BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8527
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BG09|T184B_MOUSE Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1
Length = 407
Score = 169 bits (429), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 102/136 (75%), Gaps = 5/136 (3%)
Query: 76 STSTVAPTIF--PFIQPV---HPIFLQTKTAQGLASAFVGAALFLTCQQIYMHLKWYTNP 130
+T+T +P++ P P HP+FL T AQ ++ FV AL +TC QIYMHL+ Y+ P
Sbjct: 16 TTTTASPSVSATPEGSPTAMEHPVFLMTTAAQAISGFFVWTALLITCHQIYMHLRCYSRP 75
Query: 131 AEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEAFVIYSFLSLCYEYLG 190
EQR I+RILFIVPIYA S +SLLFF N+ YY+YF T+RDCYEAFVIY+FLSLCYEYLG
Sbjct: 76 NEQRHIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEAFVIYNFLSLCYEYLG 135
Query: 191 GEGNIMSEIRGKPIKA 206
GE IMSEIRGK I++
Sbjct: 136 GESAIMSEIRGKAIES 151
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 44/54 (81%)
Query: 1 MHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
MHL+ Y+ P EQR I+RILFIVPIYA S +SLLFF N+ YY+YF T+RDCYEA
Sbjct: 67 MHLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEA 120
>sp|Q9Y519|T184B_HUMAN Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2
Length = 407
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
Query: 61 VTATIPPQEILAEMTSTSTVAPTIFPFIQPVHPIFLQTKTAQGLASAFVGAALFLTCQQI 120
V A P A + + +V P P P+FL T AQ ++ FV AL +TC QI
Sbjct: 7 VLAPDPASPTTAAASPSVSVIPEGSPTAME-QPVFLMTTAAQAISGFFVWTALLITCHQI 65
Query: 121 YMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEAFVIYS 180
YMHL+ Y+ P EQR+I+RILFIVPIYA S +SLLFF N+ YY+YF T+RDCYEA VIY+
Sbjct: 66 YMHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEALVIYN 125
Query: 181 FLSLCYEYLGGEGNIMSEIRGKPIKA 206
FLSLCYEYLGGE +IMSEIRGKPI++
Sbjct: 126 FLSLCYEYLGGESSIMSEIRGKPIES 151
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 1 MHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
MHL+ Y+ P EQR+I+RILFIVPIYA S +SLLFF N+ YY+YF T+RDCYEA
Sbjct: 67 MHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEA 120
>sp|A2VDL9|T184B_BOVIN Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1
Length = 407
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 102/136 (75%), Gaps = 5/136 (3%)
Query: 76 STSTVAPTI--FPFIQPV---HPIFLQTKTAQGLASAFVGAALFLTCQQIYMHLKWYTNP 130
+T+ +P+I P P P+FL T AQ ++ FV AL +TC QIYMHL+ Y+ P
Sbjct: 16 TTAAASPSISVIPEGSPTAMEQPVFLMTTAAQAISGFFVWTALLITCHQIYMHLRCYSCP 75
Query: 131 AEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEAFVIYSFLSLCYEYLG 190
EQR+I+RILFIVPIYA S +SLLFF N+ YY+YF T+RDCYEA VIY+FLSLCYEYLG
Sbjct: 76 NEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEALVIYNFLSLCYEYLG 135
Query: 191 GEGNIMSEIRGKPIKA 206
GE +IMSEIRGKPI++
Sbjct: 136 GESSIMSEIRGKPIES 151
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 45/54 (83%)
Query: 1 MHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
MHL+ Y+ P EQR+I+RILFIVPIYA S +SLLFF N+ YY+YF T+RDCYEA
Sbjct: 67 MHLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQYYVYFGTVRDCYEA 120
>sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1
Length = 413
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/113 (63%), Positives = 90/113 (79%)
