BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8522
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24522|BUN1_DROME Protein bunched, class 1/class 3/D/E isoforms OS=Drosophila
melanogaster GN=bun PE=2 SV=2
Length = 219
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 44/47 (93%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQET 68
DLVKSHLM AVREEVEVLKE+I+ELM++IN+LE+ENSILK+N QET
Sbjct: 65 DLVKSHLMIAVREEVEVLKERISELMDKINKLELENSILKSNIPQET 111
>sp|Q24523|BUN2_DROME Protein bunched, class 2/F/G isoform OS=Drosophila melanogaster
GN=bun PE=2 SV=4
Length = 1331
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/47 (78%), Positives = 44/47 (93%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQET 68
DLVKSHLM AVREEVEVLKE+I+ELM++IN+LE+ENSILK+N QET
Sbjct: 1177 DLVKSHLMIAVREEVEVLKERISELMDKINKLELENSILKSNIPQET 1223
>sp|Q9Y3Q8|T22D4_HUMAN TSC22 domain family protein 4 OS=Homo sapiens GN=TSC22D4 PE=1 SV=2
Length = 395
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/52 (71%), Positives = 41/52 (78%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
DLVKSHLMFAVREEVEVLKE+I EL ER LE EN +L+A A+ E L QLP
Sbjct: 327 DLVKSHLMFAVREEVEVLKEQIRELAERNAALEQENGLLRALASPEQLAQLP 378
>sp|Q3B8N7|T22D4_RAT TSC22 domain family protein 4 OS=Rattus norvegicus GN=Tsc22d4 PE=2
SV=1
Length = 387
Score = 72.4 bits (176), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
DLVKSHLMFAVREEVEVLKE+I +L ER LE EN +L+A A+ E L QLP
Sbjct: 319 DLVKSHLMFAVREEVEVLKEQIRDLAERNAALEQENGLLRALASPEQLAQLP 370
>sp|Q9EQN3|T22D4_MOUSE TSC22 domain family protein 4 OS=Mus musculus GN=Tsc22d4 PE=2 SV=2
Length = 387
Score = 72.4 bits (176), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
DLVKSHLMFAVREEVEVLKE+I +L ER LE EN +L+A A+ E L QLP
Sbjct: 319 DLVKSHLMFAVREEVEVLKEQIRDLAERNAALEQENGLLRALASPEQLAQLP 370
>sp|O75157|T22D2_HUMAN TSC22 domain family protein 2 OS=Homo sapiens GN=TSC22D2 PE=1 SV=3
Length = 780
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/52 (65%), Positives = 44/52 (84%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
DLVKSHLM+AVREEVEVLKE+I EL+ER + LE EN++LK+ ++ + L QLP
Sbjct: 695 DLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQLSQLP 746
>sp|P62500|T22D1_MOUSE TSC22 domain family protein 1 OS=Mus musculus GN=Tsc22d1 PE=2 SV=2
Length = 1077
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQE 67
DLVKSHLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E
Sbjct: 993 DLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 1038
>sp|Q15714|T22D1_HUMAN TSC22 domain family protein 1 OS=Homo sapiens GN=TSC22D1 PE=1 SV=3
Length = 1073
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQE 67
DLVKSHLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E
Sbjct: 989 DLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 1034
>sp|Q91012|T22D1_CHICK TSC22 domain family protein 1 OS=Gallus gallus GN=TSC22D1 PE=2 SV=2
Length = 1040
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQE 67
DLVKSHLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E
Sbjct: 956 DLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENTLLKTLASPE 1001
>sp|Q5R4H1|T22D1_PONAB TSC22 domain family protein 1 OS=Pongo abelii GN=TSC22D1 PE=2 SV=2
Length = 1070
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQE 67
DLVKSHLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E
