RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy852
         (891 letters)



>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId:
           9823]}
          Length = 476

 Score =  181 bits (461), Expect = 4e-50
 Identities = 130/327 (39%), Positives = 187/327 (57%), Gaps = 45/327 (13%)

Query: 442 IRRHCELAKLFEGKVRRDPRFEISNDVRSSASECIFVCMLAARAQAISKLKKIHPFVDEG 501
           +    ++ +L E  +  +        ++ SASE   V +LAAR + + +L+   P + +G
Sbjct: 119 MDWLGKMLQLPEAFLAGEAGEGGGV-IQGSASEATLVALLAARTKVVRRLQAASPGLTQG 177

Query: 502 VLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMGYIPF 561
            +L KL+AY S +AHS VE+A ++  V+LK +  D K ++R + L++ +++D+  G IPF
Sbjct: 178 AVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPF 237

Query: 562 FVSTTLGTTSC------------------------------------YRKSQGIEYADSF 585
           FV  TLGTTSC                                         G+E+ADSF
Sbjct: 238 FVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSF 297

Query: 586 NVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEGA---IDYRHWGIPLSRRF 642
           N N +KWLL  FD S +WV  R  LT A  +DP+YL+H H+G+    DYRHW +PL RRF
Sbjct: 298 NFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRF 357

Query: 643 RSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRRDPRFEISNDVRLGLVCFRLRSEN 702
           RSLK+WFV R YG+ GLQ YIR+H +L+  FE  V +DPRFE+  +V LGLVCFRL+  +
Sbjct: 358 RSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSD 417

Query: 703 NLIADQNNRKLLEDINASGRLHMVPAS 729
            L     N  LLE IN++ ++H+VP  
Sbjct: 418 GL-----NEALLERINSARKIHLVPCR 439



 Score =  158 bits (400), Expect = 5e-42
 Identities = 118/265 (44%), Positives = 159/265 (60%), Gaps = 30/265 (11%)

Query: 4   LFHFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVL 63
           +   +   VTHW  P F AYFP+ +SYP++LADML  AIGCIGFSWAASP+CTELET+++
Sbjct: 60  VEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMM 119

Query: 64  DWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVL 123
           DWLGK + LPE FL                                G     S   ++ L
Sbjct: 120 DWLGKMLQLPEAFLAGEAGEGGGVIQ--------------------GSA---SEATLVAL 156

Query: 124 T-------RGQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEPDDKNS 176
                   R  +   P + +G +L KL+AY S +AHS VE+A ++  V+LK +  D K +
Sbjct: 157 LAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSDGKFA 216

Query: 177 LRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAG 236
           +R + L++ +++D+  G IPFFV  TLGTTSCCSFDNL E+GP+  E D+WLHVD AYAG
Sbjct: 217 MRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAG 276

Query: 237 SSFICPEFRPFMNGKTSFDNLHLSP 261
           S+FICPEFR  +NG    D+ + +P
Sbjct: 277 SAFICPEFRHLLNGVEFADSFNFNP 301



 Score =  115 bits (288), Expect = 1e-27
 Identities = 84/144 (58%), Positives = 105/144 (72%), Gaps = 3/144 (2%)

Query: 331 FDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLT 390
            D+WLHVD AYAGS+FICPEFR  +NG+E+ADSFN N +KWLL  FD S +WV  R  LT
Sbjct: 264 EDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLT 323

Query: 391 SALVVDPLYLQHGHEGA---IDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCE 447
            A  +DP+YL+H H+G+    DYRHW +PL RRFRSLK+WFV R YG+ GLQ YIR+H +
Sbjct: 324 GAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQ 383

Query: 448 LAKLFEGKVRRDPRFEISNDVRSS 471
           L+  FE  V +DPRFE+  +V   
Sbjct: 384 LSHEFEAFVLQDPRFEVCAEVTLG 407



 Score = 43.7 bits (102), Expect = 7e-05
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 765 RLRSENNLIADHPLQLGLVCFRLRSENNVIADQNNRKLLEDINASGRLHMVPASFE 820
            +  +        + LGLVCFRL+  + +     N  LLE IN++ ++H+VP    
Sbjct: 391 FVLQDPRFEVCAEVTLGLVCFRLKGSDGL-----NEALLERINSARKIHLVPCRLR 441


>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB
           {Escherichia coli [TaxId: 562]}
          Length = 450