Query: 94 IFLQTKTAQGLASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVS 153
+FL + A+G++ FV AL LTC QIY+HL+ YT P EQR+IIR+L IVPIYA S +S
Sbjct: 48 LFLTSALARGVSGIFVWTALVLTCHQIYLHLRSYTVPQEQRYIIRLLLIVPIYAFDSWLS 107
Query: 154 LLFFNNENYYIYFFTIRDCYEAFVIYSFLSLCYEYLGGEGNIMSEIRGKPIKA 206
LL + YY+YF ++RDCYEAFVIYSFLSLC++YLGGEG IM+EIRGKPIK+
Sbjct: 108 LLLLGDHQYYVYFDSVRDCYEAFVIYSFLSLCFQYLGGEGAIMAEIRGKPIKS 160
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 1 MHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
+HL+ YT P EQR+IIR+L IVPIYA S +SLL + YY+YF ++RDCYEA
Sbjct: 76 LHLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLLLLGDHQYYVYFDSVRDCYEA 129
>sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1
Length = 414
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 90/117 (76%)
Query: 89 QPVHPIFLQTKTAQGLASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYAL 148
Q P+FL + A+G++ FV AAL LT QIY+HL+ YT P EQR+IIR+LFIVP+YA
Sbjct: 33 QGPGPLFLTSPLARGVSGVFVWAALVLTGHQIYLHLRSYTVPHEQRYIIRLLFIVPVYAF 92
Query: 149 HSLVSLLFFNNENYYIYFFTIRDCYEAFVIYSFLSLCYEYLGGEGNIMSEIRGKPIK 205
S +SLL +YIYF ++RDCYEAFVIYSFLSLC++YLGGE IM+EIRGKP++
Sbjct: 93 DSWLSLLLLGGHQHYIYFDSVRDCYEAFVIYSFLSLCFQYLGGESAIMAEIRGKPVR 149
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 1 MHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
+HL+ YT P EQR+IIR+LFIVP+YA S +SLL +YIYF ++RDCYEA
Sbjct: 66 LHLRSYTVPHEQRYIIRLLFIVPVYAFDSWLSLLLLGGHQHYIYFDSVRDCYEA 119
>sp|Q3UFJ6|T184A_MOUSE Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1
Length = 425
Score = 140 bits (352), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 88/118 (74%)
Query: 89 QPVHPIFLQTKTAQGLASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYAL 148
Q +FL + A+G++ FV AL LT QIY HL+ YT P EQR++IR+LFIVPIYA
Sbjct: 46 QGAPQLFLTSALARGVSGVFVWTALLLTGHQIYSHLRSYTAPREQRFVIRLLFIVPIYAF 105
Query: 149 HSLVSLLFFNNENYYIYFFTIRDCYEAFVIYSFLSLCYEYLGGEGNIMSEIRGKPIKA 206
S +SLL YY+YF ++RDCYEAFVIYSFL+LC++YLGGE IM+EIRGKPI++
Sbjct: 106 DSWLSLLLLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLGGESAIMAEIRGKPIRS 163
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL+ YT P EQR++IR+LFIVPIYA S +SLL YY+YF ++RDCYEA
Sbjct: 80 HLRSYTAPREQRFVIRLLFIVPIYAFDSWLSLLLLGGHPYYVYFDSVRDCYEA 132
>sp|Q4QQS1|T184A_RAT Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2
SV=1
Length = 425
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 88/118 (74%)
Query: 89 QPVHPIFLQTKTAQGLASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYAL 148
Q +FL + A+G++ FV AL LT QIY HL+ YT P EQR++IR+LFIVPIYA
Sbjct: 46 QGAPQLFLTSALARGVSGVFVWTALLLTGHQIYSHLRSYTVPREQRFVIRLLFIVPIYAF 105
Query: 149 HSLVSLLFFNNENYYIYFFTIRDCYEAFVIYSFLSLCYEYLGGEGNIMSEIRGKPIKA 206
S +SLL YY+YF ++RDCYEAFVIYSFL+LC++YLGGE IM+EIRGKPI++
Sbjct: 106 DSWLSLLLLGGHPYYVYFDSVRDCYEAFVIYSFLTLCFQYLGGESAIMAEIRGKPIRS 163
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL+ YT P EQR++IR+LFIVPIYA S +SLL YY+YF ++RDCYEA
Sbjct: 80 HLRSYTVPREQRFVIRLLFIVPIYAFDSWLSLLLLGGHPYYVYFDSVRDCYEA 132
>sp|Q54PI4|T1841_DICDI Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium
discoideum GN=tmem184A PE=3 SV=1
Length = 493