Sbjct: 986 DLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 1031
>sp|Q4R4H5|T22D1_MACFA TSC22 domain family protein 1 OS=Macaca fascicularis GN=TSC22D1
PE=2 SV=1
Length = 144
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQE 67
DLVKSHLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E
Sbjct: 60 DLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 105
>sp|Q3MHL6|T22D1_BOVIN TSC22 domain family protein 1 OS=Bos taurus GN=TSC22D1 PE=2 SV=1
Length = 144
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQE 67
DLVKSHLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E
Sbjct: 60 DLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 105
>sp|Q27I66|T22D1_BATSU TSC22 domain family protein 1 OS=Bathyergus suillus GN=TSC22D1 PE=2
SV=1
Length = 144
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQE 67
DLVKSHLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E
Sbjct: 60 DLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 105
>sp|P62501|T22D1_RAT TSC22 domain family protein 1 OS=Rattus norvegicus GN=Tsc22d1 PE=2
SV=1
Length = 143
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQE 67
DLVKSHLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E
Sbjct: 59 DLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 104
>sp|Q9Z2S7|T22D3_MOUSE TSC22 domain family protein 3 OS=Mus musculus GN=Tsc22d3 PE=1 SV=2
Length = 137
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETL 69
DLVK+HLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E L
Sbjct: 59 DLVKNHLMYAVREEVEVLKEQIRELLEKNSQLERENTLLKTLASPEQL 106
>sp|Q9EQZ1|T22D3_RAT TSC22 domain family protein 3 OS=Rattus norvegicus GN=Tsc22d3 PE=2
SV=1
Length = 134
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 41/48 (85%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETL 69
DLVK+HLM+AVREEVEVLKE+I EL+E+ +QLE EN++LK A+ E L
Sbjct: 59 DLVKNHLMYAVREEVEVLKEQIRELVEKNSQLERENTLLKTLASPEQL 106
>sp|Q5RED5|T22D3_PONAB TSC22 domain family protein 3 OS=Pongo abelii GN=TSC22D3 PE=2 SV=1
Length = 134
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETL 69
DLVK+HLM+AVREEVE+LKE+I EL+E+ +QLE EN++LK A+ E L
Sbjct: 59 DLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPEQL 106
>sp|Q99576|T22D3_HUMAN TSC22 domain family protein 3 OS=Homo sapiens GN=TSC22D3 PE=1 SV=2
Length = 134
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETL 69
DLVK+HLM+AVREEVE+LKE+I EL+E+ +QLE EN++LK A+ E L
Sbjct: 59 DLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPEQL 106
>sp|P80220|T22D3_PIG TSC22 domain family protein 3 OS=Sus scrofa GN=TSC22D3 PE=1 SV=1
Length = 77
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 41/48 (85%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETL 69
DLVK+HLM+AVREEVE+LKE+I EL+E+ +QLE EN++LK A+ E L
Sbjct: 2 DLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPEQL 49
>sp|Q22544|YAE7_CAEEL Uncharacterized protein T18D3.7 OS=Caenorhabditis elegans
GN=T18D3.7 PE=3 SV=2
Length = 131
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 22 DLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQETLG 70
DLVK+HL FAVREEVE L+ I +L R+N L EN +L+ N + E L
Sbjct: 73 DLVKTHLTFAVREEVETLRTTITDLEARLNALREENRLLRENVSPEVLA 121
>sp|Q6A163|K1C39_HUMAN Keratin, type I cytoskeletal 39 OS=Homo sapiens GN=KRT39 PE=1 SV=2
Length = 491