 Score = 79.5 bits (195), Expect = 5e-16
 Identities = 37/278 (13%), Positives = 75/278 (26%), Gaps = 58/278 (20%)

Query: 470 SSASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVR 529
             +SE   +  +A + +   +++      D                  C  K A    V 
Sbjct: 122 IGSSEACMLGGMAMKWRWRKRMEAAGKPTD-------KPNLVCGPVQICWHKFARYWDVE 174

Query: 530 LKILEPDDKN-SLRGATLRQVMQQDETMGYIPFFVSTTLGTTSC---------------- 572
           L+ +        +    + +   ++ T+G +P F  T  G                    
Sbjct: 175 LREIPMRPGQLFMDPKRMIEACDEN-TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTG 233

Query: 573 ----------------------YRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKL 610
                                       +    S + + +K+ L       +   D   L
Sbjct: 234 IDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEAL 293

Query: 611 TSALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSL-KLWFVIRTYGLSGLQKYIRRHCEL 669
              LV +  YL            + I  SR    +   ++     G  G  K      ++
Sbjct: 294 PQELVFNVDYLGG------QIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQV 347

Query: 670 AKLFEGKVRRDPRFEI----SNDVRLGLVCFRLRSENN 703
           A     ++ +   +E       D  +  VCF+L+   +
Sbjct: 348 AAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED 385



 Score = 77.2 bits (189), Expect = 2e-15
 Identities = 19/237 (8%), Positives = 51/237 (21%), Gaps = 35/237 (14%)

Query: 30  YPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTP 89
               +  ++  +I          P    ++   ++ +      P                
Sbjct: 66  DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKN------------ 113

Query: 90  NDIDMNIEDYMTPANQPQSLGGGVIQ---SVQNIIVLTRGQKKIHPFVDEGVLLSKLMAY 146
                                 G      S   ++     + +    ++     +     
Sbjct: 114 ------------------GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNL 155

Query: 147 CSKEAHSCVEKAAMMAFVRLKILEPDDKN-SLRGATLRQVMQQDETMGYIPFFVSTTLGT 205
                  C  K A    V L+ +        +    + +   ++       F V+ T   
Sbjct: 156 VCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY 215

Query: 206 TSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSF-ICPEFRPFMNGKTSFDNLHLSP 261
                  +  +        D+ +H+D A  G           +        ++  S 
Sbjct: 216 EFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASG 272



 Score = 64.9 bits (157), Expect = 2e-11
 Identities = 28/270 (10%), Positives = 61/270 (22%), Gaps = 73/270 (27%)

Query: 268 SSASECIFVCMLSARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVE--------- 318
             +SE   +  ++ + +   +++      D                  C           
Sbjct: 122 IGSSEACMLGGMAMKWRWRKRMEAAGKPTD-------KPNLVCGPVQICWHKFARYWDVE 174

Query: 319 ----------TRGHIQSYRDAI-------------------------------------F 331
                          +   +A                                       
Sbjct: 175 LREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGI 234

Query: 332 DVWLHVDGAYAGSSF-ICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLT 390
           D+ +H+D A  G           +   +    S + + +K+ L       +   D   L 
Sbjct: 235 DIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALP 294

Query: 391 SALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSL-KLWFVIRTYGLSGLQKYIRRHCELA 449
             LV +  YL            + I  SR    +   ++     G  G  K      ++A
Sbjct: 295 QELVFNVDYLGG------QIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVA 348

Query: 450 KLFEGKVRRDPRFEI--SNDVRSSASECIF 477
                ++ +   +E   +           F
Sbjct: 349 AYLADEIAKLGPYEFICTGRPDEGIPAVCF 378


>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS)
           {Methanococcus maripaludis [TaxId: 39152]}
          Length = 434

 Score = 68.8 bits (167), Expect = 1e-12
 Identities = 45/308 (14%), Positives = 85/308 (27%), Gaps = 66/308 (21%)

Query: 6   HFLSHQVTHWQHPRFHAYFPSGNSYPSVLADMLSDAIGCIGFSWAASPSCTELETIVLDW 65
              S           H    SGN     L D    A G              L   +L+ 
Sbjct: 75  RTYSKIHEELSSGFCHGIGRSGN-----LVDPQPKASGASIMYA--------LTNKILES 121

Query: 66  LGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQSLGGGVIQSVQNIIVLTR 125
             K +GL    +  P                                    +   + L+ 
Sbjct: 122 FFKQLGLNVHAIATPIST--------------------------------GMSISLCLSA 149