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Query: 103 GLASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENY 162
LAS FV A L+ IY HLK+YT P QR+I+RI+F++PIYA++SL+SLL NY
Sbjct: 54 ALASLFVLLATILSAHLIYKHLKYYTQPDHQRYIVRIVFMIPIYAIYSLLSLLL---HNY 110
Query: 163 YIYFFTIRDCYEAFVIYSFLSLCYEYLGGEGNIMSEIRGKPI 204
+YF +RDCYEA+V+Y F +LC Y GG+ N+++ P+
Sbjct: 111 QVYFALLRDCYEAYVLYMFFALCVSYGGGDKNLVTHFTSHPV 152
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HLK+YT P QR+I+RI+F++PIYA++SL+SLL NY +YF +RDCYEA
Sbjct: 74 HLKYYTQPDHQRYIVRIVFMIPIYAIYSLLSLLL---HNYQVYFALLRDCYEA 123
>sp|Q75JN3|T1842_DICDI Transmembrane protein 184 homolog DDB_G0276041 OS=Dictyostelium
discoideum GN=tmem184B PE=3 SV=1
Length = 507
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 103 GLASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENY 162
+ S F ++ + I H Y P Q++I+RI+ I PIYA+HSL+S LFF + +
Sbjct: 17 SIGSFFALGSIIIAVILILQHFIHYNKPNHQKYIVRIIMIAPIYAIHSLLS-LFFKRQFW 75
Query: 163 YIYFFTIRDCYEAFVIYSFLSLCYEYLGGE 192
++F RDCYEA+V+Y F L +LGGE
Sbjct: 76 ALFFDISRDCYEAYVLYCFFKLLICFLGGE 105
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEARPLT--- 58
H Y P Q++I+RI+ I PIYA+HSL+S LFF + + ++F RDCYEA L
Sbjct: 37 HFIHYNKPNHQKYIVRIIMIAPIYAIHSLLS-LFFKRQFWALFFDISRDCYEAYVLYCFF 95
Query: 59 EVVTATIPPQEILAEMTSTSTVAPTIFP 86
+++ + +E L E+ S P +P
Sbjct: 96 KLLICFLGGEEALKELLSKKDTQPLTWP 123
>sp|Q54WM0|T1843_DICDI Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium
discoideum GN=tmem184C PE=3 SV=1
Length = 351
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 104 LASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYY 163
+A G A+ L+ IY HL+ YTNP Q++I+RIL +VPIY++ S +SL F
Sbjct: 4 VAGVCSGVAILLSFYLIYKHLRNYTNPELQKYIVRILIMVPIYSVDSWLSLRFV---ELS 60
Query: 164 IYFFTIRDCYEAFVIYSFLSLCYEYLGGEGNIMSEIRGK 202
+YF +RD YEA+V+Y F SL Y+ + +++ + K
Sbjct: 61 LYFDVVRDTYEAYVLYCFFSLIVAYIERDFDLVELLHSK 99
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 37/155 (23%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEARPLT--- 58
HL+ YTNP Q++I+RIL +VPIY++ S +SL F +YF +RD YEA L
Sbjct: 23 HLRNYTNPELQKYIVRILIMVPIYSVDSWLSLRFV---ELSLYFDVVRDTYEAYVLYCFF 79
Query: 59 EVVTATIPPQEILAEMTSTSTVAPTIFPFIQPVHPIFLQTKTAQGLASAFVGAALFLTC- 117
++ A I L E+ + P FP LTC
Sbjct: 80 SLIVAYIERDFDLVELLHSKEPLPHPFP----------------------------LTCL 111
Query: 118 QQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLV 152
+I + + TN +R++++ +FI PI A+ SLV
Sbjct: 112 PKIKLDRGFLTNC--KRFVLQFVFIKPIVAIISLV 144
>sp|Q09906|TM184_SCHPO Transmembrane protein 184 homolog C30D11.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC30D11.06c PE=1
SV=1
Length = 426
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 103 GLASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENY 162
L FV AL L+C I HLK Y P QR ++RIL ++ IY S VS L NE
Sbjct: 7 ALCGFFVAIALVLSCISIITHLKNYKKPVLQRSVVRILMMIVIY---SSVSFLSVYNEKI 63
Query: 163 YIYFFTIRDCYEAFVIYSFLSLCYEYLGGEGNIMSEIRGKPIKAR 207
F R+ YEAF +Y F L +YLGGE + + G + R
Sbjct: 64 GSIFEPFREIYEAFALYCFFCLLIDYLGGERAAVISLHGHLPRPR 108
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HLK Y P QR ++RIL ++ IY S VS L NE F R+ YEA
Sbjct: 27 HLKNYKKPVLQRSVVRILMMIVIY---SSVSFLSVYNEKIGSIFEPFREIYEA 76