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 28/41 (68%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
+E +++L E++A ++++ LE EN+ L++ +E+ +LP
Sbjct: 97 KETMQILNERLANYLQKVRMLERENAELESKIQEESNKELP 137
>sp|Q61897|KT33B_MOUSE Keratin, type I cuticular Ha3-II OS=Mus musculus GN=Krt33b PE=2
SV=2
Length = 404
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
RE ++ L +++A ME++ QLE EN+ L+ + Q P
Sbjct: 57 RETMQFLNDRLASYMEKVRQLERENAELECKIQERNQQQDP 97
>sp|Q497I4|KRT35_MOUSE Keratin, type I cuticular Ha5 OS=Mus musculus GN=Krt35 PE=2 SV=1
Length = 455
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLPH 74
+E ++ L +++A +E++ QLE EN+ L++ + Q+P+
Sbjct: 98 KETMQSLNDRLASYLEKVRQLEQENASLESRIREWCEQQVPY 139
>sp|Q2S1G4|SYS_SALRD Serine--tRNA ligase OS=Salinibacter ruber (strain DSM 13855 / M31)
GN=serS PE=3 SV=1
Length = 428
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query: 34 EEVEVLKEKIAELMERINQLEMENSILKANATQE----TLGQLPHPN 76
EE E + EK + E+IN+L+ E + +A A QE L +PHP+
Sbjct: 70 EEAEAIIEKTGRMKEKINRLKEE--VQEAEARQEELVLELPNIPHPS 114
>sp|Q74ZD5|SEY1_ASHGO Protein SEY1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=SEY1 PE=3 SV=1
Length = 791
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 15 IFAYHIKDLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQET 68
+F D V L+ +V + L EKI EL ER EM+ IL+A Q T
Sbjct: 423 VFEQETSDFVALELIPSVDADASALLEKIDELAERERGKEMKAIILRAKKYQFT 476
>sp|Q05A80|CAPR2_MOUSE Caprin-2 OS=Mus musculus GN=Caprin2 PE=1 SV=1
Length = 1031
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 19 HIKDLVKSHLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQ--ETLGQLPHP 75
H+KDL+ L E V VL+ + E + Q EM+ +LK+ + + E+L +L P
Sbjct: 219 HVKDLLSKLLHSGYFESVPVLRNSKEKAEEVLMQSEMKKQLLKSESIKESESLTELVQP 277
>sp|P02534|K1M1_SHEEP Keratin, type I microfibrillar 48 kDa, component 8C-1 OS=Ovis
aries PE=1 SV=2
Length = 412
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
+E ++ L +++A +E++ QLE EN+ L++ + + Q P
Sbjct: 56 KETMQFLNDRLASYLEKVRQLERENAELESRILERSQQQEP 96
>sp|Q8K0Y2|KT33A_MOUSE Keratin, type I cuticular Ha3-I OS=Mus musculus GN=Krt33a PE=2
SV=1
Length = 404
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
+E ++ L +++A ME++ QLE EN+ L+ + Q P
Sbjct: 57 KETMQFLNDRLASYMEKVRQLERENAELECRIQERNQQQDP 97
>sp|Q61765|K1H1_MOUSE Keratin, type I cuticular Ha1 OS=Mus musculus GN=Krt31 PE=2 SV=2
Length = 416
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
+E ++ L +++A ME++ QLE EN+ L+ + Q P
Sbjct: 57 KETMQFLNDRLASYMEKVRQLERENAELECRIQERNQQQDP 97
>sp|Q62168|K1H2_MOUSE Keratin, type I cuticular Ha2 OS=Mus musculus GN=Krt32 PE=2 SV=2
Length = 407
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQL 72
+E ++VL +++A +E++ QLE EN+ L+ GQ+
Sbjct: 56 KETMQVLNDRLANYLEKVRQLEKENAELEGKIQDVYQGQV 95
>sp|Q9D646|KRT34_MOUSE Keratin, type I cuticular Ha4 OS=Mus musculus GN=Krt34 PE=2 SV=1
Length = 392
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
+E ++ L +++A ME++ QLE EN+ L+ + Q P
Sbjct: 57 KETMQFLNDRLASYMEKVRQLERENAELECRIQERNQQQDP 97
>sp|Q92764|KRT35_HUMAN Keratin, type I cuticular Ha5 OS=Homo sapiens GN=KRT35 PE=2 SV=5
Length = 455
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLPH 74
+E ++ L +++A +E++ QLE EN+ L++ + Q+P+
Sbjct: 98 KETMQSLNDRLAGYLEKVRQLEQENASLESRIREWCEQQVPY 139
>sp|B0LKP1|KRT35_SHEEP Keratin, type I cuticular Ha5 OS=Ovis aries GN=KRT35 PE=2 SV=1
Length = 455