Query: 126 GQKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILEP---DDKNSLRGATL 182
            +KK              +      +H    KA     + ++++E     D+  +    +
Sbjct: 150 ARKKYG----------SNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDI 199

Query: 183 RQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICP 242
              ++++  +G  P  +ST        S D + EI  + + +D+   ++GAYA  +    
Sbjct: 200 ENAIKKEIELGNRPCVLSTLTFFPPRNSDD-IVEIAKICENYDIPHIINGAYAIQNNYYL 258

Query: 243 EFRPFMNGKTSFDNLHLSP-IWYERPSSASECIFVCMLSARAQAISKLKKIHPFVDEGVL 301
           E       K   D +  S       P          + S  A+ I ++   +P       
Sbjct: 259 EK-LKKAFKYRVDAVVSSSDKNLLTP-----IGGGLVYSTDAEFIKEISLSYPGRASATP 312

Query: 302 LSKLMAYC 309
           +   +   
Sbjct: 313 VVNTLVSL 320



 Score = 44.5 bits (104), Expect = 4e-05
 Identities = 28/232 (12%), Positives = 57/232 (24%), Gaps = 59/232 (25%)

Query: 267 PSSASECIFVCMLSARAQAISK----LKKIHPFVDEGVLLSKLM------AYCSKEAHSC 316
           P S    I +C+ +AR +  S         H    + V    +              +  
Sbjct: 136 PISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVP 195

Query: 317 VET-RGHIQSYRDAI-----------------------------FDVWLHVDGAYAGSSF 346
           VE     I+   +                               +D+   ++GAYA  + 
Sbjct: 196 VEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNN 255

Query: 347 ICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVDPLYLQHGHEG 406
              E           D+   + +K LLT      ++  D                     
Sbjct: 256 YYLEK-LKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDA----------------EFIK 298

Query: 407 AIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKVRR 458
            I   +     +     +     + + G     + ++      KL +  +  
Sbjct: 299 EISLSYP--GRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLND 348



 Score = 44.5 bits (104), Expect = 4e-05
 Identities = 32/274 (11%), Positives = 78/274 (28%), Gaps = 44/274 (16%)

Query: 471 SASECIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRL 530
           S    I +C+ AAR +  S                  +      +H    KA     + +
Sbjct: 138 STGMSISLCLSAARKKYGSN-----------------VVIYPYASHKSPIKAVSFVGMNM 180

Query: 531 KILEP---DDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCYRK--SQGIEYADSF 585
           +++E     D+  +    +   ++++  +G  P  +ST             +  +  +++
Sbjct: 181 RLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENY 240

Query: 586 NVNVN-------------KWLLTAFDSSCLWVA-DRYKLTSALVVDPLYLQHGHEGAIDY 631
           ++                + L  AF      V     K     +   L      E   + 
Sbjct: 241 DIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEI 300

Query: 632 RHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFE---GKVRRDPRFEISND 688
                  +     +     + + G     + ++      KL +     + +    +  + 
Sbjct: 301 SLSYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDV 360

Query: 689 VRLGLVCFRLRSENNLIADQNNRKLLEDINASGR 722
                 C  + S+   IA       L ++  +G 
Sbjct: 361 ESPIASCISVNSDPVEIA-----AKLYNLRVTGP 389


>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS)
           {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 445

 Score = 63.0 bits (152), Expect = 8e-11
 Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 1/117 (0%)

Query: 146 YCSKEAHSCVEKAAMMAFVRLKILEPDDKNSLRGATLRQVMQQDETMG-YIPFFVSTTLG 204
              +       K+ + A     ++E   +       L+ V  + + +G      + +T  
Sbjct: 144 IWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTA 203

Query: 205 TTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAGSSFICPEFRPFMNGKTSFDNLHLSP 261
             +    D L E+  +   +D+   V+ AY   S  C             D    S 
Sbjct: 204 CFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSL 260



 Score = 51.9 bits (123), Expect = 2e-07
 Identities = 21/185 (11%), Positives = 49/185 (26%), Gaps = 6/185 (3%)

Query: 331 FDVWLHVDGAYAGSSFICPEFRPFMNGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLT 390
           +D+   V+ AY   S  C         +   D+F  +++K  +     + +   +   + 
Sbjct: 223 YDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQ 282

Query: 391 SALVVDPLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAK 450
               +  +Y                 LS      +     R      L   +++  E   
Sbjct: 283 D---ISKMYPGRASASPS-LDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHN 338