>sp|Q5ZMP3|T184C_CHICK Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1
Length = 445
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 104 LASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYY 163
+A F+ + ++ I HL YT P Q+ IIRIL++VPIY+L S ++L + N
Sbjct: 49 IAGIFLLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY---PNIA 105
Query: 164 IYFFTIRDCYEAFVIYSFLSLCYEYL 189
IY T R+CYEA+VIY+F+ YL
Sbjct: 106 IYVDTCRECYEAYVIYNFMVFLSNYL 131
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL YT P Q+ IIRIL++VPIY+L S ++L + N IY T R+CYEA
Sbjct: 68 HLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY---PNIAIYVDTCRECYEA 117
>sp|Q28CV2|T184C_XENTR Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2
SV=1
Length = 443
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 104 LASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYY 163
+A FV + ++ I HL YT P Q+ IIRIL++VPIY++ S ++L + +
Sbjct: 49 IAGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIALKY---PDIA 105
Query: 164 IYFFTIRDCYEAFVIYSFLSLCYEYL 189
IY T R+CYEA+VIY+F+ YL
Sbjct: 106 IYVDTCRECYEAYVIYNFMIFLLNYL 131
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL YT P Q+ IIRIL++VPIY++ S ++L + + IY T R+CYEA
Sbjct: 68 HLVHYTQPELQKPIIRILWMVPIYSVDSWIALKY---PDIAIYVDTCRECYEA 117
>sp|Q6GQE1|T184C_XENLA Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1
Length = 444
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 104 LASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYY 163
+A FV + ++ I HL YT P Q+ IIRIL++VPIY++ S ++L + +
Sbjct: 49 IAGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIALKY---PDIA 105
Query: 164 IYFFTIRDCYEAFVIYSFLSLCYEYL 189
IY T R+CYEA+VIY+F+ YL
Sbjct: 106 IYVDTCRECYEAYVIYNFMIFLLNYL 131
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL YT P Q+ IIRIL++VPIY++ S ++L + + IY T R+CYEA
Sbjct: 68 HLVHYTQPELQKPIIRILWMVPIYSVDSWIALKY---PDIAIYVDTCRECYEA 117
>sp|Q17QL9|T184C_BOVIN Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1
Length = 438
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 120 IYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEAFVIY 179
I HL YT P Q+ IIRIL++VPIY+L S ++L + + IY T R+CYEA+VIY
Sbjct: 67 ILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY---PSIAIYVDTCRECYEAYVIY 123
Query: 180 SFLSLCYEYL 189
+F+ YL
Sbjct: 124 NFMGFLTNYL 133
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL YT P Q+ IIRIL++VPIY+L S ++L + + IY T R+CYEA
Sbjct: 70 HLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY---PSIAIYVDTCRECYEA 119
>sp|Q5RET6|T184C_PONAB Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1
Length = 438
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 120 IYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEAFVIY 179
I HL YT P Q+ IIRIL++VPIY+L S ++L + IY T R+CYEA+VIY
Sbjct: 67 ILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY---PGIAIYVDTCRECYEAYVIY 123
Query: 180 SFLSLCYEYL 189
+F+ YL
Sbjct: 124 NFMGFLTNYL 133
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL YT P Q+ IIRIL++VPIY+L S ++L + IY T R+CYEA
Sbjct: 70 HLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY---PGIAIYVDTCRECYEA 119
>sp|Q9NVA4|T184C_HUMAN Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2
