ss_dssp BSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHHH
T ss_pred CccccccCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 3466 88874 99999999999998874
No 492
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=27.93 E-value=40 Score=36.76 Aligned_cols=55 Identities=13% Similarity=0.028 Sum_probs=38.2
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 42 PF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~ 96 (343)
T 2v9d_A 42 IFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDH 96 (343)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHH
Confidence 5588999999999999998888776555655555555444445555566655543
No 493
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=27.61 E-value=33 Score=36.91 Aligned_cols=55 Identities=7% Similarity=0.042 Sum_probs=41.0
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...+.|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 18 Pf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~ 72 (311)
T 3h5d_A 18 PFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKV 72 (311)
T ss_dssp CBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4588999999999999999888886666766666665555556666666666554
No 494
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=27.07 E-value=1e+02 Score=24.80 Aligned_cols=66 Identities=17% Similarity=0.199 Sum_probs=36.2
Q ss_pred CeEEEecCCCChHHHHHH--HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHH
Q psy852 142 KLMAYCSKEAHSCVEKAA--MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLA 215 (891)
Q Consensus 142 ~~~v~~S~~~H~Sv~kaa--~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~ 215 (891)
++++|.+..+++|-.--. ...+..+..++++.+- .+.+.+.+....+..|.++. +....|..++|.
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~i~~~~~~i~~~~-----~~~~~~~~~~~~~~vP~l~~---~g~~i~g~~~i~ 69 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNA-----AKREEMIKRSGRTTVPQIFI---DAQHIGGYDDLY 69 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTCCCEEEECTTCS-----HHHHHHHHHHSSCCSCEEEE---TTEEEESHHHHH
T ss_pred cEEEEECCCChhHHHHHHHHHHCCCCcEEEECCCCH-----HHHHHHHHHhCCCCcCEEEE---CCEEEeCHHHHH
Confidence 467888888888864322 2346677888887531 22233333333456777643 334444444433
No 495
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=26.71 E-value=37 Score=36.85 Aligned_cols=55 Identities=5% Similarity=-0.013 Sum_probs=35.9
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 45 PF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~ 99 (332)
T 2r8w_A 45 PADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATI 99 (332)
T ss_dssp CBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 4578999999999999998877775444554444444444444444555555443
No 496
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=26.69 E-value=42 Score=37.01 Aligned_cols=55 Identities=11% Similarity=-0.011 Sum_probs=37.8
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 70 PF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~ 124 (360)
T 4dpp_A 70 PYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNC 124 (360)
T ss_dssp CBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHH
Confidence 4588999999999999998888775555555555554444455555556555443
No 497
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=25.42 E-value=2.4e+02 Score=24.55 Aligned_cols=70 Identities=10% Similarity=0.076 Sum_probs=42.6
Q ss_pred CCeEEEec-----CCCChHHHHHH--HHcCCeEEEEecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccC
Q psy852 141 SKLMAYCS-----KEAHSCVEKAA--MMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDN 213 (891)
Q Consensus 141 ~~~~v~~S-----~~~H~Sv~kaa--~~~~~~v~~V~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDp 213 (891)
.++++|+. ..+++|..--. .-.+..+..++++.+ ..+++.+.+.......|.++ .+....|.+|+
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~-----~~~~~~l~~~~g~~~vP~if---i~g~~igG~d~ 86 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILED-----EEVRQGLKTFSNWPTYPQLY---VRGDLVGGLDI 86 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSC-----HHHHHHHHHHHSCCSSCEEE---CSSSEEECHHH
T ss_pred CCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCCC-----HHHHHHHHHHhCCCCCCEEE---ECCEEEcCHHH
Confidence 45778888 88999884332 335778888888764 23444444433233446433 34556787877
Q ss_pred HHHHH
Q psy852 214 LAEIG 218 (891)
Q Consensus 214 l~~I~ 218 (891)
+.++.
T Consensus 87 l~~l~ 91 (109)
T 1wik_A 87 VKELK 91 (109)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 498
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=25.18 E-value=30 Score=36.99 Aligned_cols=55 Identities=9% Similarity=0.027 Sum_probs=38.1
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 15 Pf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 69 (300)
T 3eb2_A 15 PVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEA 69 (300)
T ss_dssp CBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHH
Confidence 4588999999999999999888775555555555554444455555566655554
No 499
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=25.16 E-value=35 Score=36.82 Aligned_cols=55 Identities=13% Similarity=0.024 Sum_probs=41.2
Q ss_pred ecC-CCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPD-DKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d-~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+ ++|++|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 21 Pf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~ 76 (318)
T 3qfe_A 21 FFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKA 76 (318)
T ss_dssp CEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHH
Confidence 347 8999999999999999888876666776666666666666666677766554
No 500
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=24.50 E-value=48 Score=35.11 Aligned_cols=54 Identities=9% Similarity=-0.014 Sum_probs=36.5
Q ss_pred ecCCCCcccHHHHHHHHHhhhhcCCcceEEEeecccCccccccCHHHHHHHHHHc
Q psy852 170 EPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEF 224 (891)
Q Consensus 170 ~~d~~g~id~~~L~~~l~~~~~~g~~p~~V~~t~Gtt~~GavDpl~~I~~i~~~~ 224 (891)
|.+++| +|.+.|++.++...++|-.-+++..|.|-..+=+.+.-.++.+.+.+.
T Consensus 13 Pf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 66 (291)
T 3a5f_A 13 PFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDK 66 (291)
T ss_dssp CBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHH
T ss_pred CcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 457889 999999999998888775555555555554444445555566655543
Done!