Query: 451 LFEGKVRRDPRFEISNDVRSSASECIFVCMLAAR--AQAISKLKKIHPFVDEGVLLSKLM 508
               +   +P                 V  L +    + +S  + +     + V      
Sbjct: 339 ERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFR 398

Query: 509 AYCSK 513
            + S 
Sbjct: 399 GFMSH 403



 Score = 38.4 bits (88), Expect = 0.003
 Identities = 21/250 (8%), Positives = 56/250 (22%), Gaps = 57/250 (22%)

Query: 475 CIFVCMLAARAQAISKLKKIHPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVRLKILE 534
            + +C L  R +       I                  +       K+ + A     ++E
Sbjct: 125 SLTLCFLTLRHKRPKAKYII----------------WPRIDQKSCFKSMVTAGFEPVVIE 168

Query: 535 PDDKNSLRGATLRQVMQQDETMG-YIPFFVSTTLGTT----------------------- 570
              +       L+ V  + + +G      + +T                           
Sbjct: 169 NVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHV 228

Query: 571 -------------SCYRKSQGIEYADSFNVNVNKWLLTAFDSSCLWVADRYKLTSALVVD 617
                           ++   +   D+F  +++K  +     + +   +   +     + 
Sbjct: 229 VNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQD---IS 285

Query: 618 PLYLQHGHEGAIDYRHWGIPLSRRFRSLKLWFVIRTYGLSGLQKYIRRHCELAKLFEGKV 677
            +Y                 LS      +     R      L   +++  E       + 
Sbjct: 286 KMYPGRASASPS-LDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQT 344

Query: 678 RRDPRFEISN 687
             +P      
Sbjct: 345 PHNPISLAMT 354


>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola
           [TaxId: 549]}
          Length = 456

 Score = 31.3 bits (70), Expect = 0.53
 Identities = 10/65 (15%), Positives = 22/65 (33%), Gaps = 1/65 (1%)

Query: 189 DETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGA-YAGSSFICPEFRPF 247
            E + YI   V+  L      S  N+  +  +A  + + +  D      +++   E    
Sbjct: 172 AENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAG 231

Query: 248 MNGKT 252
               +
Sbjct: 232 YENVS 236


>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase)
           {Escherichia coli [TaxId: 562]}
          Length = 467

 Score = 29.9 bits (66), Expect = 1.7
 Identities = 31/188 (16%), Positives = 57/188 (30%), Gaps = 33/188 (17%)

Query: 48  SWAASPSCTELETIVLDWLGKAIGLPEKFLMYPPQGKNATTPNDIDMNIEDYMTPANQPQ 107
           +++ S S   L   V +  G       ++ +   QG                   A Q  
Sbjct: 69  AFSGSRSYYALAESVKNIFGY------QYTIPTHQG-----------------RGAEQ-- 103

Query: 108 SLGGGVIQSVQNIIVLTRGQKKI--HPFVDEGVLLSKLMAYCSKEAHSCVEKAAMMAFVR 165
                +I+  +    L R +     + F D                 +   K A    VR
Sbjct: 104 IYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQ---GHSQINGCTVRNVYIKEAFDTGVR 160

Query: 166 LKILEPDDKNSLRGATLRQVMQQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFD 225
                  D   L    + +V      + YI   +++        S  NL  +  +AK++D
Sbjct: 161 YDFKGNFDLEGLE-RGIEEV--GPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYD 217

Query: 226 VWLHVDGA 233
           + + +D A
Sbjct: 218 IPVVMDSA 225


>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase)
           {Proteus vulgaris [TaxId: 585]}
          Length = 465

 Score = 29.5 bits (65), Expect = 2.1
 Identities = 10/50 (20%), Positives = 20/50 (40%)

Query: 187 QQDETMGYIPFFVSTTLGTTSCCSFDNLAEIGPVAKEFDVWLHVDGAYAG 236
              + +  I   V+         S  NL E+  +AK+  +++ +D A   
Sbjct: 178 HGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFC 227


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.136    0.421 

Gapped
Lambda     K      H
   0.267   0.0442    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,392,713
Number of extensions: 161748
Number of successful extensions: 297
Number of sequences better than 10.0: 1
Number of HSP's gapped: 288
Number of HSP's successfully gapped: 25
Length of query: 891
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 798
Effective length of database: 1,130,706
Effective search space: 902303388
Effective search space used: 902303388
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.5 bits)