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 26/42 (61%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLPH 74
+E ++ L +++A +E++ QLE EN+ L++ Q+P+
Sbjct: 98 KETMQFLNDRLASYLEKVRQLERENAELESRIRDWCEQQVPY 139
>sp|A5X7A0|SOBPA_DANRE Sine oculis-binding protein homolog OS=Danio rerio GN=sobpa PE=2
SV=1
Length = 936
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 34 EEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLPHPNSS 78
+++E+ E+ + I+ L+ ENS+ KA+ + + G PH NSS
Sbjct: 81 DDIEIRNYPDGEMRQHISVLK-ENSLPKASTLENSSGSPPHANSS 124
>sp|Q08DX0|SNX29_BOVIN Sorting nexin-29 OS=Bos taurus GN=SNX29 PE=2 SV=1
Length = 817
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 31 AVREEVEVLKEKIAELMER----INQLEMENSILK 61
A+R+EV+ LK K+AE ER + L EN +LK
Sbjct: 505 ALRQEVDTLKRKVAEQEERHVTKVQALARENEVLK 539
>sp|O76013|KRT36_HUMAN Keratin, type I cuticular Ha6 OS=Homo sapiens GN=KRT36 PE=1 SV=1
Length = 467
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 27/42 (64%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLPH 74
+E ++ L +++A +E++ QLE EN+ L++ + Q+P+
Sbjct: 94 KETMQFLNDRLANYLEKVRQLERENAELESRIQEWYEFQIPY 135
>sp|O76015|KRT38_HUMAN Keratin, type I cuticular Ha8 OS=Homo sapiens GN=KRT38 PE=2 SV=3
Length = 456
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQET 68
+E ++ L +++A +E++ QLE EN+ L+A + +
Sbjct: 105 KETMQFLNDRLANYLEKVRQLEQENAELEATLLERS 140
>sp|Q8TEQ0|SNX29_HUMAN Sorting nexin-29 OS=Homo sapiens GN=SNX29 PE=1 SV=3
Length = 813
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 31 AVREEVEVLKEKIAELMER----INQLEMENSILK 61
A+R+EV+ LK K+AE ER + L EN +LK
Sbjct: 504 ALRQEVDTLKRKVAEQEERQGMKVQALARENEVLK 538
>sp|B1AQ75|KRT36_MOUSE Keratin, type I cuticular Ha6 OS=Mus musculus GN=Krt36 PE=1 SV=1
Length = 473
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 26/42 (61%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLPH 74
+ +++L +++A +E++ QLE EN+ L+ + Q+P+
Sbjct: 94 KATMQILNDRLANYLEKVRQLEQENTQLECRIREWYECQIPY 135
>sp|Q90501|TBFA_EPTST Thread biopolymer filament subunit alpha OS=Eptatretus stoutii PE=1
SV=1
Length = 643
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 27 HLMFAVREEVEVLKEKIAELMERINQLEMENSILKANATQET 68
H +++++ L K A L++++ LE N+ILKA + T
Sbjct: 187 HTRIREKQDLQTLNTKFANLVDQVRTLEQHNAILKAQISMIT 228
>sp|P20434|RPAB1_YEAST DNA-directed RNA polymerases I, II, and III subunit RPABC1
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=RPB5 PE=1 SV=1
Length = 215
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 20 IKDLVKSHLMFAVREEVEV----LKEKIAELMERINQLEMENSILKANATQETLGQLP 73
+K++VK F +EEVE+ K K + M R + M +AN T+E++ + P
Sbjct: 19 VKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMS---FQANPTEESISKFP 73
>sp|P25690|K1M2_SHEEP Keratin, type I microfibrillar, 47.6 kDa OS=Ovis aries PE=3 SV=2
Length = 404
Score = 28.9 bits (63), Expect = 9.2, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 33 REEVEVLKEKIAELMERINQLEMENSILKANATQETLGQLP 73
+E ++ L +++A +E++ QLE EN+ L+ + + Q P
Sbjct: 57 KETMQFLNDRLASYLEKVRQLERENAELERRILERSQQQEP 97
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,414,287
Number of Sequences: 539616
Number of extensions: 802912
Number of successful extensions: 5495
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5418
Number of HSP's gapped (non-prelim): 97
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)