Length = 438
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 120 IYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEAFVIY 179
I HL YT P Q+ IIRIL++VPIY+L S ++L + IY T R+CYEA+VIY
Sbjct: 67 ILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY---PGIAIYVDTCRECYEAYVIY 123
Query: 180 SFLSLCYEYL 189
+F+ YL
Sbjct: 124 NFMGFLTNYL 133
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL YT P Q+ IIRIL++VPIY+L S ++L + IY T R+CYEA
Sbjct: 70 HLVHYTQPELQKPIIRILWMVPIYSLDSWIALKY---PGIAIYVDTCRECYEA 119
>sp|Q3TPR7|T184C_MOUSE Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1
Length = 525
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 120 IYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEAFVIY 179
I HL YT P Q+ IIRIL++VPIY++ S V+L++ IY T R+CYEA+VIY
Sbjct: 67 ILQHLVHYTQPELQKPIIRILWMVPIYSVDSWVALVY---PKIAIYVDTWRECYEAYVIY 123
Query: 180 SFLSLCYEYL 189
+F+ YL
Sbjct: 124 NFMIFLTNYL 133
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL YT P Q+ IIRIL++VPIY++ S V+L++ IY T R+CYEA
Sbjct: 70 HLVHYTQPELQKPIIRILWMVPIYSVDSWVALVY---PKIAIYVDTWRECYEA 119
>sp|Q810F5|T184C_RAT Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2
SV=1
Length = 503
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 104 LASAFVGAALFLTCQQIYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYY 163
+A F+ + ++ I HL YT P Q+ IIRIL++VPIY+L S V+L +
Sbjct: 51 IAGIFLLLTIPVSMCGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWVALKY---PKIA 107
Query: 164 IYFFTIRDCYEAFVIYSFLSLCYEYL 189
IY T R+CYEA+VIY+F+ YL
Sbjct: 108 IYVDTWRECYEAYVIYNFMIFLTNYL 133
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL YT P Q+ IIRIL++VPIY+L S V+L + IY T R+CYEA
Sbjct: 70 HLVHYTQPELQKPIIRILWMVPIYSLDSWVALKY---PKIAIYVDTWRECYEA 119
>sp|P36142|TM184_YEAST Transmembrane protein 184 homolog YKR051W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKR051W PE=1
SV=1
Length = 418
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 120 IYMHLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEAFVIY 179
I HL Y P EQR IRIL +VPI+++ ++ E Y IR+ YEAFVIY
Sbjct: 29 ITRHLLNYRKPYEQRLSIRILLLVPIFSVSCASGII--KPEAAQFYVDPIREFYEAFVIY 86
Query: 180 SFLSLCYEYLGGEGNIMS 197
+F + LGGE NI++
Sbjct: 87 TFFTFLTLLLGGERNIIT 104
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 2 HLKWYTNPAEQRWIIRILFIVPIYALHSLVSLLFFNNENYYIYFFTIRDCYEA 54
HL Y P EQR IRIL +VPI+++ ++ E Y IR+ YEA
Sbjct: 32 HLLNYRKPYEQRLSIRILLLVPIFSVSCASGII--KPEAAQFYVDPIREFYEA 82
>sp|Q5PAA8|PURA_ANAMM Adenylosuccinate synthetase OS=Anaplasma marginale (strain St.
Maries) GN=purA PE=3 SV=2
Length = 426
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 65 IPPQEILAEMTSTSTVAPTIFPFIQPVHPIFLQTKTAQGLASAFVGA 111
+ P EI+ E+T +AP + PF++PV P + + QG F GA
Sbjct: 181 VTPHEIMDELTQ---IAPKVLPFMKPV-PEIIVSLIKQGKTVLFEGA 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.143 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,813,297
Number of Sequences: 539616
Number of extensions: 2953582
Number of successful extensions: 7466
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 7397
Number of HSP's gapped (non-prelim): 51
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)